BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000607
(1396 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547506|ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative [Ricinus communis]
Length = 1388
Score = 1892 bits (4902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 907/1375 (65%), Positives = 1116/1375 (81%), Gaps = 5/1375 (0%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
+YQLEALE A++QNTIVFLETGSGKTLIAIMLLRSYA+LLRKPSPF+AVFLVP+VVLV Q
Sbjct: 11 SYQLEALEKAIQQNTIVFLETGSGKTLIAIMLLRSYAHLLRKPSPFIAVFLVPQVVLVKQ 70
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
QAEA++ HTDL VGKYWG+MGVDFWD +WK+++ ++EVLVMTPQILLDGLR S+FKL+
Sbjct: 71 QAEAVETHTDLTVGKYWGEMGVDFWDAGSWKQQIEQYEVLVMTPQILLDGLRHSFFKLDC 130
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYW 203
IKVLI DECHHARGKH YACI+TEFYHR L DS LPRIFGMTASPIKSK + SE YW
Sbjct: 131 IKVLIFDECHHARGKHPYACILTEFYHRQLTYRDSALPRIFGMTASPIKSKGAKSELAYW 190
Query: 204 QKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELK 263
+I +LE +M SKVYTCASESVL+ FIPFST KFKFYK +IP+A+Y LA+ L +++ K
Sbjct: 191 TEIRELENIMYSKVYTCASESVLAEFIPFSTPKFKFYKPMDIPYAIYASLAENLKILKSK 250
Query: 264 HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQ 323
+ +L+ LDL +A E K++SK++STL+YCL ELGVWLALKAA+ +SC+ES+FF+ +
Sbjct: 251 YECNLKLLDLTDAVVESTSKRISKMHSTLMYCLDELGVWLALKAAQILSCHESEFFSCGK 310
Query: 324 LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYR 383
LD GE I+K+FG +ASQAL + SG +WSIG++++ ++++GLLT KI CLI+SLL+YR
Sbjct: 311 LDISGENIVKEFGLNASQALDNCINSGPKWSIGENAEADIEAGLLTTKIFCLIDSLLDYR 370
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCT-WKTKYIAGNNSGIQCQSRKKQNEIVE 442
+ D+RCIIFV RVI AIVLQ+LL ELLPR+ + WKT+YIAGNN +Q QSRK QNEIVE
Sbjct: 371 DIRDLRCIIFVNRVIAAIVLQTLLGELLPRYNSGWKTQYIAGNNFRLQSQSRKTQNEIVE 430
Query: 443 EFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS 502
EFR G VN+IVATSILEEGLDVQSCNLV+ FDPS TV SFIQSRGRARMQNSDYLLMVKS
Sbjct: 431 EFREGKVNIIVATSILEEGLDVQSCNLVVRFDPSTTVSSFIQSRGRARMQNSDYLLMVKS 490
Query: 503 GDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVS 562
GD +T SRLENYLASG+ MRKE + H S+PCSP+ + + ++Y VEST + TL+SSVS
Sbjct: 491 GDVSTHSRLENYLASGDLMRKESIRHGSVPCSPIRSEFHEGEYYFVESTNALVTLTSSVS 550
Query: 563 LIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEA 622
LIYFYCSRLPSDGYFKPTP+ I+KEM CTL LP +C I T+ +GN+K +KQ ACLEA
Sbjct: 551 LIYFYCSRLPSDGYFKPTPRCLIDKEMERCTLLLPKSCSIHTISVEGNVKIIKQKACLEA 610
Query: 623 CKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCY 682
CK+LH+IGAL DNL+PDIVVE+ AQ+ GN PY+ EHP+YFPPELV Q+ Q ++ Y+CY
Sbjct: 611 CKQLHKIGALNDNLVPDIVVEETVAQQSGNGPYDDEHPMYFPPELVGQASQKSEAKYYCY 670
Query: 683 LIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQV 742
LIEL Q+F Y+I N VLAMR+ELES+I ++ DLE +RG L V LK++G I L P V
Sbjct: 671 LIELNQNFVYEIPVHNFVLAMRSELESDILGLDLDLEADRGLLMVKLKYIGEIHLTPETV 730
Query: 743 LLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQL----IDWKTVAT 798
++CR+F IT+ +V++DH++DKL +IL G +LR+ EIDYLLLP G IDW V +
Sbjct: 731 IMCRKFLITVLKVLVDHSIDKLEDILKGLKLRNGPEIDYLLLPLVGSCQKPSIDWDAVTS 790
Query: 799 VLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLN 858
VLF +N + + NC A ++ TK G +C C + NS+V TPHNG++Y I G L HLN
Sbjct: 791 VLFSYENVLEDHKNCPLKEAACVIQTKDGVVCKCTLQNSVVYTPHNGKVYFIDGTLDHLN 850
Query: 859 ANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK 918
+SL NG +Y ++Y++++GI+L FD++ LL GR IF +QNYL++CRQQK+K+
Sbjct: 851 GHSLLELRNGYHKSYMEYYKDQHGIKLHFDQQLLLRGRHIFPLQNYLNRCRQQKEKDSQN 910
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 978
ELPPELC I M+PIS+S+FYSFTFVPSIMHRL+SLL+A NLK + LDHCMQ+V IPT
Sbjct: 911 AYVELPPELCHIFMSPISISSFYSFTFVPSIMHRLESLLIASNLKKLHLDHCMQSVAIPT 970
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
IKVLEAITTKKCQE FHLESLETLGDSFLKYA QQLFKTYQN+HEGLLS+KK+++ISNA
Sbjct: 971 IKVLEAITTKKCQEKFHLESLETLGDSFLKYAVGQQLFKTYQNHHEGLLSIKKDKLISNA 1030
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
LC+LGC+ K+PGFIR ESFDPK W+IP + SG Y L+++ L NGRK+Y+ R+K+K K
Sbjct: 1031 TLCRLGCDSKIPGFIRNESFDPKNWLIPDEISGCYSLSEEILSNGRKMYIKRRRKLKEKM 1090
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLL 1158
+ADVVEALIGA+LSTGGE GL+FLD IGIK DF+N+PY+R F+++ E+ VN+ HLESLL
Sbjct: 1091 IADVVEALIGAYLSTGGEIAGLLFLDWIGIKADFLNMPYERGFEMNPEKYVNICHLESLL 1150
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
YSFRDP LLVEALTHGSYMLPEIPRCYQRLEFLGD+VLDYLITV+LY KYPG+SPG LT
Sbjct: 1151 KYSFRDPCLLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITVHLYEKYPGMSPGLLT 1210
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSF 1278
DMRSASVNNDCYA S+V+ GLHK+ILHAS +L+K I TV + ++ S STFGWES SF
Sbjct: 1211 DMRSASVNNDCYAQSAVREGLHKYILHASQKLHKDIVSTVANCKEFSSESTFGWESEISF 1270
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PK LGD+IESLAGAIFVDSG N+EVVF SIRPLLEP+ITPET+R HP RELTE CQK HF
Sbjct: 1271 PKVLGDVIESLAGAIFVDSGYNKEVVFNSIRPLLEPLITPETIRLHPTRELTELCQKQHF 1330
Query: 1339 SMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASF 1393
+KPV SR +G + VTVEV+ANG +F+HT A++KTAK++A KEVL++L+ S
Sbjct: 1331 DRRKPVVSRNNGMSCVTVEVEANGVVFKHTSAAAERKTAKRLASKEVLRALKDSL 1385
>gi|224101241|ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 1875 bits (4857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 933/1460 (63%), Positives = 1131/1460 (77%), Gaps = 71/1460 (4%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
MEPVSM+ DTT+++ AD LPFAR+YQLEALE ALK NTIVFLETGSGKTLIAIMLLRSYA
Sbjct: 1 MEPVSMDIDTTQQLPADPLPFARSYQLEALEKALKHNTIVFLETGSGKTLIAIMLLRSYA 60
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
YLLRKPS F+AVFLVP+VVLV QQA A++MHTDLKVG YWG+MGVDFW+ ATWK+E+ KH
Sbjct: 61 YLLRKPSRFIAVFLVPQVVLVRQQAGAVEMHTDLKVGMYWGEMGVDFWNAATWKKEIEKH 120
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
EVLVMTPQILL+GLR S+FKL++IKV+I+DECHH RGKH YA IMTEF+H L++G +L
Sbjct: 121 EVLVMTPQILLNGLRHSFFKLDLIKVMIVDECHHTRGKHPYASIMTEFFHCELKSGHHDL 180
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSK------------------------ 216
PRIFGMTASPIKSK ++SE YWQ+I +LE +MNSK
Sbjct: 181 PRIFGMTASPIKSKGANSELYYWQQIRELEDIMNSKLLSPFAFGSLLQDEDDPHGTFQMH 240
Query: 217 -------------------------VYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYT 251
+YTC SES L+ FIPFST KF FY++ +IP ++
Sbjct: 241 STNIHVISHSCSKVFENCIPGTRHMIYTCVSESALAEFIPFSTPKFLFYEHMKIPDGIFA 300
Query: 252 HLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
L EL + KH LE LDLNE+ A I K+SK++S L++CL ELGVWLA +AA+ +
Sbjct: 301 SLLKELGNLRTKHEHMLEQLDLNESAAVSICNKISKVHSALMFCLEELGVWLAFQAAQFL 360
Query: 312 S-C-YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT 369
S C + DF + +LD GETI+K F DAS A+ G E SIGD+ K +L +GLLT
Sbjct: 361 SHCDTDGDFISGGKLDVSGETIVKNFCQDASLAISNCFSDGQECSIGDNIKAHLGAGLLT 420
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI 429
KI+CL+ESLL+YR +++IRCI+FVERVITAIVL+SLLS+LLP+H +WKTKYIAGNNSG+
Sbjct: 421 SKILCLVESLLQYRDLKEIRCIVFVERVITAIVLESLLSKLLPKHGSWKTKYIAGNNSGL 480
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
Q Q+RK QNEIVEEFR+G+VN+IVATSILEEGLDVQSCNLVI FDPS TV SFIQSRGRA
Sbjct: 481 QSQTRKIQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPSATVSSFIQSRGRA 540
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
RMQNSDYLLMVK GD +T +RLENYLASG+ MR+E L HAS+PCSPL + + ++FY VE
Sbjct: 541 RMQNSDYLLMVKRGDFSTHARLENYLASGDIMRRESLRHASIPCSPLLDEL-DDEFYRVE 599
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQG 609
TG + +LSSSVSLIYFYCSRLPSDGYFKP P+ I+KE CTL+LP + P+QT+ QG
Sbjct: 600 GTGAVVSLSSSVSLIYFYCSRLPSDGYFKPAPRCIIDKETMTCTLHLPKSSPVQTICVQG 659
Query: 610 NIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVN 669
NIKTLKQ ACLEACKKLH GALTDNL+PDIV+E+ A+ GNE Y+ E PIY PPELV+
Sbjct: 660 NIKTLKQKACLEACKKLHVSGALTDNLVPDIVMEEAVAEDVGNERYDDEQPIYLPPELVS 719
Query: 670 QSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESE-IKKVNFDLEVERGRLTVN 728
+ P++ K Y+CYLIEL Q+F YDI ++VL +RTELES+ I+ + FDLE ERG LTVN
Sbjct: 720 RGPRNLKTKYYCYLIELNQNFAYDIPVHDVVLVVRTELESDVIRSMGFDLEAERGLLTVN 779
Query: 729 LKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPS-- 786
L+++G I L VLLCRRFQITLF+V++DH+++KL E+L+G +L EIDY LLP+
Sbjct: 780 LRYIGDIDLERVLVLLCRRFQITLFKVLLDHSVNKLKEVLEGLDLGSGAEIDYFLLPAFR 839
Query: 787 --TGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHN 844
+ I+W +++VLF N + + NCS NA +V TK GP+C C + NSLVCTPHN
Sbjct: 840 SCSQPSINWAPISSVLFSYKN--EEHFNCSRNGNAHVVQTKCGPVCACVLQNSLVCTPHN 897
Query: 845 GQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEER------------YGIQLCFDREPL 892
G IYCITGV LN NSL +G TYK+++ +R +GIQL F+REPL
Sbjct: 898 GNIYCITGVFEDLNGNSLLKMGDGGAITYKEYFAKRPMSDLKLTLDFRHGIQLLFNREPL 957
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
L G+ IF V N L++CR+QK+K ELPPELC II++PIS+ST YS+TF+PSIMHR
Sbjct: 958 LKGKHIFPVHNLLNRCRKQKEKASKNTHVELPPELCEIILSPISISTLYSYTFIPSIMHR 1017
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAAS 1012
L+SLL+AVNLK M DH +Q+V IP++KVLEAITT KCQE+F+LESLETLGDSFLKYAAS
Sbjct: 1018 LESLLIAVNLKKMHSDHYLQHVNIPSMKVLEAITTNKCQENFNLESLETLGDSFLKYAAS 1077
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
QQLFK YQN+HEGLLS KK++IISNAALC+ GC KL GFIR ESFDPK+WIIPG GS
Sbjct: 1078 QQLFKIYQNHHEGLLSFKKDKIISNAALCRRGCNHKLQGFIRNESFDPKLWIIPGGKLGS 1137
Query: 1073 YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 1132
L+++ L GRKIY+ GR+KVKSKT+ADVVEALIGA+LSTGGE L+F+D IGIKVDF
Sbjct: 1138 DFLSEEPLSKGRKIYIRGRRKVKSKTIADVVEALIGAYLSTGGEVTALLFMDWIGIKVDF 1197
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
+N PY+R Q+ AE+ VNVR+LESLLNYSF DPSLLVEALTHGSYMLPEIPRCYQRLEFL
Sbjct: 1198 MNTPYERHIQLQAEKFVNVRYLESLLNYSFNDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1257
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDAVLDYLIT+++Y +YPG+SPG LTD+RSASVNNDCYALS+VK GL +HILHASH+L+K
Sbjct: 1258 GDAVLDYLITLHMYKEYPGMSPGLLTDLRSASVNNDCYALSAVKVGLDRHILHASHDLHK 1317
Query: 1253 RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
I TV ++ SL STFGWES T+FPK LGD+IESLAGAI VDSG N+EVVF+SIRPLL
Sbjct: 1318 HIVATVKKIQEFSLESTFGWESETAFPKVLGDVIESLAGAILVDSGYNKEVVFESIRPLL 1377
Query: 1313 EPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDA 1372
EP+ITPET+R PVREL E CQ+ HF KKP+ SR A+VT+EV+ANG +F+HT A
Sbjct: 1378 EPLITPETLRLQPVRELNELCQRQHFDYKKPIVSRNGRNASVTIEVEANGLIFKHTATVA 1437
Query: 1373 DKKTAKKVACKEVLKSLRAS 1392
DK TAKK+A KEVLK+L+ S
Sbjct: 1438 DKTTAKKLASKEVLKALKES 1457
>gi|224109196|ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 1862 bits (4823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1400 (65%), Positives = 1103/1400 (78%), Gaps = 12/1400 (0%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
MEPVS++ DTT+++ AD LPFAR+YQLEALE ALKQNTIVFLETGSGKTLIA MLLRSYA
Sbjct: 1 MEPVSVDIDTTQQLPADPLPFARSYQLEALEQALKQNTIVFLETGSGKTLIATMLLRSYA 60
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
+LLRKPS F+AVFLVP+V LV QQA ++MHTDL VG YWGDMG+DF ATWK+E+ KH
Sbjct: 61 HLLRKPSRFIAVFLVPEVFLVRQQAGVVRMHTDLNVGMYWGDMGIDFSHAATWKQEIDKH 120
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
EVLVMT QILL+GLR YFKL+ IKVLI DECHHARG H YACIMTEF+HR L +G +L
Sbjct: 121 EVLVMTHQILLNGLRQGYFKLDFIKVLIFDECHHARGNHPYACIMTEFFHRELRSGHHDL 180
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
PRIFGMTAS IKSK ++SE Y Q+I +LE +MNSKVYTCASE+VL+ FIP A+F FY
Sbjct: 181 PRIFGMTASLIKSKGANSESYYRQQICELENIMNSKVYTCASETVLAEFIPSPAAEFLFY 240
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG 300
+ +IP +Y L +EL ++ KH L+ LDL+E+ AE + K+SK++S L++C ELG
Sbjct: 241 EPMKIPDGIYACLEEELGNLKAKHELLLKQLDLSESAAESVHSKISKVHSALMFCSGELG 300
Query: 301 VWLALKAAETISC--YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD 358
VWLA +AA +S +SDF AW ++D GETI+KKF DAS LV AE IGD+
Sbjct: 301 VWLAFQAARFLSHSDTDSDFIAWGKVDVSGETIVKKFCWDAS--LVISNCFSAECCIGDN 358
Query: 359 SKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
++ ++ +GL+T K++CLI++LL+YR ++DIRCI+FVERVITA+VL+SLL ELLP+H +WK
Sbjct: 359 TEADVGAGLITAKVLCLIKTLLQYRDLKDIRCIVFVERVITAVVLESLLRELLPKHSSWK 418
Query: 419 TKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
TKYIAGNNSG+Q Q+R+ QNEIVEEFR+G+VN+IVATSILEEGLDVQSCNLVI FDP +
Sbjct: 419 TKYIAGNNSGLQSQTRQMQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPPSS 478
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNN 538
V SFIQSRGRARMQNSDYLLMVK+ DSTT SRLENYL+S MR+E L +S CS +
Sbjct: 479 VSSFIQSRGRARMQNSDYLLMVKTEDSTTHSRLENYLSSSEIMRRESLRRSSTSCSAPQS 538
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPN 598
+Y ++FY VE TG + TLSSSVSLIYFYCSRLPSDGYFKP P I+KE CTL+LP
Sbjct: 539 ELYEDEFYSVEGTGAVVTLSSSVSLIYFYCSRLPSDGYFKPAPICIIDKEKETCTLHLPK 598
Query: 599 NCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE 658
+ PIQ + QGN K LKQ ACLEACK+LH IGALTDNL+PD+V E+ AQ+ NE Y+ E
Sbjct: 599 SSPIQNICVQGNNKNLKQKACLEACKQLHLIGALTDNLVPDVVEEEAVAQEIRNERYDDE 658
Query: 659 HPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEI-KKVNFD 717
PIY PPEL +Q P++ K Y+CYLIEL Q F+Y + +IVL MRTELES++ + F+
Sbjct: 659 QPIYLPPELASQGPRNLKTKYYCYLIELNQKFDYGVPVHDIVLVMRTELESDVLSSMGFE 718
Query: 718 LEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNL 777
LE ERG L V+L+++G I L VLLCRRFQITLF V++ ++KL E+L G EL +
Sbjct: 719 LEAERGLLAVSLRYIGDIYLDQVPVLLCRRFQITLFEVLIHREVNKLEEVLKGLELGTGV 778
Query: 778 EIDYLLLPS----TGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK 833
+DY LLP+ + IDW+ +++VLF N + + NCS+ NA +VHTK GP+CTC
Sbjct: 779 VMDYFLLPAIRSRSQPSIDWEPISSVLFSYKN--EDHFNCSSKGNAHVVHTKGGPVCTCV 836
Query: 834 IHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHY-EERYGIQLCFDREPL 892
+ NSLVCTPHNG +Y ITG LN SL NGS TYK+H+ + R IQL FD+EPL
Sbjct: 837 LQNSLVCTPHNGNVYFITGASEDLNGRSLLKLRNGSAITYKEHFAKRRNSIQLLFDQEPL 896
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
L GR IF V N+L++CR +K+KE +LPPELC II++P+S+ST YS+TF+PSIMHR
Sbjct: 897 LEGRHIFPVHNFLNRCRTKKEKESKNAHVDLPPELCDIILSPVSISTLYSYTFIPSIMHR 956
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAAS 1012
L+SLL+AVNLK M DHCMQNV IP +KVLEAITTKKCQE FHLESLETLGDSFLKYAAS
Sbjct: 957 LESLLIAVNLKKMHSDHCMQNVDIPAMKVLEAITTKKCQEKFHLESLETLGDSFLKYAAS 1016
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
QQLFK YQN+HEGLLS+KKE+IISNAALC+ GC+ KLPGFIR ESFDPK+W+IPGD GS
Sbjct: 1017 QQLFKLYQNHHEGLLSMKKEKIISNAALCRRGCDHKLPGFIRNESFDPKLWMIPGDKCGS 1076
Query: 1073 YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 1132
L+++ L RKIYV GR+KVKSKTVADVVEALIGA+LSTGGE + L F+D IGIKVDF
Sbjct: 1077 DLLSEEPLSECRKIYVRGRRKVKSKTVADVVEALIGAYLSTGGEVLALFFMDWIGIKVDF 1136
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
+ VPY+R FQ+ AE+ VNVR+LESLLNYSFRDPSLLVEALTHGSYMLPEIP CYQRLEFL
Sbjct: 1137 MIVPYERHFQLQAEKFVNVRYLESLLNYSFRDPSLLVEALTHGSYMLPEIPSCYQRLEFL 1196
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDAVLDYLIT++LY +YPG+SPG LTD+RSASVNNDCYA S+VK LHKHILH S +L+K
Sbjct: 1197 GDAVLDYLITMHLYKEYPGMSPGLLTDLRSASVNNDCYAQSAVKGDLHKHILHTSQDLHK 1256
Query: 1253 RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
I T + F+K SLGSTFGWES TSFPK LGD+IESLAGAI VDSG N+E+VFQSIRPLL
Sbjct: 1257 HIVETAEIFQKSSLGSTFGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVFQSIRPLL 1316
Query: 1313 EPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDA 1372
EP+ITP T+R HP REL+E CQK HF KK V S A++T+ V ANG F+HT A
Sbjct: 1317 EPLITPATVRLHPARELSELCQKQHFDYKKSVVSYNGRNASITIVVGANGVTFKHTATAA 1376
Query: 1373 DKKTAKKVACKEVLKSLRAS 1392
DKKTAKK+A KEVLKSL+ S
Sbjct: 1377 DKKTAKKLASKEVLKSLKES 1396
>gi|359476600|ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 1796 bits (4651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 902/1403 (64%), Positives = 1105/1403 (78%), Gaps = 18/1403 (1%)
Query: 1 MEPVSMESDTTEEV--SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS 58
MEPV M V + D LPFAR+YQ+EALE A+KQNTIVFLETGSGKTLIAIMLLR
Sbjct: 1 MEPVKMIGADGNNVGQTVDPLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRY 60
Query: 59 YAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS 118
YA+LLRKPSPF+AVFLVPKVVLVPQQAEA+KMHTDLKVG YWGDMGVDFWD ATW++E
Sbjct: 61 YAHLLRKPSPFIAVFLVPKVVLVPQQAEAVKMHTDLKVGTYWGDMGVDFWDAATWRKEQD 120
Query: 119 KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS 178
KHEVLVMTP ILL+GLR S+FKL+MIKVLI DECHHARGK YACIM EFYH + + +S
Sbjct: 121 KHEVLVMTPAILLNGLRHSFFKLDMIKVLIFDECHHARGKDPYACIMKEFYHEQVRSNNS 180
Query: 179 NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK 238
NLPRIFGMTASPIK+K ++ + + + +LE LMNSK+YT SE+VL+ F+PFST K
Sbjct: 181 NLPRIFGMTASPIKTK-GVNDLMHSKNMIELENLMNSKIYTSVSEAVLAEFVPFSTPKLT 239
Query: 239 FYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSE 298
YK +IP AL+ ++A +L +++ K+ SLE+L+L E+ E RKK+SK+ S L+CL++
Sbjct: 240 HYKDKDIPSALFENVAHQLEILKNKYEHSLESLNLMESTKESARKKISKLFSAFLFCLND 299
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD 358
LG+WLALKAAE C + D W QLD GE IIK F DA + + TY+PS E S+GDD
Sbjct: 300 LGLWLALKAAEFSFCDDMDICCWGQLDLSGEEIIKNFNKDAYKVISTYLPSDRELSVGDD 359
Query: 359 SKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ + +SG LT K++CL+ SLL+YR ++++RCI+FVERVITAIVLQ LLS+LLP+ W+
Sbjct: 360 LEADAESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWE 419
Query: 419 TKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
YIAGN S +Q QSR+ QN +VEEFR+G+VNVIV+TSILEEGLDVQSCNLVI FDPS T
Sbjct: 420 AGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSAT 479
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNN 538
VCSFIQSRGRARMQNSDYLLMVKSGD T SRL YL SG MR+E L +ASLPC+PL +
Sbjct: 480 VCSFIQSRGRARMQNSDYLLMVKSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKS 539
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPN 598
+ E+FY VEST I TLSSS+ L+YFYCSRLPSDGYFKPTP+ IN++MG CT+Y P
Sbjct: 540 SLDDEEFYWVESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDMGTCTIYHPK 599
Query: 599 NCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE 658
+CPIQTV +GNIKTLKQ ACLEACK+LH+ GALTDNL+P IV E+ + N PY+ E
Sbjct: 600 SCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEEAIVAQDENMPYDDE 659
Query: 659 HPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDL 718
Y+PPEL+N S +D YHCYLIEL Q + Y++S + IVLA+R+ELE ++ VNFDL
Sbjct: 660 QATYYPPELINPSLKDPVTPYHCYLIELDQKYEYEVSPQGIVLAVRSELEYDVGNVNFDL 719
Query: 719 EVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLE 778
+V+RG +TV++ ++G I L QVL+CR+FQITL RV++D +DK + D ++L ++
Sbjct: 720 QVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRVLIDRAIDK--GVFDRYDLGNDQM 777
Query: 779 IDYLLLPSTG-----QLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK 833
+DYL+LPST ++DWK + +V F +N S H M C F R+ HTKSG +C+C
Sbjct: 778 VDYLMLPSTNSREIPSIVDWKCLGSVFFSHENASNH-MGC---FFPRM-HTKSGFVCSCT 832
Query: 834 IHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLL 893
+ NS+V TPH Q YCITG+LG LN NS + NG + TYK++Y R+GI+L FD E LL
Sbjct: 833 LKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGLLTYKEYYRLRHGIELQFDGEKLL 892
Query: 894 NGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRL 953
GRR+F VQNYL +CRQQK+KE S + ELPPELC I M+PIS+S YSF+ +PSIMHR+
Sbjct: 893 KGRRMFVVQNYLQRCRQQKEKELSNTTVELPPELCVIFMSPISISIIYSFSLIPSIMHRI 952
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
+SLLLAVNLKN+ L++C QN IPT KVLEAITTK CQE FHLESLETLGDSFLKYAASQ
Sbjct: 953 ESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTKHCQEGFHLESLETLGDSFLKYAASQ 1011
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSY 1073
QLFKT+QN+HEGLLSVKKERIISNA+LCKLGC++KLPGFIR ESFDPK WII GD S S+
Sbjct: 1012 QLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQSRSH 1071
Query: 1074 ELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV 1133
++ L + RKIYV+ R+K+KSK +ADVVEALIGAFLSTGGE LIF+ +GI VDFV
Sbjct: 1072 VFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDFV 1131
Query: 1134 NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1193
VPY+R F V +R VNV +LES+LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG
Sbjct: 1132 KVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1191
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
DAVLDYL+T++LY+KYPG+SPG LTD+RSASVNNDCYA S+VK LH+HILH+S EL++
Sbjct: 1192 DAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRH 1251
Query: 1254 INITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
I +TV +F+KL + STFGWES +SFPK LGD+IESLAGAI VDS N+EVVFQSIRPLLE
Sbjct: 1252 IVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLE 1311
Query: 1314 PMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDAD 1373
P+ITPET++ HP REL E CQK H+ +K+ V S+ +GKA+VT+EV+ANG +HT +D
Sbjct: 1312 PLITPETVKLHPARELGELCQKEHYDIKRVVVSQ-NGKASVTIEVEANGAKHKHTS-TSD 1369
Query: 1374 KKTAKKVACKEVLKSLRASFPGT 1396
K+TA K+A KEVLKSL+ S T
Sbjct: 1370 KRTATKLASKEVLKSLKESIAQT 1392
>gi|449442659|ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 1393
Score = 1776 bits (4600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 878/1397 (62%), Positives = 1099/1397 (78%), Gaps = 18/1397 (1%)
Query: 5 SMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR 64
+ME++ E++ AD L FAR+YQLE LE ALKQNT+VFLETGSGKTLIAIMLLRS+A+ LR
Sbjct: 4 NMETEN-EQLVADPLSFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLR 62
Query: 65 KPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLV 124
KPSPFVAVFLVP+VVLV QQAEA+KMHTDL VG Y+GDMGVDFWDGA WK E+ KHEVLV
Sbjct: 63 KPSPFVAVFLVPQVVLVTQQAEALKMHTDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLV 122
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIF 184
MTP ILL+GLR S+F+L+MIKVLILDECHHARGKH YACIMTEFYH+ L G S+LPRIF
Sbjct: 123 MTPAILLNGLRHSFFRLSMIKVLILDECHHARGKHPYACIMTEFYHQQLSLGKSDLPRIF 182
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE 244
GMTASPIKSK +SE +YWQ I +LE+L+NSKVYT +SES L+NF+P ST KFKFY +
Sbjct: 183 GMTASPIKSKGGNSELNYWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFYIRKD 242
Query: 245 IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
IP+ALY LA+ L +++ KH +SLEN DLN + E RK++SK L+YCL ELG+WL
Sbjct: 243 IPYALYEQLANALKVLKSKHEQSLENSDLNPSNVEPTRKRISKAFLALMYCLDELGLWLT 302
Query: 305 LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW-SIGDDSKFNL 363
KAAE++S E DF WE LD FGE I+K F SDA + L V SG + SIGD+ + ++
Sbjct: 303 WKAAESLSWMEDDFSPWETLDIFGEAIVKSFCSDALKLLANPVKSGCSYGSIGDNLEADM 362
Query: 364 DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
+GL+T K+VCLI SLLEYR +EDIRCI+FVER+++A+ LQ+LLS LLP++ WKTKYIA
Sbjct: 363 AAGLMTPKVVCLIASLLEYRSIEDIRCIVFVERIVSAVALQTLLSLLLPKYTCWKTKYIA 422
Query: 424 GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
G+ SG+Q QS+KKQNEIVEEFR G VN+IVATSILEEGLDVQSCNLVI FDPS TVCSFI
Sbjct: 423 GSTSGLQTQSKKKQNEIVEEFRCGKVNIIVATSILEEGLDVQSCNLVIRFDPSSTVCSFI 482
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
QSRGRARM+NSDY+LMVKSGDSTT SRL+ YLASG MR E L HASLPC P + Y E
Sbjct: 483 QSRGRARMKNSDYILMVKSGDSTTLSRLQRYLASGEIMRNESLCHASLPCVPFRSD-YDE 541
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQ 603
+ Y+VESTG + TLSSSV LIYFYCSRLPSD YFKPTP++ +KE CTL+LP + P+Q
Sbjct: 542 ESYYVESTGAVVTLSSSVGLIYFYCSRLPSDCYFKPTPRW--DKET--CTLHLPKSSPLQ 597
Query: 604 TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYF 663
T ++ + K KQ ACLEACK+LH+ GALTDNL+P IV E+ AQ+ GN+P + E PIY
Sbjct: 598 TFSSKDDAKYSKQRACLEACKQLHKCGALTDNLVPQIVAEESVAQEIGNKPLDDEQPIYV 657
Query: 664 PPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERG 723
PPE V+ P ++ + YHCYLIELKQ+F+YDISA NIVLAMRTELE E++ + DL+V+RG
Sbjct: 658 PPEFVHCCPHNSSVVYHCYLIELKQNFHYDISAHNIVLAMRTELEFEVQSMCHDLDVDRG 717
Query: 724 RLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN----LDKLNEILDGFELRDNLEI 779
VN K++G I+L P QVLL R+FQ T+F+V+++H L + NEI G D +
Sbjct: 718 SFDVNFKYVGIIKLSPEQVLLSRQFQRTIFKVLLNHTWTNKLSENNEICLG----DGPRV 773
Query: 780 DYLLLPSTG-QLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSL 838
DYLLLPSTG +LI W+ V +VL H S+ + V TKSG +C C++ NS+
Sbjct: 774 DYLLLPSTGGELISWEIVLSVLVSSQEYCVHRGISSSKDVSYDVPTKSGLVCICRLQNSV 833
Query: 839 VCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRI 898
V TPHNG +YCIT VL LN NSL + YK++Y+ R+GI L F+++PLL G++I
Sbjct: 834 VYTPHNGHVYCITSVLSELNGNSLLKIRKNEMMAYKEYYKVRHGIDLRFEKQPLLRGKKI 893
Query: 899 FHVQNYLSKCRQQKQKEPSKISF-ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
F V NY+ + R+ K++ S+ S ELPPELC IIM+PIS++T YS++F+P IMHRL+S+L
Sbjct: 894 FPVHNYIKRFRKHKEQGESRNSLVELPPELCSIIMSPISVNTLYSYSFLPFIMHRLESML 953
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
+A NLK + DHCMQN IPT KVLEAITTKKCQE F+LESLETLGDSFLKYA Q LF+
Sbjct: 954 IASNLKKLNSDHCMQN-DIPTTKVLEAITTKKCQEKFNLESLETLGDSFLKYATGQHLFR 1012
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELND 1077
T+QN+HEGLL++KK+RI+SNAAL + GCE K+ GFIR E+FDP+ W IPGD Y+L +
Sbjct: 1013 TFQNDHEGLLTLKKDRIVSNAALRRRGCEHKISGFIRDEAFDPQNWDIPGDTHEVYQLRE 1072
Query: 1078 DSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY 1137
+ LF+GRK+YV ++K+KSK +ADVVEALIGA+LSTGGE + FL+RIGI+V+F VPY
Sbjct: 1073 EVLFSGRKVYVQRKRKIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFDFVPY 1132
Query: 1138 QRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
+R F+V +L+NV HLESLL Y+F D SLL+EA+THGSYMLPEIPRCYQRLEFLGD+VL
Sbjct: 1133 ERPFRVDVHKLINVGHLESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVL 1192
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
DY ITV+LYNKYPG++P LTDMRSASV+NDCY+ +++K LHK ILH SH+L+K I+
Sbjct: 1193 DYAITVHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSHDLHKHISSA 1252
Query: 1258 VDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
V +FE LS +T+GWES SFPK LGD+IESLAGAI+VDSG ++E+VF+SIRPLLEP+++
Sbjct: 1253 VQNFETLSSEATYGWESEISFPKVLGDVIESLAGAIYVDSGYDKEIVFRSIRPLLEPLVS 1312
Query: 1318 PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTA 1377
PET++ HP REL E CQK ++ +KK V SR++G++ VTVEV+ NGR+F+HT + D++T
Sbjct: 1313 PETLKKHPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGRIFKHTEISLDRETG 1372
Query: 1378 KKVACKEVLKSLRASFP 1394
+KVA KEVLKSL+ ++P
Sbjct: 1373 EKVASKEVLKSLKEAYP 1389
>gi|297735235|emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 1730 bits (4480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 865/1348 (64%), Positives = 1063/1348 (78%), Gaps = 15/1348 (1%)
Query: 54 MLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATW 113
MLLR YA+LLRKPSPF+AVFLVPKVVLVPQQAEA+KMHTDLKVG YWGDMGVDFWD ATW
Sbjct: 1 MLLRYYAHLLRKPSPFIAVFLVPKVVLVPQQAEAVKMHTDLKVGTYWGDMGVDFWDAATW 60
Query: 114 KEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLL 173
++E KHEVLVMTP ILL+GLR S+FKL+MIKVLI DECHHARGK YACIM EFYH +
Sbjct: 61 RKEQDKHEVLVMTPAILLNGLRHSFFKLDMIKVLIFDECHHARGKDPYACIMKEFYHEQV 120
Query: 174 ETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFS 233
+ +SNLPRIFGMTASPIK+K ++S + + +LE LMNSK+YT SE+VL+ F+PFS
Sbjct: 121 RSNNSNLPRIFGMTASPIKTKGTTSTWSCGKNMIELENLMNSKIYTSVSEAVLAEFVPFS 180
Query: 234 TAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
T K YK +IP AL+ ++A +L +++ K+ SLE+L+L E+ E RKK+SK+ S L
Sbjct: 181 TPKLTHYKDKDIPSALFENVAHQLEILKNKYEHSLESLNLMESTKESARKKISKLFSAFL 240
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
+CL++LG+WLALKAAE C + D W QLD GE IIK F DA + + TY+PS E
Sbjct: 241 FCLNDLGLWLALKAAEFSFCDDMDICCWGQLDLSGEEIIKNFNKDAYKVISTYLPSDREL 300
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
S+GDD + + +SG LT K++CL+ SLL+YR ++++RCI+FVERVITAIVLQ LLS+LLP+
Sbjct: 301 SVGDDLEADAESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPK 360
Query: 414 HCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
W+ YIAGN S +Q QSR+ QN +VEEFR+G+VNVIV+TSILEEGLDVQSCNLVI F
Sbjct: 361 LSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRF 420
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC 533
DPS TVCSFIQSRGRARMQNSDYLLMVKSGD T SRL YL SG MR+E L +ASLPC
Sbjct: 421 DPSATVCSFIQSRGRARMQNSDYLLMVKSGDDKTLSRLRTYLDSGKVMREESLRNASLPC 480
Query: 534 SPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICT 593
+PL + + E+FY VEST I TLSSS+ L+YFYCSRLPSDGYFKPTP+ IN++MG CT
Sbjct: 481 APLKSSLDDEEFYWVESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDMGTCT 540
Query: 594 LYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE 653
+Y P +CPIQTV +GNIKTLKQ ACLEACK+LH+ GALTDNL+P IV E+ + N
Sbjct: 541 IYHPKSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEEAIVAQDENM 600
Query: 654 PYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKK 713
PY+ E Y+PPEL+N S +D YHCYLIEL Q + Y++S + IVLA+R+ELE ++
Sbjct: 601 PYDDEQATYYPPELINPSLKDPVTPYHCYLIELDQKYEYEVSPQGIVLAVRSELEYDVGN 660
Query: 714 VNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL 773
VNFDL+V+RG +TV++ ++G I L QVL+CR+FQITL RV++D +DK + D ++L
Sbjct: 661 VNFDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRVLIDRAIDK--GVFDRYDL 718
Query: 774 RDNLEIDYLLLPSTG-----QLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGP 828
++ +DYL+LPST ++DWK + +V F +N S H M C F R+ HTKSG
Sbjct: 719 GNDQMVDYLMLPSTNSREIPSIVDWKCLGSVFFSHENASNH-MGC---FFPRM-HTKSGF 773
Query: 829 LCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFD 888
+C+C + NS+V TPH Q YCITG+LG LN NS + NG + TYK++Y R+GI+L FD
Sbjct: 774 VCSCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGLLTYKEYYRLRHGIELQFD 833
Query: 889 REPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPS 948
E LL GRR+F VQNYL +CRQQK+KE S + ELPPELC I M+PIS+S YSF+ +PS
Sbjct: 834 GEKLLKGRRMFVVQNYLQRCRQQKEKELSNTTVELPPELCVIFMSPISISIIYSFSLIPS 893
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
IMHR++SLLLAVNLKN+ L++C QN IPT KVLEAITTK CQE FHLESLETLGDSFLK
Sbjct: 894 IMHRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTKHCQEGFHLESLETLGDSFLK 952
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD 1068
YAASQQLFKT+QN+HEGLLSVKKERIISNA+LCKLGC++KLPGFIR ESFDPK WII GD
Sbjct: 953 YAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGD 1012
Query: 1069 NSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI 1128
S S+ ++ L + RKIYV+ R+K+KSK +ADVVEALIGAFLSTGGE LIF+ +GI
Sbjct: 1013 QSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGI 1072
Query: 1129 KVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
VDFV VPY+R F V +R VNV +LES+LNYSFRDPSLLVEALTHGSYMLPEIPRCYQR
Sbjct: 1073 NVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1132
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGDAVLDYL+T++LY+KYPG+SPG LTD+RSASVNNDCYA S+VK LH+HILH+S
Sbjct: 1133 LEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQ 1192
Query: 1249 ELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
EL++ I +TV +F+KL + STFGWES +SFPK LGD+IESLAGAI VDS N+EVVFQSI
Sbjct: 1193 ELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSI 1252
Query: 1309 RPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHT 1368
RPLLEP+ITPET++ HP REL E CQK H+ +K+ V S+ +GKA+VT+EV+ANG +HT
Sbjct: 1253 RPLLEPLITPETVKLHPARELGELCQKEHYDIKRVVVSQ-NGKASVTIEVEANGAKHKHT 1311
Query: 1369 FLDADKKTAKKVACKEVLKSLRASFPGT 1396
+DK+TA K+A KEVLKSL+ S T
Sbjct: 1312 S-TSDKRTATKLASKEVLKSLKESIAQT 1338
>gi|356533095|ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1414
Score = 1707 bits (4420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1399 (60%), Positives = 1065/1399 (76%), Gaps = 30/1399 (2%)
Query: 3 PVSMESDTTEE---VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY 59
PV M+S+T ++ +SAD L FAR+YQLEAL+NA+++NTIV+LETGSGKTLIA+MLLRSY
Sbjct: 6 PVEMDSNTQQQQKVISADVLSFARSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRSY 65
Query: 60 AYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK 119
A+ LRKPSP +AVFLVPKVVLV QQAEA+K HTDLKVG YWGDMG+DFWD ATWK+E+ K
Sbjct: 66 AHHLRKPSPQIAVFLVPKVVLVSQQAEAVKKHTDLKVGLYWGDMGIDFWDAATWKQEVQK 125
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN 179
+EV VMTP ILL+ LR S+ KLN+IKVLI+DECHHARGKH YA IMTEFYH L +G S+
Sbjct: 126 YEVFVMTPAILLNCLRHSFLKLNLIKVLIMDECHHARGKHPYASIMTEFYHHQLNSGISD 185
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF 239
LPRIFGMTASPIKSKV + E + + I L TLM+SKVYTC SE+VL+ FIP ST KFKF
Sbjct: 186 LPRIFGMTASPIKSKVGNCELSWSENIRKLMTLMHSKVYTCVSEAVLTEFIPTSTPKFKF 245
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
Y+ +E+ L+ LA +L M++ +H +L++ D ++ AE R++ KI S L++CL EL
Sbjct: 246 YQGNEVQSVLFEDLAFKLKMLKEQHESNLKSSDFTKSAAEFARRRTKKIFSALIFCLDEL 305
Query: 300 GVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
GVWLALKAAE++S + F+W G+T++K F S Q L TY+P G +WSIGD+
Sbjct: 306 GVWLALKAAESLSSNDIQLFSWGH---SGDTVVKNFISAGVQTLKTYLPCGPQWSIGDNI 362
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
K++++ LL+ K+ CLI+S+LEYRG+ D+RCIIFVERVITA+VL+ LL+ LLP++ +WKT
Sbjct: 363 KYDVEMELLSSKVCCLIDSILEYRGLTDMRCIIFVERVITAVVLRDLLNTLLPKYNSWKT 422
Query: 420 KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
K+IAG N G+Q QSRKKQNEIVEEFR GLVN+IVATSILEEGLDV+SCNLVI FDP TV
Sbjct: 423 KFIAGQNFGLQNQSRKKQNEIVEEFRMGLVNIIVATSILEEGLDVESCNLVIRFDPCHTV 482
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNH 539
CSFIQSRGRARMQNSDY+LMVKSGDS T SRL YLASG+ MRKE L H+SLPC PL
Sbjct: 483 CSFIQSRGRARMQNSDYILMVKSGDSVTCSRLAKYLASGDIMRKESLRHSSLPCDPLEED 542
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNN 599
+ ++ Y V ST A LSSS+SLI+ YCSRLP+DGYFKPT ++ +KE G TLYLP +
Sbjct: 543 RFDKETYRVASTEAFANLSSSISLIHLYCSRLPADGYFKPTLRW--DKETG--TLYLPKS 598
Query: 600 CPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEH 659
CP+Q + +G+ K LK ACLEACK+LH+IGAL+DNL+PDIV+E+ + ++ GNEPY+
Sbjct: 599 CPLQPIRVEGDKKILKNIACLEACKQLHKIGALSDNLVPDIVMEEAEVEELGNEPYDENQ 658
Query: 660 PIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLE 719
P + P LVN +++ YHCY +E F+YD+S ++I L MR EL+ EI + FD+
Sbjct: 659 PTFVPFGLVNSVSNNSQTVYHCYFMEFNNKFSYDVSVQDIFLLMRIELDPEIGCMQFDMG 718
Query: 720 VERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEI 779
+RG L+VN ++ G I L P+QVLLC++FQ+T+ R+++DH+++KL LD L D+LEI
Sbjct: 719 FDRGSLSVNFRYKGTINLSPDQVLLCKKFQVTILRILIDHDMNKLTAGLDRCYLEDDLEI 778
Query: 780 DYLLLPSTGQ----LIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIH 835
DYLLLP+ G+ I+W V +V N S+ S ++ + TKSG +C+CK+
Sbjct: 779 DYLLLPAMGKGKYTAINWLAVNSV-----NPSE----VSCKYHEPHIRTKSGLVCSCKLQ 829
Query: 836 NSLVCTPHN-GQI--YCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPL 892
N+LVCT H G+I Y TG + L+ NS G VTTYKK+YE+ +GIQL F+ + L
Sbjct: 830 NALVCTSHPIGKISFYIATGTM-ELDGNSPMELRGGGVTTYKKYYEQHHGIQLQFEHQRL 888
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
L R IF V+N+ +Q K+ E SK ELPPELC I+M PIS S YS++F+PSIMHR
Sbjct: 889 LKARHIFQVKNHCHGRKQGKEGEVSKAFVELPPELCSIVMMPISDSLIYSYSFIPSIMHR 948
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAAS 1012
+SLL A NLK M LDHC +N I TIKVLEAITTK+C+E FH ESLETLGDSFLKYAAS
Sbjct: 949 FESLLGAFNLKKMHLDHCARN-EIQTIKVLEAITTKRCKEAFHYESLETLGDSFLKYAAS 1007
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
QQLFKTY N+HEGLLS+K+E+IISNAALCKLGC LPGFIR E FDP WIIPGD S
Sbjct: 1008 QQLFKTYHNHHEGLLSLKREKIISNAALCKLGCSSGLPGFIRNEPFDPNTWIIPGDKPRS 1067
Query: 1073 YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 1132
++L + + G+ IYV+G++K++ K VADVVEALIGAFLSTGGE L+F+D +GIKV F
Sbjct: 1068 FKLK-ELVAKGKTIYVSGKRKLRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGIKVSF 1126
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
+PY R F + E+LVNV LES LNYSF D SLLVEA+THGSYMLPE+PRCYQRLEFL
Sbjct: 1127 NKIPYDRHFDIQPEKLVNVSFLESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQRLEFL 1186
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GD+VLDYLIT +LYNKYPG++PG LTDMRSASVNNDCYA S++KHGLHKH+LHAS EL+
Sbjct: 1187 GDSVLDYLITWHLYNKYPGMTPGQLTDMRSASVNNDCYAWSAIKHGLHKHVLHASQELHM 1246
Query: 1253 RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
++ T++ F+KLS STFG+E+ TS PK LGDI+ESLAGAI VDSG N+EVV+QSIRPLL
Sbjct: 1247 HVSATLNKFDKLSSLSTFGYEAETSLPKVLGDIVESLAGAILVDSGYNKEVVWQSIRPLL 1306
Query: 1313 EPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFL-D 1371
EP++TPET++ HP+REL E CQK + + SR G +EV+A+G + ++ + D
Sbjct: 1307 EPLVTPETLKLHPIRELNELCQKRSYKIILEDVSRKDGLTYYRMEVEADGIIHKYEYKGD 1366
Query: 1372 ADKKTAKKVACKEVLKSLR 1390
A + TAKK+ CKE+L SL+
Sbjct: 1367 ALRDTAKKIVCKEILNSLK 1385
>gi|356532427|ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1421
Score = 1691 bits (4378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1401 (60%), Positives = 1053/1401 (75%), Gaps = 31/1401 (2%)
Query: 2 EPVSMESDTTEE----VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR 57
E SME DT + ++ D LPFAR+YQLEAL A+ +NTIV+LETGSGKTLIAIMLLR
Sbjct: 37 EAPSMEMDTDSQEDQNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSGKTLIAIMLLR 96
Query: 58 SYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM 117
SYA+ LRKPSP++AVFLVP+VVLV QQAEA+K HTDLKVG YWGDMGVDFWD ATWK+EM
Sbjct: 97 SYAHQLRKPSPYIAVFLVPQVVLVSQQAEAVKRHTDLKVGMYWGDMGVDFWDAATWKQEM 156
Query: 118 SKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD 177
KHEVLVMTP ILL LR S+FKLNMI VLI+DECHHARGKH YACIMTEFYH L++G
Sbjct: 157 EKHEVLVMTPAILLSCLRHSFFKLNMINVLIMDECHHARGKHPYACIMTEFYHHQLKSGI 216
Query: 178 SNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKF 237
S+LPRIFGMTASPIKSKV SE + + I L LM+SKVYTC SE+V++ FIP ST KF
Sbjct: 217 SDLPRIFGMTASPIKSKVGKSESSWSENIQKLMILMHSKVYTCVSEAVITEFIPTSTPKF 276
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
KFY + I L+ LA +L M++ +H +L + D ++ AE +K+++KI +L++CL
Sbjct: 277 KFYSNNGIQFVLFEELASKLKMLKEQHELTLRSSDFTKSIAESAQKRITKIFCSLMFCLD 336
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
ELGVWLALKAAE++S E + F+W G+ ++K F + AL +Y+ +WSIGD
Sbjct: 337 ELGVWLALKAAESLSSNEIESFSWGH---SGDRVVKDFILEGVHALKSYLQCDPQWSIGD 393
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW 417
+ K ++ GLLT K+ CL++SLLEYRG+ D+RCIIFVER+ITAIVL+ LL+ LLP++ +W
Sbjct: 394 NIKSDVKMGLLTSKVCCLVDSLLEYRGLTDMRCIIFVERIITAIVLEDLLNTLLPKYNSW 453
Query: 418 KTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
KTK+IAG N G+Q QSR KQNEIV EFR GLVN+IVATSILEEGLDVQ CNLVI FDP
Sbjct: 454 KTKFIAGYNFGLQNQSRTKQNEIVNEFRMGLVNIIVATSILEEGLDVQRCNLVIRFDPCP 513
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLN 537
TVCSFIQSRGRARM+NSDY+LMVKSGDS T SRLE YLAS + MRKE L H+SLPC P
Sbjct: 514 TVCSFIQSRGRARMRNSDYILMVKSGDSVTCSRLEKYLASADIMRKESLRHSSLPCDPFE 573
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLP 597
+ ++ YHV STG IA LSSS+SLIY YCSRLP+DGYFKP P++ +KE G TLYLP
Sbjct: 574 GDEFDKEAYHVSSTGAIANLSSSISLIYLYCSRLPADGYFKPAPRW--DKETG--TLYLP 629
Query: 598 NNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNA 657
+CP+Q + +GN K LK ACLEACK+LH+IGALTDNL+PDIV+E+ + ++ GNEPY+
Sbjct: 630 KSCPLQPICVEGNKKHLKNIACLEACKQLHKIGALTDNLVPDIVIEEAEVEEFGNEPYDE 689
Query: 658 EHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFD 717
P + P LVN ++ YHCYL+EL Q+F+YDIS ++I LA+R EL+ EI FD
Sbjct: 690 NQPTFVPFGLVNSVSNNSHTIYHCYLMELSQNFSYDISVQDIFLAIRIELDPEIGCTQFD 749
Query: 718 LEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNL 777
+ +RG +++ L++ G I L PN VLLC++FQ+TL I+DH+++KL LD L DN+
Sbjct: 750 MGFDRGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDKCYLEDNV 809
Query: 778 EIDYLLLPSTGQ----LIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK 833
EIDYLLLP+ G+ ++W + +V + C ++ + TKSG +CTCK
Sbjct: 810 EIDYLLLPAIGKGEKSHVNWLAIKSV-------EPSSFTCK--YHQPHIETKSGLVCTCK 860
Query: 834 IHNSLVCTPHNGQ---IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDRE 890
+ ++LVCT H G Y TG++ L+ NS G VTTYKK+YE+ +GIQL F+ +
Sbjct: 861 LQDALVCTSHPGGKIYFYITTGIM-ELHGNSPMELRGGEVTTYKKYYEQHHGIQLQFENQ 919
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIM 950
LL R F V+NY +Q K E SK ELPPELC I+M+PI S Y+F+F+PSIM
Sbjct: 920 WLLKARHHFKVKNYCHGQKQGKDGEASKAFVELPPELCSIVMSPIKDSIIYTFSFIPSIM 979
Query: 951 HRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYA 1010
HRL+SLL A NLK M LDHC QN I TIKVLEAITTK+C E FH ESLETLGDSFLKYA
Sbjct: 980 HRLESLLGAFNLKKMHLDHCTQN-EIQTIKVLEAITTKRCNEAFHYESLETLGDSFLKYA 1038
Query: 1011 ASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS 1070
ASQQLFKTY+N+HEGLLSVK+E+IISNAALCKLGC LPGFIR E FDP W IPGD
Sbjct: 1039 ASQQLFKTYKNHHEGLLSVKREKIISNAALCKLGCSSGLPGFIRNEPFDPHAWTIPGDKP 1098
Query: 1071 GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
S +L ++ + G+KIYV G++K+ K +ADVVEALIGAFLSTGGE L+F+D +GIKV
Sbjct: 1099 ESLKL-EELVIKGKKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKV 1157
Query: 1131 DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLE 1190
F +PY+R F + E+L+NVR LES L YSF D SLLVEALTHGSYMLPE+PRCYQRLE
Sbjct: 1158 SFDKIPYERHFDIQPEKLLNVRFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLE 1217
Query: 1191 FLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
FLGD+VLDYLIT +LYN+YPG+SPG LTDMR+ASVNNDCYA S++KHGLHKH+LHAS EL
Sbjct: 1218 FLGDSVLDYLITWHLYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQEL 1277
Query: 1251 YKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
+K I +T+++F+KLS STFG+ES S PK LGDIIESLAGAI VDSG N+EVV+QSIRP
Sbjct: 1278 HKHIAVTLNNFDKLSSSSTFGYESEASPPKVLGDIIESLAGAILVDSGFNKEVVWQSIRP 1337
Query: 1311 LLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFL 1370
LLEP++TPET++ HP+REL E CQK + + SR G ++V+A+G + E+ +
Sbjct: 1338 LLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHEYEYT 1397
Query: 1371 D-ADKKTAKKVACKEVLKSLR 1390
A + TAKK+ACKE+L SL+
Sbjct: 1398 GPALRDTAKKIACKEILNSLK 1418
>gi|145338056|ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640405|gb|AEE73926.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 1686 bits (4366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 838/1397 (59%), Positives = 1046/1397 (74%), Gaps = 17/1397 (1%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
M+ +ME++TT++VSA L FAR+YQ+EALE A+KQNTIVFLETGSGKTLIAIMLLRSYA
Sbjct: 3 MDADAMETETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYA 62
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
YL RKPSP VFLVP+VVLV QQAEA+KMHTDLKVG YWGDMGVDFWD +TWK+E+ K+
Sbjct: 63 YLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKY 122
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
EVLVMTP ILLD LR S+ L+MIKVLI+DECHHA GKH YACIM EFYH+ L +G SN+
Sbjct: 123 EVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNV 182
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
PRIFGMTAS +K+K + YW+KIH+LETLMNSKVYTC +ESVL+ F+PFST FK+Y
Sbjct: 183 PRIFGMTASLVKTK-GENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYY 241
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG 300
++ +IP L ++L + +KH SL LDLN + + + K++ +I+STL YCL +LG
Sbjct: 242 QHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLG 301
Query: 301 VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSK 360
+ LA KAA+++S ++D F W +L+ F ++KKF SDASQ + +P G WS+ + +
Sbjct: 302 ILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANING 361
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
N ++GLLT K VCLIE+LL Y +E+IRCIIFV+RVITAIVL+SLL+E+LP WKTK
Sbjct: 362 -NAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTK 420
Query: 421 YIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
Y+AGNNSG+Q Q+RKKQNEIVE+FRRGLVN+IVATSILEEGLDVQSCNLVI FDP+ +C
Sbjct: 421 YVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNIC 480
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
SFIQSRGRARMQNSDYL+MV+SGD TQSRL YL+ G +MR+E L H+ +PC PL +
Sbjct: 481 SFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDS 540
Query: 541 YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNC 600
E + VESTG TLSSSVSLIY YCSRLPSD YFKP P+F +NK+ G CTLYLP +C
Sbjct: 541 -DEPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSC 599
Query: 601 PIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP 660
P++ V A+ N K LKQA CL+AC +LH++GAL+D+L+PD+VV + +QK YN E P
Sbjct: 600 PVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQP 659
Query: 661 IYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEV 720
YFPPELV+Q + TYH YLI +K + + +++L R LE +I +F LE
Sbjct: 660 CYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLED 719
Query: 721 ERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID 780
RG + V L ++G L +VL CRRFQITLFRV++DH+++ L E L+G LRD + +D
Sbjct: 720 HRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALD 779
Query: 781 YLLLPST----GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHN 836
YLL+PST LIDW+ + +V + + NCST +RI+HTK G CTC + N
Sbjct: 780 YLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQN 839
Query: 837 SLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGR 896
+LV TPHNG +YC GVL +LN NSL T+ N TY ++YEER+GIQL F EPLLNGR
Sbjct: 840 ALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGR 899
Query: 897 RIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
IF + +YL +++K+KE + ELPPELC +I++PIS+ YS+TF+PS+M R++SL
Sbjct: 900 HIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESL 959
Query: 957 LLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
L+A NLK + V IPTIKVLEAITTKKC++ FHLESLETLGDSFLKYA QQLF
Sbjct: 960 LIAYNLKK-----SIPKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLF 1014
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELN 1076
+ +HEGLLS KK+ +ISN LC+ GC+QKL GFIR E F+PK W++PG +S +Y L
Sbjct: 1015 QHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLV 1074
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+D+L R IYV R+ +K K+VADVVE+LIGA+LS GGE L+F++ +GIKVDF
Sbjct: 1075 NDTLPESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTK 1134
Query: 1137 YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 1196
QR + AE+LVNV ++ESLLNYSF D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+V
Sbjct: 1135 IQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSV 1194
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LDYLIT +LY+KYP LSPG LTDMRSASVNN+CYAL +VK LHKHIL+ASH L+K I+
Sbjct: 1195 LDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISR 1254
Query: 1257 TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
TV FE+ SL STFGWES SFPK LGD+IESLAGAIFVDSG N+EVVF SI+PLL MI
Sbjct: 1255 TVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMI 1314
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKT 1376
TPET++ HPVRELTE CQK F + S+ + TVEV+A F HT +DKK
Sbjct: 1315 TPETVKLHPVRELTELCQKWQFEL-----SKAKDFDSFTVEVKAKEMSFAHTAKASDKKM 1369
Query: 1377 AKKVACKEVLKSLRASF 1393
AKK+A KEVL L+ S
Sbjct: 1370 AKKLAYKEVLNLLKNSL 1386
>gi|94450854|gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 1682 bits (4355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 836/1397 (59%), Positives = 1045/1397 (74%), Gaps = 17/1397 (1%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
M+ +ME++TT++VSA L FAR+YQ+EALE A+KQNTIVFLETGSGKTLIAIMLLRSYA
Sbjct: 1 MDADAMETETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYA 60
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
YL RKPSP VFLVP+VVLV QQAEA+KMHTDLKVG YWGDMGVDFWD +TWK+E+ K+
Sbjct: 61 YLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKY 120
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
EVLVMTP ILLD LR S+ L+MIKVLI+DECHHA GKH YACIM EFYH+ L +G SN+
Sbjct: 121 EVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNV 180
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
PRIFGMTAS +K+K + YW+KIH+LETLMNSKVYTC +ESVL+ F+PFST FK+Y
Sbjct: 181 PRIFGMTASLVKTK-GENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYY 239
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG 300
++ +IP L ++L + +KH SL LDLN + + + K++ +I+STL YCL +LG
Sbjct: 240 QHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLG 299
Query: 301 VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSK 360
+ LA KAA+++S ++D F W +L+ F ++KKF SDASQ + +P G WS+ + +
Sbjct: 300 ILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANING 359
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
N ++GLLT K VCLIE+LL Y +E+IRCIIFV+RVITAIVL+SLL+E+LP WKTK
Sbjct: 360 -NAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTK 418
Query: 421 YIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
Y+AGNNSG+Q Q+RKKQNEIVE+FRRGLVN+IVATSILEEGLDVQSCNLVI FDP+ +C
Sbjct: 419 YVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNIC 478
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
SFIQSRGRARMQNSDYL+MV+SGD TQSR YL+ G +MR+E L H+ +PC PL +
Sbjct: 479 SFIQSRGRARMQNSDYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHSLVPCPPLPDDS 538
Query: 541 YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNC 600
E + VESTG TLSSSVSLIY YCSRLPSD YFKP P+F +NK+ G CTLYLP +C
Sbjct: 539 -DEPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSC 597
Query: 601 PIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP 660
P++ V A+ N K LKQA CL+AC +LH++GAL+D+L+PD+VV + +QK YN E P
Sbjct: 598 PVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQP 657
Query: 661 IYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEV 720
YFPPELV+Q + TYH YLI +K + ++ +++L R LE +I +F LE
Sbjct: 658 CYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNLHLNDVLLGTRVVLEDDIGNTSFRLED 717
Query: 721 ERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID 780
RG + V L ++G L +VL CRRFQITLFRV++DH+++ L E L+G LRD + +D
Sbjct: 718 HRGTIAVTLSYVGAFHLTREEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALD 777
Query: 781 YLLLPST----GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHN 836
YLL+PST LIDW+ + +V + + NCST +RI+HTK G CTC + N
Sbjct: 778 YLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQN 837
Query: 837 SLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGR 896
+LV TPHNG +YC GVL +LN NSL T+ N TY ++YEER+GIQL F EPLLNGR
Sbjct: 838 ALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGR 897
Query: 897 RIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
IF + +YL +++K+KE + ELPPELC +I++PIS+ YS+TF+PS+M R++SL
Sbjct: 898 HIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESL 957
Query: 957 LLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
L+A NLK + V IPTIKVLEAITTKKC++ FHLESLETLGDSFLKYA QQLF
Sbjct: 958 LIAYNLKK-----SIPKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLF 1012
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELN 1076
+ +HEGLLS KK+ +ISN LC+ GC+QKL GFIR E F+PK W++PG +S +Y L
Sbjct: 1013 QHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLV 1072
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+D+L R IYV R+ +K K+VADVVE+LIGA+LS GGE L+F++ +GIKVD
Sbjct: 1073 NDTLPESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTK 1132
Query: 1137 YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 1196
QR + AE+LVNV ++ESLLNYSF D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+V
Sbjct: 1133 IQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSV 1192
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LDYLIT +LY+KYP LSPG LTDMRSASVNN+CYAL +VK LHKHIL+ASH L+K I+
Sbjct: 1193 LDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISR 1252
Query: 1257 TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
TV FE+ SL STFGWES SFPK LGD+IESLAGAIFVDSG N+EVVF SI+PLL MI
Sbjct: 1253 TVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMI 1312
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKT 1376
TPET++ HPVRELTE CQK F + S+ + TVEV+A F HT +DKK
Sbjct: 1313 TPETVKLHPVRELTELCQKWQFEL-----SKAKDFDSFTVEVKAKEMSFAHTAKASDKKM 1367
Query: 1377 AKKVACKEVLKSLRASF 1393
AKK+A KEVL L+ S
Sbjct: 1368 AKKLAYKEVLNLLKNSL 1384
>gi|189908862|gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
Length = 1392
Score = 1666 bits (4314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/1399 (58%), Positives = 1033/1399 (73%), Gaps = 15/1399 (1%)
Query: 1 MEPVSMESDTTEEVSADT-LPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY 59
M V ME+++ ++VSA + LPFAR+YQ+EALE A+K+NTIV+LETGSGKTLIAIMLLRSY
Sbjct: 1 MTIVDMETESADQVSASSPLPFARSYQVEALEKAMKRNTIVYLETGSGKTLIAIMLLRSY 60
Query: 60 AYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK 119
AYL RKPSP +VFLVP+VVLV QQAEA+K HTDLKVG YWG MGVDFWD TWK+E+
Sbjct: 61 AYLFRKPSPCFSVFLVPQVVLVTQQAEALKRHTDLKVGMYWGSMGVDFWDAPTWKQEVDT 120
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN 179
+EVLVMTP ILL LR S+ LNMIKVLI DECHHARG H YACI+ EFYH+ L++ S
Sbjct: 121 YEVLVMTPAILLSALRHSFLSLNMIKVLIFDECHHARGNHAYACILKEFYHKELKSATSL 180
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF 239
+PRIFGMTASP+K+K + YW+KIH+LE+LMNSKVYTCA+ESVL+ F+PFST FK+
Sbjct: 181 VPRIFGMTASPVKTK-GENLDSYWKKIHELESLMNSKVYTCANESVLAQFVPFSTPSFKY 239
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
Y Y EIP + + EL + +H +L LDL + I+K++SKI S++ YCL EL
Sbjct: 240 YTYVEIPSSARAGIIAELEKLAKEHLLALATLDLKSSTVNSIKKRLSKICSSITYCLDEL 299
Query: 300 GVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
G+ +ALKAA++ S ++DF W QL F ET IK F DASQA++ Y+P G WS+ +
Sbjct: 300 GILMALKAAQSFSVSQNDFVLWGQLGEFSETSIKNFCRDASQAILAYIPDGPYWSVANIE 359
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
+ NL++GL+T KIVCL+ESLL Y +E IRCIIFVERVI A+VL+S L+E+LP + +WKT
Sbjct: 360 R-NLEAGLVTSKIVCLVESLLGYSSLEKIRCIIFVERVIAAMVLESFLNEILPTYNSWKT 418
Query: 420 KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
KY+AGNNSG+Q Q+RKKQNE VE+FR+GLVN+IV+TSILEEGLDVQSCNLV+ FDP+ +
Sbjct: 419 KYVAGNNSGLQSQTRKKQNETVEDFRKGLVNIIVSTSILEEGLDVQSCNLVVGFDPASNI 478
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNH 539
CSFIQS+GRARM NSDYL+MV+ GD T+SRL Y++ G +MR++ L ++ +PC PL
Sbjct: 479 CSFIQSQGRARMPNSDYLMMVERGDMETKSRLMTYISGGKRMREDSLRYSHVPCQPLPKD 538
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNN 599
G DFY V STG I TLSSSVSLIYFYCSRLPSD YFKP P+F I+++ G CTLYLP +
Sbjct: 539 SSG-DFYAVNSTGAIVTLSSSVSLIYFYCSRLPSDEYFKPAPRFDIDEDQGKCTLYLPKS 597
Query: 600 CPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEH 659
C ++ V Q N LKQ ACL+AC +LH+ GALTD+L+PD+V+++ QK G Y+ E
Sbjct: 598 CQVKEVRVQANRNVLKQTACLKACIQLHKAGALTDHLVPDMVLKETVQQKLGKIHYDPEQ 657
Query: 660 PIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLE 719
YFPPELV+Q ++ TYH Y I +K F ++ +I+L R ELE++I F LE
Sbjct: 658 SSYFPPELVSQFSAHSQTTYHFYSIRMKSEFPRNLHFNDILLGTRVELEADIGNTCFRLE 717
Query: 720 VERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEI 779
G + V L ++G L N+VLLCRRFQITLFRV++DH+++ L LDG LRD + +
Sbjct: 718 DHLGTIGVTLSYVGAFDLTQNEVLLCRRFQITLFRVLLDHSVENLAAALDGLHLRDGVAL 777
Query: 780 DYLLLPST----GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIH 835
DYLL+PST LIDW + +V + + +++CS + I+HTK G CTC +
Sbjct: 778 DYLLVPSTHEQKASLIDWGVLRSVNLTSNRPRERHVDCSAKDASCILHTKDGLFCTCVLQ 837
Query: 836 NSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNG 895
N+LV TPHNG +YC G+L HL+ANS+ T+ +Y ++YE+R+ I+L F EPLLNG
Sbjct: 838 NALVYTPHNGYVYCTRGILSHLHANSILTKRKSGDVSYMEYYEKRHEIRLNFVDEPLLNG 897
Query: 896 RRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
R IF + N+L R++K+KE + ELPPELC +I++PIS+ YS+ F+PS+M R++S
Sbjct: 898 RHIFTLHNHLHMTRKKKEKEHDREFVELPPELCHVILSPISVDMIYSYKFMPSVMQRIES 957
Query: 956 LLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQL 1015
LL+A NLK + V IPTIKVLEAITTKKCQ+ FHLESLETLGDSFLKYA Q L
Sbjct: 958 LLIAFNLKK-----SIPTVNIPTIKVLEAITTKKCQDQFHLESLETLGDSFLKYAVCQHL 1012
Query: 1016 FKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYEL 1075
F++Y +HEGLLS K+ +ISN LCK GC QKL GFIR E F+PK W++PG +S +Y L
Sbjct: 1013 FQSYDTHHEGLLSTIKDEMISNVTLCKFGCNQKLQGFIRNECFEPKGWMVPGQSSAAYAL 1072
Query: 1076 NDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 1135
+D L R +Y+ R +K K+VADVVEALIGA+LS GGE L F++ +GIKVDF
Sbjct: 1073 VNDYLSESRNMYIARRMNLKRKSVADVVEALIGAYLSEGGELAALTFMNWVGIKVDFTTT 1132
Query: 1136 PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
QR+ + AE+LVNVR++ESLLNY F+D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+
Sbjct: 1133 MIQREPSIQAEKLVNVRYMESLLNYKFKDKSLLVEALTHGSYMIPEIPRCYQRLEFLGDS 1192
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
VLDYLIT +LY +YP LSPG LTDMRSASVNN+CYA +VK LHKH+LHASH+L+K I+
Sbjct: 1193 VLDYLITKHLYGEYPNLSPGLLTDMRSASVNNECYAQVAVKSNLHKHVLHASHDLHKHIS 1252
Query: 1256 ITVDSFEKL-SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
TV FE+L S+ S+FGWES +FPK LGD+IESLAGAI VDSG N+EVVF I+PLL
Sbjct: 1253 RTVSEFERLSSVQSSFGWESEIAFPKVLGDVIESLAGAIHVDSGYNKEVVFACIKPLLGC 1312
Query: 1315 MITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
MITPET++ HPVRELTE CQK F + K V +G+A VEV+A F HT DK
Sbjct: 1313 MITPETVKLHPVRELTELCQKAQFELSK-VKGFENGEAFFPVEVEAKEMSFAHTARAFDK 1371
Query: 1375 KTAKKVACKEVLKSLRASF 1393
K AKK+A KEVL SL+ S
Sbjct: 1372 KMAKKLAYKEVLNSLKKSL 1390
>gi|379987678|gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 1642 bits (4252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/1401 (57%), Positives = 1043/1401 (74%), Gaps = 15/1401 (1%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
MEP + +++ D+LPFAR+YQLEALE ALK+NTIV+LETGSGKTLIAIMLLRSYA
Sbjct: 1 MEPAEVTVSENQQLCPDSLPFARSYQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYA 60
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
YLLRKPSP++AVFLVP VVLV QQ +A+ MHTDLKVGKYWG+MGVD+WD ATW++++ H
Sbjct: 61 YLLRKPSPYIAVFLVPTVVLVAQQGDALIMHTDLKVGKYWGEMGVDYWDAATWQKQVVDH 120
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
EVLVMTP ILL LR S+ K+ MIKVLI DECH+ARGKH YACIM EFYHR L + L
Sbjct: 121 EVLVMTPAILLAALRHSFLKIEMIKVLIFDECHNARGKHPYACIMKEFYHRQLTLESAQL 180
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
PRIFGMTASPIK+K SS E W+ I DLE LM+SKVYTC SE L+ +IPFST K K Y
Sbjct: 181 PRIFGMTASPIKTKGSSVEFT-WKMIRDLENLMHSKVYTCVSEFCLAKYIPFSTPKLKIY 239
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG 300
++ +IP L+ L +L ++ K+ S+ L++ A K++SK+ S+ ++CLSELG
Sbjct: 240 RHVDIPCTLFVSLVSDLIRLKDKYEDSISKSSLSDLSAGSAXKRLSKLYSSFIFCLSELG 299
Query: 301 VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSK 360
VWLA KAAE +S E+DFF+W +LD + I++ F AS+ + PSG+ WS+G D
Sbjct: 300 VWLAFKAAEFLSSEETDFFSWGELDVCAQRIVRNFSLGASKVFSAHXPSGSHWSLGGDIH 359
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
N+D+G LT K+ LIESLLEYR ++D+RCIIFVER+ITAIVL+SL +ELLP WKT+
Sbjct: 360 ANVDAGYLTSKVNSLIESLLEYRDLKDLRCIIFVERIITAIVLRSLXNELLPDLSGWKTE 419
Query: 421 YIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
Y AG++S +Q QSR QN+IVEEFR+G+VN+IVATSILEEGLDVQSCNLVI FDPS TVC
Sbjct: 420 YTAGHSSLLQSQSRNVQNKIVEEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDPSATVC 479
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
SFIQSRGRARMQNS ++LMV SGD++T +R++NY+ SG MR+E L HAS+PCSPL++ +
Sbjct: 480 SFIQSRGRARMQNSHFILMVGSGDASTLTRMQNYMQSGEIMRQESLRHASIPCSPLDDEL 539
Query: 541 YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNC 600
+ E +Y VE+TG + TLSSSVSL+YFYCSRLPSDGY+KP+P+ I KE CTLYLP NC
Sbjct: 540 HDEPYYKVETTGAVVTLSSSVSLLYFYCSRLPSDGYYKPSPRCAIEKETETCTLYLPKNC 599
Query: 601 PIQTVIA-QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEH 659
P+Q VI+ +GN K LKQ ACLEACK+LH+ GALTDNL+PDIV E+ ++ G + Y E
Sbjct: 600 PLQKVISVKGNTKILKQLACLEACKELHREGALTDNLVPDIVEEEAIIKELGCQIYTDEE 659
Query: 660 PIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLE 719
YFPPELV+ DT+ Y+CY ++L+ I+LA+RT L+ + +++ FDL+
Sbjct: 660 LKYFPPELVSHCANDTEAVYYCYEVDLQHDSYSSYQLCGIILAVRTRLKFDDERLTFDLD 719
Query: 720 VERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEI 779
V++G L V + + G ++L +VL C+RFQ++LFR+++D +L KL + L +L +
Sbjct: 720 VDKGSLLVQVNYSGVVRLTSEEVLRCQRFQVSLFRILLDRDLSKLEDALAAVQLPVGSAV 779
Query: 780 -DYLLLPSTGQL----IDWKTVATVLFPRDN-GSKHNMNCSTMFNARIVHTKSGPLCTCK 833
DYLLLPS G I+W+ V +VLFP G KH CST R V+TK+G +C+C
Sbjct: 780 SDYLLLPSLGSTQNPQINWECVNSVLFPSQVLGDKHIDCCSTQGRKRSVNTKTGVVCSCM 839
Query: 834 IHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLL 893
+ NSLVCTPHNG +YCITG L +L+ NSL + G TY ++Y++R+ I LCFD E LL
Sbjct: 840 LENSLVCTPHNGYVYCITGFLDNLDCNSLLEQRTGESITYIEYYKKRHRINLCFDGEQLL 899
Query: 894 NGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRL 953
G+ IF V NYL +CR QK K+ ++ S ELPPELC IIM+P+S+ST ++++++PS+MHR+
Sbjct: 900 RGKHIFKVHNYLQRCRSQKAKDSTESSVELPPELCSIIMSPVSISTLFTYSYLPSVMHRV 959
Query: 954 QSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDF---HLESLETLGDSFLKY 1009
+SL++A NLK M C Q + ++ + + + + F HL LETL + L+
Sbjct: 960 ESLIMASNLKRMHSYQCTQKHFLFQPLRFWKQLQQRNASKSFIWNHLRHLETLFSNMLRV 1019
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDN 1069
+ +L K + HEGLL+VKK +IISNAALCKLGC +K+PGFIR+E FD K W+IPGDN
Sbjct: 1020 YSCSRLMKIH---HEGLLTVKKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGDN 1076
Query: 1070 SGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 1129
S +++ L K+Y GR+K+KSK VADVVEALIGAFLS+GGE L F+ +G+
Sbjct: 1077 SQVQNFDEELLMPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGVD 1136
Query: 1130 VDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 1189
+DFV+ P R F ++AE+LVNVR+LESLL+Y F DPSLLVEALTHGSYMLPEIPRCYQRL
Sbjct: 1137 IDFVDAPTPRHFPMNAEKLVNVRYLESLLDYKFHDPSLLVEALTHGSYMLPEIPRCYQRL 1196
Query: 1190 EFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHE 1249
EFLGDAVLDY +T +LY KYPGLSPG++TD+RSASVNN+CYA ++VK GLHKHILHAS +
Sbjct: 1197 EFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILHASQD 1256
Query: 1250 LYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
L ++I TV +FEKL STFGWES T+FPK LGD+IESLAGAIFVDSG N++VVFQS+R
Sbjct: 1257 LQRQIVNTVLNFEKLDPASTFGWESETTFPKVLGDVIESLAGAIFVDSGFNKDVVFQSVR 1316
Query: 1310 PLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF 1369
LLEP+ITP+T++ HPVREL+E C + + KK V SR +G A +TVEV+A+G + T
Sbjct: 1317 TLLEPLITPDTVKLHPVRELSELCDQKGYIKKKNVVSRENGVAYITVEVEADGVSHKFTC 1376
Query: 1370 LDADKKTAKKVACKEVLKSLR 1390
+ DKK A+KVACK VLK L+
Sbjct: 1377 SERDKKMAEKVACKNVLKLLK 1397
>gi|357448551|ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
gi|355483599|gb|AES64802.1| Endoribonuclease Dicer [Medicago truncatula]
Length = 1418
Score = 1634 bits (4231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 819/1400 (58%), Positives = 1039/1400 (74%), Gaps = 33/1400 (2%)
Query: 1 MEPVSMESDTTEE--VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS 58
ME ME D +E + + LPFAR+YQLEALE A+++NTIV+LETGSGKTLIAIMLLRS
Sbjct: 40 MEEALMEMDDYDEQQIRPNALPFARSYQLEALEKAIRENTIVYLETGSGKTLIAIMLLRS 99
Query: 59 YAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS 118
YAY LRKPSP++AVFLVPKVVLV QQAEA++ HTDLK+G YWGDMGVD+WDG WK EM
Sbjct: 100 YAYHLRKPSPYIAVFLVPKVVLVSQQAEALRNHTDLKIGMYWGDMGVDYWDGDVWKGEME 159
Query: 119 KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS 178
KHEVLVMTP ILL LR S+ KL+MIKVLI+DECHHA G+H YACIMTEFYH L +G +
Sbjct: 160 KHEVLVMTPAILLSCLRHSFIKLSMIKVLIMDECHHAAGRHPYACIMTEFYHHQLRSGIT 219
Query: 179 NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK 238
LPRIFGMTASPIKSK ++SE + I +L TLM+SKVYTC ++V+S FIP ST KF+
Sbjct: 220 ELPRIFGMTASPIKSKAANSESTLSKSIRELMTLMHSKVYTCVCDAVISQFIPTSTPKFR 279
Query: 239 FYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSE 298
FY+ + I + L+ LA L ++ +H R + + DL ++ + KK+++I ++CL E
Sbjct: 280 FYRDNGISYTLFEELAKRLNELKQQHERCITSSDLTKSAVQSAHKKIARIFDASIFCLEE 339
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGF-GETIIKKFGSDASQALVTYVPSGAEWSIGD 357
LG+WLALKAAE++S E + F W G G+ I+KKF S L + +PS W+I D
Sbjct: 340 LGIWLALKAAESLSSIEIETFLW----GISGDQIVKKFSSATMMTLQSCIPSDPRWTIAD 395
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW 417
+ NL+ GLLT K+ CLIE LLEYRG+ ++RCI+FVERVI AIVL+ LL+ LLP++ +W
Sbjct: 396 NMNSNLEMGLLTSKVCCLIECLLEYRGLTEMRCIVFVERVIAAIVLEVLLNALLPKYNSW 455
Query: 418 KTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ K+IAG S +Q Q+RK QNEIVEEFR+GLVN+IVATSILEEGLDVQSCNLVI FDPS
Sbjct: 456 RAKFIAGTGSKLQNQTRKIQNEIVEEFRKGLVNIIVATSILEEGLDVQSCNLVIRFDPSP 515
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLN 537
TVCSF+QSRGRARM+NSDY+LMVKSGD+ T+SRLE YL G MRKE L ++SLPC L
Sbjct: 516 TVCSFVQSRGRARMRNSDYILMVKSGDAVTRSRLEKYLDGGQMMRKESLRYSSLPCESLE 575
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLP 597
+ + E Y V ST + LSS ++LIY YCSRLPSDGYFKPTP + +K GI LYLP
Sbjct: 576 SDRFNEQAYRVASTEAVVNLSSGITLIYLYCSRLPSDGYFKPTPMW--DKHKGI--LYLP 631
Query: 598 NNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNA 657
+CPI + QG+ K LK ACLEACK+LH+IGALTDNL+P IVVE+ + ++ GNEPY+
Sbjct: 632 KSCPIHAIHVQGDNKFLKNIACLEACKQLHKIGALTDNLVPSIVVEEAEVEEFGNEPYSE 691
Query: 658 EHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFD 717
E P Y P ELVN ++ Y+CYLIELKQ+F+YDI+ ++I LA R EL+ EI + FD
Sbjct: 692 EQPSYVPFELVNHMSNNSSTIYYCYLIELKQNFSYDITVQDIFLATRVELDPEIGCMQFD 751
Query: 718 LEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNL 777
+ +RG L VNL++ G I L P+QVLLC+RFQ+++ ++M+ +DK + + L D+L
Sbjct: 752 MCFDRGSLAVNLRYRGNINLSPDQVLLCKRFQVSILGILMNSKMDK-ESFSEKYSLEDDL 810
Query: 778 EIDYLLLPSTG----QLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK 833
EIDYLLLPS +DW T++++ H ++A + T+ G C C
Sbjct: 811 EIDYLLLPSIAIEETPSVDWLTISSI---------HPSKIQCRYHAANILTEKGFACGCI 861
Query: 834 IHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLL 893
+ N+L+CTPHNG+ Y G++ L+ NS +G VTTYKK++ +++GIQL F+ + LL
Sbjct: 862 LRNALICTPHNGRTYITAGMM-ELDGNSPLEVGDGEVTTYKKYFGQKHGIQLRFEHQRLL 920
Query: 894 NGRRIFHVQNYLSKCRQQKQK--EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
R +F V+NY Q K + SK ELPPELC IIM+P+ LST Y+F+F+PSIMH
Sbjct: 921 KARHVFPVKNYCHGYSQAKDRGLNVSKTFVELPPELCSIIMSPVPLSTLYTFSFIPSIMH 980
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
RL+SLL A N K M LD+C QN I T KVLEA+TTK C+E FH ESLETLGDSFLKYA
Sbjct: 981 RLESLLGAYNFKRMHLDYCPQN-KIQTFKVLEAMTTKSCKETFHYESLETLGDSFLKYAV 1039
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
SQQLF YQN+HEGLLSVK+E+II NAAL KLGC+ +LPGFIR + FDPK WIIPG S
Sbjct: 1040 SQQLFNMYQNHHEGLLSVKREKIICNAALSKLGCDFRLPGFIRNDPFDPKTWIIPGVKSE 1099
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 1131
S++L ++++FNGRKIY G +K+K K VADVVEALIGAFLS GGE L+F+D IGIKV+
Sbjct: 1100 SFKL-EETVFNGRKIYTRGDRKLKRKVVADVVEALIGAFLSAGGEMAALLFMDWIGIKVN 1158
Query: 1132 FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
F +PY+RQF + LVNVR LESLL YSFRD SLLVEALTHGSYMLP++PRCYQRLE+
Sbjct: 1159 FNIIPYERQFIACPDNLVNVRFLESLLKYSFRDRSLLVEALTHGSYMLPDVPRCYQRLEY 1218
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGD+VLDYLIT++LY YPG+SPG LTDMRSASVNNDCYA+S++K LHKH+LHAS EL+
Sbjct: 1219 LGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDCYAMSAIKVQLHKHVLHASQELH 1278
Query: 1252 KRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
K I T+D F+ S S+FGWES +FPK LGDIIESLAGAIFVDSG ++E V++SIRPL
Sbjct: 1279 KHIVATLDKFDDQS-SSSFGWESEATFPKVLGDIIESLAGAIFVDSGYDKEAVWKSIRPL 1337
Query: 1312 LEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLD 1371
LEP++TP+T+ HP+REL E CQK +++ +K + SR G + +EV A+G + + +
Sbjct: 1338 LEPLVTPDTLTIHPIRELNELCQKMNYTKEKTL-SRNDGVTSCKIEVIADGVIHQFEYKG 1396
Query: 1372 A-DKKTAKKVACKEVLKSLR 1390
+ DKKTA ++ACK VL SL+
Sbjct: 1397 STDKKTATRLACKGVLHSLQ 1416
>gi|145331748|ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640404|gb|AEE73925.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1374
Score = 1567 bits (4057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/1320 (58%), Positives = 977/1320 (74%), Gaps = 17/1320 (1%)
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
+V QQAEA+KMHTDLKVG YWGDMGVDFWD +TWK+E+ K+EVLVMTP ILLD LR S
Sbjct: 66 LVCFTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHS 125
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ L+MIKVLI+DECHHA GKH YACIM EFYH+ L +G SN+PRIFGMTAS +K+K
Sbjct: 126 FLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTK-GE 184
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
+ YW+KIH+LETLMNSKVYTC +ESVL+ F+PFST FK+Y++ +IP L ++L
Sbjct: 185 NLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEKL 244
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
+ +KH SL LDLN + + + K++ +I+STL YCL +LG+ LA KAA+++S ++D
Sbjct: 245 ERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSLSASQND 304
Query: 318 FFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIE 377
F W +L+ F ++KKF SDASQ + +P G WS+ + + N ++GLLT K VCLIE
Sbjct: 305 SFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANING-NAEAGLLTLKTVCLIE 363
Query: 378 SLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
+LL Y +E+IRCIIFV+RVITAIVL+SLL+E+LP WKTKY+AGNNSG+Q Q+RKKQ
Sbjct: 364 TLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQ 423
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
NEIVE+FRRGLVN+IVATSILEEGLDVQSCNLVI FDP+ +CSFIQSRGRARMQNSDYL
Sbjct: 424 NEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYL 483
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATL 557
+MV+SGD TQSRL YL+ G +MR+E L H+ +PC PL + E + VESTG TL
Sbjct: 484 MMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDS-DEPLFRVESTGATVTL 542
Query: 558 SSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQA 617
SSSVSLIY YCSRLPSD YFKP P+F +NK+ G CTLYLP +CP++ V A+ N K LKQA
Sbjct: 543 SSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQA 602
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKI 677
CL+AC +LH++GAL+D+L+PD+VV + +QK YN E P YFPPELV+Q +
Sbjct: 603 VCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPET 662
Query: 678 TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQL 737
TYH YLI +K + + +++L R LE +I +F LE RG + V L ++G L
Sbjct: 663 TYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHL 722
Query: 738 IPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST----GQLIDW 793
+VL CRRFQITLFRV++DH+++ L E L+G LRD + +DYLL+PST LIDW
Sbjct: 723 TQEEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDW 782
Query: 794 KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGV 853
+ + +V + + NCST +RI+HTK G CTC + N+LV TPHNG +YC GV
Sbjct: 783 EVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGV 842
Query: 854 LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQ 913
L +LN NSL T+ N TY ++YEER+GIQL F EPLLNGR IF + +YL +++K+
Sbjct: 843 LNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKE 902
Query: 914 KEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQN 973
KE + ELPPELC +I++PIS+ YS+TF+PS+M R++SLL+A NLK +
Sbjct: 903 KEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPK 957
Query: 974 VTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKER 1033
V IPTIKVLEAITTKKC++ FHLESLETLGDSFLKYA QQLF+ +HEGLLS KK+
Sbjct: 958 VNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDG 1017
Query: 1034 IISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK 1093
+ISN LC+ GC+QKL GFIR E F+PK W++PG +S +Y L +D+L R IYV R+
Sbjct: 1018 MISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRN 1077
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRH 1153
+K K+VADVVE+LIGA+LS GGE L+F++ +GIKVDF QR + AE+LVNV +
Sbjct: 1078 LKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQRDSPIQAEKLVNVGY 1137
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+ESLLNYSF D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LS
Sbjct: 1138 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1197
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LTDMRSASVNN+CYAL +VK LHKHIL+ASH L+K I+ TV FE+ SL STFGWE
Sbjct: 1198 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1257
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
S SFPK LGD+IESLAGAIFVDSG N+EVVF SI+PLL MITPET++ HPVRELTE C
Sbjct: 1258 SDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELC 1317
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASF 1393
QK F + S+ + TVEV+A F HT +DKK AKK+A KEVL L+ S
Sbjct: 1318 QKWQFEL-----SKAKDFDSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1372
>gi|94450856|gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
Length = 1374
Score = 1563 bits (4046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1320 (58%), Positives = 976/1320 (73%), Gaps = 17/1320 (1%)
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
+V QQAEA+KMHTDLKVG YWGDMGVDFWD +TWK+E+ K+EVLVMTP ILLD LR S
Sbjct: 66 LVCFTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHS 125
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ L+MIKVLI+DECHHA GKH YACIM EFYH+ L +G SN+PRIFGMTAS +K+K
Sbjct: 126 FLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTK-GE 184
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
+ YW+KIH+LETLMNSKVYTC +ESVL+ F+PFST FK+Y++ +IP L ++L
Sbjct: 185 NLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEKL 244
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
+ +KH SL LDLN + + + K++ +I+STL YCL +LG+ LA KAA+++S ++D
Sbjct: 245 ERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSLSASQND 304
Query: 318 FFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIE 377
F W +L+ F ++KKF SDASQ + +P G WS+ + + N ++GLLT K VCLIE
Sbjct: 305 SFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANING-NAEAGLLTLKTVCLIE 363
Query: 378 SLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
+LL Y +E+IRCIIFV+RVITAIVL+SLL+E+LP WKTKY+AGNNSG+Q Q+RKKQ
Sbjct: 364 TLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQ 423
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
NEIVE+FRRGLVN+IVATSILEEGLDVQSCNLVI FDP+ +CSFIQSRGRARMQNSDYL
Sbjct: 424 NEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYL 483
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATL 557
+MV+SGD TQSR YL+ G +MR+E L H+ +PC PL + E + VESTG TL
Sbjct: 484 MMVESGDLLTQSRSMKYLSGGKRMREESLDHSLVPCPPLPDDS-DEPLFRVESTGATVTL 542
Query: 558 SSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQA 617
SSSVSLIY YCSRLPSD YFKP P+F +NK+ G CTLYLP +CP++ V A+ N K LKQA
Sbjct: 543 SSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVLKQA 602
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKI 677
CL+AC +LH++GAL+D+L+PD+VV + +QK YN E P YFPPELV+Q +
Sbjct: 603 VCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCYFPPELVSQFSAQPET 662
Query: 678 TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQL 737
TYH YLI +K + ++ +++L R LE +I +F LE RG + V L ++G L
Sbjct: 663 TYHFYLIRMKPNSPRNLHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHL 722
Query: 738 IPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST----GQLIDW 793
+VL CRRFQITLFRV++DH+++ L E L+G LRD + +DYLL+PST LIDW
Sbjct: 723 TREEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALDYLLVPSTHSHETSLIDW 782
Query: 794 KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGV 853
+ + +V + + NCST +RI+HTK G CTC + N+LV TPHNG +YC GV
Sbjct: 783 EVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGV 842
Query: 854 LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQ 913
L +LN NSL T+ N TY ++YEER+GIQL F EPLLNGR IF + +YL +++K+
Sbjct: 843 LNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKE 902
Query: 914 KEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQN 973
KE + ELPPELC +I++PIS+ YS+TF+PS+M R++SLL+A NLK +
Sbjct: 903 KEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKK-----SIPK 957
Query: 974 VTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKER 1033
V IPTIKVLEAITTKKC++ FHLESLETLGDSFLKYA QQLF+ +HEGLLS KK+
Sbjct: 958 VNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDG 1017
Query: 1034 IISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK 1093
+ISN LC+ GC+QKL GFIR E F+PK W++PG +S +Y L +D+L R IYV R+
Sbjct: 1018 MISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRN 1077
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRH 1153
+K K+VADVVE+LIGA+LS GGE L+F++ +GIKVD QR + AE+LVNV +
Sbjct: 1078 LKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKIQRDSPIQAEKLVNVGY 1137
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+ESLLNYSF D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT +LY+KYP LS
Sbjct: 1138 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1197
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LTDMRSASVNN+CYAL +VK LHKHIL+ASH L+K I+ TV FE+ SL STFGWE
Sbjct: 1198 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1257
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
S SFPK LGD+IESLAGAIFVDSG N+EVVF SI+PLL MITPET++ HPVRELTE C
Sbjct: 1258 SDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELC 1317
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASF 1393
QK F + S+ + TVEV+A F HT +DKK AKK+A KEVL L+ S
Sbjct: 1318 QKWQFEL-----SKAKDFDSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLKNSL 1372
>gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
Length = 2042
Score = 1534 bits (3971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 788/1397 (56%), Positives = 986/1397 (70%), Gaps = 89/1397 (6%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
M+ +ME++TT++VSA L FAR+YQ+EALE A+KQNTIVFLETGSGKTLIAIMLLRSYA
Sbjct: 729 MDADAMETETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYA 788
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
YL RKPSP VFLVP+VVLV QQAEA+KMHTDLKV
Sbjct: 789 YLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVV----------------------- 825
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
+VLVMTP ILLD LR S+ L+MIKVLI+DECHHA GKH YACIM
Sbjct: 826 QVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIM--------------- 870
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
+VYTC +ESVL+ F+PFST FK+Y
Sbjct: 871 -----------------------------------RVYTCENESVLAGFVPFSTPSFKYY 895
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG 300
++ +IP L ++L + +KH SL LDLN + + + K++ +I+STL YCL +LG
Sbjct: 896 QHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLG 955
Query: 301 VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSK 360
+ LA KAA+++S ++D F W +L+ F ++KKF SDASQ + +P G WS+ + +
Sbjct: 956 ILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANING 1015
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
N ++GLLT K VCLIE+LL Y +E+IRCIIFV+RVITAIVL+SLL+E+LP WKTK
Sbjct: 1016 -NAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTK 1074
Query: 421 YIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
Y+AGNNSG+Q Q+RKKQNEIVE+FRRGLVN+IVATSILEEGLDVQSCNLVI FDP+ +C
Sbjct: 1075 YVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNIC 1134
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
SFIQSRGRARMQNSDYL+MV+SGD TQSRL YL+ G +MR+E L H+ +PC PL +
Sbjct: 1135 SFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDS 1194
Query: 541 YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNC 600
E + VESTG TLSSSVSLIY YCSRLPSD YFKP P+F +NK+ G CTLYLP +C
Sbjct: 1195 -DEPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSC 1253
Query: 601 PIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP 660
P++ V A+ N K LKQA CL+AC +LH++GAL+D+L+PD+VV + +QK YN E P
Sbjct: 1254 PVKEVKAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQP 1313
Query: 661 IYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEV 720
YFPPELV+Q + TYH YLI +K + + +++L R LE +I +F LE
Sbjct: 1314 CYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLED 1373
Query: 721 ERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID 780
RG + V L ++G L +VL CRRFQITLFRV++DH+++ L E L+G LRD + +D
Sbjct: 1374 HRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALD 1433
Query: 781 YLLLPST----GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHN 836
YLL+PST LIDW+ + +V + + NCST +RI+HTK G CTC + N
Sbjct: 1434 YLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQN 1493
Query: 837 SLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGR 896
+LV TPHNG +YC GVL +LN NSL T+ N TY ++YEER+GIQL F EPLLNGR
Sbjct: 1494 ALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGR 1553
Query: 897 RIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
IF + +YL +++K+KE + ELPPELC +I++PIS+ YS+TF+PS+M R++SL
Sbjct: 1554 HIFTLHSYLHMAKKKKEKEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESL 1613
Query: 957 LLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
L+A NLK + V IPTIKVLEAITTKKC++ FHLESLETLGDSFLKYA QQLF
Sbjct: 1614 LIAYNLKK-----SIPKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLF 1668
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELN 1076
+ +HEGLLS KK+ +ISN LC+ GC+QKL GFIR E F+PK W++PG +S +Y L
Sbjct: 1669 QHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLV 1728
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+D+L R IYV R+ +K K+VADVVE+LIGA+LS GGE L+F++ +GIKVDF
Sbjct: 1729 NDTLPESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTK 1788
Query: 1137 YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 1196
QR + AE+LVNV ++ESLLNYSF D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+V
Sbjct: 1789 IQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSV 1848
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LDYLIT +LY+KYP LSPG LTDMRSASVNN+CYAL +VK LHKHIL+ASH L+K I+
Sbjct: 1849 LDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISR 1908
Query: 1257 TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
TV FE+ SL STFGWES SFPK LGD+IESLAGAIFVDSG N+EVVF SI+PLL MI
Sbjct: 1909 TVSEFEQSSLQSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMI 1968
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKT 1376
TPET++ HPVRELTE CQK F + S+ + TVEV+A F HT +DKK
Sbjct: 1969 TPETVKLHPVRELTELCQKWQFEL-----SKAKDFDSFTVEVKAKEMSFAHTAKASDKKM 2023
Query: 1377 AKKVACKEVLKSLRASF 1393
AKK+A KEVL L+ S
Sbjct: 2024 AKKLAYKEVLNLLKNSL 2040
>gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
Length = 2033
Score = 1531 bits (3965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/1390 (56%), Positives = 979/1390 (70%), Gaps = 89/1390 (6%)
Query: 8 SDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS 67
S TT++VSA L FAR+YQ+EALE A+KQNTIVF ETGSGKTLIAIMLLRSY+YL RKPS
Sbjct: 727 SLTTDQVSASPLHFARSYQVEALEKAIKQNTIVFFETGSGKTLIAIMLLRSYSYLFRKPS 786
Query: 68 PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTP 127
P VFLVP+VVLV QQAEA+KMHTDL+V +VLVMTP
Sbjct: 787 PCFCVFLVPQVVLVTQQAEALKMHTDLQVV-----------------------QVLVMTP 823
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
ILLD LR S+ L+MIKVLI+DECHHA GKH YACIM
Sbjct: 824 AILLDALRHSFLNLSMIKVLIVDECHHAGGKHPYACIM---------------------- 861
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
+VYTC +ESVL+ F+PFST +FK+Y++ IP
Sbjct: 862 ----------------------------RVYTCENESVLAGFVPFSTPRFKYYQHMGIPS 893
Query: 248 ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
+ L ++L + +KH SL LDL + + I K++S+I+STL YCL +LG+ LA KA
Sbjct: 894 SKRASLVEKLEKLMIKHRLSLATLDLKSSTVDSIEKRLSRISSTLTYCLDDLGILLAQKA 953
Query: 308 AETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGL 367
A+++S ++DF W +L+ T++KKF SDASQA + +P+G WS+ + + +++GL
Sbjct: 954 AQSLSASQNDFVLWGELNMSSVTLVKKFCSDASQAFLADIPNGLNWSVANING-KVEAGL 1012
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS 427
LT K VCLIE+LL Y +E+IRCIIFV+RVITAIVL+SLL+E+LP WKTKY+AGNNS
Sbjct: 1013 LTSKTVCLIETLLSYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNS 1072
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
G+Q Q+RKKQNEIVE+FRRGLVN+IVATSILEEGLDVQSCNLVI FDP+ +CSFIQSRG
Sbjct: 1073 GLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 1132
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH 547
RARMQNSDYL+MV+SGD TQSRL+ YL+ G +MR+E L H+ +PC PL + E F+
Sbjct: 1133 RARMQNSDYLMMVESGDLLTQSRLKKYLSGGKRMREESLHHSLVPCPPLPDDS-DELFFR 1191
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIA 607
VESTG TLSSSVSLIY YCSRLPSD YFKP P+F +NK+ G CTLYLP +CP++ V A
Sbjct: 1192 VESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKA 1251
Query: 608 QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPEL 667
Q N K LKQ CLEAC +LH++GAL+D+L+PD+VV + AQK YN E P YFPPEL
Sbjct: 1252 QANNKVLKQTVCLEACIQLHKVGALSDHLVPDMVVAETVAQKLEKIQYNPEQPCYFPPEL 1311
Query: 668 VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTV 727
V+Q + TYH YLI +K + +++L R LE +I F LE +G + V
Sbjct: 1312 VSQFSVQPETTYHFYLIRMKPSSQRNFHLNDVLLGTRVVLEDDIGNTGFRLEDHKGTIAV 1371
Query: 728 NLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST 787
L ++G L +VLLCRRFQITLFRV++DH++ L E L+G LRD + +DYLL+PST
Sbjct: 1372 TLSYVGAFHLTQEEVLLCRRFQITLFRVLLDHSVKNLMEALNGLLLRDGIALDYLLVPST 1431
Query: 788 ----GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPH 843
IDW+ + +V + ++NCS +RI+HTK G CTC + N+LV TPH
Sbjct: 1432 HSHETSPIDWEVIRSVNLTCHEALEKHVNCSINGASRILHTKDGLFCTCVVQNALVYTPH 1491
Query: 844 NGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQN 903
NG YC GVL ++NANS T+ N TY ++YEER+GIQL F EPLLNGR IF + N
Sbjct: 1492 NGYFYCTKGVLNNINANSFLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHN 1551
Query: 904 YLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
YL +++K+KE K ELPPELC +I++PIS+ YS+TF+PS+M R++SLL+A NLK
Sbjct: 1552 YLHMTKKKKEKEHDKEFVELPPELCHVILSPISVDVIYSYTFIPSVMQRIESLLIAYNLK 1611
Query: 964 NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNH 1023
+ V IPTIKVLEAITTKKCQ+ FHLESLETLGDSFLKYA QQLF+ +H
Sbjct: 1612 K-----SIPKVNIPTIKVLEAITTKKCQDQFHLESLETLGDSFLKYAVCQQLFQHCHTHH 1666
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG 1083
EGLLS KK+ +ISN LC+ GC+QKL GFIR E F+PK W++PG +S +Y L +D+L
Sbjct: 1667 EGLLSTKKDGMISNVMLCQFGCQQKLQGFIRNECFEPKGWMVPGQHSAAYALVNDTLPES 1726
Query: 1084 RKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQV 1143
R IYV R+ +K K+VADVVE+LIGA+LS GGE L+F++ +GIKVDF +R+ +
Sbjct: 1727 RNIYVASRRNLKRKSVADVVESLIGAYLSEGGELSALMFMNWVGIKVDFTTTKIERESPI 1786
Query: 1144 HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
AE+LVNV ++ESLLNYSF D SLLVEALTHGSYM+PEIPRCYQRLEFLGD+VLDYLIT
Sbjct: 1787 QAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITK 1846
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
+LY+KYP LSPG LTDMRSASVNN+CYAL +VK LHKHILHASH L+K I+ TV FE+
Sbjct: 1847 HLYDKYPCLSPGLLTDMRSASVNNECYALVAVKENLHKHILHASHVLHKHISRTVSEFEQ 1906
Query: 1264 LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
SL STFGWE SFPK LGD+IESLAGAIFVDSG N+EVVF SI+PLL MITPET++
Sbjct: 1907 SSLQSTFGWECDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKL 1966
Query: 1324 HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACK 1383
HPVRELTE CQK+ F + S+ TVEV+A F HT +DKK AKK+A K
Sbjct: 1967 HPVRELTELCQKSQFEL-----SKAKDFNYFTVEVKAKEMSFAHTAKASDKKMAKKLAYK 2021
Query: 1384 EVLKSLRASF 1393
EVL L+ S
Sbjct: 2022 EVLNLLKKSL 2031
>gi|147833654|emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
Length = 1296
Score = 1376 bits (3561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/1106 (63%), Positives = 858/1106 (77%), Gaps = 26/1106 (2%)
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA-----------EWSI 355
AAE C + D W QLD GE IIK F DA + + TY+PSG E S+
Sbjct: 199 AAEFSFCDDMDICCWGQLDLSGEEIIKNFNKDAYKVISTYLPSGTSNPELVXFQYRELSV 258
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
GDD + + +SG LT K++CL+ SLL+YR ++++RCI+FVERVITAIVLQ LLS+LLP+
Sbjct: 259 GDDLEADAESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLS 318
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
W+ YIAGN S +Q QSR+ QN +VEEFR+G+VNVIV+TSILEEGLDVQSCNLVI FDP
Sbjct: 319 GWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDP 378
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S TVCSFIQSRGRARMQNSDYLLMV+SGD T SRL YL SG MR+E L +ASLPC+P
Sbjct: 379 SATVCSFIQSRGRARMQNSDYLLMVRSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAP 438
Query: 536 LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLY 595
L + + E+FY VEST I TLSSS+ L+YFYCSRLPSDGYFKPTP+ IN++MG CT+Y
Sbjct: 439 LKSSLDDEEFYWVESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDMGTCTIY 498
Query: 596 LPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPY 655
LP +CPIQTV +GNIKTLKQ ACLEACK+LH+ GALTDNL+P IV E+ + N PY
Sbjct: 499 LPKSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEEAIVAQDENMPY 558
Query: 656 NAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVN 715
+ E Y+PPEL+N S +D YHCYLIEL Q + Y++S + IVLA+R+ELE ++ VN
Sbjct: 559 DDEQATYYPPELINPSLKDPVTPYHCYLIELBQKYEYEVSPQGIVLAVRSELEYDVGNVN 618
Query: 716 FDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRD 775
FDL+V+RG +TV++ ++G I L QVL+CR+FQITL RV++D +DK + D ++L +
Sbjct: 619 FDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRVLIDRAIDK--GVFDRYDLGN 676
Query: 776 NLEIDYLLLPSTGQ-----LIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLC 830
+ +DYL+LPST ++DWK + +V F +N S H M C F R+ HTKSG +C
Sbjct: 677 DQMVDYLMLPSTNSREIPSIVDWKCLGSVFFSHENASNH-MGC---FFPRM-HTKSGFVC 731
Query: 831 TCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDRE 890
+C + NS+V TPH Q YCITG+LG LN NS + NG + TYK++Y R+GI+L FD E
Sbjct: 732 SCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGLLTYKEYYXLRHGIELQFDGE 791
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIM 950
LL GRR+F VQNYL +CRQQK+KE S + ELPPELC I M+PIS+S YSF+ +PSIM
Sbjct: 792 KLLKGRRMFVVQNYLQRCRQQKEKELSNTTVELPPELCVIFMSPISISIIYSFSLIPSIM 851
Query: 951 HRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYA 1010
HR++SLLLAVNLKN+ L++C QN IPT KVLEAITTK CQE FHLESLETLGDSFLKYA
Sbjct: 852 HRIESLLLAVNLKNIHLNYCKQN-DIPTFKVLEAITTKHCQEGFHLESLETLGDSFLKYA 910
Query: 1011 ASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS 1070
ASQQLFKT+QN+HEGLLSVKKERIISNA+LCKLGC++KLPGFIR ESFDPK WII GD S
Sbjct: 911 ASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQS 970
Query: 1071 GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
S+ ++ L + RKIYV+ R+K+KSK +ADVVEALIGAFLSTGGE LIF+ +GI V
Sbjct: 971 RSHVFGEELLSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINV 1030
Query: 1131 DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLE 1190
DFV VPY+R F V +R VNV +LES+LNYSFRDPSLLVE+LTHGSYMLPEIPRCYQRLE
Sbjct: 1031 DFVKVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVESLTHGSYMLPEIPRCYQRLE 1090
Query: 1191 FLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
FLGDAVLDYL+T++LY+KYPG+SPG LTD+RSASVNNDCYA S+VK LH+HILH+S EL
Sbjct: 1091 FLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQEL 1150
Query: 1251 YKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
++ I +TV F+KL STFGWES +SFPK LGD+IESLAGAI VDS N+EVVFQSIRP
Sbjct: 1151 HRHIVVTVGBFDKLPXESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRP 1210
Query: 1311 LLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFL 1370
LLEP+ITPET++ HP REL E CQK H+ +K+ V S+ +GKA+VT+EV+ANG +HT
Sbjct: 1211 LLEPLITPETVKLHPARELXELCQKEHYXIKRVVVSQ-NGKASVTIEVEANGAKHKHTS- 1268
Query: 1371 DADKKTAKKVACKEVLKSLRASFPGT 1396
+DK+TA K+A KEVLKSL+ S T
Sbjct: 1269 TSDKRTAXKLASKEVLKSLKESIAQT 1294
Score = 227 bits (578), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 134/196 (68%), Gaps = 40/196 (20%)
Query: 1 MEPVSMESDTTEEV--SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS 58
MEPV M V + D LPFAR+YQ+EALE A+KQNTIVFLETGSGKTLIAIMLLR
Sbjct: 1 MEPVKMIGADGNNVGQTVDPLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRY 60
Query: 59 YAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS 118
YA+LLRKPSPF+AVFLVPKVVLVPQ
Sbjct: 61 YAHLLRKPSPFIAVFLVPKVVLVPQ----------------------------------- 85
Query: 119 KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS 178
VLVMTP ILL+GLR S+FKL+MIKVLI DECHHARGK YACIM EFYH + + +S
Sbjct: 86 ---VLVMTPAILLNGLRHSFFKLDMIKVLIFDECHHARGKDPYACIMKEFYHXQVRSNNS 142
Query: 179 NLPRIFGMTASPIKSK 194
NLPRIFGMTASPIK+K
Sbjct: 143 NLPRIFGMTASPIKTK 158
>gi|357115872|ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
distachyon]
Length = 1402
Score = 1231 bits (3186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1394 (46%), Positives = 916/1394 (65%), Gaps = 35/1394 (2%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T E D AR YQLEALE AL NT+ FL TGSGKTLIA++LLR+YA+ +R P+
Sbjct: 15 TEEAPKEDPQTIARWYQLEALERALCGNTVAFLGTGSGKTLIAVLLLRAYAHRVRSPARD 74
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
AVFLVP VVLV QQA I+ HTDL+V ++ GDM VD+WD TW+ + EVLVMTPQI
Sbjct: 75 FAVFLVPTVVLVDQQARVIEAHTDLRVDRFSGDMKVDYWDAPTWRRVVDDAEVLVMTPQI 134
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTA 188
LL+ L S+F+L I +LI DECH A+G H YACI+ EFYH L + + LPRIFGMTA
Sbjct: 135 LLNNLIHSFFRLQDIALLIFDECHRAKGNHPYACILKEFYHAQLNSRPQDPLPRIFGMTA 194
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
SP+ +K + Y ++I LE L+NSKVYT +ES LS +I ++T + Y IP
Sbjct: 195 SPVNTK-NLQPDTYLKRISQLENLLNSKVYTVDNESALSEYIQYATTRIVHYDDSIIPSN 253
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAA 308
Y H+ L ++ KH L+ +L + ++ ++++S+++ T LYC ++LG+WLA KAA
Sbjct: 254 SYNHVMSCLNRLKEKHLEVLKA-NLYGSSLKVAKERISRLHRTFLYCTADLGIWLASKAA 312
Query: 309 ETISCYESDFFAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGL 367
E S E W EQ++ E I+ + + + L +G IG+D + NL GL
Sbjct: 313 EVQSSNEQFLSFWGEQIEKDVEGFIRNYSEEVYRELSCCSKTG---HIGEDLEANLQDGL 369
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS 427
LT K+ CL+++LLEYR +D+RCI+FVERVIT++VL+SLLS + + W KY+ G S
Sbjct: 370 LTRKVHCLVQTLLEYRHKQDLRCIVFVERVITSVVLKSLLSTI-TQMSGWIVKYMTGGIS 428
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
G+ QSRK++ EI++ FRRG V++IVAT +LEEGLDV SCNLVI FDP TV SFIQSRG
Sbjct: 429 GLHSQSRKERTEILDSFRRGEVHLIVATQVLEEGLDVPSCNLVIRFDPPATVRSFIQSRG 488
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH 547
RARMQNSDY+L+V+ GD+ S+ E YLASG MR+E L AS C PL N + ED+Y
Sbjct: 489 RARMQNSDYVLLVRRGDAAALSKTEKYLASGQLMREESLRLASTMCQPLENPLCEEDYYR 548
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIA 607
VESTG T+++S+SLIY +CS+LPSD YFKP P+F INK CTLYLP + P+QTV
Sbjct: 549 VESTGATVTINTSISLIYLFCSKLPSDEYFKPLPRFSINKASCTCTLYLPKSSPVQTVST 608
Query: 608 QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPEL 667
+G + LK+ CL+AC++LH IGALTD+LLP++ + E Y E P YFP EL
Sbjct: 609 EGEVDVLKKEVCLKACRELHAIGALTDSLLPELGFPCEEEPDIVVEKYQHEQPAYFPEEL 668
Query: 668 VNQSPQDTKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT 726
V+ + + Y CY+I L + F + +I+LAM+ ++ S+ +F L + +T
Sbjct: 669 VDNWLSFSCLGIYICYMISL-EGFLQTTAPTDIILAMKCDMGSDFVSRSFKLYGTQDYVT 727
Query: 727 VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPS 786
V +K++G I L QV++ RRFQ ++ ++++ N I +E++ ++ I YLLLP
Sbjct: 728 VAIKYMGIIHLNQEQVIIARRFQTSILSLLIN------NAIKYYYEMQRSIGIVYLLLPL 781
Query: 787 TGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQ 846
IDW T+ P++ +K +C + ++ TK G LC C + NS++CTPHN +
Sbjct: 782 VSGKIDWCTMK-FSAPQEVNNKDVRHCHSCKEVDLLQTKDGLLCRCMLRNSIICTPHNSR 840
Query: 847 IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLS 906
+Y ITG L LNA SL +GS+ TY +++ R+G++L + +PLL ++ V+N+L
Sbjct: 841 LYAITGFLD-LNAKSLLHLRDGSILTYITYFKTRHGLRLTNENQPLLAASKLGQVRNFLH 899
Query: 907 KCRQQKQKEPSKISF--ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKN 964
K R K ++ S SF ELPPELCR++M+P+ YSF+ +PS+M+R+ +LL+ LK
Sbjct: 900 K-RNYKNEKVSSSSFAVELPPELCRVVMSPVPADILYSFSIIPSVMYRIHGMLLSAKLK- 957
Query: 965 MLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHE 1024
+ L MQ ++P +K+LEA+TTK+CQE+F ESLETLGDSFLKY +Q L+ Y+ +HE
Sbjct: 958 VQLGPRMQQFSVPDLKILEALTTKECQEEFSQESLETLGDSFLKYVTTQHLYTKYKLHHE 1017
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---DNSG--SYELNDDS 1079
G L+ K+ +ISNAALC+L C L G+I+ E F+PK W IPG D G S+ L+ +
Sbjct: 1018 GTLTKMKKNLISNAALCQLACNNNLVGYIQGEVFNPKGWFIPGLGYDTCGNKSFCLSSNG 1077
Query: 1080 LFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQ 1138
+++ RKI +KSK +AD VEALIGA+LS GE +F++ +G+ + F +P +
Sbjct: 1078 MYSLRKI------SIKSKRIADTVEALIGAYLSAAGEQAAFLFINSLGMDIGFHSEIPIE 1131
Query: 1139 RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 1198
R + E +N+R LE +L Y+F+DP LL+EALTHGSY + CYQRLEFLGDAVLD
Sbjct: 1132 RNIVIKPEEFINIRSLEIILGYNFKDPLLLIEALTHGSYQIAGPTACYQRLEFLGDAVLD 1191
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
+L+TVY YN YP +P LTD+RSASVNN+CYA +SVK GL+KHILH+S EL++++ +
Sbjct: 1192 HLVTVYYYNTYPECTPALLTDLRSASVNNNCYAHASVKAGLNKHILHSSTELHRKMAYYL 1251
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
++F + G + GWE+ PK LGD+IES+AGAI++DS ++E+V++S++PLLEP+ TP
Sbjct: 1252 ENFGQAFTGPSHGWEAGIGLPKVLGDVIESIAGAIYLDSKYDKEMVWRSMKPLLEPLATP 1311
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
ET+ PV+EL E+C + +S + + G ++V EVQ G ++ T DK A+
Sbjct: 1312 ETVERDPVKELQEFCDRRSYS-RSYTKTHEGGVSSVVAEVQVEGTIYSATRSGRDKTVAQ 1370
Query: 1379 KVACKEVLKSLRAS 1392
K+A K +L+ L+A+
Sbjct: 1371 KLAVKSLLEDLKAA 1384
>gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:
Full=Dicer-like protein 2a; Short=OsDCL2a
gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
gi|108709535|gb|ABF97330.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|113549035|dbj|BAF12478.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|215701504|dbj|BAG92928.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1410
Score = 1223 bits (3165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/1396 (46%), Positives = 905/1396 (64%), Gaps = 43/1396 (3%)
Query: 21 FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVV 79
AR YQLEALE A++ NT+ FLETGSGKTLIA+MLLR+YA+ +R+P S AVFLVP VV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ HTDL V ++ G+MGVDFWD ATW+ ++ EVLVMTPQILLD LR S+F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L I +LI DECHHARG YACI EFYH L + S+ LPRIFGM+AS I SK +
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK-DLN 211
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+Y ++I ++E LMNSKVYT SES LS +IPF++ K + I L+ ++ L
Sbjct: 212 PHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANILSCLN 271
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDF 318
+ KH +L+ L+ + E ++++SK++ T +YCL LGVWLA KAAE S E+
Sbjct: 272 RLNKKHIEALDR-KLHGSSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEVQSYEENSL 330
Query: 319 FAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS--GLLTEKIVCL 375
W E LD E I+ + + + L ++ +G IG+ KF DS G+LT K+ CL
Sbjct: 331 SFWGETLDKNVEGFIRNYSEEVHRELSCFLKNG---HIGE--KFPADSQDGILTPKVHCL 385
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I +LL+YR ++D+RCI+FVERVIT+IVL+ LLS + + W K++AG+ G+ QSRK
Sbjct: 386 IRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSI-HQMSGWNVKHMAGSRPGLLSQSRK 444
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
EIVE FR+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSD
Sbjct: 445 NHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSD 504
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
YLL+V GD Q+ E +LASG MR+E L S+ C PL N + + +Y VEST I
Sbjct: 505 YLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIV 564
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK 615
TL+SSV LI+F+CS+LPSD YF P P+F I+K G CTL+LP + P+QTV +G LK
Sbjct: 565 TLNSSVPLIHFFCSKLPSDEYFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILK 624
Query: 616 QAACLEACKKLHQIGALTDNLL----------PDIVVEKHDAQKRGNEPYNAEHPIYFPP 665
+ CL+AC++LH IGALTD+LL PDIVVE E P YFP
Sbjct: 625 ETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVEN-----------KIEQPSYFPE 673
Query: 666 ELVNQSPQDTKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR 724
E V+ +++ Y+CY I L + S +I+LA++ +L S+ +F L +
Sbjct: 674 EFVDNWRSFSRLGIYYCYKISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDN 732
Query: 725 LTVNLKHLGRIQLIPNQVLLCRRFQITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLL 783
+V +K++G I L QV++ RRFQ T+ +I D +L+ N I E++ + + YLL
Sbjct: 733 ASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLL 792
Query: 784 LPSTGQLIDWKTVATVLFP-RDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP 842
LP IDW ++ P + +KH +C + + ++ TK GP C C + NS+VCTP
Sbjct: 793 LPLVSGRIDWCSMKFSSSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTP 852
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQ 902
HN Y I+G L L+ANS +++G+V TYK +++ R+G+ L F+ +PLL G + V+
Sbjct: 853 HNNIFYVISGFLD-LDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVR 911
Query: 903 NYLSKCRQQKQKEPS-KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVN 961
N+L C +K+KEP + S ELPPELCRIIM+P+S + + F++VPSIM R+Q +LL+V
Sbjct: 912 NFLHNCYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVK 971
Query: 962 LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
LK + L +Q +P +K+LEA+TTKKCQE+F ESLETLGDSFLKY ++ LF Y+
Sbjct: 972 LK-VQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRL 1030
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLF 1081
HEG+L+ K+ +ISNAALC+L C L G+I E F+P+ WIIP + + S
Sbjct: 1031 QHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERDNKKISFL 1090
Query: 1082 NGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQ 1140
+Y + +KSK +AD VEALIGA+LST GE + + +G+ ++F +P +R+
Sbjct: 1091 APNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERK 1150
Query: 1141 FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
+ AE +NVR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L
Sbjct: 1151 ISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHL 1210
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
T Y Y+KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL+++++ ++
Sbjct: 1211 FTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEE 1270
Query: 1261 FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET 1320
F + G ++GWE+ PK LGD+IES+AGAI++DS C++EVV++S++ LLEP+ TPET
Sbjct: 1271 FGQSFTGPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPET 1330
Query: 1321 MRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
+ PV+ L E+C + F + + + G ++V V+A + T K AKK+
Sbjct: 1331 IEPDPVKGLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKL 1389
Query: 1381 ACKEVLKSLRASFPGT 1396
A K VLK L A T
Sbjct: 1390 ASKAVLKDLIAGHKDT 1405
>gi|222625282|gb|EEE59414.1| hypothetical protein OsJ_11564 [Oryza sativa Japonica Group]
Length = 1371
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1402 (45%), Positives = 883/1402 (62%), Gaps = 94/1402 (6%)
Query: 21 FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVV 79
AR YQLEALE A++ NT+ FLETGSGKTLIA+MLLR+YA+ +R+P S AVFLVP VV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ HTDL V ++ G+MGVDFWD ATW+ ++ EVLVMTPQILLD LR S+F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L I +LI DECHHARG YACI EFYH L + S+ LPRIFGM+AS I SK +
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK-DLN 211
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+Y ++I ++E LMNSKVYT SES LS +IPF++ K + I L+ ++ L
Sbjct: 212 PHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANILSCLN 271
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDF 318
+ KH +L+ L+ + E ++++SK++ T +YCL LGVWLA KAAE S E+
Sbjct: 272 RLNKKHIEALDR-KLHGSSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEVQSYEENSL 330
Query: 319 FAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS--GLLTEKIVCL 375
W E LD E I+ + + + L ++ +G IG+ KF DS G+LT K+ CL
Sbjct: 331 SFWGETLDKNVEGFIRNYSEEVHRELSCFLKNG---HIGE--KFPADSQDGILTPKVHCL 385
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I +LL+YR ++D+RCI+FVERVIT+IVL+ LLS + + W K++AG+ G+ QSRK
Sbjct: 386 IRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSI-HQMSGWNVKHMAGSRPGLLSQSRK 444
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
EIVE FR+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSD
Sbjct: 445 NHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSD 504
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
YLL+V GD Q+ E +LASG MR+E L S+ C PL N +Y
Sbjct: 505 YLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLY-------------- 550
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK 615
F P P+F I+K G CTL+LP + P+QTV +G LK
Sbjct: 551 ---------------------FNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILK 589
Query: 616 QAACLEACKKLHQIGALTDNLLP----------DIVVEKHDAQKRGNEPYNAEHPIYFPP 665
+ CL+AC++LH IGALTD+LLP DIVVE E P YFP
Sbjct: 590 ETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVEN-----------KIEQPSYFPE 638
Query: 666 ELVNQSPQDTKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR 724
E V+ +++ Y+CY I L + S +I+LA++ +L S+ +F L +
Sbjct: 639 EFVDNWRSFSRLGIYYCYKISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDN 697
Query: 725 LTVNLKHLGRIQLIPNQVLLCRRFQITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLL 783
+V +K++G I L QV++ RRFQ T+ +I D +L+ N I E++ + + YLL
Sbjct: 698 ASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLL 757
Query: 784 LPSTGQLIDW---KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC 840
LP IDW K ++ ++ +N KH +C + + ++ TK GP C C + NS+VC
Sbjct: 758 LPLVSGRIDWCSMKFSSSPIYEANN--KHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVC 815
Query: 841 TPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFH 900
TPHN Y I+G L L+ANS +++G+V TYK +++ R+G+ L F+ +PLL G +
Sbjct: 816 TPHNNIFYVISGFLD-LDANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVK 874
Query: 901 VQNYLSKCRQQKQKEPS-KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA 959
V+N+L C +K+KEP + S ELPPELCRIIM+P+S + + F++VPSIM R+Q +LL+
Sbjct: 875 VRNFLHNCYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLS 934
Query: 960 VNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTY 1019
V LK + L +Q +P +K+LEA+TTKKCQE+F ESLETLGDSFLKY ++ LF Y
Sbjct: 935 VKLK-VQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEY 993
Query: 1020 QNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---DNSGSYELN 1076
+ HEG+L+ K+ +ISNAALC+L C L G+I E F+P+ WIIP D G+ ++
Sbjct: 994 RLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI- 1052
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNV 1135
S +Y + +KSK +AD VEALIGA+LST GE + + +G+ ++F +
Sbjct: 1053 --SFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEI 1110
Query: 1136 PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
P +R+ + AE +NVR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA
Sbjct: 1111 PVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 1170
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
+LD+L T Y Y+KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL+++++
Sbjct: 1171 ILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMS 1230
Query: 1256 ITV-DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
+ SF G ++GWE+ PK LGD+IES+AGAI++DS C++EVV++S++ LLEP
Sbjct: 1231 YYLGQSFT----GPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEP 1286
Query: 1315 MITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ TPET+ PV+ L E+C + F + + + G ++V V+A + T
Sbjct: 1287 LATPETIEPDPVKGLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSAT-KSGPC 1344
Query: 1375 KTAKKVACKEVLKSLRASFPGT 1396
K AKK+A K VLK L A T
Sbjct: 1345 KLAKKLASKAVLKDLIAGHKDT 1366
>gi|251764794|sp|Q69LX2.2|DCL2B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:
Full=Dicer-like protein 2b; Short=OsDCL2b
Length = 1377
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1402 (45%), Positives = 885/1402 (63%), Gaps = 88/1402 (6%)
Query: 21 FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVV 79
AR YQLEALE A++ NT+ FLETGSGKTLIA+MLLR+YA+ +R+P S AVFLVP VV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ HTDL V ++ G+MGVDFWD ATW+ ++ EVLVMTPQILLD LR S+F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L I +LI DECHHARG YACI EFYH L + S+ LPRIFGM+AS I SK +
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK-DLN 211
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+ +Y ++I ++E LMNSKVYT SES LS +IPF++ K + I L+ ++ L
Sbjct: 212 QHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANILSCLN 271
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDF 318
+ KH +L+ L+ + E ++++SK++ T +YCL LGVWLA KAAE S E+
Sbjct: 272 RLTKKHIEALDR-KLHGSSLENAKQRISKLHRTFVYCLYNLGVWLAAKAAEVQSYEENSL 330
Query: 319 FAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS--GLLTEKIVCL 375
W E LD E I+ + + + L ++ +G IG+ KF DS G+LT K+ CL
Sbjct: 331 SFWGETLDKNVEGFIRNYSEEVHRELSCFLKNG---HIGE--KFPADSQDGILTPKVHCL 385
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I +LL+YR ++D+RCI+FV+RVIT+IVL+ LLS + + W K++AG+ G+ QSRK
Sbjct: 386 IRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSI-HQMSGWNVKHMAGSRPGLLSQSRK 444
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
EIVE FR+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSD
Sbjct: 445 NHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSD 504
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
YLL+V GD + + +LASG MR+E L S+ C PL N + + +Y VES
Sbjct: 505 YLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVES----- 559
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK 615
TP F I+K G CTL+LP + P+QTV +G LK
Sbjct: 560 ------------------------TPAFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILK 595
Query: 616 QAACLEACKKLHQIGALTDNLL----------PDIVVEKHDAQKRGNEPYNAEHPIYFPP 665
+ CL+AC++LH IGALTD+LL PDIVVE E P YFP
Sbjct: 596 ETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVEN-----------KIEQPSYFPE 644
Query: 666 ELVNQSPQDTKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR 724
E V+ +++ Y+CY I L + S +I+LA++ +L S+ +F L +
Sbjct: 645 EFVDNWRSFSRLGIYYCYKISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDN 703
Query: 725 LTVNLKHLGRIQLIPNQVLLCRRFQITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLL 783
+V +K++G I L QV++ RRFQ T+ +I D +L+ N I E++ + + YLL
Sbjct: 704 ASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLL 763
Query: 784 LPSTGQLIDW---KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC 840
LP IDW K ++ ++ +N KH +C + + ++ TK GP C C + NS+VC
Sbjct: 764 LPLVSGRIDWCSMKFSSSPIYEANN--KHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVC 821
Query: 841 TPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFH 900
TPHN Y I+G L L+ANS +++G+V TYK +++ R+G+ L F+ +PLL G +
Sbjct: 822 TPHNNIFYVISGFLD-LDANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVK 880
Query: 901 VQNYLSKCRQQKQKEPS-KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA 959
V+N+L +K+KEP + S ELPPELCRIIM+P+S + + F++VPSIM R+Q +LL+
Sbjct: 881 VRNFLHNYYYKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLS 940
Query: 960 VNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTY 1019
V LK + L +Q +P +K+LEA+TTKKCQE+F ESLETLGDSFLKY ++ LF Y
Sbjct: 941 VKLK-VQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEY 999
Query: 1020 QNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---DNSGSYELN 1076
+ HEG+L+ K+ +ISNAALC+L C L G+I E F+P+ WIIP D G+ ++
Sbjct: 1000 RLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI- 1058
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNV 1135
S +Y + +KSK +AD VEALIGA+LST GE + + +G+ ++F +
Sbjct: 1059 --SFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEI 1116
Query: 1136 PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
P +R+ + AE ++VR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA
Sbjct: 1117 PVERKISMKAEEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 1176
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
+LD+L T Y Y+KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL+++++
Sbjct: 1177 ILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMS 1236
Query: 1256 ITV-DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
+ SF G ++GWE+ PK LGD+IES+AGAI++DS C++EVV++S++ LLEP
Sbjct: 1237 YYLGQSFT----GPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEP 1292
Query: 1315 MITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ TPET+ PV+ L E+C + F + + + G ++V V+A + T
Sbjct: 1293 LATPETIEPDPVKGLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSAT-KSGPC 1350
Query: 1375 KTAKKVACKEVLKSLRASFPGT 1396
K AKK+A K VLK L A T
Sbjct: 1351 KLAKKLASKAVLKDLIAGHKDT 1372
>gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa Japonica Group]
gi|51091635|dbj|BAD36404.1| CAF protein-like [Oryza sativa Japonica Group]
Length = 1375
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/1402 (45%), Positives = 884/1402 (63%), Gaps = 90/1402 (6%)
Query: 21 FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVV 79
AR YQLEALE A++ NT+ FLETGSGKTLIA+MLLR+YA+ +R+P S AVFLVP VV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ HTDL V ++ G+MGVDFWD ATW+ ++ EVLVMTPQILLD LR S+F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L I +LI DECHHARG YACI EFYH L + S+ LPRIFGM+AS I SK +
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK-DLN 211
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+ +Y ++I ++E LMNSKVYT SES LS +IPF++ K + I L+ ++ L
Sbjct: 212 QHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANILSCLN 271
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDF 318
+ KH +L+ L+ + E ++++SK++ T +YCL LGVWLA KAAE S E+
Sbjct: 272 RLTKKHIEALDR-KLHGSSLENAKQRISKLHRTFVYCLYNLGVWLAAKAAEVQSYEENSL 330
Query: 319 FAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS--GLLTEKIVCL 375
W E LD E I+ + + + L ++ +G IG+ KF DS G+LT K+ CL
Sbjct: 331 SFWGETLDKNVEGFIRNYSEEVHRELSCFLKNG---HIGE--KFPADSQDGILTPKVHCL 385
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I +LL+YR ++D+RCI+FV+RVIT+IVL+ LLS + + W K++AG+ G+ QSRK
Sbjct: 386 IRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSI-HQMSGWNVKHMAGSRPGLLSQSRK 444
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
EIVE FR+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSD
Sbjct: 445 NHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSD 504
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
YLL+V GD + + +LASG MR+E L S+ C PL N + + +Y VEST
Sbjct: 505 YLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVEST---- 560
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK 615
F I+K G CTL+LP + P+QTV +G LK
Sbjct: 561 ---------------------------FDIDKASGTCTLHLPKSSPVQTVNVEGEGSILK 593
Query: 616 QAACLEACKKLHQIGALTDNLL----------PDIVVEKHDAQKRGNEPYNAEHPIYFPP 665
+ CL+AC++LH IGALTD+LL PDIVVE E P YFP
Sbjct: 594 ETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVEN-----------KIEQPSYFPE 642
Query: 666 ELVNQSPQDTKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR 724
E V+ +++ Y+CY I L + S +I+LA++ +L S+ +F L +
Sbjct: 643 EFVDNWRSFSRLGIYYCYKISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDN 701
Query: 725 LTVNLKHLGRIQLIPNQVLLCRRFQITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLL 783
+V +K++G I L QV++ RRFQ T+ +I D +L+ N I E++ + + YLL
Sbjct: 702 ASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLL 761
Query: 784 LPSTGQLIDW---KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC 840
LP IDW K ++ ++ +N KH +C + + ++ TK GP C C + NS+VC
Sbjct: 762 LPLVSGRIDWCSMKFSSSPIYEANN--KHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVC 819
Query: 841 TPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFH 900
TPHN Y I+G L L+ANS +++G+V TYK +++ R+G+ L F+ +PLL G +
Sbjct: 820 TPHNNIFYVISGFLD-LDANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVK 878
Query: 901 VQNYLSKCRQQKQKEPS-KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA 959
V+N+L +K+KEP + S ELPPELCRIIM+P+S + + F++VPSIM R+Q +LL+
Sbjct: 879 VRNFLHNYYYKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLS 938
Query: 960 VNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTY 1019
V LK + L +Q +P +K+LEA+TTKKCQE+F ESLETLGDSFLKY ++ LF Y
Sbjct: 939 VKLK-VQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEY 997
Query: 1020 QNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---DNSGSYELN 1076
+ HEG+L+ K+ +ISNAALC+L C L G+I E F+P+ WIIP D G+ ++
Sbjct: 998 RLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI- 1056
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNV 1135
S +Y + +KSK +AD VEALIGA+LST GE + + +G+ ++F +
Sbjct: 1057 --SFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEI 1114
Query: 1136 PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
P +R+ + AE ++VR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA
Sbjct: 1115 PVERKISMKAEEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 1174
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
+LD+L T Y Y+KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL+++++
Sbjct: 1175 ILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMS 1234
Query: 1256 ITV-DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
+ SF G ++GWE+ PK LGD+IES+AGAI++DS C++EVV++S++ LLEP
Sbjct: 1235 YYLGQSFT----GPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEP 1290
Query: 1315 MITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ TPET+ PV+ L E+C + F + + + G ++V V+A + T
Sbjct: 1291 LATPETIEPDPVKGLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSAT-KSGPC 1348
Query: 1375 KTAKKVACKEVLKSLRASFPGT 1396
K AKK+A K VLK L A T
Sbjct: 1349 KLAKKLASKAVLKDLIAGHKDT 1370
>gi|218193216|gb|EEC75643.1| hypothetical protein OsI_12390 [Oryza sativa Indica Group]
Length = 1318
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1373 (44%), Positives = 851/1373 (61%), Gaps = 90/1373 (6%)
Query: 54 MLLRSYAYLLRKP-SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT 112
MLLR+YA+ +R+P S AVFLVP VVLV QQA ++ HTDL V ++ G+MGVDFWD AT
Sbjct: 1 MLLRAYAHRVRRPDSRRFAVFLVPTVVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAAT 60
Query: 113 WKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL 172
W+ ++ EVLVMTPQILLD LR S+F+L I +LI DECH ARG YACI EFYH
Sbjct: 61 WRSQLEDGEVLVMTPQILLDNLRHSFFRLQDIALLIFDECHRARGNAPYACIFKEFYHPQ 120
Query: 173 LETGDSN-LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIP 231
L + S+ LPRIFGM+A+ I SK ++ +Y ++I ++E LMNSKVYT SES LS +IP
Sbjct: 121 LNSSASDPLPRIFGMSATLIYSK-DLNQHNYSKQISEIENLMNSKVYTVDSESALSEYIP 179
Query: 232 FSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINST 291
F++ K + I L+ ++ L + KH +L+ L+ + E ++++SK++ T
Sbjct: 180 FASTKIVHFDDSNISSELHANILSCLNGLTEKHIEALDR-KLHGSSLENAKRRISKLHHT 238
Query: 292 LLYCLSELGVWLALKAAETISCYESDFFAW-EQLDGFGETIIKKFGSDASQALVTYVPSG 350
+YCL LGVWLA KAAE S E+ W E LD E I+ + + + L ++ +G
Sbjct: 239 FVYCLYNLGVWLAAKAAEVQSYEENSLSFWGETLDKNVEGFIRNYSEEVHRELSCFLKNG 298
Query: 351 AEWSIGDDSKFNLDS--GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
IG+ KF DS G+LT K+ CLI +LL+YR ++D+RCI+FV+RVIT+IVL+ LLS
Sbjct: 299 ---HIGE--KFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLS 353
Query: 409 ELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
+ + W K++AG+ G+ QSRK EIVE FR+G V++I+AT ILEEGLDV SCN
Sbjct: 354 SI-HQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCN 412
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS--------GDSTTQSRLENYLASGNK 520
LVI FDPS TVCSFIQSRGRARM+NSDYLL++ GD + + +LASG
Sbjct: 413 LVIRFDPSATVCSFIQSRGRARMENSDYLLLIGRHVFNFVALGDVEAHTNAKKFLASGQI 472
Query: 521 MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
MR+E L S+ C PL N +Y FKP
Sbjct: 473 MREESLRLGSISCQPLENTLY-----------------------------------FKPL 497
Query: 581 PKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP-- 638
P+F I+K G CTL+LP + P+QTV +G LK+ CL+AC++LH IGALTD+LLP
Sbjct: 498 PRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDSLLPEL 557
Query: 639 --------DIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKI-TYHCYLIELKQH 689
DIVVE E P YFP E V+ +++ Y+CY I L +
Sbjct: 558 DVPCDEEPDIVVEN-----------KIEQPSYFPEEFVDNWRSFSRLGIYYCYKISL-EG 605
Query: 690 FNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQ 749
S +I+LA++ +L S+ +F L + +V +K++G I L QV++ RRFQ
Sbjct: 606 CPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQ 665
Query: 750 ITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDW---KTVATVLFPRDN 805
T+ +I D +L+ N I E++ + + YLLLP IDW K ++ ++ +N
Sbjct: 666 TTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANN 725
Query: 806 GSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR 865
KH +C + + ++ TK GP C C + NS+VCTPHN Y I+G L L+ANS +
Sbjct: 726 --KHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANSCLPQ 782
Query: 866 NNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPS-KISFELP 924
++G V TYK +++ R+G+ L F+ +PLL G + +N+L C +K+KEP + S ELP
Sbjct: 783 HDGIVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKARNFLHNCYSKKEKEPGDRYSVELP 842
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PELCRIIM+P+S + + F++VPSIM R+Q +LL+V LK + L +Q +P +K+LEA
Sbjct: 843 PELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLGPTVQQFDVPVLKILEA 901
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
+TTKKCQE+F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K+ +ISNAALC+L
Sbjct: 902 LTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLA 961
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
C L G+I E F+P+ WIIP + + S +Y + +KSK +AD VE
Sbjct: 962 CSSNLVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKMSIKSKRIADSVE 1021
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQVHAERLVNVRHLESLLNYSFR 1163
ALIGA+LST GE + + +G+ ++F +P +R+ + AE +NVR LE +L Y F
Sbjct: 1022 ALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINVRSLEGMLGYKFN 1081
Query: 1164 DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSA 1223
D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+KYP +P LTD+RSA
Sbjct: 1082 DSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSA 1141
Query: 1224 SVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALG 1283
SVNN+CYA ++VK GL+KHILH+S EL+++++ ++ F + G ++GWE+ PK LG
Sbjct: 1142 SVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLG 1201
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKP 1343
D+IES+AGAI++DS C++EVV++S++ LLEP+ TPET+ PV+ L E+C + F +
Sbjct: 1202 DVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYE 1261
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFPGT 1396
+ + G ++V V+A + T K AKK+A K VLK L A T
Sbjct: 1262 -KNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLKDLIAGHKDT 1313
>gi|242033791|ref|XP_002464290.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
gi|241918144|gb|EER91288.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
Length = 1385
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1415 (43%), Positives = 869/1415 (61%), Gaps = 102/1415 (7%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK-PSPFVAVFLVPKVVL 80
AR YQLEALE AL NT+VFLETG+GKTLIA++LLR +A +R P P AVFLVP VVL
Sbjct: 16 ARWYQLEALERALAGNTLVFLETGAGKTLIAVLLLRRFANRIRSSPPPCFAVFLVPTVVL 75
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQA ++ HTDL V +++G+MGVDFW+ W++ + EVLVMTPQILLD LR S+F+
Sbjct: 76 VSQQARVVRAHTDLTVAEFFGEMGVDFWNADKWRDMVDGAEVLVMTPQILLDNLRHSFFR 135
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSSE 199
L I +LI DECHHA G YACI EFYH L + S+ +PRIFGMTAS I SK + +
Sbjct: 136 LRDIPLLIFDECHHATGNSPYACIFKEFYHPQLNSRPSDPIPRIFGMTASLINSKDLARD 195
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ Y KI +LE LMN+KVYT ASES L +IPF+T + Y + LY+H L
Sbjct: 196 K-YSMKISELENLMNAKVYTVASESELLQYIPFATTRIIEYDDYIVKSELYSHTIRCLDK 254
Query: 260 IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI-SCYESDF 318
+E KH L+ L+ + E K++ K+N+ LYC+S+LGVWLA KAAE + S ES
Sbjct: 255 LEAKHLEILKG-KLHGSYLENAEKRIKKLNAMFLYCISDLGVWLAAKAAEILQSNKESCV 313
Query: 319 FAW-----EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIV 373
W ++++GF I ++ S+ ++ G + IG+D +L GLL K+
Sbjct: 314 SFWGEKLDDEVEGFIRNYIGDVNNELSEIILKMTKRGLQRHIGEDFDADLQDGLLKSKVY 373
Query: 374 CLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS 433
LI+SLLEYR V+D+RCI+FV+RVIT+IVL++LLS + + W +Y+AG N G+Q QS
Sbjct: 374 FLIKSLLEYRHVQDLRCIVFVKRVITSIVLEALLSTI-NQMSGWSVRYMAGKNFGLQYQS 432
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT----VCSFIQSRGRA 489
R EIV+ FR G V++I+AT ILEEGLDV SCNL+I FD + T C F R +
Sbjct: 433 RNTHVEIVDSFRSGKVHLIIATQILEEGLDVPSCNLIIRFDQAATNVDGGCLFDGVRDTS 492
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
+ GD+ S+ E +L SG MR+E S PL N + E+FY V+
Sbjct: 493 -------VFCFDGGDANALSKTEEFLESGQIMREESQRLESTFYQPLPNTLCNEEFYGVQ 545
Query: 550 STGTIATLSSSVSLIYFYCSRLPSD---------------------GYFKPTPKFHINKE 588
STG I TL+SSV LIYF+CS+LPSD YF P P+F+I+K
Sbjct: 546 STGAIVTLNSSVQLIYFFCSKLPSDESVFFLRLDNVFFWFIQQNISWYFNPLPRFNIDKA 605
Query: 589 MGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQ 648
+G CTL+LP + P+QT+ A+G I +K+ CL AC++LH +GALTD LLP+ V D
Sbjct: 606 LGTCTLHLPMSSPVQTIYAEGEISIIKRVVCLNACRELHAVGALTDYLLPESSVPCEDEP 665
Query: 649 KRGNEPYNAEHPIYFPPELV-NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTEL 707
+ Y E P YFP +L+ N + Y+CY I L + + + IVLA++ +L
Sbjct: 666 DIVVDKYKEEQPDYFPEQLMDNWLSFCHRGLYYCYKISL-EGCSETTTPAEIVLAVKCDL 724
Query: 708 ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEI 767
S+ F L + L+ ++++G I L QV++ RRFQ + +++ +L +
Sbjct: 725 GSDFISTTFKLWGVQDYLSFTIRYVGVIHLNQEQVIVARRFQTRILSLLISKDLSE---- 780
Query: 768 LDGFELRDNLEID------YLLLPSTGQLIDWKTV--ATVLFPRDN--GSKHNMNCSTMF 817
DG ++ LE+ YLLLP IDW ++ ++ D S+H+ +C
Sbjct: 781 -DGNSIKSLLEMQVSSGAVYLLLPVVSGKIDWCSIKFSSSEMHEDTIMDSRHSHSCK--- 836
Query: 818 NARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHY 877
+ ++ TK GP C C + NS+V TPHNG +Y ++G+L LNANS SV +YK H+
Sbjct: 837 DTGLLQTKGGPFCPCMLQNSIVSTPHNGMLYAVSGLLLDLNANSPMRE---SVLSYKTHF 893
Query: 878 EERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISL 937
+E +G+ L + +PLL ++ V+N L + +K+KE + + FELPPELC ++MAP+S
Sbjct: 894 KESHGLDLKCEDQPLLRASKLVKVRNILHERNYKKEKESTNV-FELPPELCIVVMAPVSA 952
Query: 938 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLE 997
+T FTF+PSIM+R+Q +LL+VNLK L M+ IP +KVLEA+T KKC+E+F E
Sbjct: 953 NTLRCFTFIPSIMYRIQCMLLSVNLKTQL-GPSMKQFDIPALKVLEALTAKKCKEEFSQE 1011
Query: 998 SLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTES 1057
SLETLGDSFLK A +++ L L + G+IR+E+
Sbjct: 1012 SLETLGDSFLKAWAFAA-------------------VVNCGILFLLWRSDQAKGYIRSET 1052
Query: 1058 FDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
F+P+ WIIPG + +DS GR + +K+KSK +AD VEALIGA+LS GE
Sbjct: 1053 FNPETWIIPG-------VGNDSC--GRSL-----RKLKSKRIADSVEALIGAYLSAAGEQ 1098
Query: 1118 VGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
+FL +G+ ++F +P +R+ ++AE +N+R LE +L+Y+F DPSLL+EALTHGSY
Sbjct: 1099 AAYLFLKSLGMDIEFHKMPVERKITINAENFINLRSLELMLDYNFSDPSLLLEALTHGSY 1158
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
+ CYQRLEFLGDAVLD++ T Y Y++YP +P LTD+RSASVNN CYA ++VK
Sbjct: 1159 QIAGTTACYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKA 1218
Query: 1238 GLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDS 1297
GLHKHILH+S L+K++ +D FE+ G + GWE+ PK LGD+IES+AGAI++D+
Sbjct: 1219 GLHKHILHSSSALHKKMADYLDKFEQSFSGPSHGWEAGICLPKVLGDVIESIAGAIYIDT 1278
Query: 1298 GCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVE 1357
+++VV++ ++ LLEP+ TP+T+ PV+EL E+C S+K VA R +V VE
Sbjct: 1279 KNDKKVVWRKMKRLLEPLATPDTLEIDPVKELHEFCDPKTCSIKYTVA-REDRVTSVAVE 1337
Query: 1358 VQANGRLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
VQ G ++ T K+ AKK+A K VLK ++A+
Sbjct: 1338 VQTKGTTYKATRTGLTKRDAKKLAAKSVLKDMKAA 1372
>gi|41469333|gb|AAS07189.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 1017
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1029 (46%), Positives = 664/1029 (64%), Gaps = 35/1029 (3%)
Query: 385 VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEF 444
++D+RCI+FVERVIT+IVL+ LLS + + W K++AG+ G+ QSRK EIVE F
Sbjct: 2 MQDLRCIVFVERVITSIVLEHLLSSI-HQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESF 60
Query: 445 RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
R+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSDYLL+V GD
Sbjct: 61 RKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGD 120
Query: 505 STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLI 564
Q+ E +LASG MR+E L S+ C PL N + + +Y VEST I TL+SSV LI
Sbjct: 121 VEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLI 180
Query: 565 YFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACK 624
+F+CS+LPSD YF P P+F I+K G CTL+LP + P+QTV +G LK+ CL+AC+
Sbjct: 181 HFFCSKLPSDEYFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQ 240
Query: 625 KLHQIGALTDNLL----------PDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQD 674
+LH IGALTD+LL PDIVVE E P YFP E V+
Sbjct: 241 ELHAIGALTDSLLPELDVPCDEEPDIVVEN-----------KIEQPSYFPEEFVDNWRSF 289
Query: 675 TKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLG 733
+++ Y+CY I L + S +I+LA++ +L S+ +F L + +V +K++G
Sbjct: 290 SRLGIYYCYKISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVG 348
Query: 734 RIQLIPNQVLLCRRFQITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLID 792
I L QV++ RRFQ T+ +I D +L+ N I E++ + + YLLLP ID
Sbjct: 349 IIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRID 408
Query: 793 W---KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYC 849
W K ++ ++ +N KH +C + + ++ TK GP C C + NS+VCTPHN Y
Sbjct: 409 WCSMKFSSSPIYEANN--KHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYV 466
Query: 850 ITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCR 909
I+G L L+ANS +++G+V TYK +++ R+G+ L F+ +PLL G + V+N+L C
Sbjct: 467 ISGFLD-LDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCY 525
Query: 910 QQKQKEPS-KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 968
+K+KEP + S ELPPELCRIIM+P+S + + F++VPSIM R+Q +LL+V LK + L
Sbjct: 526 SKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLK-VQLG 584
Query: 969 HCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
+Q +P +K+LEA+TTKKCQE+F ESLETLGDSFLKY ++ LF Y+ HEG+L+
Sbjct: 585 PTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILT 644
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYV 1088
K+ +ISNAALC+L C L G+I E F+P+ WIIP + + S +Y
Sbjct: 645 KMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYS 704
Query: 1089 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQVHAER 1147
+ +KSK +AD VEALIGA+LST GE + + +G+ ++F +P +R+ + AE
Sbjct: 705 QRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEE 764
Query: 1148 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
+NVR LE +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+
Sbjct: 765 FINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYS 824
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S EL+++++ ++ F + G
Sbjct: 825 KYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTG 884
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
++GWE+ PK LGD+IES+AGAI++DS C++EVV++S++ LLEP+ TPET+ PV+
Sbjct: 885 PSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVK 944
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
L E+C + F + + + G ++V V+A + T K AKK+A K VLK
Sbjct: 945 GLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLK 1003
Query: 1388 SLRASFPGT 1396
L A T
Sbjct: 1004 DLIAGHKDT 1012
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1464 (34%), Positives = 782/1464 (53%), Gaps = 124/1464 (8%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
M S + +TEE D AR YQL+ + A+++N +V+L TG GKT IA++L+
Sbjct: 1 MGETSAAAASTEE-PKDPRTIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLIYELG 59
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
+L+RKPS V +FL P + LV QQA I T+ KV Y+G+ G D W++EM +
Sbjct: 60 HLIRKPSSDVCIFLAPTIPLVRQQAAVISNSTNFKVQSYYGN-GKSSRDHQDWEKEMRES 118
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARG--KHQYACIMTEFYHRLLETGDS 178
EVLVMTPQILL LR + +++ I +LI DECHHA+ +H YA IM EFY DS
Sbjct: 119 EVLVMTPQILLYNLRHCFIRMSSIALLIFDECHHAQAHKRHPYAQIMKEFY-------DS 171
Query: 179 NL---PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESV-LSNFIPFST 234
N PR+FGMTASP+ K S++ +Y + I+ LE L+++KV C+ ++V L + I F
Sbjct: 172 NAVKPPRVFGMTASPVMGKGGSNKLNYTKCINSLEELLHAKV--CSVDNVELESVIAF-- 227
Query: 235 AKFKFYKYDEIPHA-LYTHLADELAMIELKHTRSL-ENL-DLNEAQAELIRKKVSKINST 291
+ Y Y + H+ L EL ++L+ + E+L D ++Q +L K + +++
Sbjct: 228 PDMEVYPYGPVSHSNLTVTYIKELDDLKLQSECIVRESLYDFKDSQKKL--KSLWRLHGN 285
Query: 292 LLYCLSELGVWLALKAAETISCYESDFFAWEQLD--GFGETIIKKFGSDASQALVTYVPS 349
L++CL ELG + AL+AA + ++ D F +++D G + + + A L +
Sbjct: 286 LIFCLQELGSFGALQAARNLLSFDVDAFDKKEVDINGNSTRFMHHYLNKAVSVLSCNILD 345
Query: 350 GAEWSIGDDSKFNLD---SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
G D F+L+ L + K LI L YR E+++CIIFV+R+ A + +
Sbjct: 346 GTH-----DDSFDLEMLEEPLFSNKFAVLINVLSRYRLEENMKCIIFVKRIAVARAISHI 400
Query: 407 LSELLPRHCT--WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
+ L C WK +++ G +SG++ SR K ++IVE+F G VN++VATS+ EEGLD+
Sbjct: 401 IRNL---KCLDFWKCEFLVGCHSGLKNMSRNKMDDIVEKFSSGEVNLLVATSVGEEGLDI 457
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
Q+C LV+ FD TV SFIQSRGRARM S Y+++++ G+ + + L NY+A + M +E
Sbjct: 458 QTCCLVVRFDLPETVASFIQSRGRARMTISKYVVLLERGNQSQEKLLNNYIAGESIMNEE 517
Query: 525 VLSHASLPCSPLNNHMYG---EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
+ S S N M+ E+ Y V TG + + SVSL++ YC LPSD +F P+P
Sbjct: 518 IDSRTS-------NDMFDYLEENTYRVNHTGASISTACSVSLLHRYCYNLPSDMFFNPSP 570
Query: 582 K-FHINKEMG-ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLL 637
F+I+ G IC + LP N + + Q + K+ ACL+AC K H++GALTD LL
Sbjct: 571 AFFYIDDTEGIICRVILPPNAAFRQMDGQPCQSKDEAKRDACLKACMKFHELGALTDFLL 630
Query: 638 PDIVVEKHDAQKRGNEPYNAE---------HPIYFPPELV-NQSPQDTKITYHCYLIELK 687
P K+ A N E H + P L ++ QD + H Y +
Sbjct: 631 PGPGSRKNKASSPNGSASNKEEDDSLREELHEMLIPSVLKPSRCKQDCLLDLHFYYFKFF 690
Query: 688 QHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCR 746
D + L + L E +K+ DL + RGR+ +KHLG + Q++L R
Sbjct: 691 P-IPADRHYQMFGLFVINPLPEEAEKLEVDLHLARGRIVKTGIKHLGTMVFDKEQMILAR 749
Query: 747 RFQITLFRVIMDHNLDKLNEILDGFELRDNLEID---YLLLPSTGQ------LIDWKTVA 797
FQ ++++D + ++++ + D LEI YLLLP + +IDW TV
Sbjct: 750 NFQEMFLKILLDRSEFTSSDVILCND--DTLEISSTFYLLLPIKQKCCGDIFVIDWPTVV 807
Query: 798 TVLFP---RD--NGSKHNMNCSTMFNARI-----VHTKSGPLCTCKIHNSLVCTPHNGQI 847
L RD + S H S + N + V++++ + SL+ PHN
Sbjct: 808 RCLSSPVFRDPVDVSVHG---SYIPNESLRLLDEVYSRT------DVVGSLIFVPHNNTF 858
Query: 848 YCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-S 906
+ I +L LN S F NG+ TY++HY ER+GI+L +PLL +++F++ N L
Sbjct: 859 FIIDVILDKLNGRSEF---NGA--TYEEHYRERFGIELSHPEQPLLKAKQLFNLHNLLHD 913
Query: 907 KCRQQKQKEPSKIS---FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
+ R+ S++ ELPPELC + + S S + +PS+M RL++ L+A+ LK
Sbjct: 914 RLRETTDSRGSELVEHFVELPPELCSLKITGFSKDMSSSLSLLPSLMCRLENFLVAIELK 973
Query: 964 NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNH 1023
+++L + I +LEAITT++C E LE E LGD+FLKY + F +Y+
Sbjct: 974 DLMLSSFPEASQISASAILEAITTERCLERISLERFEVLGDAFLKYVVGRHNFMSYEGLD 1033
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---------DNSGSYE 1074
EG L+ ++ I++N+ L +L ++ L +IR + F+P + G D S
Sbjct: 1034 EGQLTRRRSDIVNNSNLHELSVKRNLQVYIRDQQFEPTQFFALGRPCKVVCHADMEVSIH 1093
Query: 1075 ---LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 1131
++ D N + KT+ADVVE+L+GAFL GG FL +GI VD
Sbjct: 1094 QKNIDPDRPENCNVRCTKSHHWLHKKTIADVVESLLGAFLVEGGFKAAFAFLHWVGIDVD 1153
Query: 1132 FVNVPYQRQFQVHA-----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 1186
F + R + L+NV LE L+ Y F+ L++EA H S+ CY
Sbjct: 1154 FEDSALYRVLNASSINLSLMNLINVAELEELIGYKFKHKGLIIEAFVHPSFN-KHSGGCY 1212
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA 1246
Q+LEFLGDAVL+YL+T YLY+ YP L PG +TD++S +V ND +A +++ +HK+I+
Sbjct: 1213 QKLEFLGDAVLEYLMTSYLYSAYPDLKPGEITDLKSLAVCNDSFAYVAIQKCIHKYIIKD 1272
Query: 1247 SHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQ 1306
S+ L K ++ +++ KL S + PK LGDI+ES A+ +DSG N V++
Sbjct: 1273 SNHLTKAVS-KFENYIKLP-NSEKDLVEEPACPKVLGDIVESCVAAVLLDSGFNLNYVWK 1330
Query: 1307 SIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFE 1366
+ LL+P+++ M +P+RE+ E CQ N + P + G+ V VEV N +
Sbjct: 1331 LVLMLLKPVLSFSGMHMNPMREIRELCQCNELELGLPKPMKADGEYHVKVEVNINSTMIS 1390
Query: 1367 HTFLDADKKTAKKVACKEVLKSLR 1390
T + + K A+K+A +E L L+
Sbjct: 1391 CTAANRNSKVARKLAARETLSKLK 1414
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/1441 (34%), Positives = 766/1441 (53%), Gaps = 108/1441 (7%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQL+ + A+++N IV+L TG GKT IA++L+ +L+RKPS V +FL P
Sbjct: 25 DPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLAP 84
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+ LV QQA I TD KV Y+G+ G + D W+ +M + EVLVMTPQILL LR
Sbjct: 85 TIPLVRQQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFEVLVMTPQILLQSLRH 143
Query: 137 SYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ K+N I +LILDECHHA+ +H YA IM EFY+ PR+FGMTASPI K
Sbjct: 144 CFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYN---SNSVEKFPRVFGMTASPIIGK 200
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-LYTHL 253
S++ +Y + I+ LE L+++KV + +E + S ++ + Y Y + H+ L T
Sbjct: 201 GGSNKLNYTKCINSLEELLHAKVCSVDNEELES---VVASPDMEVYFYGPVNHSNLTTIC 257
Query: 254 ADELAMIELKHTRSLEN--LDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
EL ++L+ R L D ++Q +L K + +++ +++CL ELG + AL+AA T
Sbjct: 258 IKELDSLKLQSERMLRASLCDFKDSQKKL--KSLWRLHENIIFCLQELGSFGALQAARTF 315
Query: 312 SCYESDFFAWEQLDGFGET--IIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT 369
++ D ++D G T + + A+ L G+ D K L+ +
Sbjct: 316 LSFDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEK--LEEPFFS 373
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT--WKTKYIAGNNS 427
K LI L Y E+++CI+FV+R+ A + ++L L C WK +++ G +S
Sbjct: 374 NKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNL---KCLEFWKCEFLVGCHS 430
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
G + SR K + IV+ F G VN++VATS+ EEGLD+Q+C LV+ FD TV SFIQSRG
Sbjct: 431 GSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 490
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYG---ED 544
RARM S Y+++++ + + + L Y+A + M +E+ S S N M+ E+
Sbjct: 491 RARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTS-------NDMFDCLEEN 543
Query: 545 FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMGI-CTLYLPNNCPI 602
Y V++TG + + SVSL++ YC LP D +F P+P F +I+ GI C L LP N
Sbjct: 544 IYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAF 603
Query: 603 QTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE-- 658
+ Q + K+ ACL+AC KLH++GALTD LLP K+ N N
Sbjct: 604 RQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVED 663
Query: 659 -------HPIYFPPELVNQSPQDTKIT-------YHCYLIELKQHFNYDISARNIVLAMR 704
H + P L P K+ Y+ I + + Y + ++ +
Sbjct: 664 DSLREELHEMLIPAVL---KPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLP 720
Query: 705 TELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDK 763
E E+ + DL + RGR+ +KHLG+I +++L +FQ ++++D +
Sbjct: 721 VEAET----LQVDLHLARGRIVKAGIKHLGKIAFEKEKMMLAHKFQEMCLKILLDRSEFT 776
Query: 764 LNEILDGFELRDNLEID---YLLLPSTGQ------LIDWKTV----ATVLFPRDNGSKHN 810
+ G ++ LEI+ YLLLP + +IDW V ++ +F +
Sbjct: 777 SPHVKLGNDV--TLEINSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVH 834
Query: 811 MNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV 870
+ S+ + R++ G + S+V +PHN + + G+L +NA ++ ++G+
Sbjct: 835 ASYSSNESLRLL---DGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA---WSEHSGA- 887
Query: 871 TTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL----SKCRQQKQKEPSKISFELPPE 926
TY +H++ER+ I+L +PLL ++IF+++N L + + + +E + ELPPE
Sbjct: 888 -TYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVELPPE 946
Query: 927 LCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAIT 986
LC + + S S + +PS+M+RL++LL+A+ LK+++L + I +LEA+T
Sbjct: 947 LCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALT 1006
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
T+KC E LE E LGD+FLKY + F TY+ EG L+ ++ +++N+ L +L
Sbjct: 1007 TEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIR 1066
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSG------------SYELNDDSLFNGRKIYVTGRKKV 1094
+KL +IR + F+P + PG +++ D+ N +
Sbjct: 1067 KKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIHPDNRENCNLRCTRSHHWL 1126
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-----V 1149
K +ADVVE+LIGAFL GG FL IGI VDF N R + L
Sbjct: 1127 HRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYT 1186
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
++ LE L+ Y F+ LL++A H S+ CYQRLEFLGDAVL+Y+IT YLY+ Y
Sbjct: 1187 DIAGLEELIGYKFKHKGLLLQAFVHPSFS-QHSGGCYQRLEFLGDAVLEYVITSYLYSTY 1245
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P + PG +TD+RS +V ND A ++V+ +HKH++ S+ L I+ + + KLS
Sbjct: 1246 PDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAIS-KFEMYVKLSNSEK 1304
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
E + PKALGDI+ES GA+ +DSG N V++ + LL+P++T M +P+REL
Sbjct: 1305 DLLEE-PACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMREL 1363
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E CQ + F + P + G+ V VEV ++ T + + K A+K A +E L L
Sbjct: 1364 RELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKL 1423
Query: 1390 R 1390
+
Sbjct: 1424 K 1424
>gi|356571230|ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 756
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/759 (49%), Positives = 505/759 (66%), Gaps = 31/759 (4%)
Query: 653 EPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEI- 711
E + +P Y P ELV+ S + +TYHCYL+EL+QH+ Y +S +IVLA+R+EL+SEI
Sbjct: 2 EGFGNAYPSYVPSELVSCSSKGRNVTYHCYLMELEQHYEYQVSVNDIVLAIRSELDSEIV 61
Query: 712 ---KKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEIL 768
+FD V+RG+L VNL+HL IQL P +V CRRFQ TLFR++++ ++ KL +
Sbjct: 62 DTLSGTSFD--VKRGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVS 119
Query: 769 DGFELRDNLEIDYLLLPST-------GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARI 821
D F L DN EID+LLLP+T +IDWK V +V F ++ C +A
Sbjct: 120 DDFSLGDNPEIDFLLLPATVKHQRPSNSIIDWKPVLSVPFSSES------TCDCKDHACN 173
Query: 822 VHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLG--HLNANSLFTRNNGSVTTYKKHYEE 879
V ++ +C+CK+ N +V TPHNG IY I G LN NS + +TTYK+H+++
Sbjct: 174 VRIRNDSVCSCKLENCVVYTPHNGSIYIIYTTDGTKKLNGNSTLNQGLKGITTYKEHFKK 233
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLST 939
R+GI+L F+ + LL+GR +F V+NYL K RQ+ +K + S +LPPE+C +IM+PIS+ T
Sbjct: 234 RHGIELGFEHQSLLHGRNLFKVENYLLKTRQKTEKGKNMSSVDLPPEVCSVIMSPISIGT 293
Query: 940 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESL 999
YSF+F+PSIMH L+ LL+A NLK MLLDH N IP KVL+AIT K C+E + + L
Sbjct: 294 IYSFSFIPSIMHWLEGLLVAFNLKRMLLDHFTPN-DIPISKVLQAITAKGCEEAYDYDYL 352
Query: 1000 ETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD 1059
ETLGDS+LKY SQQLFKT QN+ EG LS K++ IISN L K GC + LPGFIR + FD
Sbjct: 353 ETLGDSYLKYIVSQQLFKTNQNDREGALSDKRKNIISNDVLFKYGCTRPLPGFIRKDKFD 412
Query: 1060 PKMWIIPGDNSGSYELNDDSLFNGR-KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENV 1118
PK W +PGD S S L L + R ++YV +++ +ADVVEALIGAF+ST E
Sbjct: 413 PKQWDVPGDKSNSILLLKQKLDSSRTRVYVRKTREIDLGIIADVVEALIGAFISTEDEKA 472
Query: 1119 GLIFLDRIGIKVDFVNVPYQRQFQVH---AERLVNVRHLESLLNYSFRDPSLLVEALTHG 1175
L F++ IGI VD +PY+ + + E LV + L+S LNYSF+DP LLVEALTH
Sbjct: 473 ALSFINWIGINVDTNIMPYENERHISIIAPEELVKAKLLKSRLNYSFKDPYLLVEALTHS 532
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LSPGYLTDMRSASVNNDCYALS 1233
S PEI CY+RLEFLGDAVLDY+IT++ Y +Y S + T+MRS SVNN+CYALS
Sbjct: 533 SGKRPEIRTCYERLEFLGDAVLDYVITMHFYKEYSNDKFSAEFFTNMRSISVNNECYALS 592
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAI 1293
++K L +HIL S + I T++ + LSL STFGWE T F + L D+IES+AGAI
Sbjct: 593 AIKAKLDEHILCDS-VVKNNIAQTMEGVKNLSLESTFGWELETYFCQVLADVIESIAGAI 651
Query: 1294 FVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAA 1353
FVDSG +EVVFQSI+PLLEP++TPET R HP+ EL E CQK + MK R++G+ +
Sbjct: 652 FVDSGYKKEVVFQSIKPLLEPLVTPETARRHPISELHELCQKKGYKMKVYPPVRVNGETS 711
Query: 1354 VTVEVQANGRLFEHT--FLDADKKTAKKVACKEVLKSLR 1390
VT+EV+ NG +++ ++ TA+K+A K+VLK ++
Sbjct: 712 VTIEVKTNGITYKNNPPAKASNNDTARKLAAKDVLKQIK 750
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/1474 (33%), Positives = 768/1474 (52%), Gaps = 134/1474 (9%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
+T D AR YQL+ + A+++N IV+L TG GKT IA++L+ +L+RKPS
Sbjct: 18 STRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSRE 77
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
V +FL P + LV QQA I TD KV Y+G+ G + D W+ +M + EVLVMTPQI
Sbjct: 78 VCIFLAPTIPLVRQQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFEVLVMTPQI 136
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
LL LR + K+N I +LILDECHHA+ +H YA IM EFY+ PR+FGMT
Sbjct: 137 LLQSLRHCFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYN---SNSVEKFPRVFGMT 193
Query: 188 ASPIKSKV--------------------------SSSEQDYWQKIHDLETLMNSKVYTCA 221
ASPI K S++ +Y + I+ LE L+++KV +
Sbjct: 194 ASPIIGKGVMPSHSFTEKGGRSPCQPLIFFLPKGGSNKLNYTKCINSLEELLHAKVCSVD 253
Query: 222 SESVLSNFIPFSTAKFKFYKYDEIPHA-LYTHLADELAMIELKHTRSLEN--LDLNEAQA 278
+E + S ++ + Y Y + H+ L T EL ++L+ R L D ++Q
Sbjct: 254 NEELES---VVASPDMEVYFYGPVNHSNLTTICIKELDSLKLQSERMLRASLCDFKDSQK 310
Query: 279 ELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGET--IIKKFG 336
+L K + +++ +++CL ELG + AL+AA T ++ D ++D G T +
Sbjct: 311 KL--KSLWRLHENIIFCLQELGSFGALQAARTFLSFDGDKLDRREVDLNGSTSSFAHHYL 368
Query: 337 SDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVER 396
+ A+ L G+ D K L+ + K LI L Y E+++CI+FV+R
Sbjct: 369 NGATSILSRNKTDGSHAGSFDLEK--LEEPFFSNKFSVLINVLSRYGLQENMKCIVFVKR 426
Query: 397 VITAIVLQSLLSELLPRHCT--WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVA 454
+ A + ++L L C WK +++ G +SG + SR K + IV+ F G VN++VA
Sbjct: 427 ITVARAISNILQNL---KCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSSGEVNLLVA 483
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
TS+ EEGLD+Q+C LV+ FD TV SFIQSRGRARM S Y+++++ + + + L Y
Sbjct: 484 TSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLERENQSHEKLLNGY 543
Query: 515 LASGNKMRKEVLSHASLPCSPLNNHMYG---EDFYHVESTGTIATLSSSVSLIYFYCSRL 571
+A + M +E+ S S N M+ E+ Y V++TG + + SVSL++ YC L
Sbjct: 544 IAGESIMNEEIDSRTS-------NDMFDCLEENIYQVDNTGASISTACSVSLLHCYCDNL 596
Query: 572 PSDGYFKPTPKF-HINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLH 627
P D +F P+P F +I+ GI C L LP N + Q + K+ ACL+AC KLH
Sbjct: 597 PRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLH 656
Query: 628 QIGALTDNLLPDIVVEKHDAQKRGNEPYNAE---------HPIYFPPELVNQSPQDTKIT 678
++GALTD LLP K+ N N H + P L P K+
Sbjct: 657 KLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVL---KPSGLKLD 713
Query: 679 -------YHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLK 730
Y+ I + + Y + ++ + E E+ + DL + RGR+ +K
Sbjct: 714 SLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAET----LQVDLHLARGRIVKAGIK 769
Query: 731 HLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID---YLLLPST 787
HLG+I +++L +FQ ++++D + + G ++ LEI+ YLLLP
Sbjct: 770 HLGKIAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLPIK 827
Query: 788 GQ------LIDWKTV----ATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNS 837
+ +IDW V ++ +F + + S+ + R++ G + S
Sbjct: 828 QKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLL---DGIFSKTDVVGS 884
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRR 897
+V +PHN + + G+L +NA ++ ++G+ TY +H++ER+ I+L +PLL ++
Sbjct: 885 VVFSPHNNIFFFVDGILDEINA---WSEHSGA--TYAEHFKERFRIELSHPEQPLLKAKQ 939
Query: 898 IFHVQNYL----SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRL 953
IF+++N L + + + +E + ELPPELC + + S S + +PS+M+RL
Sbjct: 940 IFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRL 999
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
++LL+A+ LK+++L + I +LEA+TT+KC E LE E LGD+FLKY +
Sbjct: 1000 ENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGR 1059
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG-- 1071
F TY+ EG L+ ++ +++N+ L +L +KL +IR + F+P + PG
Sbjct: 1060 HKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVV 1119
Query: 1072 ----------SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI 1121
+++ D+ N + K +ADVVE+LIGAFL GG
Sbjct: 1120 CNTDVEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFA 1179
Query: 1122 FLDRIGIKVDFVNVPYQRQFQVHAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGS 1176
FL IGI VDF N R + L ++ LE L+ Y F+ LL++A H S
Sbjct: 1180 FLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPS 1239
Query: 1177 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVK 1236
+ CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+
Sbjct: 1240 FS-QHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVE 1298
Query: 1237 HGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
+HKH++ S+ L I+ + + KLS E + PKALGDI+ES GA+ +D
Sbjct: 1299 KSIHKHLIKDSNHLTSAIS-KFEMYVKLSNSEKDLLEE-PACPKALGDIVESCIGAVLLD 1356
Query: 1297 SGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTV 1356
SG N V++ + LL+P++T M +P+REL E CQ + F + P + G+ V V
Sbjct: 1357 SGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKV 1416
Query: 1357 EVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
EV ++ T + + K A+K A +E L L+
Sbjct: 1417 EVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 1450
>gi|302819693|ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
gi|300140718|gb|EFJ07438.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
Length = 1719
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/1432 (34%), Positives = 755/1432 (52%), Gaps = 137/1432 (9%)
Query: 13 EVSADTLPFAR----NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS- 67
E D P R +YQ + + ALK+N IV L TG+GKT+IAIML++S+ L P
Sbjct: 343 EAGQDDDPARRKWRCSYQKDVFQRALKENIIVNLGTGTGKTMIAIMLIQSFEERLSMPQE 402
Query: 68 PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTP 127
+AVFL P V LV QQA AI+ T LKVG Y+GD GVD W W+ E+ H+VLVMTP
Sbjct: 403 KRIAVFLAPTVNLVIQQARAIESFTVLKVGDYYGDKGVDSWSVNQWQAEVDSHQVLVMTP 462
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
Q+ L+ L S KL ++VL++DECHHA H YA IM YH + + P+IFGMT
Sbjct: 463 QVFLNALGTSALKLEFVEVLVMDECHHAHKNHPYALIMKTHYH---VSCLKSKPKIFGMT 519
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
ASP+ K SS D +K+ LE+++++KVYT +S + + P T ++ +Y + P
Sbjct: 520 ASPVIQKGVSSSYDCNRKLTVLESILDAKVYTVEDKSEVEEYYPNPT---QYKEYYDRPK 576
Query: 248 ALYTHLADELAMIELK-HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
++ + EL +++ + ++ + N E Q + I+K + +++ ++ +CL +LG+ AL
Sbjct: 577 QRFSSIQTELEILKDRLNSEAACNCSDYELQNK-IKKSIDRLHLSINHCLVDLGLLPALL 635
Query: 307 AAETISCYESDFF--AWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN-L 363
A E + F W+ E +K + V+ +P ++ S +
Sbjct: 636 AVEILQNRNKSTFHSKWKPDVSLEEEEVKTSLKERFLQNVSSIPRFSQVSSRSYPTLEEM 695
Query: 364 DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYI 422
SG L+ K++ L++ L RG+ ++RCI+FVERVI A+ L L+S L H + Y+
Sbjct: 696 TSGTLSPKVLVLLDVLERLRGITNMRCIVFVERVIVAMALAKLISRLSFLSHL--RCDYM 753
Query: 423 AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
G ++ +Q E+++ F G +N+++ATS+ EEGLDVQ+C VI FD +T+ S
Sbjct: 754 TGVRD-TDARNPTQQQEVLDAFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSH 812
Query: 483 IQSRGRARMQ-NSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
+QSRGRAR + +S Y+ ++++G+ Q L N L + ++ ++
Sbjct: 813 VQSRGRARNRLSSTYVWLLETGN-VEQLNLFNQLCTSERVVED----------------- 854
Query: 542 GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCP 601
SVS I+ YC+RL D Y+ PKF K+ +CT+ P N P
Sbjct: 855 ----------------QDSVSFIHEYCARL-GDRYYNAKPKFSF-KDSFVCTVEFPPNAP 896
Query: 602 IQTVIAQGNIKTLKQ----AACLEACKKLHQIGAL-TDNLLPDIV-VEKHDAQKRGNEP- 654
+++V +G ++ +Q AACL+AC+KL+ +G + D L PD+ ++ D R NE
Sbjct: 897 LRSV--EGPLRRTEQLAKKAACLQACRKLYDMGEVRPDTLCPDVDDFDEEDQSMRKNESG 954
Query: 655 -----YNAEHPIYFPPELV-NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELE 708
++ P+ F V N+S + C++IE + Y N + ++
Sbjct: 955 KRKEIFSTAKPLIFEGSWVFNESGVQLQFYKICFVIEPPESRTYS----NFGFLVNCVID 1010
Query: 709 SEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEIL 768
+E+ L + + +G IQL NQV + +Q ++++ ++L
Sbjct: 1011 AEVTDSEVTLFSRNRVVNARVHRVGPIQLDANQVKAAKAYQ----ELLLNGAFNRLARCS 1066
Query: 769 DG-FELRDNLEIDYLLLP--STGQLIDWKTV-ATVLFPRDNGSKHNMNCSTMFNARIV-- 822
E+ N +LLLP IDW +V AT R S N + S+ + V
Sbjct: 1067 GSPQEILWNKSQAFLLLPVHDDNDSIDWTSVHATAGVYRTLCS--NFSPSSPMDGDGVGE 1124
Query: 823 HTKSGPLCTCK--IHNS-----LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKK 875
T + LCT +H+S +V T HNG+++C+TGVL + A SL + TY
Sbjct: 1125 KTHADVLCTANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKRG---FTYID 1181
Query: 876 HYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPI 935
+Y+++Y L +PLL + N + ++Q+ + ELPPELC + I
Sbjct: 1182 YYKDKYQRTLRLPEQPLLKAKPTHAFHNLPIRPKEQEGSRQEESFVELPPELC--LCLEI 1239
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S FVPS +HR S + A+ L++ L IP K+LEAIT+KKC E+F
Sbjct: 1240 KSGLIRSLYFVPSFLHRFTSTVCAIQLRSPLWPW------IPAAKILEAITSKKCHEEFS 1293
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
ESLE LGDSFLKY +Q+LF Y HEG LS ++ R NAAL +L + +IR
Sbjct: 1294 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRSRATCNAALHQLAKSSGIAEYIRD 1353
Query: 1056 ESFDPKMWIIPG----DNS------GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEA 1105
E F+P W PG D+S GSYE N+++ F+ G + ++ K +ADVVEA
Sbjct: 1354 EEFNPSNWTGPGMLTSDSSKCRHQQGSYE-NEENYFSS---CANGHRGIRRKALADVVEA 1409
Query: 1106 LIGAFLSTGGENVGLIFLDRIGIKVDFVN--VPYQRQFQVHAERL----VNVRHLESLLN 1159
LIGA+L+T G + + ++GI ++F + RQ + AE ++ LE L
Sbjct: 1410 LIGAYLATSGPPSAMELMKQLGIDIEFDIGLLASARQASLPAESFQHLQASLESLEHKLQ 1469
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ SLLVEA+TH S P CYQRLEFLGD VLD+L++ +L+ +PGL PG LTD
Sbjct: 1470 YKFQNRSLLVEAITHASQ--PNCLLCYQRLEFLGDGVLDFLVSRHLFETHPGLPPGTLTD 1527
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFP 1279
+RSA+VNN +A ++HGLH+H+ H S EL I V + ++ S F S P
Sbjct: 1528 LRSAAVNNKWFARLVLRHGLHQHLQHGSVELDCEIRKFVQNVKEKPDASCF---EDLSAP 1584
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFS 1339
K LGD++ES+ GAIFVD+ + E +++ + PLL P++TP T+RFHPVR L E C +
Sbjct: 1585 KVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPATLRFHPVRILMELCARK--G 1642
Query: 1340 MKKPVASRISGKAAVT-VEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
MK S +A T V V T + +K+AK A ++L SL+
Sbjct: 1643 MK---VSFFRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKMLASLQ 1691
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/1440 (33%), Positives = 751/1440 (52%), Gaps = 133/1440 (9%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQL+ + A+++N IV+L TG GKT IA++L+ +L+RKPS V +FL P
Sbjct: 25 DPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLAP 84
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+ LV QQA I TD KV Y+G+ G + D W+ +M + EVLVMTPQILL LR
Sbjct: 85 TIPLVRQQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFEVLVMTPQILLQSLRH 143
Query: 137 SYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ K+N I +LILDECHHA+ +H YA IM EFY+ PR+FGMTASPI K
Sbjct: 144 CFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYN---SNSVEKFPRVFGMTASPIIGK 200
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-LYTHL 253
S++ +Y + I+ LE L+++KV + +E + S ++ + Y Y + H+ L T
Sbjct: 201 GGSNKLNYTKCINSLEELLHAKVCSVDNEELES---VVASPDMEVYFYGPVNHSNLTTIC 257
Query: 254 ADELAMIELKHTRSLEN--LDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
EL ++L+ R L D ++Q +L K + +++ +++CL ELG + AL+AA T
Sbjct: 258 IKELDSLKLQSERMLRASLCDFKDSQKKL--KSLWRLHENIIFCLQELGSFGALQAARTF 315
Query: 312 SCYESDFFAWEQLDGFGET--IIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT 369
++ D ++D G T + + A+ L G+ D K L+ +
Sbjct: 316 LSFDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEK--LEEPFFS 373
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT--WKTKYIAGNNS 427
K LI L Y E+++CI+FV+R+ A + ++L L C WK +++ G +S
Sbjct: 374 NKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNL---KCLEFWKCEFLVGCHS 430
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
G + SR K + IV+ F G VN++VATS+ EEGLD+Q+C LV+ FD TV SFIQSRG
Sbjct: 431 GSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 490
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYG---ED 544
RARM S Y+++++ + + + L Y+A + M +E+ S S N M+ E+
Sbjct: 491 RARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTS-------NDMFDCLEEN 543
Query: 545 FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK-FHINKEMG-ICTLYLPNNCPI 602
Y V++TG + + SVSL++ YC LP D +F P+P F+I+ G IC L LP N
Sbjct: 544 IYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAF 603
Query: 603 QTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE-- 658
+ Q + K+ ACL+AC KLH++GALTD LLP K+ N N
Sbjct: 604 RQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVED 663
Query: 659 -------HPIYFPPELVNQSPQDTKIT-------YHCYLIELKQHFNYDISARNIVLAMR 704
H + P L P K+ Y+ I + + Y + ++ +
Sbjct: 664 DSLREELHEMLIPAVL---KPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLP 720
Query: 705 TELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKL 764
E E+ Q++L +FQ ++++D +
Sbjct: 721 VEAETL------------------------------QMMLAHKFQEMCLKILLDRSEFTS 750
Query: 765 NEILDGFELRDNLEID---YLLLPSTGQ------LIDWKTV----ATVLFPRDNGSKHNM 811
+ G ++ LEI+ YLLLP + +IDW V ++ +F +
Sbjct: 751 PHVKLGNDV--TLEINSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHA 808
Query: 812 NCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVT 871
+ S+ + R++ G + S+V +PHN + + G+L +NA ++ ++G+
Sbjct: 809 SYSSNESLRLL---DGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA---WSEHSGA-- 860
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY----LSKCRQQKQKEPSKISFELPPEL 927
TY +H++ER+ I+L +PLL ++IF+++N L + + + +E + ELPPEL
Sbjct: 861 TYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVELPPEL 920
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT 987
C + + S S + +PS+M+RL++LL+A+ LK+++L + I +LEA+TT
Sbjct: 921 CSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTT 980
Query: 988 KKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
+KC E LE E LGD+FLKY + F TY+ EG L+ ++ +++N+ L +L +
Sbjct: 981 EKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRK 1040
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSG------------SYELNDDSLFNGRKIYVTGRKKVK 1095
KL +IR + F+P + PG +++ D+ N +
Sbjct: 1041 KLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIHPDNRENCNLRCTRSHHWLH 1100
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-----VN 1150
K +ADVVE+LIGAFL GG FL IGI VDF N R + L +
Sbjct: 1101 RKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTD 1160
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ LE L+ Y F+ LL++A H S+ CYQRLEFLGDAVL+Y+IT YLY+ YP
Sbjct: 1161 IAGLEELIGYKFKHKGLLLQAFVHPSFS-QHSGGCYQRLEFLGDAVLEYVITSYLYSTYP 1219
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
+ PG +TD+RS +V ND A ++V+ +HKH++ S+ L I+ + + KLS
Sbjct: 1220 DIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAIS-KFEMYVKLSNSEKD 1278
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELT 1330
E + PKALGDI+ES GA+ +DSG N V++ + LL+P++T M +P+REL
Sbjct: 1279 LLEE-PACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELR 1337
Query: 1331 EYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
E CQ + F + P + G+ V VEV ++ T + + K A+K A +E L L+
Sbjct: 1338 ELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 1397
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/1440 (33%), Positives = 745/1440 (51%), Gaps = 91/1440 (6%)
Query: 4 VSMESDTTEEVSADTLP--FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY 61
+S+ D VS + P AR YQ++ + AL++N +V+L TGSGKT IA++L+ +
Sbjct: 28 LSINDDEHSSVSVEKDPRKIARKYQMDLCKKALEENVVVYLGTGSGKTHIAVLLIYEMGH 87
Query: 62 LLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
L++KP + VFL P V LV QQA+ I+ D KVG Y G W++EM ++E
Sbjct: 88 LIKKPQKSICVFLAPTVALVQQQAKVIEESIDFKVGTYCGK-SKHLKSHQDWEKEMEQYE 146
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSN 179
VLVMTPQILL L Y ++ I +LI DECH+A+ H YA IM FY +
Sbjct: 147 VLVMTPQILLHNLSHCYIRIEFIALLIFDECHYAQVESDHPYAEIMKIFY----KPDVVK 202
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF 239
PRIFGMTASPI K ++ E LETL+ SKVY+ + L F+ ++ K
Sbjct: 203 QPRIFGMTASPISGKGATVE--------GLETLLRSKVYSVEDKDELEQFV--ASPKVNV 252
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAEL--IRKKVSKINSTLLYCLS 297
Y+Y P + A + E+KH + ++ L + L +K + +++ L++ L
Sbjct: 253 YQYG--PGSSCHTKAYSQKLEEIKH-QCVKELHKKAVDSTLRNTKKMLKRLHGHLIFSLE 309
Query: 298 ELGVWLALKAAETI---SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS 354
LGV AL+A+ + +E +++ +++ ++ SQ + A+
Sbjct: 310 NLGVLGALQASCILLKGDHHERHQMVEAEVNASDDSLCDRY---LSQVDTVFTSGCAKDG 366
Query: 355 IGDDSKFN--LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+ D L ++K++ LI L + D++CI+FV R++TA L +L L
Sbjct: 367 MNPDLALMEVLKEPYFSKKLLRLIGILSNFGVQPDMKCIVFVNRIVTARSLSYILQHL-K 425
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
+WK ++ G +SG++ SRK N I+++FR G +N+++AT + EEGLD+Q+C LVI
Sbjct: 426 ILSSWKCGFLVGVHSGLKSMSRKNTNIILDKFRSGELNLLIATKVGEEGLDIQTCCLVIR 485
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
FD TV SFIQSRGRARM S+Y +V G+ +E++ S +M E+ S S
Sbjct: 486 FDLPETVASFIQSRGRARMPKSEYAFLVDRGNQRELDLIEHFTRSEAQMDDEISSRKSRT 545
Query: 533 CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-- 590
+ E+ Y V+ TG + + S+SL++ YCS+LP D YF P P+F+ ++
Sbjct: 546 MVA----DFQENIYKVDMTGATVSSALSISLLHHYCSKLPHDEYFCPKPQFYYFDDVDGT 601
Query: 591 ICTLYLPNNCPIQTV--IAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQ 648
IC L LP+N + ++ Q +I+ K+ ACL ACK LH++GALTD LLPD E D
Sbjct: 602 ICKLILPSNAAMHSIESAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQADEDKDLV 661
Query: 649 K--------RGNEPYNAEHPIYFPPELVNQ-SPQDTKITYHCYLIELKQHFNYDISARNI 699
G + H + P L + D + + Y I F D +
Sbjct: 662 PDCSDSECCEGEDAREELHEMIVPASLKEPWTETDNPVCLNSYYISFFP-FPNDRVYKKF 720
Query: 700 VLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
L ++ L E +++ DL + RGR + L G N++ L +FQ F++I+D
Sbjct: 721 GLFLKAPLPQEAERMKLDLNLARGRSVKTELIPSGTTSFENNEIQLAEKFQRMFFKIILD 780
Query: 759 HNLDKLNEI--LDGFELRDNLEIDYLLLPST--GQ---LIDWKTVATVLF-PRDNGSKHN 810
+ + ++E L+ + D+ YLLLP G +DW+ V L P S
Sbjct: 781 RS-EFISEFVSLEKKDFVDSGSKFYLLLPVNLFGHDKISVDWELVRRCLSSPVFGTSVCT 839
Query: 811 MNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV 870
N + F ++ +G + NSLV P + I+ V+ NA S++ + V
Sbjct: 840 SNNMSKFEEQL-QLANGSKSVHDVVNSLVYVPCKDAFFFISDVVKDKNAYSMYKDSKNHV 898
Query: 871 TTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRI 930
+HY + + + L + +PL+ +++F ++N L K + ++ + ELPPE+C++
Sbjct: 899 ----EHYYDTFSVHLLYPDQPLIKAKQLFCLENLLRKKGYSELRDKEEHFVELPPEICQL 954
Query: 931 IMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKC 990
+ S S + +PSIMHRL+SLL+A+ LK L + + VLEA+TT+ C
Sbjct: 955 KIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGRELAIDHVLEALTTENC 1014
Query: 991 QEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLP 1050
E F LE LE LGD+FLK+A + LF + EG L+ K+ ++N+ L + ++ L
Sbjct: 1015 HESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVAIKKNLQ 1074
Query: 1051 GFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS-------------K 1097
+IR +SF+P + + G N + N + +G +K+ K
Sbjct: 1075 AYIRDQSFEPDHFYVVG-RPCPVTCNKQTEKNIHGLCGSGTDGIKTEVRCSKYHHWLRKK 1133
Query: 1098 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN------VPYQRQFQVHAERLVNV 1151
T+AD+VEAL+GAF+ G + FL IGI DF + F A+ ++V
Sbjct: 1134 TIADIVEALVGAFVVDSGFKAAIAFLKWIGIHTDFKEPQLKSICSASKVFMPLADE-IDV 1192
Query: 1152 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
+E LL YSF LL++A H SY CYQRLEFLGDAVLDYLIT YLY+ YP
Sbjct: 1193 LGIERLLGYSFIHKGLLIQAFIHPSYN-RHGGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1251
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG 1271
L PG LTD+RS SVNN+ +A+ +V+ H HIL S +L + I V+ + ST G
Sbjct: 1252 LKPGQLTDLRSISVNNNTFAVVAVRQSFHSHILCDSSDLRESITRYVNFIGRPD--STRG 1309
Query: 1272 WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTE 1331
W PKALGD++ES GAI +D+G + +Q I L+P+++ ++ +P REL E
Sbjct: 1310 WVKSHLVPKALGDLVESCMGAILLDTGFDLNRAWQIILSFLKPVMSFTRLQLNPTRELYE 1369
Query: 1332 YCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
CQ +++K + S+ G V V + L+ +KK+A+++A + V SL+A
Sbjct: 1370 LCQSFGWNLKF-LPSKKDGNFLVEARVNGENVSAAASALNINKKSAQRMAAQIVCSSLKA 1428
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/1453 (32%), Positives = 754/1453 (51%), Gaps = 111/1453 (7%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
+T D AR YQLE + AL++N IV+L TG GKT IAI+L+ ++L+R
Sbjct: 41 STRTSEKDPRRIARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYELSHLIRSSQNG 100
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
+ VFL P V LV QQA+ I+ D KV Y G + +D W+ EM ++EV VMTP
Sbjct: 101 ICVFLAPTVALVQQQAKVIEDSLDFKVRVYCGGSKILNSHYD---WEREMEEYEVFVMTP 157
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLPRIFG 185
+I L L Y K++ +++LI DECHHA+ K H YA IM FY + D PRIFG
Sbjct: 158 EIFLRNLYHCYIKMDCVELLIFDECHHAQVKSDHSYAEIMRVFY----KANDPKRPRIFG 213
Query: 186 MTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEI 245
MTASP+ K + +Q+ + I+ LE L+++KVY+ + L F+ S+ Y Y +
Sbjct: 214 MTASPVVGKGACHQQNLSRSINSLEKLLDAKVYSVENREELHAFV--SSPLVNIYYYGPV 271
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNEAQAELI---RKKVSKINSTLLYCLSELGVW 302
+ + + +E + + L +++ E++ +K + +++ +L+CL LGVW
Sbjct: 272 ANGSSSSFMSYSSRLEDVKRKCIVALGQVKSEHEVLLATKKLLFRMHENILFCLESLGVW 331
Query: 303 LALKAAETI----SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD 358
AL+A + + + S+ + + +++ ++ + A++ SG + G
Sbjct: 332 GALQACKILLSGDNSERSELIEAAERNPKNDSLSDRYLNQAAEIFA----SGCKKDGGIS 387
Query: 359 SKFNLD---SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
N+D ++K++ LI L +R +++CIIFV R++ A L +L L
Sbjct: 388 DMLNVDILEDPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNL-NFLA 446
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
WK ++ G +S ++ SRK N I+ +FR G +N+++AT + EEGLD+Q+C LVI FD
Sbjct: 447 YWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDL 506
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP 535
TV SFIQSRGRARM S+Y +V SG+ + + N+M +E+ S +S
Sbjct: 507 PETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREIYSRSS--NET 564
Query: 536 LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICT 593
++H E Y V STG T S+SL++ YCS+LP D YF P P+F ++G +C
Sbjct: 565 FDSHE--ESIYRVASTGASITSGRSISLLHEYCSKLPHDDYFDPKPQFSYYDDLGGTVCH 622
Query: 594 LYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRG 651
+ LP+N PI +++ Q + K+ ACL+A ++LH++GAL+D LLP + Q+ G
Sbjct: 623 VNLPSNAPIPQIVSRSQSSKDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESG 682
Query: 652 NEPYNAE-----------HPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIV 700
+++ H + FP L + +CY I+ D + +
Sbjct: 683 LNSSDSDSSEDETSRRELHEMIFPAALKESWTGSGYLVLYCYHIKCTPD-PRDRNYKEFG 741
Query: 701 LAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDH 759
L ++ L E +++ +L + RGR + VNL G ++L+ ++ FQ +VI
Sbjct: 742 LFVKAPLPQEAERMGLELHLARGRSVMVNLIPSGVVELLEEEITQAESFQEMFLKVI--- 798
Query: 760 NLDKLNEILDGFELRDN----LEIDYLLLP-----STGQL-IDWKTV----ATVLFPRDN 805
LD+L + + LR+N + YLLLP + G L IDW + ++ +F D
Sbjct: 799 -LDRLEFVQEYIPLRNNASRSVSSSYLLLPMIFHDNEGSLFIDWNVIRRCLSSKIFQNDA 857
Query: 806 G--SKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLF 863
K + T H +S I NSLV P+ G+ + +T + N +S +
Sbjct: 858 CLIVKGTASSDTHLMLYDGHRRSS-----DIENSLVYVPYKGEFFFVTNIERGKNGHSQY 912
Query: 864 TRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS--- 920
N +++ +H + ++GI L + +PLL + +F + N+L R+++ E +
Sbjct: 913 --KNSGFSSHFEHLKTKFGIHLNYPEQPLLRAKPLFLLHNWLHN-RKREDSEARHLEEYF 969
Query: 921 FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK 980
ELPPE+C++ + S S + +PSIMHRL++LL+A+ LK L + +
Sbjct: 970 IELPPEVCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKCRLAAAFPAGAEVTANR 1029
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+LEA+TT+KCQE LE LE LGDSFLK+A ++ LF T+ EG L+ ++ ++ N L
Sbjct: 1030 ILEALTTEKCQERISLERLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNL 1089
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPG---------DNSGSYELNDDSLFNGRKIYV--- 1088
KL + L +IR + F+P + + G + S +DD+ N +
Sbjct: 1090 LKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETSKDIHSHDDATNNAKANETKCS 1149
Query: 1089 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----VNVPYQRQFQV 1143
G ++ KT++DVVEAL+GAFL G + FL IGI+V+F + V
Sbjct: 1150 KGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASLVTDALMASNAYV 1209
Query: 1144 HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
+++ L++ L + F LL++AL H SY CYQRLEFLGDAVLDYLIT
Sbjct: 1210 LLADSIDISALQNSLGHRFLHKGLLLQALVHPSYH-KHGGGCYQRLEFLGDAVLDYLITS 1268
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN-----ITV 1258
YLY+ YP L PG LTD+RS V N+ +A +V +K +L S L I I
Sbjct: 1269 YLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSTSLLSDIKSYVHFIKA 1328
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
FE+ SL PKALGD++ES GA+ VD+G + V++ + ++P+++
Sbjct: 1329 PPFERDSLEQ-------PRCPKALGDLVESSVGAVLVDTGFDMNCVWKIMLSFIDPIMSF 1381
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
+ P+R++TE+CQ + +K +S++ G +V EV+ + + KK A
Sbjct: 1382 SGFQLSPIRDITEFCQNCGWKLKFN-SSKMEGYYSVKAEVKGGNFHATASAANRRKKDAA 1440
Query: 1379 KVACKEVLKSLRA 1391
K+A +L L+A
Sbjct: 1441 KIAANLILTKLKA 1453
>gi|359475987|ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/1439 (33%), Positives = 732/1439 (50%), Gaps = 149/1439 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVLV 81
R+YQ + E A ++NTI L+TG+GKT+IA+ML+R ++ +FL P V LV
Sbjct: 47 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLV 106
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ + IK T +V +Y+G GVD W +W++E+S+H+VLVMTPQILLD LR ++ L
Sbjct: 107 NQQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSL 166
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+ ++I+DECH A G H Y IM EFYH+ ++ P+IFGMTASP+ K SS D
Sbjct: 167 ETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDK-----PKIFGMTASPVIRKGVSSSMD 221
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
+I +LE++++ ++YT + L FIP + +FY + H D A ++
Sbjct: 222 CENQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQF------HNLDLKAKLK 275
Query: 262 LKHTRSLENLDLN------------EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
++ +NL LN + + + +RK++S ++ +LYCL +LG+ A +A +
Sbjct: 276 SSWSK-FDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVK 334
Query: 310 TISCYESDFFAWEQLDGFGETI--IKKFGSDASQALVTYVPSGAEWSIGDDSKF--NLDS 365
C E+ A E+ + + ++ K F + + Y+P G + +S +D
Sbjct: 335 V--CIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDK 392
Query: 366 GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL-PRHCTWKTKYIAG 424
G +T K+ L++ + + C+IFVER+ITA V++ + +++ H T Y+ G
Sbjct: 393 GYITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFT--VSYLTG 450
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
+NS + + K Q E +E FR G VN++ AT ++EEG+ V +C+ VI FD +TV S++Q
Sbjct: 451 SNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQ 510
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE- 543
SRGRAR +S +++M++ G++ + +L + + S M + ++ L + E
Sbjct: 511 SRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSM-TDTATNRDPDGYTLKAYTIEEM 569
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCP 601
D Y V+STG T SSVSLI+ YC +LP D YF P P FH G+ C L LP N
Sbjct: 570 DSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAA 629
Query: 602 IQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLP--------DIVVE-KHDAQKR 650
QT+I GN + KQ CLEACKKLHQ+GAL D+LLP DI+V+ K A
Sbjct: 630 FQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGA 689
Query: 651 GNEPYNAEHPI--------YFPPELVNQSPQDTKITYHCYLI-ELKQHFNYDISARNIVL 701
G H + ++ Q KI + C ++ EL F VL
Sbjct: 690 GTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGF---------VL 740
Query: 702 AMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNL 761
+ ++L+ ++ + +L + + ++ G++ L QV+ RF F +
Sbjct: 741 LIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLF 800
Query: 762 --DKLNEILDGFELRDNLEI------DYLLLP--------STGQLIDW------KTVATV 799
K + + F L + YLLLP I+W +V
Sbjct: 801 IGSKSSGVRREFLLNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEF 860
Query: 800 LFPRDNGSKHNMN--------CSTMF------NARIVHTKSGPLCTCKIHNSLVCTPHNG 845
L R S NMN CST + VH + + + N +V H G
Sbjct: 861 LEKRSQLSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTG 920
Query: 846 QIYCITGVLGHLNANSLFTR----NNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHV 901
+IY I V+ +A S F N+ + TT+ +++ +YGI L + +PLL ++ +
Sbjct: 921 RIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNA 980
Query: 902 QNYL-----SKCRQQKQK---EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRL 953
N L Q QK E ++ +PPEL I PI++ S +PS++HRL
Sbjct: 981 HNLLVNFNDEDALQTGQKMLNEKAQTHVHMPPELLVSIEVPITV--LKSSYLLPSLIHRL 1038
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
+SL+LA L+ + I + +LEAITT +C E F +E LE LGDS LKYA S
Sbjct: 1039 ESLMLASQLREEIA--FTTGSQISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSC 1096
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS--- 1070
LF Y HEG LS ++ ++ N+ L KLG ++ L G+IR +FDP+ W+ PG S
Sbjct: 1097 HLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRP 1156
Query: 1071 ---------------GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG 1115
G ++ D + G+ G + + SKT+AD VEALIGA+ GG
Sbjct: 1157 VPCSCGVDALEVPLDGKFQTEDTKIVVGKSCD-RGHRWMGSKTIADCVEALIGAYYVGGG 1215
Query: 1116 ENVGLIFLDRIGIKVDFV-----NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVE 1170
N L + GI V+ + + + + LES + Y F LL+E
Sbjct: 1216 LNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVKGLLLE 1275
Query: 1171 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY 1230
A+TH + + CYQRLEFLGD+VLD LIT +LY + + PG LTD+RSASVNN+ +
Sbjct: 1276 AITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESF 1335
Query: 1231 ALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV--TSFPKALGDIIES 1288
A +V+ L +H+ H S L +I + K GS + T PKALGD++ES
Sbjct: 1336 AQVAVRRNLQQHLQHCSGLLLGQIK----EYAKYLSGSDDVPNPLQSTKGPKALGDLVES 1391
Query: 1289 LAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASR 1347
+AGAI +D+ N V++ +PLL P++TP+ + P+REL E C + +K+ ++
Sbjct: 1392 IAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNK 1450
>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
Length = 1445
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/1454 (33%), Positives = 744/1454 (51%), Gaps = 121/1454 (8%)
Query: 9 DTTEEVSADTLP---FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
D E D LP R YQ+EALE A K++ IV+LETG GKT +A+MLL+ A L+RK
Sbjct: 15 DQEGEDEFDALPNVLTPRGYQIEALERAKKEDIIVYLETGCGKTHVAVMLLQHIADLIRK 74
Query: 66 PSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM 125
PS +AVFL P V LV QQA +K +T+ KVG+Y+G++ + W+ W+ E+ E+ VM
Sbjct: 75 PSTRIAVFLCPSVPLVQQQARVVKRYTNFKVGEYYGEVNNNAWNSKAWEAELENTEIFVM 134
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN---LPR 182
TP ILL L + +++ I++LI DECHHA H YA IM EFYH G + LPR
Sbjct: 135 TPAILLHNLHHCFMRMDCIELLIFDECHHAHSHHPYANIMQEFYH-----GKEDLYRLPR 189
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
I GMTASPI KV+ KI +E ++++K++T S L +P K ++Y+
Sbjct: 190 ILGMTASPINGKVNCQGDSIRTKIDKIERMLHAKLHTVKESSELDLVVPRPHHKSEYYES 249
Query: 243 DEIPHALYTHLADELAMIE------LKHTRSLENLDLNEAQAELIRKK---VSKINSTLL 293
+ P+ + L ++ L T E L E + + +K+ V K+ ++L
Sbjct: 250 AQTPNPVTLKFCQLLFDLQKECIGTLLGTSGCEGELLGELCSGVEKKRVKNVKKLCNSLG 309
Query: 294 YCLSELGVWLALKAAET-ISCYESDFFAWEQLDGFGE----------TIIKKFGSDASQA 342
YC +ELG A +A + + Y+SD +LD E + F S +A
Sbjct: 310 YCATELGPRCAYEAVKILLHKYDSD--CDPELDSNSEGKKDMLRKILNALNSFLSKEVEA 367
Query: 343 LVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIV 402
VP GA N+ + L+ K+ LI L R ++RCIIFVER IT V
Sbjct: 368 TSCAVPDGAA---------NIQN--LSSKVQLLINVLERCRDTNEMRCIIFVERKITTRV 416
Query: 403 LQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
L SLLS + ++ + +AG NSG + K Q +VE FR G VNV+V+T++ EEGL
Sbjct: 417 LASLLSSIEVLSPAFRFQSLAGKNSGSNDMNHKHQQNVVESFRNGEVNVLVSTNVAEEGL 476
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMR 522
D+Q+C+LVI FD T CS IQSRGRAR S + + + G++ RLE +L + M+
Sbjct: 477 DIQNCHLVIRFDLPNTPCSLIQSRGRARCLKSTIIYLTERGNNEQSQRLEQFLLTEESMK 536
Query: 523 KEVLS---HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
+EVLS +A +P + + + + VESTG + SVSL++ YC+RL D ++ P
Sbjct: 537 EEVLSRIKNAEDVGAPETSTI---ETFRVESTGATMSTLCSVSLLHQYCARLAHDSFYTP 593
Query: 580 TPKFHINKE-MGI-CTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDN 635
TP+F +++ G+ CT+ LP + +Q+V + + K+ ACL AC++L+ GALT+
Sbjct: 594 TPQFSYSEDGSGVKCTIKLPTDALVQSVEGRPVSSQADAKRVACLIACERLYDAGALTEL 653
Query: 636 LL---------PDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIEL 686
LL D + + ++ G +P + I + H Y I
Sbjct: 654 LLLKSKENAYSLDAIAPESNSTT-GRDPLPSRSIIVPDAFSGTWGSGLNSVELHAYAISF 712
Query: 687 KQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLK--HLGRIQLIPNQVLL 744
N D + N L + ++ E + +L++ RL VN K G I P+Q
Sbjct: 713 VATPN-DRAYVNFGLFLEADMGPEAGSIEVELQLSNRRL-VNAKCSPCGTILFEPDQSTN 770
Query: 745 CRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQL------IDWKTVAT 798
+ + +F ++D N L G + L YLLLP + IDW +
Sbjct: 771 AKSSR-AIFSSVLDQKPPVPNIELSGEWNSNRL---YLLLPLKEKQDALPLSIDWDCIED 826
Query: 799 VLFPRDNGSKHNMNC-STMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQ--IYCITGVLG 855
++ G S + + ++ G + NSL+ T H G+ +YC ++
Sbjct: 827 LISDVMKGYNTLEEVPSEIPRSSLLRLIDGYFPVEHVTNSLIQTEHTGKRCLYCARELIP 886
Query: 856 HLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKC----RQQ 911
+N S +Y +Y +++ L F +P+L + + V N L++ R
Sbjct: 887 DMNGQSPMIMKVSKYNSYSDYYLKKHNRTLNFVEQPMLKAKPLIQVNNLLTQRTTSERPA 946
Query: 912 KQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 971
+++ ++ ELP ELC+I++ +S + + +PS MHRL+ LLLAV + L
Sbjct: 947 AEEQKTESLVELPLELCKIMVKGLSCALTNGISLLPSFMHRLEGLLLAVQFRKSLPSP-- 1004
Query: 972 QNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKK 1031
+ +P +LEAITT KCQE F LE LE LGD+FL+ + S++LF + EG LS ++
Sbjct: 1005 HSSPVPANLMLEAITTSKCQESFSLEGLELLGDAFLEVSVSERLFLLHNRLDEGELSKRR 1064
Query: 1032 ERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR 1091
+I N L +LG E+ + +IR F PK W PG ++ T
Sbjct: 1065 TNLICNKMLERLGRERGIMNYIRDTQFSPKEWATPG-----------------RVRETQC 1107
Query: 1092 K--KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQVHAE-- 1146
K ++ KT+ADV EALIGA GG + +G +V ++ + + +VH +
Sbjct: 1108 KLPPLQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGCEVGVSSSIREEARTRVHGQLE 1167
Query: 1147 --RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
V LE LLNY F++ LLVEALTH S CYQRL FLGDAVLD+LIT +
Sbjct: 1168 LLSEAKVSELEILLNYKFQNKGLLVEALTHASCRR-HSGDCYQRLGFLGDAVLDFLITKH 1226
Query: 1205 LYNKYPGL--SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV--DS 1260
Y L PG LTD+RSA+VNN+C+A +V+H LH ++LH S +L R++ V +
Sbjct: 1227 FYANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDKYVHGST 1286
Query: 1261 FEKLSLGSTFGWE---SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
+ +L F S +S + L D++ESLAGA+F+DSG + V+ + LL+P++T
Sbjct: 1287 TDVCALSEAFLLSKHLSCSSM-QVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPLVT 1345
Query: 1318 PETMRFHPVRELTEYCQKNHFSMKKPVASRIS-GKAAVTVEVQANGRLFEHTFLDADKKT 1376
P T+R P+REL E CQ F R + G +TV V+ D+K+
Sbjct: 1346 PATLRLEPIRELWELCQTEKFGEPNYKKKREAMGDFDMTVTVELKDETITGVGRKPDEKS 1405
Query: 1377 AKKVACKEVLKSLR 1390
A+KVA + L++L+
Sbjct: 1406 ARKVAAIQALETLK 1419
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/1448 (33%), Positives = 751/1448 (51%), Gaps = 98/1448 (6%)
Query: 1 MEPVSMESDTTEEVSA-----DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIML 55
+ +S+ D VS D AR YQ++ + AL++N +V+L TG GKT IA++L
Sbjct: 25 LSALSLSGDIDSPVSVQKPEKDPRKIARKYQMDLCKKALEENVVVYLGTGCGKTHIAVLL 84
Query: 56 LRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKE 115
+ L+RKP + VFL P V LV QQA+ I+ D KVG Y G W++
Sbjct: 85 IYEMGQLIRKPQKSICVFLAPTVALVQQQAKVIEDSIDFKVGTYCGK-SKHLKSHEDWEK 143
Query: 116 EMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLL 173
EM ++EVLVMTPQILL L Y ++ I +LI DECH+A+ H YA IM FY
Sbjct: 144 EMEQYEVLVMTPQILLHNLSHCYIRIEFIALLIFDECHYAQVESDHPYAEIMKIFY---- 199
Query: 174 ETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFS 233
+ LPRIFGMTASPI K ++ E LETL+ SKVY+ + L F+ +
Sbjct: 200 KPDVVKLPRIFGMTASPISGKGATVE--------GLETLLRSKVYSVEDKDELEQFV--A 249
Query: 234 TAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
+ K Y Y L + +L I+ + L ++ + +K + +++ L+
Sbjct: 250 SPKVNVYYYGPGTACLTKAYSQKLEEIKHQCVMVLHKKAVDHSTLRNTKKMLKRLHGHLI 309
Query: 294 YCLSELGVWLALKAAETI---SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG 350
+ L LGV+ AL+A+ + YE ++ +++ ++ SQ +
Sbjct: 310 FSLENLGVFGALQASCILLKGDHYERHQMVEADVNASDDSLCDRY---LSQVATVFTSGC 366
Query: 351 AEWSIGDD-SKFN-LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
A+ + D ++ L ++K++ LI L + D++CIIFV R++TA L +L
Sbjct: 367 AKDGMNPDLTRVEVLKEPYFSKKLLRLIGILSNFGVQPDMKCIIFVNRIVTARSLSYMLQ 426
Query: 409 ELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
L +WK ++ G +SG++ SRK N I+ +FR G +N++VAT + EEGLD+Q+C
Sbjct: 427 HL-KVLSSWKCGFLVGVHSGLKSMSRKNTNIILNKFRSGELNLLVATKVGEEGLDIQTCC 485
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH 528
LVI FD TV SFIQSRGRARM S+Y +V S + + +E++ + +M E+ S
Sbjct: 486 LVIRFDLPETVASFIQSRGRARMPKSEYAFLVDSDNQRELNLIEHFSRNEARMNDEISSR 545
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
S C+ + + + E+ Y V+ TG + +SS+SL++ YCS+LP D +F P P+F +
Sbjct: 546 KS--CTAVID--FQENIYKVDMTGATISSASSISLLHHYCSKLPRDEFFCPKPQFFYFDD 601
Query: 589 MG--ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEK 644
+ IC L LP+N P+ +++ Q +I+ K+ ACL ACK LH++GALTD LLPD E
Sbjct: 602 IDGTICKLVLPSNAPMHQIVSAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQADED 661
Query: 645 --H---DAQKRGNEPYNAEHPIYFPPELVNQSPQDTK--ITYHCYLIELKQHFNYDISAR 697
H + + +E E P +S +T+ + + Y I D +
Sbjct: 662 LIHVFLTQKAQMDEDAREELHEMIVPAAFKESWTETESPVCLNSYYINFSP-CPIDRVYK 720
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVI 756
L ++ L E +++ DL + RGR + L G N+V L +FQ ++I
Sbjct: 721 KFGLFLKAPLPQEAERMKLDLNLARGRSVETELIPSGATNFENNEVQLAEKFQRMFLKII 780
Query: 757 MDHNLDKLNEI--LDGFELRDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKH 809
+D + + ++E L+ + D+ YLLLP +DW+ V L G+K
Sbjct: 781 LDRS-EXISEFVSLEKEDYVDSASKSYLLLPVNLCGHNKISVDWELVRRCLSSPIFGTKV 839
Query: 810 NMNCSTM--FNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNN 867
S + F+ ++ +G + NSLV P + I+ V+ NA S++ +
Sbjct: 840 YAGNSEISKFDEQL-QLANGSKSVHDVANSLVYVPCKETFFFISDVVKESNAYSIYKDSK 898
Query: 868 GSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPEL 927
V +HY + +GI+L + +PL+ +++F + N L K + ++ + ELP E+
Sbjct: 899 NHV----EHYYDTFGIRLSYPEQPLIKAKQLFCLDNLLRKKGYSELRDKEEHFVELPAEI 954
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT 987
C++ + S S + +PSIMHRL+SLL+A+ LK L + + VLEA+TT
Sbjct: 955 CQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVTIDHVLEALTT 1014
Query: 988 KKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
+KC E F LE LE LGD+FLK+A + +F TY EG L+ ++ I++N+ L +
Sbjct: 1015 EKCNEPFSLERLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTRRRSNIVNNSYLYTIAVRN 1074
Query: 1048 KLPGFIRTESFDPKMWIIPG---------DNSGSYELNDDSLFNGRKIYVTGRK---KVK 1095
L FIR +SFDP + G S S+ +G K V K ++
Sbjct: 1075 NLQAFIRDQSFDPYHFYAVGRPCPVICNKQTEKSIHGQCGSVTDGAKTEVRCSKCHQWLR 1134
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN------VPYQRQFQVHAERLV 1149
KT+AD+VEAL+GAF+ G + FL IGI DF + F A+ +
Sbjct: 1135 KKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIYTDFEESQVKSICAASKVFMPLADE-I 1193
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+++ +E+LL Y+F LL++A H SY CYQRLEFLGDAVLDYLIT YLY+ Y
Sbjct: 1194 DIQAIENLLGYTFVHKGLLIQAFIHPSYN-NHGGGCYQRLEFLGDAVLDYLITSYLYSVY 1252
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV------DSFEK 1263
P L PG LTD+RS SVNN +A+ +V H HIL S L + I V DS ++
Sbjct: 1253 PKLKPGQLTDLRSVSVNNTTFAVVAVHQSFHSHILCDSSGLRESITRYVNFIGRPDSMKR 1312
Query: 1264 LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
LS S PKALGD++ES GAI +D+G + ++ + L+P+++ ++
Sbjct: 1313 LS--------EEPSCPKALGDLVESCMGAILLDTGFDLNXAWRIMLSFLKPVMSFTRLQL 1364
Query: 1324 HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACK 1383
+P REL E CQ + +K +AS+ K V +V + L+ +KK A ++A +
Sbjct: 1365 NPKRELHELCQSYGWHLKF-LASKKDSKYLVEAKVNGENVSEAASALNINKKAAARMAAQ 1423
Query: 1384 EVLKSLRA 1391
+V SL+A
Sbjct: 1424 QVHSSLKA 1431
>gi|296081735|emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/1449 (32%), Positives = 733/1449 (50%), Gaps = 159/1449 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVLV 81
R+YQ + E A ++NTI L+TG+GKT+IA+ML+R ++ +FL P V LV
Sbjct: 47 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLV 106
Query: 82 PQ--------QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
Q Q + IK T +V +Y+G GVD W +W++E+S+H+VLVMTPQILLD
Sbjct: 107 NQACFFFIFSQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDA 166
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
LR ++ L + ++I+DECH A G H Y IM EFYH+ ++ P+IFGMTASP+
Sbjct: 167 LRKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDK-----PKIFGMTASPVIR 221
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
K SS D +I +LE++++ ++YT + L FIP + +FY + H
Sbjct: 222 KGVSSSMDCENQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQF------HN 275
Query: 254 ADELAMIELKHTRSLENLDLN------------EAQAELIRKKVSKINSTLLYCLSELGV 301
D A ++ ++ +NL LN + + + +RK++S ++ +LYCL +LG+
Sbjct: 276 LDLKAKLKSSWSK-FDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGL 334
Query: 302 WLALKAAETISCYESDFFAWEQLDGFGETI--IKKFGSDASQALVTYVPSGAEWSIGDDS 359
A +A + C E+ A E+ + + ++ K F + + Y+P G + +S
Sbjct: 335 ICAYEAVKV--CIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSES 392
Query: 360 KF--NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL-PRHCT 416
+D G +T K+ L++ + + C+IFVER+ITA V++ + +++ H T
Sbjct: 393 DILKAVDKGYITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFT 452
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
Y+ G+NS + + K Q E +E FR G VN++ AT ++EEG+ V +C+ VI FD
Sbjct: 453 --VSYLTGSNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLP 510
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPL 536
+TV S++QSRGRAR +S +++M++ G++ + +L + + S M + ++ L
Sbjct: 511 KTVRSYVQSRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSM-TDTATNRDPDGYTL 569
Query: 537 NNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CT 593
+ E D Y V+STG T SSVSLI+ YC +LP D YF P P FH G+ C
Sbjct: 570 KAYTIEEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECK 629
Query: 594 LYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLP--------DIVVE 643
L LP N QT+I GN + KQ CLEACKKLHQ+GAL D+LLP DI+V+
Sbjct: 630 LTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVK 689
Query: 644 -KHDAQKRGNEPYNAEHPI--------YFPPELVNQSPQDTKITYHCYLI-ELKQHFNYD 693
K A G H + ++ Q KI + C ++ EL F
Sbjct: 690 SKGSAAGAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGF--- 746
Query: 694 ISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLF 753
VL + ++L+ ++ + +L + + ++ G++ L QV+ RF F
Sbjct: 747 ------VLLIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFF 800
Query: 754 RVIMDHNL--DKLNEILDGFELRDNLEI------DYLLLP--------STGQLIDW---- 793
+ K + + F L + YLLLP I+W
Sbjct: 801 NSLFGRLFIGSKSSGVRREFLLNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGIN 860
Query: 794 --KTVATVLFPRDNGSKHNMN--------CSTMF------NARIVHTKSGPLCTCKIHNS 837
+V L R S NMN CST + VH + + + N
Sbjct: 861 SCASVVEFLEKRSQLSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNM 920
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTR----NNGSVTTYKKHYEERYGIQLCFDREPLL 893
+V H G+IY I V+ +A S F N+ + TT+ +++ +YGI L + +PLL
Sbjct: 921 VVLAIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLL 980
Query: 894 NGRRIFHVQNYL-------SKCRQQKQK---EPSKISFELPPELCRIIMAPISLSTFYSF 943
++ + N L + Q QK E ++ +PPEL I PI++ S
Sbjct: 981 LLKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELLVSIEVPITV--LKSS 1038
Query: 944 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLG 1003
+PS++HRL+SL+LA L+ + I + +LEAITT +C E F +E LE LG
Sbjct: 1039 YLLPSLIHRLESLMLASQLREEIA--FTTGSQISSSLILEAITTLRCSESFSMERLELLG 1096
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DS LKYA S LF Y HEG LS ++ ++ N+ L KLG ++ L G+IR +FDP+ W
Sbjct: 1097 DSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRW 1156
Query: 1064 IIPGDNS------------------GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEA 1105
+ PG S G ++ D + G+ G + + SKT+AD VEA
Sbjct: 1157 VAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCD-RGHRWMGSKTIADCVEA 1215
Query: 1106 LIGAFLSTGGENVGLIFLDRIGIKVDFV-----NVPYQRQFQVHAERLVNVRHLESLLNY 1160
LIGA+ GG N L + GI V+ + + + + LES + Y
Sbjct: 1216 LIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGY 1275
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F LL+EA+TH + + CYQRLEFLGD+VLD LIT +LY + + PG LTD+
Sbjct: 1276 EFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDL 1335
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV--TSF 1278
RSASVNN+ +A +V+ L +H+ H S L +I + K GS + T
Sbjct: 1336 RSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIK----EYAKYLSGSDDVPNPLQSTKG 1391
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PKALGD++ES+AGAI +D+ N V++ +PLL P++TP+ + P+REL E C +
Sbjct: 1392 PKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGY 1451
Query: 1339 SMKKPVASR 1347
+K+ ++
Sbjct: 1452 FIKEKCTNK 1460
>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1662
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1585 (32%), Positives = 781/1585 (49%), Gaps = 259/1585 (16%)
Query: 36 QNTIVFLETGSGKTLIAIMLLR-SYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDL 94
+NTI FLETG+GKTLIA++L++ Y L + +AVFLVPKV LV QQAE I+ T+
Sbjct: 2 KNTIAFLETGAGKTLIAVLLMKHKYQVLREQGRRMLAVFLVPKVPLVYQQAEVIRNGTNF 61
Query: 95 KVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHH 154
VG Y G+MG DFWD W+ E ++ VMT QILL+ LR S ++ I +LILDECHH
Sbjct: 62 VVGHYCGEMGQDFWDARRWQREFDTRDIFVMTAQILLNILRHSIVRMEAIHLLILDECHH 121
Query: 155 ARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMN 214
A KH Y+ +M+EFYH T P +FGMTASP+ K S+++D KI +LE+ ++
Sbjct: 122 AVKKHPYSLVMSEFYHV---TPKDKRPCVFGMTASPVNLKGVSNQEDCAIKIRNLESKLD 178
Query: 215 SKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE------------- 261
S V T L +P + Y + P L++ L +E+ ++E
Sbjct: 179 SIVCTIKDRKELEKHVPMPSEIMVLY---DKPALLFS-LREEIKLMESTVEEAANASVRR 234
Query: 262 -------LKHTRSLENLDLNEAQAELIRK----KVSKINSTLLYCLSELGVWLALKAAET 310
+ + E L L AE +S+ ++Y L ELG W A K + T
Sbjct: 235 SKWKFMGARDAGAKEELRLVYGVAERTESDGAASLSQKLRAIIYALDELGQWCAYKVSLT 294
Query: 311 -ISCYESDFFAWEQLD-GFGETIIKKF----------GSDASQALVTY------------ 346
++ +D QLD F E +KK G+ AS+A
Sbjct: 295 YLTSLRNDERISHQLDVKFQEMYLKKVCALLRCNLHEGAVASKAPAEIGESVAVEGDKAQ 354
Query: 347 ---------VPSGAEWSIGDDSKFNLDS----GLLTEKIVCLIESLLEYRGVEDIRCIIF 393
+P S+G+ L + G +T K+ LI+ LL Y+ +D R IIF
Sbjct: 355 DPMDVEEGELPDSQAVSVGEHVDEILGAAVADGKVTPKVQSLIKILLRYQHTDDFRAIIF 414
Query: 394 VERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIV 453
VERV+ A VL + +EL P K + G+N+ ++R+ Q E + +FR G V ++V
Sbjct: 415 VERVVAAQVLPKVFAEL-PSLKFVKCASLIGHNNNQDMRTRQMQ-ETISQFRDGRVTLLV 472
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+ + L N
Sbjct: 473 ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNQQHKVFLRN 532
Query: 514 YLASGNKMRKEVLSHASLPCSPLNNHMYGEDF-----YHVESTGTIATLSSSVSLIYFYC 568
S +RKE + L N + D Y V +TG + +++S+V LI+FYC
Sbjct: 533 AKNSEETLRKEAIERTDLGERRENAILASMDLGDREIYQVPATGAVVSMNSAVGLIHFYC 592
Query: 569 SRLPSDGYFKPTPKFHINK---EMGI----CTLYLPNNCPIQTVIAQ--GNIKTLKQAAC 619
S+LPSD Y P+F +NK + G C L LP N P++ V +++ +Q+ C
Sbjct: 593 SQLPSDRYSILRPEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVC 652
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHPIYFPPE-------- 666
LEACK+LH++GA TD LLPD + A+ G+E P + H Y+P
Sbjct: 653 LEACKRLHEMGAFTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGD 712
Query: 667 --LVNQSPQ---DTKITYHCYLIELKQ-HFNYD---ISARNIVLAMRTELESEIKKVNFD 717
L ++ P + + + Y+++ + F+ D + V+ + +L+ E+ + D
Sbjct: 713 WILADKDPDAKPGSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDEVLDMTMD 772
Query: 718 LEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL--- 773
L V R +T +L+ G + L +++ + F + L +++D N+D D +
Sbjct: 773 LFVARTMITRASLEFCGNLDLSLHELTDLKSFHVRLMSIVLDVNVDPATTPWDPAKAYLF 832
Query: 774 --------RDNLE-IDYLLLPSTGQLIDW-----KTVATVLFPRD----NGSKH-----N 810
D LE +D+ L+ T + W + V D G +
Sbjct: 833 APVAHKVDSDPLEMVDWGLVRKTIETDSWSNPLQRARPDVYLGTDERALGGDRREYGFGK 892
Query: 811 MNCSTMFNARI--------------VHTKSGPLCTCKIHNSLVC--TPHNGQIYC----- 849
+ C F R V +G L + I V P G++
Sbjct: 893 LRCGLAFGQRAHPTYGIRGAVAQFDVVKATGLLSSQDIVEKTVVQEVPPEGKLLIADGFV 952
Query: 850 -ITGVLGHL-------------------NANSLFTRNNGSV-----TTYKKHYEERYGIQ 884
+ G++G + A+S F + +G + T+Y +Y+++YG++
Sbjct: 953 EVEGLVGRIVTAVHSGKRFYVDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVE 1012
Query: 885 LCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE---------LPPELCRIIMAPI 935
L ++PLL GR + H +N LS R + + S + LPPELC ++ P+
Sbjct: 1013 LVCKKQPLLRGRGVSHCKNLLSP-RFETSTGGTLDSLDALDKTYYVMLPPELC--LIHPL 1069
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S +PS+M R++S+LLA+ LK+ + + I KVLEA+T CQE F
Sbjct: 1070 PGSLVRGAQRLPSVMRRVESMLLAIQLKHQI------DYPIAASKVLEALTAASCQETFS 1123
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
E E LGD++LK+ S++LF Y HEG L+ +++I+SN+ L + ++ L +I+
Sbjct: 1124 YERAELLGDAYLKWVVSRRLFLKYPCKHEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQA 1183
Query: 1056 ESFDPKMWIIP------------GDNSG-----------------------------SYE 1074
+ F P W P GD+S S
Sbjct: 1184 DRFAPSRWAAPGVPPVFDEDIKDGDDSDKSLKAEASREVVEIVSEEGEIVVKELSTESAS 1243
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN 1134
+ D + Y + + SKT+ADVVEA IG + GG++ ++ IGI V+F +
Sbjct: 1244 MEDGEIEGDSSAY----RVLSSKTLADVVEAFIGIYYVEGGQDAATHLMNWIGIPVEFDD 1299
Query: 1135 VPYQRQF---QVHAERLVNV--RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 1189
+ +V ++++ LE+ + + FR SLLVEA+TH S +P CYQRL
Sbjct: 1300 AEAELAIGGCEVPETVMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVP-CYQRL 1358
Query: 1190 EFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHE 1249
EF+GDAVLDYLIT +L+ KY L PG LTD+R+A+VNN+ +A +VKH H H+ H S
Sbjct: 1359 EFVGDAVLDYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGSSA 1418
Query: 1250 LYKRINITVDS----FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
L +I V+ +K + S FG + PK LGDI+ES+AGA+F+D+ + V+
Sbjct: 1419 LETQIRNFVNDIQTELDKPGVNS-FGLGDFKA-PKVLGDILESIAGALFLDACLETDHVW 1476
Query: 1306 QSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLF 1365
+ PLL+PM+TPET+ HPVREL E CQ+ +++ ASR A TVEV +G
Sbjct: 1477 KVFEPLLQPMVTPETLPMHPVRELQERCQQQAEALEYK-ASRAGNVA--TVEVYVDGVQI 1533
Query: 1366 EHTFLDADKKTAKKVACKEVLKSLR 1390
+ +A KK A+K+A + L L+
Sbjct: 1534 -GSAQNAQKKMAQKLAARNALVILK 1557
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/1445 (33%), Positives = 745/1445 (51%), Gaps = 101/1445 (6%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
+ V D AR YQLE + A+++N IV+L TG GKT IA++L+ L+RKP +
Sbjct: 39 DSVKKDPRKIARRYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMHEMGDLIRKPQKNIC 98
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFL P V LV QQA+ I TD KVG Y G W++EM ++EVLVMTPQIL
Sbjct: 99 VFLAPTVALVHQQAKVIADSTDFKVGTYCGS-SKRLKHHQDWEQEMGQYEVLVMTPQILH 157
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L + + MI +LI DECHHA+ K H YA IM FY ++ + +PRIFGMTAS
Sbjct: 158 HNLSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMKVFY----KSNSTKVPRIFGMTAS 213
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL 249
P+ K +SSE + + I+ LE ++++KVY+ + L +F+ +T Y Y
Sbjct: 214 PVVGKGASSEANLAKSINSLEHILDAKVYS-VEDKELQSFV--TTPVINIYHYVSTASG- 269
Query: 250 YTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
T L ++ I+ + +L + + +K +++++ +++ L LG+W AL+A+
Sbjct: 270 ETSLHLKIEEIKRQCIATLGRSIEDHQKRMNTKKLLNRMHDNVIFGLQNLGIWGALQASH 329
Query: 310 TI-SCYESDFFAWEQLDGFG--ETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
+ S S+ + DG +++ K+ + A++ + G + S L
Sbjct: 330 ILLSGDHSERHELVEADGNSSDDSLCDKYLAQAAELFTSQCMIGI-LTFDLSSVEILKEP 388
Query: 367 LLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGN 425
+ K++ LI L +R ++++CIIFV R++TA L +L +L L R W++ ++ G
Sbjct: 389 FFSAKLLRLIGILSNFRLQKNMKCIIFVNRIVTARSLSYILQKLKLLRQ--WRSDFLVGV 446
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
++G++ SRK N IV++FR G +N++VAT + EEGLD+Q+C LVI FD TV SFIQS
Sbjct: 447 HAGLKSMSRKTMNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 506
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF 545
RGRARM S+Y +V SG+ ++ + +M EV S + E
Sbjct: 507 RGRARMPQSEYAFLVDSGNKKEIDVIDGFKEDEYRMNMEVTFRTSKETYIIPE----ERI 562
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH-INKEMGI-CTLYLPNNCPIQ 603
+ ++S+G + S+SL++ YCS+LP D YF P P FH ++ GI C + LP+N PI
Sbjct: 563 FRIDSSGASVSSGYSISLLHQYCSKLPHDEYFDPKPSFHYLDDSGGISCHITLPSNAPIN 622
Query: 604 TVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPI 661
++ Q +++ K+ ACL+A ++L+ +GAL+D LLP + + Q G+ + I
Sbjct: 623 QILGTPQLSMEASKREACLKAIEELYNLGALSDCLLPKQDDAEPEVQVSGSSDEDESDAI 682
Query: 662 -------YFPPELVNQS--PQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIK 712
P QS +D + + Y I+ + D + L M T L E +
Sbjct: 683 SRGKLHEMLVPSAFGQSWINEDNIVRLNSYYIKFCP-YPEDRVYKEFGLFMMTCLPMEAE 741
Query: 713 KVNFDLEVERGRLTVNL-KHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILD-- 769
K+ DL + GR + + G ++ +++ + FQ ++I+D L+ ++E +D
Sbjct: 742 KLELDLHLAHGRSVMTMFVPFGVVEFNKDEIKMAENFQEMFLKIILDR-LEFISEFVDLG 800
Query: 770 -GFELRDNLEIDYLLLP------STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFN--AR 820
E YLLLP +DWK V L CS +F A
Sbjct: 801 MSAESHSGTSTFYLLLPVVLQEYGNAMEVDWKIVKRCL------------CSPIFRHPAD 848
Query: 821 IVHTKSGPL-----------CTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGS 869
+ K PL + NSLV PH Y +T V + N N+
Sbjct: 849 TMDKKVFPLDIHLQLANGYRSVRNVENSLVYAPHKKNFYFVTNV--NYEKNGYSPHNDSG 906
Query: 870 VTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS---FELPPE 926
++Y ++ E++ I L ++PLL+ + + ++ N L R+++ EP ++ LPPE
Sbjct: 907 TSSYVDYFIEKFSIHLKCPKQPLLHVKPVSNLHNLLHN-RKREDAEPQELDEYLIYLPPE 965
Query: 927 LCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAIT 986
LC + + S S + +PSIMHRL +LL+A+ LK+ML + I I+VLEA+T
Sbjct: 966 LCELKVIGFSKDIGSSISLLPSIMHRLGNLLVAIELKHMLSSSFPEAAEISAIRVLEALT 1025
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
T+KCQE F LE LE LGD+FLK+A ++ F + + HEG L+ ++ ++N+ L KL +
Sbjct: 1026 TEKCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIK 1085
Query: 1047 QKLPGFIRTESFDPKMWII---PGDNSGSYELNDDSLFNGRKIYVTGRKK---------- 1093
+ L +I ++FDP + P S E + F + G+
Sbjct: 1086 RNLQVYICDQTFDPTQFYALGRPCPRVCSNETEESIHFCLNSVMQQGKATETRCSKNHHW 1145
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERL 1148
+ KT+ADVVEAL+GAFL G + FL IGI+VDF V++
Sbjct: 1146 LHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVVDICIASASYSPLSSE 1205
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
V++ LE L + F LL++A H SY CYQRLEFLGDAVLDYLIT YL++
Sbjct: 1206 VDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLG-GGCYQRLEFLGDAVLDYLITSYLFSA 1264
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP L PG LTD+RS SVNN +A +V +L S L + I VD + S
Sbjct: 1265 YPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDNFLLCDSSGLSEAIKKYVDYVRRPV--S 1322
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT-PETMRFHPVR 1327
G + PKALGD++ES GAI +DSG N V++ + L+P++ +++ PVR
Sbjct: 1323 DNGIKEGPKCPKALGDLVESCVGAILLDSGFNLNKVWKIMTSFLDPIMKFSSSLQLSPVR 1382
Query: 1328 ELTEYCQKNHFSMK-KPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVL 1386
+L E CQ ++ ++ PV S+++ + +V +V NG + +KK A ++A + +
Sbjct: 1383 DLRELCQSHNLELEFLPVPSKLTKRFSVEAKVSGNGVCETASATGQNKKEACRIASQLLF 1442
Query: 1387 KSLRA 1391
+A
Sbjct: 1443 LKFKA 1447
>gi|168027292|ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162682596|gb|EDQ69013.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1460
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/1449 (33%), Positives = 740/1449 (51%), Gaps = 162/1449 (11%)
Query: 25 YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-KPSPFVAVFLVPKVVLVPQ 83
YQ +A E AL +NTI++LETG GKTL+A++L++S A R + + VFL P V+LV Q
Sbjct: 4 YQQQAFEAALNKNTILYLETGCGKTLVAVLLIKSLAKNTRLENDKRLIVFLAPTVILVQQ 63
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
QA I++HTDL VG+Y+G VD W A W+ ++++ EV+VMTPQ+ L+ L+ + K+N+
Sbjct: 64 QARVIRIHTDLNVGEYYGSKNVDTWSRAEWQTQIAEVEVMVMTPQVFLNNLQHGFLKMNI 123
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYW 203
+++LI DECHHA H YA IM FYH ++ G LPRIFGMTASP+ K S
Sbjct: 124 VELLIFDECHHAHKNHAYAQIMKGFYHVNVDKG--RLPRIFGMTASPVTKKGVKSSIGAA 181
Query: 204 QKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP-HALYTHLADELAM-IE 261
+++ LE L+ S+V+ + +P + ++Y + A Y + L + E
Sbjct: 182 EQLFGLEDLLKSEVFAFKDREEIEFVVPTAITVEEYYDAPNLDILAPYKEEIEALIIKFE 241
Query: 262 LKHTRSLENLDLN-EAQAELI---RKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
HT ++ ++ + Q E I +++ ++ + + +CL ELG+W A KAAE +
Sbjct: 242 KAHTDAVASVQAEFKDQTEFIYKLKERANRFHRDVQFCLEELGLWCASKAAEYL------ 295
Query: 318 FFAWEQLDGFGETI------IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEK 371
F L+GFGE I + F + L + VP G+ + + + + G LT K
Sbjct: 296 FKVDNGLEGFGEAIQAFKRNLNLFMRETCGLLKSAVPEGSARLVKKELQDAVSKGYLTPK 355
Query: 372 IVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC 431
+ LI L R ++D++ IIFVER + A+VL L+++L ++++ I G + G
Sbjct: 356 VYHLIGVLFHKRSMKDVKRIIFVERRMAAVVLAYLVNDLQCLRENFRSESICGASIGPH- 414
Query: 432 QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
+R++Q + F +G +N++VAT + EEG+DV++C VI F+ +T+ S IQSRGRAR
Sbjct: 415 TTRREQQCTMTAFNKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRGRARR 474
Query: 492 QNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS----HAS------LP-CSPLNNHM 540
S Y++ ++ G+ + + S +R E +S HAS LP C PL
Sbjct: 475 SGSTYIVFLERGNGAQRDQFSKIKQSELSVRDEAISRVHIHASSAHNSCLPICEPLKT-- 532
Query: 541 YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI---CTLYLP 597
Y V+ TG +S+ L+ +CS+LP D + P ++ +++++G+ C + LP
Sbjct: 533 -----YRVDCTGASVNTETSIELVNRFCSKLPRDESYTPKAEY-LSQKVGLLYKCDIKLP 586
Query: 598 NNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPY 655
PI V+ Q + KQA LEAC +LH+ GAL DNLLP + E ++ +P
Sbjct: 587 FGSPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAADVEKIMQPK 646
Query: 656 NAEHPIYFPPELVNQSPQDTKITYH-----------CYLIELKQHFNYDISARNIVLAMR 704
N+ + ++ + T H Y + H D N VL +
Sbjct: 647 NSSGFGTTAQKELHSVAEAEAFTGHWHTSSSGAVLFAYYMSFDIHPVEDEMHANFVLLIG 706
Query: 705 TELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDK 763
L+ ++ K+ +L + RGR L LGR L +Q+ + FQ LF + +
Sbjct: 707 AALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLTADQLSNAKLFQTILFNGMFSKMIQP 766
Query: 764 LNE--------ILDGFELRDNLEI-----DYLLLPS-------TGQL--IDWKTVATVLF 801
+ E + F L + + + YLLLP+ G L IDWK +
Sbjct: 767 VQENRKRKRESAISSF-LTERMGLWKSNNAYLLLPAVLEGSNDVGTLAPIDWKIIQATSS 825
Query: 802 PRDN----------------GSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNG 845
N K +NC T V T ++ + V T H G
Sbjct: 826 VVKNLRFKFLEILTRPFSFVRRKPPVNCLTFAGNHQV-------ATSELVDVAVLTGHTG 878
Query: 846 QIYCITGVLGHLNANSLFT-RNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY 904
IY + VL A+S F N TY + ++ ++G L +PLL ++ N
Sbjct: 879 IIYPVLRVLHDTTAHSQFPGEKNREFKTYAEFFKIKHGRMLEHPNQPLLQLKQNHRPHNL 938
Query: 905 LSKCRQQKQKEP-------SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
L + + P S E+PPELC ++ S + S ++PS+MHR++S++
Sbjct: 939 LPADAGKIEGTPLVSKATMQSTSVEMPPELC--VVLKFSAAIVRSAYWLPSVMHRIKSVV 996
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
LA L+ + IP ++VL+A+TT +C E+F++E+LE GDSFLKYA S++LF
Sbjct: 997 LASQLR-----RSIDAPKIPVMEVLKALTTTRCNENFNMEALELFGDSFLKYAVSRKLFL 1051
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---------- 1067
+EG+LS ++ R I N AL KL ++ L +IR FDP W PG
Sbjct: 1052 ESSTANEGVLSTRRIRSICNEALHKLAVDRGLSAYIRDCQFDPSRWAAPGMLAAKRVNCH 1111
Query: 1068 ---DN------------SGSY--ELNDDSLFNGR---KIYVT---GRKKVKSKTVADVVE 1104
DN +G + EL D + +I +T G + + SKT++DV E
Sbjct: 1112 CKEDNLLKPFKSTTSKVTGVFGNELLKDKIQTETIKPRIGLTCDKGHRYLCSKTISDVTE 1171
Query: 1105 ALIGAFLSTGGENVG-LIFLDRIGIKVDFVNVPYQRQFQVHAERLV-----NVRHLESLL 1158
ALIGA+L G G L F+ GI V F + + + L +++ E +
Sbjct: 1172 ALIGAYLEYGRNCEGALKFMTWAGIDVHFDSKLMEAASKASPVDLSYDYGEDLKAFEKRI 1231
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
Y+F++ L +EALTH S M+ + RCYQRLEFLGDAVLD+L+T +L+ +P +PG LT
Sbjct: 1232 GYTFKNKYLPLEALTHFSNMVGDQIRCYQRLEFLGDAVLDFLLTRHLFTSHPTSTPGLLT 1291
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS---LGSTFGWESV 1275
+R+ASVNN+ +A +VKH LH ++ H S L +I V SFE S+FG +
Sbjct: 1292 SLRTASVNNERFARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEAADDDQKNSSFGLNGL 1351
Query: 1276 TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK 1335
+ PK LGD++ES+AGAI VD+ + + V+ + PLLEP++TP T+ HPV EL E C
Sbjct: 1352 EA-PKVLGDLVESIAGAILVDTCFDLDKVWAVMMPLLEPIVTPATLDIHPVTELEELCMS 1410
Query: 1336 NHFSMKKPV 1344
+S+K V
Sbjct: 1411 KGYSIKYGV 1419
>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
Length = 1662
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1585 (32%), Positives = 781/1585 (49%), Gaps = 259/1585 (16%)
Query: 36 QNTIVFLETGSGKTLIAIMLLR-SYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDL 94
+NTI +LETG+GKTLIA++L++ Y L + +AVFLVPKV LV QQAE I+ T+
Sbjct: 2 KNTIAYLETGAGKTLIAVLLMKHKYQVLREQGRRMLAVFLVPKVPLVYQQAEVIRNGTNF 61
Query: 95 KVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHH 154
VG Y G+MG DFWD W+ E ++ VMT QILL+ LR S ++ I +LILDECHH
Sbjct: 62 VVGHYCGEMGQDFWDARRWQREFDTRDIFVMTAQILLNILRHSIVRMEAIHLLILDECHH 121
Query: 155 ARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMN 214
A KH Y+ +M EFYH T P +FGMTASP+ K S+++D KI +LE+ ++
Sbjct: 122 AVKKHPYSLVMPEFYHV---TPKDKRPCVFGMTASPVNLKGVSNQEDCAIKIRNLESKLD 178
Query: 215 SKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE------------- 261
S V T L +P + Y + P L++ L +E+ ++E
Sbjct: 179 SIVCTIKDRKELEKHVPMPSEIMVLY---DKPALLFS-LREEIKLMESTVEEAANASVRR 234
Query: 262 -------LKHTRSLENLDLNEAQAELIRK----KVSKINSTLLYCLSELGVWLALKAAET 310
+ + E L L AE +S+ ++Y L ELG W A K + T
Sbjct: 235 SKWKFMGARDAGAKEELRLVYGVAERTESDGAASLSQKLRAIIYALDELGQWCAYKVSLT 294
Query: 311 -ISCYESDFFAWEQLD-GFGETIIKKF----------GSDASQALVTY------------ 346
++ +D QLD F E +KK G+ AS+A
Sbjct: 295 YLTSLRNDERISHQLDVKFQEMYLKKVCALLRCNLHEGAVASKAPAEIGESVAVEGDKAQ 354
Query: 347 ---------VPSGAEWSIGDDSKFNLDS----GLLTEKIVCLIESLLEYRGVEDIRCIIF 393
+P S+G+ L + G +T K+ LI+ LL Y+ +D R IIF
Sbjct: 355 DPMDVEEGELPDSQAVSVGEHVDEILGAAVADGKVTPKVQSLIKILLRYQHTDDFRAIIF 414
Query: 394 VERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIV 453
VERV+ A VL + +EL P K + G+N+ ++R+ Q E + +FR G V ++V
Sbjct: 415 VERVVAAQVLPKVFAEL-PSLKFVKCASLIGHNNNQDMRTRQMQ-ETISQFRDGRVTLLV 472
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+ + L N
Sbjct: 473 ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNQQHKVFLRN 532
Query: 514 YLASGNKMRKEVLSHASLPCSPLNNHMYGEDF-----YHVESTGTIATLSSSVSLIYFYC 568
S +RKE + L N + D Y V +TG + +++S+V LI+FYC
Sbjct: 533 AKNSEETLRKEAIERTDLGERRENAILASMDLGDREIYQVPATGAVVSMNSAVGLIHFYC 592
Query: 569 SRLPSDGYFKPTPKFHINK---EMGI----CTLYLPNNCPIQTVIAQ--GNIKTLKQAAC 619
S+LPSD Y P+F +NK + G C L LP N P++ V +++ +Q+ C
Sbjct: 593 SQLPSDRYSILRPEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVC 652
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHPIYFPPE-------- 666
LEACK+LH++GA TD LLPD + A+ G+E P + H Y+P
Sbjct: 653 LEACKRLHEMGAFTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGD 712
Query: 667 --LVNQSPQ---DTKITYHCYLIELKQ-HFNYD---ISARNIVLAMRTELESEIKKVNFD 717
L ++ P + + + Y+++ + F+ D + V+ + +L+ ++ + D
Sbjct: 713 WILADKDPDAKPGSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDQVLDMTMD 772
Query: 718 LEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL--- 773
L V R +T +L+ G + L +++ + F + L +++D N+D D +
Sbjct: 773 LFVARTMITRASLEFCGNLDLSLHELTDLKSFHVRLMSIVLDVNVDPATTPWDPAKAYLF 832
Query: 774 --------RDNLE-IDYLLLPSTGQLIDW-----KTVATVLFPRD----NGSKH-----N 810
D LE +D+ L+ T + W + V D G +
Sbjct: 833 APVAHKVDSDPLEMVDWGLVRKTIETDSWSNPLQRARPDVYLGTDERALGGDRREYGFGK 892
Query: 811 MNCSTMFNARI--------------VHTKSGPLCTCKIHNSLVC--TPHNGQIYC----- 849
+ C F R V +G L + I V P G++
Sbjct: 893 LRCGLAFGQRAHPTYGIRGAVAQFDVVKATGLLSSQDIVEKTVVQEVPPEGKLLIADGFV 952
Query: 850 -ITGVLGHL-------------------NANSLFTRNNGSV-----TTYKKHYEERYGIQ 884
+ G++G + A+S F + +G + T+Y +Y+++YG++
Sbjct: 953 EVEGLVGRIVTAVHSGKRFYMDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVE 1012
Query: 885 LCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE---------LPPELCRIIMAPI 935
L ++PLL GR + H +N LS R + + S + LPPELC ++ P+
Sbjct: 1013 LVCKKQPLLRGRGVSHCKNLLSP-RFETSTGGTLDSLDALDKTYYVMLPPELC--LIHPL 1069
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S +PS+M R++S+LLA+ LK+ + + I KVLEA+T CQE F
Sbjct: 1070 PGSLVRGAQRLPSVMRRVESMLLAIQLKHQI------DYPIAASKVLEALTAASCQETFS 1123
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
E E LGD++LK+ S++LF Y HEG L+ +++I+SN+ L + ++ L +I+
Sbjct: 1124 YERAELLGDAYLKWVVSRRLFLKYPCKHEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQA 1183
Query: 1056 ESFDPKMWIIP------------GDNSG-----------------------------SYE 1074
+ F P W P GD+S S
Sbjct: 1184 DRFAPSRWAAPGVPPVFDEDIKDGDDSDKSLKAEASREVVEIVSEEGEIVVKELSTESAS 1243
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN 1134
+ D + Y + + SKT+ADVVEA IG + GG++ ++ IGI V+F +
Sbjct: 1244 MEDGEIEGDSSAY----RVLSSKTLADVVEAFIGIYYVEGGQDAATHLMNWIGIPVEFDD 1299
Query: 1135 VPYQRQF---QVHAERLVNV--RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 1189
+ +V ++++ LE+ + + FR SLLVEA+TH S +P YQRL
Sbjct: 1300 AEAELAIGGCEVPETVMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVP-GYQRL 1358
Query: 1190 EFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHE 1249
EF+GDAVLDYLIT +L+ KY L PG LTD+R+A+VNN+ +A +VKH H H+ H S
Sbjct: 1359 EFVGDAVLDYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGSSA 1418
Query: 1250 LYKRINITVDS----FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
L +I V+ +K + S FG + PK LGDI+ES+AGA+F+D+ + V+
Sbjct: 1419 LETQIRNFVNDIQTELDKPGVNS-FGLGDFKA-PKVLGDILESIAGALFLDACLETDHVW 1476
Query: 1306 QSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLF 1365
+ PLL+PM+TPET+ HPVREL E CQ+ +++ ASR +G A TVEV +G
Sbjct: 1477 KVFEPLLQPMVTPETLPMHPVRELQERCQQQAEALEYK-ASR-AGNVA-TVEVYVDGVQI 1533
Query: 1366 EHTFLDADKKTAKKVACKEVLKSLR 1390
+ +A KK A+K+A + L L+
Sbjct: 1534 -GSAQNAQKKMAQKLAARNALVILK 1557
>gi|302794558|ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
gi|300153361|gb|EFJ20000.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
Length = 1686
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/1338 (34%), Positives = 715/1338 (53%), Gaps = 93/1338 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVLV 81
R YQ + + ALK+N IV L TG+GKT+IAIML++S+ L P +AVFL P V LV
Sbjct: 356 RGYQKDVFQRALKENIIVNLGTGTGKTMIAIMLIQSFEDRLSMPQEKRIAVFLAPTVNLV 415
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQA AI+ T LKVG Y+GD GVD W W+ E+ H+VLVMTPQ+ L+ L S KL
Sbjct: 416 IQQARAIESFTVLKVGDYYGDKGVDSWSVKQWQAEVDSHQVLVMTPQVFLNALGTSALKL 475
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+++L++DECHHA H YA IM YH + + P+IFGMTASP+ K SS D
Sbjct: 476 EFVEILVMDECHHAHKNHPYALIMKTHYH---VSCLKSKPKIFGMTASPVIQKGVSSSYD 532
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
K+ LE+++++KVYT +S + + P T ++ +Y + P ++ + +L +++
Sbjct: 533 CNCKLTVLESILDAKVYTVEDKSEIEEYYPNPT---QYKEYYDRPKQSFSSIQTDLEILK 589
Query: 262 LK-HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFF- 319
+ ++ + N E Q + I K + ++ ++ +CL +LG+ AL A E + F
Sbjct: 590 DRLNSEAACNCSEYEQQNK-INKSIDRLLLSINHCLVDLGLLPALLAVEILKSRNKSTFH 648
Query: 320 -AWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF-NLDSGLLTEKIVCLIE 377
W+ E +K + V+ +P ++ S + SG L+ K++ L++
Sbjct: 649 LKWKPDVSLEEEEVKTSLKERFLQNVSSIPRFSQVSSRSYPTLEEMTSGTLSPKVLVLLD 708
Query: 378 SLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSGIQCQSRKK 436
L RG+ ++RCI+FVERVI A+ L L+S L H + Y+ G ++ +
Sbjct: 709 VLERLRGMTNMRCIVFVERVIVAMALAKLISGLSFLSHL--RCDYMTGVRD-TDARNPTQ 765
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q E++ F G +N+++ATS+ EEGLDVQ+C VI FD +T+ S +QSRGRAR S Y
Sbjct: 766 QQEVLHSFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSHVQSRGRARNLLSTY 825
Query: 497 LLMVKSGDSTTQSRLENYLASGNK-MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
+ ++++G+ Q L N L + + + +V+ + + +F+ VES G
Sbjct: 826 VWLLETGN-VEQLNLFNQLCTSERVVEDQVIFRNYMDITREAPPEGDLEFFRVES-GACK 883
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK 615
+ SVS I+ YC+RL D Y+ PKF K+ +CT+ P N P+++V +G ++ +
Sbjct: 884 SSQDSVSFIHEYCARL-GDRYYNAKPKFSF-KDSFVCTVEFPPNAPLRSV--EGPLRRTE 939
Query: 616 Q----AACLEACKKLHQIGAL-TDNLLPDI-VVEKHDAQKRGNEP------YNAEHPIYF 663
Q AACL+AC+KL+ +G + D L PD+ ++ D R NE ++ P+ F
Sbjct: 940 QLAKKAACLQACRKLYDMGEVRRDTLCPDVDDFDEEDQPMRKNESGKRKEIFSTAKPLIF 999
Query: 664 PPELV-NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVER 722
V N+S + C+++E + Y N + +++E+ L
Sbjct: 1000 EGSWVFNESGVQLQFYKICFVVEPPESRTYS----NFGFLVNCVIDAEVTDSEVTLFSRN 1055
Query: 723 GRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFE--LRDNLEID 780
+ + +G IQL NQV + +Q ++++ ++L + L D +
Sbjct: 1056 RVVNARVHRVGPIQLDANQVKAAKAYQ----ELLLNGAFNRLARCSGSPQEILWDKSQA- 1110
Query: 781 YLLLP--STGQLIDWKTV-ATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK--IH 835
+L+LP IDW +V AT R S + + + T + LCT +H
Sbjct: 1111 FLVLPVHDDNDSIDWTSVHATAWVYRTLCSNFSPSSPMDGDGVGEKTHADMLCTANGYVH 1170
Query: 836 NS-----LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDRE 890
+S +V T HNG+++C+TGVL + A SL + TY +Y+++Y L +
Sbjct: 1171 SSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKRG---FTYIDYYKDKYQRTLRLPEQ 1227
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIM 950
PLL + N L + ++Q+ + ELPPELC + I S FVPS +
Sbjct: 1228 PLLKAKPTHAFHNLLIRPKEQEGSRQEESFVELPPELC--LCLEIKSGLIRSLYFVPSFL 1285
Query: 951 HRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYA 1010
HR S + A+ L++ L IP K+LEAIT+KKC E+F ESLE LGDSFLKY
Sbjct: 1286 HRFTSTVCAIQLRSPLWPW------IPAAKILEAITSKKCHEEFSYESLELLGDSFLKYV 1339
Query: 1011 ASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG--- 1067
+Q+LF Y HEG LS ++ R NAAL +L + +IR E F+P W PG
Sbjct: 1340 VTQKLFLVYDKKHEGQLSARRSRATCNAALYQLAKSSGIAEYIRDEEFNPSNWTGPGMLT 1399
Query: 1068 -DNS------GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL 1120
D+S GS+E N+++ F+ +G + ++ K +ADVVEALIGA+L+T G +
Sbjct: 1400 SDSSKCRHQQGSFE-NEENYFSS---CASGHRGIRRKALADVVEALIGAYLATSGPPSAM 1455
Query: 1121 IFLDRIGIKVDFVN--VPYQRQFQVHAERL----VNVRHLESLLNYSFRDPSLLVEALTH 1174
+ ++ I ++F + RQ + AE ++ LE L Y F++ SLLVEA+TH
Sbjct: 1456 ELMKQLDIDIEFDIGLLASARQASLPAESFQHLQASLESLEHKLQYKFQNRSLLVEAITH 1515
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
S P CYQRLEFLGD VLD+L++ +L+ +PGL PG LTD+RSA+VNN +A
Sbjct: 1516 ASQ--PNCLLCYQRLEFLGDGVLDFLVSRHLFETHPGLPPGTLTDLRSAAVNNKWFARLV 1573
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIF 1294
V+HGLH+H+ H S EL I V + ++ S F S PK LGD++ES+ GAIF
Sbjct: 1574 VRHGLHQHLQHGSVELDCEIRKFVQNVKEKPDASCF---EDLSAPKVLGDLLESITGAIF 1630
Query: 1295 VDSGCNREVVFQSIRPLL 1312
VD+ + E +++ + P +
Sbjct: 1631 VDTNFDLERLWRVVLPFV 1648
>gi|157285011|gb|ABV31245.1| dicer-like 3 [Physcomitrella patens]
Length = 1641
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/1549 (31%), Positives = 769/1549 (49%), Gaps = 227/1549 (14%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-K 65
++D ++E P R YQ +A E AL +NTI++LETG GKTL+A++L++S A R +
Sbjct: 55 DADNSQEEQGMLSP--RRYQQQAFEAALNKNTILYLETGCGKTLVAVLLIKSLAKNTRLE 112
Query: 66 PSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM 125
+ VFL P V+LV QQA I++HTDL VG+Y+G VD W A W+ ++++ EV+VM
Sbjct: 113 NDKRLIVFLAPTVILVQQQARVIRIHTDLNVGEYYGSKNVDTWSRAEWQTQIAEVEVMVM 172
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFG 185
TPQ+ L+ L+ + K+N++++LI DECHHA H YA IM FYH ++ G LPRIFG
Sbjct: 173 TPQVFLNNLQHGFLKMNIVELLIFDECHHAHKNHAYAQIMKGFYHVNVDKG--RLPRIFG 230
Query: 186 MTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEI 245
MTASP+ K S +++ LE L+ S+V+ + +P + ++Y +
Sbjct: 231 MTASPVTKKGVKSSIGAAEQLFGLEDLLKSEVFAFKDREEIEFVVPTAITVEEYYDAPNL 290
Query: 246 P-HALYTHLADELAM-IELKHTRSLENLDLN-EAQAELI---RKKVSKINSTLLYCLSEL 299
A Y + L + E HT ++ ++ + Q E I +++ ++ + + +CL EL
Sbjct: 291 DILAPYKEEIEALIIKFEKAHTDAVASVQAEFKDQTEFIYKLKERANRFHRDVQFCLEEL 350
Query: 300 GVWLALKAAETISCYESDFFAWEQLDGFGETI------IKKFGSDASQALVTYVPSGAEW 353
G+W A KAAE + F L+GFGE I + F + L + VP G W
Sbjct: 351 GLWCASKAAEYL------FKVDNGLEGFGEAIQAFKRNLNLFMRETCGLLKSAVPEG--W 402
Query: 354 SIGDDSKFNLDS---GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL 410
+ ++ D+ G LT K+ LI L R ++D++ IIFVER + A+VL L+++L
Sbjct: 403 TAAQTAEELQDAVSKGYLTPKVYHLIGVLFHKRSMKDVKRIIFVERRMAAVVLAYLVNDL 462
Query: 411 LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
++++ I G + G +R++Q + F +G +N++VAT + EEG+DV++C V
Sbjct: 463 QCLRENFRSESICGASIGPHT-TRREQQCTMTAFNKGEINLLVATELAEEGIDVKNCGEV 521
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS--- 527
I F+ +T+ S IQSRGRAR S Y++ ++ G+ + + S +R E +S
Sbjct: 522 IRFNLPKTLRSNIQSRGRARRSGSTYIVFLERGNGAQRDQFSKIXQSELSVRDEAISRVH 581
Query: 528 -HAS------LP-CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
HAS LP C PL Y V+ TG +S+ L+ +CS+LP D + P
Sbjct: 582 IHASSAHNSCLPICEPLKT-------YRVDCTGASVNTETSIELVNRFCSKLPRDESYTP 634
Query: 580 TPKFHINKEMGI---CTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTD 634
++ +++++G+ C + LP PI V+ Q + KQA LEAC +LH+ GAL D
Sbjct: 635 KAEY-LSQKVGLLYKCDIKLPFGSPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALDD 693
Query: 635 NLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH-----------CYL 683
NLLP + E ++ +P N+ + ++ + T H Y
Sbjct: 694 NLLPSLDFELAADVEKIMQPKNSSGFGTTAQKELHSVAEAEAFTGHWHTSSSGAVLFAYY 753
Query: 684 IELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQV 742
+ H D N VL + L+ ++ K+ +L + RGR L LGR L +Q+
Sbjct: 754 MSFDIHPVEDEMHANFVLLIGAALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLTADQL 813
Query: 743 LLCRRFQITLF--------RVIMDHNLDKLNEILDGFELRDNLEI-----DYLLLPS--- 786
+ FQ LF + + ++ K + F L + + + YLLLP+
Sbjct: 814 SNAKLFQTILFNGMFSKMIQPVQENRKRKRESAISSF-LTERMGLWKSNNAYLLLPAVLE 872
Query: 787 ----TGQL--IDWK-------TVATVLFPRDNGSKHN----------------------- 810
G L IDWK V ++ P D KH+
Sbjct: 873 GSNDVGTLAPIDWKIIQATSSVVKNLVLPEDPDFKHSQPRKRFKFLEILTRPFSFVRRKP 932
Query: 811 -MNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFT-RNNG 868
+NC T V T ++ + V T H G IY + VL A+S F N
Sbjct: 933 PVNCLTFAGNHQV-------ATSELVDVAVLTGHTGIIYPVLRVLHDTTAHSQFPGEKNR 985
Query: 869 SVTTYKKHYEERYGIQLCFDREPLLN----------------------GRR--------- 897
TY + ++ ++G L +PLL G R
Sbjct: 986 EFKTYAEFFKIKHGRMLEHPNQPLLQLKQNHRPHNLLPADAGKIEGPTGARKMKKIQKTE 1045
Query: 898 --------------IFHVQNYLSKCRQQKQKEPSK-----ISFELPPELCRIIMAPISLS 938
++++++ + + +K SK S E+PPELC ++ S +
Sbjct: 1046 ATLVEARSVEEDFEVYNMKDQANSSLSEVEKVVSKATMQSTSVEMPPELC--VVLKFSAA 1103
Query: 939 TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLES 998
S ++PS+MHR++S++LA L+ + IP ++VL+A+TT +C E+F++E+
Sbjct: 1104 IVRSAYWLPSVMHRIKSVVLASQLR-----RSIDAPKIPVMEVLKALTTTRCNENFNMEA 1158
Query: 999 LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESF 1058
LE GDSFLKYA S++LF +EG+LS ++ R I N AL KL ++ L +IR F
Sbjct: 1159 LELFGDSFLKYAVSRKLFLESSTANEGVLSTRRIRSICNEALHKLAVDRGLSAYIRDCQF 1218
Query: 1059 DPKMWIIPG-------------DN------------SGSY--ELNDDSLFNGR---KIYV 1088
DP W PG DN +G + EL D + +I +
Sbjct: 1219 DPSRWAAPGMLAAKRVNCHCKEDNLLKPFKSTTSKVTGVFGNELLKDKIQTETIKPRIGL 1278
Query: 1089 T---GRKKVKSKTVADVVEALIGAFLSTGGENVG-LIFLDRIGIKVDFVNVPYQRQFQVH 1144
T G + + SKT++DV EALIGA+L G G L F+ GI V F + + +
Sbjct: 1279 TCDKGHRYLCSKTISDVTEALIGAYLEYGRNCEGALKFMTWAGIDVHFDSKLMEAASKAS 1338
Query: 1145 AERLV-----NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
L +++ E + Y+F++ L +EALTH S M+ + RCYQRLEFLGDAVLD+
Sbjct: 1339 PVDLSYDYGEDLKAFEKRIGYTFKNIYLPLEALTHFSNMVGDQIRCYQRLEFLGDAVLDF 1398
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
L+T +L+ +P +PG LT +R+ASVNN+ +A +VKH LH ++ H S L +I V
Sbjct: 1399 LLTRHLFTSHPTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLLHQIEEFVK 1458
Query: 1260 SFEKLS---LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
SFE S+FG + + PK LGD++ES+AGAI VD+ + + V+ + PLLEP++
Sbjct: 1459 SFEAADDDQKNSSFGLNGLEA-PKVLGDLVESIAGAILVDTCFDLDKVWAVMMPLLEPIV 1517
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLF 1365
TP T+ HPV EL E C +S+K V + EVQ + LF
Sbjct: 1518 TPATLDIHPVTELEELCMSKGYSIKYGVHKEDECNSRAIYEVQISDELF 1566
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/1449 (32%), Positives = 749/1449 (51%), Gaps = 112/1449 (7%)
Query: 4 VSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL 63
+S + + + V D AR YQLE + A+++N IV+L TG GKT IA++L+ +L+
Sbjct: 32 LSQDKNHDDSVKKDPRKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMYGMGHLI 91
Query: 64 RKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
RKP + VFL P V LV QQA+ I T+ KVG Y G W++E+ ++EVL
Sbjct: 92 RKPQKNICVFLAPTVALVHQQAKVIADSTNFKVGTYCGS-SKRLKRHQDWEQEIGQYEVL 150
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLP 181
VMTPQILL L + + MI +LI DECHHA+ K H YA IM FY ++ S +P
Sbjct: 151 VMTPQILLHNLSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMKVFY----KSNSSKVP 206
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
RIFGMTASP+ K +SSE + + I+ LE ++++KVY+ + L +F+ +T Y
Sbjct: 207 RIFGMTASPVVGKGASSEANLAKSINSLEHILDAKVYS-VEDKELQSFV--TTPVINIYH 263
Query: 242 YDEIPH---ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKV-SKINSTLLYCLS 297
Y +LY + + RS+E+ Q + KK+ ++++ +++ L
Sbjct: 264 YVSTASGETSLYLKIEEIKRQCIANLGRSIED-----HQKRMNAKKLLNRMHDNVIFGLQ 318
Query: 298 ELGVWLALKAAETI-SCYESDFFAWEQLDGFG--ETIIKKFGSDASQALVTYVPSGAEWS 354
LG+W AL+A+ + S S+ + +G +++ K+ + A++ + G
Sbjct: 319 NLGIWGALQASHILLSGDRSERHELVEAEGNSSDDSLCDKYLAQAAELFTSQCMIGDR-- 376
Query: 355 IGDDSKFN-LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LP 412
+ D S L + K++ LI L +R ++++CIIFV R++TA L +L +L L
Sbjct: 377 VTDLSSVEILKEPFFSAKLLRLIGILSNFRLQKNMKCIIFVNRIVTARSLSYILQKLKLL 436
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
R W++ ++ G ++G++ SRK N IV++FR G +N++VAT + EEGLD+Q+C LVI
Sbjct: 437 RQ--WRSDFLVGVHAGLKSMSRKTMNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIR 494
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
FD TV SFIQSRGRARM S+Y +V SG+ ++ + +M E+ S
Sbjct: 495 FDLPETVASFIQSRGRARMPQSEYAFLVDSGNKKELDIIDGFEKDEYRMNMEITFRTSKE 554
Query: 533 CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH-INKEMGI 591
+ E + V+S+G + S+SL++ YCS+LP D YF P P F+ ++ GI
Sbjct: 555 TYIIPE----ERIFRVDSSGASVSSGYSISLLHQYCSKLPHDEYFDPKPCFYYLDDSGGI 610
Query: 592 -CTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQ 648
C + LP+N PI ++ Q +++ K+ ACL+A ++L+ +G L+D LLP + +AQ
Sbjct: 611 SCHITLPSNAPINQILGTPQLSMEASKRDACLKAIEELYNLGTLSDCLLPKQDDAEPEAQ 670
Query: 649 KRGNEPYN--------AEHPIYFPPELVNQS--PQDTKITYHCYLIELKQHFNYDISARN 698
G+ + E P QS +D + + Y I+ + D +
Sbjct: 671 VSGSSDEDECEDAISRGELHEMLVPSAFGQSWINEDNIVRLNSYYIKFCP-YPEDRVYKE 729
Query: 699 IVLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
L + L E +K+ DL + GR + G ++ +++ + FQ ++I+
Sbjct: 730 FGLFIMVRLPMEAEKLELDLHLAHGRSVMTKFVPFGVVEFDKDEIKMAENFQEMFLKIIL 789
Query: 758 DHNLDKLNEILD---GFELRDNLEIDYLLLP------STGQLIDWKTVATVLFPRDNGSK 808
D L+ ++E +D G E YLLLP +DWKTV L
Sbjct: 790 DR-LEFVSEFVDLGMGAESHTGTSTFYLLLPVVLQEYGNAMKVDWKTVKRCL-------- 840
Query: 809 HNMNCSTMFN--ARIVHTKSGPL-----------CTCKIHNSLVCTPHNGQIYCITGVLG 855
CS +F A + K PL + NSLV PH Y +T V
Sbjct: 841 ----CSPIFRHPADTMDKKVFPLDIHLQLANGYRSVRDVENSLVYAPHKKNFYFVTNV-- 894
Query: 856 HLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKE 915
+ N N+ ++Y ++ E++ I L +PLL+ + + ++ N L R+ + E
Sbjct: 895 NYQKNGYSPHNDSGTSSYVDYFIEKFSIHLKCPEQPLLHVKPVSNLHNLLHN-RKHEDAE 953
Query: 916 PSKIS---FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ 972
P ++ LPPELC + + S S + +PSIMHRL +LL+A+ LK+ L +
Sbjct: 954 PQELDEYLIYLPPELCELKIIGFSKDIGSSISLLPSIMHRLGNLLVAIELKHRLSSSFPE 1013
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
I ++VLEA+TT+KCQE F LE LE LGD+FLK+A ++ F + + HEG L+ ++
Sbjct: 1014 AAEISALRVLEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRS 1073
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---------DNSGSYELNDDSLFNG 1083
++N+ L KL ++ L +I ++FDP + G + S +S+
Sbjct: 1074 NAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPCPRLCSNETKESIHFCLNSVKEQ 1133
Query: 1084 RKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----VN 1134
K+ T K + KT+ADVVEAL+GAFL G + FL IGI+VDF V+
Sbjct: 1134 GKVTETQCNKNHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVVD 1193
Query: 1135 VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1194
+ + V++ LE L + F LL++A H SY CYQRLEFLGD
Sbjct: 1194 ICIASASYLPLSSEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLG-GGCYQRLEFLGD 1252
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVLDYLIT Y+++ YP L PG LTD+RS SVNN +A +V K +L S L + I
Sbjct: 1253 AVLDYLITSYVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKFLLCDSSGLSEAI 1312
Query: 1255 NITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
VD + ++ + PKALGD++ES GAI +DSG N V++ + L+
Sbjct: 1313 KKYVDYIRRPVSDNSI--KEGPKCPKALGDLVESCVGAILLDSGFNLNKVWKIMTSFLDS 1370
Query: 1315 MIT-PETMRFHPVRELTEYCQKNHFSMK-KPVASRISGKAAVTVEVQANGRLFEHTFLDA 1372
++ +++ PVR+L E CQ ++ ++ PV S+++ + +V +V NG +
Sbjct: 1371 IMKFSSSLQLSPVRDLRELCQSHNMELEFLPVPSKLTKRFSVEAKVSGNGVCETASATGQ 1430
Query: 1373 DKKTAKKVA 1381
+KK A ++A
Sbjct: 1431 NKKEACRIA 1439
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/1463 (32%), Positives = 745/1463 (50%), Gaps = 150/1463 (10%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQLE + AL++N IV+L TG GKT IA++L+ +L+RKP V VFL P
Sbjct: 41 DPRKIARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPLKNVCVFLAP 100
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQ I+ D KVG Y G+ W++E+ ++EVLVMTPQILL L
Sbjct: 101 TVALV-QQVRVIEQSIDFKVGVYCGNSN-HLKSHRDWEKEIEQNEVLVMTPQILLHTLGH 158
Query: 137 SYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S+ K+ +I +LI DECHHA+ H YA IM FY +TGD PRIFGMTASP+ K
Sbjct: 159 SFIKMELISLLIFDECHHAQVQSSHPYAEIMKVFY----KTGDGKFPRIFGMTASPVVGK 214
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK--YDEIPHALYTH 252
+S++ + + I+ LE L+++KVY+ L F+ + Y +E + T+
Sbjct: 215 GASNQANLPKSINSLENLLDAKVYSVEDNEELELFVASPVVRIYLYAPVANEKSSSYMTY 274
Query: 253 LA--DEL---AMIEL-KHTRSLENL-DLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL 305
+ +E+ ++EL K S ++L L A+ IR ++ +++CL LG W AL
Sbjct: 275 FSKLEEIKRKCLLELHKKADSCQSLHGLQNAKKVFIR-----MHDNVVFCLENLGFWGAL 329
Query: 306 KAAETISCYESDFFAWEQL----DGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
+A + + D F W L ++ K+ + A+ A D F
Sbjct: 330 QACKIL--LSDDHFEWNALIEAEGNIDASVCDKYLAQAANMF-------ASVCTKDCIAF 380
Query: 362 NLDS-GLLTE-----KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+L S +LTE K++ LI L +R +++ I+FV R++TA L +L L
Sbjct: 381 DLSSVEVLTEPFFSRKLLRLIGILSTFRLQPNMKGIVFVNRIVTARSLSYVLQNL-KFLI 439
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+WK ++ G +SG++ SRK N I+E+F+ G +N+++AT + EEGLD+Q+C LV+ FD
Sbjct: 440 SWKCDFLVGVHSGLKSMSRKTMNSILEKFKTGKLNLLIATKVGEEGLDIQTCCLVVRFDL 499
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP 535
TV SFIQSRGRARM S+Y +V SG+ +E + ++M E+ S S
Sbjct: 500 PETVASFIQSRGRARMPQSEYAFLVDSGNQKELDLIERFRRDEDRMNMEISSRTS----- 554
Query: 536 LNNHMY---GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-- 590
N + E Y V+ +G + + S+SL++ YCS+LP D YF P P+F ++G
Sbjct: 555 --NETFVSIEEKVYKVDESGACISSAYSISLLHHYCSKLPHDEYFDPKPQFFFFDDLGGT 612
Query: 591 ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQ 648
IC + LP N P+ ++ Q + + K+ ACL+A ++LH++G+L++ LLP ++
Sbjct: 613 ICHIILPANAPVHQIVGTPQSSREAAKKDACLKAIEQLHKLGSLSNFLLPHEKDVNEESM 672
Query: 649 KRGNEPYNAE--------HPIYFPPELVNQ-SPQDTKITYHCYLIELKQHFNYDISARNI 699
+EP N E H + P + + I H Y I+ D +
Sbjct: 673 LASSEPENNEGEGVRGELHEMLVPAVFKESLTSSENWINLHSYFIKFCP-VPEDRIYKKF 731
Query: 700 VLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
L +R L E +++ +L + GR + L LG + +++ FQ +VI+D
Sbjct: 732 GLFIRAPLPLEAEQMELNLHLACGRYVATKLVPLGCLAFHRDEITQAIYFQEMFLKVILD 791
Query: 759 HNLDKLNEIL-----DGFELRDNLEIDYLLLP------STGQLIDWKTVATVL------- 800
+ D + E + FE + YLLLP +DW+TV L
Sbjct: 792 RS-DFVPEFVTLGKNSFFESSPSF---YLLLPVLLCDHGNRVTVDWETVGRCLSSPVFRC 847
Query: 801 -----FPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLG 855
P D+ + C ++ + I NSLV PH Y IT +
Sbjct: 848 VEKECLPSDDCLQLANGCRSIRD---------------IENSLVYIPHKKHFYFITNIDR 892
Query: 856 HLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQ-- 913
NA S S ++Y + +R+GIQL + +PLL + +F + N L R++
Sbjct: 893 GKNARS--PHKCSSTSSYMEFLIQRFGIQLKYPEQPLLQAKPLFSLHNLLHNRRKEDSVT 950
Query: 914 KEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQN 973
+E + + PPELC + + S S + +PSIMHRL++LL+A+ LK++L +
Sbjct: 951 QELDEYLIDFPPELCELKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKSLLSASFSEG 1010
Query: 974 VTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKER 1033
+ ++LEA+TT++CQE LE LE LGD+FLK+A + LF + EG L+ K+
Sbjct: 1011 AEVTAYRILEALTTERCQERLSLERLEILGDAFLKFAVGRHLFLLHDTLDEGELTRKRSN 1070
Query: 1034 IISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---------DNSGSYELNDDSLFNGR 1084
++N+ L KL + L +IR + FDP+ + G ++ GS ++ S G+
Sbjct: 1071 AVNNSNLLKLASRRNLQVYIRDQPFDPRQFFALGHPCPVICTKESEGSIHSSNRSNAKGQ 1130
Query: 1085 KIYVT-----GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-----DFVN 1134
+ + G + KT+ADVVEAL+GAF+ G FL +GI+V D
Sbjct: 1131 ENTIEVRCSRGHHWLYKKTIADVVEALVGAFIVDSGFRAATAFLKWLGIRVNIEASDVTK 1190
Query: 1135 VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1194
V + + ++V LE L++ F + L+++A H SY CYQRLEFLGD
Sbjct: 1191 VCLASRTFMPLAPSIDVSSLEDSLDHQFVNRGLVLQAFVHPSYN-KHGGGCYQRLEFLGD 1249
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVLDYLIT YL++ YP L PG LTD+RSA VNN +A+ +V ++ ++ S L + I
Sbjct: 1250 AVLDYLITSYLFSVYPKLKPGLLTDLRSALVNNRAFAIVAVDRSFNEFLICDSGNLSEAI 1309
Query: 1255 NITVD-----SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
V+ + EK SL PK LGD++ES GAIF+D+G + +++ +
Sbjct: 1310 ETYVNFVKRPAVEKDSLEG-------PKCPKVLGDLVESCIGAIFLDTGFDLNCIWKLML 1362
Query: 1310 PLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGR--LFEH 1367
L+P++ + +P REL E+C+ + + ++ P R VE + G+ +
Sbjct: 1363 SFLDPILNSSNVLLNPFRELHEFCESHKWKLQFPTLKR---DMNFLVEAKVTGKDICLDA 1419
Query: 1368 TFLDADKKTAKKVACKEVLKSLR 1390
+ +++KK A ++A ++++ L+
Sbjct: 1420 SANNSNKKEAIRIASEQIIVKLK 1442
>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/1426 (32%), Positives = 730/1426 (51%), Gaps = 85/1426 (5%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQLE + AL++N IV++ TG GKT IA++L+ + +L+RKP + VFL P
Sbjct: 42 DPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICVFLAP 101
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQA I+ D KVG Y G+ W++E ++EV VMTPQILL GL
Sbjct: 102 TVALVQQQARVIEESIDFKVGTYCGN-SRRLRTHHDWEKEFEQYEVFVMTPQILLRGLYH 160
Query: 137 SYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ ++ +I +LI DECHHA+ H YA IM FY +T + LPRIFGMTASP+ K
Sbjct: 161 CFIRMELIALLIFDECHHAQVQSNHPYAEIMKVFY----KTSSTRLPRIFGMTASPVVGK 216
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
+S + + + I+ LE L+++KVY+ ++ L F+ ++ K Y Y + + +
Sbjct: 217 GASDQANLPKCINSLENLLHAKVYSVENQQELERFV--ASPKINVYCYHPDIN-MTSSTC 273
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI--- 311
+L I+ + SL + +K + +++ L++ + LG+W AL+A+ +
Sbjct: 274 KKLEEIKSQCVLSLRRNVEDHKSLRSTKKLLQRMHDNLIFSMENLGLWGALQASRILLSG 333
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN--LDSGLLT 369
E + + + + K+ ++ L + + IG D + L +
Sbjct: 334 DHAERNELMEAEGSASDDRLCDKYLDQSANVLAS---ECIQDGIGSDISYVDVLKEPFFS 390
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI 429
K++ LI L +R +++CIIFV R++TA L +L L WK ++ G +SG+
Sbjct: 391 RKLLRLIGILSTFRRQPNMKCIIFVNRIVTARSLAYILQNL-KFLSYWKCDFLVGVHSGL 449
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ SRK N I+++FR +N++VAT + EEGLD+Q+C LVI FD TV SFIQSRGRA
Sbjct: 450 KSMSRKTMNIILDKFRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 509
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
RM S+Y +V SG +E++ ++M E+ S+ S E Y V+
Sbjct: 510 RMPQSEYAFLVDSGKQKEIDLIEHFKKDEDRMNMEI----SVRTSSEAFTDLEERIYKVD 565
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIA 607
S+G + S+SL++ YCS+L D YF P P+F+ + G +C + LP++ PI +++
Sbjct: 566 SSGASISSVYSISLLHQYCSKLLHDEYFNPKPEFYYFDDSGGTVCQINLPSSAPIHQIVS 625
Query: 608 --QGNIKTLKQAACLEACKKLHQIGALTDNLLPD---------IVVEKHDAQKRGNEPYN 656
Q +++ K+ ACL+A + LH +GAL D LLPD +V D+ + +
Sbjct: 626 TPQSSMEAAKKDACLKAIQDLHVLGALNDYLLPDQGNAHEELMLVSSDSDSCEADEDSRE 685
Query: 657 AEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNF 716
H + P L + I + Y I+ D R L ++ L +E +++
Sbjct: 686 ELHEMLVPAALKDSWSNLEHICLNSYYIKFTP-IPEDRIYRKFGLFVKAPLPAEAERMVL 744
Query: 717 DLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFE--L 773
DL + GR + L G + N++L FQ +VI++ ++ + + G
Sbjct: 745 DLHLSHGRSVMTELVPSGVTEFDENEILQAHNFQEMYLQVILNRSIFETEIVHLGKSDFC 804
Query: 774 RDNLEIDYLLLP------STGQLIDWKTVATVLF------PRDNGSKHNMNCSTMFNARI 821
+ + YLLLP +DW+ + L P D K + A
Sbjct: 805 KSSSSTFYLLLPVILNECENMITVDWQIIRRCLSSPIFRNPADRVDKLPPLNDHLRLADG 864
Query: 822 VHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERY 881
V+ +S + NSLV P+ + ++ + N S + ++ T+K +
Sbjct: 865 VYRES------DVINSLVYAPYKKAFFFVSRISAGRNGYSPYKDSSHLEYTWKT-----F 913
Query: 882 GIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS---FELPPELCRIIMAPISLS 938
GI L F ++PLL+ +R+F ++N L R+ E ++ ++PPELC + + S
Sbjct: 914 GIHLEFPKQPLLSAKRLFSLRNLLHN-RKHGSSESHELEEHFMDIPPELCHLKIIGFSKD 972
Query: 939 TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLES 998
S + +PSIMHRL++LL+A+ LKNML + I +VLEA+TT+KC E F LE
Sbjct: 973 IGSSVSLLPSIMHRLENLLVAIELKNMLSASFPEGAEITAHRVLEALTTEKCLERFSLER 1032
Query: 999 LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESF 1058
LE LGD+FLK+A ++LF Y EG L+ ++ +++N+ L KL + L +IR +SF
Sbjct: 1033 LEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIRDQSF 1092
Query: 1059 DPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK---------SKTVADVVEALIGA 1109
DP + G + + + T +V+ KT+ADVVEAL+GA
Sbjct: 1093 DPGQFFALGHRCPRICEKETEMAIHSRCGKTPTTEVRCSKCHHWLHKKTIADVVEALVGA 1152
Query: 1110 FLSTGGENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRD 1164
F+ G +FL IGI+VDF +N + +V LE LL + F
Sbjct: 1153 FIVDSGFKAATVFLKWIGIQVDFEAFQVINACISSTSYMQLASSTDVPALEKLLGHEFLH 1212
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
LL++A+ H SY CYQRLEFLGDAVLDYLIT YLY+ YP L PG +TD+RS S
Sbjct: 1213 KGLLLQAIVHPSYN-KHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLS 1271
Query: 1225 VNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
VNN +A +V LH+ ++ + L + I VD +L PKALGD
Sbjct: 1272 VNNKSFANVAVSRSLHEFLICDASSLSEAIKKYVDFIRTPTLDKDL--HEGPKCPKALGD 1329
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPV 1344
++ES GAI +D G + + + +L+ +++ ++ +P+REL E CQ +++ ++ P
Sbjct: 1330 LVESCMGAILLDKGFDLNHAWNIMLSILDRIMSFSDLQLNPIRELQELCQHHNWDLQFPT 1389
Query: 1345 ASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
S+ G V +V + + +A++K A+++A ++ K L+
Sbjct: 1390 -SKQGGTFLVEAKVSGDDICTTASATNANRKDARRIASNQLFKKLK 1434
>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/1425 (32%), Positives = 732/1425 (51%), Gaps = 84/1425 (5%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQLE + AL++N IV++ TG GKT IA++L+ + +L+RKP + VFL P
Sbjct: 42 DPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICVFLAP 101
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQA I+ D KVG Y G+ W++E ++EV VMTPQILL GL
Sbjct: 102 TVALVQQQARVIEESIDFKVGTYCGN-SRRLRTHHDWEKEFEQYEVFVMTPQILLRGLYH 160
Query: 137 SYFKLNMIKVLILDECHHAR--GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ ++ +I +LI DECHHA+ H YA IM FY +T + LPRIFGMTASP+ K
Sbjct: 161 CFIRMELIALLIFDECHHAQVQSNHPYAEIMKVFY----KTSSTRLPRIFGMTASPVVGK 216
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
+S + + + I+ LE L+++KVY+ ++ L F+ ++ K Y Y + + +
Sbjct: 217 GASDQANLPKCINSLENLLHAKVYSVENQQELERFV--ASPKINVYCYHPDIN-MTSSTC 273
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI--- 311
+L I+ + SL + +K + +++ L++ + LG+W AL+A+ +
Sbjct: 274 KKLEEIKSQCVLSLRRNVEDHKSLRSTKKLLQRMHDNLIFSMENLGLWGALQASRILLSG 333
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN--LDSGLLT 369
E + + + + K+ ++ L + + IG D + L +
Sbjct: 334 DHAERNELMEAEGSASDDRLCDKYLDQSANVLAS---ECIQDGIGSDISYVDVLKEPFFS 390
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI 429
K++ LI L +R +++CIIFV R++TA L +L L WK ++ G +SG+
Sbjct: 391 RKLLRLIGILSTFRRQPNMKCIIFVNRIVTARSLAYILQNL-KFLSYWKCDFLVGVHSGL 449
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ SRK N I+++FR +N++VAT + EEGLD+Q+C LVI FD TV SFIQSRGRA
Sbjct: 450 KSMSRKTMNIILDKFRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 509
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
RM S+Y +V SG +E++ ++M E+ S+ S E Y V+
Sbjct: 510 RMPQSEYAFLVDSGKQKEIDLIEHFKKDEDRMNMEI----SVRTSSEAFTDLEERIYKVD 565
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIA 607
S+G + S+SL++ YCS+L D YF P P+F+ + G +C + LP++ PI +++
Sbjct: 566 SSGASISSVYSISLLHQYCSKLLHDEYFNPKPEFYYFDDSGGTVCQINLPSSAPIHQIVS 625
Query: 608 --QGNIKTLKQAACLEACKKLHQIGALTDNLLPD-------IVVEKHDAQKRGNEPYNAE 658
Q +++ K+ ACL+A + LH +GAL D LLPD +++ D+ +E E
Sbjct: 626 TPQSSMEAAKKDACLKAIQDLHVLGALNDYLLPDQGNAHEELMLVSSDSDSCEDEDSREE 685
Query: 659 -HPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFD 717
H + P L + I + Y I+ D R L ++ L +E +++ D
Sbjct: 686 LHEMLVPAALKDSWSNLEHICLNSYYIKFTP-IPEDRIYRKFGLFVKAPLPAEAERMVLD 744
Query: 718 LEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFE--LR 774
L + GR + L G + N++L FQ +VI++ ++ + + G +
Sbjct: 745 LHLSHGRSVMTELVPSGVTEFDENEILQAHNFQEMYLQVILNRSIFETEIVHLGKSDFCK 804
Query: 775 DNLEIDYLLLP------STGQLIDWKTVATVLF------PRDNGSKHNMNCSTMFNARIV 822
+ YLLLP +DW+ + L P D K + A V
Sbjct: 805 SSSSTFYLLLPVILNECENMITVDWQIIRRCLSSPIFRNPADRVDKLPPLNDHLRLADGV 864
Query: 823 HTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYG 882
+ +S + NSLV P+ + ++ + N S + ++ T+K +G
Sbjct: 865 YRES------DVINSLVYAPYKKAFFFVSRISAGRNGYSPYKDSSHLEYTWKT-----FG 913
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS---FELPPELCRIIMAPISLST 939
I L F ++PLL+ +R+F ++N L R+ E ++ ++PPELC + + S
Sbjct: 914 IHLEFPKQPLLSAKRLFSLRNLLHN-RKHGSSESHELEEHFMDIPPELCHLKIIGFSKDI 972
Query: 940 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESL 999
S + +PSIMHRL++LL+A+ LKNML + I +VLEA+TT+KC E F LE L
Sbjct: 973 GSSVSLLPSIMHRLENLLVAIELKNMLSASFPEGAEITAHRVLEALTTEKCLERFSLERL 1032
Query: 1000 ETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD 1059
E LGD+FLK+A ++LF Y EG L+ ++ +++N+ L KL + L +IR +SFD
Sbjct: 1033 EVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIRDQSFD 1092
Query: 1060 PKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK---------SKTVADVVEALIGAF 1110
P + G + + + T +V+ KT+ADVVEAL+GAF
Sbjct: 1093 PGQFFALGHRCPRICEKETEMAIHSRCGKTPTTEVRCSKCHHWLHKKTIADVVEALVGAF 1152
Query: 1111 LSTGGENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDP 1165
+ G +FL IGI+VDF +N + +V LE LL + F
Sbjct: 1153 IVDSGFKAATVFLKWIGIQVDFEAFQVINACISSTSYMQLASSTDVPALEKLLGHEFLHK 1212
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
LL++A+ H SY CYQRLEFLGDAVLDYLIT YLY+ YP L PG +TD+RS SV
Sbjct: 1213 GLLLQAIVHPSYN-KHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSV 1271
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDI 1285
NN +A +V LH+ ++ + L + I VD +L PKALGD+
Sbjct: 1272 NNKSFANVAVSRSLHEFLICDASSLSEAIKKYVDFIRTPTLDKDL--HEGPKCPKALGDL 1329
Query: 1286 IESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVA 1345
+ES GAI +D G + + + +L+ +++ ++ +P+REL E CQ +++ ++ P
Sbjct: 1330 VESCMGAILLDKGFDLNHAWNIMLSILDRIMSFSDLQLNPIRELQELCQHHNWDLQFPT- 1388
Query: 1346 SRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
S+ G V +V + + +A++K A+++A ++ K L+
Sbjct: 1389 SKQGGTFLVEAKVSGDDICTTASATNANRKDARRIASNQLFKKLK 1433
>gi|330370549|gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/1477 (32%), Positives = 741/1477 (50%), Gaps = 144/1477 (9%)
Query: 25 YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVVLVPQ 83
YQL+ E A ++N I L+TG GKT+IA+ML++ + + S + +FL P V LV Q
Sbjct: 48 YQLQVYEVAKRRNIIALLDTGVGKTMIAVMLIKDFGQAIESTESKKLIIFLAPTVHLVNQ 107
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
I+ +L+V +Y+G GVD W W++E +H+VLVMTPQILLD LR ++ L+M
Sbjct: 108 VCFLIRESLNLEVEQYYGAKGVDEWTLDCWEKETKEHDVLVMTPQILLDALRKAFLSLDM 167
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYW 203
+ ++I+DECH A G H YA IM EFYH+ +N P+IFGMTASP+ SK S +
Sbjct: 168 VSLMIIDECHRATGNHPYAKIMKEFYHK-----SNNKPKIFGMTASPVVSKGVLSSNNCD 222
Query: 204 QKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE-- 261
++ +LE +++S +YT + + +P + +F+ A ++ L D A +E
Sbjct: 223 GQMSELECVLDSLIYTIEDRTEMEACVPSAKESCRFFD-----PAQFSSL-DLKAKVEAS 276
Query: 262 -LKHTRSLENL---------DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
LK SL NL D+++ L RK++S ++ +L+CL LG+ A +A
Sbjct: 277 WLKTDGSLSNLQSSLQTSHKDMDDKLKNL-RKRLSNDHAKVLHCLDNLGLICAYEAVNI- 334
Query: 312 SCYESDFFAWEQLDGFGETII--KKFGSDASQALVTYVPSGAE--WSIGDDSKFNLDSGL 367
C E+ E+ + E+++ K F + + +P G + + G D +D G
Sbjct: 335 -CLENILDTTEESKAYRESVLQYKNFLEEVQCRIGESLPLGDKNFLNSGFDYLKAVDLGY 393
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT--WKTKYIAGN 425
++ K+ L++ + + C+IFVER+ITA V++ ++ C + Y+ G+
Sbjct: 394 ISPKLHELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKV---SCLSHFMVSYMTGS 450
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
N+ + + K Q E +E FR G VN++ T ++EEG+ V +C VI FD +TV S++QS
Sbjct: 451 NTSVDSLAPKIQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQS 510
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH--ASLPCSPLNNHMYGE 543
RGRAR NS++++M++ G+ +++L + + S M + S PC L +H + E
Sbjct: 511 RGRARQNNSEFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCL-LKDHTFEE 569
Query: 544 -DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNC 600
+ + V++TG T S+VSLI+ YC +LP D Y+ P P F G+ C L LP N
Sbjct: 570 TNVFIVDATGASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNA 629
Query: 601 PIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA-QKRGNEPYNA 657
+QT++ N KQ CLEACK+LHQ+GAL D+L P I +A +G +
Sbjct: 630 AVQTIVGPPSRNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAG 689
Query: 658 E------------HPIYFPPELVNQ-SPQDTKITYHCYLIELKQHFNYDISARNIVLAMR 704
H L + + Y + K + + VL +
Sbjct: 690 AGAGAGTTKRKELHGTTCIQALCGSWGEKSDDAVFFAYKFDFKCNI-ITVVYSGFVLLIE 748
Query: 705 TELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNL--D 762
++L ++ DL + + ++ G+++L Q++ +RFQ F +
Sbjct: 749 SKLADDVGNTEMDLFLIGKMVKASVSSCGQVRLNAEQMMKAKRFQEFFFNGLFGKLFVGS 808
Query: 763 KLNEILDGFELRDNLEI------DYLLLP----STGQL-IDWKTVATVLFPR-------- 803
K + F LRD YLLLP ST +L I W +
Sbjct: 809 KSSGAPREFLLRDKTSSLWSPSRMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSL 868
Query: 804 -------DNGSKHNMN-----CSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCIT 851
D GS ++N + I+ + + + N++V H G+IYCI
Sbjct: 869 LGTEQSDDGGSNPSLNSTGSPVTDCKETNIIRFANSSVDANSLRNTVVLAIHTGRIYCII 928
Query: 852 GVLGHLNANSLFTRNNGSVTT----YKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-- 905
+ A S F +V++ + +++ ++Y I L +PL+ ++ + N L
Sbjct: 929 EAVSDKTAESSFAETVDTVSSEFANFYEYFYKKYNIVLKHPGQPLMLLKQSHNPHNLLVN 988
Query: 906 -------SKCRQQK-QKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
+K Q E + +PPEL ++ P+S+ S +PS+MHRL+SL+
Sbjct: 989 FNDEGVSAKASQAGVVNEKPRFHVHMPPELLLVLDVPVSV--LKSLYLLPSLMHRLESLM 1046
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
LA L+ ++ C N+ IP+ +LEA+TT +C E F +E LE LGDS LKYA S LF
Sbjct: 1047 LANQLREE-INFCSSNIDIPSSMILEALTTLRCCESFSMERLELLGDSVLKYAVSCHLFL 1105
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD--------- 1068
Y N HEG LS ++ + N+ L KLG + K+ G+IR +FDP+ W+ PG
Sbjct: 1106 RYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCK 1165
Query: 1069 -NSGSYELNDDSLFNGRKIYVT-------GRKKVKSKTVADVVEALIGAFLSTGGENVGL 1120
S E+ D F V G + + SKT++D VEALIGA+ +GG L
Sbjct: 1166 CGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWLCSKTISDCVEALIGAYYLSGGLVAAL 1225
Query: 1121 IFLDRIGIKVDF--------VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEAL 1172
+ +GI + +N R + + E + +ES + Y+F L EAL
Sbjct: 1226 HVMKWLGIDAELDPLVVAEVINQASLRTYVPNYE----IHMIESKVGYNFSVKFFLQEAL 1281
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
TH S L E CYQRLEFLGD+VLD LIT YLYN + + PG LTD+RSASVNN+ +A
Sbjct: 1282 THES--LHE-SYCYQRLEFLGDSVLDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQ 1338
Query: 1233 SSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGA 1292
+V+H LHKH+ H S L +I+ V SF + +T + PKALGD++ES+ GA
Sbjct: 1339 VAVRHDLHKHLQHCSTLLSNQISEYVQSFTESD--NTTRLDPSIKGPKALGDLVESIVGA 1396
Query: 1293 IFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKA 1352
I +D+ N + V++ + PLL P++TP+ + P REL E C + +K+ ++
Sbjct: 1397 ILIDTNLNLDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCKNKGEVVH 1456
Query: 1353 AVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
A + + L F D +K AK A +LK L
Sbjct: 1457 AELLLQLDHDLLVGEGF-DRSRKVAKGKAASCLLKDL 1492
>gi|242059623|ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/1451 (32%), Positives = 728/1451 (50%), Gaps = 188/1451 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF-VAVFLVPKVVLV 81
R YQL+ E A++QNTI L+TG+GKT+IA+ML++ + + + + + +FL P V LV
Sbjct: 33 RRYQLDVYEVAMRQNTIAMLDTGAGKTMIAVMLIKHFGKISKANNDRKLIIFLAPTVQLV 92
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ E IK +TD +V Y G GVD W +W+++ K++V+VMTPQ+LLD LR ++ L
Sbjct: 93 TQQCEVIKSYTDFEVEHYHGAKGVDQWKAHSWQQQFLKYQVMVMTPQVLLDALRQAFLIL 152
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+M+ ++I DECHHA G H Y IM EFYH G + P +FGMTASPI K SS+ D
Sbjct: 153 DMVSLMIFDECHHATGNHPYTRIMKEFYH-----GSEHKPNVFGMTASPIIRKGVSSDLD 207
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
++ +LE +++SK++ + +P + ++Y+ + + L++EL ++
Sbjct: 208 CENQLSELENILDSKIHAVVDREEIELCVPSAKEVNRYYEPRTVS---FEDLSEELEILC 264
Query: 262 LK--------HTRSLENL-DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
K H RS D +E E R+++SK + + YCL + G+ A +A +
Sbjct: 265 SKYDGLIVQLHNRSTNQYKDADEITKE-SRRRLSKSLAKICYCLEDAGLLCASEATKI-- 321
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG----AEWSI------------- 355
C E Q G+ K GSD + P+G AE S+
Sbjct: 322 CIERG-----QRKGW-----LKGGSDTTDQQSD--PNGPILFAEISMLHMKFFQEVLDII 369
Query: 356 ------GDDSKFNLDSGL--------LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAI 401
G D+ N +SG ++ K+ L+ L + +++RC+IFV+R I+A
Sbjct: 370 DKRLQQGIDALLNSESGCVEAAKMGYISPKLYELMRVFLSFSDSDNVRCLIFVDRKISAR 429
Query: 402 VLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
V++ + ++ C ++ ++ G +S + + K Q + ++ FR G VN++ T + EEG
Sbjct: 430 VIERTMKKIGRLSC-FRVSFLTGGSSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEG 488
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+ + C+ VI FD RT S++QSRGRAR ++S Y+LM++ G+ + + S M
Sbjct: 489 IHIPDCSCVIRFDLPRTTRSYVQSRGRARQRDSQYILMIEKGNVKQSDLISRIMRSKTSM 548
Query: 522 ------RKEVLSHASL-PCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD 574
R+ SH + P +N YH+ +TG T SS+S++ YC +LP D
Sbjct: 549 TEIASNREPEDSHRNFFPIEEINE-------YHISTTGAKITTDSSISVLNQYCDKLPKD 601
Query: 575 GYFKPTPKFHINK--EMGICTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIG 630
Y+ P P F + CT+ LP++ Q ++ N++ KQ CL+ACK+LHQ+G
Sbjct: 602 KYYTPRPTFQFTHYGDGYECTVTLPSSAMFQLLVGPKARNMQKAKQLVCLDACKRLHQLG 661
Query: 631 ALTDNLLPDI---VVEKHDAQKRGNEPYNAEHPIYFPPELVNQSP-----------QDTK 676
AL D+L P + +E ++ ++++ S Q K
Sbjct: 662 ALDDHLSPSVEETPLEISSKSSISTSGTTKRKELHGTTKVLSMSGSWGSDKSVTKLQGYK 721
Query: 677 ITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQ 736
+ + C ++ K + VL + T + E +N DL + + ++ G ++
Sbjct: 722 LNFVCDQVDQKYC--------DFVLLIDTSIAKEAATLNIDLYLHDKMVKASVSPCGPLE 773
Query: 737 LIPNQVLLCRRFQITLFRVIMDHNL--DKLNEILDGFELRD------NLEIDYLLLPSTG 788
L Q+ + FQ LF + K ++ F L+ N E YLLLP
Sbjct: 774 LDARQMEKTKLFQALLFNGLFGKLFIGSKASKTPREFILKKDDAFLWNKENMYLLLPVDS 833
Query: 789 Q-------LIDWKTV----ATVLFPRD--NGSKHNMNCSTMFNARIVHTKSGPLC----- 830
I+W V TV R + KHN+ ++ H K+
Sbjct: 834 TQDSHKSVCINWSIVDIAATTVGLMRSIYSDGKHNLK------DKLNHEKNDENFIRLAN 887
Query: 831 -TCK---IHNSLVCTPHNGQIYCITGVLGHLNANSLFT----RNNGSVTTYKKHYEERYG 882
+CK + N +V H G+IY + V L ANS F + T+ +++E++Y
Sbjct: 888 KSCKADDLKNMVVLAIHTGKIYTVLKV-SDLCANSKFDGTSDKKEAKFQTFAEYFEKKYN 946
Query: 883 IQLCFDREPLLNGRRIFHVQNYLS-KCRQQ-----------KQKEPSKISFELPPELCRI 930
I LC +PLL + + N LS K R + + K + +PPEL
Sbjct: 947 IFLCHPLQPLLVLKPTHNPHNLLSSKNRDEGIILFFVGNVVENKNRANSLVHMPPELLIP 1006
Query: 931 IMAPIS-LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKK 989
+ P+ L FY F PS+MHRL+SL+LA L++ + + I + +LEAITT +
Sbjct: 1007 LDLPVDVLRVFYLF---PSLMHRLESLMLASQLRSEI---AYTDSDISSFVILEAITTLR 1060
Query: 990 CQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKL 1049
C EDF +E LE LGDS LKYA S LF T+ N HEG LS +++ I NA L +LG E+++
Sbjct: 1061 CCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLGTERRI 1120
Query: 1050 PGFIRTESFDPKMWIIPGDNSGS-----------------YELNDDSLFNGRKIYVTGRK 1092
G+IR +FDP+ W+ PG S + ++D S+ G K G +
Sbjct: 1121 QGYIRDAAFDPRRWLAPGQLSSRPCPCECPVKSEVITEDIHRIDDKSIIIG-KACDKGHR 1179
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYQRQFQVHAERL 1148
+ SKT++D VEA+IGA+ GG L + I+ + + + ++
Sbjct: 1180 WICSKTISDCVEAIIGAYYVEGGLKAAFAVLKWLQIETLEEEQIMEALSSASVRNYLPKV 1239
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
V LE+ L Y+F+ LL+EALTH S CYQRLEFLGDAVLD LIT +L+
Sbjct: 1240 DVVEFLEAKLGYTFQVKGLLIEALTHPSQQESGATYCYQRLEFLGDAVLDILITRHLFLS 1299
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
+ G LTD+RSASVNN+ +A +VKH LH+ + H+S L +I V+S E S+
Sbjct: 1300 HKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYVNSLEGSSMDR 1359
Query: 1269 TFGWESVTSF-PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
T S S PK LGDI+ES+AGAI +DS + ++V++ +PLL P++TPE + P R
Sbjct: 1360 TSLLSSGPSRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFKPLLSPIVTPENLELPPFR 1419
Query: 1328 ELTEYCQKNHF 1338
EL E+C KN +
Sbjct: 1420 ELNEWCDKNGY 1430
>gi|255550219|ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
gi|223544646|gb|EEF46162.1| Ribonuclease III, putative [Ricinus communis]
Length = 1660
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/1468 (31%), Positives = 752/1468 (51%), Gaps = 135/1468 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFLVPKVVL 80
R+YQ++ E A+K+NTI LETG+GKT+IA+ML+R + K + F + +FL P V L
Sbjct: 63 RSYQVKVFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAI-KSNDFKKLIIFLAPTVHL 121
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ E IK +T+ KVG+Y+G G+D W W++E+++H+VLVMTPQILLD LR ++
Sbjct: 122 VNQQYEVIKDNTNFKVGEYYGAKGIDGWSMKVWEKEINEHDVLVMTPQILLDALRKAFLN 181
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
L M+ ++I+DECH G H IM EFYH+L SN P+IFGMTASP+ K SS
Sbjct: 182 LEMVSLMIIDECHRTTGNHPCTKIMKEFYHKL-----SNKPKIFGMTASPVVQKGVSSAV 236
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI 260
D +I +LET+++S++YT + + +P + KFY +I + + ++
Sbjct: 237 DCEDQISELETILDSQIYTIEDRTEMDVHVPSAREICKFY---DIAQLYSSDIKSKIEAS 293
Query: 261 ELKHTRSLENLDLN--------EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
K SL +L + + + + +++++ S +L CL ELG+ A +A +
Sbjct: 294 WSKFDASLLSLQGSIQSSYKDADDRYKTLQQRLYNDYSKILNCLEELGLICAYEAVKI-- 351
Query: 313 CYESDFFAWEQLDGFGETII--KKFGSDASQALVTYVPSGAEW--SIGDDSKFNLDSGLL 368
C E+ + D + E + K F + + TY+P G + +G D + +
Sbjct: 352 CLENS-PSTAAFDIYREISLKCKYFLEEVLSIIGTYLPHGDSYLLDLGFDYLKAVRLSYI 410
Query: 369 TEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
+ K+ L++ L + +++ C+IFV+R+ITA V++ + ++ + Y+ G+N+
Sbjct: 411 SPKLYELLQVFLSFGVDKEVLCLIFVDRIITAKVIERFVKKVAAL-VHFTVSYVTGSNTS 469
Query: 429 IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR 488
+ + K Q E + FR G VN++ +T +L EG+ V +C+ VI FD +TVC + QSRGR
Sbjct: 470 VDALTPKTQRETMYAFRSGKVNLLFSTDVLREGIHVPNCSCVICFDLPKTVCCYAQSRGR 529
Query: 489 ARMQNSDYLLMVKSGDSTTQSRL-----ENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
AR +S Y++M++ G+ + +L +L + + ++ C P
Sbjct: 530 ARQNDSQYIIMLQRGNVKQRDQLFDFIRSEWLVTNTAINRDPDVWTLKTCVPEET----- 584
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN--KEMGICTLYLPNNCP 601
+ Y V+ TG T SSV+LI YCS+LPSD YF P P F ++ C + LP +
Sbjct: 585 EAYIVDVTGASVTADSSVTLIQRYCSKLPSDRYFTPRPTFEFECFEQSFQCKMMLPASAA 644
Query: 602 IQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDI---VVEKHDAQKRGN---- 652
QT++ + + KQ ACLEACK+LHQ+GAL D+LLP + + H +++G+
Sbjct: 645 FQTIVGPVCRSQQLAKQLACLEACKQLHQMGALDDHLLPSVEEPTEDDHTVRRKGSLAGA 704
Query: 653 -----EPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR---NIVLAMR 704
+ + PI+ ++ T+H Y E F+ I + +L +
Sbjct: 705 GTTKRKELHGTTPIHALSGSWGENLDGA--TFHAYKFE----FSCSIVSEKYSGYILLIE 758
Query: 705 TELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDH--NLD 762
++L+ ++ + DL + R + ++ G++ L Q++ + F F + +
Sbjct: 759 SKLDDDVGNIELDLFLVRKTVRASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFSGS 818
Query: 763 KLNEILDGFELRDN------LEIDYLLLP--------STGQLIDWKTV----ATVLFPRD 804
K + F L+ L YLLLP I+W+ V V F +
Sbjct: 819 KSSRSPREFLLQKETSLLWILSNMYLLLPLEAFSASSDESWKINWRGVNGCSNVVEFLKK 878
Query: 805 N---GSKH------NMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLG 855
N G++H + + VH + + ++ + +V H G+IY + V+G
Sbjct: 879 NCFLGAEHYNGERVRSSVTECSGGNAVHFANISVDVERVKDMVVLAIHTGKIYSVVEVVG 938
Query: 856 HLNANSLFTRNNGSV----TTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQ 911
+A S F +N G +T+ +++ ++YGI L R+PLL ++ N L+ +
Sbjct: 939 DASAESPFEQNVGGAPSKFSTFSEYFNKKYGIVLLRPRQPLLLLKQSHKPHNLLNPPDED 998
Query: 912 KQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 966
K+ ++ + +PPEL I PI T S +PS+M+RL+SL+LA L+ +
Sbjct: 999 TLKDGLVVAKQRQFARMPPELLVSIDVPI--QTLKSSYLLPSLMYRLESLMLASQLRQEI 1056
Query: 967 LDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGL 1026
+ N IP++ +LEAITT + E +E LE LGDS LKY+ S LF Y HEG
Sbjct: 1057 ACQ-VSNFHIPSLLILEAITTPRSCEKVSMERLELLGDSVLKYSVSCDLFLRYPTKHEGQ 1115
Query: 1027 LSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSY----------ELN 1076
LS ++ R + N+ L +LG KL G+IR +F P+ W+ PG Y E+
Sbjct: 1116 LSAQRTRAVCNSTLHQLGIGCKLQGYIRDSAFIPRYWVAPGQQPAFYVSCTCGVDTLEVP 1175
Query: 1077 DDSLFNGRKIYVT-------GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 1129
D+ F V G + + SKT++D VEA+IGA+ +GG L + +G+
Sbjct: 1176 LDAKFQTEDPKVQIAICCSKGHRWMCSKTISDCVEAVIGAYYVSGGLMAALHVMQWLGMD 1235
Query: 1130 VDFVNVPYQRQFQVHAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 1184
V+F + + + R ++ +ES L Y+F LL EA+TH S I
Sbjct: 1236 VEFDPSLVDKIIKTASVRSYTPKEDEIKGIESKLGYTFSVKFLLQEAMTHASMQEQGIGY 1295
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
CYQRLEFLGD+VLD LIT +LY + + PG LTD+RSA V+N+ +A V+ L+KH+
Sbjct: 1296 CYQRLEFLGDSVLDLLITWHLYQNHTSMDPGELTDLRSACVSNENFAQVVVRRDLYKHLQ 1355
Query: 1245 HASHELYKRINITVDSF-EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
H S L +I ++SF E + G + PKALGD++ES+AGA+ +D+ N +
Sbjct: 1356 HCSTLLLSQIKEYLESFHESDEVAKATGPKG----PKALGDLLESIAGAMLIDAKLNLDE 1411
Query: 1304 VFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVE--VQAN 1361
V++ PLL P+ TP+ + P+REL + C + +K+ I+ V E +Q N
Sbjct: 1412 VWRIFMPLLSPLATPQNLELPPLRELMQLCNSLGYFIKEKC---INNNDIVHAELRLQLN 1468
Query: 1362 GRLFEHTFLDADKKTAKKVACKEVLKSL 1389
L D +K AK A +LK L
Sbjct: 1469 DVLLVGNGCDRSRKAAKGKAATHLLKKL 1496
>gi|115441737|ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:
Full=Dicer-like protein 3a; Short=OsDCL3a
gi|56785369|dbj|BAD82327.1| putative Endoribonuclease Dicer homolog [Oryza sativa Japonica Group]
gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa Japonica Group]
Length = 1651
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1472 (31%), Positives = 724/1472 (49%), Gaps = 130/1472 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-KPSPFVAVFLVPKVVLV 81
R YQL+ E A+++NTI L+TG+GKT+IA+ML++ + + R K + V +FL P V LV
Sbjct: 33 RRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPTVQLV 92
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ E I++HTD +V +Y+G GVD W G W+E++SK++V+VMTPQ+ L LR ++ L
Sbjct: 93 TQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRWQEQISKYQVMVMTPQVFLQALRNAFLIL 152
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+M+ ++I DECHHA G H Y IM EFYH+ + P +FGMTASP+ K SS D
Sbjct: 153 DMVSLMIFDECHHATGNHPYTRIMKEFYHK-----SEHKPSVFGMTASPVIRKGISSHLD 207
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI- 260
+ +LE L+++K+YT + + +P +AK YD P + L++EL ++
Sbjct: 208 CEGQFCELENLLDAKIYTVSDREEIEFCVP--SAKEMCRYYDSKP-VCFEDLSEELGVLC 264
Query: 261 --------ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
EL++ RS D ++ E ++++SK + + YCL ++G+ A +A + I
Sbjct: 265 SKYDALITELQNKRSDMYKDADDITKE-SKRRLSKSIAKICYCLDDVGLICASEATK-IC 322
Query: 313 CYESDFFAW---------EQLDGFGETIIK-------KFGSDASQALVTYVPSGAEWSIG 356
W +Q D G + KF +A + + G + +
Sbjct: 323 IERGQEKGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEEALHLIDKRLQQGIDMLLN 382
Query: 357 DDSKF--NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
+S +G ++ K+ LI+ + RC+IFV+R ITA V+ ++ + +
Sbjct: 383 SESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKK-IGHL 441
Query: 415 CTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
+ ++ G S + + K Q + ++ FR G VN++ T + EEG+ V C+ VI FD
Sbjct: 442 AHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFD 501
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
RT S++QSRGRAR ++S Y+LM++ G+ + + S M K S S S
Sbjct: 502 LPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLS 561
Query: 535 P--LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMG 590
P + N E YHV +TG T SS+S++Y YC +LP D + P P F + +
Sbjct: 562 PGFVPNEEINE--YHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGY 619
Query: 591 ICTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGALTDNL-------LPDIV 641
+CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+L +P+I
Sbjct: 620 VCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLCLSVEDPVPEI- 678
Query: 642 VEKHDAQKRGNEPYNAEH-PIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR--- 697
V K+ G H N + T + Y K +F D + +
Sbjct: 679 VSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KMNFVCDQAGQIYS 734
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
VL + L E+ + DL + + ++ G ++L Q+ + FQ LF +
Sbjct: 735 EFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQAKLFQGLLFNGLF 794
Query: 758 DH--NLDKLNEILDGFELRD------NLEIDYLLLPSTGQL-----IDWKTV----ATVL 800
K+ F L N YLLLP+ I+W + V
Sbjct: 795 GKLFTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSNVCINWSVIDAAATAVK 854
Query: 801 FPRDNGSKHNMNCSTMFNA-----RIVHTKSGPLCTCKIHNSLVCTPHNGQIYC---ITG 852
R S++ +F++ ++H + + + +V H G+IY IT
Sbjct: 855 LMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDITE 914
Query: 853 VLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK 912
+ G + + T+ ++++++YGI L +PLL + + N LS + +
Sbjct: 915 LSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDE 974
Query: 913 QKEPSKIS------------FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAV 960
+S +PPEL + P+ + SF P++M+R++SL LA
Sbjct: 975 GNVVENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEI--LRSFYLFPALMYRIESLTLAS 1032
Query: 961 NLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQ 1020
L++ + + I + +LEAITT +C EDF +E LE LGDS LKYA S LF +
Sbjct: 1033 QLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFP 1089
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS---------- 1070
N EG LS + +I NA L KLG E+ + G++R +FDP+ W+ PG S
Sbjct: 1090 NKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPV 1149
Query: 1071 GSYELNDDSLFNGRKIYVTGRKKVK------SKTVADVVEALIGAFLSTGGENVGLIFLD 1124
S + DD K V G+ K SKT+AD VEA+IGA+ + GG + L
Sbjct: 1150 KSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEAIIGAYYAGGGLRAAMAVLK 1209
Query: 1125 RIGIKVD-----FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
+GI + V Q + + LE+ L YSF LLVEALTH S
Sbjct: 1210 WLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQE 1269
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
CY+RLEFLGDAVLD L+T YL+N + + G LTD+RSASVNN+ +A +VKH
Sbjct: 1270 LGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNF 1329
Query: 1240 HKHILHASHELYKRINITVDSFEKLSLGST-FGWESVTSFPKALGDIIESLAGAIFVDSG 1298
H + H+S L +I V+ E S+ + + PK LGDI+ES+AGAI +D+
Sbjct: 1330 HHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDGLPKGPKVLGDIVESIAGAILLDTK 1389
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAV-TVE 1357
+ +VV+ PLL P++TPE + P REL E+C K+ + + + R G V T++
Sbjct: 1390 LDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKHGYFVG--INCRDQGDTVVATLD 1447
Query: 1358 VQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
VQ L +K AK A +LK L
Sbjct: 1448 VQLKEVLLVRQGFSKKRKDAKAHASSLLLKDL 1479
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 640 bits (1651), Expect = e-180, Method: Compositional matrix adjust.
Identities = 476/1455 (32%), Positives = 744/1455 (51%), Gaps = 112/1455 (7%)
Query: 9 DTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP 68
D + ++ D AR YQ+E + A+++N IV+L TG GKT IA+M++ +L+ P
Sbjct: 106 DPSSKMEKDPRKIARRYQVELCKKAMEENIIVYLGTGCGKTHIAVMVIYELGHLVLSPKK 165
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
V +FL P V LV QQA+ I + KV + G + + W+ E+S++EVLVMTPQ
Sbjct: 166 SVCIFLAPTVALVEQQAKVIADSVNFKVAVHCGGKRI-VKSHSEWEREISENEVLVMTPQ 224
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLPRIFGM 186
ILL L+ + ++ I +LI DECHHA+ + H YA IM FY ++ PRIFGM
Sbjct: 225 ILLHNLQHCFIRMECISLLIFDECHHAQQQSNHPYAEIMKVFY----KSESLQRPRIFGM 280
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TASP+ K S ++ + I+ LE L+++KVY+ S L F+ K +Y+ I
Sbjct: 281 TASPVVGKGSFQSENLSKSINSLENLLDAKVYSVESNVQLDGFVSSPIVKVYYYQ-SAIS 339
Query: 247 HALYTHLADELAMIELKHTRSLENL----DLNEAQAEL-IRKKVSKINSTLLYCLSELGV 301
A + + E M+E R L ++ D ++ Q L +++ + K + L+Y L LG+
Sbjct: 340 DASQSTIRYE-NMLEDIKQRCLTSIKLQIDTHQTQTLLNMKRLLKKTHDNLIYSLVNLGL 398
Query: 302 WLALKAAETISCYESDFFAWEQLDGFGET----IIKKFGSDASQALVTYVPSGAEWSIGD 357
W A++AA+ SD Q + GE I + S A++ L + V + E +
Sbjct: 399 WGAIQAAKIQ--LNSDV----QEEPVGENPKSKICDTYLSLAAEVLSSGV-AKDESASEL 451
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCT 416
S L L + K+V LIE L +R ++CIIFV R++TA L +L+ L L R +
Sbjct: 452 LSLAALKEPLFSRKLVQLIEILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLR--S 509
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
WK+ ++ G +SG++ SR+ I++ F+ +N++VAT + EEGLD+Q+C LVI +D
Sbjct: 510 WKSDFLVGLSSGLKSMSRRGMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLP 569
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPL 536
TV SFIQSRGRARM S+Y +V SG+ +EN+ + ++M +E+ S S P+
Sbjct: 570 ETVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFRVNEDRMNQEITSRTSEETCPI 629
Query: 537 NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN--KEMG--IC 592
E+ Y V TG + SS+SL+Y YCSRLP D +F+P P+F E G IC
Sbjct: 630 ----LDEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVNEFGGTIC 685
Query: 593 TLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQK- 649
+ LP N PI +++ + + K+ ACL+A +LH +G L D LLPD E D
Sbjct: 686 RITLPANAPISEIVSSLLPSTEAAKKDACLKAVYELHNLGVLNDFLLPDSKDEIEDELSD 745
Query: 650 --------RGNEPYNAEHPIYFPPELVNQSPQDTK--ITYHCYLIELKQHFNYDISARNI 699
+G E P L Q ++ + H Y I H D S +
Sbjct: 746 DEFDFDNIKGEGCSRGELYEMVVPVLFKQKWDSSRSCVNLHSYYIRFVPH-PADRSYKKF 804
Query: 700 VLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
M++ L E ++ DL + R ++V + G + +++ L FQ +V+ +
Sbjct: 805 GFFMKSPLPIEADTMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEVALKVLFE 864
Query: 759 HNLDKLNEILDGF---ELRDNLEID----YLLLPSTGQ------LIDWKTVATVLFPRDN 805
E++ F EL+D+ YLLLP + +DW T+ + L
Sbjct: 865 RG-----ELIPEFVPLELQDSSRTSKSTFYLLLPISLHDAESVISVDWVTIRSCL----- 914
Query: 806 GSKHNMNCSTMFNARIV-------HTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLN 858
S ++ IV + +G + NSLV HN Q Y + +
Sbjct: 915 -SSPIFKTPSVLVEDIVPPTGSYLNLANGCWNIDDVKNSLVFMTHNKQFYFVADIC--YG 971
Query: 859 ANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK 918
N S ++ ++ + YG++L + +PLL + + HV+N L R QK EP +
Sbjct: 972 RNGFSPVKESSTKSHMENIYKLYGVELKYPGQPLLRVKPLCHVRNLLHN-RMQKNLEPQE 1030
Query: 919 IS---FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 975
+ E+PPEL ++ + +S S + +PSIMHR+++LL+A+ LK+++ +
Sbjct: 1031 LDEYFIEIPPELSQLKIKGLSKEIGSSLSLLPSIMHRVENLLVAIELKHVMSASIPEIAE 1090
Query: 976 IPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERII 1035
+ +VLEA+TT+KC E LE LE LGD+FLK+A S+ LF + EG L+ ++ + +
Sbjct: 1091 VSGHRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDRLDEGELTRRRSKAV 1150
Query: 1036 SNAALCKLGCEQKLPGFIRTESFDPKMWIIPG-------DNSGSYELNDDSLFNG----- 1083
+N+ LC+L ++ L +IR ++ DP + G D S E++ + G
Sbjct: 1151 NNSNLCRLAIKRNLQVYIRDQALDPTQFFAFGHPCRVTCDEVTSEEVHSLNRVPGLLESN 1210
Query: 1084 RKIYVT-GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ---- 1138
+I + G + KT+ADVVEAL+GAFL G + FL IG+ VDF ++ Q
Sbjct: 1211 SEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLSWIGVNVDFESLQVQDACI 1270
Query: 1139 --RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 1196
R++ R N+ LE+ L+Y+F LLV+A H SY CYQRLEFLGDAV
Sbjct: 1271 ASRRYMPLTTR-NNLEALENQLDYNFLHKGLLVQAFIHPSYNR-HGGGCYQRLEFLGDAV 1328
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LDYL+T Y + +P L PG LTD+RS SVNN A +V L + + S L++ I
Sbjct: 1329 LDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNKALANVAVSFSLKRFLFCESVYLHEAIED 1388
Query: 1257 TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
+ L S G PK LGD++ES GA+F+D G N V+ + L+P+
Sbjct: 1389 YTNFRAASPLAS--GPSEGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVK 1446
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKT 1376
++ P++EL E CQ + ++ A++ G +V ++V G + +K+
Sbjct: 1447 NLSNLQISPIKELIELCQSYKWD-REISATKKDGGFSVELKVTKKGCCLTVSATGRNKRE 1505
Query: 1377 AKKVACKEVLKSLRA 1391
+ K A + ++ SL+A
Sbjct: 1506 STKKAAQLMITSLKA 1520
>gi|449489290|ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 466/1445 (32%), Positives = 725/1445 (50%), Gaps = 128/1445 (8%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
+EP + V+ +P R YQ+E E +++NTI L TGSGKT+IA+ML++
Sbjct: 20 LEPSVASDQSNFNVAEGFIP--RRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIG 77
Query: 61 YLLRKPS-PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK 119
++ S + +FL P V LV QQ IK HTD +V +Y+G MGVD W+ W++E S+
Sbjct: 78 KAMKSSSDKKLIIFLAPTVHLVHQQFNVIKDHTDFEVAEYYGAMGVDDWNMNCWEKETSE 137
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN 179
+VLVMTPQILLD LR +YF+L I ++I+DECH A G H Y IM EFYH+ DS
Sbjct: 138 RDVLVMTPQILLDALRKAYFRLGTICLMIIDECHRATGNHPYTKIMKEFYHK----SDSK 193
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF 239
P+ FGMTASP+ K SS D +I DLE++++++VY + + ++P + F
Sbjct: 194 -PKXFGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIEDKKEVEIYVPSAKEICIF 252
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLN--------EAQAELIRKKVSKINST 291
Y+ +P + L ++ + K SL N +++ + ++K++S +
Sbjct: 253 YE-PAMPQTM--ELKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLK 309
Query: 292 LLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETII--KKFGSDASQALVTYVPS 349
+ YCL ELG+ A +A + + +E+ E+ D + E+ + K F +A + +
Sbjct: 310 ITYCLDELGIMCAYEAIKVL--FENVSVPNEESDVYRESFLQYKHFLEEALLVIGESLSL 367
Query: 350 GAE--WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV-EDIRCIIFVERVITAIVLQSL 406
E ++G D ++ G ++ K+ L++ L E GV + C+IFVER+I A V++ +
Sbjct: 368 ENENVPTLGFDLWKAVELGYISPKLFELLQ-LFESFGVSRQVLCLIFVERIIAANVIERI 426
Query: 407 LSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
+ ++ + Y+ G ++ + + K Q E +E F G +N++ +T ++EEGL V +
Sbjct: 427 VKKV-ENLSHFTVSYVTGCDASVGALAPKVQKETLELFCHGKLNLLFSTDVVEEGLHVPN 485
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL 526
C+ V+ FD +TV S++QSRGRAR NS Y+L+++ G+ ++ L + + S M +
Sbjct: 486 CSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDRSMTDAAM 545
Query: 527 SHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN 586
S C + D Y VE+TG T SSV L+Y YC +LP D YF P P F ++
Sbjct: 546 SRDLDACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLS 605
Query: 587 KEMGI--CTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGALTDNLLP---- 638
G C L LP +QT++ N KQ CLEACKKLHQ+GAL D+LLP
Sbjct: 606 YGEGSYECQLTLPPTAALQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLPSVEE 665
Query: 639 ----DIVVEKHDAQKRGNEPYNAE-HPIYFPPELVNQ-SPQDTKITYHCYLIELKQHFNY 692
D+ ++ + + R E H L Q T+ Y + Y
Sbjct: 666 ISESDMGLKSNASTSRAGSTKRKELHGRTAIRALSGTWEEQVEGTTFQAYKFDFSCSVIY 725
Query: 693 DISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITL 752
++ + VL + ++L+ ++ +L + + ++ G + L Q+ + FQ
Sbjct: 726 EVYS-GFVLLIESKLDDDVSNFELELYLLSKMVKASVSFGGEVHLDAEQITKAKCFQELF 784
Query: 753 FR------VIMDHNLDKLNEIL-----DGFELRDNLEIDYLLLP------STGQL--IDW 793
F I K + L + + N+ YLLLP ST L I W
Sbjct: 785 FNGLFGRLFIGSKTTGKKRDFLLQKDTNPLWISSNM---YLLLPVDLPDDSTHDLWKIHW 841
Query: 794 KT----VATVLFPRDNGS-----------------KHNMNCSTMFN-ARIVHTKSGPLCT 831
+ V+ V F + N S N + T N A ++H + L
Sbjct: 842 RAIDSCVSVVEFLKKNSSLDAERNYGAGAISDSSPSRNNSTETGSNAASVIHFANCVLDV 901
Query: 832 CKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNG----SVTTYKKHYEERYGIQLCF 887
+ + +V H G+IY I V+ + +A S F N+ T+ ++ +RYGI L F
Sbjct: 902 HSLKDRVVLAIHTGRIYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSF 961
Query: 888 DREPLLNGRRIFHVQNYLSKCRQQK-QKEPSKISFE-------LPPELCRIIMAPISLST 939
++PLL ++ + N L + + K PS +F+ +PPEL ++ +
Sbjct: 962 PKQPLLRLKQSHNPHNLLVNFKDEGFDKLPSGPAFKRPQMHVHMPPEL--VLSMDVPKGV 1019
Query: 940 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESL 999
S +PS++HR +SL+LA L+ + H ++ I + +LEA+TT E+F LE L
Sbjct: 1020 LKSSYLLPSLIHRFESLMLASQLRKEINYHS-NSLGISSSLILEALTTLGSCENFSLERL 1078
Query: 1000 ETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD 1059
E LGDS LKYA S LF + HEG LS +++++I NA L LG + L G+IR +FD
Sbjct: 1079 ELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSAFD 1138
Query: 1060 PKMWIIPGD------------NSGSYELNDDSLFNGRKIYV-----TGRKKVKSKTVADV 1102
P+ W+ PG ++ L+D K+ + G + V SKT+AD
Sbjct: 1139 PRRWVAPGQCTNRPVPCKCGVDTVEVPLHDKFCTEDPKVVLGKCCDKGHRWVVSKTIADC 1198
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESL 1157
EALIGA+ GG L + +GI V+ V+ + + LES
Sbjct: 1199 AEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVDAITSASLRSCPLGDTEIATLESK 1258
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+ Y F LL+EA+TH S + CYQRLEFLGD+VLD LIT + Y Y + PG L
Sbjct: 1259 IGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGEL 1318
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF-EKLSLGSTFGWESVT 1276
TD+RSASVNN+ +A +V+ L +H+ H S L +I V E G
Sbjct: 1319 TDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSESQDTGKPLHG---N 1375
Query: 1277 SFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
PK LGD++ES+AGAI +D+ N + V++ +PLL P +TP+ + P+REL E C
Sbjct: 1376 KGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSL 1435
Query: 1337 HFSMK 1341
+ +K
Sbjct: 1436 GYFIK 1440
>gi|356509849|ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 1671
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 484/1497 (32%), Positives = 751/1497 (50%), Gaps = 149/1497 (9%)
Query: 2 EPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY 61
+P +S + E ++ P R YQ+E E A ++NTI L+TGSGKTLIA+ML++
Sbjct: 48 QPNDEDSPSLESPCSNMNP--RRYQIEVYEVARRRNTIAVLDTGSGKTLIAVMLMKEVGQ 105
Query: 62 LLRKPS-PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
++ + +FL P V LV QQ + IK TD +V +Y+G GVD W TW++E+S +
Sbjct: 106 AIKTSGVKKLIIFLAPTVHLVNQQFKNIKFLTDFQVEEYYGAKGVDTWTLKTWEKEISNN 165
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
+VLVMTPQILLD LR ++ ++ MI ++++DECH G H Y IM EFYH+ E
Sbjct: 166 DVLVMTPQILLDALRKAFLRMEMICLIVIDECHRTIGNHPYTKIMKEFYHQANEK----- 220
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
P+IFGMTASP+ K SS D +I +LE++++S+ YT + + +P +AK
Sbjct: 221 PKIFGMTASPVGKKGVSSTMDCEDQISELESILDSQRYTVEDRTEMDRCVP--SAKESCR 278
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLN----EAQAELIRKKVSKINSTLLYCL 296
YD+ + + L ++ + K L N E + + + +++S + +L+CL
Sbjct: 279 YYDQARFSALS-LKPKIEALSFKFDALLSENQSNYKDVENKFKTLSQRMSNELAKILHCL 337
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
+LG+ A +A + C+E +F E GE I + G + V E S+
Sbjct: 338 EDLGILCAYEAVKI--CHE-NFSKSE-----GECEIYRKGYLQCITFLEEVIKLIEESLH 389
Query: 357 DDSK------FNL----DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
K FN D G ++ K++ LI+ + + C+IFV+R+ITA V+Q
Sbjct: 390 LADKKILEVDFNYSQAEDLGYISPKLIELIKLFQSFGESSQVLCLIFVDRIITAKVIQR- 448
Query: 407 LSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
++ +P + Y+ GNN+ + + K+Q EI++ FR G VN++ T +LEEG+ V +
Sbjct: 449 FAKTVPNISHFTVSYLTGNNTSVDALAPKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPN 508
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL 526
C+ VI FD +TV S++QSRGR+R NS +++M++ G+ + +L + + S M +
Sbjct: 509 CSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMLERGNLKQRDQLFDIIRSERSMTDASI 568
Query: 527 SHASLPCSPLNNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH- 584
S L M G+ + Y+VESTG TL SSVSLI+ YC LP D Y P F
Sbjct: 569 YKEHE--SSLRACMVGKTNAYYVESTGASFTLDSSVSLIHRYCGTLPRDKYSCVKPNFEF 626
Query: 585 INKEMGI-CTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGALTDNLLPDIV 641
++ E G C L LP+N QT+I +++ K AC EACKKLHQ+GAL ++L+P I
Sbjct: 627 LSVEGGYQCKLILPSNSAFQTIIGPSGKDMRLAKHLACFEACKKLHQMGALNEHLVPLIE 686
Query: 642 VEKHDAQKRGNEPYNAEHPIYFPPELVNQS----------PQDTKITYHCYLIELKQHFN 691
D N+ ++ EL ++ + T++ ++ Y E +
Sbjct: 687 DSSEDDHIVKNKESSSGAGTTKRKELHGKANIHALSGAWGDKLTRVKFNAYKFEFTCNIV 746
Query: 692 YDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQIT 751
+I + L + +EL+ ++ VN DL + + ++ G++ L Q++ + F
Sbjct: 747 SEIYS-GFALLIESELDEDVGNVNLDLYLVSKIVKASVSSCGQVDLDAEQMMRAKCFHEL 805
Query: 752 LF-----RVIM--------------DHN-------------LDKLNEILDGFELRDNLEI 779
F R+++ D N L+KLN+I +G +L+I
Sbjct: 806 FFNGLFGRLVLKSKSAGEREFLLQKDTNSLWSPKHLYLLLPLEKLNDICEG-----SLQI 860
Query: 780 DYLLLPSTGQLI------------DWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSG 827
++ + S I D T+ P D S M C A +H +
Sbjct: 861 NWCGINSCASAIKFLRRKFSLVTGDCDDNGTITSPHDTSSSE-MEC---VGANKIHFANC 916
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNN---GSVTTYKKHYEERYGIQ 884
+ I + +V H G+IYCI + +L+A S F NN T+ ++ + YGI
Sbjct: 917 VVDADNIKDRVVLAIHTGKIYCIIEIDSNLSAESPFYGNNEKSKESITFSDYFSKSYGIS 976
Query: 885 LCFDREPLLNGRRIFHVQNYL---------SKCRQQKQKEPSKISFELPPELCRIIMAPI 935
L +P+L ++ + N L SK K P + +PPEL I+ +
Sbjct: 977 LRHPGQPMLRLKQSHNPHNLLFNFYEEDKSSKIGPAASKLP--VHVHIPPELLYIL--DV 1032
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S +PS+M+R++SL+L+ L+ +D I + +LE++TT +C E F
Sbjct: 1033 KRDVLKSLYLLPSLMYRIESLMLSSQLREE-IDGQTSKFNIRSSLILESLTTLRCSESFS 1091
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
+E LE LGDS LKY S LF Y HEG LS ++ + N+ L KLG ++KL G+IR
Sbjct: 1092 MERLELLGDSVLKYVVSCHLFLKYPKKHEGQLSARRSSAVCNSTLHKLGTDRKLQGYIRD 1151
Query: 1056 ESFDPKMWIIPGDNS----------GSYELNDDSLFNGRKIYVT-------GRKKVKSKT 1098
+F+P+ W+ PG S + E+ D+ F+ V G + SKT
Sbjct: 1152 SAFEPRRWVAPGQRSIHLVCCDCGLETLEVPLDAKFHTEDPKVVVGKFCDRGHCWMCSKT 1211
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV-----NVRH 1153
+AD VEALIGA+ GG L + +GI + + R +
Sbjct: 1212 IADCVEALIGAYYVDGGLFASLNVMKWLGIGAELELSLVDEAITAASLRTCLPKESEIAS 1271
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE + Y F LL+EA+TH S I CY+RLEFLGD+VLD LIT +LY + +
Sbjct: 1272 LEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYQSHTDID 1331
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LTD+RSASVNND +A +V+H LH+H+LH+S L +I+ V + +S
Sbjct: 1332 PGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLLSQISEYV---KVISESDPRSLP 1388
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
S+++ PKALGD++ES+ GAI +D+ + + V+ LL P++TP+ + P REL E C
Sbjct: 1389 SISA-PKALGDVVESIVGAILIDTKLSLDQVWNVFYSLLSPIVTPDKLELPPFRELNELC 1447
Query: 1334 QK-NHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
+F K ++ V V VQ L A+KKTAK A +LK L
Sbjct: 1448 DSLGYFVKVKENCEKVGSAMHVEVSVQLPNALLVREGKGANKKTAKGEAAFYLLKDL 1504
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 479/1453 (32%), Positives = 736/1453 (50%), Gaps = 105/1453 (7%)
Query: 9 DTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP 68
D + ++ D AR YQ+E + A ++N IV+L TG GKT IA+ML+ +L+ P
Sbjct: 111 DPSPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPKK 170
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
V +FL P V LV QQA+ I + KV + G + + W+ E++ +EVLVMTPQ
Sbjct: 171 SVCIFLAPTVALVEQQAKVIADSVNFKVAIHCGGKRI-VKSHSEWEREIAANEVLVMTPQ 229
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLPRIFGM 186
ILL L+ + K+ I +LI DECHHA+ + H YA IM FY ++ PRIFGM
Sbjct: 230 ILLHNLQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFY----KSESLQRPRIFGM 285
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TASP+ K S ++ + I+ LE L+N+KVY+ S L F+ K +Y+ +
Sbjct: 286 TASPVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYR-SALS 344
Query: 247 HALYTHLADELAMIELKHTRSLENL----DLNEAQAELIRKKVSK-INSTLLYCLSELGV 301
A + + E M+E R L +L D ++ Q L K++ K + L+Y L LG+
Sbjct: 345 DASQSTIRYE-NMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGL 403
Query: 302 WLALKAAETISCYESDFFAWEQLDGFG--ETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
W A++AA+ SD ++ G I + S A++AL + V + E + S
Sbjct: 404 WGAIQAAKIQ--LNSDHNVQDEPVGKNPKSKICDTYLSMAAEALSSGV-AKDENASDLLS 460
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWK 418
L L + K+V LI+ L +R ++CIIFV R++TA L +L+ L L R +WK
Sbjct: 461 LAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLR--SWK 518
Query: 419 TKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ ++ G +SG++ SR+ I++ F+ +N++VAT + EEGLD+Q+C LVI +D T
Sbjct: 519 SDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPET 578
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNN 538
V SFIQSRGRARM S+Y +V SG+ +EN+ + ++M E+ +S P
Sbjct: 579 VTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCP--- 635
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN--KEMG--ICTL 594
E+ Y V TG + SS+SL+Y YCSRLP D +F+P P+F E G IC +
Sbjct: 636 -RLDEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRI 694
Query: 595 YLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVE--------- 643
LP N PI + + + + K+ ACL+A +LH +G L D LLPD E
Sbjct: 695 TLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDE 754
Query: 644 ------KHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR 697
K + RG+ Y P+ F + P + + H Y I H D +
Sbjct: 755 FDFDNIKGEGCSRGDL-YEMRVPVLFKQKW---DPSTSCVNLHSYYIMFVPH-PADRIYK 809
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVI 756
M++ L E + ++ DL + R ++V + G + +++ L FQ +V+
Sbjct: 810 KFGFFMKSPLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVL 869
Query: 757 MDHNLDKLNEILDGF---ELRDNLEID----YLLLP---STGQLI---DWKTVATVLFPR 803
+ E++ F EL+D+ YLLLP G+ + DW T+ L
Sbjct: 870 FERG-----ELIPDFVPLELQDSSRTSKSTFYLLLPLCLHDGESVISVDWVTIRNCLSSP 924
Query: 804 DNGSKHNMNCSTMFNARIVHTKSGPLC--TCKIHNSLVCTPHNGQIYCITGVLGHLNANS 861
+ + +F H K C + NSLV T ++ Q Y + + N S
Sbjct: 925 IFKTPSVL-VEDIFPPSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFS 983
Query: 862 LFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS- 920
+ S ++ + + YG++L +PLL + + HV+N L R Q EP ++
Sbjct: 984 PVKES--STKSHVESIYKLYGVELKHPAQPLLRVKPLCHVRNLLHN-RMQTNLEPQELDE 1040
Query: 921 --FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 978
E+PPEL + + +S S + +PSIMHR+++LL+A+ LK++L + +
Sbjct: 1041 YFIEIPPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSG 1100
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+VLEA+TT+KC E LE LE LGD+FLK+A S+ LF + + EG L+ ++ +++N+
Sbjct: 1101 HRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNS 1160
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPG-------DNSGSYE---LNDD----SLFNGR 1084
LC+L ++ L +IR ++ DP + G D S E LN D G
Sbjct: 1161 NLCRLAIKKNLQVYIRDQALDPTQFFAFGHPCRVTCDEVASKEVHSLNRDLGILESNTGE 1220
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ------ 1138
G + KT+ADVVEAL+GAFL G + FL IG+ VDF ++ Q
Sbjct: 1221 IRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIAS 1280
Query: 1139 RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 1198
R++ R N+ LE+ L+Y F LLV+A H SY CYQRLEFLGDAVLD
Sbjct: 1281 RRYLPLTTR-NNLETLENQLDYKFLHKGLLVQAFIHPSYNR-HGGGCYQRLEFLGDAVLD 1338
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
YL+T Y + +P L PG LTD+RS SVNN+ A +V L + + S L++ I
Sbjct: 1339 YLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYT 1398
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+ L S G PK LGD++ES GA+F+D G N V+ + L+P+
Sbjct: 1399 NFLASSPLAS--GQSEGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNL 1456
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
++ P++EL E CQ + ++ A++ G V ++V NG + +K+
Sbjct: 1457 SNLQISPIKELIELCQSYKWD-REISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGT 1515
Query: 1379 KVACKEVLKSLRA 1391
K A + ++ +L+A
Sbjct: 1516 KKAAQLMITNLKA 1528
>gi|251764789|sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
Full=Dicer-like protein 3b; Short=OsDCL3b
Length = 1637
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 457/1421 (32%), Positives = 699/1421 (49%), Gaps = 131/1421 (9%)
Query: 15 SADTLPFARNYQL-EALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR--KPSPFVA 71
+ADT P R QL E E AL+ NTI L+TGSGKT++A+ML R +A +R + +
Sbjct: 33 TADTTP--RTSQLVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIV 90
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFL P V LV QQ E I+ +TDL V G V W WKEE+ ++E++VMTPQILL
Sbjct: 91 VFLAPTVHLVHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILL 150
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
D LR ++ ++ + +LI DECH A G H YA IM EFY G P +FGMTASP+
Sbjct: 151 DALRHAFLTMSAVSLLIFDECHRACGSHPYARIMKEFYF-----GSQWRPDVFGMTASPV 205
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-----KYDEIP 246
+K +S+ + I LE +++K+Y + L +F P +T K+Y +D +
Sbjct: 206 ATKGASTLHNCEAHISQLELTLDAKIYIVEDRNELESFSPPTTIVNKYYDAYMVDFDNLK 265
Query: 247 HALYTHLADELA--MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG---- 300
L +DE ++ L+ + S + D + E RK +S+ + +LY L++LG
Sbjct: 266 SKLQI-FSDEFDSLLVGLQESPSNKFKDTDNI-LETSRKSLSRYHGKILYSLNDLGPIIT 323
Query: 301 ---VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
V + +++ + + E F+ L + + +A + +P G +
Sbjct: 324 SEVVKIHIESVKPLCDSEDCIFSKASL-----CLHMSYFKEALSLIEEILPQGYGELMKS 378
Query: 358 DSKFN--LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+S G ++ K+ LI + ++ C+IFV+R+ITA ++ + ++ C
Sbjct: 379 ESGSEELTKRGYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSC 438
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ Y+ G ++ S Q ++ FR G VN++ T + EEG+DV +C+ VI FD
Sbjct: 439 -FSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDL 497
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL-SHASLPCS 534
RTVCS++QSRGRAR NS+++LM++ G+ Q + + +G ++ L H +
Sbjct: 498 PRTVCSYVQSRGRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSY 557
Query: 535 PLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--C 592
L+ + G Y V+STG T V+LI YC +LP D YF P P F + E G+ C
Sbjct: 558 DLS--IQGMYTYQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKC 615
Query: 593 TLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHD---- 646
TL LP N Q+++ + KQ LEACKKLHQ+G L D+L+P + E D
Sbjct: 616 TLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-LTEEPMDTDFT 674
Query: 647 ----------AQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISA 696
+ E + + ++ S T TY + ++ NY
Sbjct: 675 TADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENY---- 730
Query: 697 RNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRV 755
VL M EL+ ++ DL + ++ + G++QL Q+ + FQ F
Sbjct: 731 AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNG 790
Query: 756 IMD---HNLDKLNEILD-----GFELRDNLEIDYLLLP-------STGQLIDWKTVATV- 799
I H K D G E++ N E YLLLP I W+ + +
Sbjct: 791 IFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCA 850
Query: 800 -----LFPRDNGSKHNMNCSTMFNAR------IVHTKSGPLCTCKIHNSLVCTPHNGQIY 848
L+ G ++ + + + R I+H + L I +S+V + H G+IY
Sbjct: 851 GAVEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIY 910
Query: 849 CITGVLGHLNANSLFTR----NNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY 904
+ ++ A F T++ +Y ++YGI + +PLL ++ + N
Sbjct: 911 TVLDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNL 970
Query: 905 L-SKCRQQKQK-------EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
L SK + E +I +PPEL +I ++ SF +PS++HRLQSL
Sbjct: 971 LFSKLKYLDGSTGKPLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSL 1028
Query: 957 LLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
+LA L+ + N IP +LEAITT +C E F LE LE LGDS LKY LF
Sbjct: 1029 MLASQLRREI----GYNQHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLF 1084
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD-------- 1068
Y HEG LS + + + NA L K G + L G++R +FDP+ W+ PG
Sbjct: 1085 LRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPC 1144
Query: 1069 NSG----------SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENV 1118
N G Y +D S F G+ G + + SKT++D VEAL+GA+ GG
Sbjct: 1145 NCGIETAFVPSHRRYIRDDPSFFVGKPCD-RGHRWMCSKTISDCVEALVGAYYVGGGIAA 1203
Query: 1119 GLIFLDRIGIKVD-----FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALT 1173
L + GI + V + ++ ++ LE+ L Y+F LL+EA+T
Sbjct: 1204 ALWVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAIT 1263
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
H S + CYQRLEFLGD+VLD L+T +LY + + PG LTD+RSA V+N+ +A +
Sbjct: 1264 HPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQA 1323
Query: 1234 SVKHGLHKHILHASHELYKRINITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGA 1292
V++ +H H+ H S L ++I V S E S F + PK LGDI+ES+AGA
Sbjct: 1324 VVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGA 1383
Query: 1293 IFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
+F+D+ N ++V++ PLL P+ITP+ + P REL E C
Sbjct: 1384 VFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELC 1424
>gi|413933739|gb|AFW68290.1| hypothetical protein ZEAMMB73_539070 [Zea mays]
Length = 707
Score = 617 bits (1591), Expect = e-173, Method: Compositional matrix adjust.
Identities = 315/697 (45%), Positives = 461/697 (66%), Gaps = 20/697 (2%)
Query: 699 IVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
IVLA++ ++ S+ +F L + L+ ++++G I L QV+ RRFQ T+ +++
Sbjct: 15 IVLAVKCDMGSDFISNSFKLWGVQDYLSFTMRYVGIIHLNQEQVIAARRFQTTILSLLIS 74
Query: 759 HNLDKL-NEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSKHNM-NCSTM 816
++L ++ N I + E+ + YLLLP IDW+++ + +M +C
Sbjct: 75 NDLSEVSNYIKNLLEMPASPGAVYLLLPVVSGKIDWRSIKFSASEMPEATNMDMRHCYPC 134
Query: 817 FNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKH 876
+ IV TK G C+C + NS+VCTPHNG Y + G L LNANSL R++GS +YK +
Sbjct: 135 KDTGIVQTKDGTFCSCMLRNSIVCTPHNGMFYAVCGFLD-LNANSLLHRSDGSFLSYKTY 193
Query: 877 YEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPS-KISFELPPELCRIIMAPI 935
++ERY + L + + LL R++ V+N+L KC +K+KE S K ELPPELC ++M+P+
Sbjct: 194 FKERYNLDLRCEDQALLEARKLVEVRNFLHKCNYKKEKERSGKSVVELPPELCIVVMSPM 253
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S T SFTF+PSIM+R+Q +LL++NLK M L MQ IP +K+LEA+TTK CQE+F
Sbjct: 254 SAITLRSFTFIPSIMYRIQCMLLSMNLK-MQLGPSMQQFDIPALKILEALTTKNCQEEFS 312
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
ESLETLGDSFLKY +Q F Y++ HEG+L+ K+ +ISNAALC+L C L G+IR+
Sbjct: 313 QESLETLGDSFLKYITTQHFFVKYKHQHEGMLTKMKKNVISNAALCQLACSNNLVGYIRS 372
Query: 1056 ESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG 1115
E+F+PK WI+PG Y++ D SL +K+KSK +AD VEALIGA+LST G
Sbjct: 373 EAFNPKTWIVPG---VGYDICDRSL-----------RKLKSKRIADSVEALIGAYLSTAG 418
Query: 1116 ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHG 1175
E IFL +G+ ++F +P +R + AE +NV+ LE LL+YSF DPSLL+EALTHG
Sbjct: 419 EQAAYIFLKSLGMDIEFHKMPIERVITIKAEEFINVKSLELLLDYSFNDPSLLMEALTHG 478
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSV 1235
SY + CYQRLEFLGDAVLD++ T Y Y++YP +P LTD+RSASVNN CYA ++V
Sbjct: 479 SYQIAGTTPCYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAV 538
Query: 1236 KHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
K GLHKH+LH+S L+KR+ +D FE+ G + GWE+ S PK LGD++ES+AGAI++
Sbjct: 539 KAGLHKHVLHSSSALHKRMADYLDKFEQSFSGPSHGWEAGISLPKVLGDVVESIAGAIYI 598
Query: 1296 DSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVT 1355
D+ ++ VV++S++ +LEP++TP+T++ PV+EL E+C ++++ V +R +G ++V
Sbjct: 599 DAKHDKGVVWRSMKRILEPLVTPDTLQNDPVKELQEFCDSKGYTLEYTV-TRDNGVSSVV 657
Query: 1356 VEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
EV+ G ++ T K AKK+A VL+ L+A+
Sbjct: 658 AEVRTEGTTYKATRTGFSKLDAKKLAASSVLRDLKAA 694
>gi|414871005|tpg|DAA49562.1| TPA: hypothetical protein ZEAMMB73_299457 [Zea mays]
Length = 1440
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 458/1459 (31%), Positives = 714/1459 (48%), Gaps = 158/1459 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFLVPKVVL 80
R YQ+E AL+ NTI L+TGSGKT++AIML R + R + VFL P V L
Sbjct: 34 RGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLAREHVLRARAGEALRRIVVFLAPTVHL 93
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ E I+ +TDL + G GV W+ WKE + E++VMTPQILLD LR ++
Sbjct: 94 VHQQFEVIREYTDLDAVECHGASGVGHWNAKRWKEAIGTKEIVVMTPQILLDALRHAFLT 153
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKVSSSE 199
+ ++ +LI DECH A G H Y+ IM EFY DS P IFGMTASP+ K +S+
Sbjct: 154 MRVMSLLIFDECHRACGNHPYSLIMKEFYI------DSEWRPAIFGMTASPVSKKGASTI 207
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+D +I LE ++++KVY + L +F + K+Y P+
Sbjct: 208 EDCEAQIAQLELVLDAKVYIVEDRNELESFSTGAKVVNKYYD----PY------------ 251
Query: 260 IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL--SELGVWLALKAAETISCYESD 317
L +LD E++ +++ ++V KI + + + SE V+ +S ++
Sbjct: 252 --------LFDLDNLESKLQMLFEEVVKIYNESINTIDDSEDCVFSKESLNLQVSYFKEA 303
Query: 318 FFAWEQL--DGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCL 375
F E G+GE + + GS AE + G ++ K+ L
Sbjct: 304 LFLIEDFLPQGYGELMKSESGS-------------AELT---------KKGYISSKVESL 341
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I + E++ C+IFVER+ TA ++ + + + Y+ G ++ S
Sbjct: 342 INIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNV-NFSRFSISYLTGGSTSKDALSPA 400
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q ++ FR G VN++ T + EEG+DV +C+ VI FD RTVCS++QSRGRAR +S
Sbjct: 401 VQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSRGRARKSSSS 460
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
Y+LM++ G+ Q + + + ++ L H L+ + + YHVESTG
Sbjct: 461 YVLMIERGNLAQQEHIFRIIRTEYYVKTFAL-HKQPNTPSLDLPLQEKYIYHVESTGATI 519
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQTVIA--QGNI 611
T V+LIY YC +LP D Y+ P P F + + G CTL +P+N ++++ +
Sbjct: 520 TAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCTLTMPHNAAFRSIVGPPSSSC 579
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLP------DIVVEKHDAQKRGNEPYNAEHPIYFPP 665
KQ CLEACKKLH++G L D+L+P DI + D + ++
Sbjct: 580 NLAKQLVCLEACKKLHELGELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGTI 639
Query: 666 EL----VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVE 721
+ N + + + Y + + ++ A VL M + L+ ++ + DL +
Sbjct: 640 NVHGLSGNWIHESETVILNAYTFDFRCDQEGELYA-GFVLLMESVLDDDVARSEIDLFLI 698
Query: 722 RGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLF-----RVIMDHNLDKLNE---ILDGFE 772
++ + G+IQL Q+ + FQ F R+ D+L G E
Sbjct: 699 PNKMVYTTMTPCGKIQLNKEQLCKGKLFQEFFFNGIFGRLFHGSRTDELQREFIFTKGHE 758
Query: 773 LRDNLEIDYLLLP--STGQL-----IDWKTVATV---------LFPRDNGSKHNMNCSTM 816
++ + YLLLP ++ Q+ I W+ V + L+ D H CS
Sbjct: 759 IQWGSDNMYLLLPLRNSSQIQHDPNIYWEAVESCSGTVEQLRNLYLEDGNLNHENLCSHK 818
Query: 817 FNAR---IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR-NNGSVT- 871
+ + I+H + L + +S+V + H G+IY + ++ A+ F NG +
Sbjct: 819 RSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSFDEMYNGKASP 878
Query: 872 --TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-SKCRQQKQK-------EPSKISF 921
++ +Y ++YGI + +PLL ++ + N L SK + Q E +I
Sbjct: 879 FASFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHA 938
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IP 977
+PPEL +I ++ SF +PS+MHR+QSL+LA L++ N++ IP
Sbjct: 939 RVPPEL--LIHIDVATDILKSFYLLPSVMHRVQSLMLASQLRS--------NISYIQRIP 988
Query: 978 TIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISN 1037
+ +LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + N
Sbjct: 989 SSLILEAITTLRCCESFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCN 1048
Query: 1038 AALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS------------------GSYELNDDS 1079
A L K G Q L G+IR +FDP+ W+ PG S G Y ++DD
Sbjct: 1049 ATLHKHGIWQSLQGYIRDAAFDPRRWVAPGQISLRPFPCNCGIETAFVPFNGGY-ISDDP 1107
Query: 1080 LFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQ 1138
F K G + + SKTV+D VEAL+GA+ GG + + GI V + + +
Sbjct: 1108 SFVVGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQK 1167
Query: 1139 RQFQVHAERLV------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
++ +A R+ ++ LE+ L Y+F LL+EA++H S + CYQRLEFL
Sbjct: 1168 AKYNSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFL 1227
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GD+VLD LIT +LY + + PG LTD+RSASV+N+ +A + V++ +H H+ H S L +
Sbjct: 1228 GDSVLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLE 1287
Query: 1253 RINITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
++ V S E + F ++ PK LGDI+ES+ GAIF+D + ++V++ + PL
Sbjct: 1288 QVTEYVRSNLEYHGKENQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPL 1347
Query: 1312 LEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLD 1371
L PMITP+ + P REL E C ++ S + + ++VQ D
Sbjct: 1348 LSPMITPDKLALPPYRELLELCSHLGCFIESKCTSE-GEELIIEMKVQLRDEQLIAQGHD 1406
Query: 1372 ADKKTAKKVACKEVLKSLR 1390
+ KTAK A +L ++
Sbjct: 1407 RNGKTAKANAAARILVDMK 1425
>gi|414871006|tpg|DAA49563.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1517
Score = 611 bits (1575), Expect = e-171, Method: Compositional matrix adjust.
Identities = 458/1459 (31%), Positives = 714/1459 (48%), Gaps = 158/1459 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFLVPKVVL 80
R YQ+E AL+ NTI L+TGSGKT++AIML R + R + VFL P V L
Sbjct: 34 RGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLAREHVLRARAGEALRRIVVFLAPTVHL 93
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ E I+ +TDL + G GV W+ WKE + E++VMTPQILLD LR ++
Sbjct: 94 VHQQFEVIREYTDLDAVECHGASGVGHWNAKRWKEAIGTKEIVVMTPQILLDALRHAFLT 153
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKVSSSE 199
+ ++ +LI DECH A G H Y+ IM EFY DS P IFGMTASP+ K +S+
Sbjct: 154 MRVMSLLIFDECHRACGNHPYSLIMKEFYI------DSEWRPAIFGMTASPVSKKGASTI 207
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+D +I LE ++++KVY + L +F + K+Y P+
Sbjct: 208 EDCEAQIAQLELVLDAKVYIVEDRNELESFSTGAKVVNKYYD----PY------------ 251
Query: 260 IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL--SELGVWLALKAAETISCYESD 317
L +LD E++ +++ ++V KI + + + SE V+ +S ++
Sbjct: 252 --------LFDLDNLESKLQMLFEEVVKIYNESINTIDDSEDCVFSKESLNLQVSYFKEA 303
Query: 318 FFAWEQL--DGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCL 375
F E G+GE + + GS AE + G ++ K+ L
Sbjct: 304 LFLIEDFLPQGYGELMKSESGS-------------AELT---------KKGYISSKVESL 341
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I + E++ C+IFVER+ TA ++ + + + Y+ G ++ S
Sbjct: 342 INIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNV-NFSRFSISYLTGGSTSKDALSPA 400
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q ++ FR G VN++ T + EEG+DV +C+ VI FD RTVCS++QSRGRAR +S
Sbjct: 401 VQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSRGRARKSSSS 460
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
Y+LM++ G+ Q + + + ++ L H L+ + + YHVESTG
Sbjct: 461 YVLMIERGNLAQQEHIFRIIRTEYYVKTFAL-HKQPNTPSLDLPLQEKYIYHVESTGATI 519
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQTVIA--QGNI 611
T V+LIY YC +LP D Y+ P P F + + G CTL +P+N ++++ +
Sbjct: 520 TAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCTLTMPHNAAFRSIVGPPSSSC 579
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLP------DIVVEKHDAQKRGNEPYNAEHPIYFPP 665
KQ CLEACKKLH++G L D+L+P DI + D + ++
Sbjct: 580 NLAKQLVCLEACKKLHELGELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGTI 639
Query: 666 EL----VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVE 721
+ N + + + Y + + ++ A VL M + L+ ++ + DL +
Sbjct: 640 NVHGLSGNWIHESETVILNAYTFDFRCDQEGELYA-GFVLLMESVLDDDVARSEIDLFLI 698
Query: 722 RGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLF-----RVIMDHNLDKLNE---ILDGFE 772
++ + G+IQL Q+ + FQ F R+ D+L G E
Sbjct: 699 PNKMVYTTMTPCGKIQLNKEQLCKGKLFQEFFFNGIFGRLFHGSRTDELQREFIFTKGHE 758
Query: 773 LRDNLEIDYLLLP--STGQL-----IDWKTVATV---------LFPRDNGSKHNMNCSTM 816
++ + YLLLP ++ Q+ I W+ V + L+ D H CS
Sbjct: 759 IQWGSDNMYLLLPLRNSSQIQHDPNIYWEAVESCSGTVEQLRNLYLEDGNLNHENLCSHK 818
Query: 817 FNAR---IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR-NNGSVT- 871
+ + I+H + L + +S+V + H G+IY + ++ A+ F NG +
Sbjct: 819 RSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSFDEMYNGKASP 878
Query: 872 --TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-SKCRQQKQK-------EPSKISF 921
++ +Y ++YGI + +PLL ++ + N L SK + Q E +I
Sbjct: 879 FASFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHA 938
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IP 977
+PPEL +I ++ SF +PS+MHR+QSL+LA L++ N++ IP
Sbjct: 939 RVPPEL--LIHIDVATDILKSFYLLPSVMHRVQSLMLASQLRS--------NISYIQRIP 988
Query: 978 TIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISN 1037
+ +LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + N
Sbjct: 989 SSLILEAITTLRCCESFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCN 1048
Query: 1038 AALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS------------------GSYELNDDS 1079
A L K G Q L G+IR +FDP+ W+ PG S G Y ++DD
Sbjct: 1049 ATLHKHGIWQSLQGYIRDAAFDPRRWVAPGQISLRPFPCNCGIETAFVPFNGGY-ISDDP 1107
Query: 1080 LFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQ 1138
F K G + + SKTV+D VEAL+GA+ GG + + GI V + + +
Sbjct: 1108 SFVVGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQK 1167
Query: 1139 RQFQVHAERLV------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
++ +A R+ ++ LE+ L Y+F LL+EA++H S + CYQRLEFL
Sbjct: 1168 AKYNSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFL 1227
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GD+VLD LIT +LY + + PG LTD+RSASV+N+ +A + V++ +H H+ H S L +
Sbjct: 1228 GDSVLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLE 1287
Query: 1253 RINITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
++ V S E + F ++ PK LGDI+ES+ GAIF+D + ++V++ + PL
Sbjct: 1288 QVTEYVRSNLEYHGKENQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPL 1347
Query: 1312 LEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLD 1371
L PMITP+ + P REL E C ++ S + + ++VQ D
Sbjct: 1348 LSPMITPDKLALPPYRELLELCSHLGCFIESKCTSE-GEELIIEMKVQLRDEQLIAQGHD 1406
Query: 1372 ADKKTAKKVACKEVLKSLR 1390
+ KTAK A +L ++
Sbjct: 1407 RNGKTAKANAAARILVDMK 1425
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 455/1445 (31%), Positives = 724/1445 (50%), Gaps = 171/1445 (11%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQL+ + A+++N IV+L TG GKT IA++L+ +L+RKPS
Sbjct: 25 DPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSR-------- 76
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+QA I TD KV Y+G+ G + D W+ +M + E
Sbjct: 77 ------EQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFE--------------- 114
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
EFY+ PR+FGMTASPI K
Sbjct: 115 ------------------------------EFYN---SNSVEKFPRVFGMTASPIIGKGG 141
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-LYTHLAD 255
S++ +Y + I+ LE L+++KV + +E + S ++ + Y Y + H+ L T
Sbjct: 142 SNKLNYTKCINSLEELLHAKVCSVDNEELES---VVASPDMEVYFYGPVNHSNLTTICIK 198
Query: 256 ELAMIELKHTRSLEN--LDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
EL ++L+ R L D ++Q +L K + +++ +++CL ELG + AL+AA T
Sbjct: 199 ELDSLKLQSERMLRASLCDFKDSQKKL--KSLWRLHENIIFCLQELGSFGALQAARTFLS 256
Query: 314 YESDFFAWEQLDGFGET--IIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEK 371
++ D ++D G T + + A+ L G+ D K L+ + K
Sbjct: 257 FDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEK--LEEPFFSNK 314
Query: 372 IVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT--WKTKYIAGNNSGI 429
LI L Y E+++CI+FV+R+ A + ++L L C WK +++ G +SG
Sbjct: 315 FSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNL---KCLEFWKCEFLVGCHSGS 371
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ SR K + IV+ F G VN++VATS+ EEGLD+Q+C LV+ FD TV SFIQSRGRA
Sbjct: 372 KNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRA 431
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYG---EDFY 546
RM S Y+++++ + + + L Y+A + M +E+ S S N M+ E+ Y
Sbjct: 432 RMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTS-------NDMFDCLEENIY 484
Query: 547 HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMGI-CTLYLPNNCPIQT 604
V++TG + + SVSL++ YC LP D +F P+P F +I+ GI C L LP N +
Sbjct: 485 QVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQ 544
Query: 605 VIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE---- 658
Q + K+ ACL+AC KLH++GALTD LLP K+ N N
Sbjct: 545 ADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDS 604
Query: 659 -----HPIYFPPELVNQSPQDTKIT-------YHCYLIELKQHFNYDISARNIVLAMRTE 706
H + P L P K+ Y+ I + + Y + ++ + E
Sbjct: 605 LREELHEMLIPAVL---KPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVE 661
Query: 707 LESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQ------VLLCRRFQITLFRVIMDH 759
E+ + DL + RGR+ +KHLG+I + ++L +FQ ++++D
Sbjct: 662 AET----LQVDLHLARGRIVKAGIKHLGKIAFEKEKASSCSSMMLAHKFQEMCLKILLDR 717
Query: 760 NLDKLNEILDGFELRDNLEID---YLLLPSTGQ------LIDWKTV----ATVLFPRDNG 806
+ + G ++ LEI+ YLLLP + +IDW V ++ +F
Sbjct: 718 SEFTSPHVKLGNDV--TLEINSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPID 775
Query: 807 SKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRN 866
+ + S+ + R++ G + S+V +PHN + + G+L +NA ++ +
Sbjct: 776 VSVHASYSSNESLRLL---DGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA---WSEH 829
Query: 867 NGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL----SKCRQQKQKEPSKISFE 922
+G+ TY +H++ER+ I+L +PLL ++IF+++N L + + + +E + E
Sbjct: 830 SGA--TYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVE 887
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL 982
LPPELC + + S S + +PS+M+RL++LL+A+ LK+++L + I +L
Sbjct: 888 LPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGIL 947
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EA+TT+KC E LE E LGD+FLKY + F TY+ EG L+ ++ +++N+ L +
Sbjct: 948 EALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYE 1007
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSG------------SYELNDDSLFNGRKIYVTG 1090
L +KL +IR + F+P + PG +++ D+ N
Sbjct: 1008 LSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIHPDNRENCNLRCTRS 1067
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-- 1148
+ K +ADVVE+LIGAFL GG FL IGI VDF N R + L
Sbjct: 1068 HHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSL 1127
Query: 1149 ---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
++ LE L+ Y F+ LL++A H S+ CYQRLEFLGDAVL+Y+IT YL
Sbjct: 1128 MDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-QHSGGCYQRLEFLGDAVLEYVITSYL 1186
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
Y+ YP + PG +TD+RS +V ND A ++V+ +HKH++ S+ L I+ + + KLS
Sbjct: 1187 YSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAIS-KFEMYVKLS 1245
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHP 1325
E + PKALGDI+ES GA+ +DSG N V++ + LL+P++T M +P
Sbjct: 1246 NSEKDLLEE-PACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNP 1304
Query: 1326 VRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEV 1385
+REL E CQ + F + P + G+ V VEV ++ T + + K A+K A +E
Sbjct: 1305 MRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQET 1364
Query: 1386 LKSLR 1390
L L+
Sbjct: 1365 LSKLK 1369
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 467/1453 (32%), Positives = 724/1453 (49%), Gaps = 119/1453 (8%)
Query: 9 DTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP 68
D + ++ D AR YQ+E + A ++N IV+L TG GKT IA+ML+ +L+ P
Sbjct: 111 DPSPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPKK 170
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
V +FL P V LV QQA+ I + KV + G + + W+ E++ +E
Sbjct: 171 SVCIFLAPTVALVEQQAKVIADSVNFKVAIHCGGKRI-VKSHSEWEREIAANE------- 222
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLPRIFGM 186
+ K+ I +LI DECHHA+ + H YA IM FY ++ PRIFGM
Sbjct: 223 -------HCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFY----KSESLQRPRIFGM 271
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TASP+ K S ++ + I+ LE L+N+KVY+ S L F+ K +Y+ +
Sbjct: 272 TASPVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYR-SALS 330
Query: 247 HALYTHLADELAMIELKHTRSLENL----DLNEAQAELIRKKV-SKINSTLLYCLSELGV 301
A + + E M+E R L +L D ++ Q L K++ + + L+Y L LG+
Sbjct: 331 DASQSTIRYE-NMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGL 389
Query: 302 WLALKAAETISCYESDFFAWEQLDGFG--ETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
W A++AA+ SD ++ G I + S A++AL + V + E + S
Sbjct: 390 WGAIQAAKIQ--LNSDHNVQDEPVGKNPKSKICDTYLSMAAEALSSGV-AKDENASDLLS 446
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWK 418
L L + K+V LI+ L +R ++CIIFV R++TA L +L+ L L R +WK
Sbjct: 447 LAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLR--SWK 504
Query: 419 TKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ ++ G +SG++ SR+ I++ F+ +N++VAT + EEGLD+Q+C LVI +D T
Sbjct: 505 SDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPET 564
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNN 538
V SFIQSRGRARM S+Y +V SG+ +EN+ + ++M E+ +S P
Sbjct: 565 VTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCP--- 621
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN--KEMG--ICTL 594
E+ Y V TG + SS+SL+Y YCSRLP D +F+P P+F E G IC +
Sbjct: 622 -RLDEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRI 680
Query: 595 YLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVE--------- 643
LP N PI + + + + K+ ACL+A +LH +G L D LLPD E
Sbjct: 681 TLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDE 740
Query: 644 ------KHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR 697
K + RG+ Y P+ F + P + + H Y I H D +
Sbjct: 741 FDFDNIKGEGCSRGDL-YEMRVPVLFKQKW---DPSTSCVNLHSYYIMFVPH-PADRIYK 795
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVI 756
M++ L E + ++ DL + R ++V + G + +++ L FQ +V+
Sbjct: 796 KFGFFMKSPLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVL 855
Query: 757 MDHNLDKLNEILDGF---ELRDNLEID----YLLLP---STGQLI---DWKTVATVLFPR 803
+ E++ F EL+D+ YLLLP G+ + DW T+ L
Sbjct: 856 FERG-----ELIPDFVPLELQDSSRTSKSTFYLLLPLCLHDGESVISVDWVTIRNCLSSP 910
Query: 804 DNGSKHNMNCSTMFNARIVHTKSGPLC--TCKIHNSLVCTPHNGQIYCITGVLGHLNANS 861
+ + +F H K C + NSLV T ++ Q Y + + N S
Sbjct: 911 IFKTPSVL-VEDIFPPSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFS 969
Query: 862 LFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS- 920
+ S ++ + + YG++L +PLL + + HV+N L R Q EP ++
Sbjct: 970 PVKES--STKSHVESIYKLYGVELKHPAQPLLRVKPLCHVRNLLHN-RMQTNLEPQELDE 1026
Query: 921 --FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 978
E+PPEL + + +S S + +PSIMHR+++LL+A+ LK++L + +
Sbjct: 1027 YFIEIPPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSG 1086
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+VLEA+TT+KC E LE LE LGD+FLK+A S+ LF + + EG L+ ++ +++N+
Sbjct: 1087 HRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNS 1146
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPG-------DNSGSYE---LNDD----SLFNGR 1084
LC+L ++ L +IR ++ DP + G D S E LN D G
Sbjct: 1147 NLCRLAIKKNLQVYIRDQALDPTQFFAFGHPCRVTCDEVASKEVHSLNRDLGILESNTGE 1206
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ------ 1138
G + KT+ADVVEAL+GAFL G + FL IG+ VDF ++ Q
Sbjct: 1207 IRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIAS 1266
Query: 1139 RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 1198
R++ R N+ LE+ L+Y F LLV+A H SY CYQRLEFLGDAVLD
Sbjct: 1267 RRYLPLTTR-NNLETLENQLDYKFLHKGLLVQAFIHPSYNR-HGGGCYQRLEFLGDAVLD 1324
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
YL+T Y + +P L PG LTD+RS SVNN+ A +V L + + S L++ I
Sbjct: 1325 YLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYT 1384
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+ L S G PK LGD++ES GA+F+D G N V+ + L+P+
Sbjct: 1385 NFLASSPLAS--GQSEGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNL 1442
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
++ P++EL E CQ + ++ A++ G V ++V NG + +K+
Sbjct: 1443 SNLQISPIKELIELCQSYKWD-REISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGT 1501
Query: 1379 KVACKEVLKSLRA 1391
K A + ++ +L+A
Sbjct: 1502 KKAAQLMITNLKA 1514
>gi|242039323|ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
gi|241920910|gb|EER94054.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
Length = 1586
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 460/1455 (31%), Positives = 706/1455 (48%), Gaps = 150/1455 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR--KPSPFVAVFLVPKVVL 80
R YQ+E AL+ NTI L+TGSGKT++AIML R + R + + VFL P V L
Sbjct: 27 RGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLAREHVLRARAGETPRRIVVFLAPTVHL 86
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ E I+ +TDL + G GV W+ WKE + E++VMTPQILLD LR ++
Sbjct: 87 VHQQFEVIREYTDLDAVECHGASGVGDWNAKRWKEAIGSKEIVVMTPQILLDALRHAFLT 146
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKVSSSE 199
+ ++ +LI DECH A G H Y+ IM EFY DS P IFGMTASP+ + +S+
Sbjct: 147 MCVMSLLIFDECHRACGNHPYSRIMKEFYI------DSEWRPAIFGMTASPVSKRGASTI 200
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+D +I LE ++N+KVY + L +F + K+Y P+
Sbjct: 201 EDCEAQIAQLELVLNAKVYIVEDRNELESFSTGAKIVNKYYD----PY------------ 244
Query: 260 IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET--ISCYESD 317
L +LD E++ +++ ++V KI + + + + L KA+ +S ++
Sbjct: 245 --------LFDLDDLESKLQMLFEEVVKIYNESINTVGDSEDCLFSKASLNLQVSYFKEA 296
Query: 318 FFAWEQL--DGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCL 375
F E+ G+GE + + GS AE + G ++ K+ L
Sbjct: 297 LFLIEEFLPQGYGELMKSESGS-------------AELT---------KRGYVSSKVQTL 334
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I + E++ C+IFVER++TA ++ + + + Y+ G ++ S
Sbjct: 335 INIFKSFGSSEEVLCMIFVERIMTAKAVERFMRGNV-NFSRFSISYLTGGSTSKDSLSPA 393
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q ++ FR G VN++ T + EEG+DV +C+ VI FD RTVCS++QSRGRAR +S
Sbjct: 394 VQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSRGRARRSSSS 453
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
Y+LM++ G+ Q + + + ++ L H L+ + + YHVESTG
Sbjct: 454 YVLMIERGNLVQQEHIFRIIRTEYYVKTFAL-HKQPNTPSLDLPLQEKYMYHVESTGATI 512
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQTVIA--QGNI 611
T V+LIY YC +LP D Y+ P P F + + G C L +P N ++++
Sbjct: 513 TAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCALTMPPNAAFRSIVGPPSSTC 572
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLP------DIVVEKHDAQ---KRGNEPYNAEHPIY 662
KQ CLEACKKLH++G L D+L+P DI + D + G H I
Sbjct: 573 NLAKQLVCLEACKKLHELGELDDHLVPLTEEPMDIDTDTTDKKCVSGPGTTKRKELHGII 632
Query: 663 FPPELV-NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVE 721
L N + + + Y + + + A VL M + L+ ++ DL +
Sbjct: 633 NVHGLSGNWIHESETVILNSYTFDFRCDQEGETFA-GFVLLMESVLDDDVAHSEIDLFLI 691
Query: 722 RGRLTVN-LKHLGRIQLIPNQVLLCRRFQITLFRVIMDH--NLDKLNEILDGFELRDNLE 778
++ + G+IQL Q+ + FQ F I + + + + F R E
Sbjct: 692 PNKMVYTAITPCGKIQLNKEQLRKGKLFQEFFFNGIFGRLFHGSRTSGLQREFIFRKGHE 751
Query: 779 ID------YLLLPSTGQL-------IDWKTVATV---------LFPRDNGSKHNMNCSTM 816
I YLLLP I W+ V + L+ D H CS
Sbjct: 752 IQWGSDNMYLLLPLRNSSHIQHDLNIYWEAVESCSGAVEQLRNLYLEDGNLNHENLCSHK 811
Query: 817 FNAR---IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRN-NGSV-- 870
+ + I+H + L + +S+V + H G+IY + ++ A+ F NG
Sbjct: 812 RSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDTTADDSFDEMYNGKASP 871
Query: 871 -TTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-SKCRQQKQK-------EPSKISF 921
+++ +Y ++YGI + +PLL ++ + N L SK + Q E +I
Sbjct: 872 FSSFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHA 931
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
+PPEL +I ++ SF +PS+MHR+QSL+LA L+ + IP+ +
Sbjct: 932 RVPPEL--LIHIDVTTDILKSFYLLPSVMHRVQSLMLASQLRRDI----SYTQRIPSSLI 985
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA L
Sbjct: 986 LEAITTLRCCETFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLH 1045
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNS------------------GSYELNDDSLFNG 1083
K G + L G+IR +FDP+ W+ PG S G Y ++DD F
Sbjct: 1046 KHGICRSLQGYIRDTAFDPRRWVAPGQISLRPFPCNCGIETAFVPFTGEY-ISDDPSFIV 1104
Query: 1084 RKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQ 1142
K G + + SKTV+D VEAL+GA+ GG + + GI V + + + ++
Sbjct: 1105 GKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGITAAIWVMRWFGIDVRCDMELVQKAKYN 1164
Query: 1143 VHAERLVNV------RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 1196
+A +L + LE+ L Y+F LL+EA++H S + CYQRLEFLGD+V
Sbjct: 1165 SNASQLCYLSKLKVFEELEAKLKYNFSVKGLLLEAVSHPSLQELGVDYCYQRLEFLGDSV 1224
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LD LIT +LY + + PG LTD+RSA V+N+ +A + V++ +H H+ H S L +++
Sbjct: 1225 LDLLITQHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQVTE 1284
Query: 1257 TV-DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
V S E + F ++ PK LGDI+ES+ GAIF+D N ++V++ + PLL PM
Sbjct: 1285 YVRSSLEYHGKENEFVQQATFKAPKVLGDIMESITGAIFIDVNFNVDLVWKIVEPLLSPM 1344
Query: 1316 ITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKK 1375
ITP+ + P REL E C +K S+ + + + VQ L D ++K
Sbjct: 1345 ITPDKLALPPYRELLELCSHLGCFIKSKCTSK-GEELIIEMTVQLRDELLIAQGHDRNRK 1403
Query: 1376 TAKKVACKEVLKSLR 1390
+AK A +L L+
Sbjct: 1404 SAKAKAAARILVDLK 1418
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 561 bits (1445), Expect = e-156, Method: Compositional matrix adjust.
Identities = 441/1466 (30%), Positives = 712/1466 (48%), Gaps = 176/1466 (12%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
++ D AR YQLE + AL++N IV+L TG GKT IA++L+ +L+R+P
Sbjct: 39 QKTEKDPRKMARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYEMGHLIRQPQKSAC 98
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFL P V LV QQA+ I+ TD KVG Y G ++W++E+ ++EVLVMTPQILL
Sbjct: 99 VFLAPTVALVHQQAKVIEDSTDFKVGIYCGKSN-RLKTHSSWEKEIEQNEVLVMTPQILL 157
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L S+ K+++I +LI DECHHA+ K H YA IM FY + D LPRIFGMTAS
Sbjct: 158 YNLSHSFIKMDLIALLIFDECHHAQVKSGHPYAQIMKVFY----KNNDGKLPRIFGMTAS 213
Query: 190 PI------KSKVSSSE--------QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA 235
P+ + +V+S E ++ + I+ LE L+++KVY+ + L F+ ++
Sbjct: 214 PVVGKEKYRERVTSLEILLHHLIRENLPRSINSLENLLDAKVYSVEDKEELECFV--ASP 271
Query: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSL----ENLDLNEAQAEL--IRKKVSKIN 289
+ Y Y + + + ++E + + + D N++ L ++ + +++
Sbjct: 272 VIRVYLYGPVANGTSSSYEAYYNILEGVKRQCIVEIGKKTDGNQSLESLRSTKRMLIRMH 331
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQL-------------DGFGETIIKKFG 336
+++CL LG+W AL+A + D W L D + F
Sbjct: 332 ENIIFCLENLGLWGALQACRIL--LSGDHSEWNALIEAEGNTSDVSMCDRYLNQATNVFA 389
Query: 337 SDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVER 396
+D ++ VT S E L + K++ LIE L +R D++CI+FV R
Sbjct: 390 ADCTRDGVTSNVSQVEV---------LKEPFFSRKLLRLIEILSNFRLQPDMKCIVFVNR 440
Query: 397 VITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATS 456
++TA L +L L +WK ++ G +SG++ SRK N I+E FR G +N+++AT
Sbjct: 441 IVTARSLSHILQNL-KFLTSWKCDFLVGVHSGLKSMSRKTMNVILERFRTGKLNLLLATK 499
Query: 457 ILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLA 516
+ EEGLD+Q+C LVI FD TV SFIQSRGRARM S+Y+ +V SG+ + +E +
Sbjct: 500 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYVFLVDSGNQKERDLIEKFKI 559
Query: 517 SGNKMRKEVLSHASLPCSPLNNHMYG---EDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
+M E+ C + + E Y V +TG T S+SL+ YCS+LP
Sbjct: 560 DEARMNIEI-------CDRTSRETFDSIEEKIYKVHATGASITSGLSISLLQQYCSKLPH 612
Query: 574 DGYFKPTPKFHI--NKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQI 629
D YF P PKF + E +C + LP+N P ++ Q +I+ K+ ACL+A ++LH++
Sbjct: 613 DEYFDPKPKFFYFDDSEGTVCHIILPSNAPTHKIVGTPQSSIEVAKKDACLKAIEQLHKL 672
Query: 630 GALTDNLLP------DIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH--C 681
GAL++ LLP ++ + D+ ++ E P ++ +S + + H
Sbjct: 673 GALSEFLLPQQEDTNELELVSSDSDNCEDKDSRGELREMLVPAVLKESWTELEKPIHLNS 732
Query: 682 YLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPN 740
Y IE D + L ++ L E K++ +L + RGR + L G + +
Sbjct: 733 YYIEFCP-VPEDRIYKQFGLFLKAPLPLEADKMSLELHLARGRSVMTKLVPSGLSKFSTD 791
Query: 741 QVLLCRRFQITLFRVIMDHNLDKLNEI--LDGFELRDNLEIDYLLLPSTGQL------ID 792
++ FQ + I+D + + ++E L L + YLLLP + +D
Sbjct: 792 EITHATNFQELFLKAILDRS-EFVHEYVPLGKDALSKSCPTFYLLLPVIFHVSERRVTVD 850
Query: 793 WKTVATVL-FPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCIT 851
W+ + L P + ++ + + + +G + NSLV TPH + Y IT
Sbjct: 851 WEIIRRCLSSPVFKNPANAVDKGILPSNDCLQLANGCSSIRDVENSLVYTPHQKKFYFIT 910
Query: 852 GVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQ 911
++ N +S +N ++K H L+ Q
Sbjct: 911 NIVPEKNGDSPCKGSN--TRSHKDH----------------------------LTTTELQ 940
Query: 912 KQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 971
+ E +L PELC + + S S + +PS+MHRL++LL+A+ LK +L
Sbjct: 941 ELDEH---FVDLAPELCELKIIGFSKDIGSSISLLPSVMHRLENLLVAIELKCILSASFS 997
Query: 972 QNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKK 1031
+ + +VLEA+TT+KCQE LE LETLGD+FLK+A + F + EG L+ K+
Sbjct: 998 EGDKVTAHRVLEALTTEKCQERLSLERLETLGDAFLKFAVGRHFFLLHDTLDEGELTRKR 1057
Query: 1032 ERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSY--ELNDDSLFNGRKIYVT 1089
SNA FIR + FDP + G + ++ ++ + +VT
Sbjct: 1058 ----SNAV------------FIRDQPFDPYQFFALGHPCPRICTKESEGTIHSQCGSHVT 1101
Query: 1090 GRKK------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF----- 1132
G+ K + +KTV+DVVEALIGAFL G + FL IGIKVDF
Sbjct: 1102 GQAKGSEVRCSKGHHWLHNKTVSDVVEALIGAFLVDSGFKAAIAFLRWIGIKVDFDDSQV 1161
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
+N+ + +++ LE+LL + F LL++A H S+ EF
Sbjct: 1162 INICQASRTYAMLNPSMDLATLENLLGHQFLYKGLLLQAFVHPSHK--------NGGEF- 1212
Query: 1193 GDAVLDYLITVYLYNK--------YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
G +L + +T+ + YP + PG+LTD+RS VNN +A +V H++++
Sbjct: 1213 GVMILQFAMTLMFPPEIGVPWRCFYPKMKPGHLTDLRSVLVNNRAFASVAVDRSFHEYLI 1272
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
S L VD F + E PK LGD++ES GAI +D+G + +
Sbjct: 1273 CDSDALSAATKKFVD-FVRTPKSERRLLEG-PKCPKVLGDLVESSVGAILLDTGFDLNHI 1330
Query: 1305 FQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRL 1364
++ + L+P+ + ++ +PVREL E CQ +++ + P AS+ +V V +
Sbjct: 1331 WKIMLSFLDPISSFSNLQINPVRELKELCQSHNWDFEVP-ASKKGRTFSVDVTLSGKDMN 1389
Query: 1365 FEHTFLDADKKTAKKVACKEVLKSLR 1390
+ +++KK A ++A +++ L+
Sbjct: 1390 ISASASNSNKKEAIRMASEKIYARLK 1415
>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
Length = 1492
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 443/1473 (30%), Positives = 687/1473 (46%), Gaps = 218/1473 (14%)
Query: 25 YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY-LLRKPSPFVAVFLVPKVVLVPQ 83
YQ + E A+K+NTI LETG+GKT+IA+ML++ + + +FL P V LV
Sbjct: 1 YQSKVFEVAVKRNTIAVLETGAGKTMIAVMLIKQIGQAVFYSGVKRLILFLAPTVHLV-N 59
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
QA IK T+ +VG+Y+G G+D W +W++E+ +H+VLVMTPQILLD LR ++ L M
Sbjct: 60 QACFIKSQTNFRVGEYYGAKGIDEWSLKSWEKEIDEHDVLVMTPQILLDALRKAFLNLKM 119
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYW 203
+ +LILDECH + G H Y IM
Sbjct: 120 VSLLILDECHRSTGNHPYKKIM-------------------------------------- 141
Query: 204 QKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL------ 257
K+YT + + ++P + +FY + Y L D++
Sbjct: 142 ------------KIYTIEDRAEVHVYVPSAKELCRFY---DKAWCSYVELKDKIEASWSK 186
Query: 258 ---AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
+M+ L+ + D+++ + + RK++SK ++ +L CL +LG+ A +A + C
Sbjct: 187 FDASMLALQGSTQSCYKDMDD-KLKATRKQLSKDHAKILNCLEDLGLICAYEAIKV--CL 243
Query: 315 ESDFFAWEQLDGFGETII--KKFGSDASQALVTYVPSGAEWSI--GDDSKFNLDSGLLTE 370
E+ + + E + + F D + + G +S+ G D L G ++
Sbjct: 244 ENAGNPTGECKLYQEISLQCRYFLEDVLHIIGESLLHGDNFSLDHGFDCSAALGFGYISP 303
Query: 371 KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSGI 429
K+ L++ L + ++ C+IFVER+ITA V++ + ++ + H T Y+ G N+
Sbjct: 304 KLHELLQLFLSFGEAREVLCLIFVERIITAKVVERFMKKVEVLAHFT--VSYLTGTNASA 361
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ K Q E +E FR G VN++ AT ++EEG+ V +C+ VI FD +TV S++QSRGRA
Sbjct: 362 DALAPKMQMETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRA 421
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
R NS ++ M++ G++ + +L + S M ++ + Y V+
Sbjct: 422 RQNNSHFITMLERGNTKQRDQLFEIIRSEWSMTDTAINRDPNVWNLKACASEAAKAYVVD 481
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQG 609
TG T SS LP N QT++
Sbjct: 482 VTGASVTADSS-----------------------------------LPPNAAFQTLVGPT 506
Query: 610 --NIKTLKQAACLEACKKLHQIGALTDNLLPDI--------VVEKHDAQKRGNEPYNAEH 659
N + KQ CLEACKKLHQ+GAL D+LLP + V K + G H
Sbjct: 507 CRNQQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSEIAVVKSKSTSAGAGTTKRKELH 566
Query: 660 PIYFPPELVNQSPQDTK-ITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDL 718
L + T+H Y + I + +L + ++L+ ++ + DL
Sbjct: 567 GTACIHALSGSWGEKLDGATFHAYKFDFSCSIVSQIYS-GFILLIESKLDDDVGNIELDL 625
Query: 719 EVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLE 778
+ + ++ G + L Q+ +RFQ F + L ++ F L+
Sbjct: 626 YLVAKIVKSSISSCGVVHLDAAQMTKAKRFQEFFFNGLFG-KLFTGSKSSREFLLQKETT 684
Query: 779 I------DYLLLP------STGQL--IDWKTVA-----------TVLFPR---------- 803
+ YLLLP S+ IDWK + + L R
Sbjct: 685 LLWSPSNMYLLLPLEPWSISSNDWCKIDWKGIEACSSVVEYLKNSFLAARSYSGGGNPLP 744
Query: 804 DNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLF 863
DN + C+ ++H + + I + +V H G+IY I V+ +A S F
Sbjct: 745 DNVQSSTIECN---GTNLIHFANALVNVENIKDMVVLAIHTGRIYSIVKVVNDSSAESAF 801
Query: 864 TRNNGSVT---TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL------------SKC 908
N +VT TY +++ +RYGI L +PLL ++ + N+L SK
Sbjct: 802 EGNADNVTEFSTYTEYFNKRYGIVLMHPGQPLLRLKQSHNPHNHLVNFNDEGLLVCDSKD 861
Query: 909 RQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 968
+K+ + +PPEL I PIS+ S +PS+MHRL+ L+LA L+ +
Sbjct: 862 GMVGRKQQQHV--HMPPELLIKIDVPISV--VKSIYLMPSLMHRLECLMLASQLRQEIDC 917
Query: 969 HCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
H N IP+ +LEAITT +C E F +E LE LGDS LKYA S LF Y N HEG LS
Sbjct: 918 HA-PNFYIPSSLILEAITTLRCCESFSMERLELLGDSVLKYAVSCHLFLKYPNKHEGQLS 976
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS-----------GSYELND 1077
+ + N+ L KLG + K+ G+I +FDP+ W PG S + E+
Sbjct: 977 SWRSGAVCNSTLHKLGTDCKVQGYILDSAFDPRRWAAPGQKSVRTPAPCKCGVDTLEVPL 1036
Query: 1078 DSLFNGRKIYV-------TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
D F V +G + + SKT++D VE++IGA+ +GG + + GI
Sbjct: 1037 DRKFQTESAIVKVGKPCDSGHRWMGSKTISDCVESVIGAYYVSGGLIAAIHVMKWFGINA 1096
Query: 1131 DF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
+ + + + ++ LES L Y+F +L EA+TH S + C
Sbjct: 1097 ELDPSLISEAITSASLRSYIPKEDEIKSLESKLGYTFGVKFVLQEAMTHASIQEQGVTYC 1156
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD+VLD LIT +LY + + PG LTD+RSASVNND +A +VK L+ H+LH
Sbjct: 1157 YQRLEFLGDSVLDLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQNLYTHLLH 1216
Query: 1246 ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
S L +I V+SF + G T PKALGD+IES+AGA+ +D+ N + V+
Sbjct: 1217 CSTLLQSQITEYVNSFHESDQG--------TKAPKALGDLIESIAGALLIDTKFNLDGVW 1268
Query: 1306 QSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVT---VEVQANG 1362
+ +PLL P++TPE + P+REL E C S+ V + + KA + + VQ +
Sbjct: 1269 RIFKPLLSPIVTPEKLELPPLRELVELCD----SIGVFVKEKCTKKAEMVHAQLWVQLDN 1324
Query: 1363 RLFEHTFLDADKKTAKKVACKEVLKSLRASFPG 1395
L + ++K AK A +LK L+ G
Sbjct: 1325 ELLSGEGYEKNRKAAKGKAASCLLKKLQVCNSG 1357
>gi|50399920|gb|AAT76308.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
Length = 585
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/559 (52%), Positives = 385/559 (68%), Gaps = 13/559 (2%)
Query: 21 FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVV 79
AR YQLEALE A++ NT+ FLETGSGKTLIA+MLLR+YA+ +R+P S AVFLVP VV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ HTDL V ++ G+MGVDFWD ATW+ ++ EVLVMTPQILLD LR S+F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L I +LI DECHHARG YACI EFYH L + S+ LPRIFGM+AS I SK +
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK-DLN 211
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+Y ++I ++E LMNSKVYT SES LS +IPF++ K + I L+ ++ L
Sbjct: 212 PHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANILSCLN 271
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDF 318
+ KH +L+ L+ + E ++++SK++ T +YCL LGVWLA KAAE S E+
Sbjct: 272 RLNKKHIEALDR-KLHGSSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEVQSYEENSL 330
Query: 319 FAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS--GLLTEKIVCL 375
W E LD E I+ + + + L ++ +G IG+ KF DS G+LT K+ CL
Sbjct: 331 SFWGETLDKNVEGFIRNYSEEVHRELSCFLKNG---HIGE--KFPADSQDGILTPKVHCL 385
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
I +LL+YR ++D+RCI+FVERVIT+IVL+ LLS + + W K++AG+ G+ QSRK
Sbjct: 386 IRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSI-HQMSGWNVKHMAGSRPGLLSQSRK 444
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
EIVE FR+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSD
Sbjct: 445 NHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSD 504
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
YLL+V GD Q+ E +LASG MR+E L S+ C PL N + + +Y VEST I
Sbjct: 505 YLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIV 564
Query: 556 TLSSSVSLIYFYCSRLPSD 574
TL+SSV LI+F+CS+LPSD
Sbjct: 565 TLNSSVPLIHFFCSKLPSD 583
>gi|222613035|gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
Length = 1570
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 431/1419 (30%), Positives = 662/1419 (46%), Gaps = 195/1419 (13%)
Query: 15 SADTLPFARNYQL-EALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF 73
+ADT P R QL E E AL+ NTI L+TGSGKT++A+ML R +A
Sbjct: 33 TADTTP--RTSQLVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHAR------------ 78
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
+Q E I+ +TDL V G V W WKEE+ ++E++VMTPQILLD
Sbjct: 79 ---------RQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDA 129
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
LR ++ ++ + +LI DECH A G H YA IM
Sbjct: 130 LRHAFLTMSAVSLLIFDECHRACGSHPYARIM---------------------------- 161
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-----KYDEIPHA 248
K+Y + L +F P +T K+Y +D +
Sbjct: 162 ----------------------KIYIVEDRNELESFSPPTTIVNKYYDAYMVDFDNLKSK 199
Query: 249 LYTHLADEL--AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG------ 300
L +DE ++ L+ + S + D + E RK +S+ + +LY L++LG
Sbjct: 200 LQI-FSDEFDSLLVGLQESPSNKFKDTDNI-LETSRKSLSRYHGKILYSLNDLGPIITSE 257
Query: 301 -VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
V + +++ + + E F+ L + + +A + +P G + +S
Sbjct: 258 VVKIHIESVKPLCDSEDCIFSKASL-----CLHMSYFKEALSLIEEILPQGYGELMKSES 312
Query: 360 KFN--LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW 417
G ++ K+ LI + ++ C+IFV+R+ITA ++ + ++ C +
Sbjct: 313 GSEELTKRGYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSC-F 371
Query: 418 KTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
Y+ G ++ S Q ++ FR G VN++ T + EEG+DV +C+ VI FD R
Sbjct: 372 SISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPR 431
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL-SHASLPCSPL 536
TVCS++QSRGRAR NS+++LM++ G+ Q + + +G ++ L H + L
Sbjct: 432 TVCSYVQSRGRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDL 491
Query: 537 NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTL 594
+ + G Y V+STG T V+LI YC +LP D YF P P F + E G+ CTL
Sbjct: 492 S--IQGMYTYQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTL 549
Query: 595 YLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHD------ 646
LP N Q+++ + KQ LEACKKLHQ+G L D+L+P + E D
Sbjct: 550 TLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-LTEEPMDTDFTTA 608
Query: 647 --------AQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARN 698
+ E + + ++ S T TY + ++ NY
Sbjct: 609 DEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENY----AG 664
Query: 699 IVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
VL M EL+ ++ DL + ++ + G++QL Q+ + FQ F I
Sbjct: 665 FVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIF 724
Query: 758 D---HNLDKLNEILD-----GFELRDNLEIDYLLLP-------STGQLIDWKTVATV--- 799
H K D G E++ N E YLLLP I W+ + +
Sbjct: 725 GRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGA 784
Query: 800 ---LFPRDNGSKHNMNCSTMFNAR------IVHTKSGPLCTCKIHNSLVCTPHNGQIYCI 850
L+ G ++ + + + R I+H + L I +S+V + H G+IY +
Sbjct: 785 VEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTV 844
Query: 851 TGVLGHLNANSLFTR----NNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL- 905
++ A F T++ +Y ++YGI + +PLL ++ + N L
Sbjct: 845 LDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLF 904
Query: 906 SKCRQQKQK-------EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
SK + E +I +PPEL +I ++ SF +PS++HRLQSL+L
Sbjct: 905 SKLKYLDGSTGKPLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLML 962
Query: 959 AVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKT 1018
A L+ + N IP +LEAITT +C E F LE LE LGDS LKY LF
Sbjct: 963 ASQLRREI----GYNQHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLR 1018
Query: 1019 YQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD--------NS 1070
Y HEG LS + + + NA L K G + L G++R +FDP+ W+ PG N
Sbjct: 1019 YPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNC 1078
Query: 1071 G----------SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL 1120
G Y +D S F G+ G + + SKT++D VEAL+GA+ GG L
Sbjct: 1079 GIETAFVPSHRRYIRDDPSFFVGKPCD-RGHRWMCSKTISDCVEALVGAYYVGGGIAAAL 1137
Query: 1121 IFLDRIGIKVD-----FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHG 1175
+ GI + V + ++ ++ LE+ L Y+F LL+EA+TH
Sbjct: 1138 WVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHP 1197
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSV 1235
S + CYQRLEFLGD+VLD L+T +LY + + PG LTD+RSA V+N+ +A + V
Sbjct: 1198 SLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVV 1257
Query: 1236 KHGLHKHILHASHELYKRINITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIF 1294
++ +H H+ H S L ++I V S E S F + PK LGDI+ES+AGA+F
Sbjct: 1258 RNNIHSHLQHGSGILLEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVF 1317
Query: 1295 VDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
+D+ N ++V++ PLL P+ITP+ + P REL E C
Sbjct: 1318 IDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELC 1356
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 407/1325 (30%), Positives = 655/1325 (49%), Gaps = 169/1325 (12%)
Query: 2 EPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY 61
+P +S + S L YQL+ + A+++N IV+L TG GKT IA++L+ +
Sbjct: 59 KPGGEDSPSPYRTSGPHLCSDARYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGH 118
Query: 62 LLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
L+RKPS +QA I TD KV Y+G+ G + D W+ +M + E
Sbjct: 119 LIRKPSR--------------EQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFE 163
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
EFY+ P
Sbjct: 164 ---------------------------------------------EFYN---SNSVEKFP 175
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
R+FGMTASPI K S++ +Y + I+ LE L+++KV + +E + S ++ + Y
Sbjct: 176 RVFGMTASPIIGKGGSNKLNYTKCINSLEELLHAKVCSVDNEELES---VVASPDMEVYF 232
Query: 242 YDEIPHA-LYTHLADELAMIELKHTRSLEN--LDLNEAQAELIRKKVSKINSTLLYCLSE 298
Y + H+ L T EL ++L+ R L D ++Q +L K + +++ +++CL E
Sbjct: 233 YGPVNHSNLTTICIKELDSLKLQSERMLRASLCDFKDSQKKL--KSLWRLHENIIFCLQE 290
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGFGET--IIKKFGSDASQALVTYVPSGAEWSIG 356
LG + AL+AA T ++ D ++D G T + + A+ L G+
Sbjct: 291 LGSFGALQAARTFLSFDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSF 350
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT 416
D K L+ + K LI L Y E+++CI+FV+R+ A + ++L L C
Sbjct: 351 DLEK--LEEPFFSNKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNL---KCL 405
Query: 417 --WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
WK +++ G +SG + SR K + IV+ F G VN++VATS+ EEGLD+Q+C LV+ FD
Sbjct: 406 EFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFD 465
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
TV SFIQSRGRARM S Y+++++ + + + L Y+A + M +E+ S S
Sbjct: 466 LPETVASFIQSRGRARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTS---- 521
Query: 535 PLNNHMYG---EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMG 590
N M+ E+ Y V++TG + + SVSL++ YC LP D +F P+P F +I+ G
Sbjct: 522 ---NDMFDCLEENIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEG 578
Query: 591 I-CTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA 647
I C L LP N + Q + K+ ACL+AC KLH++GALTD LLP K+
Sbjct: 579 IICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKV 638
Query: 648 QKRGNEPYNAE---------HPIYFPPELVNQSPQDTKIT-------YHCYLIELKQHFN 691
N N H + P L P K+ Y+ I + +
Sbjct: 639 SVTNNSSNNKVEDDSLREELHEMLIPAVL---KPSGLKLDSLSNLHFYYVKFIPIPEDRR 695
Query: 692 YDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQ------VLL 744
Y + ++ + E E+ + DL + RGR+ +KHLG+I + ++L
Sbjct: 696 YQMFGLFVINPLPVEAET----LQVDLHLARGRIVKAGIKHLGKIAFEKEKASSCSSMML 751
Query: 745 CRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID---YLLLPSTGQ------LIDWKT 795
+FQ ++++D + + G ++ LEI+ YLLLP + +IDW
Sbjct: 752 AHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLPIKQKCYGDRFMIDWPA 809
Query: 796 V----ATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCIT 851
V ++ +F + + S+ + R++ G + S+V +PHN + +
Sbjct: 810 VERCLSSPIFKDPIDVSVHASYSSNESLRLL---DGIFSKTDVVGSVVFSPHNNIFFFVD 866
Query: 852 GVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL----SK 907
G+L +NA ++ ++G+ TY +H++ER+ I+L +PLL ++IF+++N L +
Sbjct: 867 GILDEINA---WSEHSGA--TYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPE 921
Query: 908 CRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLL 967
+ + +E + ELPPELC + + S S + +PS+M+RL++LL+A+ LK+++L
Sbjct: 922 TTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVML 981
Query: 968 DHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
+ I +LEA+TT+KC E LE E LGD+FLKY + F TY+ EG L
Sbjct: 982 SSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQL 1041
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG------------SYEL 1075
+ ++ +++N+ L +L +KL +IR + F+P + PG ++
Sbjct: 1042 TRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDI 1101
Query: 1076 NDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 1135
+ D+ N + K +ADVVE+LIGAFL GG FL IGI VDF N
Sbjct: 1102 HPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNP 1161
Query: 1136 PYQRQFQVHAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLE 1190
R + L ++ LE L+ Y F+ LL++A H S+ CYQ+ E
Sbjct: 1162 ALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-QHSGGCYQKTE 1220
Query: 1191 FLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
FLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +HKH++ S+ L
Sbjct: 1221 FLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHL 1280
Query: 1251 YKRIN 1255
I+
Sbjct: 1281 TSAIS 1285
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
L++ L E P C +RLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A
Sbjct: 1293 LSNSEKDLLEEPACPKRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLA 1352
Query: 1232 LSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAG 1291
++V+ +HKH++ S+ L I+ + + KLS E + PKALGDI+ES G
Sbjct: 1353 YAAVEKSIHKHLIKDSNHLTSAIS-KFEMYVKLSNSEKDLLEE-PACPKALGDIVESCIG 1410
Query: 1292 AIFVDSGCNREVVFQS 1307
A+ +DSG N V+++
Sbjct: 1411 AVLLDSGFNLNYVWKN 1426
>gi|222619725|gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
Length = 1839
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 427/1472 (29%), Positives = 669/1472 (45%), Gaps = 200/1472 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-KPSPFVAVFLVPKVVLV 81
R YQL+ E A+++NTI L+TG+GKT+IA+ML++ + + R K + V +FL P V LV
Sbjct: 37 RRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPTVQLV 96
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ E I++HTD + V+ + GA ++ + H
Sbjct: 97 TQQCEVIEIHTDFE---------VEQYYGAKGVDQWTGH--------------------- 126
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
H + T F L G G+ SS D
Sbjct: 127 ----------------GHDTTGVPTSFTQCFLNLG-------HGI----------SSHLD 153
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI- 260
+ +LE L+++K+YT + + +P +AK YD P + L++EL ++
Sbjct: 154 CEGQFCELENLLDAKIYTVSDREEIEFCVP--SAKEMCRYYDSKP-VCFEDLSEELGVLC 210
Query: 261 --------ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
EL++ RS D ++ E ++++SK + + YCL ++G+ A +A + I
Sbjct: 211 SKYDALITELQNKRSDMYKDADDITKE-SKRRLSKSIAKICYCLDDVGLICASEATK-IC 268
Query: 313 CYESDFFAW---------EQLDGFGETIIK-------KFGSDASQALVTYVPSGAEWSIG 356
W +Q D G + KF +A + + G + +
Sbjct: 269 IERGQEKGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEEALHLIDKRLQQGIDMLLN 328
Query: 357 DDSKF--NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
+S +G ++ K+ LI+ + RC+IFV+R ITA V+ ++ ++
Sbjct: 329 SESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKI-GHL 387
Query: 415 CTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
+ ++ G S + + K Q + ++ FR G VN++ T + EEG+ V C+ VI FD
Sbjct: 388 AHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFD 447
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
RT S++QSRGRAR ++S Y+LM++ G+ + + S M K S S S
Sbjct: 448 LPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLS 507
Query: 535 P--LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMG 590
P + N E YHV +TG T SS+S++Y YC +LP D + P P F + +
Sbjct: 508 PGFVPNEEINE--YHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGY 565
Query: 591 ICTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGALTDNL-------LPDIV 641
+CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+L +P+IV
Sbjct: 566 VCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLCLSVEDPVPEIV 625
Query: 642 VEKHDAQKRGNEPYNAEH-PIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR--- 697
K+ G H N + T + Y K +F D + +
Sbjct: 626 -SKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KMNFVCDQAGQIYS 680
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
VL + L E+ + DL + + ++ G ++L Q+ + FQ LF +
Sbjct: 681 EFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQAKLFQGLLFNGLF 740
Query: 758 DH--NLDKLNEILDGFELRD------NLEIDYLLLPSTGQL-----IDWKTV----ATVL 800
K+ F L N YLLLP+ I+W + V
Sbjct: 741 GKLFTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSNVCINWSVIDAAATAVK 800
Query: 801 FPRDNGSKHNMNCSTMFNAR-----IVHTKSGPLCTCKIHNSLVCTPHNGQIYC---ITG 852
R S++ +F++ ++H + + + +V H G+IY IT
Sbjct: 801 LMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDITE 860
Query: 853 VLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK 912
+ G + + T+ ++++++YGI L +PLL + + N LS + +
Sbjct: 861 LSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDE 920
Query: 913 QKEPSKIS------------FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAV 960
+S +PPEL + P+ + SF P++M+R++SL LA
Sbjct: 921 GNVVENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEI--LRSFYLFPALMYRIESLTLAS 978
Query: 961 NLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQ 1020
L++ + + I + +LEAITT +C EDF +E LE LGDS LKYA
Sbjct: 979 QLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYA---------- 1025
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS---------- 1070
EG LS + +I NA L KLG E+ + G++R +FDP+ W+ PG S
Sbjct: 1026 --DEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPV 1083
Query: 1071 GSYELNDDSLFNGRKIYVTGRKKVK------SKTVADVVEALIGAFLSTGGENVGLIFLD 1124
S + DD K V G+ K SKT+AD VEA+IGA+ + GG + L
Sbjct: 1084 KSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEAIIGAYYAGGGLRAAMAVLK 1143
Query: 1125 RIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
+GI + V Q + + LE+ L YSF LLVEALTH S
Sbjct: 1144 WLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQE 1203
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
CY+RLEFLGDAVLD L+T YL+N + + G LTD+RSASVNN+ +A +VKH
Sbjct: 1204 LGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNF 1263
Query: 1240 HKHILHASHELYKRINITVDSFEKLSLGST-FGWESVTSFPKALGDIIESLAGAIFVDSG 1298
H + H+S L +I V+ E S+ + + PK LGDI+ES+AGAI +D+
Sbjct: 1264 HHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDGLPKGPKVLGDIVESIAGAILLDTK 1323
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAV-TVE 1357
+ +VV+ PLL P++TPE + P REL E+C K+ + + + R G V T++
Sbjct: 1324 LDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKHGYFVG--INCRDQGDTVVATLD 1381
Query: 1358 VQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
VQ L +K AK A +LK L
Sbjct: 1382 VQLKEVLLVRQGFSKKRKDAKAHASSLLLKDL 1413
>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 426/1472 (28%), Positives = 668/1472 (45%), Gaps = 200/1472 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-KPSPFVAVFLVPKVVLV 81
R YQL+ E A+++NTI L+TG+GKT+IA+ML++ + + R K + V +FL P V LV
Sbjct: 37 RRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPTVQLV 96
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ E I++HTD + V+ + GA ++ + H
Sbjct: 97 AQQCEVIEIHTDFE---------VEQYYGAKGVDQWTGH--------------------- 126
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
H + T F L G G+ SS D
Sbjct: 127 ----------------GHDTTGVPTSFTQCFLNLG-------HGI----------SSHLD 153
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI- 260
+ +LE L+++K+YT + + +P +AK YD P + L++EL ++
Sbjct: 154 CEGQFCELENLLDAKIYTVSDREEIEFCVP--SAKEMCRYYDSKP-VCFEDLSEELGVLC 210
Query: 261 --------ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
EL++ RS D ++ E ++++SK + + YCL ++G+ A +A + I
Sbjct: 211 SKYDALITELQNKRSDMYKDADDITKE-SKRRLSKSIAKICYCLDDVGLICASEATK-IC 268
Query: 313 CYESDFFAW---------EQLDGFGETIIK-------KFGSDASQALVTYVPSGAEWSIG 356
W +Q D G + KF +A + + G + +
Sbjct: 269 IERGQEKGWLKEVVDATDQQTDVNGSRLFAENSALHMKFFEEALHLIDKRLQQGIDMLLN 328
Query: 357 DDSKF--NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
+S +G ++ K+ LI+ + RC+IFV+R ITA V+ ++ ++
Sbjct: 329 SESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKI-GHL 387
Query: 415 CTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
+ ++ G S + + K Q + ++ FR G VN++ T + EEG+ V C+ VI FD
Sbjct: 388 AHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFD 447
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
RT S++QSRGRAR ++S Y+LM++ G+ + + S M K S S S
Sbjct: 448 LPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLS 507
Query: 535 P--LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMG 590
P + N E YHV +TG T SS+S++Y YC +LP D + P P F + +
Sbjct: 508 PGFVPNEEINE--YHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGY 565
Query: 591 ICTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGALTDNL-------LPDIV 641
+CTL LP + +Q ++ N+ KQ CL+ACKKLH++GAL D+L +P+IV
Sbjct: 566 VCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLCLSVEDPVPEIV 625
Query: 642 VEKHDAQKRGNEPYNAEH-PIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR--- 697
K+ G H N + T + Y K +F D + +
Sbjct: 626 -SKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY----KMNFVCDQAGQIYS 680
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
VL + L E+ + DL + + ++ G ++L Q+ + FQ LF +
Sbjct: 681 EFVLLIDATLPDEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQAKLFQGLLFNGLF 740
Query: 758 DH--NLDKLNEILDGFELRD------NLEIDYLLLPSTGQL-----IDWKTV----ATVL 800
K+ F L N YLLLP+ I+W + V
Sbjct: 741 GKLFTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSNVCINWSVIDAAATAVK 800
Query: 801 FPRDNGSKHNMNCSTMFNAR-----IVHTKSGPLCTCKIHNSLVCTPHNGQIYC---ITG 852
R S++ +F++ ++H + + + +V H G+IY IT
Sbjct: 801 LMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDITE 860
Query: 853 VLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK 912
+ G + + T+ ++++++YGI L +PLL + + N LS + +
Sbjct: 861 LSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDE 920
Query: 913 QKEPSKIS------------FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAV 960
+S +PPEL + P+ + SF P++M+R++SL LA
Sbjct: 921 GNVVENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEI--LRSFYLFPALMYRIESLTLAS 978
Query: 961 NLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQ 1020
L++ + + I + +LEAITT +C EDF +E LE LGDS LKYA
Sbjct: 979 QLRSEI---GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYA---------- 1025
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS---------- 1070
EG LS + +I NA L KLG E+ + G++R +FDP+ W+ PG S
Sbjct: 1026 --DEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPV 1083
Query: 1071 GSYELNDDSLFNGRKIYVTGRKKVK------SKTVADVVEALIGAFLSTGGENVGLIFLD 1124
S + DD K V G+ K SKT+AD EA+IGA+ + GG + L
Sbjct: 1084 KSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCFEAIIGAYYAGGGLRAAMAVLK 1143
Query: 1125 RIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
+GI + V Q + + LE+ L YSF LLVEALTH S
Sbjct: 1144 WLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQE 1203
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
CY+RLEFLGDAVLD L+T YL+N + + G LTD+RSASVNN+ +A +VKH
Sbjct: 1204 LGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNF 1263
Query: 1240 HKHILHASHELYKRINITVDSFEKLSLGST-FGWESVTSFPKALGDIIESLAGAIFVDSG 1298
H + H+S L +I V+ E S+ + + PK LGDI+ES+AGAI +D+
Sbjct: 1264 HHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDGLPKGPKVLGDIVESIAGAILLDTK 1323
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAV-TVE 1357
+ +VV+ PLL P++TPE + P REL E+C K+ + + + R G V T++
Sbjct: 1324 LDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKHGYFVG--INCRDQGDTVVATLD 1381
Query: 1358 VQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
VQ L +K AK A +LK L
Sbjct: 1382 VQLKEVLLVRQGFSKKRKDAKAHASSLLLKDL 1413
>gi|378405592|gb|AFB82635.1| dicer-2 [Marsupenaeus japonicus]
Length = 1502
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 420/1482 (28%), Positives = 671/1482 (45%), Gaps = 218/1482 (14%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KP 66
+ EE SAD P R+YQLE ALK+N+I+ L TGSGKT I+I+L++ + +R K
Sbjct: 4 SKEEASADFCP--RSYQLELFNCALKKNSILVLGTGSGKTFISILLIKELGHQIRESLKG 61
Query: 67 SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
VF+V V LV QQA AI+ HT +VGKY G MGVD+W W+ E+ KHEVLV+
Sbjct: 62 GSKRTVFVVNTVPLVHQQAAAIQQHTPFEVGKYEGSMGVDYWTDEHWQNELEKHEVLVVV 121
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
QI LD + + L+ + +LI+DECHHA G H IM Y L + LPRI G+
Sbjct: 122 AQIFLDLILHAKLPLSSVNLLIMDECHHATGSHPMREIMRA-YENLKQHSPEKLPRIMGL 180
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TA + K E + + LE M+ + T + + K + + I
Sbjct: 181 TACVVHRKCKRRE--VLKYMESLEAAMDCALVTSVDPETVLKYTTGPKEKVICFYTESIT 238
Query: 247 HALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
+ +LA +E + + +N + I+KKV I + +S+LG W +
Sbjct: 239 SDYQETVKAQLAGLECD---IITDCFINYKARKQIKKKVKNIE----HIMSDLGDWCVAR 291
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
A + + E LD ET + + L E + + K + G
Sbjct: 292 AIK---------YEIEHLD---ETEGMEEDPKIREILKLLSEKLREVYVACELK---EKG 336
Query: 367 LL--TEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELL---PRHCTWKT 419
+ E I ++SLLE + +++ +IFVE TA +L LL E+ P K
Sbjct: 337 MANPVEHITFKVKSLLEIFSKCNKEVFGLIFVESRNTAKILYDLLLEIAKQNPEFSFVKP 396
Query: 420 KYIAGNNS--GIQCQ----SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
Y+ G NS GI + +KQ E +E FRRG N +++TS+LEEG+D++ CN+V+ F
Sbjct: 397 SYVVGCNSRPGIDIRLAELELRKQRETLENFRRGETNFLISTSVLEEGVDIRKCNVVVRF 456
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC 533
D + +++QSRGRAR + S YLLMV+ + + + +LP
Sbjct: 457 DMPQNYRAYVQSRGRARAKPSVYLLMVEEAKVSEMLECIGVYKEIEDSLQYLCHGRNLPT 516
Query: 534 SPLNNHMYGEDFY--HVESTGTIA---TLSSSVSLIYFYCSRLPSDGYFKPTPKF--HIN 586
+ + ED Y E G + T +S++ L+ YC + PSD + P+ +
Sbjct: 517 AQTTRKHFAEDEYIKPYEPYGPVGPKITSNSAIQLVNLYCGKFPSDKFTDNLPEVVEEVK 576
Query: 587 KEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVE 643
+ M + LP P++ +I N K++A L+ C KLH++G L NL P
Sbjct: 577 EGMTTVGIRLPIMAPLKDMIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPK--ES 634
Query: 644 KHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH----CYLIELKQHFNYDISARNI 699
D+ G E P+ PE ++S + H CY + +Y + + +I
Sbjct: 635 NDDSLVEGLVDLPPEEPV---PEGTSESGTRKRRRVHAKDLCYPFSNEHGGSYCLYSIDI 691
Query: 700 VL------AMRTELESEIKKVNFDLE------------VERGRLTVNLKHLGRIQLIPNQ 741
++ + + I K+ F + + G + VN++ +G + +
Sbjct: 692 KPFGQSGESVTIDSSTCISKIGFICKEGLVSSPFPLFFSKWGDVMVNVREVGPLTDLDTS 751
Query: 742 VLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP-STGQLID-------- 792
+ +I F ++ N+ +LNE L F+ + + D ++P ++ID
Sbjct: 752 LF----DKIKKFHRLVFENIIELNENLMSFDPEKS-KWDVFIVPLDFSEIIDLNMLNEIY 806
Query: 793 -WKTVATVLFPRDNGSKHNMNCS---TMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIY 848
+ ++ V+ HN N + F +++ + G P N Q+Y
Sbjct: 807 SFDSIKPVMI-----KSHNQNTKFVRSKFEDALIYPQYG-------------IPSN-QMY 847
Query: 849 CITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKC 908
++ + LN + F +Y++++ ERYG++L +PLL + I NYL K
Sbjct: 848 YVSHIFDELNPCNTFPEGLKGYESYERYFLERYGLELKDKNQPLLEAKHIPKELNYLKKI 907
Query: 909 RQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL---------- 958
++ +++ + PE C +I PI S ++ +PSI HRL S L
Sbjct: 908 PKKAREKKGNLVPRFVPEFCGLI--PIKASLWWQIMCMPSIFHRLNSFNLMHEFIVKTKI 965
Query: 959 -AVNLKNMLLDHCMQNV-----------TIP------------TIKVLEAITTKKCQED- 993
+ +KN +LD T+P +L A T K+ ED
Sbjct: 966 TSPAIKNEVLDFSWTKKFIYELLGSSENTVPRFLDRKKQEYIHPFSMLHAFTLKEASEDK 1025
Query: 994 -FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGF 1052
F+LE LE LGDSFLK+ + LF ++ HEG LS + + + N L +L C++ L G
Sbjct: 1026 EFNLERLELLGDSFLKFVTGEALFLRDESYHEGRLSQSRGKRVCNKTLFRLACQKGLEGK 1085
Query: 1053 IRTESFDPK--------------------------MW-IIP------GD-NSGSYELNDD 1078
I + +PK W +P GD + L D
Sbjct: 1086 IAAKVLNPKKNGSIPGFRIKPEFEESLRSLEVPHDFWHQVPNTVKDVGDLKEAVFALMSD 1145
Query: 1079 SLFNGRKIYVTG-------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 1131
K G +V K++AD VEA+IGA+L G FL +G+ V
Sbjct: 1146 DASKDEKAEKKGSCYNPWTEHEVSDKSIADCVEAIIGAYLRVCGNEAAAAFLHWLGVGVF 1205
Query: 1132 FVNVPYQRQFQVHAERLVN--------------VRHLESLLNYSFRDPSLLVEALTHGSY 1177
N V R+ + LE + Y+FRD S +V+A+TH SY
Sbjct: 1206 RDNSLLMEPKTVRTARVRKECAQDLTIFYKKAVLDRLEKKIGYTFRDRSFIVQAVTHSSY 1265
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
+ ++ CYQRLEFLGDAVLDYL+T +++ ++ SPG L+D+RS V ND ++ K
Sbjct: 1266 VNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYSPGQLSDLRSYFVKNDTLGRAAAKG 1325
Query: 1238 GLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTS------FPKALGDIIESLAG 1291
LH+H+LH + +L I+ + + LG E PKALGD++E++ G
Sbjct: 1326 KLHQHLLHINPKLEASIDKFLSILHQDPLGEELNTEDDVQDCEDVEIPKALGDMVEAIIG 1385
Query: 1292 AIFVDSGCNREVVFQSIRPLLEPMITP--ETMRFHPVRELTE 1331
A+++DS + +V +Q I +LE ++ +T++ +P+R+L E
Sbjct: 1386 AVYLDSNRSLKVAWQVIERILEDLLNTSIQTIQLNPIRQLLE 1427
>gi|328905041|gb|AEB54796.1| dicer 2 [Litopenaeus vannamei]
Length = 1502
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 423/1488 (28%), Positives = 679/1488 (45%), Gaps = 230/1488 (15%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KP 66
+ EE SAD P R+YQLE ALK+N+I+ L TGSGKT I+I+L++ + +R K
Sbjct: 4 SKEEASADFCP--RSYQLELFNCALKKNSILVLGTGSGKTFISILLIKELGHQIRESLKG 61
Query: 67 SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
VF+V V LV QQA AI+ HT +VGKY G MGVD+W W+ E+ KHEVLV+
Sbjct: 62 GSKRTVFVVNTVPLVHQQAAAIQQHTPFEVGKYEGSMGVDYWTDEHWQNELEKHEVLVVV 121
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
QI LD + + L+ + +LI+DECHHA G H IM Y L + LPRI G+
Sbjct: 122 AQIFLDLILHAKLPLSSVNLLIMDECHHATGSHPMREIMRA-YENLKQHSPEKLPRIMGL 180
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TA + K E + + LE M+ + T + + K + + I
Sbjct: 181 TACVVHRKCKRRE--VLKYMESLEAAMDCALVTSVDPETVLKYTTGPKEKVICFYTESIT 238
Query: 247 HALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
+ +LA +E + + +N + I+KKV I + +S+LG W +
Sbjct: 239 SDYQETVKAQLAGLECD---IITDCFINYKARKQIKKKVKNIE----HIMSDLGDWCVAR 291
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
A + + E LD ET + + L E + + K + G
Sbjct: 292 AIK---------YEIEHLD---ETEGMEEDPKIREILKLLKERLREVYVACELK---EKG 336
Query: 367 LL--TEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELL---PRHCTWKT 419
+ E I ++ LLE + +++ +IFVER TA +L LL E+ P K
Sbjct: 337 MANPVEHITFKVKRLLEIFSKCNKEVFGLIFVERRNTAKILYDLLLEIAKQNPEFSFVKP 396
Query: 420 KYIAGNNS--GIQCQ----SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
Y+ G NS GI + +KQ E +E FR+G N +++TS+LEEG+D++ CN+V+ F
Sbjct: 397 SYVVGCNSRPGIDIRLAELELRKQKETLENFRKGETNFLISTSVLEEGVDIRKCNVVVRF 456
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK-----EVLSH 528
D + +++QSRGRAR + S YLLMV+ ++++ L R+ + L H
Sbjct: 457 DMPQNYRAYVQSRGRARAKPSVYLLMVE------EAKVSEMLECIGVYREIEDSLQYLCH 510
Query: 529 A-SLPCSPLNNHMYGEDFY--HVESTGTIA---TLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+LP + + ED Y E G + T +S++ L+ YC +LPSD + P+
Sbjct: 511 GRNLPTAQTTRKHFAEDEYIKPYEPYGPVGPKITSNSAIQLVNLYCGKLPSDKFTDNLPE 570
Query: 583 F--HINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLL 637
+ + M + LP P++ +I N K++A L+ C KLH++G L NL
Sbjct: 571 VVEEVKEGMTTVGIRLPIMAPLKDMIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLR 630
Query: 638 PDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH----CYLIELKQHFNYD 693
P D+ G E P+ PE ++S + H CY + +Y
Sbjct: 631 PK--ESNDDSLVEGLVDLPPEEPV---PEGTSESGTRKRRRVHAKDLCYPFSNEHGGSYC 685
Query: 694 ISARNIVL------AMRTELESEIKKVNFDLE------------VERGRLTVNLKHLGRI 735
+ + +I ++ + + I K+ F + + G + VN++ +G +
Sbjct: 686 LYSIDIKPFGQSGESVTIDSSTCISKIGFICKEGLVSSPFPLFFSKWGDVMVNVREVGPL 745
Query: 736 QLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP-STGQLID-- 792
+ + +I F ++ NL +LNE L F+ + + D ++P ++ID
Sbjct: 746 TDLDTSLF----DKIKKFHRLVFENLIELNENLMSFDPEKS-KWDVFIVPLDFSEIIDLN 800
Query: 793 -------WKTVATVLFPRDNGSKHNMNCS---TMFNARIVHTKSGPLCTCKIHNSLVCTP 842
+ ++ V+ HN N + F +++ + G P
Sbjct: 801 MLNEIYSFDSIKPVML-----KSHNQNTKFVRSKFEDALIYPQYG-------------IP 842
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQ 902
N Q+Y ++ + LN + F +Y++++ ERYG+++ +PLL + I
Sbjct: 843 SN-QMYYVSHIFDELNPCNTFPEGKKGYESYERYFLERYGLEIKDKNQPLLEAKHIPKEL 901
Query: 903 NYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL---- 958
NYL K ++ +++ + PE C +I PI S ++ +PSI HRL S L
Sbjct: 902 NYLKKIPKKAKEKKGNLVPRFVPEFCGLI--PIKASLWWQIMCMPSIFHRLNSFNLMHEF 959
Query: 959 -------AVNLKNMLLDHCMQNV-----------TIPT------------IKVLEAITTK 988
+ +KN +LD T+P +L A T K
Sbjct: 960 IVKTKITSPAIKNEVLDFSWTKKFIYELLGSSENTVPIFLDRKKQEYIHPFSMLHAFTLK 1019
Query: 989 KCQED--FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
+ ED F+LE LE LGDSFLK+ + LF ++ HEG LS + +++ N L +L C+
Sbjct: 1020 EASEDKEFNLERLELLGDSFLKFVTGEALFLRDESYHEGRLSQSRGKLVCNKTLFRLACQ 1079
Query: 1047 QKLPGFIRTESFDPK--------------------------MW-IIP------GD-NSGS 1072
+ L G I + +PK W +P GD
Sbjct: 1080 KGLEGKIAAKVLNPKKNGSIPGFRIKPEFEESLRSLEVPHDFWHQVPNTVKDVGDLKEAV 1139
Query: 1073 YELNDDSLFNGRKIYVTG-------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
+ L D K G +V K++AD VEA+IGA+L G FL
Sbjct: 1140 FALMSDDASKDEKAEKKGSCYNPWTEHEVSDKSIADCVEAIIGAYLLVCGNEAAAAFLHW 1199
Query: 1126 IGIKVDFVNVPYQRQFQVHAERLVN--------------VRHLESLLNYSFRDPSLLVEA 1171
+G+ V N V R+ + LE + Y+FRD S +V+A
Sbjct: 1200 LGVGVFRDNSLLMEPKTVRTARVRKECAQDLTIFYKKAVLDRLEKKIGYTFRDRSFIVQA 1259
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
+TH SY+ ++ CYQRLEFLGDAVLDYL+T +++ ++ SPG L+D+RS V ND
Sbjct: 1260 VTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYSPGQLSDLRSYFVKNDTLG 1319
Query: 1232 LSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWES------VTSFPKALGDI 1285
++ K LH+H+LH + +L I+ + + LG E PKALGD+
Sbjct: 1320 RAAAKGKLHQHLLHLNPKLEASIDKFLSILHQDPLGEELNTEDDVQDCEDVEIPKALGDM 1379
Query: 1286 IESLAGAIFVDSGCNREVVFQSIRPLLEPMITP--ETMRFHPVRELTE 1331
+E++ GA+++DS + +V +Q I +L ++ +T++ +P+R+L E
Sbjct: 1380 VEAIIGAVYLDSNRSLKVAWQVIERILGDLLNTSIQTIQLNPIRQLLE 1427
>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
sativus]
Length = 1228
Score = 474 bits (1220), Expect = e-130, Method: Compositional matrix adjust.
Identities = 328/1002 (32%), Positives = 516/1002 (51%), Gaps = 83/1002 (8%)
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G +N+++AT + EEGLD+Q+C LVI FD TV SFIQSRGRARM S+Y +V SG+
Sbjct: 49 GALNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEK 108
Query: 507 TQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYF 566
+ + N+M +E+ S +S ++H E Y V STG T S+SL++
Sbjct: 109 ELGLINEFRKDENRMNREIYSRSS--NETFDSHE--ESIYRVASTGASITSGRSISLLHE 164
Query: 567 YCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEA 622
YCS+LP D YF P P+F ++G +C + LP+N PI +++ Q + K+ ACL+A
Sbjct: 165 YCSKLPHDDYFDPKPQFSYYDDLGGTVCHVNLPSNAPIPQIVSRSQSSKDAAKKDACLKA 224
Query: 623 CKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE-----------HPIYFPPELVNQS 671
++LH++GAL+D LLP + Q+ G +++ H + FP L
Sbjct: 225 VEELHKLGALSDYLLPMRGRGSANEQESGLNSSDSDSSEDETSRRELHEMIFPAALKESW 284
Query: 672 PQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGR-LTVNLK 730
+ +CY I+ D + + L ++ L E +++ +L + RGR + VNL
Sbjct: 285 TGSGYLVLYCYHIKCTPD-PRDRNYKEFGLFVKAPLPQEAERMGLELHLARGRSVMVNLI 343
Query: 731 HLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDN----LEIDYLLLP- 785
G ++L+ ++ FQ +VI LD+L + + LR+N + YLLLP
Sbjct: 344 PSGVVELLEEEITQAESFQEMFLKVI----LDRLEFVQEYIPLRNNASRSVSSSYLLLPM 399
Query: 786 ----STGQL-IDWKTV----ATVLFPRDNG--SKHNMNCSTMFNARIVHTKSGPLCTCKI 834
+ G L IDW + ++ +F D K + T H +S I
Sbjct: 400 IFHDNEGSLFIDWNVIRRCLSSKIFQNDACLIVKGTASSDTHLMLYDGHRRSS-----DI 454
Query: 835 HNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN 894
NSLV P+ G+ +T + N +S + N +++ +H + ++GI L + +PLL
Sbjct: 455 ENSLVYVPYKGEFXFVTNIERGKNGHSQY--KNSGFSSHFEHLKTKFGIHLNYPEQPLLR 512
Query: 895 GRRIFHVQNYLSKCRQQKQKEPSKIS---FELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
+ +F + N+L R+++ E + ELPPE+C++ + S S + +PSIMH
Sbjct: 513 AKPLFLLHNWLHN-RKREDSEARHLEEYFIELPPEVCQLKIIGFSKDIGSSISLLPSIMH 571
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
RL++LL+A+ LK L + ++LEA+TT+KCQE LE LE LGDSFLK+A
Sbjct: 572 RLENLLVAIELKCRLAAAFPAGAEVTANRILEALTTEKCQERISLERLEILGDSFLKFAV 631
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---- 1067
++ LF T+ EG L+ ++ ++ N L KL + L +IR + F+P + + G
Sbjct: 632 ARYLFLTHDKFDEGELTRRRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLLGRPCP 691
Query: 1068 -----DNSGSYELNDDSLFNGRKIYV---TGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
+ S +DD+ N + G ++ KT++DVVEAL+GAFL G
Sbjct: 692 RICNEETSKDIHSHDDATNNAKANETKCSKGHHWLQKKTISDVVEALVGAFLVDSGFKAA 751
Query: 1120 LIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTH 1174
+ FL IGI+V+F + V +++ L++ L + F LL++AL H
Sbjct: 752 IAFLKWIGIQVEFEASLVTDALMASNAYVLLADSIDISALQNSLGHRFLHKGLLLQALVH 811
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY CYQRLEFLGDAVLDYLIT YLY+ YP L PG LTD+RS V N+ +A +
Sbjct: 812 PSYH-KHGGGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVA 870
Query: 1235 VKHGLHKHILHASHELYKRIN-----ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESL 1289
V +K +L S L I I FE+ SL PKALGD++ES
Sbjct: 871 VDRFFYKFLLCDSTSLLSDIKSYVHFIKAPPFERDSL-------EQPRCPKALGDLVESS 923
Query: 1290 AGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRIS 1349
GA+ VD+G + V++ + ++P+++ + P+R++TE+CQ + +K +S++
Sbjct: 924 VGAVLVDTGFDMNCVWKIMLSFIDPIMSFSGFQLSPIRDITEFCQNCGWKLKFN-SSKME 982
Query: 1350 GKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
G +V EV+ + + KK A K+A +L L+A
Sbjct: 983 GYYSVKAEVKGGNFHATASAANRRKKDAAKIAANLILTKLKA 1024
>gi|414871004|tpg|DAA49561.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1199
Score = 461 bits (1187), Expect = e-126, Method: Compositional matrix adjust.
Identities = 343/1109 (30%), Positives = 545/1109 (49%), Gaps = 99/1109 (8%)
Query: 366 GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
G ++ K+ LI + E++ C+IFVER+ TA ++ + + + Y+ G
Sbjct: 14 GYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNV-NFSRFSISYLTGG 72
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
++ S Q ++ FR G VN++ T + EEG+DV +C+ VI FD RTVCS++QS
Sbjct: 73 STSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQS 132
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF 545
RGRAR +S Y+LM++ G+ Q + + + ++ L H L+ + +
Sbjct: 133 RGRARKSSSSYVLMIERGNLAQQEHIFRIIRTEYYVKTFAL-HKQPNTPSLDLPLQEKYI 191
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQ 603
YHVESTG T V+LIY YC +LP D Y+ P P F + + G CTL +P+N +
Sbjct: 192 YHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCTLTMPHNAAFR 251
Query: 604 TVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP------DIVVEKHDAQKRGNEPY 655
+++ + KQ CLEACKKLH++G L D+L+P DI + D +
Sbjct: 252 SIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVPLTEEPMDIDTDTTDKKCVSGPGT 311
Query: 656 NAEHPIYFPPEL----VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEI 711
++ + N + + + Y + + ++ A VL M + L+ ++
Sbjct: 312 TKRKELHGTINVHGLSGNWIHESETVILNAYTFDFRCDQEGELYA-GFVLLMESVLDDDV 370
Query: 712 KKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLF-----RVIMDHNLDKLN 765
+ DL + ++ + G+IQL Q+ + FQ F R+ D+L
Sbjct: 371 ARSEIDLFLIPNKMVYTTMTPCGKIQLNKEQLCKGKLFQEFFFNGIFGRLFHGSRTDELQ 430
Query: 766 E---ILDGFELRDNLEIDYLLLP--STGQL-----IDWKTVATV---------LFPRDNG 806
G E++ + YLLLP ++ Q+ I W+ V + L+ D
Sbjct: 431 REFIFTKGHEIQWGSDNMYLLLPLRNSSQIQHDPNIYWEAVESCSGTVEQLRNLYLEDGN 490
Query: 807 SKHNMNCSTMFNAR---IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLF 863
H CS + + I+H + L + +S+V + H G+IY + ++ A+ F
Sbjct: 491 LNHENLCSHKRSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSF 550
Query: 864 TRN-NGSVT---TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-SKCRQQKQK---- 914
NG + ++ +Y ++YGI + +PLL ++ + N L SK + Q
Sbjct: 551 DEMYNGKASPFASFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNP 610
Query: 915 ---EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 971
E +I +PPEL +I ++ SF +PS+MHR+QSL+LA L++
Sbjct: 611 LLVEKEQIHARVPPEL--LIHIDVATDILKSFYLLPSVMHRVQSLMLASQLRS------- 661
Query: 972 QNVT----IPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
N++ IP+ +LEAITT +C E F LE LE LGDS LKY LF Y HEG L
Sbjct: 662 -NISYIQRIPSSLILEAITTLRCCESFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHL 720
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS----------------- 1070
S + + + NA L K G Q L G+IR +FDP+ W+ PG S
Sbjct: 721 SDMRSKAVCNATLHKHGIWQSLQGYIRDAAFDPRRWVAPGQISLRPFPCNCGIETAFVPF 780
Query: 1071 -GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK 1129
G Y ++DD F K G + + SKTV+D VEAL+GA+ GG + + GI
Sbjct: 781 NGGY-ISDDPSFVVGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGID 839
Query: 1130 VDF-VNVPYQRQFQVHAERLV------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 1182
V + + + ++ +A R+ ++ LE+ L Y+F LL+EA++H S +
Sbjct: 840 VRCDMELVQKAKYNSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGV 899
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
CYQRLEFLGD+VLD LIT +LY + + PG LTD+RSASV+N+ +A + V++ +H H
Sbjct: 900 DYCYQRLEFLGDSVLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNH 959
Query: 1243 ILHASHELYKRINITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
+ H S L +++ V S E + F ++ PK LGDI+ES+ GAIF+D +
Sbjct: 960 LQHGSGILLEQVTEYVRSNLEYHGKENQFLQQATCKAPKVLGDIMESITGAIFIDVNFDV 1019
Query: 1302 EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQAN 1361
++V++ + PLL PMITP+ + P REL E C ++ S + + ++VQ
Sbjct: 1020 DLVWKIVEPLLSPMITPDKLALPPYRELLELCSHLGCFIESKCTSE-GEELIIEMKVQLR 1078
Query: 1362 GRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
D + KTAK A +L ++
Sbjct: 1079 DEQLIAQGHDRNGKTAKANAAARILVDMK 1107
>gi|41469334|gb|AAS07190.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 538
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/543 (44%), Positives = 341/543 (62%), Gaps = 27/543 (4%)
Query: 385 VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEF 444
++D+RCI+FVERVIT+IVL+ LLS + + W K++AG+ G+ QSRK EIVE F
Sbjct: 2 MQDLRCIVFVERVITSIVLEHLLSSI-HQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESF 60
Query: 445 RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
R+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSDYLL+V GD
Sbjct: 61 RKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGD 120
Query: 505 STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLI 564
Q+ E +LASG MR+E L S+ C PL N + + +Y VEST I TL+SSV LI
Sbjct: 121 VEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLI 180
Query: 565 YFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACK 624
+F+CS+LPSD YF P P+F I+K G CTL+LP + P+QTV +G LK+ CL+AC+
Sbjct: 181 HFFCSKLPSDEYFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQ 240
Query: 625 KLHQIGALTDNLL----------PDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQD 674
+LH IGALTD+LL PDIVVE E P YFP E V+
Sbjct: 241 ELHAIGALTDSLLPELDVPCDEEPDIVVEN-----------KIEQPSYFPEEFVDNWRSF 289
Query: 675 TKI-TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLG 733
+++ Y+CY I L + S +I+LA++ +L S+ +F L + +V +K++G
Sbjct: 290 SRLGIYYCYKISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVG 348
Query: 734 RIQLIPNQVLLCRRFQITLFR-VIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLID 792
I L QV++ RRFQ T+ +I D +L+ N I E++ + + YLLLP ID
Sbjct: 349 IIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRID 408
Query: 793 WKTVATVLFP-RDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCIT 851
W ++ P + +KH +C + + ++ TK GP C C + NS+VCTPHN Y I+
Sbjct: 409 WCSMKFSSSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVIS 468
Query: 852 GVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQ 911
G L L+ANS +++G+V TYK +++ R+G+ L F+ +PLL G + V+N+L C +
Sbjct: 469 GFLD-LDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSK 527
Query: 912 KQK 914
K+K
Sbjct: 528 KEK 530
>gi|449528774|ref|XP_004171378.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 453
Score = 441 bits (1135), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/429 (54%), Positives = 301/429 (70%), Gaps = 15/429 (3%)
Query: 491 MQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVES 550
M+NSDY+LMVKSGDSTT SRL+ YLASG MR E L HASLPC P + Y E+ Y+VES
Sbjct: 1 MKNSDYILMVKSGDSTTLSRLQRYLASGEIMRNESLCHASLPCVPFRSD-YDEESYYVES 59
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGN 610
TG + TLSSSV LIYFYCSRLPSD YFKPTP++ +KE CTL+LP + P+QT ++ +
Sbjct: 60 TGAVVTLSSSVGLIYFYCSRLPSDCYFKPTPRW--DKET--CTLHLPKSSPLQTFSSKDD 115
Query: 611 IKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQ 670
K KQ+ACLEACK+LH GALTDNL+P IV E+ AQ+ N+P + E PIY PPE V+
Sbjct: 116 AKYSKQSACLEACKQLHTCGALTDNLVPQIVAEESVAQE-WNKPLDDEQPIYVPPEFVHC 174
Query: 671 SPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLK 730
P ++ + YHCYLIELKQ+F+YDISA NIVLAMRTELE E++ + DL+V+RG VN K
Sbjct: 175 CPHNSSVVYHCYLIELKQNFHYDISAHNIVLAMRTELEFEVQSMCHDLDVDRGSFDVNFK 234
Query: 731 HLGRIQLIPNQVLLCRRFQITLFRVIMDHNL-DKL---NEILDGFELRDNLEIDYLLLPS 786
++G I+L P QVLL R+FQ T+FRV+++H DKL NEI G D +DYLLLPS
Sbjct: 235 YVGIIKLSPEQVLLSRQFQRTIFRVLLNHTWTDKLSENNEICLG----DGPRVDYLLLPS 290
Query: 787 T-GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNG 845
T G+LI W+ V +VL H S+ + V TKSG +C C++ NS+V TPHN
Sbjct: 291 TGGELISWEIVLSVLVSSREYCVHRGISSSKDVSYDVPTKSGLVCICRLQNSVVYTPHND 350
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL 905
+YCIT VL LN NSL + YK++Y+ R+GI L F+++PLL G++IF V NY+
Sbjct: 351 HVYCITSVLSELNGNSLLKIRKNEMMAYKEYYKVRHGIDLRFEKQPLLRGKKIFPVHNYI 410
Query: 906 SKCRQQKQK 914
+ R+ K++
Sbjct: 411 KRFRKHKEQ 419
>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1758
Score = 441 bits (1135), Expect = e-120, Method: Compositional matrix adjust.
Identities = 348/1146 (30%), Positives = 542/1146 (47%), Gaps = 155/1146 (13%)
Query: 378 SLLEYRGVE--DIRCIIFVERVITAIVLQSLLSELLP-RHCTWKTKYIAGNNSGIQCQSR 434
S+ EY+ VE + C+IFVER+ITA V++ + ++ H T Y+ G+N+ +R
Sbjct: 434 SINEYKRVEPSQLLCLIFVERIITAKVIERFVKKVSQISHLT--VAYVTGSNTSADALAR 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
K+Q EI++ FR G VN++ T +LEEG+ V +C+ VI FD TVCS+IQSRGR+R NS
Sbjct: 492 KRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPTTVCSYIQSRGRSRRANS 551
Query: 495 DYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS--HASLPCSPLNNHMY---GEDFYHVE 549
++LM++ G+ +++L + + S M +S H S N + + Y V+
Sbjct: 552 QFILMLERGNLKQRNQLFDIIRSERSMNDAAVSKDHES------NLRAFTVRKTESYCVD 605
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMG--ICTLYLPNNCPIQTVI 606
STG TL SSVSLI YC +LP D Y P F + E G +C L LP N QT++
Sbjct: 606 STGASVTLDSSVSLINQYCEKLPRDKYSSAKPNFVSLPMEGGGHVCKLILPPNAAFQTLV 665
Query: 607 AQG--NIKTLKQAACLEACKKLHQIGALTDNLLP---------DIVVEKHDAQKRGNEPY 655
+++ K CLEACKKLHQ+GAL D+L+P +I+ K +
Sbjct: 666 GPSGKDVRQAKTLVCLEACKKLHQMGALNDHLVPFVEDPLEADNIIKNKESSAAAAAGAG 725
Query: 656 NAEHPIYFPPELV-------NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELE 708
+ V P K +H Y E K + +I + VL + ++L+
Sbjct: 726 TTKRKELHGTASVRALCGSWGDKPDGAK--FHAYKFEFKCNIVSEIYS-GFVLLVESKLD 782
Query: 709 SEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEIL 768
++ + DL + + ++ G++ L QV + F F + + K +
Sbjct: 783 DDVGNIELDLYLISKMVKTSVISCGQVDLDAEQVTKAKGFHELFFNGLFGRLIRKSTTVQ 842
Query: 769 D--GFELRDNLEI------DYLLLPSTGQ--------LIDWKTV----ATVLFPR----- 803
F L+ + E+ YLLLP I W + + + F R
Sbjct: 843 GEREFLLQKDSELLWSPKNSYLLLPLEKSNDICIRSLQIHWSAINSCASAIEFVRQRFSL 902
Query: 804 ------DNGSKHNMNCSTMFNARIVHTKS--------GPLCTCKIHNSLVCTP------- 842
DN + C T N++I+ P C + + + C
Sbjct: 903 VTEVSDDNSKIISPPCDTD-NSKIISPPCDTDNRKIISPPCDTRSSSDMECESTNMFHFA 961
Query: 843 -----------------HNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEER 880
H G++YCI V+ + +A S F N+ T+ +++++R
Sbjct: 962 NCVVDVSSVKDNVALAIHTGKVYCIIDVVDNSSAESPFDGNSDKSGAEDKMTFTQYFQKR 1021
Query: 881 YGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK----------ISFELPPELCRI 930
YGI L +PLL ++ + N ++ + S + +P EL +
Sbjct: 1022 YGITLRHPEQPLLRLKQGHNAHNLFLNLPEEDGGDKSSQVGPVAPKVPVHVHIPSEL--L 1079
Query: 931 IMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKC 990
+ + + S +PS+M+R++SL+L+ L+ + H N IP+ VLEA+TT +C
Sbjct: 1080 CLLDVKRDVYKSMYLLPSLMYRIESLMLSSQLRAEINGH-TDNFKIPSSLVLEALTTLRC 1138
Query: 991 QEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLP 1050
E F +E LE LGDS LKYA S L+ Y HEG LS ++ + N+ L KLG + L
Sbjct: 1139 CEKFSMERLELLGDSVLKYAVSCHLYLKYPKKHEGHLSSLRQWAVRNSTLHKLGTDHNLQ 1198
Query: 1051 GFIRTESFDPKMWIIPGDNS----------GSYELNDDSLFNGR-------KIYVTGRKK 1093
G+IR +F+P+ WI PG + + E+ D F+ K+ G +
Sbjct: 1199 GYIRDSAFEPRRWIAPGQDCIHTVPCDCGLETLEVPLDVKFHTEDPKVVVGKLCDRGHRW 1258
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR-----QFQVHAERL 1148
+ SKT+AD VEALIGA+ GG L + +GI + + ++
Sbjct: 1259 MCSKTIADCVEALIGAYYVGGGLIASLHMMKWLGIDSGLEPSMVDKAITAASLHTYTPKV 1318
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
+ LE+ + Y F LLVEA TH S CY+RLEFLGD+VLD LIT +L+
Sbjct: 1319 NEIASLEAKIGYEFSVKGLLVEATTHLSESEHGTGCCYERLEFLGDSVLDLLITWHLFQS 1378
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
+ + PG LTD+RSASVNN+ +A ++V+ LH+H+LH+S L +I E + S
Sbjct: 1379 HTEIDPGELTDLRSASVNNENFAQAAVRRNLHQHLLHSSGLLQSQI------LEYAKVIS 1432
Query: 1269 TFGWESV----TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFH 1324
+V PKALGD++ES+AGAI +D+ + + V++ PLL P++TPE +
Sbjct: 1433 EPEDNAVPLQGIKAPKALGDLVESIAGAILIDTKLDLDQVWKVFNPLLSPIVTPEKLELP 1492
Query: 1325 PVRELTEYCQKNHFSMKKPVASRISGKAA-VTVEVQANGRLFEHTFLDADKKTAKKVACK 1383
P+REL + + +K V+ G V + VQ +KK+AK A
Sbjct: 1493 PLRELMQLSDSLGYFVKVKVSHDKKGTMEHVEIRVQLPNERLVREGKGPNKKSAKGDAAF 1552
Query: 1384 EVLKSL 1389
++LK L
Sbjct: 1553 QLLKDL 1558
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 178/310 (57%), Gaps = 15/310 (4%)
Query: 4 VSMESDTTEE-VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
V +S EE + A+ +P R QLEA E A K+NTI ++TGSGKTLIAI+L++
Sbjct: 36 VEQDSPAQEETLIANLVP--RRDQLEAFEVAKKRNTIAIMDTGSGKTLIAILLIKETGQA 93
Query: 63 LRKPS-PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
+R + VFL P V L Q + IK++TDL+V +Y+G GVD W+ +W++E+S ++
Sbjct: 94 IRSSGVKKLIVFLAPTVHL---QCKNIKLNTDLQVEEYYGSKGVDTWNLKSWQKEISDND 150
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
V+VMTPQILLD R ++ + MI ++++DECH A G H YA IM EFYH+ E P
Sbjct: 151 VMVMTPQILLDAFRKAFLSIEMICLMVIDECHWASGNHPYAKIMAEFYHQANEK-----P 205
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
+IFGMTASP+ + SS +I DLE +++S+ Y + + +IP + +FY
Sbjct: 206 KIFGMTASPVGKRGVSSTLVCEGQISDLENILDSRSYVVKDRTEMDVYIPSAKESCRFYD 265
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAEL--IRKKVSKINSTLLYCLSEL 299
HAL E + + S D + + + +++S + +LYCL +L
Sbjct: 266 PARF-HALSLKPKIEASWSKCDVLLSEFQSDYKDMDQKFKALHQRMSNELAKILYCLEDL 324
Query: 300 GVWLALKAAE 309
G+ A +AA+
Sbjct: 325 GLLCAYEAAK 334
>gi|449532911|ref|XP_004173421.1| PREDICTED: endoribonuclease Dicer homolog 2-like, partial [Cucumis
sativus]
Length = 307
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/300 (67%), Positives = 249/300 (83%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
VLEAITTKKCQE F+LESLETLGDSFLKYA Q LF+T+QN+HEGLL++KK+RI+SNAAL
Sbjct: 1 VLEAITTKKCQEKFNLESLETLGDSFLKYATGQHLFRTFQNDHEGLLTLKKDRIVSNAAL 60
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
+ GCE K+ GFIR E+FDP+ W IPGD Y+L ++ LF+GRK+YV ++K+KSK +A
Sbjct: 61 RRRGCEHKISGFIRDEAFDPQNWDIPGDTHEVYQLREEVLFSGRKVYVQRKRKIKSKRIA 120
Query: 1101 DVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNY 1160
DVVEALIGA+LSTGGE + FL+RIGI+V+F VPY+R F+V +L+NV HLESLL Y
Sbjct: 121 DVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFDFVPYERPFRVDVHKLINVGHLESLLKY 180
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
+F D SLL+EA+THGSYMLPEIPRCYQRLEFLGD+VLDY ITV+LYNKYPG++P LTDM
Sbjct: 181 TFNDRSLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVLDYAITVHLYNKYPGMTPELLTDM 240
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPK 1280
RSASV+NDCY+ +++K LHK ILH SH+L+K I+ V +FE LS +T+GWES SFPK
Sbjct: 241 RSASVSNDCYSRTALKAQLHKSILHCSHDLHKHISSAVQNFETLSSEATYGWESEISFPK 300
>gi|296089027|emb|CBI38730.3| unnamed protein product [Vitis vinifera]
Length = 1474
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 303/889 (34%), Positives = 443/889 (49%), Gaps = 132/889 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A K+NTI FLETG+GKTLIA++L+RS + L + +AVFLVPKV L
Sbjct: 253 ARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVPKVPL 312
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E VLVMT QILL+ LR S K
Sbjct: 313 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQILLNILRHSIIK 372
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K SS+
Sbjct: 373 MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKRPSVFGMTASPVNLKGVSSQV 429
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA------ 254
D KI +LE+ ++S V T L +P + Y +L+ +
Sbjct: 430 DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEQIKQMELAV 489
Query: 255 -------------------DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
D A EL+ + ++ A LI +K+ IN Y
Sbjct: 490 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI-QKLRAIN----YA 544
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS------------DASQ 341
L ELG W A K A++ ++ ++D A QLD F E+ + K S D +
Sbjct: 545 LGELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVSDKDK 604
Query: 342 ALV-----------------------TYVPSGAEWS---IGDDSKFNLDSGLLTEKIVCL 375
+V ++V SG E IG + G +T K+ L
Sbjct: 605 KVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIG----AAVADGKVTPKVQSL 660
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
++ LL+Y+ ED R IIFVERV+ A+VL + +EL P K + G+N+ + ++ +
Sbjct: 661 VKILLKYQQTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFIKCASLIGHNNSQEMRTCQ 719
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q+ I + FR G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SD
Sbjct: 720 MQDTIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 778
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVES 550
Y+LMV+ G+ + + L N S +RKE + L + + D Y VES
Sbjct: 779 YILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVES 838
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQ 603
TG I +L+S+V LI+FYCS+LPSD Y P+F + + C L LP N P +
Sbjct: 839 TGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 898
Query: 604 TVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV----EKHDAQKRGNE-PYN 656
+ +++ +QA CL ACKKLH++GA TD LLPD EK D G+ P
Sbjct: 899 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGT 958
Query: 657 AEHPIYFPPELVN----------QSPQDTKITYHCYLIELKQHFNYDIS-------ARNI 699
A H ++P + N + ++ H Y+ +K N+ S +
Sbjct: 959 ARHREFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVK-CVNFGSSKDPFLTQVSDF 1017
Query: 700 VLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
V+ EL++E+ ++ DL + R +T +L G I + +Q+ + F + L +++D
Sbjct: 1018 VVLFGNELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLKSFHVRLMSIVLD 1077
Query: 759 HNLDKLNEILDGFELRDNLEIDYLLLPSTG-------QLIDWKTVATVL 800
+++ D + YL +P G + IDW V ++
Sbjct: 1078 VDVEPSTTPWDPAKA-------YLFVPVVGDKSEDPIRQIDWDIVERII 1119
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 132/243 (54%), Gaps = 21/243 (8%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + V + A + F R G + ++Y +Y ++YG++L + ++PL
Sbjct: 1223 IVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADYYRQKYGVELIYKQQPL 1282
Query: 893 LNGRRIFHVQNYLS------KCRQQKQKEPSKISFE--LPPELCRIIMAPISLSTFYSFT 944
+ GR + + +N LS + + + E ++ LPPELC + P+ S S
Sbjct: 1283 IRGRGVSYCKNLLSPRFEHSEAHEGESDETLDKTYYVFLPPELC--FVHPLPGSLVRSAQ 1340
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLAV LK+++ N +P K+LEA+T CQE F E E LGD
Sbjct: 1341 RLPSIMRRVESMLLAVQLKDVI------NYPVPAAKILEALTAASCQETFCYERAELLGD 1394
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 1395 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQADRFAPSRWA 1454
Query: 1065 IPG 1067
PG
Sbjct: 1455 APG 1457
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
L+ ++NY +L EALT S + CY+R E LGDA L ++++ +L+ KYP
Sbjct: 1357 QLKDVINYPVPAAKIL-EALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1412
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
G LT MR V+N S++ GL +I
Sbjct: 1413 HEGQLTRMRQQMVSNMVLYQSALCKGLQSYI 1443
>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
Length = 1971
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 303/889 (34%), Positives = 443/889 (49%), Gaps = 132/889 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A K+NTI FLETG+GKTLIA++L+RS + L + +AVFLVPKV L
Sbjct: 312 ARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVPKVPL 371
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E VLVMT QILL+ LR S K
Sbjct: 372 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQILLNILRHSIIK 431
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K SS+
Sbjct: 432 MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKRPSVFGMTASPVNLKGVSSQV 488
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA------ 254
D KI +LE+ ++S V T L +P + Y +L+ +
Sbjct: 489 DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEQIKQMELAV 548
Query: 255 -------------------DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
D A EL+ + ++ A LI +K+ IN Y
Sbjct: 549 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI-QKLRAIN----YA 603
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS------------DASQ 341
L ELG W A K A++ ++ ++D A QLD F E+ + K S D +
Sbjct: 604 LGELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVSDKDK 663
Query: 342 ALV-----------------------TYVPSGAEWS---IGDDSKFNLDSGLLTEKIVCL 375
+V ++V SG E IG + G +T K+ L
Sbjct: 664 KVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIG----AAVADGKVTPKVQSL 719
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
++ LL+Y+ ED R IIFVERV+ A+VL + +EL P K + G+N+ + ++ +
Sbjct: 720 VKILLKYQQTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFIKCASLIGHNNSQEMRTCQ 778
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q+ I + FR G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SD
Sbjct: 779 MQDTIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 837
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVES 550
Y+LMV+ G+ + + L N S +RKE + L + + D Y VES
Sbjct: 838 YILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVES 897
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQ 603
TG I +L+S+V LI+FYCS+LPSD Y P+F + + C L LP N P +
Sbjct: 898 TGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 957
Query: 604 TVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV----EKHDAQKRGNE-PYN 656
+ +++ +QA CL ACKKLH++GA TD LLPD EK D G+ P
Sbjct: 958 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGT 1017
Query: 657 AEHPIYFPPELVN----------QSPQDTKITYHCYLIELKQHFNYDIS-------ARNI 699
A H ++P + N + ++ H Y+ +K N+ S +
Sbjct: 1018 ARHREFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVK-CVNFGSSKDPFLTQVSDF 1076
Query: 700 VLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
V+ EL++E+ ++ DL + R +T +L G I + +Q+ + F + L +++D
Sbjct: 1077 VVLFGNELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLKSFHVRLMSIVLD 1136
Query: 759 HNLDKLNEILDGFELRDNLEIDYLLLPSTG-------QLIDWKTVATVL 800
+++ D + YL +P G + IDW V ++
Sbjct: 1137 VDVEPSTTPWDPAKA-------YLFVPVVGDKSEDPIRQIDWDIVERII 1178
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 222/609 (36%), Positives = 322/609 (52%), Gaps = 78/609 (12%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + V + A + F R G + ++Y +Y ++YG++L + ++PL
Sbjct: 1282 IVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADYYRQKYGVELIYKQQPL 1341
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVP 947
+ GR + + +N LS + + E + + LPPELC + P+ S S +P
Sbjct: 1342 IRGRGVSYCKNLLSPRFEHSEGESDETLDKTYYVFLPPELC--FVHPLPGSLVRSAQRLP 1399
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
SIM R++S+LLAV LK+++ N +P K+LEA+T CQE F E E LGD++L
Sbjct: 1400 SIMRRVESMLLAVQLKDVI------NYPVPAAKILEALTAASCQETFCYERAELLGDAYL 1453
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1454 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQADRFAPSRWAAPG 1513
Query: 1068 ------------------------------DNSGSYELNDDSLFNGRKIYVTGRKKV-KS 1096
D G +DD + +G + +V S
Sbjct: 1514 VLPVFDEDTKETESSLFDHERPFSETAPGNDRHGD-GYDDDEMEDGELESDSSSYRVLSS 1572
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----------VNVPYQRQFQVHA 1145
KT+ADVVEALIG + GG+N + IGI+V+F NVP
Sbjct: 1573 KTLADVVEALIGVYYVEGGKNAANHLMKWIGIQVEFDPEDIVCATGPCNVPES------I 1626
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
R VN LE LN F + LL+EA+TH S + CYQRLEF+GDAVLD+LIT +L
Sbjct: 1627 LRSVNFDTLEGALNIKFNNRGLLIEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHL 1685
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV----DSF 1261
+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+I V D
Sbjct: 1686 FFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHIHLRHGSSALEKQIRDFVKEVQDEL 1745
Query: 1262 EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
K S FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+
Sbjct: 1746 SKPGFNS-FGLGDCKA-PKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETL 1803
Query: 1322 RFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
HPVREL E CQ+ ++ A+R SG A TVEV +G + KK A+K+A
Sbjct: 1804 PMHPVRELQERCQQQAEGLEYK-ATR-SGNLA-TVEVFIDGVQI-GIAQNPQKKMAQKLA 1859
Query: 1382 CKEVLKSLR 1390
+ L L+
Sbjct: 1860 ARNALVVLK 1868
>gi|115459356|ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza sativa Japonica Group]
Length = 1090
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 291/903 (32%), Positives = 464/903 (51%), Gaps = 75/903 (8%)
Query: 543 EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMGI-CTLYLPNNC 600
E+ Y V++TG + + SVSL++ YC LP D +F P+P F +I+ GI C L LP N
Sbjct: 1 ENIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNA 60
Query: 601 PIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE 658
+ Q + K+ ACL+AC KLH++GALTD LLP K+ N N
Sbjct: 61 AFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKV 120
Query: 659 ---------HPIYFPPELVNQSPQDTKIT-------YHCYLIELKQHFNYDISARNIVLA 702
H + P L P K+ Y+ I + + Y + ++
Sbjct: 121 EDDSLREELHEMLIPAVL---KPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINP 177
Query: 703 MRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNL 761
+ E E+ + DL + RGR+ +KHLG+I +++L +FQ ++++D +
Sbjct: 178 LPVEAET----LQVDLHLARGRIVKAGIKHLGKIAFEKEKMMLAHKFQEMCLKILLDRSE 233
Query: 762 DKLNEILDGFELRDNLEID---YLLLPSTGQ------LIDWKTV----ATVLFPRDNGSK 808
+ G ++ LEI+ YLLLP + +IDW V ++ +F
Sbjct: 234 FTSPHVKLGNDV--TLEINSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVS 291
Query: 809 HNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNG 868
+ + S+ + R++ G + S+V +PHN + + G+L +NA ++ ++G
Sbjct: 292 VHASYSSNESLRLL---DGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA---WSEHSG 345
Query: 869 SVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL----SKCRQQKQKEPSKISFELP 924
+ TY +H++ER+ I+L +PLL ++IF+++N L + + + +E + ELP
Sbjct: 346 A--TYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVELP 403
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PELC + + S S + +PS+M+RL++LL+A+ LK+++L + I +LEA
Sbjct: 404 PELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEA 463
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
+TT+KC E LE E LGD+FLKY + F TY+ EG L+ ++ +++N+ L +L
Sbjct: 464 LTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELS 523
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSG------------SYELNDDSLFNGRKIYVTGRK 1092
+KL +IR + F+P + PG +++ D+ N
Sbjct: 524 IRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLHQMDIHPDNRENCNLRCTRSHH 583
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL---- 1148
+ K +ADVVE+LIGAFL GG FL IGI VDF N R + L
Sbjct: 584 WLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMD 643
Query: 1149 -VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++ LE L+ Y F+ LL++A H S+ CYQRLEFLGDAVL+Y+IT YLY+
Sbjct: 644 YTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-QHSGGCYQRLEFLGDAVLEYVITSYLYS 702
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
YP + PG +TD+RS +V ND A ++V+ +HKH++ S+ L I+ + + KLS
Sbjct: 703 TYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAIS-KFEMYVKLSNS 761
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
E + PKALGDI+ES GA+ +DSG N V++ + LL+P++T M +P+R
Sbjct: 762 EKDLLEE-PACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMR 820
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
EL E CQ + F + P + G+ V VEV ++ T + + K A+K A +E L
Sbjct: 821 ELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLS 880
Query: 1388 SLR 1390
L+
Sbjct: 881 KLK 883
>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1942
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 304/906 (33%), Positives = 451/906 (49%), Gaps = 138/906 (15%)
Query: 9 DTTEEVSADTLP--FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
D E + + +P AR YQL+ LE A ++NTI FLETG+GKTLIA++L++S L K
Sbjct: 271 DKKSEEAKERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLHKQ 330
Query: 67 SP-FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM 125
+ +AVFLVPKV LV QQAE I+ T +VG Y G+MG DFWD W+ E VLVM
Sbjct: 331 NKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVM 390
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFG 185
T QILL+ LR S K+ I +LILDECHHA KH Y+ +M+EFYH T N P +FG
Sbjct: 391 TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKENRPSVFG 447
Query: 186 MTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEI 245
MTASP+ K SS+ D KI +LE+ ++S V T L +P + +YD+
Sbjct: 448 MTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVV--VEYDKA 505
Query: 246 PHALYTH---------------------------LADELAMIELKHTRSLENLDLNEAQA 278
Y H D A EL+ + ++ A
Sbjct: 506 ASLCYLHEQIKQMEVEVEEAAKCSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAA 565
Query: 279 ELIRKKVSKINSTLLYCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFG 336
LI +K+ +N Y L ELG W A K A++ ++ ++D A QLD F ET + K
Sbjct: 566 NLI-QKLRAVN----YALGELGQWCAYKVAQSFLAALQNDERANYQLDVKFQETYLSKVV 620
Query: 337 S-------------------DASQALV----------------TYVPSGAEWS---IGDD 358
S D+ V ++V SG E IG
Sbjct: 621 SLLKCQLSEGAVSDKNAGIDDSENGAVQSGSEHEEMEEGELPDSHVVSGGEHVDVIIG-- 678
Query: 359 SKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ G +T K+ LI+ LL+Y+ ED R IIFVERV++A+VL + +EL P K
Sbjct: 679 --AAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAEL-PSLSFVK 735
Query: 419 TKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ G+N+ + ++ + Q+ I + FR G V ++VATS+ EEGLD++ CN+VI FD ++T
Sbjct: 736 CASLIGHNNSQEMRTYQMQDTIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 794
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNN 538
V ++IQSRGRAR SDY+LMV+ + + ++ L N S +RKE + L +
Sbjct: 795 VLAYIQSRGRARKPGSDYILMVERDNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTS 854
Query: 539 HMYGED-----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--- 590
+ D Y V+STG + +L+S+V LI+FYCS+LPSD Y P+F + +
Sbjct: 855 RLISVDTRPGTVYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 914
Query: 591 ----ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV-- 642
C L LP N P + + +++ +QA CL ACKKLH++GA TD LLPD
Sbjct: 915 PTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGG 974
Query: 643 --EKHDAQKRGNE-PYNAEHPIYFPPELVN-----------QSPQDTKITYHCYLIELK- 687
EK + G+ P A H ++P + + + ++K+ H Y+ +K
Sbjct: 975 EKEKDEQTDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACNNSKL-LHLYMYAVKC 1033
Query: 688 QHFNYD-----ISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQ 741
++ + N + EL++E+ ++ DL + R T +L G I + +Q
Sbjct: 1034 ENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTVTTKSSLVFRGLISITESQ 1093
Query: 742 VLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQ-------LIDWK 794
+ + F + L +++D +++ D + YL +P G IDW
Sbjct: 1094 LASLKSFHVRLMSIVLDVDVEPSTTPWDPAKA-------YLFVPMVGDKSVDPTNQIDWH 1146
Query: 795 TVATVL 800
V T++
Sbjct: 1147 LVETII 1152
Score = 326 bits (836), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 211/576 (36%), Positives = 310/576 (53%), Gaps = 69/576 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++A + F R G + ++Y +Y+++YG+ L + ++PL
Sbjct: 1257 IVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYRQQPL 1316
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVP 947
+ GR + + +N LS + + E + + LPPELC ++ P+ S +P
Sbjct: 1317 IRGRGVSYCKNLLSPRFEHSEGESEETHDKTYYVFLPPELC--LVHPLPGSLVRGAQRLP 1374
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
SIM R++S+LLAV LKNM+ N + K+LEA+T CQE F E E LGD++L
Sbjct: 1375 SIMRRVESMLLAVQLKNMI------NYPVQASKILEALTAASCQETFCYERAELLGDAYL 1428
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1429 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPG 1488
Query: 1068 ----------DNSGSY----------------------ELNDDSLFNGRKIYVTGRKKVK 1095
D S E+ D L + Y + +
Sbjct: 1489 VLPVFDEDTKDGESSLFDQERSISKIERMDCHTDGYEDEMEDGELESDSSSY----RVLS 1544
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY---QRQFQVHAE--RLVN 1150
SKT+ADVVEALIG + GG+N + +GI+++F ++ F V R V+
Sbjct: 1545 SKTLADVVEALIGVYYVEGGKNAANHLMKWMGIQIEFDPDTMDCTRKPFNVPDSILRSVD 1604
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
LE LN F+D LLVE++TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1605 FDALEGALNMKFKDRGLLVESITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1663
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV----DSFEKLSL 1266
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+I V D K
Sbjct: 1664 NLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQDELSKPGF 1723
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
S FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPV
Sbjct: 1724 NS-FGLGDCKA-PKVLGDILESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPV 1781
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
REL E CQ+ ++ ASRI A TVEV +G
Sbjct: 1782 RELQERCQQQAEGLEYK-ASRIGNLA--TVEVFIDG 1814
>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1944
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 302/890 (33%), Positives = 444/890 (49%), Gaps = 134/890 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP-FVAVFLVPKVVL 80
AR YQL+ LE + ++NTI FLETG+GKTLIA++L++S L+K + +AVFLVPKV L
Sbjct: 288 ARQYQLDVLEQSKRKNTIAFLETGAGKTLIAVLLIKSIQDSLQKQNKKMLAVFLVPKVPL 347
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E VLVMT QILL+ LR S K
Sbjct: 348 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIK 407
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T N P +FGMTASP+ K SS+
Sbjct: 408 MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKENRPSVFGMTASPVNLKGVSSQV 464
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTH-------- 252
D KI +LE+ ++S V T L +P + +YD+ Y H
Sbjct: 465 DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVV--VEYDKAASLCYLHEQIKQMEV 522
Query: 253 -------------------LADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
D A EL+ + ++ A LI +K+ +N
Sbjct: 523 EVEEAAKYSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI-QKLRAVN---- 577
Query: 294 YCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKF---------------- 335
Y L ELG W A K A + ++ ++D A QLD F ET + K
Sbjct: 578 YALGELGQWCAYKVALSFLAALQNDERANYQLDVKFQETYLSKVVSLLKCQLSEGAASDK 637
Query: 336 --GSDASQALV-----------------TYVPSGAEWS---IGDDSKFNLDSGLLTEKIV 373
G D S+ ++V SG E IG + G +T K+
Sbjct: 638 NAGIDDSENGAAQSGSEHEEMEEGELPDSHVVSGGEHVDVIIG----AAVADGKVTPKVQ 693
Query: 374 CLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS 433
LI+ LL+Y+ ED R IIFVERV++A+VL + +EL P K + G+N+ + ++
Sbjct: 694 ALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAEL-PSLSFVKCASLIGHNNSQEMRT 752
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
+ Q+ I + FR G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR
Sbjct: 753 YQMQDTIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 811
Query: 494 SDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHV 548
SDY+LMV+ + + ++ L N S +RKE + L + + D Y V
Sbjct: 812 SDYILMVERDNLSHEAFLRNAKNSEETLRKEAIERTDLSHLKDTSRLISVDTRPGTVYQV 871
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCP 601
+STG + +L+S+V LI+FYCS+LPSD Y P+F + + C L LP N P
Sbjct: 872 KSTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 931
Query: 602 IQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV----EKHDAQKRGNE-P 654
+ + +++ +QA CL ACKKLH++GA TD LLPD EK + G+ P
Sbjct: 932 FENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEREKDEQTDEGDPLP 991
Query: 655 YNAEHPIYFPPELVN-------QSPQDTKITY---HCYLIELK-QHFNYD-----ISARN 698
A H ++P + + S +D Y H Y+ +K ++ + N
Sbjct: 992 GTARHREFYPEGVADILKGEWILSEKDACNNYKLLHLYMYAVKCENLGHSKDPFLTQVSN 1051
Query: 699 IVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
+ EL++E+ ++ DL + R T +L G I + +Q+ + F + L +++
Sbjct: 1052 FAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFSGLINITESQLASLKSFHVRLMSIVL 1111
Query: 758 DHNLDKLNEILDGFELRDNLEIDYLLLPSTG-------QLIDWKTVATVL 800
D +++ D + YL +P G IDW V T++
Sbjct: 1112 DVDVEPSTTPWDPAKA-------YLFVPMVGDKSVDPMNQIDWHLVETII 1154
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 311/575 (54%), Gaps = 67/575 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++A + F R G + ++Y +Y+++YG+ L + ++PL
Sbjct: 1259 IVTAAHSGKRFYVDSICYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVNLIYKQQPL 1318
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVP 947
+ GR + + +N LS + + E +I + LPPELC ++ P+ S +P
Sbjct: 1319 IRGRGVSYCKNLLSPRFEHSEGESEEIHDKTYYVFLPPELC--LVHPLPGSLVRGAQRLP 1376
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
SIM R++S+LLAV LKNM+ N + K+L A+T CQE F E E LGD++L
Sbjct: 1377 SIMRRVESMLLAVQLKNMI------NYPVLASKILGALTAASCQETFCYERAELLGDAYL 1430
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1431 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPG 1490
Query: 1068 --------------------------------DNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
N E+ D L + Y + +
Sbjct: 1491 VLPVFDEDTKDGESSLFDQERSISKIERMDCHTNGYEDEMEDGELESDSSSY----RVLS 1546
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ---RQFQVHAE--RLVN 1150
SKT+ADVVEALIG + GG+N + IGI+++F + + F V R V+
Sbjct: 1547 SKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQIEFDPDTMECTKKPFNVPDSILRSVD 1606
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
LE LN F D LLVE++TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1607 FDALEGALNMKFNDRGLLVESITHASRPSSGV-SCYQRLEFVGDAVLDHLITRHLFFTYT 1665
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE-KLSLG-- 1267
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+I V + +LS
Sbjct: 1666 NLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQVELSKPGF 1725
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
++FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVR
Sbjct: 1726 NSFGLGDCKA-PKVLGDIVESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVR 1784
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
EL E CQ+ ++ ASRI A TVEV +G
Sbjct: 1785 ELQERCQQQAEGLEYK-ASRIGNLA--TVEVFIDG 1816
>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
Length = 1986
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 301/889 (33%), Positives = 447/889 (50%), Gaps = 132/889 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A K+NTI FLETG+GKTLIA++L++S Y L + +AVFLVPKV L
Sbjct: 327 ARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPL 386
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S K
Sbjct: 387 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIK 446
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K S++
Sbjct: 447 MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKERRPSVFGMTASPVNLKGVSNQI 503
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP-----HALYTHLA- 254
D KI +LE+ ++S V T L +P + +YD+ H L +
Sbjct: 504 DCAIKIRNLESKLDSTVCTIKDRKELEKHVPMPSEVV--VEYDKAATLWSLHELIKQIEV 561
Query: 255 ---------------------DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
D A EL+ + ++ A LI +K+ IN
Sbjct: 562 EVEEAAKLSSRRSKWQLMGARDAGAREELRQVYGVSERTESDGAANLI-QKLRAIN---- 616
Query: 294 YCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS----DASQALVTYV 347
Y L ELG W A K A++ ++ ++D A QLD F E+ + K + S+ V+
Sbjct: 617 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLNKVVALLQCQLSEGAVSDK 676
Query: 348 PSGAEWSIGD--DSKFNLD----------------------------SGLLTEKIVCLIE 377
A S D +++ NLD G +T K+ L++
Sbjct: 677 DGIASVSEEDVANTRSNLDEIEEGELLDSHVVSGGEHVDEIIGAAVADGKVTPKVQSLVK 736
Query: 378 SLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
LL+Y+ ED R IIFVERV++A+VL + +EL P K+ + G+N+ ++ + Q
Sbjct: 737 ILLKYQYTEDFRAIIFVERVVSALVLPKVFAEL-PSLSFIKSASLIGHNNSQDMRTCQMQ 795
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
+ I +FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+
Sbjct: 796 DTI-SKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYI 854
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEV-----LSHASLPCSPLNNHMYGEDFYHVESTG 552
LMV+ G+ + + L N S +RKE LSH ++ + Y VESTG
Sbjct: 855 LMVERGNLSHAAFLRNARNSEETLRKEAVERTDLSHLEDTSRLISMDTTPDTVYQVESTG 914
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI---NKEMG----ICTLYLPNNCPIQTV 605
+ +L+S+V L++FYCS+LPSD Y P+F + K G C L LP N P + +
Sbjct: 915 AVVSLNSAVGLVHFYCSQLPSDRYSILRPEFVMVRHEKPGGPTEYSCKLQLPCNAPFEDL 974
Query: 606 IAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAE 658
+++ +QA CL ACKKLH++GA TD LLPD + + N+ P A
Sbjct: 975 EGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEKVEQNDDGDPLPGTAR 1034
Query: 659 HPIYFPPELVN-----------QSPQDTKITYHCYLIEL--------KQHFNYDISARNI 699
H ++P + N + D+K H Y+ + K F +S N
Sbjct: 1035 HREFYPEGVANILQGEWILTGRDTFSDSKF-LHLYMYTVQCVNVGSSKDLFLTQVS--NF 1091
Query: 700 VLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
+ +EL++E+ ++ DL + R T +L G + +Q+ + F + L +++D
Sbjct: 1092 AVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLASLKSFHVRLMSIVLD 1151
Query: 759 HNLDKLNEILDGFELRDNLEIDYLLLPSTG-------QLIDWKTVATVL 800
+++ D + YL +P G + IDW V ++
Sbjct: 1152 VDVEPTTTPWDPAKA-------YLFVPVVGDKSEDPVKEIDWVMVRRII 1193
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 325/601 (54%), Gaps = 62/601 (10%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + A + F R G + ++Y +Y+++YG++L + +PL
Sbjct: 1297 IVTAAHSGKRFYVDSIRYDTTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPL 1356
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVP 947
+ GR + + +N LS + + E + + LPPELC ++ P+ S +P
Sbjct: 1357 IRGRGVSYCKNLLSPRFEHAENESEETLDKTYYVYLPPELC--LVHPLPGSLVRGAQRLP 1414
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
SIM R++S+LLA+ LK+M+ N +P K+LEA+T CQE F E E LGD++L
Sbjct: 1415 SIMRRVESMLLAIQLKHMI------NYPVPASKILEALTAASCQETFCYERAELLGDAYL 1468
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ S+ LF Y HEG L+ +++++SN L + +KL +I+ + F P W PG
Sbjct: 1469 KWVVSRFLFLKYPRKHEGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAPSRWAAPG 1528
Query: 1068 ----------DNSGSYELNDDSLFNGRK-------IYVTGR-------------KKVKSK 1097
D S+ D S +G ++ G + + SK
Sbjct: 1529 VLPVYDEDMKDGESSFFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSSK 1588
Query: 1098 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ---RQFQVHAE--RLVNVR 1152
T+ADVVEALIG + GG+ + IGIKV+F + RQ + R V+
Sbjct: 1589 TLADVVEALIGVYYVEGGKTAANHLMKWIGIKVEFDAGEVECGTRQSNLPESILRSVDFD 1648
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE LN F+D LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y L
Sbjct: 1649 ALEGALNIKFQDRGLLVEAITHASRPSCGVS-CYQRLEFVGDAVLDHLITRHLFFTYTDL 1707
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF--EKLSLG-ST 1269
PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+I V E L G ++
Sbjct: 1708 PPGRLTDLRAAAVNNENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNS 1767
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVREL
Sbjct: 1768 FGLGDCKA-PKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVREL 1826
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E CQ+ ++ A+RI A TVEV +G + KK A+K+A + L L
Sbjct: 1827 QERCQQQAEGLEYK-ATRIGNLA--TVEVFIDGVQI-GIAQNPQKKMAQKLAARNALAVL 1882
Query: 1390 R 1390
+
Sbjct: 1883 K 1883
>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
[Cucumis sativus]
Length = 1987
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 301/889 (33%), Positives = 447/889 (50%), Gaps = 132/889 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A K+NTI FLETG+GKTLIA++L++S Y L + +AVFLVPKV L
Sbjct: 328 ARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPL 387
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S K
Sbjct: 388 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIK 447
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K S++
Sbjct: 448 MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKERRPSVFGMTASPVNLKGVSNQI 504
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP-----HALYTHLA- 254
D KI +LE+ ++S V T L +P + +YD+ H L +
Sbjct: 505 DCAIKIRNLESKLDSTVCTIKDRKELEKHVPMPSEVV--VEYDKAATLWSLHELIKQIEV 562
Query: 255 ---------------------DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
D A EL+ + ++ A LI +K+ IN
Sbjct: 563 EVEEAAKLSSRRSKWQLMGARDAGAREELRQVYGVSERTESDGAANLI-QKLRAIN---- 617
Query: 294 YCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS----DASQALVTYV 347
Y L ELG W A K A++ ++ ++D A QLD F E+ + K + S+ V+
Sbjct: 618 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLNKVVALLQCQLSEGAVSDK 677
Query: 348 PSGAEWSIGD--DSKFNLD----------------------------SGLLTEKIVCLIE 377
A S D +++ NLD G +T K+ L++
Sbjct: 678 DGIASVSEEDVANTRSNLDEIEEGELLDSHVVSGGEHVDEIIGAAVADGKVTPKVQSLVK 737
Query: 378 SLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
LL+Y+ ED R IIFVERV++A+VL + +EL P K+ + G+N+ ++ + Q
Sbjct: 738 ILLKYQYTEDFRAIIFVERVVSALVLPKVFAEL-PSLSFIKSASLIGHNNSQDMRTCQMQ 796
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
+ I +FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+
Sbjct: 797 DTI-SKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYI 855
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEV-----LSHASLPCSPLNNHMYGEDFYHVESTG 552
LMV+ G+ + + L N S +RKE LSH ++ + Y VESTG
Sbjct: 856 LMVERGNLSHAAFLRNARNSEETLRKEAVERTDLSHLEDTSRLISMDTTPDTVYQVESTG 915
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI---NKEMG----ICTLYLPNNCPIQTV 605
+ +L+S+V L++FYCS+LPSD Y P+F + K G C L LP N P + +
Sbjct: 916 AVVSLNSAVGLVHFYCSQLPSDRYSILRPEFVMVRHEKPGGPTEYSCKLQLPCNAPFEDL 975
Query: 606 IAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAE 658
+++ +QA CL ACKKLH++GA TD LLPD + + N+ P A
Sbjct: 976 EGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEKVEQNDDGDPLPGTAR 1035
Query: 659 HPIYFPPELVN-----------QSPQDTKITYHCYLIEL--------KQHFNYDISARNI 699
H ++P + N + D+K H Y+ + K F +S N
Sbjct: 1036 HREFYPEGVANILQGEWILTGRDTFSDSKF-LHLYMYTVQCVNVGSSKDLFLTQVS--NF 1092
Query: 700 VLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
+ +EL++E+ ++ DL + R T +L G + +Q+ + F + L +++D
Sbjct: 1093 AVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLASLKSFHVRLMSIVLD 1152
Query: 759 HNLDKLNEILDGFELRDNLEIDYLLLPSTG-------QLIDWKTVATVL 800
+++ D + YL +P G + IDW V ++
Sbjct: 1153 VDVEPTTTPWDPAKA-------YLFVPVVGDKSEDPVKEIDWVMVRRII 1194
Score = 334 bits (856), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 325/601 (54%), Gaps = 62/601 (10%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + A + F R G + ++Y +Y+++YG++L + +PL
Sbjct: 1298 IVTAAHSGKRFYVDSIRYDTTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPL 1357
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVP 947
+ GR + + +N LS + + E + + LPPELC ++ P+ S +P
Sbjct: 1358 IRGRGVSYCKNLLSPRFEHAENESEETLDKTYYVYLPPELC--LVHPLPGSLVRGAQRLP 1415
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
SIM R++S+LLA+ LK+M+ N +P K+LEA+T CQE F E E LGD++L
Sbjct: 1416 SIMRRVESMLLAIQLKHMI------NYPVPASKILEALTAASCQETFCYERAELLGDAYL 1469
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ S+ LF Y HEG L+ +++++SN L + +KL +I+ + F P W PG
Sbjct: 1470 KWVVSRFLFLKYPRKHEGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAPSRWAAPG 1529
Query: 1068 ----------DNSGSYELNDDSLFNG-------RKIYVTGR-------------KKVKSK 1097
D S+ D S +G ++ G + + SK
Sbjct: 1530 VLPVYDEDMKDGESSFFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSSK 1589
Query: 1098 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ---RQFQVHAE--RLVNVR 1152
T+ADVVEALIG + GG+ + IGIKV+F + RQ + R V+
Sbjct: 1590 TLADVVEALIGVYYVEGGKTAANHLMKWIGIKVEFDAGEVECGTRQSNLPESILRSVDFD 1649
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE LN F+D LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y L
Sbjct: 1650 ALEGALNIKFQDRGLLVEAITHASRPSCGVS-CYQRLEFVGDAVLDHLITRHLFFTYTDL 1708
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF--EKLSLG-ST 1269
PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+I V E L G ++
Sbjct: 1709 PPGRLTDLRAAAVNNENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNS 1768
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVREL
Sbjct: 1769 FGLGDCKA-PKVLGDIVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVREL 1827
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E CQ+ ++ A+RI A TVEV +G + KK A+K+A + L L
Sbjct: 1828 QERCQQQAEGLEYK-ATRIGNLA--TVEVFIDGVQI-GIAQNPQKKMAQKLAARNALAVL 1883
Query: 1390 R 1390
+
Sbjct: 1884 K 1884
>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
Length = 1962
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 286/840 (34%), Positives = 426/840 (50%), Gaps = 114/840 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ K ++VFLVPKV L
Sbjct: 242 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSKNRKLLSVFLVPKVPL 301
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S +
Sbjct: 302 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRHSIIR 361
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P IFGMTASP+ K SS+
Sbjct: 362 METIDLLILDECHHAVKKHPYSLVMSEFYHT---TPKDKRPAIFGMTASPVNLKGVSSQV 418
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPF------------------STAKFKFYKY 242
D KI +LET ++S V T L +P T K
Sbjct: 419 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIVAV 478
Query: 243 DEIPHA-------LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+E A + D A EL+ + ++ A LI K + IN Y
Sbjct: 479 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK-LRAIN----YT 533
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS---------------- 337
L+ELG W A K ++ ++ +SD Q+D F E+ + + S
Sbjct: 534 LAELGQWCAYKVGQSFLTALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 593
Query: 338 ---------------DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEY 382
+ + +V SG E + + + G +T K+ LI+ LL+Y
Sbjct: 594 AEVSKTENGNANDEMEEGELPDDHVVSGGE-HVDEVIGAAVADGKVTPKVQSLIKLLLKY 652
Query: 383 RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVE 442
+ D R I+FVERV+ A+VL + +EL P + + G+N+ + +S + Q+ I
Sbjct: 653 QHTSDFRAIVFVERVVAALVLPKVFAEL-PSLGFIRCASMIGHNNSQEMKSSQMQDTI-S 710
Query: 443 EFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS 502
+FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LMV+
Sbjct: 711 KFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVER 770
Query: 503 GDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATL 557
G+ + + L N S +RKE + L + + D Y VE+TG + +L
Sbjct: 771 GNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDTVPGTIYKVEATGAMVSL 830
Query: 558 SSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQG- 609
+S+V L++FYCS+LP D Y P+F + K C L LP N P + I +G
Sbjct: 831 NSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGP 888
Query: 610 ---NIKTLKQAACLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPI 661
+++ +QA CL ACKKLH++GA TD LLPD EK D G P A H
Sbjct: 889 VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKVDQDDEGEPVPGTARHRE 948
Query: 662 YFPPELVN----------QSPQDTKITYHCYLIEL--------KQHFNYDISARNIVLAM 703
++P + + + ++ +H Y+ + K F ++S I+
Sbjct: 949 FYPEGVADVLKGEWILSGKEICESSKLFHLYMYSVRCVDLGSSKDPFLTEVSEFAILFG- 1007
Query: 704 RTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
EL++E+ ++ DL V R +T +L G + + NQ+ ++F + L +++D +++
Sbjct: 1008 -NELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVE 1066
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 289/526 (54%), Gaps = 62/526 (11%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPI 935
RYG+ L ++PL+ GR + + +N LS +Q + + + LPPELC ++ P+
Sbjct: 1315 RYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETILDKTYYVFLPPELC--VVHPL 1372
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S S +PSIM R++S+LLAV LKN++ + IPT K+LEA+T CQE F
Sbjct: 1373 SGSLVRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFC 1426
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
E E LGD++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+
Sbjct: 1427 YERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQA 1486
Query: 1056 ESFDPKMWIIPG----------DNSGSY---------ELNDDSLFNGR------KIYVTG 1090
+ F P W PG D S+ E N D +G + ++
Sbjct: 1487 DRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSS 1546
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPYQR 1139
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 1547 YRVLSSKTLADVVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPES- 1605
Query: 1140 QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
+ ++ LE L + F++ LLVEA+TH S + CYQRLEF+GDAVLD+
Sbjct: 1606 -----VLKSIDFVGLERALKFEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1659
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K+I V
Sbjct: 1660 LITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVK 1719
Query: 1260 SFEKLSLG---STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
+ S ++FG + PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+
Sbjct: 1720 EVQTESSKPGFNSFGLGDCKA-PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMV 1778
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
TPET+ HPVREL E CQ+ ++ ASR SG A TVEV +G
Sbjct: 1779 TPETLPMHPVRELQERCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 1821
>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=AtDCL1; AltName:
Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
1; AltName: Full=Protein SUSPENSOR 1
gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1909
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 289/839 (34%), Positives = 427/839 (50%), Gaps = 112/839 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ + ++VFLVPKV L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S +
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIR 368
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P IFGMTASP+ K SS+
Sbjct: 369 METIDLLILDECHHAVKKHPYSLVMSEFYHT---TPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPF------------------STAKFKFYKY 242
D KI +LET ++S V T L +P T K
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 243 DEIPHA-------LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+E A + D A EL+ + ++ A LI K + IN Y
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK-LRAIN----YT 540
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS-------DASQALVTY 346
L+ELG W A K ++ +S +SD Q+D F E+ + + S + + A
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 347 VPSGA-----------EWSIGDDSKFN------------LDSGLLTEKIVCLIESLLEYR 383
G E + DD + + G +T K+ LI+ LL+Y+
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
D R I+FVERV+ A+VL + +EL P + + G+N+ + +S + Q+ I +
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAEL-PSLSFIRCASMIGHNNSQEMKSSQMQDTI-SK 718
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LMV+ G
Sbjct: 719 FRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERG 778
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLS 558
+ + + L N S +RKE + L + + D Y VE+TG + +L+
Sbjct: 779 NVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLN 838
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQG-- 609
S+V L++FYCS+LP D Y P+F + K C L LP N P + I +G
Sbjct: 839 SAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGPV 896
Query: 610 --NIKTLKQAACLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPIY 662
+++ +QA CL ACKKLH++GA TD LLPD EK D G P A H +
Sbjct: 897 CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREF 956
Query: 663 FPP--------ELVNQSPQ--DTKITYHCYLIEL--------KQHFNYDISARNIVLAMR 704
+P E V+ + ++ +H Y+ + K F ++S I+
Sbjct: 957 YPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFG-- 1014
Query: 705 TELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
EL++E+ ++ DL V R +T +L G + + NQ+ ++F + L +++D +++
Sbjct: 1015 NELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVE 1073
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 312/573 (54%), Gaps = 67/573 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++A + F R G + TY +Y+++YG+ L ++PL
Sbjct: 1215 IVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPL 1274
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPS 948
+ GR + + +N LS +Q + + + LPPELC ++ P+S S +PS
Sbjct: 1275 IKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELC--VVHPLSGSLIRGAQRLPS 1332
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
IM R++S+LLAV LKN++ + IPT K+LEA+T CQE F E E LGD++LK
Sbjct: 1333 IMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYERAELLGDAYLK 1386
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG- 1067
+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1387 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 1446
Query: 1068 ---------DNSGSY---------ELNDDSLFNGR------KIYVTGRKKVKSKTVADVV 1103
D S+ E N D +G + ++ + + SKT+ADVV
Sbjct: 1447 PPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVV 1506
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPYQRQFQVHAERLVNVR 1152
EALIG + GG+ + IGI V+ VNVP + ++
Sbjct: 1507 EALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES------VLKSIDFV 1560
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y L
Sbjct: 1561 GLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTSL 1619
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG---ST 1269
PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K+I V + S ++
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
FG + PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+TPET+ HPVREL
Sbjct: 1680 FGLGDCKA-PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVREL 1738
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
E CQ+ ++ ASR SG A TVEV +G
Sbjct: 1739 QERCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 1768
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 289/839 (34%), Positives = 427/839 (50%), Gaps = 112/839 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ + ++VFLVPKV L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S +
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIR 368
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P IFGMTASP+ K SS+
Sbjct: 369 METIDLLILDECHHAVKKHPYSLVMSEFYHT---TPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPF------------------STAKFKFYKY 242
D KI +LET ++S V T L +P T K
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 243 DEIPHA-------LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+E A + D A EL+ + ++ A LI K + IN Y
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK-LRAIN----YT 540
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS-------DASQALVTY 346
L+ELG W A K ++ +S +SD Q+D F E+ + + S + + A
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 347 VPSGA-----------EWSIGDDSKFN------------LDSGLLTEKIVCLIESLLEYR 383
G E + DD + + G +T K+ LI+ LL+Y+
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
D R I+FVERV+ A+VL + +EL P + + G+N+ + +S + Q+ I +
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAEL-PSLSFIRCASMIGHNNSQEMKSSQMQDTI-SK 718
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LMV+ G
Sbjct: 719 FRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERG 778
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLS 558
+ + + L N S +RKE + L + + D Y VE+TG + +L+
Sbjct: 779 NVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLN 838
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQG-- 609
S+V L++FYCS+LP D Y P+F + K C L LP N P + I +G
Sbjct: 839 SAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGPV 896
Query: 610 --NIKTLKQAACLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPIY 662
+++ +QA CL ACKKLH++GA TD LLPD EK D G P A H +
Sbjct: 897 CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREF 956
Query: 663 FPP--------ELVNQSPQ--DTKITYHCYLIEL--------KQHFNYDISARNIVLAMR 704
+P E V+ + ++ +H Y+ + K F ++S I+
Sbjct: 957 YPEGVADVLKGEWVSSGKEVCESSKLFHLYMHNVRCVDFGSSKDPFLSEVSEFAILFG-- 1014
Query: 705 TELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
EL++E+ ++ DL V R +T +L G + + NQ+ ++F + L +++D +++
Sbjct: 1015 NELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVE 1073
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 312/573 (54%), Gaps = 67/573 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++A + F R G + TY +Y+++YG+ L ++PL
Sbjct: 1215 IVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPL 1274
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPS 948
+ GR + + +N LS +Q + + + LPPELC ++ P+S S +PS
Sbjct: 1275 IKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELC--VVHPLSGSLIRGAQRLPS 1332
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
IM R++S+LLAV LKN++ + IPT K+LEA+T CQE F E E LGD++LK
Sbjct: 1333 IMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYERAELLGDAYLK 1386
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG- 1067
+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1387 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 1446
Query: 1068 ---------DNSGSY---------ELNDDSLFNGR------KIYVTGRKKVKSKTVADVV 1103
D S+ E N D +G + ++ + + SKT+ADVV
Sbjct: 1447 PPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVV 1506
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPYQRQFQVHAERLVNVR 1152
EALIG + GG+ + IGI V+ VNVP + ++
Sbjct: 1507 EALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES------VLKSIDFV 1560
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y L
Sbjct: 1561 GLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTSL 1619
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG---ST 1269
PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K+I V + S ++
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
FG + PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+TPET+ HPVREL
Sbjct: 1680 FGLGDCKA-PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVREL 1738
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
E CQ+ ++ ASR SG A TVEV +G
Sbjct: 1739 QERCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 1768
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial [Medicago truncatula]
Length = 1939
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 301/912 (33%), Positives = 452/912 (49%), Gaps = 140/912 (15%)
Query: 4 VSMESDTTEEVSADTLPF----ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS- 58
+ +++ +E +T+P AR YQL+ LE A +NTI FLETG+GKTLIA++L++S
Sbjct: 198 MDIDNPIKQEKPKETVPVPEEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSI 257
Query: 59 YAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS 118
+ L + +AVFLVPKV LV QQAE I+ T +VG Y G+MG DFWD W+ E
Sbjct: 258 HETLHLQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFD 317
Query: 119 KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS 178
VLVMT QILL+ LR S K+ I +LILDECHHA KH Y+ +M+EFYH T
Sbjct: 318 TKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKE 374
Query: 179 NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK 238
P +FGMTASP+ K SS+ D KI +LE+ ++S V T L +P +
Sbjct: 375 KRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIV- 433
Query: 239 FYKYDEIPHALYTH---------------------------LADELAMIELKHTRSLENL 271
KYD+ Y H D A EL+ +
Sbjct: 434 -VKYDKAASLCYLHEQIKQMETEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSER 492
Query: 272 DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGE 329
++ A LI +K+ +N Y L ELG W A K A++ ++ ++D A QLD F E
Sbjct: 493 TESDGAANLI-QKLRAVN----YALGELGQWCAYKVAQSFLAALQNDERANYQLDVKFQE 547
Query: 330 TIIKKF------------------GSDASQALV------------------TYVPSGAEW 353
+ + K G D SQ ++V SG E
Sbjct: 548 SYLSKVVSLLKCQLSEGAISDKNDGVDDSQNGAAHSGSDEHEEIEEGELPDSHVVSGGEH 607
Query: 354 S---IGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL 410
IG + G +T K+ LI+ LL+Y+ +D R IIFVERV++A+VL + +E
Sbjct: 608 VDVIIG----AAVADGKVTPKVQALIKILLKYQNTDDFRAIIFVERVVSALVLPKVFAE- 662
Query: 411 LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
LP K + G+N+ + ++ + + I +FR G V ++VATS+ EEGLD++ CN+V
Sbjct: 663 LPSLSFVKCASLIGHNNSQEMRTHQMHDTIA-KFRDGRVTLLVATSVAEEGLDIRQCNVV 721
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV----- 525
I FD ++TV ++IQSRGRAR SDY+LMV+ G+ + ++ L+N S +R+E
Sbjct: 722 IRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLKNARNSEETLRREAIERTD 781
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
LSH ++ + E Y V+STG + +L+S+V L++FYCS+LPSD Y P+F +
Sbjct: 782 LSHLKDSSRLISVDTHPETMYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIM 841
Query: 586 NKEMG-------ICTLYLPNNCPIQTVIAQGNI-KTLKQAACLEACKKLHQIGALTDNLL 637
K C L LP N P + + +G I +++ A AC+KLH++GA TD LL
Sbjct: 842 EKHENSGGPTEYSCRLQLPCNAPFENL--EGPICSSIRLAQQASACRKLHEMGAFTDMLL 899
Query: 638 PDIVV----EKHDAQKRGNE-PYNAEHPIYFPPELVNQSPQDTKITYH--CYLIELKQHF 690
PD EK + G+ P A H ++P + + + ++ C +L +
Sbjct: 900 PDKGSGEEKEKAEQNDEGDALPGTARHREFYPEGVADILKGEWILSGKDACNNSKLLHLY 959
Query: 691 NYDISARNI--------------VLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRI 735
Y I N+ + TEL++E+ ++ DL + R T +L I
Sbjct: 960 MYTIKCENVGHSKDPFLTQVSDFAVLFGTELDAEVLSMSMDLFIARTVTTKASLVFRESI 1019
Query: 736 QLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTG------- 788
+ +Q+ + F + L +++D +++ D + YL +P G
Sbjct: 1020 DITESQLTSLKSFHVRLMSIVLDVDVEPSTTPWDPAKA-------YLFVPMVGDKSSDPM 1072
Query: 789 QLIDWKTVATVL 800
IDW V T++
Sbjct: 1073 NQIDWHLVETII 1084
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 284/533 (53%), Gaps = 64/533 (12%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLS------KCRQQKQKEPSKISFE--LPPELCRII 931
RYG+ L + ++PL+ GR + + +N LS + + + +E ++ LPPELC +
Sbjct: 1292 RYGVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTYYVFLPPELC--L 1349
Query: 932 MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQ 991
+ P+ S +PSIM R++S+LLAV LKNM+ + +K+LEA+T CQ
Sbjct: 1350 VHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMINYPVQASKVSSQLKILEALTAASCQ 1409
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E F E E LGD++LK+ S+ LF + HEG L+ +++++SN L + + L
Sbjct: 1410 ETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSKGLQS 1469
Query: 1052 FIRTESFDPKMWIIPG----------DNSGSYELNDDSLFNGRKIYVTGR---------- 1091
+I + F P W PG D S + S+F ++ T
Sbjct: 1470 YILADRFAPSRWAAPGVLPVFDEDTKDEESSLFDQERSIFKAERMDNTDEFEDEMEDGEL 1529
Query: 1092 -------KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----------V 1133
+ + SKT+ADVVEALIG + GG+N + IGI ++
Sbjct: 1530 ESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEMECITKPS 1589
Query: 1134 NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1193
NVP R V+ LE LN F+D LL+E++TH S + CYQRLEF+G
Sbjct: 1590 NVPDS------ILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGV-SCYQRLEFVG 1642
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
DAVLD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+
Sbjct: 1643 DAVLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQ 1702
Query: 1254 INITV----DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
I V D K S FG + PK LGDI+ES+AGAIF+DSG N VV++ +
Sbjct: 1703 IKDFVKEVQDELSKPGFNS-FGLGDCKA-PKVLGDILESIAGAIFLDSGRNTAVVWKVFQ 1760
Query: 1310 PLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
PLL PM+TPET+ HPVREL E CQ+ ++ ASR A TVEV +G
Sbjct: 1761 PLLHPMVTPETLPMHPVRELQERCQQQAEGLEY-RASRAGNLA--TVEVFIDG 1810
>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1965
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 274/753 (36%), Positives = 393/753 (52%), Gaps = 108/753 (14%)
Query: 4 VSMESDTTEEVSADTLPF----ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS- 58
+ +++ +E +T+P AR YQL+ LE A +NTI FLETG+GKTLIA++L++S
Sbjct: 198 MDIDNPIKQEKPKETVPVPEEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSI 257
Query: 59 YAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS 118
+ L + +AVFLVPKV LV QQAE I+ T +VG Y G+MG DFWD W+ E
Sbjct: 258 HETLHLQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFD 317
Query: 119 KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS 178
VLVMT QILL+ LR S K+ I +LILDECHHA KH Y+ +M+EFYH T
Sbjct: 318 TKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKE 374
Query: 179 NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK 238
P +FGMTASP+ K SS+ D KI +LE+ ++S V T L +P +
Sbjct: 375 KRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIV- 433
Query: 239 FYKYDEIPHALYTH---------------------------LADELAMIELKHTRSLENL 271
KYD+ Y H D A EL+ +
Sbjct: 434 -VKYDKAASLCYLHEQIKQMETEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSER 492
Query: 272 DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGE 329
++ A LI +K+ +N Y L ELG W A K A++ ++ ++D A QLD F E
Sbjct: 493 TESDGAANLI-QKLRAVN----YALGELGQWCAYKVAQSFLAALQNDERANYQLDVKFQE 547
Query: 330 TIIKKF------------------GSDASQALV------------------TYVPSGAEW 353
+ + K G D SQ ++V SG E
Sbjct: 548 SYLSKVVSLLKCQLSEGAISDKNDGVDDSQNGAAHSGSDEHEEIEEGELPDSHVVSGGEH 607
Query: 354 S---IGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL 410
IG + G +T K+ LI+ LL+Y+ +D R IIFVERV++A+VL + +E
Sbjct: 608 VDVIIG----AAVADGKVTPKVQALIKILLKYQNTDDFRAIIFVERVVSALVLPKVFAE- 662
Query: 411 LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
LP K + G+N+ + ++ + + I +FR G V ++VATS+ EEGLD++ CN+V
Sbjct: 663 LPSLSFVKCASLIGHNNSQEMRTHQMHDTIA-KFRDGRVTLLVATSVAEEGLDIRQCNVV 721
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV----- 525
I FD ++TV ++IQSRGRAR SDY+LMV+ G+ + ++ L+N S +R+E
Sbjct: 722 IRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLKNARNSEETLRREAIERTD 781
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
LSH ++ + E Y V+STG + +L+S+V L++FYCS+LPSD Y P+F +
Sbjct: 782 LSHLKDSSRLISVDTHPETMYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIM 841
Query: 586 NKEMG-------ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNL 636
K C L LP N P + + +I+ +QA CL AC+KLH++GA TD L
Sbjct: 842 EKHENSGGPTEYSCRLQLPCNAPFENLEGPICSSIRLAQQAVCLAACRKLHEMGAFTDML 901
Query: 637 LPDIVV----EKHDAQKRGNE-PYNAEHPIYFP 664
LPD EK + G+ P A H ++P
Sbjct: 902 LPDKGSGEEKEKAEQNDEGDALPGTARHREFYP 934
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 284/533 (53%), Gaps = 70/533 (13%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLS------KCRQQKQKEPSKISFE--LPPELCRII 931
RYG+ L + ++PL+ GR + + +N LS + + + +E ++ LPPELC +
Sbjct: 1324 RYGVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTYYVFLPPELC--L 1381
Query: 932 MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQ 991
+ P+ S +PSIM R++S+LLAV LKNM+ N + K+LEA+T CQ
Sbjct: 1382 VHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMI------NYPVQASKILEALTAASCQ 1435
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E F E E LGD++LK+ S+ LF + HEG L+ +++++SN L + + L
Sbjct: 1436 ETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSKGLQS 1495
Query: 1052 FIRTESFDPKMWIIPG----------DNSGSYELNDDSLFNGRKIYVTGR---------- 1091
+I + F P W PG D S + S+F ++ T
Sbjct: 1496 YILADRFAPSRWAAPGVLPVFDEDTKDEESSLFDQERSIFKAERMDNTDEFEDEMEDGEL 1555
Query: 1092 -------KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----------V 1133
+ + SKT+ADVVEALIG + GG+N + IGI ++
Sbjct: 1556 ESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEMECITKPS 1615
Query: 1134 NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1193
NVP R V+ LE LN F+D LL+E++TH S + CYQRLEF+G
Sbjct: 1616 NVPDS------ILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGV-SCYQRLEFVG 1668
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
DAVLD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+
Sbjct: 1669 DAVLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQ 1728
Query: 1254 INITV----DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
I V D K S FG + PK LGDI+ES+AGAIF+DSG N VV++ +
Sbjct: 1729 IKDFVKEVQDELSKPGFNS-FGLGDCKA-PKVLGDILESIAGAIFLDSGRNTAVVWKVFQ 1786
Query: 1310 PLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
PLL PM+TPET+ HPVREL E CQ+ ++ ASR A TVEV +G
Sbjct: 1787 PLLHPMVTPETLPMHPVRELQERCQQQAEGLEY-RASRAGNLA--TVEVFIDG 1836
>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1910
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 289/840 (34%), Positives = 427/840 (50%), Gaps = 113/840 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ + ++VFLVPKV L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S +
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIR 368
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P IFGMTASP+ K SS+
Sbjct: 369 METIDLLILDECHHAVKKHPYSLVMSEFYHT---TPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPF------------------STAKFKFYKY 242
D KI +LET ++S V T L +P T K
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 243 DEIPHA-------LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+E A + D A EL+ + ++ A LI K + IN Y
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK-LRAIN----YT 540
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS-------DASQALVTY 346
L+ELG W A K ++ +S +SD Q+D F E+ + + S + + A
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 347 VPSGA-----------EWSIGDDSKFN------------LDSGLLTEKIVCLIESLLEYR 383
G E + DD + + G +T K+ LI+ LL+Y+
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
D R I+FVERV+ A+VL + +EL P + + G+N+ + +S + Q+ I +
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAEL-PSLSFIRCASMIGHNNSQEMKSSQMQDTI-SK 718
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LMV+ G
Sbjct: 719 FRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERG 778
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLS 558
+ + + L N S +RKE + L + + D Y VE+TG + +L+
Sbjct: 779 NVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLN 838
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQG-- 609
S+V L++FYCS+LP D Y P+F + K C L LP N P + I +G
Sbjct: 839 SAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGPV 896
Query: 610 --NIKTLKQAACLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPIY 662
+++ +QA CL ACKKLH++GA TD LLPD EK D G P A H +
Sbjct: 897 CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREF 956
Query: 663 FPP--------ELVNQSPQ--DTKITYHCYLIEL--------KQHFNYDISARNIVLAMR 704
+P E V+ + ++ +H Y+ + K F ++S I+
Sbjct: 957 YPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFG-- 1014
Query: 705 TELESEIK-KVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
EL++E+ ++ DL V R +T +L G + + NQ+ ++F + L +++D +++
Sbjct: 1015 NELDAEVVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVE 1074
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 312/573 (54%), Gaps = 67/573 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++A + F R G + TY +Y+++YG+ L ++PL
Sbjct: 1216 IVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPL 1275
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPS 948
+ GR + + +N LS +Q + + + LPPELC ++ P+S S +PS
Sbjct: 1276 IKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELC--VVHPLSGSLIRGAQRLPS 1333
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
IM R++S+LLAV LKN++ + IPT K+LEA+T CQE F E E LGD++LK
Sbjct: 1334 IMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYERAELLGDAYLK 1387
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG- 1067
+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1388 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 1447
Query: 1068 ---------DNSGSY---------ELNDDSLFNGR------KIYVTGRKKVKSKTVADVV 1103
D S+ E N D +G + ++ + + SKT+ADVV
Sbjct: 1448 PPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVV 1507
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPYQRQFQVHAERLVNVR 1152
EALIG + GG+ + IGI V+ VNVP + ++
Sbjct: 1508 EALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES------VLKSIDFV 1561
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y L
Sbjct: 1562 GLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTSL 1620
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG---ST 1269
PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K+I V + S ++
Sbjct: 1621 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1680
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
FG + PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+TPET+ HPVREL
Sbjct: 1681 FGLGDCKA-PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVREL 1739
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
E CQ+ ++ ASR SG A TVEV +G
Sbjct: 1740 QERCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 1769
>gi|413933740|gb|AFW68291.1| hypothetical protein ZEAMMB73_565304 [Zea mays]
Length = 462
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/471 (44%), Positives = 300/471 (63%), Gaps = 16/471 (3%)
Query: 932 MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQ 991
MAP+S +T +SF+FVPSIM+R+Q LLL+ LK + L MQ I +K+LEA+TTK+CQ
Sbjct: 1 MAPVSANTLFSFSFVPSIMYRIQCLLLSAKLK-IQLGPRMQQFNITAMKILEALTTKECQ 59
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E F +ESLETLGDSF+KY Q LF Y++ + L S+++E++ SN ALC+L C+ ++ G
Sbjct: 60 EKFSMESLETLGDSFIKYVTGQNLFNKYKHREDMLTSMREEKV-SNPALCQLACKSEIVG 118
Query: 1052 FIRTESFDPKMWIIPG---DNSGSYELNDDSLFNG-RKIYVTGRKKVKSKTVADVVEALI 1107
+IR E F+P+ W IPG D+ G N+ F +Y + +KSK +AD VEAL
Sbjct: 119 YIRGELFNPQKWTIPGFGYDSRG----NNKVFFRATNNMYSLKKISIKSKRIADTVEALT 174
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPS 1166
GA+LST GE + F+ +G+ V+ + +R +E L++ L+++L Y F D S
Sbjct: 175 GAYLSTCGELAAVHFIKALGMDVELHSKMQVERTITTKSEELIDAESLQTMLKYVFYDTS 234
Query: 1167 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN 1226
LLVEALTH SY + I C +RLEFLGDAVLDY++T Y Y KYP +P LT++R ASVN
Sbjct: 235 LLVEALTHSSYNITGITACNERLEFLGDAVLDYILTYYFYRKYPNCTPALLTNLRKASVN 294
Query: 1227 NDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDII 1286
N CYA ++VK GLHKHILH+S + + +N +S S G + GWE+ S P+ L D+
Sbjct: 295 NCCYAHAAVKAGLHKHILHSSSK--QMVNDLENSGRSFS-GPSHGWEAGISLPEDLADLF 351
Query: 1287 ESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK--KPV 1344
E++AGAI+VDSG ++EVV+ +IR LLEP+ TP TM PV EL E C+ H+ P
Sbjct: 352 EAIAGAIYVDSGNDKEVVWSAIRRLLEPLATPGTMEPDPVSELKELCEHKHYPKPSYSPT 411
Query: 1345 ASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFPG 1395
++G V +V A ++ T ++ A+ +A K +LK ++A+ G
Sbjct: 412 RDSVAGVTRVVAQVTAARTVYSGTGTGRNQDVAEVLAAKALLKKIKAAARG 462
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 290/861 (33%), Positives = 421/861 (48%), Gaps = 103/861 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQLE L A + NTI FLETG+GKTLIA++L++ A LL++ + VFLVPKV LV
Sbjct: 96 ARAYQLEVLSQAEEGNTIAFLETGAGKTLIAVLLMKRKAELLQRK--ILTVFLVPKVPLV 153
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQAE I+ T+ VG Y G+M DFWD W+ E EVLVMT QILL+ LR S ++
Sbjct: 154 YQQAEVIRERTNFNVGHYCGEMVQDFWDSKRWQREFQSKEVLVMTAQILLNILRHSIVRM 213
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
I +LILDECHHA KH Y+ +M+EFYH P+IFGMTASP+ K S+++D
Sbjct: 214 EDIDLLILDECHHAVKKHPYSLVMSEFYHL---APKEKRPKIFGMTASPVNLKGVSNQED 270
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL------------ 249
KI +LET ++S V T L +P + Y + +L
Sbjct: 271 CAVKIRNLETKLDSVVCTIRDRKELEKHVPMPSETVVEYDKAAVLWSLREKIKQMKEQVE 330
Query: 250 -------------YTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL 296
+ D A EL + ++ A L++K S +++CL
Sbjct: 331 EACSASSKRTKWQFMGARDAGASDELHFVYGVAERKESDGAANLLQKLRS-----IIFCL 385
Query: 297 SELGVWLALKAA-----------ETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT 345
ELG W A K A T + + + +D + + G+ +S L
Sbjct: 386 DELGQWCAYKVASSSLGNLRHDERTADVKYQELYLTKIVDMLKCDLQQ--GAASSSKLEA 443
Query: 346 YVPSGAEWSIGDDSKFN----LDSGL--------LTEKIVCLIESLLEYRGVEDIRCIIF 393
E + D + + D L +T K+ LI+ L +Y VED R IIF
Sbjct: 444 VHGDVEEGEVIDTNSLSGGEHFDEVLGAAVADKKVTPKVQSLIQILRKYEHVEDFRAIIF 503
Query: 394 VERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIV 453
V+RV+ A+ L +LSEL + NNS Q S + ++ + +FR G +NV+V
Sbjct: 504 VDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNS--QDVSTRHMHDSLSKFRDGSLNVLV 561
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LM++ G+ QS L N
Sbjct: 562 ATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGRARKPGSDYILMLEKGNKVHQSFLRN 621
Query: 514 YLASGNKMRKEVLSHASL-PCSPLNNHMYGED----FYHVESTGTIATLSSSVSLIYFYC 568
S +RKE L P + ED Y V STG + TL+S+V LI+FYC
Sbjct: 622 ARNSEETLRKEATERTKLDPWTEAAIVASLEDGKGETYQVPSTGAMVTLNSAVGLIHFYC 681
Query: 569 SRLPSDGYFKPTPKFHINKEMG------ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACL 620
S+LPSD Y P+F + K C L LP+N P+++ +K +QA CL
Sbjct: 682 SQLPSDRYSILKPEFVLTKHSTGDVVYFSCKLRLPSNAPVESFDGPVCSTMKGAQQAVCL 741
Query: 621 EACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHPIYFPPELVNQSPQD- 674
EACKKLH++ A TD LLPD + NE P A + YFP + + D
Sbjct: 742 EACKKLHEMAAFTDMLLPDTGTPDKSDKGEDNETTDPIPGTARYREYFPEGIADFLKGDW 801
Query: 675 -------TKITYHCYLIELKQ-HFNYD---ISARNIVLAMRTELESEIKKVNFDLEVERG 723
+ + Y+I+ F+ D + + E++ E+ + DL V R
Sbjct: 802 ILNTNYLLSTSLYMYIIQYSNVGFSTDPLVTQTSDFAVLFGREMDPEVLTASVDLFVART 861
Query: 724 RLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYL 782
T +L G + +++ L + F + L +++D +++ + D + YL
Sbjct: 862 LTTQASLVFSGVHHITSSELTLLKAFHVRLMSIVLDVDVEPASTPWDSNKA-------YL 914
Query: 783 LLPSTG---QLIDWKTVATVL 800
+P T + IDW + VL
Sbjct: 915 FVPLTSSCTKQIDWALMNKVL 935
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 311/593 (52%), Gaps = 87/593 (14%)
Query: 833 KIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCF 887
++ LV H+G+ + + V+ + A S F R G + ++Y +YE++YG++L
Sbjct: 1025 EMDGKLVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQKYGVRLHC 1084
Query: 888 DREPLLNGRRIFHVQNYLS---KCRQQKQKEPSKISF-ELPPELCRIIMAPISLSTFYSF 943
+P+L R + H +N LS K + ++ K + LPPE+C ++ P+
Sbjct: 1085 RHQPMLRCRGVSHCKNLLSPRFKLLESSEELSDKTYYVMLPPEIC--LVHPLPGCLVRGA 1142
Query: 944 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLG 1003
+PS+M R++S+LLAV LK+ + IP KVLEA+T CQE F E E LG
Sbjct: 1143 QRLPSVMKRVESILLAVQLKHEI------GFPIPAAKVLEALTAASCQETFSYERAELLG 1196
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D++LK+ S++LF + HEG L+ +++ +SN L + + L +I+++ F P W
Sbjct: 1197 DAYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQSDRFAPSRW 1256
Query: 1064 IIPG--------------DN------------------SGSYELNDDS--LFNGRKIYVT 1089
PG DN SG E+ DDS L +G + +
Sbjct: 1257 AAPGVPPVFDEDLKDANLDNEAAEVPKANEHEERSTKSSGEEEVLDDSTSLEDGEAEWDS 1316
Query: 1090 GRKKV-KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL 1148
+V SKT+ADVVEALIG + GG F++ I I +D+ + + +A R
Sbjct: 1317 SSYRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWINIPIDY------DEAEANAARA 1370
Query: 1149 -----------VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
++ LE + Y F+ S+LVEA++H S +P CYQRLEF+GDAVL
Sbjct: 1371 GCSVPDSVMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVP-CYQRLEFVGDAVL 1429
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
D+LIT YL+ +Y L PG LTD+R+A+VNN+ +A SVKH H H+ H S L +I
Sbjct: 1430 DHLITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEAQIKDF 1489
Query: 1258 VDSFEKLSLGSTFGWESVTSF-------PKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
V + S + SF PK LGDI+ES+AGAIF+D+G + V++
Sbjct: 1490 VKDIQ-----SELDKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFER 1544
Query: 1311 LLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAV-TVEVQANG 1362
LLEPM+TP+T+ HPVREL E CQ+ ++ R S + ++ TVEV +G
Sbjct: 1545 LLEPMVTPDTLPVHPVRELQERCQQQAEGLE----YRASREGSIATVEVFVDG 1593
>gi|449485333|ref|XP_004157136.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 276
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/259 (72%), Positives = 221/259 (85%), Gaps = 1/259 (0%)
Query: 5 SMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR 64
+ME++ E++ AD L FAR+YQLE LE ALKQNT+VFLETGSGKTLIAIMLLRS+A+ LR
Sbjct: 4 NMETEN-EQLVADPLSFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLR 62
Query: 65 KPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLV 124
KPSPFVAVFLVP+VVLV QQAEA+KMH+DL VG Y+GDMGVDFWDGA WK E+ KHEVLV
Sbjct: 63 KPSPFVAVFLVPQVVLVTQQAEALKMHSDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLV 122
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIF 184
MTP ILL+GLR S+F+L+MIKVLILDECHHARGKH YACIMTEFYH+ L G S+LPRIF
Sbjct: 123 MTPAILLNGLRHSFFRLSMIKVLILDECHHARGKHPYACIMTEFYHQQLSLGKSDLPRIF 182
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE 244
GMTASPIKSK +SE +YWQ I +LE+L+NSKVYT +SES L+NF+P ST KFKFY +
Sbjct: 183 GMTASPIKSKGGNSELNYWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFYIRKD 242
Query: 245 IPHALYTHLADELAMIELK 263
IP+ALY LA+ L +++ K
Sbjct: 243 IPYALYEQLANALKVLKSK 261
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 289/861 (33%), Positives = 420/861 (48%), Gaps = 103/861 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQLE L A + NTI FLETG+GKTLIA++L++ A LL++ + VFLVPKV LV
Sbjct: 96 ARAYQLEVLSQAEEGNTIAFLETGAGKTLIAVLLMKRKAELLQRK--ILTVFLVPKVPLV 153
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQAE I+ T+ VG Y G+M DFWD W+ E EVLVMT QILL+ LR S ++
Sbjct: 154 YQQAEVIRERTNFNVGHYCGEMVQDFWDSKRWQREFQSKEVLVMTAQILLNILRHSIVRM 213
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
I +LILDECHHA KH Y+ +M+EFYH P+IFGMTASP+ K S+++D
Sbjct: 214 EDIDLLILDECHHAVKKHPYSLVMSEFYHL---APKEKRPKIFGMTASPVNLKGVSNQED 270
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL------------ 249
KI +LET ++S V T L +P + Y + +L
Sbjct: 271 CAVKIRNLETKLDSVVCTIRDRKELEKHVPMPSETVVEYDKAAVLWSLREKIKQMKEQVE 330
Query: 250 -------------YTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL 296
+ D A EL + ++ A L++K S +++CL
Sbjct: 331 EACSASSKRTKWQFMGARDAGASDELHFVYGVAERKESDGAANLLQKLRS-----IIFCL 385
Query: 297 SELGVWLALKAA-----------ETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT 345
ELG W A K A T + + + +D + + G+ +S L
Sbjct: 386 DELGQWCAYKVASSSLGNLRHDERTADVKYQELYLTKIVDMLKCDLQQ--GAASSSKLEA 443
Query: 346 YVPSGAEWSIGDDSKFN----LDSGL--------LTEKIVCLIESLLEYRGVEDIRCIIF 393
E + D + + D L +T K+ LI+ L +Y V+D R IIF
Sbjct: 444 VHGDVEEGEVIDTNSLSGGEHFDEVLGAAVADKKVTPKVQSLIQILRKYEHVDDFRAIIF 503
Query: 394 VERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIV 453
V+RV+ A+ L +LSEL + NNS Q S + ++ + +FR G +NV+V
Sbjct: 504 VDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNS--QDVSTRHMHDSLSKFRDGSLNVLV 561
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LM++ G+ QS L N
Sbjct: 562 ATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGRARKPGSDYILMLEKGNKVHQSFLRN 621
Query: 514 YLASGNKMRKEVLSHASL-PCSPLNNHMYGED----FYHVESTGTIATLSSSVSLIYFYC 568
S +RKE L P + ED Y V STG + TL+S+V LI+FYC
Sbjct: 622 ARNSEETLRKEATERTKLDPWTEAAIVASLEDGKGETYQVPSTGAMVTLNSAVGLIHFYC 681
Query: 569 SRLPSDGYFKPTPKFHINKEMG------ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACL 620
S+LPSD Y P+F + K C L LP+N P+++ +K +QA CL
Sbjct: 682 SQLPSDRYSILKPEFVLTKHSTGDVVYFSCKLRLPSNAPVESFDGPVCSTMKGAQQAVCL 741
Query: 621 EACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHPIYFPPELVNQSPQD- 674
EACKKLH++ A TD LLPD + NE P A + YFP + + D
Sbjct: 742 EACKKLHEMAAFTDMLLPDTGTSDKSDKGEDNETTDPIPGTARYREYFPEGIADFLKGDW 801
Query: 675 -------TKITYHCYLIELKQ-HFNYD---ISARNIVLAMRTELESEIKKVNFDLEVERG 723
+ + Y+I F+ D + + E++ E+ + DL V R
Sbjct: 802 ILNTNYLLSTSLYMYIIHYSNIGFSTDPLVTQTSDFAVLFGREMDPEVLTASVDLFVART 861
Query: 724 RLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYL 782
T +L G + +++ L + F + L +++D +++ + D + YL
Sbjct: 862 LTTQASLVFSGVHHITSSELTLLKAFHVRLMSIVLDVDVEPASTPWDSNKA-------YL 914
Query: 783 LLPSTG---QLIDWKTVATVL 800
+P T + IDW + VL
Sbjct: 915 FVPLTSSCTKQIDWALMNEVL 935
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 311/593 (52%), Gaps = 87/593 (14%)
Query: 833 KIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCF 887
++ LV H+G+ + + V+ + A S F R G + ++Y +YE++YG++L
Sbjct: 1025 EMDGKLVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQKYGVRLHC 1084
Query: 888 DREPLLNGRRIFHVQNYLS---KCRQQKQKEPSKISF-ELPPELCRIIMAPISLSTFYSF 943
+P+L R + H +N LS K + ++ K + LPPE+C ++ P+
Sbjct: 1085 RHQPMLRCRGVSHCKNLLSPRFKLLESSEELSDKTYYVMLPPEIC--LVHPLPGCLVRGA 1142
Query: 944 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLG 1003
+PS+M R++S+LLAV LK+ + IP KVLEA+T CQE F E E LG
Sbjct: 1143 QRLPSVMKRVESILLAVQLKHEI------GFPIPAAKVLEALTAASCQETFSYERAELLG 1196
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D++LK+ S++LF + HEG L+ +++ +SN L + + L +I+++ F P W
Sbjct: 1197 DAYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQSDRFAPSRW 1256
Query: 1064 IIPG--------------DN------------------SGSYELNDDS--LFNGRKIYVT 1089
PG DN SG E+ DDS L +G + +
Sbjct: 1257 AAPGVPPVFDEDLKDSNLDNEAAEVPKASEHEERSTKSSGEEEVLDDSTSLEDGEAEWDS 1316
Query: 1090 GRKKV-KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL 1148
+V SKT+ADVVEALIG + GG F++ I I +D+ + + +A R
Sbjct: 1317 SSYRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWISIPIDY------DEAEANAARA 1370
Query: 1149 -----------VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
++ LE + Y F+ S+LVEA++H S +P CYQRLEF+GDAVL
Sbjct: 1371 GCSVPDSVMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVP-CYQRLEFVGDAVL 1429
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
D+LIT YL+ +Y L PG LTD+R+A+VNN+ +A SVKH H H+ H S L +I
Sbjct: 1430 DHLITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEAQIKDF 1489
Query: 1258 VDSFEKLSLGSTFGWESVTSF-------PKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
V + S + SF PK LGDI+ES+AGAIF+D+G + V++
Sbjct: 1490 VKDIQ-----SELDKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFER 1544
Query: 1311 LLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAV-TVEVQANG 1362
LLEPM+TP+T+ HPVREL E CQ+ ++ R S + ++ TVEV +G
Sbjct: 1545 LLEPMVTPDTLPVHPVRELQERCQQQAEGLE----YRASREGSIATVEVFVDG 1593
>gi|168039663|ref|XP_001772316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676303|gb|EDQ62787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1275
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 300/963 (31%), Positives = 462/963 (47%), Gaps = 102/963 (10%)
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLS---HASLPCSPLNNHMYGEDFYHVESTG 552
Y+ + G++ RLE +L + M++EVLS +A +P + + + + VESTG
Sbjct: 9 YMSLFSRGNNEQSQRLEQFLLTEESMKEEVLSRIKNAEDVGAPETSTI---ETFRVESTG 65
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE-MGI-CTLYLPNNCPIQTVIAQ-- 608
+ SVSL++ YC+RL D ++ PTP+F +++ G+ CT+ LP + +Q+V +
Sbjct: 66 ATMSTLCSVSLLHQYCARLAHDSFYTPTPQFSYSEDGSGVKCTIKLPTDALVQSVEGRPV 125
Query: 609 GNIKTLKQAACLEACKKLHQIGALTDNLL----------PDIVVEKHDAQKRGNEPYNAE 658
+ K+ ACL AC++L+ GALT+ LL I E + R P +
Sbjct: 126 SSQADAKRVACLIACERLYDAGALTELLLLKSKENAYSLDAIAPESNSTTGRDPLPSRS- 184
Query: 659 HPIYFPPELVNQSPQD-TKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFD 717
I P + H Y I N D + N L + ++ E + +
Sbjct: 185 --IIVPDAFSGTWGSGLNSVELHAYAISFVATPN-DRAYVNFGLFLEADMGPEAGSIEVE 241
Query: 718 LEVERGRLTVNLK--HLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRD 775
L++ RL VN K G I P+Q+ + FQ +F ++D N L G +
Sbjct: 242 LQLSNRRL-VNAKCSPCGTILFEPDQLRNAKSFQERIFSSVLDQKPPVPNIELSGEWNSN 300
Query: 776 NLEIDYLLLPSTGQL------IDWKTVATVLFPRDNGSKHNMNC-STMFNARIVHTKSGP 828
L YLLLP + IDW + ++ G S + + ++ G
Sbjct: 301 RL---YLLLPLKEKQDALPLSIDWDCIEDLISDVMKGYNTLEEVPSEIPRSSLLRLIDGY 357
Query: 829 LCTCKIHNSLVCTPHNGQ--IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLC 886
+ NSL+ T H G+ +YC ++ +N S +Y +Y +++ L
Sbjct: 358 FPVEHVTNSLIQTEHTGKRCLYCARELIPDMNGQSPMIMKVSKYNSYSDYYLKKHNRTLN 417
Query: 887 FDREPLLNGRRIFHVQNYLSKC----RQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
F +P+L + + V N L++ R +++ ++ ELP ELC+I++ +S +
Sbjct: 418 FVEQPMLKAKPLIQVNNLLTQRTTSERPAAEEQKTESLVELPLELCKIMVKGLSCALTNG 477
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETL 1002
+ +PS MHRL+ LLLAV + L + +P +LEAITT KCQE F LE LE L
Sbjct: 478 ISLLPSFMHRLEGLLLAVQFRKSL--PSPHSSPVPANLMLEAITTSKCQESFSLEGLELL 535
Query: 1003 GDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKL------------- 1049
GD+FL+ + S++LF + EG LS ++ +I N L +LG E+ +
Sbjct: 536 GDAFLEVSVSERLFLLHNRLDEGELSKRRTNLICNKMLERLGRERGIMVSKSCRDTTRST 595
Query: 1050 ------------PGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK--KVK 1095
+IR F PK W PG ++ T K ++
Sbjct: 596 YKQFEIMINLVSENYIRDTQFSPKEWATPG-----------------RVRETQCKLPPLQ 638
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN-VPYQRQFQVHAE----RLVN 1150
KT+ADV EALIGA GG + +G +V + + + + +VH +
Sbjct: 639 GKTIADVFEALIGAHYIHGGVEAAQAMMGWLGCEVGVSSSIREEARTRVHGQLELLSEAK 698
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
V LE LLNY F++ LLVEALTH S CYQRLEFLGDAVLD+LIT + Y
Sbjct: 699 VSELEILLNYKFQNKGLLVEALTHASCRR-HSGDCYQRLEFLGDAVLDFLITKHFYANSA 757
Query: 1211 GL--SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
L PG LTD+RSA+VNN+C+A +V+H LH ++LH S +L R++ V +
Sbjct: 758 NLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDKYVHG--STTDAQ 815
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
GW S PK L D++ESLAGA+F+DSG + V+ + LL+P++TP T+R P+RE
Sbjct: 816 CHGWNG-DSGPKVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPLVTPATLRLEPIRE 874
Query: 1329 LTEYCQKNHFSMKKPVASRIS-GKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
L E CQ F R + G +TV V+ D+K+A+KVA + L+
Sbjct: 875 LWELCQTEKFGEPNYKKKREAMGDFDMTVTVELKDETITGVGRKPDEKSARKVAAIQALE 934
Query: 1388 SLR 1390
+L+
Sbjct: 935 TLK 937
>gi|374259480|gb|AEZ02176.1| Dicer [Arabidopsis thaliana]
Length = 1033
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 266/722 (36%), Positives = 375/722 (51%), Gaps = 91/722 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ + ++VFLVPKV L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S +
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIR 368
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P IFGMTASP+ K SS+
Sbjct: 369 METIDLLILDECHHAVKKHPYSLVMSEFYH---TTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPF------------------STAKFKFYKY 242
D KI +LET ++S V T L +P T K
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 243 DEIPHA-------LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+E A + D A EL+ + ++ A LI K+ IN Y
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIH-KLRAIN----YT 540
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS-------DASQALVTY 346
L+ELG W A K ++ +S +SD Q+D F E+ + + S + + A
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 347 VPSGA-----------EWSIGDDSKFN------------LDSGLLTEKIVCLIESLLEYR 383
G E + DD + + G +T K+ LI+ LL+Y+
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
D R I+FVERV+ A+VL + +E LP + + G+N+ + +S + Q+ I +
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAE-LPSLSFIRCASMIGHNNSQEMKSSQMQDTI-SK 718
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LMV+ G
Sbjct: 719 FRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERG 778
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLS 558
+ + + L N S +RKE + L + + D Y VE+TG + +L+
Sbjct: 779 NVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLN 838
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQG-- 609
S+V L++FYCS+LP D Y P+F + K C L LP N P + I +G
Sbjct: 839 SAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGPV 896
Query: 610 --NIKTLKQAACLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPIY 662
+++ +QA CL ACKKLH++GA TD LLPD EK D G P A H +
Sbjct: 897 CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREF 956
Query: 663 FP 664
+P
Sbjct: 957 YP 958
>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
Length = 1886
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 266/722 (36%), Positives = 375/722 (51%), Gaps = 91/722 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ + ++VFLVPKV L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ T +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S +
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIR 368
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P IFGMTASP+ K SS+
Sbjct: 369 METIDLLILDECHHAVKKHPYSLVMSEFYHT---TPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPF------------------STAKFKFYKY 242
D KI +LET ++S V T L +P T K
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 243 DEIPHA-------LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+E A + D A EL+ + ++ A LI K+ IN Y
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIH-KLRAIN----YT 540
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS-------DASQALVTY 346
L+ELG W A K ++ +S +SD Q+D F E+ + + S + + A
Sbjct: 541 LAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVA 600
Query: 347 VPSGA-----------EWSIGDDSKFN------------LDSGLLTEKIVCLIESLLEYR 383
G E + DD + + G +T K+ LI+ LL+Y+
Sbjct: 601 AEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQ 660
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
D R I+FVERV+ A+VL + +E LP + + G+N+ + +S + Q+ I +
Sbjct: 661 HTADFRAIVFVERVVAALVLPKVFAE-LPSLSFIRCASMIGHNNSQEMKSSQMQDTI-SK 718
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV ++IQSRGRAR SDY+LMV+ G
Sbjct: 719 FRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERG 778
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLS 558
+ + + L N S +RKE + L + + D Y VE+TG + +L+
Sbjct: 779 NVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLN 838
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQG-- 609
S+V L++FYCS+LP D Y P+F + K C L LP N P + I +G
Sbjct: 839 SAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGPV 896
Query: 610 --NIKTLKQAACLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPIY 662
+++ +QA CL ACKKLH++GA TD LLPD EK D G P A H +
Sbjct: 897 CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREF 956
Query: 663 FP 664
+P
Sbjct: 957 YP 958
Score = 321 bits (823), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 312/573 (54%), Gaps = 67/573 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++A + F R G + TY +Y+++YG+ L ++PL
Sbjct: 1192 IVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPL 1251
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPS 948
+ GR + + +N LS +Q + + + LPPELC ++ P+S S +PS
Sbjct: 1252 IKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELC--VVHPLSGSLIRGAQRLPS 1309
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
IM R++S+LLAV LKN++ + IPT K+LEA+T CQE F E E LGD++LK
Sbjct: 1310 IMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFCYERAELLGDAYLK 1363
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG- 1067
+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W PG
Sbjct: 1364 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 1423
Query: 1068 ---------DNSGSY---------ELNDDSLFNGR------KIYVTGRKKVKSKTVADVV 1103
D S+ E N D +G + ++ + + SKT+ADVV
Sbjct: 1424 PPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVV 1483
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPYQRQFQVHAERLVNVR 1152
EALIG + GG+ + IGI V+ VNVP + ++
Sbjct: 1484 EALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES------VLKSIDFV 1537
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y L
Sbjct: 1538 GLERALKYEFKEKGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTSL 1596
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG---ST 1269
PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K+I V + S ++
Sbjct: 1597 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1656
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
FG + PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+TPET+ HPVREL
Sbjct: 1657 FGLGDCKA-PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVREL 1715
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
E CQ+ ++ ASR SG A TVEV +G
Sbjct: 1716 QERCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 1745
>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
Length = 1690
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 286/867 (32%), Positives = 432/867 (49%), Gaps = 120/867 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP-FVAVFLVPKVVL 80
AR YQL+ LE+A K+ TI FLETG+GKTLIAI+L++S L K + +AVFLVPKV L
Sbjct: 30 ARKYQLDVLEHARKKXTIAFLETGAGKTLIAILLMKSLCNDLHKQNKKMLAVFLVPKVPL 89
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYF 139
V QQAE I+ T +VG Y G+MG + A W+ E +VLVMT QILL+ LR S
Sbjct: 90 VYQQAEVIREQTGYQVGHYCGEMGPRIFGIARRWQREFETKQVLVMTAQILLNILRHSII 149
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
K+ I +LI+DECHHA KH Y+ +M+EFYH T + MTASP+ K SS+
Sbjct: 150 KMEAINLLIMDECHHAVKKHPYSLVMSEFYH---TTQKAKGHLFLAMTASPVNLKGVSSQ 206
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA----- 254
D KI +LET ++S V+T L +P + Y +L+ +
Sbjct: 207 VDCAIKIRNLETKLDSVVFTIKDRKDLEKHVPMPSEVVVEYDKAASLWSLHEQIKQMESA 266
Query: 255 --------------------DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY 294
D A EL+ + ++ A LI +K+ IN Y
Sbjct: 267 VEEAAQSSSRRSKWQFMGARDAGAREELRQVYGVSERTESDGAANLI-QKLRAIN----Y 321
Query: 295 CLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKFGS--------------- 337
L ELG W A K A + ++ ++D A QLD F E+ + K S
Sbjct: 322 ALGELGQWCAYKVARSFLTALQNDERASYQLDVKFQESYLDKVVSLLQCQLSEGAVAENG 381
Query: 338 ------------------DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESL 379
+ + L ++V S E + + G +T K+ LI+ L
Sbjct: 382 KMDEGNNPNNDCDRPDEMEEGELLESHVVSSGE-HVDATLGAAVADGKVTPKVQSLIKIL 440
Query: 380 LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNE 439
L+Y+ ED R IIFVERV+TA+VL + EL P + + G+N+ + ++ + Q+
Sbjct: 441 LKYQHTEDFRAIIFVERVVTALVLPKVFEEL-PSLSFITSSSLIGHNNSQEMRTGQMQDT 499
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
I + FR G +N++VATS+ EEGLD++ CN+VI FD ++T+ ++IQSRGRAR SDY+LM
Sbjct: 500 IAK-FRDGRMNLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYILM 558
Query: 500 VKSGDSTTQSRLENYLASGNKMRKEV-----LSHASLPCSPLNNHMYGEDFYHVESTGTI 554
V+ + + ++ L N S +RKE +SH ++ + Y VESTG +
Sbjct: 559 VERDNLSHEAFLRNARNSEETLRKEAIERTDISHLKGASKLISGEAPTDSVYQVESTGAV 618
Query: 555 ATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIA 607
+L+S+V LI+FYCS+LPSD Y P+F + + C L LP N P + +
Sbjct: 619 VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCRLQLPCNAPFEKLEG 678
Query: 608 Q--GNIKTLKQAACLEACKKLHQIGALTDNLLPD----IVVEKHDAQKRGNE-PYNAEHP 660
+++ +QA CL+ACKKLHQ+GA TD LLPD +EK + G+ P + H
Sbjct: 679 PVCSSMRLAQQAVCLDACKKLHQMGAFTDMLLPDKGSGAELEKVEQDDEGDPIPGTSRHR 738
Query: 661 IYFPPELVN----------QSPQDTKITYHCYLIEL--------KQHFNYDISARNIVLA 702
++P + + + D+ H Y+ + K F D+S I+
Sbjct: 739 EFYPEGVADILKGEWILSGKDSCDSSKLVHLYMYAIKCVNIGTSKDPFLTDVSEFAILFG 798
Query: 703 MRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNL 761
EL++E+ ++ DL + R T L G I++ +++ + F + + +++D ++
Sbjct: 799 --NELDAEVLSMSMDLFIARTVETKATLVFRGPIEVTESKLASLKSFHVRMMSIVLDVDV 856
Query: 762 DKLNEILDGFELRDNLEIDYLLLPSTG 788
+ D + YL P TG
Sbjct: 857 EPSTTPWDPAKA-------YLFAPVTG 876
Score = 339 bits (869), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 329/606 (54%), Gaps = 72/606 (11%)
Query: 834 IHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFD 888
I +V H+G+ + + + + A + F R G + ++Y +Y+++YG+ L +
Sbjct: 994 IVGRIVTAAHSGKRFYVDCIPNDMTAENSFPRKEGYLGPLEYSSYAAYYKQKYGVDLVYK 1053
Query: 889 REPLLNGRRIFHVQNYLS---------KCRQQKQKEPSKISFELPPELCRIIMAPISLST 939
++PLL GR + + +N LS + ++ + + F LPPELC + P+ S
Sbjct: 1054 KQPLLRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVF-LPPELC--FLHPLPGSL 1110
Query: 940 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESL 999
+PSIM R++S+LLAV LK+M+ +P +K+LEA+T CQE F E
Sbjct: 1111 VRGAQRLPSIMRRVESMLLAVQLKDMI------GYPVPALKILEALTAASCQETFCYERA 1164
Query: 1000 ETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD 1059
E LGD++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F
Sbjct: 1165 ELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFS 1224
Query: 1060 PKMWIIPG-----DNSGSYELNDDSLFNGRKIYVTGRKKVK------------------- 1095
P W PG D + E + S+F G +I G K
Sbjct: 1225 PSRWAAPGVLPVYDEDTNEE--ESSMF-GNEIIENGTVAAKTLAADEFEDEEAEEGELDT 1281
Query: 1096 ---------SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF--VNVPYQ-RQFQV 1143
SKT+ADVVEALIG + GG+ F+ IG++VDF Y R + +
Sbjct: 1282 DSGSYRVLSSKTMADVVEALIGVYYVDGGKYAANHFMKWIGVEVDFDFKETEYSIRPYSI 1341
Query: 1144 --HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 1201
+ R V+ L+ LN SF D LL+EA+TH S + CYQRLEF+GDAVLD+LI
Sbjct: 1342 PENVLRSVDFDKLQGALNISFNDKGLLLEAITHASRPSSGV-SCYQRLEFVGDAVLDHLI 1400
Query: 1202 TVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI-NITVDS 1260
T +L+ Y L PG LTD+R+A+VNN+ +A +VKHGLH H+ H S L K+I + ++
Sbjct: 1401 TRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDFVIEV 1460
Query: 1261 FEKLSLG--STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+LS ++FG + PK LGDI ES+AGAIF+DSGC+ VV++ +PLL PM+TP
Sbjct: 1461 KNELSKPGFNSFGLGDCKA-PKVLGDIFESIAGAIFLDSGCDTAVVWKVFQPLLHPMVTP 1519
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
ET+ HPVREL E CQ+ ++ ASR SG A TVEV +G +K A+
Sbjct: 1520 ETLPMHPVRELQERCQQQAQGLEYK-ASR-SGNIA-TVEVYVDGIQVGMAQNPQKRKMAQ 1576
Query: 1379 KVACKE 1384
KV C+E
Sbjct: 1577 KVGCQE 1582
>gi|215694849|dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1058
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 277/870 (31%), Positives = 443/870 (50%), Gaps = 75/870 (8%)
Query: 576 YFKPTPKF-HINKEMGI-CTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGA 631
+F P+P F +I+ GI C L LP N + Q + K+ ACL+AC KLH++GA
Sbjct: 2 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 61
Query: 632 LTDNLLPDIVVEKHDAQKRGNEPYNAE---------HPIYFPPELVNQSPQDTKIT---- 678
LTD LLP K+ N N H + P L P K+
Sbjct: 62 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVL---KPSGLKLDSLSN 118
Query: 679 ---YHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGR 734
Y+ I + + Y + ++ + E E+ + DL + RGR+ +KHLG+
Sbjct: 119 LHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAET----LQVDLHLARGRIVKAGIKHLGK 174
Query: 735 IQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID---YLLLPSTGQ-- 789
I +++L +FQ ++++D + + G ++ LEI+ YLLLP +
Sbjct: 175 IAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDV--TLEINSTFYLLLPIKQKCY 232
Query: 790 ----LIDWKTV----ATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCT 841
+IDW V ++ +F + + S+ + R++ G + S+V +
Sbjct: 233 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLL---DGIFSKTDVVGSVVFS 289
Query: 842 PHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHV 901
PHN + + G+L +NA ++ ++G+ TY +H++ER+ I+L +PLL ++IF++
Sbjct: 290 PHNNIFFFVDGILDEINA---WSEHSGA--TYAEHFKERFRIELSHPEQPLLKAKQIFNL 344
Query: 902 QNYL----SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
+N L + + + +E + ELPPELC + + S S + +PS+M+RL++LL
Sbjct: 345 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 404
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
+A+ LK+++L + I +LEA+TT+KC E LE E LGD+FLKY + F
Sbjct: 405 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 464
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG------ 1071
TY+ EG L+ ++ +++N+ L +L +KL +IR + F+P + PG
Sbjct: 465 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 524
Query: 1072 ------SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
+++ D+ N + K +ADVVE+LIGAFL GG FL
Sbjct: 525 VEVRLHQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHW 584
Query: 1126 IGIKVDFVNVPYQRQFQVHAERL-----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 1180
IGI VDF N R + L ++ LE L+ Y F+ LL++A H S+
Sbjct: 585 IGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFS-Q 643
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH 1240
CYQRLEFLGDAVL+Y+IT YLY+ YP + PG +TD+RS +V ND A ++V+ +H
Sbjct: 644 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 703
Query: 1241 KHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN 1300
KH++ S+ L I+ + + KLS E + PKALGDI+ES GA+ +DSG N
Sbjct: 704 KHLIKDSNHLTSAIS-KFEMYVKLSNSEKDLLEE-PACPKALGDIVESCIGAVLLDSGFN 761
Query: 1301 REVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQA 1360
V++ + LL+P++T M +P+REL E CQ + F + P + G+ V VEV
Sbjct: 762 LNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNI 821
Query: 1361 NGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++ T + + K A+K A +E L L+
Sbjct: 822 KSKIIICTAANRNSKAARKFAAQETLSKLK 851
>gi|345571082|gb|EGX53897.1| hypothetical protein AOL_s00004g556 [Arthrobotrys oligospora ATCC
24927]
Length = 1587
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 382/1396 (27%), Positives = 616/1396 (44%), Gaps = 160/1396 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL---RKP--SPFVAVFLVPK 77
R YQLE E A NTI L+TGSGKTLIA +L+R L RK SP V VFLV
Sbjct: 163 REYQLELFERAKMDNTIAVLDTGSGKTLIATLLIRWMLELELEERKSGRSPKVCVFLVNS 222
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA ++ + D +VGKY GDMG D W + W + ++V T IL + L S
Sbjct: 223 VTLVFQQAAVLECNLDAQVGKYCGDMGTDLWTKSQWDARLKSDRIIVATADILWNCLTHS 282
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ +++ I +LI DECHH + +H YA IM +FY E N PRIFGMTASP+ ++V
Sbjct: 283 FIRMSDICLLIFDECHHTKKQHAYARIMRDFYETEKE---ENRPRIFGMTASPVDARV-- 337
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D + H LE LM+S++ T ++ + + F+P + +Y +P + T L +L
Sbjct: 338 ---DPVKAAHQLERLMHSRICTTSNPAYMRKFLP--RPEEMTLEYQGVPTPVITELNSKL 392
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
+ ++T+ L ++ I S+ +LG W + ++ E +
Sbjct: 393 S--PYRNTKCLSSI------FGFIDNVASR----------DLGPWCS-DFIWQVTLTELE 433
Query: 318 FFAWEQLDGFGETIIKKFGS-----DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKI 372
E+ G ++ GS D + + + A + + +L SG + K+
Sbjct: 434 SARQERRAGTNSASNQREGSAFNLEDVDKEIQLIKEARAIVEAHEFQEPSLGSGSFSPKL 493
Query: 373 VCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRH-----CTWKTKYIAGNN 426
L+ L+ + + +CIIFV R TA +Q++ ++ +H T +
Sbjct: 494 FILLRFLVHAFDQHPEYKCIIFVTRRHTAQCIQAIFKKVFIQHGRDHLIRLGTLVGSSGQ 553
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
G + + Q + F++G+ N ++AT++ EEGLDV CNLVI FD T+ ++QSR
Sbjct: 554 HGTDSMTFRAQTLALHRFKKGVTNCLIATAVAEEGLDVPDCNLVIRFDLYDTMIKYVQSR 613
Query: 487 GRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPL-----NNHMY 541
GRAR S Y+ MV+ ++ T R+ K+ KE S LP L ++
Sbjct: 614 GRARHATSTYIHMVEQ-NNWTHKRMVQDGQEAEKIMKEFCS--KLPEDRLLDKQAPTDIF 670
Query: 542 GED-----FYHVESTGTIATLSSSVSLIYFYCSRLPS-DGYFKPTPKFHINKEMG---IC 592
G D Y V TG TL+SS+ ++ + L + +G + + + G C
Sbjct: 671 GPDPTDDMTYIVPETGAKLTLNSSMQILNQFADHLGTEEGIASEHVMYIVQAQPGHGFKC 730
Query: 593 TLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGALTDNLLP-------DIVVE 643
+ +P PI++V+ + K+ A EACKKLH L D L+P ++
Sbjct: 731 EVKMPEISPIRSVLGDTARSKGAAKRHAAFEACKKLHHGKYLDDYLMPIYTKRLRPMMAN 790
Query: 644 KH---DAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIV 700
H D+ K + P + P ++ + + P T++ C + L+ + ++ I
Sbjct: 791 AHLAVDSHKLSSYPSQIK-PSFWDRK---EPPVPTRLWATC--LTLRHPNQLEKPSQGIC 844
Query: 701 LAMRTELESEIKKVNFDLEVERG--RLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
LA R + K +F L +RG L + I N++ F F I +
Sbjct: 845 LATR---DKPPKFPSFTLYFDRGGQSLVDCVTMDDPIICDENKIKQFNEFTSRFFIDIFN 901
Query: 759 HNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVL-FPRDNGSKHNMNCSTMF 817
D E L + L L S +IDW+ V V P +N F
Sbjct: 902 KEFDIQTEKLPYWVLPIKLNKTVTSASSIDDMIDWELVMNVFKNPEENFDLATTPPEFYF 961
Query: 818 NARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVL-GHLNANSLFTRNNGSVTTYKKH 876
++ + G H + + + G NA + + S + KK
Sbjct: 962 GKFVIDRRQG-------SRRFYILDHEPKYHPYDPIPEGASNAPHTVSIIDYSYSAGKKG 1014
Query: 877 YEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPIS 936
++ G L D +P+L R+ H N+L + +++K + +++ +P R+ P
Sbjct: 1015 WQRWVG-DLPPD-QPVLIADRVLHRLNFLER-PTEREKTQNTMAYVVPSPF-RVSPLPAK 1070
Query: 937 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH- 995
T P+I+ R+ + L A ++ + V I LEAIT H
Sbjct: 1071 FCTMG--LLFPAIITRIDAYLQAYDVCKLF------KVQIDLELALEAITKDSDNTQEHD 1122
Query: 996 -------------LESLETLG----DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
E LE LG + FLK + L+ T + E V++ ++ N
Sbjct: 1123 EEPQNKRRGMVTNYERLEFLGGELNNCFLKLGTTIALYSTNPDQDEFAYHVERMVLVCNR 1182
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK---KVK 1095
+L + E +L +I++E F ++W Y + +L G+ + T + ++
Sbjct: 1183 SLYERAVELELYKYIQSEGFSRRLW---------YPMI--TLIKGKAVGKTESQRTHRLS 1231
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIF--------LDRIGIKVDFVNVPYQRQFQ---VH 1144
K++ADV EALIGA L GG ++ + ++ D+ ++ ++Q V+
Sbjct: 1232 DKSMADVCEALIGASLCGGGLDMAARMVTTLVNKSIHKVNSFKDYYSLYTLPEYQIGPVN 1291
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLIT 1202
A + +E + Y F+ P LL A TH S+ M +IP CY+RLEFLGDA++D
Sbjct: 1292 ASQQELADKIERDMGYKFKYPRLLRSAFTHPSFPTMWEKIP-CYERLEFLGDALIDMACV 1350
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE 1262
L+ ++PG P +LT+ + + +NN SVK H H+ + + V E
Sbjct: 1351 EDLWERFPGKDPQWLTEHKMSMINNRFQGALSVKLKFHTHLRAMGAHINSAVQEYVQLIE 1410
Query: 1263 KLSLGSTFG---WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPE 1319
+ + S W PK L DI+E+ GAIFVDSG N +VV R + P T
Sbjct: 1411 EARIASNDSVDYWIDAKQPPKVLPDILEAYVGAIFVDSGFNYDVVTSFFRTHVRPFFTDM 1470
Query: 1320 TM-----RFHPVRELT 1330
++ HPV LT
Sbjct: 1471 SIFDSFAGNHPVTHLT 1486
>gi|396465578|ref|XP_003837397.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
gi|312213955|emb|CBX93957.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
Length = 1588
Score = 366 bits (939), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 396/1453 (27%), Positives = 631/1453 (43%), Gaps = 226/1453 (15%)
Query: 2 EPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR---- 57
E +S+ ++ +A + R+YQ E A QNTI L+TGSGKT IA +LLR
Sbjct: 97 EQLSIREILAKQETAKRITNPRDYQTELFLRAKDQNTIAVLDTGSGKTHIATLLLRHVLE 156
Query: 58 -SYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEE 116
+ +P +A+FLV V LV QQA +K D V G MG W+ +TW +
Sbjct: 157 DELEHRATGGAPRIAIFLVDSVNLVFQQANVLKCGLDQNVESICGSMGTSLWNKSTWDKH 216
Query: 117 MSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
K+ V+V T ++L+ + S+ + I +LI DE HHA+ H YA IM ++Y + E
Sbjct: 217 FQKNMVIVCTAEVLVQCVMHSFITMAQINLLIFDEAHHAKNNHPYARIMKDYY--VQELN 274
Query: 177 DSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAK 236
S PRIFGMTASPI + SS+ Q DLE L+++K+ T E +++N I +
Sbjct: 275 LSKRPRIFGMTASPIDVRGLSSDH-IKQAASDLEKLLHAKIATIDPEKLINNSISRPDEE 333
Query: 237 FKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL 296
Y E H H A I+ K+ D+ Q I K L
Sbjct: 334 IAVYPRLESTHETPLHQA-----IKDKYG------DITAFQKFFIASKRH---------L 373
Query: 297 SELGVWLALKAAETISCYESDFFAWEQ---LDGFGETIIKKFGSDASQ----ALVTYVPS 349
ELG W + Y S FA EQ L E K D SQ A V +
Sbjct: 374 LELGPWAS-------DMYWSFAFAEEQSRKLQQREEFKYNKAKLDDSQQEWDAKVKRLKE 426
Query: 350 GAE----WSIGDDSKFNLDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQ 404
AE +++ +S + D L+ K+ L L L Y ++ RCI+FVE+ TA +L+
Sbjct: 427 AAEFVQQYTMETESISDSD---LSSKVRLLRYWLNLYYERTDEPRCIVFVEKRETARLLK 483
Query: 405 SLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
+ + + N +G + S + Q V FRRG +N I ATS+ EEGLD+
Sbjct: 484 LIFERIGGPNLHCGMLVGVNNRAGEESISLRNQILAVSSFRRGELNCIFATSVAEEGLDI 543
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
CNLV+ FD RT+ ++QSRGRAR NS YL M++ G+ + R+ + + MR+
Sbjct: 544 PQCNLVVRFDLYRTMIGYVQSRGRARHTNSKYLHMLEDGNHDHRQRVMDVRSDEVVMRQF 603
Query: 525 VLSHASLPCSPLNNHMYGED---------------FYHVESTGTIATLSSSVSLIYFYCS 569
S + + + G D +Y +G T SS+S++ + +
Sbjct: 604 CQSLSQ------DRRIDGSDEDGNDLLALSEILFPYYTDPKSGARLTYRSSLSILNHFIA 657
Query: 570 RLPSDG---------YFKPTPKFHINKEMG---ICTLYLPNNCPIQTVIAQGNIKTL--K 615
+PS +P + + IC + LP PI ++ + K L K
Sbjct: 658 VIPSPNRETMVQPTYIIRPATNYDPRNPLRSGFICEVILPEYAPIISITGKIESKKLIAK 717
Query: 616 QAACLEACKKLHQIGALTDNLLPD---IVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSP 672
+A C +L + G L +NLLP + + +A +E +P+ P Q
Sbjct: 718 CSAAFMMCLELRKRGYLDENLLPTLHRLAPARRNALLAVSEKKKGNYPMLIKPSFWKQG- 776
Query: 673 QDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKH 731
+DT + YL + D + + L R + + +F + + GR + + K
Sbjct: 777 RDT-VPDQLYLTVINVDAGLDRPHQPLGLLTRRQFP---QLPSFPIYLADGRPSHIVSKS 832
Query: 732 LGRIQLIPNQVL-LCRRFQITLFRVI----MDHNL------------DKLNEILDGFELR 774
+ + +P+++L + +F + ++ I ++N+ D++++ G +
Sbjct: 833 IPTVLPVPSEILEMITKFTLRIYEDIYNKQYEYNIQKISYWVVPVLSDQIHKSPSGTNIE 892
Query: 775 DNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSKH---NMNCSTMFNARIVHTKSGPLCT 831
D L+++ + DW ++P D K+ MN + + + + P
Sbjct: 893 DMLDMEQIRRVYKNPTWDW---TPTVYPEDLIDKYYIDPMNGGRRYYSNCIASHLTPQDP 949
Query: 832 CKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREP 891
H P Q Y T +L + ++ +R+ +P
Sbjct: 950 VPAH-----VPKQNQKYMNT-ILDYTDSRWARSRDTSRWDP----------------SQP 987
Query: 892 LLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLST-FYSFTFV-PSI 949
+L +I +N+L++ +++QKE FEL +C + +++T F +V P+I
Sbjct: 988 VLEVEKIPFRRNHLARVEEKEQKE----LFELKNYVCPQPLKISNIATPFVVMCYVLPAI 1043
Query: 950 MHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFH------------- 995
+HR +S L+A LD C + ++ + LEA+T D H
Sbjct: 1044 IHRFESYLIA-------LDACEVLDLHVSPALALEALTKDSENTDEHEEEKINFKSGMGP 1096
Query: 996 -LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK--LGCEQ----- 1047
E LE LGD FLK A S +F +E V++ ++ N L + +G ++
Sbjct: 1097 NYERLEFLGDCFLKMATSLSVFVQQPEENEFEYHVRRMLMLCNQNLMETAIGVKKVARPD 1156
Query: 1048 ------KLPGFIRTESFDPKMW------IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
+LP ++RTE+F + W +I G G + DD ++ R +
Sbjct: 1157 GTEINLELPKYVRTEAFSRRTWYPEALKLIRG--KGINKSEDD--------WLKLRHNLG 1206
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD----FVNVP--------------- 1136
K+VADV EA IGA ++ GL + + V F N P
Sbjct: 1207 DKSVADVCEAFIGAAFMEHHKH-GLWIPSQWDLAVKAVKLFANNPDHSMEKWTDYYAAYV 1265
Query: 1137 ---YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEF 1191
YQ Q A L R +E++ Y F+ P L+ A TH S YM IP YQRLEF
Sbjct: 1266 KPKYQLD-QPTAAMLDAARQIEAVHPYHFKYPRLVRSAFTHPSYAYMFEHIPN-YQRLEF 1323
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGD++LD ++LY KYP P +LT+ ++ V+N VK G H+H+ + L
Sbjct: 1324 LGDSLLDMAFIMHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHRHLKSNTAILS 1383
Query: 1252 KRIN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
+I + +D E+ + G+ W +V PK L D+IE+ A+FVDS + VV
Sbjct: 1384 TQIRDYVLEIDEAEREANGAVDYWVNVHEPPKCLADVIEAYVAALFVDSQFDFSVVQSFF 1443
Query: 1309 RPLLEPMITPETM 1321
L+P T+
Sbjct: 1444 DRHLKPFFADMTL 1456
>gi|78099743|gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
Length = 1116
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 277/869 (31%), Positives = 409/869 (47%), Gaps = 92/869 (10%)
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQ 603
Y V+STG T V+LI YC +LP D YF P P F + E G+ CTL LP N Q
Sbjct: 47 YQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQ 106
Query: 604 TVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHD--------------A 647
+++ + KQ LEACKKLHQ+G L D+L+P + E D
Sbjct: 107 SIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-LTEEPMDTDFTTADEKCISGPG 165
Query: 648 QKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTEL 707
+ E + + ++ S T TY + ++ NY VL M EL
Sbjct: 166 TTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENY----AGFVLLMEPEL 221
Query: 708 ESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD---HNLDK 763
+ ++ DL + ++ + G++QL Q+ + FQ F I H K
Sbjct: 222 DDDVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRK 281
Query: 764 LNEILD-----GFELRDNLEIDYLLLP-------STGQLIDWKTVATV------LFPRDN 805
D G E++ N E YLLLP I W+ + + L+
Sbjct: 282 SGAQRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQ 341
Query: 806 GSKHNMNCSTMFNAR------IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNA 859
G ++ + + + R I+H + L I +S+V + H G+IY + ++ A
Sbjct: 342 GDENVIPVNCIPQKRSGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTA 401
Query: 860 NSLFTR----NNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-SKCRQQKQK 914
F T++ +Y ++YGI + +PLL ++ + N L SK +
Sbjct: 402 EDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGS 461
Query: 915 -------EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLL 967
E +I +PPEL +I ++ SF +PS++HRLQSL+LA L+ +
Sbjct: 462 TGKPLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREI- 518
Query: 968 DHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
N IP +LEAITT +C E F LE LE LGDS LKY LF Y HEG L
Sbjct: 519 ---GYNQHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQL 575
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD--------NSG-------- 1071
S + + + NA L K G + L G++R +FDP+ W+ PG N G
Sbjct: 576 SDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPS 635
Query: 1072 -SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
+ DD F K G + + SKT++D VEAL+GA+ GG L + GI +
Sbjct: 636 HRRYIRDDPSFVVGKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDI 695
Query: 1131 D-----FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
V + ++ ++ LE+ L Y+F LL+EA+TH S + C
Sbjct: 696 KCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYC 755
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD+VLD L+T +LY + + PG LTD+RSA V+N+ +A + V++ +H H+ H
Sbjct: 756 YQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQH 815
Query: 1246 ASHELYKRINITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
S L +I V S E S F + PK LGDI+ES+AGA+F+D+ N ++V
Sbjct: 816 GSGILLGQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFLDTDFNVDMV 875
Query: 1305 FQSIRPLLEPMITPETMRFHPVRELTEYC 1333
++ PLL P+ITP+ + P REL E C
Sbjct: 876 WEIFEPLLSPLITPDKLALPPYRELLELC 904
>gi|242033789|ref|XP_002464289.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
gi|241918143|gb|EER91287.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
Length = 462
Score = 363 bits (932), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 277/445 (62%), Gaps = 18/445 (4%)
Query: 932 MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQ 991
MAP+S +T +SF+FVPSIM+R+Q LLL+ LK + L MQ I +K+LEA+TTK+CQ
Sbjct: 1 MAPVSANTLFSFSFVPSIMYRIQCLLLSAKLK-VQLGPRMQQFNITAMKILEALTTKECQ 59
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E F LESLETLGDSFLKY Q LF Y + L S++ E++ SN ALC+L C+ ++ G
Sbjct: 60 EKFSLESLETLGDSFLKYVTGQDLFSKYTYREDMLTSMRGEKV-SNPALCQLACKSEIVG 118
Query: 1052 FIRTESFDPKMWIIPG---DNSGSYELNDDSLF-NGRKIYVTGRKKVKSKTVADVVEALI 1107
+IR E F PK W IPG D G N+ LF +Y +KSK +AD VEAL
Sbjct: 119 YIRGELFSPKKWTIPGLGYDTRG----NNKVLFRTTNDMYSLDEIPIKSKRIADTVEALT 174
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPS 1166
GA+LS GE + F+ +G+ V+ + +R +E ++V L++++ Y F D S
Sbjct: 175 GAYLSACGELAAVHFIKSLGMDVELHSKMQVERIVSTKSEEFIDVESLQTIIGYVFDDSS 234
Query: 1167 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK-YPGLSPGYLTDMRSASV 1225
LL+EALTH SY I C +RLEFLGDAVLDY++T Y Y K YP +P LT++R ASV
Sbjct: 235 LLIEALTHSSYNTAGITTCNERLEFLGDAVLDYILTDYFYRKYYPKCTPALLTNLRKASV 294
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDI 1285
NN CYA ++VK GLHKHILH+S K++ ++S S G + GWE P+ L D+
Sbjct: 295 NNWCYAHAAVKAGLHKHILHSSS---KQMIKDLESSGPFS-GPSHGWEPGIGLPEDLADL 350
Query: 1286 IESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF--SMKKP 1343
E++AGAI+VDSG ++E V++++R LL P+ TPET+ PV EL E C+ ++ P
Sbjct: 351 FEAIAGAIYVDSGNDKEAVWRAMRRLLVPLATPETILLDPVSELKELCEHKNYPEPWYSP 410
Query: 1344 VASRISGKAAVTVEVQANGRLFEHT 1368
+G V +V+A GR + T
Sbjct: 411 TRDDAAGVTRVVAKVKAAGREYSDT 435
>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
Length = 1493
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 378/1392 (27%), Positives = 593/1392 (42%), Gaps = 194/1392 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY------AYLLRKPSPFVAVFLVP 76
R YQLE E A QNTI L+TGSGKTLIA++LL+ + KP +A FLV
Sbjct: 85 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHR-IAFFLVD 143
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V L QQA ++ + D VG ++G MG D W + W + K+ V+V T +IL L
Sbjct: 144 SVTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLN 203
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY K++ I +LI DE HH + H YA I+ + Y LE S PRIFGMTASPI +K
Sbjct: 204 SYIKMSQINILIFDEAHHTKKDHPYARIIRDSY---LEEVYSKRPRIFGMTASPIDTK-- 258
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA--LYTHLA 254
D + LE L++S++ T ++ S+L + + E P A LY HL
Sbjct: 259 ---GDIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLE 315
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
D + LE + QA SELG W + +A
Sbjct: 316 DRFGDMA-----CLEGIFRFAWQAS-----------------SELGRWCSDRAW------ 347
Query: 315 ESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA---------------EWSIGDDS 359
+ A + L ++ K S+ S + VP A ++
Sbjct: 348 -ARALADDVLPKLEGSVRKTANSETS----SNVPESAYKEILRITEASEIVKSYAFSSPE 402
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSEL-LP-RHCT 416
F G L+ K+ L E L Y G + + +CI+F ++ TA++L L L +P
Sbjct: 403 TF----GQLSPKVQVLREELARYFGRQTETKCIVFTQKRYTALILAELFQTLNIPFLRPG 458
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+G+ +G+ R++ +V+ FR G +N + ATS+ EEGLD+ CNLV+ FD
Sbjct: 459 VLIGVRSGDLAGMNITFRQQFISLVK-FRTGEINCLFATSVAEEGLDIPDCNLVVRFDLY 517
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPL 536
+T+ ++QSRGRAR NS Y MV+ G+ + RL + KM + +LP L
Sbjct: 518 QTLIQYVQSRGRARHFNSTYASMVERGNLEHEQRLLE-VQDAEKMMQSFCR--TLPEDRL 574
Query: 537 NNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+YG D + ++STG T S+ +++ Y S L + F
Sbjct: 575 ---LYGFDHDLDTVLQKDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVT 631
Query: 583 FHINKEMG--ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNL-- 636
+ + G +C + LP PI+ + +K K++A + C L + L D+
Sbjct: 632 YVVLPINGAFVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHFNS 691
Query: 637 -----LPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN 691
LP + +A+ +++ + P L + H I
Sbjct: 692 IYHRRLPAM----RNAKLAITSKRTSQYDMISKPSLWGRKQGMPPKELHGTFITFLPSMQ 747
Query: 692 YDISARNIVLAMRTELESEIK-KVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI 750
++L R L + + D +VE +T L+ ++ L +V F +
Sbjct: 748 LSHEPAPLLLFTRERLPHFPEFPIFLDDDVETTIITTPLEK--QLLLSEKEVDALTVFTL 805
Query: 751 TLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGS--- 807
+FR + DK E + + ++ YL Q++DW+++ V RDN S
Sbjct: 806 RVFRDVFHKTYDKEPEKMAYWLAPAKVQSSYLPSYDPRQILDWESLTYV---RDNDSIPF 862
Query: 808 KHNMNCSTMFNARIVHTKSGP--LCTCKIHNSLVCTPHNGQIYCITGVLGHLN--ANSLF 863
N + + + + G T + +SL + H+N N
Sbjct: 863 STNADPESWVDLFVFDAWDGRCRFFTVGVEHSLTPS---SPPPPFVARRRHMNDVMNYCL 919
Query: 864 TRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFEL 923
+ + S + + C +P+L + +N L K ++ ++ +
Sbjct: 920 SLSKNSRAKF---------LSTCHWDQPVLRAELVRLRRNLLDKMTDTERDVETRCFICI 970
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE 983
P + ++ I ST +S P+I+ R+ + L+++ L N T+ LE
Sbjct: 971 EP----LKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLALE 1020
Query: 984 AITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSV 1029
A T D H E LE LGD FLK A S LF ++ E V
Sbjct: 1021 AFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHV 1080
Query: 1030 KKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG----RK 1085
+ +I N L ++++ +IR+ F W G L G RK
Sbjct: 1081 NRMCLICNKNLFNAAVDKEIYKYIRSRGFSRHTWYPEGLK----------LLQGKDHSRK 1130
Query: 1086 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIKV 1130
+ + KT+ADV EALIGA L +GG + +R +
Sbjct: 1131 ATTESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYI 1190
Query: 1131 DFVNVP-YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQ 1187
F +P YQR+ AE ++ R +E L+Y FR P+LL A TH SY ++P CYQ
Sbjct: 1191 SFYTIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQ 1248
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGD+++D + L+ ++P P +LT+ + A V+N +VK GLH H+ + S
Sbjct: 1249 RLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFS 1308
Query: 1248 HELYKRINI---TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
L +I + + E S G+ W PK L D++E+ GA+FVDS N EV+
Sbjct: 1309 APLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVI 1368
Query: 1305 FQSIRPLLEPMI 1316
+ R ++P
Sbjct: 1369 ERFFRDYIKPFF 1380
>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
Length = 1883
Score = 358 bits (920), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 278/835 (33%), Positives = 422/835 (50%), Gaps = 146/835 (17%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA-YLLRKPSPFVAVFLVPKVVL 80
AR YQLE LE A +NTI FLETG+GKTLIA++L++S +L++ +AVFLVPKV L
Sbjct: 267 ARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLVPKVPL 326
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V ++VLVMT QILL+ LR S K
Sbjct: 327 V--------------------------------------YQVLVMTAQILLNILRHSIIK 348
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
++ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K +S++
Sbjct: 349 MDAIHLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKRPAVFGMTASPVNLKGVTSQE 405
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL------A 254
D KI +LE+ ++S V T L +P Y +L+ +
Sbjct: 406 DCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMESTV 465
Query: 255 DELAMIELKHTR----------SLENLDL---------NEAQAELIRKKVSKINSTLLYC 295
+E A+ K T+ S + L L ++ A LI +K+ IN Y
Sbjct: 466 EEAALSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLI-QKLRAIN----YA 520
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKK--------------FGSDA 339
L ELG W A K A++ ++ ++D A Q+D F E+ +KK S+
Sbjct: 521 LGELGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSET 580
Query: 340 SQALVTYVPSG-----AEWSIGDDSKFNLD--------SGLLTEKIVCLIESLLEYRGVE 386
S + E + D ++D G +T ++ LI+ LL+Y+ E
Sbjct: 581 SDVEMQNTEKHNTNDLEEGELPDSHGEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTE 640
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR 446
D R IIFVERV+TA+VL +L+EL P + + G+N+ + ++ + Q+ I +FR
Sbjct: 641 DFRAIIFVERVVTALVLPKVLAEL-PSLSFIRCASLIGHNNNQEMRACQMQDTI-SKFRD 698
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+ +
Sbjct: 699 GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNIS 758
Query: 507 TQSRLENYLASGNKMRKEVLSHASLP-------CSPLNNHMYGEDFYHVESTGTIATLSS 559
++ L N S +RKE + L SP++ Y VESTG + +L+S
Sbjct: 759 HETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTS--PGSMYQVESTGAVVSLNS 816
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINK--EMG-----ICTLYLPNNCPIQTVIAQ--GN 610
+V LI+FYCS+LPSD Y P+F + K + G C L LP N P + + +
Sbjct: 817 AVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSS 876
Query: 611 IKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE----PYNAEHPIYFPPE 666
I+ +QA CL ACKKLH++GA TD LLPD + + ++ +E P A H ++P
Sbjct: 877 IRLAQQAVCLAACKKLHEMGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEG 936
Query: 667 LVN--------------QSPQDTKI---TYHCYLIEL-KQHFNYDISARNIVLAMRTELE 708
+ + Q+ Q K+ + +C + K F +S N + EL+
Sbjct: 937 VADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDSFVTQLS--NFAIIFGNELD 994
Query: 709 SEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
+E+ DL V R +T +L GRI++ +Q++L + F + L +++D ++D
Sbjct: 995 AEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVD 1049
Score = 320 bits (821), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 322/603 (53%), Gaps = 67/603 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++NA + F R G + ++Y +Y+++YG++L + ++PL
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKIS--------FELPPELCRIIMAPISLSTFYSFT 944
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLAV LK+++ + +P K+LEA+T CQE F E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETFCYERAELLGD 1360
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 1065 IPG------DNSGSYE------------------------LNDDSLFNGRKIYVTGRKKV 1094
PG + S YE + +D G + + +
Sbjct: 1421 APGVLPVFDEESREYEPSIFDEESTGCELQKESYDDYADNMQEDGEIEGDS---SCYRVL 1477
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYQRQFQVHAE--RLVN 1150
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK--LSLG- 1267
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L +I V ++ L G
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
++FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVR
Sbjct: 1657 NSFGLGDCKA-PKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
EL E CQ+ ++ ASR A TVEV +G + KK A+K+A + L
Sbjct: 1716 ELQERCQQQAEGLEYK-ASRAGNIA--TVEVFVDGVQI-GVAQNPQKKMAQKLAARNALV 1771
Query: 1388 SLR 1390
L+
Sbjct: 1772 VLK 1774
>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1525
Score = 358 bits (920), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 374/1392 (26%), Positives = 592/1392 (42%), Gaps = 195/1392 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY------AYLLRKPSPFVAVFLVP 76
R YQLE E A QNTI L+TGSGKTLIA++LL+ + KP +A FLV
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHR-IAFFLVD 176
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V L QQA ++ + D VG ++G MG D W + W + K+ V+V T +IL L
Sbjct: 177 SVTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLN 236
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY K++ I +LI DE HH + H YA I+ + Y LE S PRIFGMTASPI +K
Sbjct: 237 SYIKMSQINILIFDEAHHTKKDHPYARIIRDSY---LEEVYSKRPRIFGMTASPIDTK-- 291
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA--LYTHLA 254
D + LE L++S++ T ++ S+L + + E P A LY HL
Sbjct: 292 ---GDIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLE 348
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
D + LE + QA SELG W + +A
Sbjct: 349 DRFGDMA-----CLEGIFRFAWQAS-----------------SELGRWCSDRAW------ 380
Query: 315 ESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA---------------EWSIGDDS 359
+ A + L ++ K S+ S + VP A ++
Sbjct: 381 -ARALADDVLPKLEGSVRKTANSETS----SNVPESAYKEILRITEASEIVKSYAFSSPE 435
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSEL-LP-RHCT 416
F G L+ K+ L E L Y G + + +CI+F ++ TA++L L L +P
Sbjct: 436 TF----GQLSPKVQVLREELARYFGRQTETKCIVFTQKRYTALILAELFQTLNIPFLRPG 491
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+G+ +G+ R++ +V+ FR G +N + ATS+ EEGLD+ CNLV+ FD
Sbjct: 492 VLIGVRSGDLAGMNITFRQQFISLVK-FRTGEINCLFATSVAEEGLDIPDCNLVVRFDLY 550
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPL 536
+T+ ++QSRGRAR NS Y MV+ G+ + RL +++ + + P
Sbjct: 551 QTLIQYVQSRGRARHFNSTYASMVERGNLEHEQRLL-------EVQDAEMMQSFCRTLPE 603
Query: 537 NNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+ +YG D + ++STG T S+ +++ Y S L + F
Sbjct: 604 DRLLYGFDHDLDTVLQKDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVT 663
Query: 583 FHINKEMG--ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNL-- 636
+ + G +C + LP PI+ + +K K++A + C L + L D+
Sbjct: 664 YVVLPINGAFVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHFNS 723
Query: 637 -----LPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN 691
LP + +A+ +++ + P L + H I
Sbjct: 724 IYHRRLPAM----RNAKLAITSKRTSQYDMISKPSLWGRKQGMPPKELHGTFITFLPSMQ 779
Query: 692 YDISARNIVLAMRTELESEIK-KVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI 750
++L R L + + D +VE +T L+ ++ L +V F +
Sbjct: 780 LSHEPAPLLLFTRERLPHFPEFPIFLDDDVETTIITTPLEK--QLLLSEKEVDALTVFTL 837
Query: 751 TLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGS--- 807
+FR + DK E + + ++ YL Q++DW+++ V RDN S
Sbjct: 838 RVFRDVFHKTYDKEPEKMAYWLAPAKVQSSYLPSYDPRQILDWESLTYV---RDNDSIPF 894
Query: 808 KHNMNCSTMFNARIVHTKSGP--LCTCKIHNSLVCTPHNGQIYCITGVLGHLN--ANSLF 863
N + + + + G T + +SL + H+N N
Sbjct: 895 STNADPESWVDLFVFDAWDGRCRFFTVGVEHSLTPS---SPPPPFVARRRHMNDVMNYCL 951
Query: 864 TRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFEL 923
+ + S + + C +P+L + +N L K ++ ++ +
Sbjct: 952 SLSKNSRAKF---------LSTCHWDQPVLRAELVRLRRNLLDKMTDTERDVETRCFICI 1002
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE 983
P + ++ I ST +S P+I+ R+ + L+++ L N T+ LE
Sbjct: 1003 EP----LKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLALE 1052
Query: 984 AITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSV 1029
A T D H E LE LGD FLK A S LF ++ E V
Sbjct: 1053 AFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHV 1112
Query: 1030 KKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG----RK 1085
+ +I N L ++++ +IR+ F W G L G RK
Sbjct: 1113 NRMCLICNKNLFNAAVDKEIYKYIRSRGFSRHTWYPEGLK----------LLQGKDHSRK 1162
Query: 1086 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL---------------DRIGIKV 1130
+ + KT+ADV EALIGA L +GG + +R +
Sbjct: 1163 ATTESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYI 1222
Query: 1131 DFVNVP-YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQ 1187
F +P YQR+ AE ++ R +E L+Y FR P+LL A TH SY ++P CYQ
Sbjct: 1223 SFYTIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQ 1280
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGD+++D + L+ ++P P +LT+ + A V+N +VK GLH H+ + S
Sbjct: 1281 RLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFS 1340
Query: 1248 HELYKRINI---TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
L +I + + E S G+ W PK L D++E+ GA+FVDS N EV+
Sbjct: 1341 APLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVI 1400
Query: 1305 FQSIRPLLEPMI 1316
+ R ++P
Sbjct: 1401 ERFFRDYIKPFF 1412
>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
distachyon]
Length = 1888
Score = 358 bits (919), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 282/878 (32%), Positives = 433/878 (49%), Gaps = 156/878 (17%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA-YLLRKPSPFVAVFLVPKVVL 80
AR+YQLE LE A +NTI FLETG+GKTLIA++L++S +L++ +AVFLVPKV L
Sbjct: 270 ARHYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSICDKMLKENKKMLAVFLVPKVPL 329
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V ++VLVMT QILL+ LR S K
Sbjct: 330 V--------------------------------------YQVLVMTAQILLNILRHSIIK 351
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
++ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K +S++
Sbjct: 352 MDAIHLLILDECHHAVKKHPYSLVMSEFYH---TTPKDKRPVVFGMTASPVNLKGVTSQE 408
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL------A 254
D KI +LE+ ++S V T L +P Y +L+ +
Sbjct: 409 DCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPFEVVIHYDKAATLCSLHERIKQMEAAV 468
Query: 255 DELAMIELKHTR----------SLENLDL---------NEAQAELIRKKVSKINSTLLYC 295
+E A+ K TR S E L L ++ A LI +K+ IN Y
Sbjct: 469 EEAALSSSKRTRWQFMGARDAGSREELRLVYGVSERTESDGAANLI-QKLRAIN----YG 523
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKF------------------ 335
L ELG W A K A++ ++ ++D A Q+D F E+ +KK
Sbjct: 524 LGELGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSET 583
Query: 336 ---------GSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE 386
++S+ +P + + + G +T ++ LI+ LL+Y+ E
Sbjct: 584 NDVEMHSTENHNSSELEDGELPDSHGEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTE 643
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR 446
D R IIFVERV+TA+VL + +EL P + + G+N+ + ++ + Q+ I + FR
Sbjct: 644 DFRAIIFVERVVTALVLPKVFAEL-PSLSFIRCASLIGHNNNQEMRTSQMQDTIAK-FRD 701
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G + ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LMV+ + +
Sbjct: 702 GRITLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERANLS 761
Query: 507 TQSRLENYLASGNKMRKEVLSHASLP---CSPLNN--HMYGEDFYHVESTGTIATLSSSV 561
++ L N S +RKE + L P+ N H + Y VESTG + +L+S+V
Sbjct: 762 HETFLRNARNSEETLRKEAIERTDLSHLDGIPMLNPIHTSPDSMYQVESTGAVVSLNSAV 821
Query: 562 SLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQ--GNIK 612
LI+FYCS+LPSD Y P+F + K C L LP N P + + +I+
Sbjct: 822 GLIHFYCSQLPSDRYSILRPEFIMQKHEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIR 881
Query: 613 TLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE----PYNAEHPIYFPPELV 668
+QA CL ACKKLH++ A TD LLPD + + + ++ +E P A H ++P +
Sbjct: 882 LAQQAVCLAACKKLHEMSAFTDMLLPDRGIGEGEKTEQNDEGDPVPGTARHREFYPEGVA 941
Query: 669 N--------------QSPQDTKI-TYHCYLIEL---KQHFNYDISARNIVLAMRTELESE 710
QS Q K+ Y+ +++ K F +S +IV EL++E
Sbjct: 942 EVLRGEWILSGRDCCQSSQFIKLYMYYVNCVDVGTSKDPFLAQLSNFSIVFG--NELDAE 999
Query: 711 IKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILD 769
+ + DL V + +T +L G I++ Q++L + F + L +++D ++D D
Sbjct: 1000 VLSMTMDLFVAKTMITKASLVFHGPIEITERQLVLLKSFHVRLMSIVLDVDVDPSTTPWD 1059
Query: 770 GFELRDNLEIDYLLLPSTGQL-------IDWKTVATVL 800
+ YL +P + IDW V +++
Sbjct: 1060 PAKA-------YLFVPVGAEKCTDAFREIDWTLVNSIV 1090
Score = 322 bits (826), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 328/607 (54%), Gaps = 73/607 (12%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++NA + F R G + ++Y +Y+++YG++L + ++PL
Sbjct: 1192 VVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYTKQPL 1251
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE----------LPPELCRIIMAPISLSTFYS 942
+ R + + +N LS R + + ++F LPPELC ++ P+ S
Sbjct: 1252 IRARGVSYCKNLLSP-RFEHSEAKEGVNFSENHDKTYYVYLPPELC--VVHPLPGSLVRG 1308
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETL 1002
+PSIM R++S+LLAV LK ++ + +P K+LEA+T CQE F E E L
Sbjct: 1309 AQRLPSIMRRVESMLLAVQLKEII------DYPVPATKILEALTAASCQETFCYERAELL 1362
Query: 1003 GDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM 1062
GD++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P
Sbjct: 1363 GDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALNKTLQSYIQADRFAPSR 1422
Query: 1063 WIIPG-------------------------------DNSGSYELNDDSLFNGRKIYVTGR 1091
W PG D+ + + +D +G +G
Sbjct: 1423 WAAPGVLPVFDEETRESEPSIFGEEPVLGNEVQKDFDDDYADSIQEDGEIDGD----SGC 1478
Query: 1092 KKV-KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYQRQFQVHAE-- 1146
+V SKT+ADVVEALIG + GG+ + IGI ++D +P + + +
Sbjct: 1479 YRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPQEIPPPKIYNIPDSIM 1538
Query: 1147 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
R +N LES++ F++ LVEA+TH S + CYQRLEF+GDAVLD+LIT +L+
Sbjct: 1539 RSINFDTLESIMGIKFQNKGFLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLF 1597
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV-DSFEKLS 1265
Y L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L +I V D E++S
Sbjct: 1598 FTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVREEIS 1657
Query: 1266 LG--STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
++FG + PK LGDIIES+AGAIF+DSG + V++ +PLL+PM+TPET+
Sbjct: 1658 KSGFNSFGLGDCKA-PKVLGDIIESIAGAIFLDSGYDTSAVWKVFQPLLDPMVTPETLPM 1716
Query: 1324 HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACK 1383
HP+REL E CQ+ ++ ASR A TVEV +G + + KK A+K+A +
Sbjct: 1717 HPIRELQERCQQQAEGLEYK-ASRAGNVA--TVEVFVDG-IQIGVAQNPQKKMAQKLAAR 1772
Query: 1384 EVLKSLR 1390
L L+
Sbjct: 1773 NALVVLK 1779
>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
Length = 1883
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 286/880 (32%), Positives = 435/880 (49%), Gaps = 160/880 (18%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA-YLLRKPSPFVAVFLVPKVVL 80
AR YQLE LE A +NTI FLETG+GKTLIA++L++S +L++ +AVFLVPKV L
Sbjct: 267 ARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLVPKVPL 326
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V ++VLVMT QILL+ LR S K
Sbjct: 327 V--------------------------------------YQVLVMTAQILLNILRHSIIK 348
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
++ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K +S++
Sbjct: 349 MDAIHLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKRPAVFGMTASPVNLKGVTSQE 405
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL------A 254
D KI +LE+ ++S V T L +P Y +L+ +
Sbjct: 406 DCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMESTV 465
Query: 255 DELAMIELKHTR----------SLENLDL---------NEAQAELIRKKVSKINSTLLYC 295
+E A+ K T+ S + L L ++ A LI +K+ IN Y
Sbjct: 466 EEAALSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLI-QKLRAIN----YA 520
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKK--------------FGSDA 339
L ELG W A K A++ ++ ++D A Q+D F E+ +KK S+
Sbjct: 521 LGELGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSET 580
Query: 340 SQALVTYVPSG-----AEWSIGDDSKFNLD--------SGLLTEKIVCLIESLLEYRGVE 386
S + E + D ++D G +T ++ LI+ LL+Y+ E
Sbjct: 581 SDVEMQNTEKHNTNDLEEGELPDSHGEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTE 640
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR 446
D R IIFVERV+TA+VL +L+EL P + + G+N+ + ++ + Q+ I +FR
Sbjct: 641 DFRAIIFVERVVTALVLPKVLAEL-PSLSFIRCASLIGHNNNQEMRACQMQDTI-SKFRD 698
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+ +
Sbjct: 699 GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNIS 758
Query: 507 TQSRLENYLASGNKMRKEVLSHASLP-------CSPLNNHMYGEDFYHVESTGTIATLSS 559
++ L N S +RKE + L SP++ Y VESTG + +L+S
Sbjct: 759 HETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTS--PGSMYQVESTGAVVSLNS 816
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINK--EMG-----ICTLYLPNNCPIQTVIAQ--GN 610
+V LI+FYCS+LPSD Y P+F + K + G C L LP N P + + +
Sbjct: 817 AVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSS 876
Query: 611 IKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE----PYNAEHPIYFPPE 666
I+ +QA CL ACKKLH++GA TD LLPD + + ++ +E P A H ++P
Sbjct: 877 IRLAQQAVCLAACKKLHEMGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEG 936
Query: 667 LVN--------------QSPQDTKI---TYHCYLIEL-KQHFNYDISARNIVLAMRTELE 708
+ + Q+ Q K+ + +C + K F +S N + EL+
Sbjct: 937 VADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQLS--NFAIIFGNELD 994
Query: 709 SEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEI 767
+E+ DL V R +T +L GRI++ +Q++L + F + L +++D ++D
Sbjct: 995 AEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVDPSTTP 1054
Query: 768 LDGFELRDNLEIDYLLLPSTGQL-------IDWKTVATVL 800
D + YL +P + IDW V ++
Sbjct: 1055 WDPAKA-------YLFVPVGAEKCTDPLREIDWTLVNNIV 1087
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/603 (34%), Positives = 321/603 (53%), Gaps = 67/603 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++NA + F R G + ++Y +Y+++YG++L + ++PL
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKIS--------FELPPELCRIIMAPISLSTFYSFT 944
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLAV LK+++ + +P K+LEA+T CQE E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETLCYERAELLGD 1360
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 1065 IPG------DNSGSYE------------------------LNDDSLFNGRKIYVTGRKKV 1094
PG + S YE + +D G + + +
Sbjct: 1421 APGVLPVFDEESREYEPSIFDEESTGCELQKESYDDYADNMQEDGEIEGDS---SCYRVL 1477
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYQRQFQVHAE--RLVN 1150
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK--LSLG- 1267
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L +I V ++ L G
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
++FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVR
Sbjct: 1657 NSFGLGDCKA-PKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
EL E CQ+ ++ ASR A TVEV +G + KK A+K+A + L
Sbjct: 1716 ELQERCQQQAEGLEYK-ASRAGNIA--TVEVFVDGVQI-GVAQNPQKKMAQKLAARNALV 1771
Query: 1388 SLR 1390
L+
Sbjct: 1772 VLK 1774
>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=OsDCL1
gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
sativa Japonica Group]
Length = 1883
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 286/880 (32%), Positives = 435/880 (49%), Gaps = 160/880 (18%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA-YLLRKPSPFVAVFLVPKVVL 80
AR YQLE LE A +NTI FLETG+GKTLIA++L++S +L++ +AVFLVPKV L
Sbjct: 267 ARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLVPKVPL 326
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V ++VLVMT QILL+ LR S K
Sbjct: 327 V--------------------------------------YQVLVMTAQILLNILRHSIIK 348
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
++ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K +S++
Sbjct: 349 MDAIHLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKRPAVFGMTASPVNLKGVTSQE 405
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL------A 254
D KI +LE+ ++S V T L +P Y +L+ +
Sbjct: 406 DCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMESTV 465
Query: 255 DELAMIELKHTR----------SLENLDL---------NEAQAELIRKKVSKINSTLLYC 295
+E A+ K T+ S + L L ++ A LI +K+ IN Y
Sbjct: 466 EEAALSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLI-QKLRAIN----YA 520
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKK--------------FGSDA 339
L ELG W A K A++ ++ ++D A Q+D F E+ +KK S+
Sbjct: 521 LGELGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSET 580
Query: 340 SQALVTYVPSG-----AEWSIGDDSKFNLD--------SGLLTEKIVCLIESLLEYRGVE 386
S + E + D ++D G +T ++ LI+ LL+Y+ E
Sbjct: 581 SDVEMQNTEKHNTNDLEEGELPDSHGEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTE 640
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR 446
D R IIFVERV+TA+VL +L+EL P + + G+N+ + ++ + Q+ I +FR
Sbjct: 641 DFRAIIFVERVVTALVLPKVLAEL-PSLSFIRCASLIGHNNNQEMRACQMQDTI-SKFRD 698
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+ +
Sbjct: 699 GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNIS 758
Query: 507 TQSRLENYLASGNKMRKEVLSHASLP-------CSPLNNHMYGEDFYHVESTGTIATLSS 559
++ L N S +RKE + L SP++ Y VESTG + +L+S
Sbjct: 759 HETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTS--PGSMYQVESTGAVVSLNS 816
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINK--EMG-----ICTLYLPNNCPIQTVIAQ--GN 610
+V LI+FYCS+LPSD Y P+F + K + G C L LP N P + + +
Sbjct: 817 AVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSS 876
Query: 611 IKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE----PYNAEHPIYFPPE 666
I+ +QA CL ACKKLH++GA TD LLPD + + ++ +E P A H ++P
Sbjct: 877 IRLAQQAVCLAACKKLHEMGAFTDTLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEG 936
Query: 667 LVN--------------QSPQDTKI---TYHCYLIEL-KQHFNYDISARNIVLAMRTELE 708
+ + Q+ Q K+ + +C + K F +S N + EL+
Sbjct: 937 VADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQLS--NFAIIFGNELD 994
Query: 709 SEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEI 767
+E+ DL V R +T +L GRI++ +Q++L + F + L +++D ++D
Sbjct: 995 AEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVDPSTTP 1054
Query: 768 LDGFELRDNLEIDYLLLPSTGQL-------IDWKTVATVL 800
D + YL +P + IDW V ++
Sbjct: 1055 WDPAKA-------YLFVPVGAEKCTDPLREIDWTLVNNIV 1087
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/603 (34%), Positives = 321/603 (53%), Gaps = 67/603 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++NA + F R G + ++Y +Y+++YG++L + ++PL
Sbjct: 1189 VVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPL 1248
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKIS--------FELPPELCRIIMAPISLSTFYSFT 944
+ R + + +N LS + S LPPELC ++ P+ S
Sbjct: 1249 IRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 1306
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLAV LK+++ + +P K+LEA+T CQE E E LGD
Sbjct: 1307 RLPSIMRRVESMLLAVQLKDII------DYPVPATKILEALTAASCQETLCYERAELLGD 1360
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 1361 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWA 1420
Query: 1065 IPG------DNSGSYE------------------------LNDDSLFNGRKIYVTGRKKV 1094
PG + S YE + +D G + + +
Sbjct: 1421 APGVLPVFDEESREYEPSIFDEESTGCELQKESYDDYADNMQEDGEIEGDS---SCYRVL 1477
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYQRQFQVHAE--RLVN 1150
SKT+ADVVEALIG + GG+ + IGI ++D +P + + + R +N
Sbjct: 1478 SSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSIN 1537
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
L+ +L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1538 FDTLKGVLGIEFQNKGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITRHLFFTYT 1596
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK--LSLG- 1267
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L +I V ++ L G
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
++FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVR
Sbjct: 1657 NSFGLGDCKA-PKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVR 1715
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
EL E CQ+ ++ ASR A TVEV +G + KK A+K+A + L
Sbjct: 1716 ELQERCQQQAEGLEYK-ASRAGNIA--TVEVFVDGVQI-GVAQNPQKKMAQKLAARNALV 1771
Query: 1388 SLR 1390
L+
Sbjct: 1772 VLK 1774
>gi|212723814|ref|NP_001131630.1| uncharacterized protein LOC100192986 [Zea mays]
gi|194692090|gb|ACF80129.1| unknown [Zea mays]
Length = 365
Score = 358 bits (918), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/367 (47%), Positives = 253/367 (68%), Gaps = 15/367 (4%)
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRK 1085
+L+ K+ +ISNAALC+L C L G+IR+E+F+PK WI+PG Y++ D SL
Sbjct: 1 MLTKMKKNVISNAALCQLACSNNLVGYIRSEAFNPKTWIVPGVG---YDICDRSL----- 52
Query: 1086 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA 1145
+K+KSK +AD VEALIGA+LST GE IFL +G+ ++F +P +R + A
Sbjct: 53 ------RKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGMDIEFHKMPIERVITIKA 106
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
E +NV+ LE LL+YSF DPSLL+EALTHGSY + CYQRLEFLGDAVLD++ T Y
Sbjct: 107 EEFINVKSLELLLDYSFNDPSLLMEALTHGSYQIAGTTPCYQRLEFLGDAVLDHIFTDYF 166
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
Y++YP +P LTD+RSASVNN CYA ++VK GLHKH+LH+S L+KR+ +D FE+
Sbjct: 167 YHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHVLHSSSALHKRMADYLDKFEQSF 226
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHP 1325
G + GWE+ S PK LGD++ES+AGAI++D+ ++ VV++S++ +LEP++TP+T++ P
Sbjct: 227 SGPSHGWEAGISLPKVLGDVVESIAGAIYIDAKHDKGVVWRSMKRILEPLVTPDTLQNDP 286
Query: 1326 VRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEV 1385
V+EL E+C ++++ V +R +G ++V EV+ G ++ T K AKK+A V
Sbjct: 287 VKELQEFCDSKGYTLEYTV-TRDNGVSSVVAEVRTEGTTYKATRTGFSKLDAKKLAASSV 345
Query: 1386 LKSLRAS 1392
L+ L+A+
Sbjct: 346 LRDLKAA 352
>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1537
Score = 353 bits (906), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 397/1474 (26%), Positives = 624/1474 (42%), Gaps = 190/1474 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY-----LLRKPSPFVAVFLVPK 77
R YQ+E E A QNTI L+TGSGKTLIA++LLR + V+ FLV
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDS 186
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V L QQA ++ + D V ++G MG D WD TW + + ++ V+V T +IL L S
Sbjct: 187 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNS 246
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y +++ I +LI DE HHA+ H YA I+ + Y + S PR+FGMTASPI +K
Sbjct: 247 YVRMDQINLLIFDEAHHAKKDHPYARIIRDSY---FKAQPSQRPRVFGMTASPIDTK--- 300
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D + LET ++S++ T + ++L + K Y E P A
Sbjct: 301 --GDITEAATRLETFLDSRIATTSKITLLREVVSRPIEKVWAYNRLEPPFAT-------- 350
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK-------AAET 310
+ +L TR N+ + E S++ +C S+ W AL
Sbjct: 351 ELYKLMDTR-YGNIKVLEGVYRFAWNASSELGK---WC-SDRAWWHALADDVLPKLEGNI 405
Query: 311 ISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE 370
ES+ E F + I + +AS+ + Y + E G L+
Sbjct: 406 NKLIESNTMKAEHGAVFKDIIRIR---EASETVKNYFFTDPELP-----------GELSP 451
Query: 371 KIVCL-IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSG 428
K+ L +E + +CI+F ++ TA +L L + L +P + + G
Sbjct: 452 KVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIPNLRPGVLIGVRPGDIG 511
Query: 429 IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR 488
+ ++Q + +FR G +N + ATS+ EEGLD+ CNLVI FD RT+ ++QSRGR
Sbjct: 512 GMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRGR 571
Query: 489 ARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSPLNNHMY----- 541
AR S Y +MV+ ++ + RL+ + N MR+ E+L + N+H
Sbjct: 572 ARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHG--NDHDLDSFLQ 629
Query: 542 ---GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF--HINKEMGICTLYL 596
G + V+STG T S+++++ Y S L + P + I +C + L
Sbjct: 630 EEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVTIASNAYVCEVIL 689
Query: 597 PNNCPIQTVIAQGNIK--TLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGN-- 652
P PI+ + ++ K++A + C L + L D I + A +
Sbjct: 690 PEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRK-NRLLDGYFNSIYHRRLPAMRNAKLA 748
Query: 653 ---EPYNAEHPIYFPPELVNQ--SPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTEL 707
+ NA + P Q +P +T H L+ K R I+L R +L
Sbjct: 749 ITCKRTNAYDMLLKPSIWAKQRTTPTETFYGIHMSLLPSKP---LSRDHRPILLLTREKL 805
Query: 708 -ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI--TLFRVIMDHNLDKL 764
E + D +VE L+ LKH +I + Q L +I +F + +H + K+
Sbjct: 806 PEFPAFSIYLDEDVETKVLSYPLKHGLQISVDKLQSLTVFTLRIFRDIFHKVYEHEVQKM 865
Query: 765 NEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
L E D + IDW TV+ V + N+N ++ N I
Sbjct: 866 PYWLAPAEAIDGRGSG----KNPRDCIDWDTVSFVHNNDEITFTRNLNPESLVNRFIFDN 921
Query: 825 KSGPL--CTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYG 882
G T + ++L + + ++ +L + K+ R+
Sbjct: 922 WDGRFRYFTVAVADTLQPSDPPPPSVPRRRYMNNIMNYTL---------SLSKNSRARF- 971
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQK---------EPSKISFELPPELCRIIMA 933
+ C +P+L + +N L K Q+++ EP +IS LPP +
Sbjct: 972 LSSCDWNQPVLQAELVRLRRNLLDKMTTQEKEMQTECFICAEPLRIS-ALPPSI------ 1024
Query: 934 PISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQED 993
+ST +F P+I+ RL S L+A+ + L + I LEA T +
Sbjct: 1025 ---VSTCLAF---PAIISRLDSYLIALEACDEL------ELVIRPDFALEAFTKDSDNTE 1072
Query: 994 FH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
H E LE LGD FLK A S LF N+ E V + +I N
Sbjct: 1073 EHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKN 1132
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR----KIYVTGRKKVK 1095
L ++++ +IR+ F +W G +L +G+ K+ G+ +
Sbjct: 1133 LFNTAIKKQIYRYIRSRGFSRHIWYPDGL----------TLLHGKDHSTKLLSEGKHALG 1182
Query: 1096 SKTVADVVEALIGAFLSTGGENVGL--------IFLD----RIGIKVDFVNVPYQRQFQV 1143
KT+ADV EALIGA L +GG +D R+ +++ + ++Q
Sbjct: 1183 EKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKYQT 1242
Query: 1144 HAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGD 1194
R RH+E L Y F P LL A+TH S Y +P CYQRLEFLGD
Sbjct: 1243 EKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVP----CYQRLEFLGD 1298
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
++LD + L+ ++P P +L++ + A V+N SVK G H+ I+ S+ L +I
Sbjct: 1299 SLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQI 1358
Query: 1255 NITVDSFEKL---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV----FQS 1307
V+ E S G+ W PK L D++E+ GAIFVDS + +V+ +
Sbjct: 1359 THYVEEIETAQAESQGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIEAFFERQ 1418
Query: 1308 IRPLLEPMITPETM-RFHPV----RELTEYCQKNHFSMKKPVASRISGK-AAVTVEVQAN 1361
I+P E M +T HP +LT ++ +K I G A V V +
Sbjct: 1419 IKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNYCLKAGELPTIDGAPATVLAAVIVH 1478
Query: 1362 GRLFEHTFLDADKKTAKKVACKEVLKSLRASFPG 1395
G + + + AK A ++ L L P
Sbjct: 1479 GNVISEA-RSSSSRYAKITASEKALAVLDGLLPS 1511
>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
Length = 1538
Score = 353 bits (906), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 388/1386 (27%), Positives = 597/1386 (43%), Gaps = 179/1386 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-------KPSPFVAVFLV 75
R YQ+E E A QNTI L+TGSGKTLIA++LLR + L KP V+ FLV
Sbjct: 128 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLR-HTILNELDNRANGKPHR-VSFFLV 185
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
V L QQA ++ + D V ++G MG D WD TW E + ++ V+V T +IL L
Sbjct: 186 DSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDEHLQRNMVIVCTAEILNQCLL 245
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
SY K++ I +LI DE HHA+ H YA I+ + Y + S PR+FGMTASPI +K
Sbjct: 246 NSYVKMDQINLLIFDEAHHAKKDHPYARIIRDSY---FKAQPSQRPRVFGMTASPIDTK- 301
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLAD 255
D + LETL++S++ T + ++L + K Y E P A
Sbjct: 302 ----GDITEAATRLETLLDSRIATTSKITLLREVVSRPIEKVWAYNRLESPFAT------ 351
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL------KAAE 309
+ +L TR N+ + E S++ +C S+ W AL K
Sbjct: 352 --ELYKLMDTR-YGNIKVLEGVYRFAWHASSELGK---WC-SDRAWWHALADDVLPKLEG 404
Query: 310 TIS-CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLL 368
IS ES+ E F + I + +AS+ + Y + E G L
Sbjct: 405 NISKLVESNTLNAEHGAVFKDIIRIR---EASETVKNYSFADPELP-----------GEL 450
Query: 369 TEKIVCL-IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT--KYIAGN 425
+ K+ L +E + +CI+F ++ TA +L L + L H G+
Sbjct: 451 SPKVQLLRMELSKHFSDTTGTKCIVFTQKRYTAKILNELFTVLNIPHLRPGVLIGVRPGD 510
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
G+ R++ +V+ FR G +N + ATS+ EEGLD+ CNLV+ FD RT+ ++QS
Sbjct: 511 IGGMNVTFRQQFLALVK-FRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQYVQS 569
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--------EVLSHASLPCSPLN 537
RGRAR S Y +MV+ ++ + RL+ + M++ +L L
Sbjct: 570 RGRARHCTSTYAIMVEKDNAEHEGRLKEIREAEKIMQRFCETLPEDRILHGNDHDLDSLL 629
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGICTL 594
G + V+STG T S+++++ Y S L + P + H++ +C +
Sbjct: 630 QEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVGHVSNAY-VCEV 688
Query: 595 YLPNNCPIQTVIAQGNIK--TLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGN 652
LP PI+ + I+ KQ+A + C L + L D+ I + A +
Sbjct: 689 ILPEKSPIRGLTGSPAIRKAVAKQSAAFDTCLLLRK-HRLLDDYFNSIYHRRLPAMRNAK 747
Query: 653 EPYNA----EHPIYFPPELVNQ---SPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT 705
E+ + P + + +P D H L+ K R I+L R
Sbjct: 748 LAITCKRTNEYDMLLKPSIWAKQRTTPIDKLYGIHISLLPSKP---LSRDHRPILLLTRE 804
Query: 706 EL-ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI--TLFRVIMDHNLD 762
+L E + D +VE L+ LKH +I + Q L +I +F + +H +
Sbjct: 805 KLPEFPAFSIYLDEDVETKVLSYPLKHGLQISVDELQSLTTFTLRIFRDIFHKVYEHEVQ 864
Query: 763 KLNEILDGFELRDNLEIDYLLLPSTG-QLIDWKTVATVLFPRDNGS---KHNMNCSTMFN 818
K+ L + D P +G DW TV F +N ++N ++ N
Sbjct: 865 KMPYWLAPAKALDG--------PGSGTNPRDWTDWDTVSFVHNNDEIPFTRDLNPDSLVN 916
Query: 819 ARIVHTKSGPL--CTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKH 876
I G T + ++L + + ++ +L N +
Sbjct: 917 RFIFDNWDGRFRYFTVAVADTLQPSDPPPPSVPRRRHMNNIMNYTLSLSKNSRARFFSG- 975
Query: 877 YEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPIS 936
C +P+L + +N L K Q +KE F + E RI P S
Sbjct: 976 ---------CDWNQPVLQAELVRLRRNLLDKMTTQ-EKEMQTECF-ICAEPLRISAIPTS 1024
Query: 937 L-STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
+ ST +F P+I+ RL S L+A+ + L + I LEA T + H
Sbjct: 1025 IVSTCLAF---PAIISRLDSYLIALEACDEL------ELVIRPDFALEAFTKDSDNTEEH 1075
Query: 996 --------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
E LE LGD FLK A S L+ ++ E V + +I N L
Sbjct: 1076 RGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKNLF 1135
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR----KIYVTGRKKVKSK 1097
++++ +IR+ F +W G +L +G+ K+ G+ + K
Sbjct: 1136 NTAIKKQIYRYIRSRGFSRHIWYPDGL----------TLLHGKDHSKKLLSEGKHALGEK 1185
Query: 1098 TVADVVEALIGAFLSTGG-EN-------VGLIFLD----RIGIKVDFVNVPYQRQFQVHA 1145
T+ADV EALIGA L +GG EN +D R+ +++ + ++Q
Sbjct: 1186 TIADVCEALIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYITLYTMPKYQTEK 1245
Query: 1146 ERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGDAV 1196
R RH+E L Y F P LL A+TH S Y +P CYQRLEFLGD++
Sbjct: 1246 PRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVP----CYQRLEFLGDSL 1301
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LD + L+ ++P P +LT+ + A V+N SVK G H+ I+ S+ L +I
Sbjct: 1302 LDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITH 1361
Query: 1257 TVDSFEKL---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV--VF--QSIR 1309
V+ E S G+ W PK L D++E+ GAIFVDS + +V VF + I+
Sbjct: 1362 YVEEIESAQAESRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIEVFFERQIK 1421
Query: 1310 PLLEPM 1315
P E M
Sbjct: 1422 PFFEDM 1427
>gi|302755618|ref|XP_002961233.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
gi|300172172|gb|EFJ38772.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
Length = 1291
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 290/915 (31%), Positives = 434/915 (47%), Gaps = 138/915 (15%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVLVP 82
+YQLE LE LK+NTIVFLETG+GKT IA ML A L P + VFL P V L
Sbjct: 1 SYQLEVLEKVLKENTIVFLETGAGKTHIAAMLFNKLADRLSMPEEKRIGVFLTPTVALAD 60
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA I T LKVG Y G +D WD W EE+ H+VLVMT Q+L + L+LS ++
Sbjct: 61 QQANVISSSTRLKVGIYHGGQ-MDTWDVRKWSEEIDSHQVLVMTAQVLFNSLQLSAIRME 119
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
MI+VLI DECH A+ H YA +M
Sbjct: 120 MIEVLIFDECHRAQNNHPYASVM------------------------------------- 142
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL------YTHLADE 256
K+YT S + L +P T ++ YD+ H T L D+
Sbjct: 143 -------------KIYTITSRAELEEKVP--TPFYRNLYYDKAHHCFKELRRCLTDLLDK 187
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW----------LALK 306
+ +I LD N+ R K S + + + CL +LG+W LA+
Sbjct: 188 VNVIVY--------LDENKK-----RSKFSNLYNAITSCLLDLGLWSAVLVKKLHFLAVL 234
Query: 307 AAETISCYESDFF--AWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIG--DDSKFN 362
A E + + + + E D E ++F +A L ++VP + SI +D+K
Sbjct: 235 AVEVLLKIDPEGTKPSVENEDKNDE---QRFLKEAYNILKSFVPGDSVSSISSPEDAKKA 291
Query: 363 LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-RHCTWKTKY 421
++SGL+T K+ L++ L+ YR VE RC+IFVERV+ VL LLS C +T Y
Sbjct: 292 VNSGLITSKVKALLKILVRYRNVEPFRCMIFVERVVVTQVLARLLSTFKAIDFC--RTGY 349
Query: 422 IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
I G + + K E V+ F+ G +NV++ TS+ EEGLDVQSCN V+ FD RT+ S
Sbjct: 350 IVGVTAD---GNTTKHVETVKAFKSGELNVLICTSVAEEGLDVQSCNCVVRFDICRTLRS 406
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS--LPCSPLNNH 539
FIQSRGR R +++ Y+ +++ G+ +S L + S MR E LS S + +PL +
Sbjct: 407 FIQSRGRGRKRDATYMFLLERGNLEQESLLMELVNSEELMRAEALSRMSKTIEITPLIDA 466
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICT 593
DF++ S I+T +VS IY YCS+LP D ++ P P+ + N+E+ CT
Sbjct: 467 DL--DFFYTTSGACIST-DGAVSFIYRYCSQLPGDRFYNPKPEIEVTKCESDNEELFSCT 523
Query: 594 LYLPNNCPIQ--TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRG 651
+ P N P+ T + + N + K+ ACLEAC++L +GAL + P++ EK ++ G
Sbjct: 524 ITFPPNAPLHVLTGLPKRNKQLAKKVACLEACRQLDALGALGERHPPEVREEKMASEGPG 583
Query: 652 ------NEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT 705
E + + + + + S T I H Y + N + N L
Sbjct: 584 LGSTKLKELFPSIKSTTYQRQWITTS---TDIVLHIYALIFHPEENGS-TYTNFGLLFDA 639
Query: 706 ELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLF-----RVIM-- 757
L+ ++ + +L + + R + L G+ ++ Q+ + +Q +F R++
Sbjct: 640 ALDDDVGNIEVNLYLTKNRAVKAKLSSAGQRRVDSVQLAAAKAYQEIMFNGAFSRLVFRE 699
Query: 758 DHNLDKLNE-ILDGFELRDNLEID-YLLLP--STGQLIDWKTV-----ATVLFPRDNGSK 808
D N L +L E + L + YLLLP IDW V A L P
Sbjct: 700 DKNDRTLATCLLSSTEKANELWSETYLLLPILDGSCDIDWNIVTRCADAAKLLPSLCSEL 759
Query: 809 HNMN-CSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNN 867
+ C + +++T SGP+ + +++V T H G+++ I VL L A S F N
Sbjct: 760 NKTEVCMERPDTGLIYTASGPVSPGALQDAVVLTVHTGKLFSIVEVLEDLGAQSTFKENE 819
Query: 868 GS-VTTYKKHYEERY 881
S TY++ Y +Y
Sbjct: 820 ESEPCTYEEFYLRKY 834
Score = 273 bits (698), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 252/441 (57%), Gaps = 38/441 (8%)
Query: 980 KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
++LEA T+ +CQ+ F E LE LGDS LKYA +++L+ + HEG LS ++ I N+
Sbjct: 850 QILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNST 909
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIPG-------------DNSGSYELND----DSLFN 1082
L KL Q LP ++R E F P W+ G DN + E + D+ +
Sbjct: 910 LRKLAVAQDLPMYVRDEPFYPSCWVGAGMYRQRSRKCCCRLDNLVTKESSKPRPTDATYY 969
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN-------- 1134
K G + + SKT +D +EALIGA+ GG + L F+ + + VDF +
Sbjct: 970 VGKTCGQGHRWMCSKTTSDALEALIGAYAVGGGFDGALEFMKALQVDVDFDSGLIAASQH 1029
Query: 1135 --VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
VP Q H L++ LE L Y+F++ +LL+EA+TH S P+ CYQRLEF+
Sbjct: 1030 RPVPLD-AVQFHMPALLS---LEKELCYTFQNKALLLEAITHAS--TPDTVFCYQRLEFI 1083
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDAVLD+L+T +L+ +PGLSPG L+D+RSASVNNDC A +VKH LH ++ H S EL
Sbjct: 1084 GDAVLDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAELRA 1143
Query: 1253 RINITVDSFEKLSLGST-FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
+I +D ++ S FG+++++ PKAL DI+ES+AGAI VDSG + E ++ ++ L
Sbjct: 1144 KITSFLDVLDRDPECSVMFGFKALSG-PKALADIVESVAGAILVDSGFDFEKLWVVLKRL 1202
Query: 1312 LEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLD 1371
L P +TP T+ FHPVRE E C + + +S SG A + ++A + F
Sbjct: 1203 LSPFVTPATLSFHPVREFHELCSYKSWEFEWVQSS--SG-ATAEILLKAGEQRFTEVSSI 1259
Query: 1372 ADKKTAKKVACKEVLKSLRAS 1392
+KK A+K +++L L+ +
Sbjct: 1260 KNKKDARKDVAEKLLTMLKVN 1280
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 286/894 (31%), Positives = 425/894 (47%), Gaps = 166/894 (18%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A +NTI FLETG+GKTLIAI+L++S + L+ + ++VFLVPKV L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 81 VPQ-------QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM--------------SK 119
V Q QAE I+ T +VG Y G+MG DFWD W+ E S
Sbjct: 309 VYQVPPNKKHQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQFLKLTSFFLFSS 368
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN 179
+VLVMT QILL+ LR S ++ I +LILDECHHA KH Y+ +M+EFYH T
Sbjct: 369 TQVLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYH---TTPKDK 425
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPF------- 232
P IFGMTASP+ K SS+ D KI +LET ++S V T L +P
Sbjct: 426 RPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVE 485
Query: 233 -----------STAKFKFYKYDEIPHA-------LYTHLADELAMIELKHTRSLENLDLN 274
T K +E A + D A EL+ + +
Sbjct: 486 YDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTES 545
Query: 275 EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETII 332
+ A LI K+ IN Y L+ELG W A K ++ +S +SD Q+D F E+ +
Sbjct: 546 DGAANLIH-KLRAIN----YTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYL 600
Query: 333 KKFGS-------DASQALVTYVPSGA-----------EWSIGDDSKFN------------ 362
+ S + + A G E + DD +
Sbjct: 601 SEVVSLLQCELLEGAAAEKVAAEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAA 660
Query: 363 LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL---LPRHCTWKT 419
+ G +T K+ LI+ LL+Y+ D R I+FVERV+ A+VL + ++ LP +
Sbjct: 661 VADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVRIKVFAELPSLSFIRC 720
Query: 420 KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
+ G+N+ + +S + Q+ I +FR G V ++VATS+ EEGLD++ CN+V+ FD ++TV
Sbjct: 721 ASMIGHNNSQEMKSSQMQDTI-SKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTV 779
Query: 480 CSFIQSRGRARMQNSDYLLMVK------------------------------SGDSTTQS 509
++IQSRGRAR SDY+LMV+ G+ + +
Sbjct: 780 LAYIQSRGRARKPGSDYILMVERYIKSFKNYILIFVTTGHQISTDMSTCVTCRGNVSHAA 839
Query: 510 RLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLSSSVSLI 564
L N S +RKE + L + + D Y VE+TG + +L+S+V L+
Sbjct: 840 FLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLV 899
Query: 565 YFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIAQGNIKTLKQA 617
+FYCS+LP D Y P+F + K C L LP N P + I +G + + +
Sbjct: 900 HFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE--ILEGPVCSSMRL 957
Query: 618 A-----CLEACKKLHQIGALTDNLLPDIV----VEKHDAQKRGNE-PYNAEHPIYFPP-- 665
A + ACKKLH++GA TD LLPD EK D G P A H ++P
Sbjct: 958 AQQVDIIVSACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGV 1017
Query: 666 ------ELVNQSPQ--DTKITYHCYLIEL--------KQHFNYDISARNIVLAMRTELES 709
E V+ + ++ +H Y+ + K F ++S I+ EL++
Sbjct: 1018 ADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFG--NELDA 1075
Query: 710 EIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
E+ ++ DL V R +T +L G + + NQ+ ++F + L +++D +++
Sbjct: 1076 EVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVE 1129
Score = 300 bits (768), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 213/631 (33%), Positives = 317/631 (50%), Gaps = 124/631 (19%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEE------------- 879
+V H+G+ + + + ++A + F R G + TY +Y++
Sbjct: 1271 IVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKIYVVQDRLFFYF 1330
Query: 880 -------------------RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKIS 920
RYG+ L ++PL+ GR + + +N LS +Q + + +
Sbjct: 1331 LHNLRLLRLYKSSSIMLFIRYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLD 1390
Query: 921 FE----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 976
LPPELC ++ P+S S +PSIM R++S+LLAV LKN++ + I
Sbjct: 1391 KTYYVFLPPELC--VVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPI 1442
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
PT K+LEA+T CQE F E E LGD++LK+ S+ LF Y HEG L+ +++++S
Sbjct: 1443 PTSKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1502
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPG----------DNSGSY---------ELND 1077
N L + + L +I+ + F P W PG D S+ E N
Sbjct: 1503 NMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENS 1562
Query: 1078 DSLFNGR------KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 1131
D +G + ++ + + SKT+ADVVEALIG + GG+ + IGI V+
Sbjct: 1563 DVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVE 1622
Query: 1132 -----------FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 1180
VNVP + ++ LE L Y F++ LLVEA+TH S
Sbjct: 1623 DDPDEVDGTLKNVNVPES------VLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSS 1676
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH 1240
+ CYQRLEF+GDAVLD+LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH
Sbjct: 1677 GVS-CYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLH 1735
Query: 1241 KHILHASHELYKRIN-------ITVDSFEKLSLGSTFGWE---------------SVTSF 1278
++ H S L K++N + SF+ L++ F ++ SF
Sbjct: 1736 LYLRHGSSALEKQVNKIKKQSILFSKSFKCLTVWLLFVFQIREFVKEVQTESSKPGFNSF 1795
Query: 1279 -------PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTE 1331
PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+TPET+ HPVREL E
Sbjct: 1796 GLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQE 1855
Query: 1332 YCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
CQ+ ++ ASR SG A TVEV +G
Sbjct: 1856 RCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 1883
>gi|340372191|ref|XP_003384628.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1530
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 389/1537 (25%), Positives = 635/1537 (41%), Gaps = 304/1537 (19%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL----LRKPSPFVAVFLVPK 77
R YQ + +E A+K+NTIV L TG+GKT +A+ML+R A+ + +FL
Sbjct: 19 GRPYQDKMVEYAIKENTIVSLGTGAGKTFVAVMLIREMAHFAEGQFTESEGQRIIFLAHT 78
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDM--GVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
V LV QQAE I+ +T LKV ++ GD +D W TW + VLV + I LD L
Sbjct: 79 VPLVKQQAEYIRDNTSLKVFEFVGDPKGNIDSWPKETWYNHFNAANVLVFSRTIFLDLLM 138
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
+ K + +++ DECHHA + IM + + PRI G++AS + KV
Sbjct: 139 KGFIKPRQLCLIVFDECHHATKNDPFVQIM----KVVKDAPPEERPRILGLSASLLGQKV 194
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK---------YDEIP 246
D + + +LE + S T + F K Y+ EI
Sbjct: 195 KPG--DLKKGVKNLEATLMSTARTAPDMEEVLKFATNPDEKIASYESALDEPASLLKEII 252
Query: 247 HALYTHLADELAMIELKHTRSLENL--DLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
H L ++ + K + +NL DL+ +L + S ++ L + A
Sbjct: 253 HPPLVFLQTKIQERKGKLEETAKNLLDDLHHILIDLGPASAAGFVSVAIFELRK-----A 307
Query: 305 LKAAETISCYESD--FFAWEQLDGFGETIIK---KFG----SDASQALV----TYVPSGA 351
++ +TI +E + A E+L F + + K+G S+ + L+ V +
Sbjct: 308 IEYTDTIDEWEKHIAWLALEKLYIFEASCRQFKTKYGILQDSNKVKTLLDEIRDTVSANG 367
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCI---IFVERVITAIVLQSLLS 408
E S SK + E+ ++ + + R + IF ER TA+ L L+
Sbjct: 368 EMSDSPPSKGTKEEAKGEEEKEEEVQKKDQKSSPQAKRALRGIIFAERRHTALCLSKLIQ 427
Query: 409 ELLPRHCTWK---TKYIAGNNSGIQCQSRKK--------QNEIVEEFRRGLVNVIVATSI 457
E K ++ G++ G + +K Q +++ +FR+G VN++VATS+
Sbjct: 428 EKKKTQPDLKHVSCDFVVGHSLGQSGNAMRKEARMKSSRQEQVLGKFRKGTVNLLVATSV 487
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLAS 517
+EEG+DV CNLVI FD + S++QS+GRAR + S ++L++ + + Y
Sbjct: 488 IEEGVDVPRCNLVIRFDLPQNFRSYVQSKGRARDKPSKFVLLLSDMEKNKLGEIRCYHQL 547
Query: 518 GNKMRKEVLSHASLPCSPLNNHMYGE---DFYHVESTGTIATLSSSVSLIYFYCSRLPSD 574
++ + S +LP + + + G +L +S++L++ YC RLP D
Sbjct: 548 ETELIELCQSDRALPSEEEIQKKMADIIPPYMPNGTEGARVSLGNSLTLLHRYCGRLPQD 607
Query: 575 GYFKPTPKFHINK--EMG----------------------ICTLYLPNNCPIQTVIAQ-- 608
Y K +P F + K + G IC+L+LP NCP+++ I +
Sbjct: 608 EYTKLSPHFEVKKIPKAGGRTLSLSELSLEEEDEDPNHNYICSLFLPINCPLRSDIIKSP 667
Query: 609 --GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHD---AQKRGNEPYNAEHPIYF 663
G + ++AA L A +KLH++ + D + D +++ E A
Sbjct: 668 PLGTKQQSQRAAALYAMEKLHKMDEVDDLFKAKASADSDDEDVKEEKKGEKTGAGSDKKS 727
Query: 664 PPELVNQSPQDT--------KITYHCYLIELKQHFNYDISARNIVLAMRTELE------- 708
SP T Y Y +K+ + ++ +AM T+ +
Sbjct: 728 SSYKKEVSPLLTGCFESSVNATGYFAYAFVIKEETRGLLYSKTQGVAMLTKKQLPYWMIP 787
Query: 709 --SEIKKVNFDLEVERGRLTVNLKHLGRIQLIPN----QVLLCRRFQITLFRVIMDHNLD 762
S K N + E+ +LTV LK + Q IP+ ++ + R F +F I+
Sbjct: 788 AYSLYVKDNSETEI---KLTVTLKPV--TQHIPSLTDEELNIYRSFHHNVFTDIL----- 837
Query: 763 KLNEILDGFELRDNLEI-------DYLLLPSTGQLIDWKTVATVLFPRDNGSKHNMNCST 815
F DNLE DY+++P T +D KTV + H + +
Sbjct: 838 --------FITPDNLEANFDKAIKDYIIVPVTINSLDGKTVDDIKL----DFAHAKSIVS 885
Query: 816 MFNARIVHTKSGPLCTCKIHNSLVCTPHNGQ----IYCITGVLGHLNANSLFTRNNGSVT 871
+ A S P +++ LV + + I V + L N
Sbjct: 886 YYEAGEKRKPSKPYTPSSLNSCLVTPAYRDSTIPGLQEIFWVEMDESKTPLSPFNYPKFA 945
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRI------FHVQNYLSKCRQQKQKEPS--KISFEL 923
+ + ++ +Y ++ +P L RR+ YL EP+ K +
Sbjct: 946 NFVEFFKSKYDYEIIDKDQPALICRRVNTSFLKLFTSRYL-------MSEPAVKKTDITM 998
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKN----------------MLL 967
PEL + P+S+S + +P+++ R++SLL+A L +L
Sbjct: 999 FPELVHVF--PVSVSFWRVLRCLPAMLWRVESLLIAHKLSTRIRMETGIGRENSDTFLLT 1056
Query: 968 DHCMQ------------------NVTIPTIK-------------------VLEAITTKKC 990
D ++ N P I +L+A+T +
Sbjct: 1057 DTSVRGYADSGHGVLPSRRLQYLNDLTPDITKVPSDEEIRYSNRGPDNCLILQALTPRGA 1116
Query: 991 QEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLP 1050
+ +LE LE LGDSFLK S L+ N+HEG LS + R ++N L LG ++ +
Sbjct: 1117 NDSINLERLELLGDSFLKLVTSVYLYNLRPNSHEGKLSEARSRRVANINLFVLGKKKGIT 1176
Query: 1051 GFIRTESF--------DPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
I ++ F + W+ PG Y ++S KV K+VAD
Sbjct: 1177 SAILSDDFVSGIDSFKERLTWVPPG-----YAALEES------------HKVTDKSVADT 1219
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKVD------------------------------- 1131
VEALIGA GG G+ + GIK++
Sbjct: 1220 VEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTRSLLLAESDSIFSSH 1279
Query: 1132 FVNVPY------QRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
F + P + L V ++ + YSF++ LL+EA+TH SY +I C
Sbjct: 1280 FGSPPAPKLAFSDKAISTRNRILPQVSSIQGKIEYSFKNELLLIEAMTHSSYHRNDITGC 1339
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGDA+LDYL+T ++Y PG +T++RSA V N +A ++ LHK + H
Sbjct: 1340 YQRLEFLGDAILDYLVTCHIYQSDSSAEPGEITELRSALVCNSRFAKLAISLNLHKSLCH 1399
Query: 1246 ASHELYK---------RINITVDSFEKLSLGSTFGWESVTSF------------------ 1278
S L+ R D FE++S+ +++
Sbjct: 1400 GSPNLFNDMKKYAQSLRQREKEDMFEEMSINDNDSAQAIVESIKDGDFDDDDDDDDDDDI 1459
Query: 1279 --PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
PK+L D E+LAGA+F+DSG N + V+++ P LE
Sbjct: 1460 EPPKSLSDCFEALAGAVFIDSGMNLQTVWEAFSPFLE 1496
>gi|41469332|gb|AAS07188.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 416
Score = 348 bits (892), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/382 (48%), Positives = 253/382 (66%), Gaps = 5/382 (1%)
Query: 385 VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEF 444
++D+RCI+FVERVIT+IVL+ LLS + + W K++AG+ G+ QSRK EIVE F
Sbjct: 2 MQDLRCIVFVERVITSIVLEHLLSSI-HQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESF 60
Query: 445 RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
R+G V++I+AT ILEEGLDV SCNLVI FDPS TVCSFIQSRGRARM+NSDYLL+V GD
Sbjct: 61 RKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGD 120
Query: 505 STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLI 564
Q+ E +LASG MR+E L S+ C PL N + + +Y VEST I TL+SSV LI
Sbjct: 121 VEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLI 180
Query: 565 YFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACK 624
+F+CS+LPSD YF P P+F I+K G CTL+LP + P+QTV +G LK+ CL+AC+
Sbjct: 181 HFFCSKLPSDEYFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQ 240
Query: 625 KLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKI-TYHCYL 683
+LH IGALTD+LLP++ V D + E P YFP E V+ +++ Y+CY
Sbjct: 241 ELHAIGALTDSLLPELDV-PCDEEPDIVVENKIEQPSYFPEEFVDNWRSFSRLGIYYCYK 299
Query: 684 IELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVL 743
I L + S +I+LA++ +L S+ +F L + +V +K++G I L QV+
Sbjct: 300 ISL-EGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVI 358
Query: 744 LCRRFQITLFR-VIMDHNLDKL 764
+ RRFQ T+ +I D +L+ L
Sbjct: 359 IARRFQTTILSFLIGDDHLEIL 380
>gi|242763899|ref|XP_002340666.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218723862|gb|EED23279.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1494
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 386/1439 (26%), Positives = 627/1439 (43%), Gaps = 227/1439 (15%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY--LL---R 64
TT++ +A T+ R+YQ+E E A +NTI L TGSGKTLIAI+LL+ L+ R
Sbjct: 70 TTQDFAA-TIEDPRDYQIELYERAKHENTIAVLATGSGKTLIAILLLKHIIQNELIDRGR 128
Query: 65 KPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLV 124
++ FLV V LV QQ +K + D V +GDMG+D W+ W + + V+V
Sbjct: 129 GQRHRISFFLVDSVTLVFQQTAVLKNNLDQPVASIYGDMGLDLWNKDVWTGYFTTNMVIV 188
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIF 184
T IL L SY + I +LI DE HHA+ +H YA IM + Y L+ ++ PRIF
Sbjct: 189 CTADILTQCLLHSYITMEDINLLIFDEAHHAKKEHAYARIMKDGY---LKANPASRPRIF 245
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE 244
GMTASP+ +K +D + H+LE+L++SK+ T ++ ++L + + + +KY
Sbjct: 246 GMTASPLDAK-----RDPVKAAHELESLLHSKIATASNLNILRQVV--GRPEEEQWKYAA 298
Query: 245 IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
+ T L ++LEN E ++ I + L S LG W A
Sbjct: 299 LKKPFKTAL-----------YQTLEN---QYGDMECLK----SIFAFSLQASSYLGPWCA 340
Query: 305 LKAAETISCYESDFFAWEQLDGFGETIIKKF-GSDASQALVTYVPSGAEWSIGDDSK--- 360
+ W D E ++ +F G S V + A+ + + S+
Sbjct: 341 DR-------------VWA--DALSEKLLPRFHGKITSACKRLGVETSAQKAESEISRLKQ 385
Query: 361 -------FNLDSGL-----LTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLL 407
+ SGL L++K+ L L + + +CI+F ++ TA +L+++
Sbjct: 386 MSEMIANYERPSGLDILEQLSDKVQVLYRHLARRFEEAPNTKCIVFTKQRNTAKLLEAVF 445
Query: 408 SEL-LPRHCTWKTKYI-AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
EL +P I G+ SG+ + +Q + EFR+G +N I ATS+ EEGLD+
Sbjct: 446 RELSVPNMRPGVLVGIRPGDISGMN-STYHQQFKATIEFRKGELNCIFATSVAEEGLDIP 504
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK-- 523
CNLV+ FD T+ +IQSRGRAR NS Y MV+ + ++RL+ + MR+
Sbjct: 505 DCNLVVRFDLYDTLIQYIQSRGRARSLNSIYAHMVEIDNMEHETRLDEVHQAEEVMRRFC 564
Query: 524 ------EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
+L S + + + Y +ESTG T S+++++ Y S L ++ +
Sbjct: 565 EALPEDRLLGDKSDSLNAILERDSRKRQYKIESTGATLTYHSAMTVLARYASSLINEAHS 624
Query: 578 KPTPKFHINKEMGI--CTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALT 633
P + + G+ C + LP PI+ +I + + KQ+A E C L + G L
Sbjct: 625 SLHPCYVTTQTKGLYECEVILPEASPIRGLIGKPEPRKSLAKQSAAFETCILLRRHGLLN 684
Query: 634 DNLLPDI---VVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHF 690
D+ + + +A+ +++ + P + + +I
Sbjct: 685 DHFVSTYQRRLPAMRNAKLSITSKKTSQYSMIVKPAFWKKGCDHVPCELYLTVIMFSPAE 744
Query: 691 NYDISARNIVLAMRTELESEIK-KVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQ 749
RN+VL R L + + D +VE T+++ + L +++ L F
Sbjct: 745 PLQKERRNLVLLTRERLPQFPEFPIYLDDDVETTIRTISM--YKALSLSASELELLTTFT 802
Query: 750 ITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST------------GQLIDWKTVA 797
+ +F+ D N++ +E+ + Y L+P+ ++IDW T+
Sbjct: 803 LRIFQ-------DLYNKV---YEMNQE-AMPYWLVPTASGIGEYGEDANPSEVIDWDTLQ 851
Query: 798 TVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQI-YCITGVLGH 856
V M N R+ + P V NG+ Y +TGV
Sbjct: 852 FV----------------MDNERLDRNSASPE---DFVGRFVYDTWNGKYRYFLTGV--- 889
Query: 857 LNANSLFTRNN--GSVTTYKKHYEE--RYGIQL-----------CFDREPLLNGRRIFHV 901
N+ F ++ S ++++ E YG+ L C +P+ + I
Sbjct: 890 ---NTSFHPSDPPPSFVPHRRYMENIMEYGLSLYKNSRVRFLAECDWNQPVYDAELIPLR 946
Query: 902 QNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVN 961
+N L K ++ ++ L ++ I A ++ S P+++ R S L+A
Sbjct: 947 RNLLDKMSDAEKDVEKRVVVCLETQVISAIPAMVATSCLA----FPAVITRFDSYLVARE 1002
Query: 962 LKNML-----LDHCMQNVTIPTIKV----LEAITTKKCQEDFHLESLETLGDSFLKYAAS 1012
+ L L++ ++ VT + LE I ++ + E LE LGD FLK A S
Sbjct: 1003 CTDTLGLKVQLEYALEAVTKDSDNTGEHRLEQIHFQRGMGK-NYERLEFLGDCFLKMATS 1061
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
LF N+ E V + +I N L ++K+ IR++ F + W G
Sbjct: 1062 ISLFVESPNDQEYDFHVNRMTLICNRNLFNTAIQRKIYEHIRSKGFSRRNWYPDGMKLLR 1121
Query: 1073 YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 1132
+ N+D + KT+ADV EALIGA L +GG ++R + V
Sbjct: 1122 GKANEDQGLT---------HALGEKTIADVCEALIGASLLSGGP------VNRFDMAVKA 1166
Query: 1133 VNV----------------------PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVE 1170
V PYQ + E+ + R +E L Y F+ P LL
Sbjct: 1167 VTALVNSDHHNVDNWAEYSSRYSLPPYQIKEADGFEKDL-ARQVEMKLGYCFQYPKLLRS 1225
Query: 1171 ALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
A TH SY +P CYQRLEFLGD++LD + LY ++P P +LT+ + A V+N
Sbjct: 1226 AFTHPSYPSAWSTVP-CYQRLEFLGDSLLDMVCVEDLYERFPDRDPQWLTEHKMAMVSNK 1284
Query: 1229 CYALSSVKHGLHKHILHASHELYKRI-------NITVDSFEKLSLGSTFGWESVTSFPKA 1281
+V+ LH H+ + S+ L +I + DS + + W PK
Sbjct: 1285 FLGSLAVRLSLHTHLQYFSNPLQAQIARAVQDSQLAYDSHQTVDF-----WLHTDDPPKC 1339
Query: 1282 LGDIIESLAGAIFVDSGCNREVV----FQSIRPLLEPMITPETM-RFHPV----RELTE 1331
L D++E+ GAIFVDSG + V+ + I+P E M +T HP R+LT+
Sbjct: 1340 LSDMVEAYLGAIFVDSGFDFGVIESFYAKHIKPYFEDMALYDTFANKHPTTFLHRKLTD 1398
>gi|440632076|gb|ELR01995.1| hypothetical protein GMDG_05164 [Geomyces destructans 20631-21]
Length = 1634
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 375/1400 (26%), Positives = 601/1400 (42%), Gaps = 213/1400 (15%)
Query: 15 SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS---PF 69
S + + R YQ+E E A QNTI L+TGSGKTLIA +LLR L R+ +
Sbjct: 167 SQEIISSPREYQIELFEKAKTQNTIAVLDTGSGKTLIAALLLRHVIDEELERRENGGDKR 226
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
+A FLV V LV QQ +K + + K+ ++ GDMG D W W++ +++ V+V T ++
Sbjct: 227 IAFFLVDSVALVFQQYAVLKCNLNHKMEQFCGDMGCDLWSKELWEKHFNENMVIVCTAEV 286
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L L S+ + I +LI DE HHA+ H YA I+ +FY E S +PRIFGMTAS
Sbjct: 287 LFQCLHHSFITMKQINLLIFDEAHHAKRNHAYARIIKDFYAS--EPDQSLVPRIFGMTAS 344
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK--FYKYDEIPH 247
P+ ++ + + +LE L++S++ T + S+L ++ K K Y+ +P
Sbjct: 345 PVDARTNIK-----RGAAELEALLHSQIATASDASLLQ----YTNKKTKEEVAYYNALPP 395
Query: 248 ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK- 306
+ + L ++ N+ + K+ SK + S+LG W+A +
Sbjct: 396 STESQLFKKV----------------NQLVGGI--KECSKPLEYAVTASSDLGSWIADRV 437
Query: 307 -----AAETI----SCYESDFFAWEQLDGFG----ETIIKKFGSDASQALVTYVPSGAEW 353
E + + ES+F Q+D E +K S A Q ++ +V + +
Sbjct: 438 LLISFTGEDVKRLEAKIESNFHKQAQIDPIPLSNLENRKEKLQS-AQQIIMAHVFASPQ- 495
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLS--EL 410
L L+ K++ L L E + +CI+FV++ TA +L L + ++
Sbjct: 496 ---------LSRSQLSSKVLALASKLRERFERTTFDKCIVFVKQRYTAKLLADLFARPQI 546
Query: 411 LPRHCTWKTKYIAGNNSGIQCQ-SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
H + N +G + S + Q + FR+G +N + ATS+ EEGLD+ CNL
Sbjct: 547 GTPHLRVGSLTGTRNRNGADLEASFRNQVITLRRFRQGEINCLFATSVAEEGLDIPDCNL 606
Query: 470 VIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH- 528
VI FD TV +IQSRGRAR NS Y ++ G S++E+ L + + +L
Sbjct: 607 VIRFDLYSTVIQYIQSRGRARQDNSVYFHFIERG-----SKVEDALVREVRRNENILKEF 661
Query: 529 -ASLPCSP-LNNHMYGEDF-----------YHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+LP L+ + Y D+ Y STG T S+S++ + + LP
Sbjct: 662 CQALPEDRLLSGNNYNMDYFLAKERNIMRTYTEPSTGAKLTYRMSLSVLANFVASLPHSS 721
Query: 576 YFKPTPKFHINKEMG---ICTLYLPNNCPIQTVIAQ-GNIKTL-KQAACLEACKKLHQIG 630
P P++ + MG +C + LP N P+ I + N K + K +A EAC L +
Sbjct: 722 ESTPHPEYMMTA-MGVKYVCEVILPENSPVHGAIGRPANTKQVAKCSAAFEACLNLRKGK 780
Query: 631 ALTDNLLP---DIVVEKHDAQKRGNEPYNAEHPIYFPPEL--VNQSPQDTKITYHCYLIE 685
L + LL D +AQ N ++ + P + ++P + +T +I
Sbjct: 781 HLDEYLLSTFKDRGPAMRNAQLAITSKANTDYDMRTKPSMWATGETPSELFLT----IIS 836
Query: 686 LKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLK-HLGRIQLIPNQVLL 744
LK D ++ + R L S + F L G+ T + +G + + + L
Sbjct: 837 LKDPGQLDRPSQPLGFLTRGPLPSFPQ---FQLYFGSGKHTAAVSTAVGSLPVSSETLEL 893
Query: 745 CRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRD 804
F + +F+ I + D+ ++ Y ++P + D + P D
Sbjct: 894 INTFTLRIFKDIFSKEYES-----------DSAKMPYFIVP----IADTDAESQTRLPAD 938
Query: 805 NGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHL------- 857
S + + N + +S P + + P +G T + H
Sbjct: 939 LISWDILK-TVSDNQWLTWDESTP--ESFFEDKYILDPFDGSRKIWTRKVTHEYKPLDPV 995
Query: 858 ---NANSLFTRNNGSVTTYKKHYEERYGIQLCF-DREPLLNGRRIFHVQNYLSKCRQQKQ 913
A L +NN ++ Y + + F + +P++ G I +N+L
Sbjct: 996 PPNTATRLARKNNSNILEYSCSLFKVARSKRTFSETQPVIEGDVIPFRRNFLDDHDDPAN 1055
Query: 914 KEPSKISFELPPELCRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLL 967
P+K C ++ P+++S ++TF P+I+HR++S L+AV +ML
Sbjct: 1056 SGPTK---------CYVVPEPLTISALPTRIVAMAYTF-PAIIHRIESYLVAVEACSML- 1104
Query: 968 DHCMQNVTIPTIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQ 1013
++ I LE +T D H E LE LGD FLK A S
Sbjct: 1105 -----HLPISADLALECMTKDTRNTDEHGEEQVEFQRGMGNNYERLEFLGDCFLKMATSI 1159
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSY 1073
L+ + +++E VK+ +I N L + + KL FIR+++F+ + W G
Sbjct: 1160 SLYTLHPDSNEFDFHVKRMLMICNKNLMDVALQLKLYEFIRSQAFNRRAWYPEG------ 1213
Query: 1074 ELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV--- 1130
L G+ + K+ KT+ADV EALIGA L T + R ++
Sbjct: 1214 ----LVLKKGKAAQAPKKHKLGDKTIADVSEALIGAALLTPSNGHAMDHAVRAVTELVYS 1269
Query: 1131 -------------DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
+ YQ ++R V +E NY F P LL A TH SY
Sbjct: 1270 TDHAIEKWEDYFKGYTKPKYQIAASTASQRNV-AEQIEITHNYHFHYPRLLRSAFTHPSY 1328
Query: 1178 MLP--EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSV 1235
+P YQRLEFLGD++LD +L++++P P +LT+ + A V+N V
Sbjct: 1329 PFAYERVPN-YQRLEFLGDSLLDMACVNFLFHRFPTKDPQWLTEHKMAMVSNQFLGAVCV 1387
Query: 1236 KHGLHKHILHASHELYKRINITV------------DSFEKLSLGSTFG---WESVTSFPK 1280
G H +L + + I V D+ L S W PK
Sbjct: 1388 ALGFHTQLLQFNPIIQGSITEYVCEITEAREQAEQDAIRHGKLASECARDYWLHTKLPPK 1447
Query: 1281 ALGDIIESLAGAIFVDSGCN 1300
L DIIE+ GAIFVDS N
Sbjct: 1448 CLPDIIEAYIGAIFVDSSFN 1467
>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1497
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 378/1406 (26%), Positives = 627/1406 (44%), Gaps = 195/1406 (13%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--- 66
TT+E +A T+ R+YQ+E E A ++NTI L TGSGKTLIAI+LL+ +++R
Sbjct: 72 TTQEFAA-TIDDPRDYQIELYERAKEENTIAVLATGSGKTLIAILLLK---HIIRNELID 127
Query: 67 -----SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
++ FLV V LV QQ +K + D V +GDMG+D W+ W + +K+
Sbjct: 128 RERGQRHRISFFLVDSVTLVFQQTAVLKNNLDQAVASLFGDMGLDLWNEDVWMDYFTKNM 187
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
V+V T I++ L SY + I +LI DE HHA+ +H YA IM E Y L+ P
Sbjct: 188 VIVCTADIVVQCLLQSYITMEDINLLIFDEAHHAKKEHAYARIMREGY---LKAKPECRP 244
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
RIFGMTASP+ +K +D + +LE+L++SK+ T ++ ++L + + Y
Sbjct: 245 RIFGMTASPLDAK-----RDPVKAAQELESLLHSKIATASNLTLLRQVVGRPEEEQWRYP 299
Query: 242 YDEIPH--ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
+ P ALY L + +E +S+ EA + L +C
Sbjct: 300 ALKKPFKTALYQILEKQYGDMEC--LKSIFTFSF-EASSYLGP-----------WCADH- 344
Query: 300 GVWLALKAAETISCYESDFF-AWEQLDGFGETIIKKFGSDASQ-----ALVTY--VPSGA 351
VW + + + + AW++L G ET +KK ++ S+ L+T +PSG
Sbjct: 345 -VWSGAISEKMLPRFHGKITTAWKRLGG--ETAMKKTETEISRLRQMSELITNYGMPSGP 401
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSEL 410
+I + L+EK+ L + L + + + +CI+F ++ TA +L+ + +L
Sbjct: 402 --AILEQ---------LSEKVRVLYQHLTKRFEEAPNTKCIVFTKQRNTAKLLEVVFKQL 450
Query: 411 LPRHCTWKTKYIAGNNSGIQC---QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
H + + G SG C + +Q + EFR+G +N + ATS+ EEGLD+ C
Sbjct: 451 SVPHM--RPGVLVGIGSGDICGMNSTYPQQFKATIEFRKGELNCLFATSVAEEGLDIPDC 508
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK---- 523
NLV+ FD T+ ++QSRGRAR S Y M++ + +++L+ + MR+
Sbjct: 509 NLVVRFDLYETLIQYVQSRGRARRSESIYAHMIEIDNMEHETKLDEVHQTEELMRRFCEA 568
Query: 524 ----EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
+L + + S + + Y +ESTG T S++ ++ Y S L +
Sbjct: 569 LPEDRLLGNNNDALSAILEKDSRKRQYKIESTGATLTYHSAIMVLARYASSLQYENNETG 628
Query: 580 TPKFHIN---KEMGICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTD 634
+ ++ K M C + LP PI+ ++ + + KQ+A E C L G L +
Sbjct: 629 SHPHYVTTQIKGMYECEVILPKGSPIRGLMGKPEPRKSLAKQSAAFETCILLRNNGLLDN 688
Query: 635 NLLPDI---VVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN 691
N + + +A+ ++ + P Q+ + LI
Sbjct: 689 NFVSTYQRRLPAMRNAKLSITSKKTTQYSMIVKPSFWTQACDGVPCQLYLTLIMFSPAEP 748
Query: 692 YDISARNIVLAMRTEL-ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI 750
R++VL R L + + + +VE T+++ + + P+ + L F +
Sbjct: 749 LQNERRSMVLLTRKRLPQCPEFPIYLEEDVETTVRTISVSKA--LSISPDDLELMSNFTL 806
Query: 751 TLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQL------------IDWKTVAT 798
+F+ D N+I +E+ + + Y L+P+ + IDW +
Sbjct: 807 RIFQ-------DLYNKI---YEMNQEV-MPYWLIPTASDIGEYGEGINPSDAIDWDVLQ- 854
Query: 799 VLFPRDNGSKHNMNCSTM-FNARIVHTKSGPLCTCKIHNSLVCTPHNGQI-YCITGVLGH 856
F +D+ + S N R V+ P +G+ Y + G+
Sbjct: 855 --FVKDHERLDRNSVSPQGLNGRFVYD-----------------PWDGKYRYFLRGINTS 895
Query: 857 LNANSLFTRNNGSVTTYKKHYEE--RYGIQLC-FDREPLLN----GRRIFHVQ------N 903
L + L ++++ E YG+ L R P L G+ ++ + N
Sbjct: 896 LRPSDL----PPYFLPHRRYMENIMEYGLSLYKRSRIPFLAACDWGQDVYDAELIPLRRN 951
Query: 904 YLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
L + +++ ++ L ++ I A ++ S F P+I+ R+ S L+A
Sbjct: 952 LLDRLSNSEKQVERRMVLCLETQVISAIPATVAASCFA----FPAIITRIDSYLVAHECA 1007
Query: 964 NML-----LDHCMQNVTIPTIKV----LEAITTKKCQEDFHLESLETLGDSFLKYAASQQ 1014
++L L + ++ VT + LE I ++ + E LE LGD FLK A S
Sbjct: 1008 SLLGLEIQLGYALEAVTKDSDNTEEHRLEQIQFQRGMGK-NYERLEFLGDCFLKMATSIS 1066
Query: 1015 LFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYE 1074
LF N+ E L V + +I N L E+K+ +IR++ F + W G +
Sbjct: 1067 LFVGSPNDQEFDLHVNRMTLICNRNLFNTAKERKIYEYIRSKGFSRRNWYPEGMKLLRGK 1126
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE----NVGLIFLDRIGIKV 1130
N+D T + KT+ADV EALIGA L +GG ++ + + R+ +
Sbjct: 1127 ANEDKA-------STHTHGLGEKTIADVCEALIGASLLSGGPVNRFDMAVKAVTRL-VNS 1178
Query: 1131 DFVNVPYQRQFQVH--------------AERLVNVRHLESLLNYSFRDPSLLVEALTHGS 1176
D NV + H + L N ++ L Y F+ P LL A TH S
Sbjct: 1179 DLHNVESWAGYSSHYSLPSYQIKEANGFEKDLAN--QIDKKLGYRFKYPRLLRSAFTHPS 1236
Query: 1177 YMLP-EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSV 1235
Y I CYQRLEFLGD++LD + LY ++P P +LT+ + A V+N +V
Sbjct: 1237 YPTAWSIVPCYQRLEFLGDSLLDMVCIENLYERFPDRDPQWLTEHKMAMVSNKFLGSLAV 1296
Query: 1236 KHGLHKHILHASHELYKRINITVDSFEKL--SLGSTFGWESVTSFPKALGDIIESLAGAI 1293
+ LH H+ + S+ L RI V+ + S S W + PK L D++E+ GAI
Sbjct: 1297 RLDLHTHLQYFSNPLQGRIAQAVEDAQLAYESHQSVDFWIMIEDPPKCLSDMVEAYLGAI 1356
Query: 1294 FVDSGCNREVV----FQSIRPLLEPM 1315
FVDSG + V+ + I+P E M
Sbjct: 1357 FVDSGFDFGVIESFYAKHIKPYFEDM 1382
>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
CIRAD86]
Length = 1516
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 365/1391 (26%), Positives = 610/1391 (43%), Gaps = 212/1391 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R YQ+E E A ++NTI L+TGSGKTLIA++LLR + ++ FLV
Sbjct: 71 REYQIELFERAKQENTIAVLDTGSGKTLIAVLLLRWIIDHEIENRAKGSQAKISFFLVAS 130
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ ++ + D KV + G D WD W +E +++ +V T +IL L
Sbjct: 131 VTLVYQQFAVLETNLDHKVARLCGADNTDRWDKTRWMKECYENKAIVCTAEILFQALSFG 190
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y + I +LI DE HH + H YA I+ +FY LE + PRIFGMTASPI +K+
Sbjct: 191 YLTMKQINLLIFDEAHHTKKNHSYARIIKDFY---LEEEVHDRPRIFGMTASPIDAKM-- 245
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D Q H+LE L++SK+ T + S+ S K + +Y +P A + E
Sbjct: 246 ---DVIQAAHELEALLDSKIATTSDMSLSS---AIKKPKEQIMRYPSLPQAGF-----ET 294
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
+++ R + + +KI + LG W A Y D
Sbjct: 295 PLLQAVRARYSD------------MTQFTKIFTRAAEVARHLGSWCA-------DFYLLD 335
Query: 318 FFAWEQLDGFGETIIKKFGSDASQALVTYVPSG-----AEWSIGDDSKFNLDSGLLTEKI 372
+ E+ + +KF + + V + A + + + LD+ + ++I
Sbjct: 336 CLSDEKSKRYKLAAEQKFHARNAGREVAALDRALKRIDAAVAFAQEHRNILDTEITRDRI 395
Query: 373 VCLIESLLEYRGVE-----DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS 427
+ L Y + RCI+FV++ TA +L SL + H K+ ++ G+ +
Sbjct: 396 SSKVYELYRYLAEQFERPSSNRCIVFVDKRYTARLLNSLFQRIKSPHM--KSTFLIGSGN 453
Query: 428 GIQCQ---SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
Q + S ++Q ++ +FR+G +N + ATS+ EEGLDV CNL+I FD T+ ++Q
Sbjct: 454 TGQDEDNFSFRQQVMVLLKFRKGDLNCLFATSVAEEGLDVPDCNLIIRFDMYATMIQYVQ 513
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS-HASLPCSPLNNHMYG- 542
SRGRAR QNS ++ MV++G+S + + N++R LS A P + + G
Sbjct: 514 SRGRARNQNSKFIHMVENGNSIHKETV-------NEVRYAELSMRAYCDQLPEDRKLQGN 566
Query: 543 ----EDFYHVESTGTIA---------TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-- 587
E E + T ++++++ + S +P+DG+ P + ++
Sbjct: 567 SDSIEALMERERNMEVRVDPVSKAKLTYGNALNILATFVSAIPTDGHEMQHPTYVVSSRG 626
Query: 588 EMGICTLYLPNNCPIQTVIAQ-GNIKTL-KQAACLEACKKLHQIGALTDNLLPDIVVEKH 645
+ +C + LP N P++++I + KTL K++A EA +L + + +NL+P + K
Sbjct: 627 QKFVCEVVLPGNSPLRSMIGKVHQKKTLAKRSAAFEAVIELRKKSWINENLMP-VYQRKL 685
Query: 646 DAQKRG----NEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVL 701
A + + ++ + P++ + + +I+ + D + I
Sbjct: 686 PAMRNALLAVDMKKTNQYAMRIKPKIWAEQRGTLPVQLWITVIDFPEKL--DRVHQPIAF 743
Query: 702 AMRTELESEIKKVNFDLEVERGRL-TVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
RT++ + +F + + GR TV LG L+ + L ++ FRV D
Sbjct: 744 LTRTQMP---QFPSFPIYLNDGRATTVKSADLGAPLLVDQERL--KKLTAFTFRVFRD-- 796
Query: 761 LDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSK-HNMNCSTMFNA 819
+ D ++ Y L P AT+L D S HN++ T +
Sbjct: 797 ------VFSKTYEEDAAKLSYWLAP-----------ATLLLSTDQASSAHNIDPMTAIDW 839
Query: 820 RIVH----------TKSGPLCTCKIHNSLVCTPHNG--QIYCITGVLGHLNANSLFTRN- 866
R++ T S P + + + +G + Y I GV L+ + +
Sbjct: 840 RLLEDVLDNDEYKWTPSTP--HDRFVDKFIVDMFDGSRKFYSI-GVDSSLHQDDPIPEHA 896
Query: 867 ------------NGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQK 914
N SV+ +KK + R Q +P++ + +N L+ +QK+
Sbjct: 897 SKGKGNRGGSIMNYSVSLWKKSRQARVWSQ----NQPVVEADIVLQRRNMLAPP-EQKEL 951
Query: 915 EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-N 973
P ++ + PE RI + I+ + S P+I HR +S L+++ + C
Sbjct: 952 APVTKAY-IVPEPLRI--SAITPNVAASCFVWPAIAHRFESCLISI-------EGCEAVG 1001
Query: 974 VTIPTIKVLEAITTKKCQEDFH---------------LESLETLGDSFLKYAASQQLFKT 1018
VT L A T + H E LE +GD+FLK A + F
Sbjct: 1002 VTCGPEFALAAFTKDSDNQGEHEAEERVNFQRGMGENYERLEFIGDTFLKTATTISTFIM 1061
Query: 1019 YQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG----DNSGSYE 1074
N +E V++ ++ N L + + KL +IR+ +F+ + W G +G +
Sbjct: 1062 NPNENEFEFHVRRMLMLCNKNLYQTALQLKLYEYIRSLAFNRRYWYPEGLKLLVGTGVVK 1121
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLS--TGGEN-------------V 1118
+ +++ + G KT+ADV EALIG A+LS GE
Sbjct: 1122 GQEKEMYHEPREVGLG-----EKTIADVCEALIGAAYLSHDKPGEAWEPEHWRDAVRAVT 1176
Query: 1119 GLIFLD--RIGIKVDFVNV----PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEAL 1172
L+ D ++ D+++ YQ ++ + +R +E Y+F P LL A
Sbjct: 1177 KLVKSDDHKMQTWQDYIDAYDKPAYQTGESTAVQKDLALR-VEKEHAYTFTYPRLLYSAF 1235
Query: 1173 THGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY 1230
H S YM ++P YQRLEFLGDA+LD YL+ KYP P +LT+ + A V+N
Sbjct: 1236 MHPSVPYMYEKVP-SYQRLEFLGDALLDMASITYLFYKYPDKDPQWLTEHKMAMVSNKFL 1294
Query: 1231 ALSSVKHGLHKHILH----ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDII 1286
V G HKH+ H H++ +++ G W +V+ PK L DI+
Sbjct: 1295 GALCVDIGFHKHLRHHHATLEHQVRDYATELLEAKRIAGKGCVDYWTTVSDPPKCLPDIV 1354
Query: 1287 ESLAGAIFVDS 1297
E+ GA+F+DS
Sbjct: 1355 EAYIGAMFIDS 1365
>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
Length = 1695
Score = 340 bits (871), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 265/832 (31%), Positives = 406/832 (48%), Gaps = 97/832 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK-PSPFVAVFLVPKVVL 80
AR YQLE L A + T+ FL+TG+GKTLIAI+L++ +LR+ +A+FLVPKV L
Sbjct: 23 ARTYQLEVLAQAKVKITVAFLDTGAGKTLIAILLMKHKHQVLREYDKRMLALFLVPKVPL 82
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQA+ I+ T VG Y G+MG FWD W+ E +V VMT QILL+ LR S K
Sbjct: 83 VYQQADVIRNGTKFSVGHYCGEMGSRFWDARGWQREFDTKDVFVMTAQILLNILRHSIVK 142
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFY L T P +FGM ASP+ K S+++
Sbjct: 143 MEAIHLLILDECHHAVKKHPYSLVMSEFY---LMTPKDKRPCVFGMIASPVNLKGVSNQE 199
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI 260
D +I +LE+ ++S V T L +P + Y + +L A +
Sbjct: 200 DCAIEIRNLESKLDSIVCTIRDRKELEKHVPLPSETMILYDKPALLFSLRKERKQMEATV 259
Query: 261 ELKHTRSL----------------ENLDLNEAQAELIRK----KVSKINSTLLYCLSELG 300
E S+ E L L + AE +S+ + Y L ELG
Sbjct: 260 EKAANASVRRSKWKCMGARDAGAKEELQLVYSVAERTESDGAASLSQKLRAITYALDELG 319
Query: 301 VWLALKAA-ETISCYESDFFAWEQLD-GFGETIIKKFG-----SDASQALVTYVPSGAEW 353
W A K + ++ +D QLD F + +KK S A VP+
Sbjct: 320 QWCAYKVSLGYLTSLHNDERVNHQLDVKFQKLYLKKVCTLLRCSLREGAAGWEVPAEIGE 379
Query: 354 SIGDDSKFNLD-------------------------SGLLTEKIVCLIESLLEYRGVEDI 388
S GD ++ +D G +T K+ LI+ L+ Y+ +D
Sbjct: 380 SEGDKAQDPMDVEEGSFLTLVSVGEHLDEILGAAVADGKVTPKVQSLIKVLIGYQHTDDF 439
Query: 389 RCIIFVERVITAIVL-QSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRG 447
R IIFVERV + L +SL S P K + G+N+ +R+ Q E + +FR G
Sbjct: 440 RAIIFVERVWVGVTLCRSLQS--CPSLKFVKCASLIGHNNNQDMPTRQMQ-ETISKFRDG 496
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
V ++VATS+ EGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+
Sbjct: 497 RVTLLVATSVAAEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNLQH 556
Query: 508 QSRLENYLASGNKMRKEVLSHASLPCSPLNNHM----YGE-DFYHVESTGTIATLSSSVS 562
++ N S +RKE + L N + GE + Y V +TG + +++S+V
Sbjct: 557 EAFFRNAKNSEETLRKEAIERTDLGEKRENAILASIDIGEGEIYQVPATGAVVSMNSAVG 616
Query: 563 LIYFYCSRLPSDGYFKPTPKFHINK---EMGI----CTLYLPNNCPIQTVIAQ--GNIKT 613
LI+FYCS+LPSD Y P+F +NK + G C L LP + P + V +++
Sbjct: 617 LIHFYCSQLPSDRYSLLRPEFIMNKIEDQRGAIRYSCRLQLPCHAPFEAVEGPECNSMRG 676
Query: 614 LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHPIYFPP--- 665
+Q+ LE +K+H++GA TD LL + + A+ G+E P + H Y+P
Sbjct: 677 AQQSCVLEGLQKMHEMGAFTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIA 736
Query: 666 ------ELVNQSPQDT----KITYHCYLIELKQ-HFNYD---ISARNIVLAMRTELESEI 711
+V + DT K+ Y ++ + F+ D + L + +L ++
Sbjct: 737 DILKGDRIVAEKDSDTKEGSKVLVFMYTVKCENVGFSRDSLLTETSDFTLLVGQQLHDQV 796
Query: 712 KKVNFDLEVERGRLTVNLKHLGR-IQLIPNQVLLCRRFQITLFRVIMDHNLD 762
+ +L V L + + R + +Q+ + F + L +++D N++
Sbjct: 797 LTMTINLFVANPTLLITMSWKKRDLDCSNSQLTELKSFHVRLMSIVLDVNVE 848
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 319/611 (52%), Gaps = 79/611 (12%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + V + A+S F + +G + T+Y +Y+++YG++L ++PL
Sbjct: 991 IVTAVHSGKRLYVDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVELVCKKQPL 1050
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFE---------LPPELCRIIMAPISLSTFYSF 943
L GR + H +N LS + E S S + LPPELC ++ P+ S
Sbjct: 1051 LRGRGVSHCKNLLSP-----RFETSGDSLDALDKTYYVMLPPELC--LIHPLPGSLVRGA 1103
Query: 944 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLG 1003
+PS+M R++S+LLA+ LK+ + + I KV A+T QE F E E L
Sbjct: 1104 QRLPSVMRRVESMLLAIQLKHQI------DYPIAASKV--ALTAASGQETFSYERAELLS 1155
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D++L++ S +LF + + HEG L+ +++I+SN+ L + E+ L +I+ + F P W
Sbjct: 1156 DAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHALEKGLQSYIQADRFAPSRW 1215
Query: 1064 IIPG------------DNSGS---------------------YELNDDS--LFNGRKIYV 1088
PG D+S ELN +S + +G
Sbjct: 1216 AAPGVPPAFDEDLRDGDDSDKESKPEVEREVVEIVGEEGEIVKELNTESENMEDGEIEGD 1275
Query: 1089 TGRKKV-KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR-----QFQ 1142
+G +V SKT+ADVVE +G + GG F++ +GI V+F +V Q
Sbjct: 1276 SGSYRVLSSKTLADVVEVFMGMYYVEGGGEAATHFMNWVGIPVEFDDVETDLATGGCQVP 1335
Query: 1143 VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
R ++ L+ + + FR+ SLLVEA+TH S +P CYQRLEF+GDAVLD+LIT
Sbjct: 1336 ETVMRSIDFSSLQKNVGHEFRERSLLVEAITHASRPSLGVP-CYQRLEFVGDAVLDHLIT 1394
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI-NITVDSF 1261
YL+ KY L PG LTD+R+A+VNN+ +A +VKH H H+ H S L +I N D
Sbjct: 1395 RYLFFKYTNLPPGRLTDLRAAAVNNENFARVAVKHSYHLHLRHGSTALETQIRNFVNDIH 1454
Query: 1262 EKLSLG--STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPE 1319
+L ++FG + PK LGDI ES+AGA+F+D+ + V++ PLL+PM++PE
Sbjct: 1455 SELDKPGVNSFGLGDFKA-PKVLGDIFESIAGALFLDARLDTHQVWKVFEPLLQPMVSPE 1513
Query: 1320 TMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKK 1379
T+ HPVR L E CQ+ ++ V+ ++ TVEV +G T A KK A+K
Sbjct: 1514 TLPIHPVRGLQERCQQEAEGLEYKVS---RAESVATVEVYVDGVQIGST-QSAQKKMAQK 1569
Query: 1380 VACKEVLKSLR 1390
+ + L L+
Sbjct: 1570 LGARNALVKLK 1580
>gi|357131511|ref|XP_003567380.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1183
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 292/1003 (29%), Positives = 465/1003 (46%), Gaps = 132/1003 (13%)
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLN 537
T C RG QN+ + +S S ++ N+ K++L H SP+
Sbjct: 59 TECQDFTPRGVDAEQNNLASAISRSKTSMVETAF-------NRDSKDLLPH----LSPVK 107
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGICTLY 595
+ + H+ + G AT+ SS+S+I YC +LP D Y P F + + +CTL
Sbjct: 108 DR----NGCHIGTAG--ATVDSSISIISEYCDKLPKDKYHTTRPSFEFTHHDDGFVCTLT 161
Query: 596 LPNN---CPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPD------------- 639
LP++ P++ A+ K KQ CL+ACK+L +G D L P
Sbjct: 162 LPSSDVLPPLEGPKARSKQKA-KQLVCLDACKQLDLLGVHDDCLCPSLKEPPVEIVNKAS 220
Query: 640 IVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSP----QDTKITYHCYLIELKQHFNYDIS 695
++ QKR E + F ++ Q K+ + C ++ Q ++
Sbjct: 221 VLTSNAGVQKR-KELHGTTRACAFSGTWASKRTVIKLQGYKLNFSCD--QVGQKYS---- 273
Query: 696 ARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRV 755
VL + T + +E ++ +L + + ++ G ++L Q+ + FQ +F
Sbjct: 274 --EFVLLIDTTIANEAANLDINLYLHDKMVKASVSPCGLLELDVQQMEQVKLFQALIFNG 331
Query: 756 IMDHNLDKLNEILDGFEL----RDNLEID----YLLLPSTGQL-------IDWKTV---- 796
+ E DNL + YLLLP L I+W+ +
Sbjct: 332 LFGKLFTGSKSSNSSREFILNKDDNLIWNNANMYLLLPMDPTLESHDSFCINWRVIDEAA 391
Query: 797 ATVLFPRDNGSKHNMNCSTMFN-----ARIVHTKSGPLCTCKIH---NSLVCTPHNGQIY 848
V R S MN + + ++H + +C++H N V H G+IY
Sbjct: 392 TAVRLMRKIHSDGKMNLLAILDFDQIYGDLIHLAN---TSCEVHTLRNVAVLAVHTGKIY 448
Query: 849 CITGVLGHLNANSLF----TRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY 904
V L+ANS F ++ T+ +++E++Y I L +PLL + + N
Sbjct: 449 TALHVT-DLSANSTFDGVSSKKESGFKTFTEYFEKKYDIVLRHPSQPLLVLKPSHNPHNL 507
Query: 905 LSK-------CRQQKQKEPS----KIS--FELPPELCRIIMAPISL--STFYSFTFVPSI 949
LS C + + + + K++ +PPEL + P++L +F PS+
Sbjct: 508 LSSKIRDEGPCYGENKNDGTTDVIKVNNRVHMPPEL----LIPLNLPEDILRAFYLFPSL 563
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKY 1009
M+R+++L+LA L++ + + I + +LEAITT +C EDF +E LE LGDS LKY
Sbjct: 564 MYRMETLMLASQLRSEI----AYDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKY 619
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDN 1069
A S LF + + HEG LS + IISNAAL +LG + K+ G+IR +FDP+ W+ PG
Sbjct: 620 AVSCHLFLKFPDKHEGQLSSSRIDIISNAALHRLGIKHKIQGYIRDAAFDPRRWLAPGQR 679
Query: 1070 SG---------SYEL--NDDSLFNGRKIYVTGRKKVK------SKTVADVVEALIGAFLS 1112
+ YE+ D + + + G+ K SKT++D VEA+IGA+
Sbjct: 680 TNRPFHCKCPVDYEVVTKDIHVIDEKPTIKIGQACDKGHRWMCSKTISDCVEAIIGAYYV 739
Query: 1113 TGGENVGLIFLDRIGIKVD-----FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSL 1167
GG + L +G+ + + + + ++ V LE+ L Y+F L
Sbjct: 740 GGGLRAAVAVLRWLGVDAEIEEELIMQTILSASMKTYVPKIDLVEALEAKLGYAFSVKGL 799
Query: 1168 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
L+EALTH S+ E Y+RLEFLGDA LD L+T +L++ + G LTD+RSASVNN
Sbjct: 800 LLEALTHPSHQESEERYSYERLEFLGDAALDILLTWHLFSSHKDTDEGELTDLRSASVNN 859
Query: 1228 DCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS-TFGWESVTSFPKALGDII 1286
+ +A +VKH LH + +S L +I +S E S+ ++ PK LGDI+
Sbjct: 860 ENFAKVAVKHKLHHFLQQSSGILLDQITEYANSLENSSMDEINLSSDAPLRGPKVLGDIV 919
Query: 1287 ESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVAS 1346
ES+AGAI +D+ + +VV +PLL P++TPE + P REL E+C KN + + +
Sbjct: 920 ESIAGAILIDTKLDLDVVRGVFKPLLSPIVTPENLELPPFRELLEWCNKNGYFLG--IKC 977
Query: 1347 RISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
K ++VQ L +KK AK A +LK L
Sbjct: 978 TDGDKIQAILDVQLEDVLVIRRGFGKNKKDAKAHAASMLLKDL 1020
>gi|221361577|emb|CAX18337.1| dicel-like 2 [Nicotiana benthamiana]
Length = 224
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/224 (73%), Positives = 185/224 (82%)
Query: 976 IPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERII 1035
IPT KVLEAITTKKC E FHLESLETLGDSFLKYAAS QLFKTY+N+HEGLL+VKK II
Sbjct: 1 IPTAKVLEAITTKKCVEKFHLESLETLGDSFLKYAASIQLFKTYENHHEGLLTVKKNSII 60
Query: 1036 SNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
SNAALCKLGC +K+PGFIR E FD K W+IPGDNS Y +++ L K+Y GR+K K
Sbjct: 61 SNAALCKLGCARKIPGFIRNEPFDLKGWLIPGDNSQVYNFDEEVLMPSVKMYSRGRQKTK 120
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLE 1155
SK VADVVEALIGAFLS+GGE L F+ +GI +DFV+ P R F ++AE+LVNVR+LE
Sbjct: 121 SKRVADVVEALIGAFLSSGGEVAALSFMKWLGIDIDFVDAPSPRHFPMNAEKLVNVRYLE 180
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
SLL+Y F DPSLLVEALTHGSYMLPEIPRCYQRLEFLGD VLDY
Sbjct: 181 SLLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDVVLDY 224
>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
Length = 1452
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 381/1426 (26%), Positives = 608/1426 (42%), Gaps = 242/1426 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY------AYLLRKPSPFVAVFLVP 76
R YQ+E E A ++NTIV L TG+GKTLIA +LLR Y + KP VA FLV
Sbjct: 60 REYQIELFERAKQKNTIVVLPTGTGKTLIAALLLRHYLEQEMEDRAIGKPKK-VAFFLVE 118
Query: 77 KVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
KV L QQ + + + + K+WG+M W ++ S++ V+V T QIL+D L
Sbjct: 119 KVALCYQQYAVLNCNLGEHPITKFWGNMKGMVRKKQYWDQQFSENMVVVCTAQILVDCLN 178
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
+ K++ I +LI DE HHA+ H YA IM Y R PRI GMTASP+ S+
Sbjct: 179 DGFIKMSQINLLIFDEAHHAKKDHPYARIMRNHYIRY----QGERPRILGMTASPVDSQT 234
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLAD 255
+D +LET + S++ T + +E P T L D
Sbjct: 235 ----KDVKAAALELETFLCSEIATVS---------------------NEFPEDAKTQLWD 269
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET---IS 312
+ L++++ +A E ++ S + S +C + L L ET ++
Sbjct: 270 LIWAQVLRNSQF-------KASLEFTKEAASTLGS---WCADRYWI-LLLTDNETKRLVA 318
Query: 313 CYESDF---FAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT 369
+ DF FA Q D E + + + L PS E L+
Sbjct: 319 RTDRDFSRDFATNQADHATEAVRRVRDIVKKRELPPIEPSSPE---------------LS 363
Query: 370 EKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
K+ L E LL + RCI+FVE+ TA +L L + R Y+ G+ S
Sbjct: 364 PKMKKLHEILLHAFTRDSTKRCIVFVEKRHTAWLLSDLYQQQGMRIPGMVAYYMIGSQSA 423
Query: 429 IQCQSR---KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
S + Q +++F+RG +N + AT++ EEG+DV C+LVI FD +V ++QS
Sbjct: 424 SSTHSNMSHRDQVVTLQKFKRGSINCLFATTVAEEGIDVPDCDLVIRFDLYNSVIQYLQS 483
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC---------SPL 536
+GRAR NS Y+ M++ G+ L+ ++K L SLP +
Sbjct: 484 KGRARQSNSRYITMLEEGNMGQLRSLKQAERDSTALQKFCL---SLPADRKLEDDVVDAV 540
Query: 537 NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRL----PSDGYFKPT---PKFHINKEM 589
+ + + Y + STG T + S+ ++ Y + + S F T PKF
Sbjct: 541 QDELLVQKVYEIPSTGARLTFAHSMDVLSKYAASITPGVSSKVEFTVTKLGPKF------ 594
Query: 590 GICTLYLPNNCPIQTV--IAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDI---VVEK 644
I + LP+ P++ + Q + K +A EAC KL + + +L P + +
Sbjct: 595 -IADVILPDASPLKAMSGFPQRSKLLAKYSAAFEACVKLIKDKHIDGHLQPTLSKTIPRM 653
Query: 645 HDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYL-IELKQHFNYDISARNIVLAM 703
+A+ + AE+P+ P+ V +S D K + + ++ D+ +R ++L
Sbjct: 654 RNARLAVSSNKKAEYPMRLRPD-VWKSLGDCKELFSTIITLDNPGALGEDLLSRPLMLLS 712
Query: 704 RTELESEIKKVNFDLEVER---GRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
R +L ++ V R +LTV+ + L +L ++ RF + LF +
Sbjct: 713 RNKL-PDLPGVPLFFGNGRSSVAKLTVSEESL---KLTSEEIDALTRFTLKLFSDVFSKE 768
Query: 761 LDKLNEILDGFELRDNLEIDYLLLP------STGQLIDWKTVATVLFPRDNGSKHNMNCS 814
D + + Y L P S Q +DW V N S N
Sbjct: 769 FDASAD-----------RLPYFLAPCKDGHSSVSQAVDWSIVEAT----KNDSLPWENAP 813
Query: 815 TMFNARIVHTKSGPLCTCKIHNSLVCTPHN-GQIYCITGV-----------LGHLNANSL 862
F N V P++ G+ I G+ G + S
Sbjct: 814 KEF----------------FVNKFVTDPYDGGRKLVIKGIDESKKPSDPTPEGVPESRSR 857
Query: 863 FTRN-NGSVTTYKK--HYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKI 919
R ++ Y +Y R ++ D +P++ + + +NYL + Q +E +
Sbjct: 858 AYRQVEPTIKEYSNSLYYNTRLKVKWRED-QPVVKAQMLSLRRNYLDEF--QVDEEVNND 914
Query: 920 SFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPT 978
F + L + ++PI L + P+I+HR+ + L+ LD C M ++ IP
Sbjct: 915 CFVI---LEPLRVSPIPLDVAFMVMAFPAIIHRIDAALIT-------LDACAMLDLPIPP 964
Query: 979 IKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHE 1024
+ LEA+T H E LE LGDSFLK A + LF + E
Sbjct: 965 VLALEAMTKDSDNSGEHDEEQVNFQPGMGSNYERLEFLGDSFLKMATTISLFTLIPESDE 1024
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR 1084
V++ +I N L ++KL +IR+++FD + W D L G+
Sbjct: 1025 CGYHVERMILICNQNLFNHAVDRKLHEYIRSKAFDRRSW-----------YPDLPLKKGK 1073
Query: 1085 KIYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLIF-------------LDRIGIKV 1130
R + K++ADV EALIG A+LS G ++ L +++
Sbjct: 1074 APKTEMRHNLADKSIADVCEALIGAAYLSGKGGSMDLAVKAVTRMVKSKNHKMEKFEDYF 1133
Query: 1131 DFVNVPYQRQFQ--VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
+P +Q + V+ RLV+ + + Y F+ P+LL A H S+ +P YQR
Sbjct: 1134 AAFKMPAWQQAEANVNQRRLVDC--VADAVGYRFKWPALLRSAFKHPSWPYDPVPN-YQR 1190
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGDA+LD I L+ ++P P +LT+ + A +N VK LHKH+ +
Sbjct: 1191 LEFLGDALLDMAIVDNLFQRFPQADPQWLTEHKMAMASNQFLGCLCVKLDLHKHLTSTTS 1250
Query: 1249 ELYKRINITVDSFE-------------KLSLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
L +I+ E K ++ F W ++ PKA D++E+L GA+FV
Sbjct: 1251 SLIGQISSYASELELAEEDARQEAKANKTAMRKDF-WLRASAPPKAFADVMEALVGAMFV 1309
Query: 1296 DSGCNREVV----FQSIRPLLEPMITPETM-RFHPVRELTEYCQKN 1336
D+ + VV + I P E M ++ HPV L++ Q++
Sbjct: 1310 DAKYDYTVVRNFFTRFIEPYFEDMALYDSFANKHPVTYLSKKMQQD 1355
>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1546
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 379/1402 (27%), Positives = 590/1402 (42%), Gaps = 204/1402 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR--------SYAYLLRKPSPFVAVFL 74
R YQ+E E A QNTI L+TGSGKTLIA++LLR A F VF+
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVFV 186
Query: 75 -------------VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
V V L QQA ++ + D V ++G MG D WD TW + + ++
Sbjct: 187 LLALGRCILTWCKVDSVTLAYQQAAVVRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNM 246
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
V+V T +IL L SY +++ I +LI DE HHA+ H YA I+ + Y + S P
Sbjct: 247 VIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSY---FKAQPSQRP 303
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
R+FGMTASPI +K +E + LET ++S++ T + ++L + K Y
Sbjct: 304 RVFGMTASPIDTKGDITEAATYVLSRRLETFLDSRIATTSKITLLREVVSRPIEKVWAYN 363
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGV 301
E P A + +L TR N+ + E S++ +C S+
Sbjct: 364 RLEPPFAT--------ELYKLMDTR-YGNIKVLEGVYRFAWNASSELGK---WC-SDRAW 410
Query: 302 WLALK-------AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS 354
W AL ES+ E F + I + +AS+ + Y + E
Sbjct: 411 WHALADDVLPKLEGNINKLIESNTMKAEHGAVFKDIIRIR---EASETVKNYFFTDPELP 467
Query: 355 IGDDSKFNLDSGLLTEKIVCL-IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LP 412
G L+ K+ L +E + +CI+F ++ TA +L L + L +P
Sbjct: 468 -----------GELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIP 516
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
+ + G + ++Q + +FR G +N + ATS+ EEGLD+ CNLVI
Sbjct: 517 NLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIR 576
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHAS 530
FD RT+ ++QSRGRAR S Y +MV+ ++ + RL+ + N MR+ E+L
Sbjct: 577 FDLYRTLIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDR 636
Query: 531 LPCSPLNNHMY--------GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+ N+H G + V+STG T S+++++ Y S L + P
Sbjct: 637 ILHG--NDHDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVT 694
Query: 583 F--HINKEMGICTLYLPNNCPIQTVIAQGNIK--TLKQAACLEACKKLHQIGALTDNLLP 638
+ I +C + LP PI+ + ++ K++A + C L + L D
Sbjct: 695 YVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRK-NRLLDGYFN 753
Query: 639 DIVVEKHDAQKRGN-----EPYNAEHPIYFPPELVNQ--SPQDTKITYHCYLIELKQHFN 691
I + A + + NA + P Q +P +T H L+ K
Sbjct: 754 SIYHRRLPAMRNAKLAITCKRTNAYDMLLKPSIWAKQRTTPTETFYGIHMSLLPSKP--- 810
Query: 692 YDISARNIVLAMRTEL-ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI 750
R I+L R +L E + D +VE L+ LKH +I + Q L +I
Sbjct: 811 LSRDHRPILLLTREKLPEFPAFSIYLDEDVETKVLSYPLKHGLQISVDKLQSLTVFTLRI 870
Query: 751 --TLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSK 808
+F + +H + K+ L E D + IDW TV+ V +
Sbjct: 871 FRDIFHKVYEHEVQKMPYWLAPAEAIDGRGSG----KNPRDCIDWDTVSFVHNNDEITFT 926
Query: 809 HNMNCSTMFNARIVHTKSGPL--CTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRN 866
N+N ++ N I G T + ++L + + ++ +L
Sbjct: 927 RNLNPESLVNRFIFDNWDGRFRYFTVAVADTLQPSDPPPPSVPRRRYMNNIMNYTL---- 982
Query: 867 NGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQK---------EPS 917
+ K+ R+ + C +P+L + +N L K Q+++ EP
Sbjct: 983 -----SLSKNSRARF-LSSCDWNQPVLQAELVRLRRNLLDKMTTQEKEMQTECFICAEPL 1036
Query: 918 KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC--MQNVT 975
+IS LPP + +ST +F P+I+ RL S L+A L+ C ++ V
Sbjct: 1037 RIS-ALPPSI---------VSTCLAF---PAIISRLDSYLIA-------LEACDELELVI 1076
Query: 976 IPTIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQN 1021
P LEA T + H E LE LGD FLK A S LF N
Sbjct: 1077 RPDF-ALEAFTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNPN 1135
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLF 1081
+ E V + +I N L ++++ +IR+ F +W G +L
Sbjct: 1136 DDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWYPDGL----------TLL 1185
Query: 1082 NGR----KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLD----R 1125
+G+ K+ G+ + KT+ADV EALIGA L +GG +D R
Sbjct: 1186 HGKDHSTKLLSEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHR 1245
Query: 1126 IGIKVDFVNVPYQRQFQVHAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------ 1176
+ +++ + ++Q R RH+E L Y F P LL A+TH S
Sbjct: 1246 VSCWKEYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWG 1305
Query: 1177 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVK 1236
Y +P CYQRLEFLGD++LD + L+ ++P P +L++ + A V+N SVK
Sbjct: 1306 YRVP----CYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVK 1361
Query: 1237 HGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
G H+ I+ S+ L +I V+ E S L D++E+ GAIFVD
Sbjct: 1362 LGFHRRIMAFSNPLQAQITHYVEEIETAQAESQGA---------CLPDMVEAYLGAIFVD 1412
Query: 1297 SGCNREVVFQSIRPLLEPMITP 1318
S + FQ I E I P
Sbjct: 1413 SKFD----FQVIEAFFERQIKP 1430
>gi|449453061|ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
Length = 1359
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 343/623 (55%), Gaps = 30/623 (4%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
+EP + V+ +P R YQ+E E +++NTI L TGSGKT+IA+ML++
Sbjct: 20 LEPSVASDQSNFNVAEGFIP--RRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIG 77
Query: 61 YLLRKPS-PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK 119
++ S + +FL P V LV QQ IK HTD +V +Y+G MGVD W+ W++E S+
Sbjct: 78 KAMKSSSDKKLIIFLAPTVHLVHQQFNVIKDHTDFEVAEYYGAMGVDDWNMNCWEKETSE 137
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN 179
+VLVMTPQILLD LR +YF+L I ++I+DECH A G H Y IM EFYH+ DS
Sbjct: 138 RDVLVMTPQILLDALRKAYFRLGTICLMIIDECHRATGNHPYTKIMKEFYHK----SDSK 193
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF 239
P+IFGMTASP+ K SS D +I DLE++++++VY + + ++P + F
Sbjct: 194 -PKIFGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIEDKKEVEIYVPSAKEICIF 252
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLN--------EAQAELIRKKVSKINST 291
Y+ +P + L ++ + K SL N +++ + ++K++S +
Sbjct: 253 YE-PAMPQTM--ELKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLK 309
Query: 292 LLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETII--KKFGSDASQALVTYVPS 349
+ YCL ELG+ A +A + + +E+ E+ D + E+ + K F +A + +
Sbjct: 310 ITYCLDELGIMCAYEAIKVL--FENVSVPNEESDVYRESFLQYKHFLEEALLVIGESLSL 367
Query: 350 GAE--WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV-EDIRCIIFVERVITAIVLQSL 406
E ++G D ++ G ++ K+ L++ L E GV + C+IFVER+I A V++ +
Sbjct: 368 ENENVPTLGFDLWKAVELGYISPKLFELLQ-LFESFGVSRQVLCLIFVERIIAANVIERI 426
Query: 407 LSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
+ ++ + Y+ G N+ + + K Q E +E F G +N++ +T ++EEGL V +
Sbjct: 427 VKKV-ENLSHFTVSYVTGCNASVGALAPKVQKETLELFCHGKLNLLFSTDVVEEGLHVPN 485
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL 526
C+ V+ FD +TV S++QSRGRAR NS Y+L+++ G+ ++ L + + S M +
Sbjct: 486 CSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDRSMTDAAM 545
Query: 527 SHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN 586
S C + D Y VE+TG T SSV L+Y YC +LP D YF P P F ++
Sbjct: 546 SRDLDACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLS 605
Query: 587 KEMGI--CTLYLPNNCPIQTVIA 607
G C L LP +QT++
Sbjct: 606 YGEGSYECQLTLPPTAALQTIVG 628
Score = 286 bits (732), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 278/536 (51%), Gaps = 43/536 (8%)
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNG----SVTTYKKHYEERYGIQLCFDREPLLNGRRI 898
H G+IY I V+ + +A S F N+ T+ ++ +RYGI L F ++PLL ++
Sbjct: 641 HTGRIYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQS 700
Query: 899 FHVQNYLSKCRQQ---KQKEPSKISFE-------LPPELCRIIMAPISLSTFYSFTFVPS 948
+ N L + + K PS +F+ +PPEL ++ + S +PS
Sbjct: 701 HNPHNLLVNFKDEGNTSDKLPSGPAFKRPQMHVHMPPEL--VLSMDVPKGVLKSSYLLPS 758
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
++HR +SL+LA L+ + H ++ I + +LEA+TT E+F LE LE LGDS LK
Sbjct: 759 LIHRFESLMLASQLRKEINYHS-NSLGISSSLILEALTTLGSCENFSLERLELLGDSVLK 817
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD 1068
YA S LF + HEG LS +++++I NA L LG + L G+IR +FDP+ W+ PG
Sbjct: 818 YAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSAFDPRRWVAPGQ 877
Query: 1069 ------------NSGSYELNDDSLFNGRKIYV-----TGRKKVKSKTVADVVEALIGAFL 1111
++ L+D K+ + G + V SKT+AD EALIGA+
Sbjct: 878 CTNRPVPCKCGVDTVEVPLHDKFCTEDPKVVLGKCCDKGHRWVVSKTIADCAEALIGAYY 937
Query: 1112 STGGENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPS 1166
GG L + +GI V+ V+ + + LES + Y F
Sbjct: 938 VDGGIIAALHVMKWLGIDVNLDVALVVDAITSASLRSCPLGDTEIATLESKIGYDFAVKG 997
Query: 1167 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN 1226
LL+EA+TH S + CYQRLEFLGD+VLD LIT + Y Y + PG LTD+RSASVN
Sbjct: 998 LLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVN 1057
Query: 1227 NDCYALSSVKHGLHKHILHASHELYKRINITVDSF-EKLSLGSTFGWESVTSFPKALGDI 1285
N+ +A +V+ L +H+ H S L +I V E G PK LGD+
Sbjct: 1058 NENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSESQDTGKPLHG---NKGPKVLGDM 1114
Query: 1286 IESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
+ES+AGAI +D+ N + V++ +PLL P +TP+ + P+REL E C + +K
Sbjct: 1115 VESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSLGYFIK 1170
>gi|315258243|gb|ADT91700.1| dicer-like protein 2 [Nicotiana attenuata]
Length = 239
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 194/236 (82%)
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYV 1088
VKK +IISNAALCKLGC +K+PGFIR+E FD K W+IPGDNS +++ L K+Y
Sbjct: 1 VKKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGDNSQVQNFDEELLMPSVKMYS 60
Query: 1089 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL 1148
GR+K+KSK VADVVEALIGAFLS+GGE L F+ +G+ +DFV+ P R F ++AE+L
Sbjct: 61 RGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGVDIDFVDAPTPRHFPMNAEKL 120
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
VNVR+LESLL+Y F DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY +T +LY K
Sbjct: 121 VNVRYLESLLDYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYAVTAHLYFK 180
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
YPGLSPG++TD+RSASVNN+CYA ++VK GLHKHILHAS +L ++I TV +FEKL
Sbjct: 181 YPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILHASQDLQRQIVNTVLNFEKL 236
>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1546
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 394/1487 (26%), Positives = 620/1487 (41%), Gaps = 207/1487 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR--------SYAYLLRKPSPFVAVFL 74
R YQ+E E A QNTI L+TGSGKTLIA++LLR A F VF+
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVFV 186
Query: 75 -------------VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
V V L QQA ++ + D V ++G MG D WD TW + + ++
Sbjct: 187 LLALGRCILTWCKVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNM 246
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
V+V T +IL L SY +++ I +LI DE HHA+ H YA I+ + Y + S P
Sbjct: 247 VIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSY---FKAQPSQRP 303
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
R+FGMTASPI +K +E + LET ++S++ T + ++L + K Y
Sbjct: 304 RVFGMTASPIDTKGDITEAATYVLSRRLETFLDSRIATTSKITLLREVVSRPIEKVWAYN 363
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGV 301
E P A + +L TR N+ + E S++ +C S+
Sbjct: 364 RLEPPFAT--------ELYKLMDTR-YGNIKVLEGVYRFAWNASSELGK---WC-SDRAW 410
Query: 302 WLALK-------AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS 354
W AL ES+ E F + I + +AS+ + Y + E
Sbjct: 411 WHALADDVLPKLEGNINKLIESNTMKAEHGAVFKDIIRIR---EASETVKNYFFTDPELP 467
Query: 355 IGDDSKFNLDSGLLTEKIVCL-IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LP 412
G L+ K+ L +E + +CI+F ++ TA +L L + L +P
Sbjct: 468 -----------GELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIP 516
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
+ + G + ++Q + +FR G +N + ATS+ EEGLD+ CNLVI
Sbjct: 517 NLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIR 576
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHAS 530
FD RT+ ++QSRGRAR S Y +MV+ ++ + RL+ + N MR+ E+L
Sbjct: 577 FDLYRTLIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDR 636
Query: 531 LPCSPLNNHMY--------GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+ N+H G + V+STG T S+++++ Y S L + P
Sbjct: 637 ILHG--NDHDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVT 694
Query: 583 F--HINKEMGICTLYLPNNCPIQTVIAQGNIK--TLKQAACLEACKKLHQIGALTDNLLP 638
+ I +C + LP PI+ + ++ K++A + C L + L D
Sbjct: 695 YVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRK-NRLLDGYFN 753
Query: 639 DIVVEKHDAQKRGN-----EPYNAEHPIYFPPELVNQ--SPQDTKITYHCYLIELKQHFN 691
I + A + + NA + P Q +P +T H L+ K
Sbjct: 754 SIYHRRLPAMRNAKLAITCKRTNAYDMLLKPSIWAKQRTTPTETFYGIHMSLLPSKP--- 810
Query: 692 YDISARNIVLAMRTEL-ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI 750
R I+L R +L E + D +VE L+ LKH +I + Q L +I
Sbjct: 811 LSRDHRPILLLTREKLPEFPAFSIYLDEDVETKVLSYPLKHGLQISVDKLQSLTVFTLRI 870
Query: 751 --TLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSK 808
+F + +H + K+ L E D + IDW TV+ V +
Sbjct: 871 FRDIFHKVYEHEVQKMPYWLAPAEAIDGRGSG----KNPRDCIDWDTVSFVHNNDEITFT 926
Query: 809 HNMNCSTMFNARIVHTKSGPL--CTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRN 866
N+N ++ N I G T + ++L + + ++ +L
Sbjct: 927 RNLNPESLVNRFIFDNWDGRFRYFTVAVADTLQPSDPPPPSVPRRRYMNNIMNYTL---- 982
Query: 867 NGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQK---------EPS 917
+ K+ R+ + C +P+L + +N L K Q+++ EP
Sbjct: 983 -----SLSKNSRARF-LSSCDWNQPVLQAELVRLRRNLLDKMTTQEKEMQTECFICAEPL 1036
Query: 918 KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIP 977
+IS LPP + +ST +F P+I+ RL S L+A+ + L + I
Sbjct: 1037 RIS-ALPPSI---------VSTCLAF---PAIISRLDSYLIALEACDEL------ELVIR 1077
Query: 978 TIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNH 1023
LEA T + H E LE LGD FLK A S LF N+
Sbjct: 1078 PDFALEAFTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNPNDD 1137
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG 1083
E V + +I N L ++++ +IR+ F +W G +L +G
Sbjct: 1138 EFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGFSRHIWYPDGL----------TLLHG 1187
Query: 1084 R----KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------IFLD----RIG 1127
+ K+ G+ + KT+ADV EALIGA L +GG +D R+
Sbjct: 1188 KDHSTKLLSEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVS 1247
Query: 1128 IKVDFVNVPYQRQFQVHAERLVN---VRHLESLLNYSFRDPSLLVEALTHGS------YM 1178
+++ + ++Q R RH+E L Y F P LL A+TH S Y
Sbjct: 1248 CWKEYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYR 1307
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHG 1238
+P CYQRLEFLGD++LD + L+ ++P P +L++ + A V+N SVK G
Sbjct: 1308 VP----CYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLG 1363
Query: 1239 LHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
H+ I+ S+ L +I V+ E S L D++E+ GAIFVDS
Sbjct: 1364 FHRRIMAFSNPLQAQITHYVEEIETAQAESQGA---------CLPDMVEAYLGAIFVDSK 1414
Query: 1299 CNREVV----FQSIRPLLEPMITPETM-RFHPV----RELTEYCQKNHFSMKKPVASRIS 1349
+ +V+ + I+P E M +T HP +LT ++ +K I
Sbjct: 1415 FDFQVIEAFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNYCLKAGELPTID 1474
Query: 1350 GK-AAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFPG 1395
G A V V +G + + + AK A ++ L L P
Sbjct: 1475 GAPATVLAAVIVHGNVISEA-RSSSSRYAKITASEKALAVLDGLLPS 1520
>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
Length = 1416
Score = 337 bits (863), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 377/1467 (25%), Positives = 640/1467 (43%), Gaps = 220/1467 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--------VAVFL 74
R YQ++ E A ++NTIV L+TGSGKTLIA +L+R ++L++ + A FL
Sbjct: 3 REYQVDLYERAKQENTIVVLDTGSGKTLIAALLMR---HILQRELQYRADGHKHQYAFFL 59
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V KV L QQ + + + +GK++G+M W ++ ++H V T QILLD L
Sbjct: 60 VEKVALCFQQHAVLTCNLEFPIGKFYGEMTGIIRTQEYWDKQFAEHMAFVCTAQILLDLL 119
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ ++ I +++ DE HHA+ H YA I+ + Y R + PRI GMTASP
Sbjct: 120 ACGFISMSQINLIVFDEAHHAKKSHPYARIIKDHYLR----AGNERPRILGMTASP---- 171
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK-FYKYDEIPHALYTHL 253
V + +D +LE+++ SK+ T ++++++ + + K FY E P T L
Sbjct: 172 VDALTRDVRYAAAELESMLCSKIATITDDAMMASQAHRNQVEVKEFYDRLEDPENSKTRL 231
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
I +H R Q + + + +STL G W A + + ++
Sbjct: 232 WG----IIFQHVR-------GNPQFKGHLEFAANASSTL-------GTWCADRYWKLLTT 273
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGL--LTEK 371
+++ E G + SD + A V A I D + + SG L+ K
Sbjct: 274 -DAEMIKLEARTGRDSFDVDVTASDEAMAAV----RRAREEIRDYNLGPIVSGSPELSSK 328
Query: 372 IVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSE---LLPRHCTWKTKYIAGN-- 425
+ L E L + + + RCI+FV+ TA +L L + L+P Y+ G+
Sbjct: 329 VKLLHEVLEDAFCKRQTKRCIVFVQARSTAFILADLFQQPGMLIP---GMTVGYMIGSQS 385
Query: 426 -NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
+S S ++Q +++FR G N + ATS+ EEG+DV C++++ FD + +IQ
Sbjct: 386 TSSSAAYMSYREQIVSLQKFRYGETNCLFATSVAEEGIDVPECDVIVRFDLYSSAIQYIQ 445
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMR---------KEVLSHASLPCSP 535
S+GRAR ++S Y+ M++ G+ +L + + +R ++V P
Sbjct: 446 SKGRARQKSSLYISMMEEGNLDHMRKLRRAVRDAHALRQFCSALPEDRKVQDFVITPELL 505
Query: 536 LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG---IC 592
+++ + + + TG T +S+ ++ + S P++ P +I +G I
Sbjct: 506 VSHEQATQKTFAIAETGAQLTFITSLDVLAKFASSFPNEAEDGIMPLEYIVNTVGKKFIA 565
Query: 593 TLYLPNNCPIQTVI--AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDI---VVEKHDA 647
+ LP PI+T+ AQ + + + +A EAC +L Q +T NL P + E +A
Sbjct: 566 RVVLPEGSPIKTITGEAQQSKQLARCSAAFEACVRLIQKKYITGNLQPAFAKKLPEMRNA 625
Query: 648 QKRGNEPYNAEHPIYFPPELVNQ--SPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT 705
+ + +E+ + P+ + P+ Y +I L Q ++R ++L R
Sbjct: 626 RLALSSDKKSEYDMRIKPDFWSSCLGPEPPTSLYQT-VITLDQPDALGRASRPLILLTRK 684
Query: 706 ELESEIKKVNFDLEVERGRLTVNLK---HLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
L +I L GR T N++ +++P+Q+ F + LF +
Sbjct: 685 PL-PDIPSA--PLYFGSGR-TSNVRLSNSQTSFEVLPHQIEALASFTLRLFADVFSKE-- 738
Query: 763 KLNEILDGFELRDNLEIDYLL---LPSTGQL--IDWKTVATVLFPRDNGSKHNMNCSTMF 817
+E + + E+ Y + LP+ ++ IDWK V F +N + + F
Sbjct: 739 --------YEAKTH-ELPYFVAPGLPNDDEVVEIDWKAVQ---FVHENENLEWKDAPEKF 786
Query: 818 NARIVHTKSGPLCTCKIHNSLVCTPHNG-QIYCITGVLGHLNANSLFTRN--NGSVTTYK 874
+ L P +G + Y + G+ + + YK
Sbjct: 787 ----------------FEDKLAIDPWDGSRKYILHGINPDMKPSDPTPEGVPQPKSLAYK 830
Query: 875 K--HYEERYGIQLCF---------DREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFEL 923
+ H + Y L F D +P++N + +N+L + + +
Sbjct: 831 RVEHNIKEYSNSLSFNSRKRINWTDDQPVVNAELLPIRRNFLDEFFVTDDGDGT------ 884
Query: 924 PPELCRIIMAPISLSTFY----SFTFV-PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 978
C II+ P+ +S Y + V P +M+R+ S+L+A +++ +TI +
Sbjct: 885 ----CYIILEPLRVSPIYIDAVAMALVLPVVMYRVDSVLIAQEACSLV------GLTIRS 934
Query: 979 IKVLEAITTK--------KCQEDF------HLESLETLGDSFLKYAASQQLFKTYQNNHE 1024
LEA+T + Q DF + E LE LGD+FLK A + +F + E
Sbjct: 935 DLALEAVTKDSFNTEEHGEHQVDFQPGMGRNYERLEFLGDTFLKMATTISVFTLFPTADE 994
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR 1084
V + ++ N L K E+ +P +IRT++FD + W Y N +L G+
Sbjct: 995 FEYHVTRMVMLCNQNLFKHAVEKGMPAYIRTKAFDRRTW---------YPSNM-TLKRGK 1044
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFL---STGGENVGLIFLDRIGIKVDFVNVPYQRQF 1141
+ + K++ADV EALIGA S G ++ + + + ++ Y+ F
Sbjct: 1045 AAKTESKHCLSHKSIADVCEALIGAAYMSSSPGDMDMAVKAVAAMVCSINHTMTSYKDYF 1104
Query: 1142 -----------QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLE 1190
Q A + + V + + Y F+ L A H SY+ R YQRLE
Sbjct: 1105 ATFTAPKWYSQQATAAQRLTVDKVAEITGYRFKAAPLARSAFRHPSYVFENNIRDYQRLE 1164
Query: 1191 FLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
FLGD +LD I +L+ ++P P +LT+ ++A V+N VK GLHKHIL A+ L
Sbjct: 1165 FLGDGLLDMAIVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSSL 1224
Query: 1251 YKRINITVDSFEKL-------------SLGSTFGWESVTSFPKALGDIIESLAGAIFVDS 1297
I E+ S+ F W V PK L D++E+L GA+FVDS
Sbjct: 1225 LGDIGRYAAQLEQAEETARQTLRAEAESIPQNF-WVDVPQPPKVLADVVEALVGAMFVDS 1283
Query: 1298 GCNREVVF----QSIRPLLEPMITPETMRF-HPVREL-----TEYC---QKNHF-SMKKP 1343
+ VV + I+P E M + HPV L ++C K H S+ P
Sbjct: 1284 EYSFSVVLDFFTKFIQPYFEDMALYSSFASNHPVTTLAHKLEADFCCNQWKLHVASVPAP 1343
Query: 1344 VASRISGKAA--VTVEVQANGRLFEHT 1368
V + I+ +A + + +GR+ H
Sbjct: 1344 VEAGIAVVSASEILCALMIHGRVVAHA 1370
>gi|425772078|gb|EKV10503.1| RNA helicase/RNAse III, putative [Penicillium digitatum Pd1]
gi|425777255|gb|EKV15436.1| RNA helicase/RNAse III, putative [Penicillium digitatum PHI26]
Length = 1372
Score = 332 bits (851), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 356/1350 (26%), Positives = 586/1350 (43%), Gaps = 171/1350 (12%)
Query: 41 FLETGSGKTLIAIMLLRSYAYL-LRKPS----PFVAVFLVPKVVLVPQQAEAIKMHTDLK 95
L+TGSGKTL+A++LL+ + L K + P VA FLV V LV QQ+ ++ + D K
Sbjct: 80 LLDTGSGKTLVAVLLLKHILQMELNKRAHGTKPRVAFFLVDTVTLVFQQSAVLRNNLDQK 139
Query: 96 VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHA 155
V ++G++G D WD TW + + K+ V+V T +IL L + +++ I +LI DE HHA
Sbjct: 140 VAHFFGNLGPDLWDKQTWDKHLEKYMVIVCTAEILNQSLLNGHIRIDQINLLIFDEAHHA 199
Query: 156 RGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNS 215
+ +H +A I+ + Y L+ N PRIFGMTASP+ +K +E LETL++S
Sbjct: 200 KKEHPFARIIRDAY---LKADIENRPRIFGMTASPVDAKCDLAEAAV-----QLETLLDS 251
Query: 216 KVYTCASESVLSNFI--PFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDL 273
++ T + ++L NF+ P + YD++P T+L L T+ + L L
Sbjct: 252 RIATTSDLTLLRNFVNKPMEVE----WVYDKLPPPSETNLHSTLK------TKYGDMLIL 301
Query: 274 NEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGF----GE 329
+ + + ST L VW A E + E D
Sbjct: 302 EGV------FRFASVASTELGGWCADQVWALALADEVLPKLEGSIGKVTDSDPRDSEKAS 355
Query: 330 TIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIR 389
IK+ +AS + Y+ A K L G L E ++ D +
Sbjct: 356 EEIKRI-QEASHLVNEYITDRAFMPSDLSPKLELLMGKLQE----------QFAKSPDTK 404
Query: 390 CIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSGIQC---QSRKKQNEIVEEFR 445
CI+F +R TA V+ L +L +P + + + G G + ++Q ++ +FR
Sbjct: 405 CIVFTQRRNTAKVMLQLCEKLQIP---NLRPEILVGVRKGDAIGMNSTFRRQFLVLAKFR 461
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
+ VN + ATS+ EEGLD+ CNLV+ FD T ++QSRGRAR +S Y MV+ G+
Sbjct: 462 KSEVNCLFATSVAEEGLDIPDCNLVVRFDLYDTFIQYVQSRGRARRADSVYATMVECGNR 521
Query: 506 TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF--------------YHVEST 551
RL+ R E L P + +YG+ Y V T
Sbjct: 522 NHSMRLQEV------RRAEHLMKNFCNLLPEDRKLYGDGHDMGVLVHEENRKRTYTVTRT 575
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGICTLYLPNNCPIQTVIA-- 607
G + T ++ ++ + S L + + + E C + +P P++ V+
Sbjct: 576 GAMLTYRHAIGVLARFASSLQYENEISAKVTYVVMSENESFSCEVIMPEKSPVRRVLGCC 635
Query: 608 QGNIKTLKQAACLEACKKLHQIGALTDNL-------LPDIVVEKHDAQKRGNEPYNAEHP 660
+ KQ+A +AC L + L ++ LP + K + + Y
Sbjct: 636 ESKKSLAKQSAAFDACLLLRKRNLLDEHFNSVYHKRLPAMRNAKLAITSKRTDQYK---- 691
Query: 661 IYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNF---D 717
+ P + + I + LI L + +IVL R ++ + F D
Sbjct: 692 MRTKPSIWARQQGTIPIRLYAILIRLIPSEPLTRAHGSIVLLSREQITAIPTFPVFLDDD 751
Query: 718 LEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNL 777
+E L ++ G +++ ++ + F + +F + ++E + +
Sbjct: 752 IETTVQSLCID----GCLEVASEELEIVTAFTLAVFHDVFHKTYKHVSEQFPYWLVPARE 807
Query: 778 EIDYLLLPSTGQLIDWKTVATVLFPRDNGS---KHNMNCSTMFNARIVHTKSG-----PL 829
+ID + S +IDW + V +DN +M ++ N I +G PL
Sbjct: 808 DIDVGMSTSLFDIIDWTALKYV---QDNPKLVWSTDMEPESLLNRFIYDDWNGKYRYFPL 864
Query: 830 CTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDR 889
N P C +N + ++N+ + + R C
Sbjct: 865 AVDP--NLRPSDPPPSYAPCRKWSDDIMNWSLSLSKNS------RPKFFNR-----CIWT 911
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS------F 943
+P+L + +N+L K +++ S+ C I P+ LST F
Sbjct: 912 QPVLQAELVCLRRNFLDKMADEEKLSNSR---------CVICPQPLVLSTISKSVAATCF 962
Query: 944 TFVPSIMHRLQSLLLA------VNLKNMLLDHCMQNVTIPTIKVLEAITTK-KCQEDF-- 994
F P+I+ R++S L+A + L + L+ ++ +T + E + + Q
Sbjct: 963 VF-PAIITRMESYLIAEEGCKLLGLGGIKLEFALEALTKDSDNTEEHRSLQIHVQRGMGK 1021
Query: 995 HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
+ E LE LGDS LK A S LF ++ E V + +I N L K E KL FIR
Sbjct: 1022 NYERLELLGDSVLKMATSISLFVQNPDDDEYDYHVNRMCLICNKNLFKNATELKLYEFIR 1081
Query: 1055 TESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTG 1114
+ F MW PG S E D + + + G+ + KT+ADV EALIGA L +G
Sbjct: 1082 SRGFSRHMWYPPG---LSLEYGRD---HAKFVDSEGKHSLSEKTIADVCEALIGASLLSG 1135
Query: 1115 GEN--------VGLIFLDRIGIKV----DFVN---VPYQRQFQVHAERLVNVRHLESLLN 1159
G++ +F++ D+++ +P ++ + + + +
Sbjct: 1136 GDDHRYDMAVKAVTVFVNSQKHTATSWKDYISAYSIPLYQKKAADGFEMNLAQQIFEKVG 1195
Query: 1160 YSFRDPSLLVEALTHGSYML--PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
Y F+ P LL A TH SY L ++P CYQRLE+LGDA+LD + +L++++P P +L
Sbjct: 1196 YEFKYPRLLRSAFTHPSYPLTWAKVP-CYQRLEYLGDALLDMVCVEHLFHRFPTRDPQWL 1254
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF---EKLSLGSTFGWES 1274
T+ + A V+N +VK GLH H+ H S+ L + + + E S G W S
Sbjct: 1255 TEHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNSKYAEELQLAESESNGEVNYWLS 1314
Query: 1275 VTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ PK L D++E+ GAIFVDS + V+
Sbjct: 1315 TSDSPKCLPDMLEAYLGAIFVDSSFDFTVI 1344
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 284/988 (28%), Positives = 448/988 (45%), Gaps = 177/988 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVLV 81
R+YQ + E A ++NTI L+TG+GKT+IA+ML+R ++ +FL P V L
Sbjct: 1078 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHL- 1136
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
Q + IK T +V +Y+G GVD W +W++E+S+H+VLVMTPQILLD LR ++ L
Sbjct: 1137 --QFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSL 1194
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+ ++I+DECH A G H Y IM
Sbjct: 1195 XTVCLMIVDECHRATGNHPYTKIM------------------------------------ 1218
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
K+YT + L FIP + +FY + H D A ++
Sbjct: 1219 --------------KIYTIEDRTELEVFIPSAKEINRFYDASQF------HNLDLKAKLK 1258
Query: 262 LKHTRSLENLDLN------------EAQAELIRKKVSKINSTLLYCLSELGVWLALKAA- 308
++ +NL LN + + + +RK++S ++ +LYCL +LG+ A +A
Sbjct: 1259 SSWSK-FDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVK 1317
Query: 309 ---ETISCYESDFFAWEQ---------------LDGFGETIIKKFGSDASQALVTYVPSG 350
E +S + +F + Q + G+ ++ K A L + V
Sbjct: 1318 VCIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHVLHKMSLAAVDELDSLVSEQ 1377
Query: 351 AEWSIGDDSKFNLD-------SGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAI 401
+ G+ F L+ L ++E+L+ + R + C+IFVER+ITA
Sbjct: 1378 QGFFFGEWKTFFLEHKGFERGDPLPPNLFFVVMEALIVFLERVARKVLCLIFVERIITAK 1437
Query: 402 VLQSLLSELLP-RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
V++ + +++ H T Y+ G+NS + + K Q E +E FR G VN++ AT ++EE
Sbjct: 1438 VIERFIKKIIYLSHFT--VSYLTGSNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEE 1495
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNK 520
G+ V +C+ VI FD +TV S++QSRGRAR +S +++M++ G++ + +L + + S
Sbjct: 1496 GIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYS 1555
Query: 521 MRKEVLSHASLPCSPLNNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
M + ++ L + E D Y V+STG T SSVSLI+ YC +LP D YF P
Sbjct: 1556 M-TDTATNRDPDGYTLKAYTIEEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTP 1614
Query: 580 TPKFHINKEMGI--CTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDN 635
P FH G+ C L LP N QT+I GN + KQ CLEACKKLHQ+GAL D+
Sbjct: 1615 KPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDH 1674
Query: 636 LLP--------DIVVE-KHDAQKRGNEPYNAEHPI--------YFPPELVNQSPQDTKIT 678
LLP DI+V+ K A G H + ++ Q KI
Sbjct: 1675 LLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKID 1734
Query: 679 YHCYLI-ELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQL 737
+ C ++ EL F VL + ++L+ ++ + +L + + ++ G++ L
Sbjct: 1735 FSCNIVNELYSGF---------VLLIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSL 1785
Query: 738 IPNQVLLCRRFQITLFRVIMDHNL--DKLNEILDGFELRDNLEI------DYLLLP---- 785
QV+ F F + K + + F L + YLLLP
Sbjct: 1786 DAEQVMKAMXFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKSLWSSSNMYLLLPIESS 1845
Query: 786 ----STGQLIDW------KTVATVLFPRDNGSKHNMN--------CSTMF------NARI 821
I+W +V L R S NMN CST +
Sbjct: 1846 NIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMNDDTGNPSPCSTGLVETECKSIST 1905
Query: 822 VHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR----NNGSVTTYKKHY 877
VH + + + N +V H G+IY I V+ +A S F N+ + TT+ +++
Sbjct: 1906 VHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYF 1965
Query: 878 EERYGIQLCFDREPLLNGRRIFHVQNYL 905
+YGI L + +PLL ++ + N L
Sbjct: 1966 NNKYGIVLMYPGQPLLLLKQSHNAHNLL 1993
>gi|336470988|gb|EGO59149.1| hypothetical protein NEUTE1DRAFT_60268 [Neurospora tetrasperma FGSC
2508]
gi|350292065|gb|EGZ73260.1| hypothetical protein NEUTE2DRAFT_107618 [Neurospora tetrasperma FGSC
2509]
Length = 1583
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 398/1456 (27%), Positives = 609/1456 (41%), Gaps = 273/1456 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR---------SYAYLLRKPSPFVAVF 73
R YQ+E E A +QNTI L+TGSGKTLIA MLLR L R+ +A F
Sbjct: 122 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVINGELEDREKGLPRR----IAFF 177
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LV KV LV QQ + + D + K G+M A WKE + ++EV+V T +IL
Sbjct: 178 LVDKVALVFQQHSFLTKNLDFPMEKLCGEMVEGVESKAFWKEALEQNEVVVCTAEILSTA 237
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L S+ +++ I +LI DE HH + H YA I+ FY ++ PRI G+TASP+ +
Sbjct: 238 LHHSWIRMDQINLLIFDEAHHTKKDHPYARIIKNFY---IDEQLERRPRILGLTASPVDA 294
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
KV D + +LE L++S++ T A + L + I +
Sbjct: 295 KV-----DPRRAAAELEALLHSQIATAADPAALQHTICKPKTEL---------------- 333
Query: 254 ADELAMIELKHTRSLENLDLNE------AQAELIRKKVSKINSTLLYCLSELGVWLA--- 304
++E R LN+ EL +K ++ S S+LG W A
Sbjct: 334 -----IVEYVRGRPDSETVLNKQLRKLVGGQELFKKPLNFTTS----AASKLGTWCADRY 384
Query: 305 ----LKAAETI---SCYESDFFAWEQLDGFGETIIKKFGSDASQALV---TYVPSGAEWS 354
K + + S E D LD E +K+ + LV T+ P+
Sbjct: 385 WQLFFKQEDIVKLESRTERDLMKVAALDEITEKHVKQVRE--AHELVNAHTFSPAA---- 438
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLL----- 407
LD +L+ K++ L+ L + RGV RCIIFV + TA++L LL
Sbjct: 439 --------LDPTMLSSKVIMLVRILRDQFERGVGAQRCIIFVRQRNTAMLLADLLQQPEI 490
Query: 408 --------SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
+E+L T + Y+ N+ I Q +QN I+ +F+ G +N + ATS+ E
Sbjct: 491 KSHIPSIAAEVLVGGGTTGSSYV---NAKINFQ---QQNRIIRKFKLGEINCLFATSVAE 544
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EGLD+ CN+VI FD T+ IQSRGRAR +S Y+ M++ G+ SR+ + +
Sbjct: 545 EGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRPDSRYIQMIEKGNYEHHSRILRAKGAED 604
Query: 520 KMRK--EVLSHASLPCSPLNNHM---------YGEDFYHVESTGTIATLSSSVSLIYFYC 568
+RK E L NHM G+ Y V TG + S+ + +
Sbjct: 605 VLRKFCEALPEDR---KLTGNHMNLDYLLRKEKGKRQYTVPDTGAKLSYMQSLVCLANFT 661
Query: 569 SRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIK--TLKQAACLEACK 624
+ LP +P+++I G C + +P+ PI++ + + ++ K AA E C
Sbjct: 662 ATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGKVHLSKGVAKCAAAFELCL 721
Query: 625 KLHQIGALTDNLLPDIVV----EKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
L + G L DN L + E +A+ + E+ + PEL + T+++
Sbjct: 722 ALLKAGHL-DNHLQSVFTKQLPEMRNARLAVSSKKKTEYAMRLKPELWSVRGVVTQLSAT 780
Query: 681 CYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP- 739
+++E S+R ++L R+ L EV L K R++ +P
Sbjct: 781 AFVLENPDTLGR--SSRPLLLLSRSALP----------EVASFPLFFGTKRFSRVRCVPI 828
Query: 740 ------NQVLLCRRFQITLF--RVIMD----------HNLDKLNEILDGFELRDNLEIDY 781
++ L+ Q+T F + MD NL +DG D+
Sbjct: 829 PGSVQADETLVE---QLTCFTLKAFMDVFSKEYEATAVNLPYFLSPMDG-----GHGFDF 880
Query: 782 LLLPSTGQLIDWKTVA----------TVLFPRDNGSKHNMNCSTMFNARIV---HTKSGP 828
L S LID KT+A T L P D+ + AR H +
Sbjct: 881 RLAKSPAHLIDRKTLAYVSENEKVPYTFLEP-DDFFQDKFVVDPYDGARKFFTHHRRHDM 939
Query: 829 LCTCKIHNSLVCTPHNG--QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLC 886
T + + +V H + +L + +NSL++++ G +
Sbjct: 940 KPTDPVPDGIVAPNHRAWRGLGTTHDILNY--SNSLWSKSRGFMIFQAD----------- 986
Query: 887 FDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFV 946
+P++ I +++L + + EP + L P + ++PI
Sbjct: 987 ---QPVVEAALISTRRDFLDDTLRDEDVEPQQCFLILEP----MRISPIPADVVAMLLCF 1039
Query: 947 PSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFH---------- 995
PSI+HR++S L+A LD C + + + LEA T D H
Sbjct: 1040 PSIIHRVESNLVA-------LDACKLLGLDLRPDLALEAFTKDSDNSDEHDAEKENYQTG 1092
Query: 996 ----LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGDSFLK A + ++ + E V++ +I N L E L
Sbjct: 1093 MGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKNLFNNALEIGLEE 1152
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFL 1111
+IR+ SF+ + W G L G+ R + K++ADV EALIGA
Sbjct: 1153 YIRSMSFNRRQWYPEG----------LILKKGKSKDARQRHVLADKSIADVCEALIGAAY 1202
Query: 1112 STGGEN---------VGLIFLD---RIGIKVDFVNVPYQRQFQVH----AERLVNVRHLE 1155
TG E V + D R+ D+ V + +Q A+R + +
Sbjct: 1203 LTGQEKGSFDLAIKAVTAMVKDKKHRMISYGDYYAVYQKPNWQTDPANSAQRDM-AKKFS 1261
Query: 1156 SLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
L YSF+ P LL A H +Y + +P YQRLEFLGDA+ D + YL+ K+P
Sbjct: 1262 ERLGYSFKHPRLLRAAFQHPTYPSLYERLP-SYQRLEFLGDALFDMVAVDYLFRKFPAAD 1320
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV---------DSFEKL 1264
P +LT+ + A V+N S G +K I S + K I V E +
Sbjct: 1321 PQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSILKDIAEYVAEIEEALEAAKEEAI 1380
Query: 1265 SLGSTFG------WESVT---SFPKALGDIIESLAGAIFVDSGCNREVV---FQS-IRPL 1311
G+T W +T PK L D++E+ GAIFVDS + VV F + + P
Sbjct: 1381 KAGTTADEYSRDYWVHITHASRLPKCLSDVVEAYIGAIFVDSEYDYSVVQNFFNTHVLPF 1440
Query: 1312 LEPMITPETM-RFHPV 1326
E M +T HPV
Sbjct: 1441 FEDMHLYDTFANKHPV 1456
>gi|85105148|ref|XP_961898.1| hypothetical protein NCU08270 [Neurospora crassa OR74A]
gi|74616659|sp|Q7S8J7.1|DCL1_NEUCR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl-1; Includes: RecName:
Full=ATP-dependent helicase dcl-1
gi|28923482|gb|EAA32662.1| predicted protein [Neurospora crassa OR74A]
Length = 1584
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 381/1416 (26%), Positives = 587/1416 (41%), Gaps = 242/1416 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR---------SYAYLLRKPSPFVAVF 73
R YQ+E E A +QNTI L+TGSGKTLIA MLLR L R+ +A F
Sbjct: 123 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVITGELEDREKGLPRR----IAFF 178
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LV KV LV QQ + + D + K G+M A WKE + ++EV+V T +IL
Sbjct: 179 LVDKVALVFQQHSFLTKNLDFPMEKLCGEMVEGVESKAFWKEALEQNEVVVCTAEILSTA 238
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L S+ +++ I +LI DE HH + H YA I+ FY ++ PRI G+TASP+ +
Sbjct: 239 LHHSWIRMDQINLLIFDEAHHTKKDHPYARIIKNFY---IDEQLERRPRILGLTASPVDA 295
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
KV D + +LE L++S++ T A + L + I +
Sbjct: 296 KV-----DPRRAAAELEALLHSQIATAADPAALQHTICKPKTEL---------------- 334
Query: 254 ADELAMIELKHTRSLENLDLNE------AQAELIRKKVSKINSTLLYCLSELGVWLA--- 304
++E R LN+ EL +K ++ S S+LG W A
Sbjct: 335 -----VVEYVRGRPDSETVLNKQLRKLVGGQELFKKPLNFTTS----AASKLGTWCADRY 385
Query: 305 ----LKAAETI---SCYESDFFAWEQLDGFGETIIKKFGSDASQALV---TYVPSGAEWS 354
K + + S E D LD E +K+ + LV T+ P+
Sbjct: 386 WQLFFKQEDIVKLESRTERDLMKVAALDEITEKHVKQVRE--AHELVNAHTFSPAA---- 439
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLL----- 407
LD +L+ K++ L+ L + RGV RCIIFV + TA++L LL
Sbjct: 440 --------LDPTMLSSKVIMLVRILRDQFERGVGAQRCIIFVRQRNTAMLLADLLQQPEI 491
Query: 408 --------SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
+E+L T + Y+ N+ I Q +QN I+ +F+ G +N + ATS+ E
Sbjct: 492 KSHIPSIAAEVLVGGGTTGSSYV---NAKINFQ---QQNRIIRKFKLGEINCLFATSVAE 545
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EGLD+ CN+VI FD T+ IQSRGRAR +S Y+ M++ G+ SR+ + +
Sbjct: 546 EGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRPDSRYIQMIEKGNYEHHSRILRAKGAED 605
Query: 520 KMRK--EVLSHASLPCSPLNNHM---------YGEDFYHVESTGTIATLSSSVSLIYFYC 568
+RK E L NHM G+ Y V TG + S+ + +
Sbjct: 606 VLRKFCEALPEDR---KLTGNHMNLDYLLRKEKGKRQYTVPDTGAKLSYMQSLVCLANFT 662
Query: 569 SRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIK--TLKQAACLEACK 624
+ LP +P+++I G C + +P+ PI++ + + ++ K AA E C
Sbjct: 663 ATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGKVHLSKGVAKCAAAFELCL 722
Query: 625 KLHQIGALTDNLLPDIVV----EKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
L + G L DN L + E +A+ + E+ + PEL + T++
Sbjct: 723 ALLKAGHL-DNHLQSVFTKQLPEMRNARLAVSSKKKTEYAMRLKPELWSVRGVVTQLFAT 781
Query: 681 CYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPN 740
+++E S+R ++L R+ L E+ +R + G +Q
Sbjct: 782 AFVLENPDTLGR--SSRPLLLLSRSAL-PEVASFPLFFGTKRFSKVRCVPIPGSVQADDT 838
Query: 741 QVLLCRRFQITLFRVIMDH-------NLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDW 793
V RF + F + NL +DG D+ L S LID
Sbjct: 839 LVEQLTRFTLKAFMDVFSKEYEATAVNLPYFLSPMDG-----GHGFDFRLAKSPAHLIDR 893
Query: 794 KTVA----------TVLFPRDNGSKHNMNCSTMFNARIV---HTKSGPLCTCKIHNSLVC 840
K +A T L P D+ + AR H + T + + +V
Sbjct: 894 KALAYVSENEKVPYTFLEP-DDFFQDKFVVDPYDGARKFFTHHRRHDMKPTDPVPDGIVA 952
Query: 841 TPHNG--QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRI 898
H + +L + +NSL++++ G + +P++ I
Sbjct: 953 PNHRAWRGLGTTHDILNY--SNSLWSKSRGFMIFQAD--------------QPVVEAALI 996
Query: 899 FHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
+++L + + EP + L P + ++PI PSI+HR++S L+
Sbjct: 997 STRRDFLDDTLRDEDVEPQQCFLILEP----MRISPIPADVVAMLLCFPSIIHRVESNLV 1052
Query: 959 AVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFH--------------LESLETLG 1003
A LD C + + + LEA T D H E LE LG
Sbjct: 1053 A-------LDACKLLGLDLRPDLALEAFTKDSDNSDEHDAEKENFQTGMGDNYERLEFLG 1105
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DSFLK A + ++ + E V++ +I N L E L +IR+ SF+ + W
Sbjct: 1106 DSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQW 1165
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN------ 1117
G L G+ R + K++ADV EALIGA TG E
Sbjct: 1166 YPEG----------LILKKGKSKDARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDMA 1215
Query: 1118 ---VGLIFLD---RIGIKVDFVNVPYQRQFQVHAERLVN---VRHLESLLNYSFRDPSLL 1168
V + D R+ D+ V + +Q + + + Y F+ P LL
Sbjct: 1216 IKAVTAMVKDKKHRMISYGDYYAVYQKPTWQTESANSAQRDMAKKFSERMGYKFKHPRLL 1275
Query: 1169 VEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN 1226
A H +Y + +P YQRLEFLGDA+ D + YL+ K+P P +LT+ + A V+
Sbjct: 1276 RAAFQHPTYPSLYERLP-SYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVS 1334
Query: 1227 NDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK---------LSLGSTFG------ 1271
N S G +K I S + K I V E+ ++ G T
Sbjct: 1335 NQFLCCLSFHLGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEAINAGKTADEYSRDY 1394
Query: 1272 WESVT---SFPKALGDIIESLAGAIFVDSGCNREVV 1304
W +T PK L D++E+ GAIFVDS + VV
Sbjct: 1395 WVHITHASRLPKCLSDVVEAYIGAIFVDSEYDYSVV 1430
>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
Length = 1543
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 221/613 (36%), Positives = 327/613 (53%), Gaps = 83/613 (13%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + + A + F R G + ++Y +Y+++YG++L F ++PL
Sbjct: 851 IVTAAHSGKRFYVDSIRYDMTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELMFKQQPL 910
Query: 893 LNGRRIFHVQNYLS---KCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFT 944
+ GR + + +N LS + + E +I + LPPELC ++ P+ S
Sbjct: 911 IRGRGVSYCKNLLSPRFEHSDSNEGESEEILDKTYYVFLPPELC--LVHPLPGSLVRGAQ 968
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLA+ LK+++ + ++P +K+LEA+T CQE F E E LGD
Sbjct: 969 RLPSIMRRVESMLLAIQLKDII------HYSVPALKILEALTAASCQETFCYERAELLGD 1022
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 1023 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALIKGLQSYIQADRFAPSRWA 1082
Query: 1065 IPG-----DNSGSYELNDDSLFNGRKIYVTGRKKV------------------------- 1094
PG D + D SLF+ K + + KV
Sbjct: 1083 APGVLPVFDED--TKDGDSSLFDQEKSLIENKPKVDHADDGYEDDEIEDGELESDSSSYR 1140
Query: 1095 --KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-----------VNVPYQRQF 1141
SKT+ADVVEALIG + GG+ + IGIKV+F NVP
Sbjct: 1141 VLSSKTLADVVEALIGIYYVEGGKTAANHLMRWIGIKVEFDHEEIDSAIRPSNVPES--- 1197
Query: 1142 QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 1201
R ++ LE LN F+D LLVEA+TH S + CYQRLEF+GDAVLD+LI
Sbjct: 1198 ---ILRSIDFDALEGALNIKFQDRGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLI 1253
Query: 1202 TVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV--- 1258
T +L+ Y L PG LTD+R+A+VNN+ +A +V H LH H+ H S L K+I V
Sbjct: 1254 TRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVNHKLHVHLRHGSSALEKQIRDFVREV 1313
Query: 1259 -DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
D K S FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+T
Sbjct: 1314 QDELSKPGFNS-FGLGDCKA-PKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVT 1371
Query: 1318 PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTA 1377
PET+ HPVREL E CQ+ ++ A+R SG A TVEV +G + + KK A
Sbjct: 1372 PETLPMHPVRELQERCQQQAEGLEYK-ATR-SGNLA-TVEVFIDG-VQVGVAQNPQKKMA 1427
Query: 1378 KKVACKEVLKSLR 1390
+K+A + L L+
Sbjct: 1428 QKLAARNALVILK 1440
Score = 285 bits (730), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 230/767 (29%), Positives = 356/767 (46%), Gaps = 126/767 (16%)
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH L+ P +FGMTASP+ K SS+
Sbjct: 1 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTLK---EKRPSVFGMTASPVNLKGVSSQV 57
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA------ 254
D KI +LE+ ++S V T L +P + Y +L+ +
Sbjct: 58 DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEKIKQMEVAV 117
Query: 255 -------------------DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
D A EL+ + ++ A LI +K+ IN Y
Sbjct: 118 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI-QKLRAIN----YA 172
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKKF------------------ 335
L ELG W A K A++ + +SD A QLD F E+ ++K
Sbjct: 173 LGELGQWCAYKVAQSFLMALQSDERANYQLDVKFQESYLEKVVSLLQCQLTEGAVTDKDT 232
Query: 336 ------------GSDASQALVTYVPSGAEWSIGDDSKFNLDS----GLLTEKIVCLIESL 379
GSD +P S G+ + + G +T K+ L++ L
Sbjct: 233 KSPENENGVAQAGSDPDDIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKIL 292
Query: 380 LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNE 439
L+Y+ ED R IIFVERV+ A+VL + +EL P + + G+N+ + ++ + Q+
Sbjct: 293 LKYQHTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFVRCASLIGHNNSQEMRTSQMQDT 351
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
I + FR G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM
Sbjct: 352 IAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 410
Query: 500 VKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----FYHVESTGTI 554
V+ G+ + + L N S +R+E + L + + D Y VESTG I
Sbjct: 411 VERGNLSHGAFLRNARNSEETLRREAIERTDLSHLKDTSRLISVDSVPGTVYQVESTGAI 470
Query: 555 ATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIA 607
+L+S+V LI+FYCS+LPSD Y P+F + + C L LP+N P + +
Sbjct: 471 VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPSNVPFEKLEG 530
Query: 608 Q--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHP 660
+++ +QA CL ACKKLH++GA TD LLPD + Q N+ P A H
Sbjct: 531 PLCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREQVDQNDEGEPLPGTARHR 590
Query: 661 IYFPPELVN-----------QSPQDTKITYHCYLIEL--------KQHFNYDISARNIVL 701
++P + N ++ H Y+ + K F +S ++
Sbjct: 591 EFYPEGVANILQGEWILCGRDGWNNSNKLLHLYMYAVKCVNSGASKDPFLTQVSEFAVLF 650
Query: 702 AMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
EL++E+ ++ DL + R +T +L G I + NQ+ + F + L +++D +
Sbjct: 651 G--NELDAEVLSMSMDLFIARTIITKASLVFRGPIDITENQLASLKSFHVRLMSIVLDVD 708
Query: 761 LDKLNEILDGFELRDNLEIDYLLLPSTG-------QLIDWKTVATVL 800
++ D + YL +P G + IDW V V+
Sbjct: 709 VEPSTTPWDPAKA-------YLFVPMVGDKFVNPIKEIDWDLVENVI 748
>gi|224068194|ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa]
Length = 1817
Score = 325 bits (834), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 324/603 (53%), Gaps = 64/603 (10%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + + A F R G + ++Y +Y+++YG++L F ++PL
Sbjct: 1171 IVTAAHSGKRFYVDSICYDMTAEISFPRKEGYLGPLEYSSYADYYKQKYGVELKFKQQPL 1230
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFEL--------PPELCRIIMAPISLSTFYSFT 944
L GR + + +N LS + L PPELC ++ P+ S
Sbjct: 1231 LRGRGVSYCKNLLSPRFEHSDSNEGDAEENLDKTYYVFLPPELC--LVHPLPGSLVRGAQ 1288
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLAV LK+++ N +P K+LEA+T CQE F E E LGD
Sbjct: 1289 RLPSIMRRVESMLLAVELKDII------NYPVPASKILEALTAASCQETFCYERAELLGD 1342
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 1343 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFAPSRWA 1402
Query: 1065 IPG-------------------------DNSGSYELND---DSLFNGR-KIYVTGRKKVK 1095
PG D +G L+D + + +G + + + +
Sbjct: 1403 APGVLPVFDEETKDGDSYIFDQEKSLAEDRTGMNHLDDGYENEIEDGELESDASSYRVLS 1462
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ---RQFQVHAE--RLVN 1150
SKT+ADVVEALIG + GG+N + IGI+V+F + R F V R V+
Sbjct: 1463 SKTLADVVEALIGVYYVEGGKNAVNHLMKWIGIQVEFDHEEIDGASRPFNVPESVLRSVD 1522
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
LE L+ F D LL+EA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 1523 FDTLEGALDIKFNDRGLLIEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYT 1581
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG--- 1267
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L K+I V + L
Sbjct: 1582 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEKQIRDFVREVQDELLKPVF 1641
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
++FG + PK LGDI+ES+AGAIF+DSG + VV++ +PLL PM+TPET+ HPVR
Sbjct: 1642 NSFGLGDCKA-PKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVR 1700
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
EL E CQ+ ++ A+R SG A TVEV +G + + KK A+K+A + L
Sbjct: 1701 ELQERCQQQAEGLEYK-ATR-SGNLA-TVEVFIDG-VQVGVAQNPQKKMAQKLAARNALV 1756
Query: 1388 SLR 1390
L+
Sbjct: 1757 VLK 1759
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 220/444 (49%), Gaps = 71/444 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY-LLRKPSPFVAVFLVPKVVL 80
AR YQL+ L+ A K+NTI FLETG+GKTLIA++L+RS L R+ +AVFLVPKV L
Sbjct: 288 ARQYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKILAVFLVPKVPL 347
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQAE I+ +VG Y G+MG DFWD W+ E +VLVMT QILL+ LR S K
Sbjct: 348 VYQQAEVIR-ERGYQVGHYCGEMGQDFWDTRRWQREFETKQVLVMTAQILLNILRHSIIK 406
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ I +LILDECHHA KH Y+ +M+EFYH T P +FGMTASP+ K SS+
Sbjct: 407 MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKRPSVFGMTASPVNLKGVSSQV 463
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-----------KYDEIPHAL 249
D KI +LE+ ++S V T L +P Y + +I A+
Sbjct: 464 DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPAEVVVEYDKAASLWSLHEQIKQIEAAV 523
Query: 250 --------------YTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+ D A EL+ + ++ A LI +K+ IN Y
Sbjct: 524 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI-QKLRAIN----YA 578
Query: 296 LSELGVWLALKAAET-ISCYESDFFAWEQLD-GFGETIIKK--------FGSDASQALVT 345
L +LG W A K A++ ++ ++D A QLD F E+ +++ A T
Sbjct: 579 LGDLGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLERVVLLLQCQLTEGAVTDKDT 638
Query: 346 YVPSGAEWSIGDDSKFN--------------------------LDSGLLTEKIVCLIESL 379
V +I D F+ + G +T K+ LI+ L
Sbjct: 639 KVSDNGNDNIQDGPGFDEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKVL 698
Query: 380 LEYRGVEDIRCIIFVERVITAIVL 403
L Y+ ED R IIFVERV+ A+VL
Sbjct: 699 LRYQHTEDFRAIIFVERVVAALVL 722
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 165/368 (44%), Gaps = 60/368 (16%)
Query: 477 RTVCSFI--QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
R V + + +SRGRAR SDY+LMV+ G+ + + L N S +RKE + L
Sbjct: 715 RVVAALVLPKSRGRARKPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHL 774
Query: 535 PLNNHMYGED-----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+ + D Y VESTG + +L+S+V L++FYCS+LPSD Y P F + K
Sbjct: 775 KDTSRLIAVDSIPGTVYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPGFIMEKHE 834
Query: 590 G-------ICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV 642
C L LP N P + + A CL ACKKLH++GA TD LLPD
Sbjct: 835 KPGGPTEYSCKLQLPCNAPFEELEG--------PAVCLAACKKLHEMGAFTDMLLPDKGS 886
Query: 643 EKHDAQKRGNE-----PYNAEHPIYFPPELVNQSPQDTKI-----------TYHCYLIEL 686
E+ + N+ P A H ++ PE V ++ Q I H YL +
Sbjct: 887 EEEKDKVDQNDEGEPLPGTARHREFY-PEGVAKTLQGEWILCGRDGCNNSKVLHLYLYGV 945
Query: 687 K------QHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIP 739
+ + + N + EL++E+ ++ DL + R +T +L GRI +
Sbjct: 946 RCLNIGTSNDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTMITKASLVFRGRIPITE 1005
Query: 740 NQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTG-------QLID 792
+Q+ + F + L +++D +++ D + YL +P + ID
Sbjct: 1006 SQLASLKNFHVRLMSIVLDVDVEPSTTPWDPAKA-------YLFVPMVSDKSVDPIKEID 1058
Query: 793 WKTVATVL 800
W V ++
Sbjct: 1059 WDLVENII 1066
>gi|336270596|ref|XP_003350057.1| hypothetical protein SMAC_00946 [Sordaria macrospora k-hell]
gi|380095449|emb|CCC06922.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1586
Score = 325 bits (834), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 382/1434 (26%), Positives = 595/1434 (41%), Gaps = 252/1434 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPSPF---VAVFLVPK 77
R YQ+E E A +QNTI L+TGSGKTLIA MLLR L + F +A FLV K
Sbjct: 123 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVINGELEDREKGFPRRIAFFLVDK 182
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ + + D + K G+M A WKE + +EV+V T +IL L S
Sbjct: 183 VALVFQQHSFLTKNLDFPMEKLCGEMMEGVESKAFWKEALEHNEVVVCTAEILNTALHHS 242
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ +++ I +LI DE HH + H YA I+ FY ++ PRI G+TASP+ + V
Sbjct: 243 WIRMDQINLLIFDEAHHTKKDHPYARIIKNFY---VDEKLERRPRILGLTASPVDANV-- 297
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D + +LE L++S++ T A + L I A+
Sbjct: 298 ---DPGRAAAELEALLHSQIATAADPASLQPKICRPKAEL-------------------- 334
Query: 258 AMIELKHTRSLENLDLNE------AQAELIRKKVSKINSTLLYCLSELGVW-------LA 304
++E R LN+ EL +K V+ S S LG W L
Sbjct: 335 -LVEYARGRPDSETALNKQLRKLVGGQELFKKPVNFTTS----AASTLGPWCVDRYWQLY 389
Query: 305 LKAAETISC---YESDFFAWEQLDGFGETIIKKFGSDASQALV--TYVPSGAEWSIGDDS 359
K + + E D L E +K+ DA + + T++P+
Sbjct: 390 FKQEDIVKLEARTERDLMKASALGEITEKNVKQV-RDAHELVNAHTFLPAA--------- 439
Query: 360 KFNLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLL---------- 407
LD + ++K++ L+ L + GV RCI+FV + TA++L LL
Sbjct: 440 ---LDPAMFSDKVIMLVRILRDQFETGVGTQRCIVFVRQRNTAMLLADLLQQPGIKSHIP 496
Query: 408 ---SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
+E+L T + Y+ N+ + Q +QN I+ +F+ G +N + ATS+ EEGLD+
Sbjct: 497 SIVAEVLVGGGTTGSGYV---NAKVNFQ---QQNRIIRKFKLGEINCLFATSVAEEGLDI 550
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD----------STTQSRLENY 514
CN+VI FD T+ +IQSRGRAR +S Y+ M++ G+ + L N+
Sbjct: 551 PDCNIVIRFDLYDTLIQYIQSRGRARRPDSRYIQMIEKGNPEHYTKIVQAKKAEDTLRNF 610
Query: 515 LASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD 574
+ + RK +H +L L G+ Y V TG + S+ + + + LP
Sbjct: 611 CKALPEDRKLTDNHMNL--DYLLRKEKGKRQYTVPETGAKLSYMQSLICLANFTATLPHP 668
Query: 575 GYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIK--TLKQAACLEACKKLHQIG 630
+P+++I G C + +P+ PI++ + + ++ K AA E C L + G
Sbjct: 669 PETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGKIHVSKGAAKCAAAFELCLALLKAG 728
Query: 631 ALTDNLLPDIVV----EKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIEL 686
L DN L + E +A+ + E+ + PEL + + T++ + +E
Sbjct: 729 HL-DNHLQSVFTKQLPEMRNARLAVSSKKKTEYAMRLKPELWSVRGEVTQLYATAFFLE- 786
Query: 687 KQHFNYDI---SARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQ-- 741
N D S+R ++L R+ L EV L K +++ +P Q
Sbjct: 787 ----NPDARGRSSRPLLLLSRSGLP----------EVASFPLFFGTKRFSKVRCVPIQGS 832
Query: 742 -------VLLCRRFQITLFRVIMDHNLDKLNEILDGF--ELRDNLEIDYLLLPSTGQLID 792
V RF + F + + L F + D+ L S LID
Sbjct: 833 VEAEDTLVEQLTRFTMKAFMDVFSKEYEATAADLPYFLSPMDGGHGFDFRLAKSPADLID 892
Query: 793 WKTVATVL--------------FPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSL 838
KT+A V F +D + + F R H + T + + +
Sbjct: 893 RKTLAYVSGNEKVPYTFLEPDEFFQDKFIVDPYDGARKFFTR--HRRHDMKPTDPVPDGI 950
Query: 839 VCTPHNG--QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGR 896
V H + +L + +NSL+ ++ G + +P++ R
Sbjct: 951 VQPNHRAWKGLGTTHDILNY--SNSLWAKSRGFMVFQAD--------------QPVVEAR 994
Query: 897 RIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
I +++L + EP L P + ++PI PSI+HR++S
Sbjct: 995 LISTRRDFLDDAILDEDLEPQPCFLALEP----LRISPIPADVAAMLLCFPSIIHRVESN 1050
Query: 957 LLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFH--------------LESLET 1001
L+A LD C + + + LEA T + H E LE
Sbjct: 1051 LVA-------LDACKLLGLDLRPDLALEAFTKDSDNSNEHDVEQVNFQTGMGDNYERLEF 1103
Query: 1002 LGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPK 1061
LGDSFLK A + ++ + E V++ +I N L E L +IR+ SF+ +
Sbjct: 1104 LGDSFLKMATTMSIYTLIPDKGEFEYHVERMLLICNKNLLNNALEVGLEEYIRSMSFNRR 1163
Query: 1062 MWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN---- 1117
W G L G+ R + K++ADV EALIGA TG E
Sbjct: 1164 QWYPEG----------LVLKKGKNKDARTRHVLADKSIADVCEALIGAAYLTGQEKGSFD 1213
Query: 1118 -----VGLIFLD---RIGIKVDFVNVPYQRQFQV----HAERLVNVRHLESLLNYSFRDP 1165
V + D R+ D+ V + +Q A+R + + E + Y F+ P
Sbjct: 1214 MAIKAVTAMVRDKKHRMMNYGDYYAVYQKPSWQTAPANSAQRDMADKFSER-MGYKFKHP 1272
Query: 1166 SLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSA 1223
LL A H +Y + +P YQRLEFLGDA+ D + YL+ K+P P +LT+ + A
Sbjct: 1273 RLLRAAFQHPTYPSLYERLP-SYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMA 1331
Query: 1224 SVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK---------LSLG------S 1268
V+N S G +K + S + K I V E+ ++ G S
Sbjct: 1332 MVSNQFLCCLSYHLGFYKCVATMSPSILKDIAEYVTEIEEALEAAKQEAVNQGKAPEEYS 1391
Query: 1269 TFGWESVT---SFPKALGDIIESLAGAIFVDSGCNREVVFQ----SIRPLLEPM 1315
W +T PK L D++E+ GAIFVDS + VV Q + P E M
Sbjct: 1392 RDYWVHITHVSRLPKCLSDVVEAYIGAIFVDSEYDYSVVQQFFTTHVLPFFEDM 1445
>gi|389740167|gb|EIM81358.1| P-loop containing nucleoside triphosphate hydrolase protein [Stereum
hirsutum FP-91666 SS1]
Length = 1537
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 392/1529 (25%), Positives = 645/1529 (42%), Gaps = 250/1529 (16%)
Query: 19 LPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKV 78
LP R YQ E L+ +L N ++ L+TG+GKT IA++ +R + + K + V FL P V
Sbjct: 10 LPKTRGYQQEMLDESLNNNIVIALDTGAGKTHIAVLRMR---HEVEKETTKVCWFLTPTV 66
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLS 137
L QQ I+ H + V G + D W D W ++ H ++V T +LL+ LR
Sbjct: 67 ALCYQQRSVIQSHLHVPVAMISGALEPDQWKDPNLWSRTLATHRIVVSTHDVLLNALRHG 126
Query: 138 YFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRL--LETGDSNL-PRIFGMTASPIKS 193
Y L I +++ DE HHA KH Y IM EFY L ++ GD N+ PR+ G+TASP+
Sbjct: 127 YIHLGRHISLVVFDEAHHAADKHPYNRIMQEFYFELPKVDRGDGNVRPRVLGLTASPVFG 186
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
E+ + + +L+ + + V A+ S L+ + +FK Y+E + +
Sbjct: 187 --GDIERAFLKLEANLDCTIRAPV---ANRSELATHV--HRPEFKHVIYEEPEYMMGYGE 239
Query: 254 ADELAMIELKHTRSLENLDLNEA------QAELIR-----------KKVSK-INSTLLYC 295
A +++ L+ +E+LD+ + QAEL R +++SK IN Y
Sbjct: 240 APSASVVSLQSV--VESLDIRQDPYVLGLQAELARLPPGPDRSRTDQRLSKTINRQDSY- 296
Query: 296 LSELGVWLALKAAETI----SCYESDFF-------AWEQLDGFGETIIKKFGSDASQALV 344
+ G+ +AA+ I + +D++ AW+ + G + Q L+
Sbjct: 297 -THKGMRDFFRAADEICSDLGAWAADWYVQTVLEQAWDTMKGPVPEFAGALNNREKQYLM 355
Query: 345 TYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV-----EDIRCIIFVERVIT 399
+ + D + + ++K+ LIE+LL + V E+ +IFV R
Sbjct: 356 GALSRVQATPVSYDPEEIVRRS--SDKVKKLIETLLHEKEVFESYDEEYHGLIFVTRRDA 413
Query: 400 AIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK-------------QNEIVEEFRR 446
I L SE+L H K + G G+ S +K + + +F+
Sbjct: 414 VIAL----SEILENHPETKDVFRTGALLGMSENSARKAFLDITRNMLKQSNEDTLRDFKV 469
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM-----VK 501
G +N+IVAT++ EEGLDVQ+CN V+ +DP + S+ QSRGRAR Q S ++LM V
Sbjct: 470 GDLNLIVATAVAEEGLDVQACNNVVRWDPPMNMVSWAQSRGRARRQRSSFVLMFSTASVH 529
Query: 502 SGDSTTQSRLENYLASGNKMRKE--VLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
+ D LE + M ++ A N Y + Y+ E TG TL S
Sbjct: 530 AKDVQGWEYLEQEMVRMYNMERQRREEDEAGEEDEEDGNEEYVKPLYN-EKTGAKITLDS 588
Query: 560 SVSLIYFYCSRLPSDGYFKP-TPKFHINKEMGICTLY------LPNNCPI---------- 602
+++ + +C+ LP G +P + IN + LP P
Sbjct: 589 AITHLNHFCAILPGGGGLGSHSPIYDINPPEFPSEWHAQPIALLPYAGPFGATVTLPKLL 648
Query: 603 -------QTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPY 655
T + G ++ EA K LH G L D+LLP + V + + + +
Sbjct: 649 DRRFRVFSTPVIHGRKSYARRRVAFEAYKALHDAGLLNDHLLPLMSVLEPELEDEVKKLL 708
Query: 656 NAEHPIYFPPELVNQSPQDTKITYHC--YLIELKQHFNYDISARNIVLAMRTELESEIKK 713
+ V++ T++T + +E Q SA IV + T + K
Sbjct: 709 SE----------VDKRDGVTRVTKQLDPWNLEPGQEPACWYSAELIVHGLPTLRMFTLTK 758
Query: 714 VNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL 773
++ E E L + L +++IP+ + + +D ++ + E F L
Sbjct: 759 ISTLREDEMPLLYTHDGSLFPVRVIPSDTRI----------LPLDSDIVRAREFTKTFLL 808
Query: 774 --------RDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK 825
D+ + YL LPS WKT L+ + + + FN +
Sbjct: 809 PLYGNRMNADDDKFAYLFLPSDASAPAWKTQ---LWAQRRATCESEPKPYGFNFPL---- 861
Query: 826 SGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK-------KHYE 878
L PH+ + G + F R S T + ++
Sbjct: 862 ---LAHADWFGKHYDYPHD---IGMVGEMRKYGRAHRFLRWKMSRVTEEEAEELTLRYAP 915
Query: 879 ERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQ--KEPSKISFELPPELCRIIMAPIS 936
E +++ + PL+ + + N+L+ + + S+ S L PE + +
Sbjct: 916 EGGELEITY---PLIVAKALPSRVNFLAPLPEDSKGAAAASQRSILLLPEFSTVALTSF- 971
Query: 937 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHL 996
+ T Y+ ++PSI+ L + +++ LL + IP + A+T+ Q +
Sbjct: 972 VETQYAL-WMPSILRYLSITMTVCAMRDDLLLGSPRLSAIPLKLLTTAVTSGVAQMGMNY 1030
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
+ LETLGD+ LK+ S L Y HEG L+ +K+ +SNA L K E+KL +I +
Sbjct: 1031 QRLETLGDTVLKFVTSLNLLSEYPFWHEGYLARRKDHAVSNAQLAKAAYEKKLFKYIIRD 1090
Query: 1057 SFDPKMW---------IIPGDNSGSYELNDDSLF-----------NGRKIYVTGRKKVKS 1096
F P+ W + P ++ + + D + +K + ++ +
Sbjct: 1091 MFAPRKWRPTYIGGAKVEPPSDAKAEDPEDMAPTVVKRPQKGPSEAKKKQRAKAQGEIST 1150
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRH--- 1153
K +ADVVEALIGA G ++ + + G+ + +P + + R++ +
Sbjct: 1151 KVLADVVEALIGAAYIHGSFDLAVECIKVFGLGLSCEWLPIAARIEPMLSRVIELEFFPT 1210
Query: 1154 ----LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+E++L Y+F +LLVEALTH SY Y+R+EFLGDAVLD L+T YLY+
Sbjct: 1211 QLSAVENILGYTFERKALLVEALTHASYQTDLGTISYERMEFLGDAVLDMLVTDYLYHA- 1269
Query: 1210 PG--LSPGYLTDMRSASVNND-----CYALS---------------SVKHG--------- 1238
PG P L ++A VN C S S + G
Sbjct: 1270 PGKDYKPAELHLRKTAVVNGHFLGFICLRASTFISTEMPTKVNNPNSRRRGNAFLIQLEQ 1329
Query: 1239 ------LHKHILHASHELYKRINITVDSFEKLSLGS----------TFGWESVTSF--PK 1280
L K +LH++ ++ + + FEK G F W ++T PK
Sbjct: 1330 QQERLYLSKCLLHSNSKVLELQSNAFARFEKTDGGEHIERSLLEDPIFPWAALTWLEAPK 1389
Query: 1281 ALGDIIESLAGAIFVDSGCNREVVFQSIRPL-----LEPMITPETMRFHPVRELTEYCQK 1335
L D++ESL GAIF+DS N +VV +R L LE ++ + HPV L E+ K
Sbjct: 1390 FLSDMVESLIGAIFLDSKGNWDVVRDVLRLLGIWEVLERIVRDDVEVKHPVSRLAEWAAK 1449
Query: 1336 NHFSMKKPVASRISGKAAVTVEVQANGRL 1364
+ I + +E Q NGR+
Sbjct: 1450 QEKE------TGIETEVKYVIE-QGNGRI 1471
>gi|302772092|ref|XP_002969464.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
gi|300162940|gb|EFJ29552.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
Length = 1255
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 280/918 (30%), Positives = 415/918 (45%), Gaps = 180/918 (19%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVLVP 82
+YQLE LE LK+NTIVFLETG+GKT IA ML A L P + VFL P V L
Sbjct: 1 SYQLEVLEKVLKENTIVFLETGAGKTHIAAMLFNKLADRLSMPEEKRIGVFLTPTVALAD 60
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA I T LKVG Y G +D WD W EE+ H+VLVMT Q+L + L+LS ++
Sbjct: 61 QQANVISSSTRLKVGVYHGGQ-MDTWDVRKWSEEIDSHQVLVMTAQVLFNSLQLSAIRME 119
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
MI+VLI DECH A+ H YA +M
Sbjct: 120 MIEVLIFDECHRAQNNHPYASVM------------------------------------- 142
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL------YTHLADE 256
K+YT S + L +P T ++ YD+ H T L D+
Sbjct: 143 -------------KIYTITSRAELEEKVP--TPFYRNLYYDKAHHCFKELRRCLTDLLDK 187
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI--SCY 314
+ +I LD N+ R K S + + + L +LG+W A+ I SC+
Sbjct: 188 VNVIIY--------LDENKK-----RSKFSNLYNAITSSLLDLGLWSAVLVKNYIFFSCF 234
Query: 315 ESDFF--AWEQL------------DGFGETIIKKFGSDASQALVTYVPSGAEWSIG--DD 358
+ A E L D ++F +A L ++VP + SI +D
Sbjct: 235 GLTYVLQAVEVLLKIDPEGTKPPVDNEDTNDEQRFLKEAYNILKSFVPGDSVSSISSPED 294
Query: 359 SKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+K ++SGLLT K+ L++ L+ YR VE RC+IFVERV+ V Q
Sbjct: 295 AKKAVNSGLLTSKVKALLKILVRYRNVEPFRCMIFVERVV---VTQ-------------- 337
Query: 419 TKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+NV++ TS+ EEGLDVQSCN V+ FD RT
Sbjct: 338 ------------------------------LNVLICTSVAEEGLDVQSCNCVVRFDICRT 367
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS--LPCSPL 536
+ SFIQSRGRAR +++ Y+ +++ G+ +S L + S MR E LS S + +PL
Sbjct: 368 LRSFIQSRGRARKRDATYMFLLERGNLEQESLLMELVNSEELMRAEALSRMSKTIEITPL 427
Query: 537 NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMG 590
+ DF++ S I+T +VS IY YCS+LP D Y+ P P+ + N+E+
Sbjct: 428 IDA--DLDFFYTTSGACIST-DGAVSFIYRYCSQLPGDRYYNPKPEIEVTKCESDNEELF 484
Query: 591 ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQ 648
CT+ P N P+ + + N + K+ ACLEAC++L +GAL + P++ EK ++
Sbjct: 485 SCTITFPPNAPLHVLTGPPKRNKQLAKKVACLEACRQLDALGALGERHPPEVREEKMASE 544
Query: 649 KRG------NEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLA 702
G E + + + + + S T I H Y + N + N L
Sbjct: 545 GPGLGSTKLKELFPSIKSTTYQRQWITTS---TDIILHIYALIFHPEENGS-TYTNFGLL 600
Query: 703 MRTELESEIKKVNFDLEVERGR-LTVNLKHLGRIQLIPNQVLLCRRFQITLF-----RVI 756
L+ ++ + +L + + R + L G+ ++ Q+ + +Q +F R++
Sbjct: 601 FDAALDDDVGNIEVNLYLTKNRAVKAKLSSAGQRRVDSVQLAAAKAYQEIMFNGAFSRLV 660
Query: 757 M--DHNLDKLNE-ILDGFELRDNLEID-YLLLP--STGQLIDWKTV-----ATVLFPRDN 805
D N L +L E + L + YLLLP IDW V A L P
Sbjct: 661 FREDKNDRTLATCLLSSTEKANELWSETYLLLPILDGSCDIDWNIVTRCADAAKLLPSLC 720
Query: 806 GSKHNMN-CSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFT 864
+ C +A +++T SGP+ + +++V T H G+++ I VL L A S F
Sbjct: 721 SELNKTEVCMERPDAGLIYTASGPVSPGALQDAVVLTVHTGKLFSIVEVLEDLGAQSTFK 780
Query: 865 RNNGS-VTTYKKHYEERY 881
N S TY++ Y +Y
Sbjct: 781 ENEESEPCTYEEFYLRKY 798
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 253/441 (57%), Gaps = 38/441 (8%)
Query: 980 KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
++LEA T+ +CQ+ F E LE LGDS LKYA +++L+ + HEG LS ++ I N+
Sbjct: 814 QILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNST 873
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIPG-------------DNSGSYELND----DSLFN 1082
L KL Q LP ++R E F P W+ G DN + E + D+ +
Sbjct: 874 LRKLAVAQDLPMYVRDEPFYPSYWVGAGMYRQRSRKCCCRLDNLVTKESSKPRPTDATYY 933
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN-------- 1134
K G + + SKT +D +EALIGA+ GG + L F+ + + VDF +
Sbjct: 934 VGKTCGQGHRWMCSKTTSDALEALIGAYTVGGGFDGALEFMKALQVDVDFDSGLIAASQH 993
Query: 1135 --VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
VP Q H L++ LE L Y+F++ +LL+EA+TH S P+ CYQRLEF+
Sbjct: 994 RPVPLD-AVQFHMPALLS---LEKELCYTFQNKALLLEAITHAS--TPDTVFCYQRLEFI 1047
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDAVLD+L+T +L+ +PGLSPG L+D+RSASVNNDC A +VKH LH ++ H S EL
Sbjct: 1048 GDAVLDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAELRA 1107
Query: 1253 RINITVDSFEKLSLGST-FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
+IN +D ++ S FG+++++ PKAL DI+ES+AGAI VDSG + E ++ ++ L
Sbjct: 1108 KINSFLDVLDRDPECSVMFGFKALSG-PKALADIVESVAGAILVDSGFDFEKLWVVLKRL 1166
Query: 1312 LEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLD 1371
L P +TP T+ FHPVRE E C + + +S SG A + ++A + F
Sbjct: 1167 LSPFVTPATLSFHPVREFHELCSYKSWEFEWVQSS--SG-ATAEILLKAGEQRFTEVSSI 1223
Query: 1372 ADKKTAKKVACKEVLKSLRAS 1392
+KK A+K +++L L+ +
Sbjct: 1224 KNKKDARKDVAEKLLTMLKVN 1244
>gi|403179645|ref|XP_003337958.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165150|gb|EFP93539.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 372/1410 (26%), Positives = 601/1410 (42%), Gaps = 239/1410 (16%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFL 74
D + R YQ E LE A K+N I+ +TG+GKT++A+ L+ A + + + FL
Sbjct: 16 DLIKIPRLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAVKTKAKNKNHQIQAFL 75
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
VP L QQAE I+ H L++ Y GD+ + W+ W E+++ +VLV T QI D +
Sbjct: 76 VPTRPLAHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNEVDVLVSTAQIFYDLI 135
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS- 193
Y+KL + +LI DE HH R H Y IM YHRL + LP+I G+TASPI +
Sbjct: 136 SKGYWKLEDVSLLIFDEAHHCRKNHVYNQIMRSHYHRLAKDSTVRLPKILGLTASPIWNF 195
Query: 194 -KVSSSEQDYWQKIHDLETLMNSKVYTCA--SESVLS-NFIPFSTAKF--KFYKYDEIPH 247
+ +E D I L++ + +++Y +E V NF P + + ++PH
Sbjct: 196 KDLEKAESD----IKSLQSALAAQIYEVKKHTEDVCRHNFKPNEQVVYFEPAPDFQQLPH 251
Query: 248 ALYTHLADELAM-IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
+ + L++ K ++E++ L+ T Y L+ L W LK
Sbjct: 252 PPWDQINKLLSLHASPKMIAAVESVSLDLG--------------TYAYSLAVLD-W--LK 294
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
+ TI G + + + Q + + E + D ++
Sbjct: 295 SLLTIG-------------GSNQLMSGRLVDPNYQERIQSLIKEVEKLVDID---DIPEN 338
Query: 367 LLTEKIVCLIESLLEYRGVED---IRCIIFVERVITAIVLQSLLSELLPRHCTWK----- 418
L+ K++ L + L+ Y+ +D CI+FVER A LL LL R+ K
Sbjct: 339 QLSSKVIALYKILVNYKEKDDHNNFLCIVFVERRQHA----QLLPILLERNVQLKDFLRP 394
Query: 419 ---TKYIAGNNS---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
T + +GN + GI+ SR QN V +FR G N+ +ATS+ EEGLD +SC +VI
Sbjct: 395 AALTGHGSGNENDLIGIKMDSR-TQNRTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIR 453
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
FD T +IQSRGRAR + SDY++M+ +G + YLA K + + P
Sbjct: 454 FDLITTWKGYIQSRGRARARESDYIVMLPTGTAN------KYLAFSGKEEQLKAALYDRP 507
Query: 533 CSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK 587
L E + + +I T S++ SL+ C +P D + +
Sbjct: 508 QDELIEDGEEESTPQLICQLADGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPEYEMM 567
Query: 588 EMG---ICTLYLPNNCPIQ------TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
E+G C + LP + T + G K++A EACK L ++G L ++ LP
Sbjct: 568 ELGERFKCRVTLPPMAALPPSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLP 627
Query: 639 ---DIVVEKHDAQKR-------------------GNEPYNAE---HPIYFPPELVNQSPQ 673
D + DA R G+ ++E H + FP + SP
Sbjct: 628 QREDKAAQVRDADGREIETTQLADKVEAIISNIYGDFRTSSEVWLHKLSFP----DDSPA 683
Query: 674 DTKI-----TYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVN 728
H + + Q F++D +R + + ++ KKV E E+ N
Sbjct: 684 GFSTMGLLCARHLTIPDDLQLFDHDPVSRPLSVKIKHS-----KKV----EWEQDDAPFN 734
Query: 729 LKHLGRIQLIPNQVLLCRR-FQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST 787
L+ L R L+ QV + R+ ++ L+ ++ L D +E
Sbjct: 735 LQRLERFTLLVMQVAVNRKPYEGKLYFLVAPL-------------LNDAIE--------- 772
Query: 788 GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNA-----RIVHT--KSGPLCTCKIHNSLVC 840
IDW V T + P + + T+ + RI T +G LC + +
Sbjct: 773 ---IDWNLVDTPMIPLSEAADSSRYQCTIVPSRRPRFRIFDTCESAGDLCAASPPSRVPA 829
Query: 841 TPHNGQIYCITGV----LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGR 896
P + Q +C LGH Y+ Y ++ + + +
Sbjct: 830 CP-SMQHFCKKIAKFHNLGHF-------------------YKTCYDLEDEHLKGDFVYLQ 869
Query: 897 RIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
F V N L Q LP +LC+ P ++ + F+++PS+ L
Sbjct: 870 TTFQVYNNL---LQSVSTLAHPYRTLLPLKLCQGTHIPRTI--WKVFSYLPSLTRLLHDS 924
Query: 957 LLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
+ A L M LD M +P + ++A+T + ++LET+GD+FLK A S ++
Sbjct: 925 IQATAL-FMRLDFPM--TLLP--RGIQALTPPGVGVPWDYQTLETVGDAFLKLATSVHVY 979
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELN 1076
++ EG +S + + + N L + + LP I + F + G
Sbjct: 980 LSHLRKGEGDMSHVRSKSVDNDYLRRKAIQANLPSSILGQRFRTDRFRDAQTEDGK---- 1035
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV--- 1133
L NG + V + ++DVVEAL+GA TGG +GL +IG +D
Sbjct: 1036 --ELPNG-----NFSRNVPRRVLSDVVEALLGAGFLTGGIELGL----KIGTALDLCFGG 1084
Query: 1134 NVPY-QRQFQVHAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYML 1179
P+ +R + E L+ + LE + Y F++ LLV+ALTH S+M
Sbjct: 1085 TTPWNERTLNIAFEGTAHDKLASSILLKCQALEEKIGYVFKEKLLLVQALTHRSANSFMT 1144
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-G 1238
CY+R E+LGDAV+D I + Y ++ + LT R+ V+N ++K G
Sbjct: 1145 ----NCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLARAKLVSNGSLGFLAIKKLG 1200
Query: 1239 LHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSF-----PKALGDIIESLAGAI 1293
LHK I+H S + + + E + F F PK L D++E++ GA+
Sbjct: 1201 LHKVIMHKSESFEQACVEAIKAIEPFTSIEEFFSNLENLFVVFDPPKILNDVLEAIVGAV 1260
Query: 1294 FVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
F+DS + V+++I + E +TP R
Sbjct: 1261 FIDSRFDLPTVYRTIDKIFED-VTPGLSRI 1289
>gi|302800610|ref|XP_002982062.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
gi|300150078|gb|EFJ16730.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
Length = 497
Score = 321 bits (823), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 297/537 (55%), Gaps = 44/537 (8%)
Query: 37 NTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKV 96
NTIV LETG GKT+IA++L+RS ++L RKP + VFL P V L QQAE I+ +TDL V
Sbjct: 2 NTIVCLETGCGKTMIAVLLIRSLSHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLYV 61
Query: 97 GKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHAR 156
G Y G G D W + K EV VMTP ILLD LR +F + +++LI DECHH
Sbjct: 62 GTYVG--GTSTMDVHWWTTHLQKQEVFVMTPAILLDNLRHRFFNPDHVELLIFDECHHCA 119
Query: 157 GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI--KSKVSSSEQDYWQKIHDLETLMN 214
H YA IM+EFYH+ ++ PRI GMTASPI K K S Q + + LET++
Sbjct: 120 KGHPYANIMSEFYHK----PEAKCPRILGMTASPIVGKGKTWSGPQAFKESFDCLETMLR 175
Query: 215 SKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLN 274
SK+ T A + L++F+P S K K + +P H ++ ENL
Sbjct: 176 SKIITFADKE-LTSFLPSSDMKIK----EHLPDTKGKHRTTDI-------DNRFENLT-R 222
Query: 275 EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKK 334
E + R+ V+KI +TL YCL ELG++ A KAAE + DG G
Sbjct: 223 EFRLPEERQAVNKIYNTLNYCLFELGLFSARKAAEIM---------LAGCDGKGR----- 268
Query: 335 FGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV 394
DA A + V + E D + ++ K+ L++ L EY+ +D+RCI+FV
Sbjct: 269 ---DAEAAFLRRVLNILEEKAILDGTADDQIRAISSKVQLLLDVLDEYKSAQDLRCIVFV 325
Query: 395 ERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVA 454
ERVI A VL LL+ + + +A + + ++ + Q +E+FR G NVIVA
Sbjct: 326 ERVIAAKVLTLLLNS----RPYVRAQCVASHRNKLKGLTLATQRNSLEDFRAGKANVIVA 381
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
T++ EEGLD+QSC+LVI F+ +T S IQSRGRAR Q SDY+++++SG+ + +L +
Sbjct: 382 TNVAEEGLDIQSCSLVIRFNMPKTERSSIQSRGRARKQGSDYVILMESGN-LNEEKLLHA 440
Query: 515 LASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRL 571
+ G K+ E L H +D YHVESTG + + SSVSL++ YCS L
Sbjct: 441 ILEGEKLMHEQL-HTVQDTYDHQLFYRQKDAYHVESTGAVVNIDSSVSLLHQYCSTL 496
>gi|302766077|ref|XP_002966459.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
gi|300165879|gb|EFJ32486.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
Length = 497
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 214/537 (39%), Positives = 296/537 (55%), Gaps = 44/537 (8%)
Query: 37 NTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKV 96
NTIV LETG GKT+IA++L+RS ++L RKP + VFL P V L QQAE I+ +TDL V
Sbjct: 2 NTIVCLETGCGKTMIAVLLIRSLSHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLYV 61
Query: 97 GKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHAR 156
G Y G G D W + K EV VMTP ILLD LR +F + +++LI DECHH
Sbjct: 62 GTYVG--GTSTMDVHWWTTHLQKQEVFVMTPAILLDNLRHRFFNPDHVELLIFDECHHCA 119
Query: 157 GKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI--KSKVSSSEQDYWQKIHDLETLMN 214
H YA IM+EFYH+ ++ PRI GMTASPI K K S Q + + LET++
Sbjct: 120 KGHPYANIMSEFYHK----PEAKCPRILGMTASPIVGKGKTWSGPQAFKESFDCLETMLR 175
Query: 215 SKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLN 274
SK+ T A E L++F+P S K K Y +P H ++ ENL
Sbjct: 176 SKIITFADEE-LTSFLPSSDMKIKEY----LPDTKGKHRTTDI-------DNRFENLTRE 223
Query: 275 EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKK 334
E R+ V+KI +TL YCL ELG++ A KAAE + DG G
Sbjct: 224 FGLPEE-RQAVNKIYNTLNYCLFELGLFSARKAAEIM---------LAGCDGKGR----- 268
Query: 335 FGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV 394
DA A + V + E D + ++ K+ L++ L EY+ +D+RCI+FV
Sbjct: 269 ---DAEAAFLRRVLNILEEKAILDGTADDQIRAISSKVQLLLDVLDEYKSAQDLRCIVFV 325
Query: 395 ERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVA 454
ERVI A VL LL+ + + +A + + ++ + Q +E+FR G NVIVA
Sbjct: 326 ERVIAAKVLTLLLNS----RPYVRAQCVASHRNKLKGLTLATQRNSLEDFRAGKANVIVA 381
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
T++ EEGLD+QSC+LVI F+ +T S IQSRGRAR Q SDY+++++SG+ + +L +
Sbjct: 382 TNVAEEGLDIQSCSLVIRFNMPKTERSSIQSRGRARKQGSDYVILMESGN-LNEEKLLHA 440
Query: 515 LASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRL 571
+ G K+ L H+ +D YHVESTG + + SSVSL++ YCS L
Sbjct: 441 ILEGEKLMHGQL-HSVQDTYEHQLFYLQKDAYHVESTGAVVNIDSSVSLLHQYCSTL 496
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 320 bits (821), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 211/604 (34%), Positives = 327/604 (54%), Gaps = 67/604 (11%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSV-----TTYKKHYEERYGIQLCFDREPL 892
+V H+G+ + + + ++NA + F R G + +++ +Y+++YG++L + ++PL
Sbjct: 614 VVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPLEYSSFADYYKQKYGVELVYKKQPL 673
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKIS--------FELPPELCRIIMAPISLSTFYSFT 944
+ R + + +N LS + + + S LPPELC ++ P+ S
Sbjct: 674 IRARGVSYCKNLLSPRFEHSEASNGEFSENLDKTYYVYLPPELC--LVHPLPGSLVRGAQ 731
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM R++S+LLA+ LK+++ +P K+LEA+T CQE F E E LGD
Sbjct: 732 RLPSIMRRVESMLLAIQLKDII------GYPVPANKILEALTAASCQETFCYERAELLGD 785
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+ + F P W
Sbjct: 786 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMILYQYALNKNLQSYIQADRFAPSRWA 845
Query: 1065 IPG-------------------DNSGSYELN----DDSLFNGRKIYVTGR--------KK 1093
PG + + S EL DD ++G + G +
Sbjct: 846 APGVLPVFDEETRDSEPSIFDEEFTPSSELQKNLYDD--YDGDSMQEDGEIEGDSSCYRV 903
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNVPYQRQFQVHAE--RLV 1149
+ SKT+ADVVEALIG + GG+ + IGI ++D +P + + + + +
Sbjct: 904 LSSKTLADVVEALIGVYYVAGGKIATNHLMKWIGINAELDPQEIPSSKPYNIPESIIKSI 963
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
N LE L F++ LLVEA+TH S + CYQRLEF+GDAVLD+LIT +L+ Y
Sbjct: 964 NFDTLEGALGIKFQNKGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLFFTY 1022
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV-DSFEKLSLG- 1267
L PG LTD+R+A+VNN+ +A +VKH LH H+ H S L +I V D E+LS
Sbjct: 1023 TDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELSKPG 1082
Query: 1268 -STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
++FG + PK LGDI ES+AGAIF+DSGC VV++ +PLL+PM+TP+T+ HPV
Sbjct: 1083 FNSFGLGDCKA-PKVLGDIFESIAGAIFLDSGCATSVVWKVFQPLLDPMVTPDTLPMHPV 1141
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVL 1386
REL E CQ+ ++ ASR A TVEV +G + + KK A+K+A + L
Sbjct: 1142 RELQERCQQQAEGLEYK-ASRTGNVA--TVEVLVDG-IQIGVAQNPQKKMAQKLAARNAL 1197
Query: 1387 KSLR 1390
L+
Sbjct: 1198 VVLK 1201
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 254/481 (52%), Gaps = 59/481 (12%)
Query: 366 GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
G +T ++ LI+ LL+Y+ ED R IIFVERV+TA+VL + +EL P + + G+
Sbjct: 45 GKVTPRVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKVFAEL-PSLGFIRCASLIGH 103
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
N+ + +S + Q+ I + FR G V ++VATS+ EEGLD++ CN+VI FD ++TV ++IQS
Sbjct: 104 NNNQEMRSCQMQDTITK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 162
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP-------CSPLNN 538
RGRAR SDY+LM++ G+ + ++ L N S +RKE + L SP++
Sbjct: 163 RGRARKPGSDYILMLERGNMSHEAFLRNARNSEETLRKEAIERTDLSHLDGTSMLSPVD- 221
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-------I 591
+ + Y VESTG + +L+S+V L++FYCS+LPSD Y P+F + K
Sbjct: 222 -ISPDSMYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMQKHEKPGGSTEYS 280
Query: 592 CTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQK 649
C L LP N P + + +I+ +QA CL ACKKLH++GA TD LLPD + + +
Sbjct: 281 CKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDMLLPDRGSGEGEKTE 340
Query: 650 RGNE----PYNAEHPIYFPPELVN--------------QSPQDTKI---TYHCYLIEL-K 687
+ +E P A H +FP + QS Q K+ + +C I K
Sbjct: 341 QNDEGDPLPGTARHREFFPEGVAEILHGEWILSGRDGYQSSQFIKLYLYSVNCVNIGTSK 400
Query: 688 QHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCR 746
F +S N L EL++E+ DL V R +T +L G I++ +Q++L +
Sbjct: 401 DPFVTQLS--NFALIFGNELDAEVLSTTMDLFVARTIITKASLVFRGPIEITESQLILLK 458
Query: 747 RFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQL-------IDWKTVATV 799
F + L +++D ++D D + YL +P + IDW V ++
Sbjct: 459 SFHVRLMSIVLDVDVDPSTTPWDPAKA-------YLFVPVGAEKCMDLLREIDWTLVNSI 511
Query: 800 L 800
+
Sbjct: 512 V 512
>gi|367022572|ref|XP_003660571.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
gi|347007838|gb|AEO55326.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
Length = 1604
Score = 316 bits (809), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 377/1450 (26%), Positives = 591/1450 (40%), Gaps = 236/1450 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR--------SYAYLLRKPSPFVAVFL 74
R+YQLE E A +NTI L+TGSGKTLIA +LLR S + L K +A FL
Sbjct: 135 RDYQLELFELAKTRNTIAVLDTGSGKTLIAALLLRWTIQNELESRSSGLPK---RIAFFL 191
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V KV LV QQ + + D + K+ GDM V+ W++ ++ +V T IL L
Sbjct: 192 VDKVALVFQQHAVLTCNLDYPIEKFCGDM-VENVSEDFWRKAFDENMAIVCTADILYQCL 250
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKS 193
SY +++ + +L+ DE HH + H YA I+ +FY + D N PRI GMTASP+ +
Sbjct: 251 SHSYVRMDQVNLLVFDEAHHTKKNHPYARIIKDFY---TDVKDENKRPRILGMTASPVDA 307
Query: 194 ----KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK---FYKYDEIP 246
KV+++E LE L++S++ T A +VL N S+AK K +YD+ P
Sbjct: 308 QTDPKVAAAE---------LEGLLHSQIATVADPTVLHN----SSAKPKHEVVAEYDKRP 354
Query: 247 HALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
T L L +SL DL + R+ + ++ +ELG W A +
Sbjct: 355 PDWETELNQAL--------KSLVG-DLR-----VFRRPFAFTDT----AAAELGPWCADR 396
Query: 307 ----------AAETISCYESDFFAWEQLD-GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
A + S E + F+ D G G + K + T+ A SI
Sbjct: 397 YWQLFFEEGEAVKLESRAEMEAFSQSTYDQGVGHPVDKVREAHNLVKRHTF----ARPSI 452
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLE--YRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
G+L+ K+V L+ L E YR RCI+FV + T +L LL + +
Sbjct: 453 ----------GVLSSKVVLLLRILREQFYRANHRRRCIVFVRQRNTVSLLADLLQQPEMK 502
Query: 414 HCTWKTKYIAGNNS-----GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
+ G G + + Q + +F++G +N I ATS+ EEGLD+ CN
Sbjct: 503 IPGLVPGLLVGGGHPDASYGNAKVTYRDQVRTIYKFKKGELNCIFATSVAEEGLDIPDCN 562
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK---EV 525
+I FD + T+ +IQSRGRAR + S Y+ MV+SG+ + +L S + +RK +
Sbjct: 563 AIIRFDLNDTLIQYIQSRGRARQEGSVYIHMVESGNLEHRRKLAQNQQSEDALRKFCEAM 622
Query: 526 LSHASLPCSPLNNHMY-----GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
L + N + G+ Y V TG S+ + + + LP T
Sbjct: 623 PEDRKLTGNNFNMDYFLRKEKGQRQYTVPETGAKLNYRQSLVFLAAFVASLPHPPGVSLT 682
Query: 581 PKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTD 634
+ + G C + LP++ PI+ A G + K +A E C KL + L
Sbjct: 683 ADYLVLPVPGGFQCEVTLPDSSPIRN--ATGKVHESKAVAKCSAAYEMCLKLIKANYLDQ 740
Query: 635 NLLPDIVVEKH---------DAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIE 685
+L P + H A+K+G YN + PE+ S + + +
Sbjct: 741 HLRPTFTKQLHAMRNARLAVSAKKKGR--YN----MRVKPEI--WSAVGEPVELYALALT 792
Query: 686 LKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLC 745
L + ++L R ++ EI R + G ++L Q+
Sbjct: 793 LSDPTVLGRPSSPLLLLTRQPVQ-EIPSFPLYFGSNRFSAVRCVPVPGSLELDDRQIQGL 851
Query: 746 RRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQ--LIDWKTVATVLFPR 803
F + +F+ + + L F LE + G ++DW AT+ F R
Sbjct: 852 AAFTLAVFKDVFSKEYEATVAQLPYFIAPTKLEHSSGFTAADGPSCVVDW---ATISFVR 908
Query: 804 DNGS-KHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCI------------ 850
+N ++ + F + VC P++G
Sbjct: 909 ENEHIRYTFDELDDF----------------FRDKYVCDPYDGSRKFFLRRRRHDLRPTD 952
Query: 851 ---TGVLGHLNANSLFTRNNGSVTTYK-KHYEERYGIQLCFDREPLLNGRRIFHVQNYLS 906
GV+ + N + Y + G + +P++ + +N+L
Sbjct: 953 PVPEGVVAPGHRAWRVPGGNRDILNYSLSAWRRSRGSMTLREDQPVVEAELLPIRRNFLD 1012
Query: 907 KCRQQKQKEPSKISFELPPELCRIIMAPIS-LSTFYSFTFVPSIMHRLQSLLLAVNLKNM 965
+ EP L P RI P+ ++ Y+F PSIMHR+ S L+A+
Sbjct: 1013 DNIRDDDLEPKPCFLVLEP--LRISPLPVDVVAMVYTF---PSIMHRIDSNLVALEACKK 1067
Query: 966 LLDHCMQNVTIPTIKVLEAITTKKCQEDFHL--------ESLETLGDSFLKYAASQQLFK 1017
L + ++ + T + E H E LE LGD FLK A + +F
Sbjct: 1068 LGLNIRPDLALEAFTKDSDNTDENDAEKIHFQGGMGSNYERLEFLGDCFLKMATTISIFT 1127
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELND 1077
+ E +++ ++ N L E KL +IR+ +FD + W G
Sbjct: 1128 LLPDKDESEYHIERMLLVCNRNLFNKALEVKLEEYIRSTAFDRRSWYPEG---------- 1177
Query: 1078 DSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN-----------VGLIFLDR- 1125
+L G++ V G+ ++ KT+ADV EALIGA T + V ++ DR
Sbjct: 1178 LTLKRGKRRDVDGKHQLADKTIADVCEALIGAAYLTAQDRSPSDFDLAVRAVTVMVRDRN 1237
Query: 1126 --IGIKVDFVNVPYQRQFQV---HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--M 1178
+ D+ ++Q ++ + Y+FR P LL A H +Y
Sbjct: 1238 HAMSSYGDYYAAYRPAKWQTVPCSPAQIDMAARFRERMGYAFRHPRLLRSAFQHPAYPTF 1297
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHG 1238
+P YQRLEFLGDA+LD +L+ ++PG P +LT+ + A V+N A +V G
Sbjct: 1298 YEGLP-SYQRLEFLGDALLDMACVEFLFRRFPGADPQWLTEHKMAMVSNQFLACLAVYLG 1356
Query: 1239 LHKHILHASHELYKRINITVDSFE-----------------------------KLSLGST 1269
HK I+H S ++ + V E + +
Sbjct: 1357 FHKSIVHCSSQVQSEVAGFVAEVEGELRAAKEGTEEGEEGEEEEEEKKERGGEEEAFARD 1416
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRPLLEPMITPETM-RFH 1324
F PK L D++E+ GA+FVDSG + R +RP E M + R H
Sbjct: 1417 FWVRCARRPPKCLADVVEAYVGAVFVDSGYDFGEVRRFFADHVRPFFEDMRPYDAFARKH 1476
Query: 1325 PVRELTEYCQ 1334
PV L Q
Sbjct: 1477 PVTALAAVLQ 1486
>gi|346318518|gb|EGX88121.1| RNase3 domain protein [Cordyceps militaris CM01]
Length = 1455
Score = 313 bits (803), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 346/1422 (24%), Positives = 585/1422 (41%), Gaps = 236/1422 (16%)
Query: 8 SDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP- 66
S+T E+SA + R YQ E E A K+NTIV L+TGSGKTLIAIMLLR ++L +
Sbjct: 50 SETAAEISA-LMITPREYQNELFERAKKKNTIVVLDTGSGKTLIAIMLLR---HVLEQEL 105
Query: 67 -------SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK 119
A F+V KV L QQ + +K + + K +GD+ + W E K
Sbjct: 106 EDRSNGCHRKTAFFIVDKVALCVQQYQVVKSNLPFPITKCYGDLQPIEQVQSHWDELFDK 165
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN 179
+ ++V T Q+LLD L + + I +LI DE HHA+ +H YA IM +Y R D
Sbjct: 166 NMIVVCTAQMLLDCLSHGFINMKQINLLIFDEVHHAKKEHPYAAIMKRYYPR----NDDA 221
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPF-STAKFK 238
PRI G+TASPI + D + LE+L+ S++ T + E + + ++ K
Sbjct: 222 KPRILGLTASPI----DTGTLDMDASVQQLESLLCSEIATVSDEVLEAGWVKREQQEKVC 277
Query: 239 FYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSE 298
FY+ + YT EL + + R + L S+ ++C ++
Sbjct: 278 FYQPPQPIQNAYT----ELTAMVADYARHIPQL------------------SSAVHCAAK 315
Query: 299 ----LGVWLALKAAE-----------TISCYESD--FFAWEQLDGFGETIIKKFGSDASQ 341
LG W A + + T+ S+ +F++++ D + G +
Sbjct: 316 MGSVLGPWCAHRFWQLLMTDNTMRTMTLQSARSNRVYFSYDRYDAVSAA-FESLGPLVNH 374
Query: 342 ALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITA 400
+T +P+ D G + K+ L E+L + + +C++FV+ A
Sbjct: 375 HQLTTLPT--------------DEGATSSKLTVLRETLCVAFEKNRATKCLVFVDEQYVA 420
Query: 401 IVLQSLLSELLPRHCTWKTKYIAG--NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
+VL + ++ G S S+++Q + F+ G N + ATS+
Sbjct: 421 LVLADYFQQPGTAPSGMVADFMIGLSRASAFSNVSQRQQIMKLNNFKFGDTNCLFATSVA 480
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
EEGLD+ +C+LVI FD + +IQSRGRAR +S ++ M++ ++ SR +N
Sbjct: 481 EEGLDIPACDLVIRFDMCVSAIQYIQSRGRARKASSVFITMMEQDNNQHMSRFQNVNIDA 540
Query: 519 NKMRKEVLSHASLPCS--------PLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSR 570
+R+ SLP P ++ V T T++ +S V L F S
Sbjct: 541 LSLRRFC---QSLPADRKIEKYERPPERELF------VAETSTLSNQNSMVVLARF-VST 590
Query: 571 LPSDGYFKPTPKFHINKEMGI-----CTLYLPNNCPIQTVIAQGNIKTLKQ--AACLEAC 623
L P P++ ++ G+ C + LP++ P ++ +K AA EAC
Sbjct: 591 LGQGTEKSPAPEYVVS---GVGTNFTCWVILPDSAPFKSTSGSMERSKIKARCAAAYEAC 647
Query: 624 KKLHQIGALTDNLLPDI---VVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
+L +G++ NL P + + +A+ + ++ + P++ P +
Sbjct: 648 TRLIDLGSINKNLQPTFRKKLPKMRNARLALRDKKQKQYDMVIKPKVWTSLPAEIPTQLF 707
Query: 681 CYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPN 740
I++ + D + + + E +I+ + + ++ ++ L G +++
Sbjct: 708 QTFIQV----HPDSAGITTMTLLTREKLPDIEPIRLFVTIDL-TMSATLVPGGVVEVSAE 762
Query: 741 QVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQL-------IDW 793
QV F + LF + D E EI + L P++ L +DW
Sbjct: 763 QVQQLAAFTLCLFGQVFSKQFDARAE-----------EIPFYLAPASVSLHGPEKCAVDW 811
Query: 794 KTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQ----IYC 849
+ V + + R K + + V PH+G IY
Sbjct: 812 RRVEHTVLSKK---------------RDPEVKPQDM----MRQQFVVDPHDGSRKFFIYE 852
Query: 850 I-----------TGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDRE-PLLNGRR 897
I G+ H N + ++ S+ Y ++ + ++ FD E P+
Sbjct: 853 IVPTLRATDPAPAGIPDHKNPG--YQLSDKSIMQYSCSTKQPHRQKIVFDTEQPVYRALL 910
Query: 898 IFHVQNYL--SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
+ +N+L K+ +P ++ + + ++PI + +PSI++ +
Sbjct: 911 LSLRRNFLRSDDVEAAKEDQPCYLTLQC------LKISPIPADVARAALLLPSILYFVDC 964
Query: 956 LLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQED--------------FHLESLET 1001
L+ ML + IP +L+A T D + E LE
Sbjct: 965 TLVVGEALQML------GLNIPLPLLLQAFTKNGVDADDEEDVKADEEHGGQRNYERLEF 1018
Query: 1002 LGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPK 1061
LGD+FLK + ++ N E V + ++ N L K + L +IR+ESF+ +
Sbjct: 1019 LGDTFLKMGTTIAMYTHKTNATEFEHHVDRMLMLCNKNLLKTALDLGLHTYIRSESFNRR 1078
Query: 1062 MWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI 1121
W L +G+ + + + KT+ADV EA+IGA +G + +
Sbjct: 1079 TW-----------YPSLRLVHGKPTKASAIQNLGDKTIADVCEAIIGAAYMSGVPDGNMD 1127
Query: 1122 FLDRIGIKV------------DF---VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPS 1166
+ K+ D+ +VP A V + L+ Y FR P
Sbjct: 1128 EAVKAVTKMVADPNHTMQCFADYYAGFSVPAWHASSGSASVRAAVDRVAGLIGYRFRSPL 1187
Query: 1167 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN 1226
LL A TH SY EIP YQ LEFLGDA+LD I +L+ +P P +LT+ + +
Sbjct: 1188 LLRSAFTHPSYKAEEIPD-YQTLEFLGDALLDMAIVDHLFRAHPDAGPQWLTEHKMGVCS 1246
Query: 1227 NDCYALSSVKHGLHKHILHAS-------HELYKRINITVDSFEKLSLG-----STFGWES 1274
N V GL + +L A +R+ D+ E + S W
Sbjct: 1247 NQFLGYLCVSLGLQREVLAADAAVPGQIRSFEERLAYLKDAAETAAAQQGRPVSKGYWTL 1306
Query: 1275 VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
T PK L D++E+L GA+FVD+ + VV + + P I
Sbjct: 1307 ATRPPKVLADVVEALIGAMFVDARYDYAVVQRFFEAFVRPHI 1348
>gi|357129053|ref|XP_003566182.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1806
Score = 313 bits (803), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 233/751 (31%), Positives = 367/751 (48%), Gaps = 74/751 (9%)
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
+ VL + T +E+E ++ +L + + ++ G ++L Q+ + FQ +F +
Sbjct: 914 DFVLLIDTTIENEAANLDINLYLHDKMVKASVSPCGLLELDVQQMEKAKLFQALIFNGLF 973
Query: 758 ------DHNLDKLNEIL---DGFELRDNLEIDYLLLPSTGQL-------IDWKTV----A 797
+ + E + D + +N + YLLLP L I+W+ +
Sbjct: 974 GKLFTGSKSSNSPREFILNKDDSLIWNNANM-YLLLPMDPTLESHDSFCINWRLIDEAAT 1032
Query: 798 TVLFPRDNGSKHNMNCSTMFN-----ARIVHTKSGPLCTCKIH---NSLVCTPHNGQIYC 849
V R S MN + + ++H + +C+ H N V H G+IY
Sbjct: 1033 AVGLMRKVHSDDKMNLLAILDIDQNDGDLIHLAN---TSCEAHVLRNVAVLAVHTGKIYT 1089
Query: 850 ITGVLGHLNANSLFT----RNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL 905
V L++NS F + T+K+++E++YGI L +PLL + + N L
Sbjct: 1090 SLHVT-DLSSNSTFDGVSDKKETGFKTFKEYFEKKYGIVLRHPSQPLLVLKPSHNPHNLL 1148
Query: 906 SKCRQQKQKEPSKIS--FELPPELCRIIMAPISL--STFYSFTFVPSIMHRLQSLLLAVN 961
S + + K++ +PPEL + P++L +F PS+M+R+++L+LA
Sbjct: 1149 SSKIRDEGPYVIKVNNRVHMPPEL----LIPLNLPEDILRAFYLFPSLMYRMETLMLASQ 1204
Query: 962 LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
L++ + I + +LEAITT +C EDF +E LE LGDS LKYA S LF + N
Sbjct: 1205 LRS----EVAYDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPN 1260
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS--------- 1072
HEG LS + IISNAAL +LG E K+ G+IR +FDP+ W+ PG +
Sbjct: 1261 KHEGQLSSSRTDIISNAALYRLGIEHKIQGYIRDAAFDPRRWLAPGQLTNRPFHCKCPVD 1320
Query: 1073 --------YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLD 1124
+ ++D + G + + SKT++D VEA+IGA+ GG + FL
Sbjct: 1321 SEVVTKDIHVIDDKPTIKIGQACDKGHRWMCSKTISDCVEAIIGAYYVGGGLRAAVAFLR 1380
Query: 1125 RIGIKVD-----FVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
+G+ + + Q + ++ L + L Y+F LL+EALTH S+
Sbjct: 1381 WLGVDAEIEEELIMQTILSASMQTYLPKIDLTEALGAKLGYAFSVKGLLLEALTHPSHQE 1440
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
E YQRLEFLGDA LD L+T +L+N + G LTD+RSASVNN+ +A +VKH
Sbjct: 1441 SEERYSYQRLEFLGDAALDILLTWHLFNSHKDTDEGELTDLRSASVNNENFAKVAVKHKF 1500
Query: 1240 HKHILHASHELYKRINITVDSFEKLSLGS-TFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
H + H+S L +I +S E S+ ++ PK LGDI+ES+AGAI +D+
Sbjct: 1501 HHFLQHSSEILLDQITEYANSLENSSMDEINLSSDAPLRGPKVLGDIVESIAGAILIDTK 1560
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEV 1358
+ +VV+ +PLL P++TPE + P REL E+C +N + + + K ++V
Sbjct: 1561 LDLDVVWGVFKPLLSPIVTPENLELPPFRELLEWCNRNGYFLG--IKCTDGEKLQAILDV 1618
Query: 1359 QANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
Q L +KK AK A +LK L
Sbjct: 1619 QLKDMLVVRRGFGKNKKDAKAHAASMLLKDL 1649
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQ 603
Y V +TG T SSV++I YC +LP D Y P F +C L LP++ +
Sbjct: 632 YRVGTTGAKVTADSSVNVIVQYCDKLPKDKYHTRRPLFEFTDHGDGFVCKLTLPSSDVLP 691
Query: 604 TVIAQG--NIKTLKQAACLEACKKLHQIGALTDNLLPDI 640
++ + + KQ CL+ACK+LH +GAL D L P +
Sbjct: 692 PLVGPKVRSKQKAKQLVCLDACKQLHLLGALDDCLCPRV 730
>gi|343791208|gb|AEM61141.1| RNase III dicer-like protein [Puccinia striiformis f. sp. tritici]
Length = 1386
Score = 311 bits (796), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 369/1381 (26%), Positives = 602/1381 (43%), Gaps = 224/1381 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP---FVAVFLVPKVV 79
R YQ E LE A K+N I+ +TG+GKTL+A+ L+ ++ K +P + FLVP
Sbjct: 22 RLYQAELLEEAKKRNIIIRADTGTGKTLVALNLI-AWTAAQPKSNPDDHLIQAFLVPTRP 80
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQAE I+ + L+V Y GD+ + W+ W+ E+++ +VLV T Q+ L
Sbjct: 81 LVHQQAEYIQSQSILRVKAYTGDLQPELWNIDKWQSELNEVDVLVSTAQVSL-------- 132
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS--KVSS 197
LI DE HH R H Y IM YHRL + + LP+I G+TASPI + +
Sbjct: 133 -------LIFDEAHHCRKNHVYNQIMRSHYHRLAKNPTNRLPKILGLTASPIWNYKDLDK 185
Query: 198 SEQDYWQKIHDLETLMNSKVYTCA---SESVLSNFIPFSTA----------KFKFYKYDE 244
+E D I L++ + +++Y + NF P A K + +D+
Sbjct: 186 AEDD----IRSLQSSLAAQIYEVKRHIDDVSQHNFKPTELAIYFEPSPDFVKLSHHPWDQ 241
Query: 245 IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
I L H + +L + + E++ L EL T Y L+ L WL
Sbjct: 242 INELLTLHASPKLIV-------AFESVSL-----EL---------GTYAYSLAILD-WL- 278
Query: 305 LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD 364
K+ TI + + LD + I Q L+ + D ++D
Sbjct: 279 -KSLLTIGSTKQ-LMSGRLLDPSHQERI--------QGLIKQL----------DETVDID 318
Query: 365 S---GLLTEKIVCLIESLLEYRGVED---IRCIIFVERVITAIVLQSLLSE-------LL 411
L+ K++ L + L+ Y+ +D CI+FVER A +L LL L
Sbjct: 319 DIPEDQLSAKVIALNKILVNYKEKDDHGNFLCIVFVERRQHAQLLPILLERNTQLKDFLR 378
Query: 412 PRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
P T + + GI+ SR Q + V +FR G N+ +ATS+ EEGLD +SC +VI
Sbjct: 379 PAALTGHGGHNENDIIGIKMDSRT-QKKTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVI 437
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLA-SGNKMRKEVLSHAS 530
FD T +IQSRGRAR ++S+Y++M+ +G S+ YLA SG +E A+
Sbjct: 438 RFDLITTWKGYIQSRGRARARDSEYIVMLPAGSSS------KYLAFSG----EEDNLKAA 487
Query: 531 LPCSPLNNHMYGEDFYHVEST-----------GTIATLSSSVSLIYFYCSRLPSDGYFK- 578
L P N + GE VEST +I T S++ SL+ C +P D +
Sbjct: 488 LYDRP-ENELIGEG--EVESTPQLICRLPDGKDSILTYSAATSLLNDVCQLIPPDEFLPI 544
Query: 579 PTPKFHIN--KEMGICTLYLPNNC---PIQTVIAQGNIKTLKQA---ACLEACKKLHQIG 630
P++ + + IC + LP P Q + T K+A A EAC+ L + G
Sbjct: 545 VAPEYEMTCLGDNFICQVTLPPMAALDPSQRTFKGLEMTTKKEAKRSAAFEACRVLRERG 604
Query: 631 ALTDNLLP---DIVVEKHDAQKRGNEPYNAEHPIY-FPPELVNQSPQDTKITYHCYLIEL 686
L ++ LP D + DA R E + P Q ++ H ++
Sbjct: 605 VLNEHFLPQREDKTGKPCDADGRELETAPLSDQVQAIIPNAFGQFRTSPEVWLH--VMSF 662
Query: 687 KQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCR 746
+ S + R L ++ FD E L+V ++ R++ + +
Sbjct: 663 PDDGSAGYSTIGFLCGRRLSLPDGLQL--FDDERP---LSVEIQQTHRMEWGKGESSINL 717
Query: 747 RFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP--STGQLIDWKTVATVLFPRD 804
+ T R++M +++ + DG ++ +L+ P + IDW V T L P
Sbjct: 718 QRLETFTRLVMQAAVNR--KPYDG-------KLHFLVAPLLKDTREIDWSLVDTPLIPLS 768
Query: 805 NGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFT 864
+ + R + + C + SL P Q+ + + +
Sbjct: 769 GPADSTRYQCIIAPIRPLQHRIFDTCEPSDNLSLDSPP---QLVPASPNMRDFSKKISKF 825
Query: 865 RNNGSVTTYKKHY---EERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISF 921
N G YK Y EE+Y +L + FH N L K + + +
Sbjct: 826 HNLGHF--YKVVYDMKEEQYQGELVY-------LETTFHASNNLLKSKTTLAQPHRTL-- 874
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
LP +LC P +L + F+++PS+ + L A L + + PTI +
Sbjct: 875 -LPLKLCTGTHIPRTL--WKVFSYLPSLTRLVHDSLQATAL--------FEQLNFPTISL 923
Query: 982 L---EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
L +A+T + ++LET+GD+FLK A S ++ ++ EG +S + + + NA
Sbjct: 924 LLGMQALTPPGVGVPWDYQTLETVGDTFLKLATSVHVYLSHLKKGEGDMSHVRSKSVDNA 983
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
L + + LP FI ++ F + G L NG + + + +
Sbjct: 984 YLRRKAVQANLPSFILSQRFRTDRFRDAQTEDGK------ELANG-----SFSRTIPRRV 1032
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV---NVPY-QRQFQVHAER------- 1147
++DVVEAL+GA TGG +GL ++G +D VP+ QR + E
Sbjct: 1033 LSDVVEALLGAGFLTGGIELGL----KVGTALDLCFGGTVPWNQRTLNLSFESAALSRLD 1088
Query: 1148 ---LVNVRHLESLLNYSFRDPSLLVEALTH---GSYMLPEIPRCYQRLEFLGDAVLDYLI 1201
L+ L+ + Y F++ LLV+ALTH S+M CY+R E+LGDAV+D I
Sbjct: 1089 PSILLKCETLQQKIGYVFKEQLLLVQALTHRSANSFMT----NCYEREEWLGDAVIDMWI 1144
Query: 1202 TVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDS 1260
+ + ++ + LT R+ V+N ++K GL + I+H S + +++
Sbjct: 1145 VEHAFKRFANATAEELTLARARVVSNGSLGFLAIKKLGLQEIIMHKSENFDQACREAIEA 1204
Query: 1261 FEKLSLGSTFGWESVTSF-----PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
E + F + F PK L D++E++ G++F+DSG + + V++++ + E +
Sbjct: 1205 IEPFTKIEEFFSKMDNLFVVFDPPKILNDVLEAIVGSVFIDSGFDLQTVYRTLDIIFEDV 1264
Query: 1316 I 1316
I
Sbjct: 1265 I 1265
>gi|134084339|emb|CAK48679.1| unnamed protein product [Aspergillus niger]
Length = 1531
Score = 310 bits (793), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 365/1412 (25%), Positives = 582/1412 (41%), Gaps = 229/1412 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY------AYLLRKPSPFVAVFLVP 76
R YQLE E A QNTI L+TGSGKTLIA++LL+ + KP +A FLV
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHR-IAFFLVD 176
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V L QQA ++ + D VG ++G MG D W + W + K+ V+V T +IL L
Sbjct: 177 SVTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLN 236
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY K++ I +LI DE HH + H YA I+ + Y LE S PRIFGMTASPI +K
Sbjct: 237 SYIKMSQINILIFDEAHHTKKDHPYARIIRDSY---LEEVYSKRPRIFGMTASPIDTK-- 291
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA--LYTHLA 254
D + LE L++S++ T ++ S+L + + E P A LY HL
Sbjct: 292 ---GDIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLE 348
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
D + LE + QA SELG W + +A
Sbjct: 349 DRFGDMA-----CLEGIFRFAWQAS-----------------SELGRWCSDRAW------ 380
Query: 315 ESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA---------------EWSIGDDS 359
+ A + L ++ K S+ S + VP A ++
Sbjct: 381 -ARALADDVLPKLEGSVRKTANSETS----SNVPESAYKEILRITEASEIVKSYAFSSPE 435
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSEL-LP-RHCT 416
F G L+ K+ L E L Y G + + +CI+F ++ TA++L L L +P
Sbjct: 436 TF----GQLSPKVQVLREELARYFGRQTETKCIVFTQKRYTALILAELFQTLNIPFLRPG 491
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+G+ +G+ R++ +V +FR G +N + ATS+ EEGLD+ CNLV+
Sbjct: 492 VLIGVRSGDLAGMNITFRQQFISLV-KFRTGEINCLFATSVAEEGLDIPDCNLVV----- 545
Query: 477 RTVCSFIQSRG----RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
+ C + R R R+ + + + + G YL S KM K +
Sbjct: 546 -STCKAVGVRDISIQRMRVWSKEGIWSMSRG----------YLRS--KMLKTL------- 585
Query: 533 CSPLNNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
P + +YG D + ++STG T S+ +++ Y S L + F
Sbjct: 586 --PEDRLLYGFDHDLDTVLQKDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFS 643
Query: 579 PTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTD 634
+ + G +C + LP PI+ + +K K++A + C L + L D
Sbjct: 644 AQVTYVVLPINGAFVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDD 703
Query: 635 NL-------LPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELK 687
+ LP + +A+ +++ + P L + H I
Sbjct: 704 HFNSIYHRRLPAM----RNAKLAITSKRTSQYDMISKPSLWGRKQGMPPKELHGTFITFL 759
Query: 688 QHFNYDISARNIVLAMRTELESEIK-KVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCR 746
++L R L + + D +VE +T L+ ++ L +V
Sbjct: 760 PSMQLSHEPAPLLLFTRERLPHFPEFPIFLDDDVETTIITTPLEK--QLLLSEKEVDALT 817
Query: 747 RFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNG 806
F + +FR + DK E + + ++ YL Q++DW+++ V RDN
Sbjct: 818 VFTLRVFRDVFHKTYDKEPEKMAYWLAPAKVQSSYLPSYDPRQILDWESLTYV---RDND 874
Query: 807 S---KHNMNCSTMFNARIVHTKSG--PLCTCKIHNSLVCTPHNGQIYCITGVLGHLN--A 859
S N + + + + G T + +SL + H+N
Sbjct: 875 SIPFSTNADPESWVDLFVFDAWDGRCRFFTVGVEHSLT---PSSPPPPFVARRRHMNDVM 931
Query: 860 NSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKI 919
N + + S + + C +P+L + +N L K ++ ++
Sbjct: 932 NYCLSLSKNSRAKF---------LSTCHWDQPVLRAELVRLRRNLLDKMTDTERDVETRC 982
Query: 920 SFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI 979
+ P + ++ I ST +S P+I+ R+ + L+++ L N T+
Sbjct: 983 FICIEP----LKVSAIPASTAFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLD 1032
Query: 980 KVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
LEA T D H E LE LGD FLK A S LF ++ E
Sbjct: 1033 LALEAFTKDSDNTDEHRAQQIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEF 1092
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG-- 1083
V + +I N L ++++ +IR+ F + ++ L G
Sbjct: 1093 DYHVNRMCLICNKNLFNAAVDKEIYKYIRSRGFSR----LTDAARHTWYPEGLKLLQGKD 1148
Query: 1084 --RKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF---------------LDRI 1126
RK + + KT+ADV EALIGA L +GG + +R
Sbjct: 1149 HSRKATTESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERW 1208
Query: 1127 GIKVDFVNVP-YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIP 1183
+ F +P YQR+ AE ++ R +E L+Y FR P+LL A TH SY ++P
Sbjct: 1209 KDYISFYTIPKYQRRAADGAELYLS-RKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP 1267
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
CYQRLEFLGD+++D + L+ ++P P +LT+ + A V+N +VK GLH H+
Sbjct: 1268 -CYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHL 1326
Query: 1244 LHASHELYKRINI---TVDSFEKLSLGSTFGWESVTSFPKA----------------LGD 1284
+ S L +I + + E S G+ W PK L D
Sbjct: 1327 KYFSAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQCLPD 1386
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
++E+ GA+FVDS N EV+ + R ++P
Sbjct: 1387 MVEAYVGAVFVDSDFNFEVIERFFRDYIKPFF 1418
>gi|403171531|ref|XP_003330752.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169221|gb|EFP86333.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1403
Score = 308 bits (790), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 365/1397 (26%), Positives = 607/1397 (43%), Gaps = 195/1397 (13%)
Query: 3 PVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAI-MLLRSYAY 61
P S++++ + ++L R YQ E LE A K+N I+ +TG+GKTL+A+ +++ + A
Sbjct: 8 PRSVDAEDSSVDVKESLKIPRLYQAELLEEAKKRNIIIRADTGTGKTLVALHLIVWTAAQ 67
Query: 62 LLRKPSPF-VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
P+ + FLVP LV QQAE I+ + L+V Y GD+ D W+ W+ + +
Sbjct: 68 TESAPNGHQIQAFLVPTRPLVHQQAEYIQSQSTLRVKAYAGDLPADLWNVDKWRSGLKEV 127
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
+V+V T QI D + ++K I +LI DE HH R H Y IM YHRL + L
Sbjct: 128 DVIVSTAQIFHDLISKGFWKFEDISLLIFDEAHHCRKDHVYNQIMRSHYHRLAKDPAQRL 187
Query: 181 PRIFGMTASPIKS--KVSSSEQDYWQKIHDLETLMNSKVYTCA--SESVLS-NFIPFSTA 235
P+I G+TASPI + + +E+D I DL+ + +++ +E V NF P A
Sbjct: 188 PKILGLTASPIWNYKDLERAEKD----IKDLQCSLAAQICEVKRHTEDVSQHNFKPNERA 243
Query: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+ +D P A +L H + DL A L K+ +T
Sbjct: 244 VY----FDPSP-----------AFQKLSHPPWEQINDLLTKHASL------KLITTFESV 282
Query: 296 LSELGVWLALKAAETISCYESDFFAWEQ----LDGFGETIIKKFGSDASQALVTYVPSGA 351
ELG + Y W + + G + + + Q V V +
Sbjct: 283 FLELGNY----------AYSLSILDWLKSLLVVGGPNQLMSGRLLDPNHQQKVKQVTNQL 332
Query: 352 E--WSIGDDSKFNLDSGLLTEKIVCLIESLLEYR---GVEDIRCIIFVERVITAIVLQSL 406
E SI D + L+ K++ L + L++Y+ G +D CI+FVER +L +L
Sbjct: 333 EELLSIND-----IPENQLSSKVIALNKLLVKYKEEDGRDDFLCIVFVERRQHTQLLFAL 387
Query: 407 LSELLPRHCTWKTKYIAGNNSG-------IQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
L + +AG+ G I+ SR QN+ V +FR G N+ +ATS+ E
Sbjct: 388 LERNTQLKGFIRPGALAGHGGGNENDLLGIKMDSRA-QNKTVAKFRTGEHNLTIATSVAE 446
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLA-SG 518
EGLD +SC +VI FD T +IQSRGRAR +NSDY++M+ + S+ YLA SG
Sbjct: 447 EGLDFRSCRVVIRFDQITTWKGYIQSRGRARARNSDYIVMLPTDSSS------KYLAFSG 500
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYH--------VESTGTIATLSSSVSLIYFYCSR 570
KE A+L P N + G + +I T S+ L+ C
Sbjct: 501 ----KEDELKAALYDRPDNELIGGGAVEPTPQLICRLADGNDSILTYGSAPGLLNDVCQL 556
Query: 571 LPSDGYFKP-TPKFHI-------NKEMGICTLY-LPNNCPIQTVIAQGNIKTLKQAACLE 621
+P D + P++ I ++ + + LP++ + K K++A E
Sbjct: 557 IPQDEFLPVLAPEYEIMCLGESFKSQVTLPPMAALPSSQRTFMGLEMSTKKEAKRSAAFE 616
Query: 622 ACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHC 681
ACK L ++G L ++ LP H K G + P + D + +
Sbjct: 617 ACKVLRELGVLNEHFLP------HREDKTGQARDADDQVQAIIPNVYG----DFRTSQEV 666
Query: 682 YL--IELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP 739
+L I S + A ++ + +D + L V +K R+
Sbjct: 667 WLHEISFPDESPAGFSTMGFLCAQHVDISEGLHL--YDHYQDSRTLPVKIKRSRRMTWAQ 724
Query: 740 NQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQL--IDWKTVA 797
+ + + + T R+++ +++ +E R + +L+ P IDW V
Sbjct: 725 DDLSINLQRLETFTRLVIQVAVNR-----KSYEGR----LLFLVAPLLNDTCEIDWNLVE 775
Query: 798 TVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHN---GQIYCITGVL 854
T L P N + T+ +H + C S PH+ GQ
Sbjct: 776 TPLIPLSNHADSLRYQCTIVPIPHLHCRIFDTCEPSGDLSFASKPHHVPAGQ-------- 827
Query: 855 GHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQK 914
H+ F + Y Y ++ + L+ + F V + LSK +
Sbjct: 828 -HMGD---FCKKISKFRNLGHFYAVVYNLKPEQFKGKLVYLQSTFEVLDNLSKS-ESLLT 882
Query: 915 EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA------VNLKNMLLD 968
+P ++ LP +LC+ P SL + F+++PS+ L L A ++ + L
Sbjct: 883 QPYRLL--LPLKLCQGSRIPRSL--WKVFSYLPSLTRLLHDALQAKFLFKRLDFPAISLP 938
Query: 969 HCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
H + +T P + V + ++LET+GD+FLK A S ++ ++ EG +S
Sbjct: 939 HGIHALTPPGVGV-----------PWDYQTLETVGDAFLKLATSVHVYISHLRKGEGDMS 987
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYV 1088
+ R I NA L + + LPG I ++ F +G + D G+++
Sbjct: 988 HVRARSIDNAYLRRKAVQANLPGSILSQRF----------RTGKFR--DAQTEEGKELAN 1035
Query: 1089 TG-RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF----VNVPYQRQFQV 1143
+K+ + ++DVVEAL+GA L TGG +GL ++G +D ++ QR +
Sbjct: 1036 GNFSRKIPRRVLSDVVEALLGAGLLTGGIELGL----KVGTALDLCFGGISPWSQRTLTI 1091
Query: 1144 HAER----------LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1193
+ L+ +E +NY F++ LV+ALTH S + CY+R E+LG
Sbjct: 1092 SFGKDAHDKLDPSMLLTCEQIERKINYVFKEKLFLVQALTHRSAN-SFLTNCYEREEWLG 1150
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYK 1252
DAV+D I + Y ++ + L+ R+ N ++K GLH+ I+H S ++
Sbjct: 1151 DAVIDMWIVEHAYKRFDNATADELSLARAKVACNGSLGFLAIKKLGLHEFIMHKSDNFHQ 1210
Query: 1253 RINITVDSFEKLSLGSTFGWESVTSF------PKALGDIIESLAGAIFVDSGCNREVVFQ 1306
+++ E + S F + ++ + PK L D +E++ GA+FVDSG N ++
Sbjct: 1211 ACAEAIEAIEPFTKISEF-FSNINNLFVVFDPPKILNDALEAIVGAVFVDSGLNLPTAYR 1269
Query: 1307 SIRPLLEPMITPETMRF 1323
+ + E +TP R
Sbjct: 1270 VLDVIFED-VTPSLSRL 1285
>gi|121807817|sp|Q2VF19.1|DCL1_CRYPA RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL-1; Includes: RecName:
Full=ATP-dependent helicase DCL-1
gi|77632774|gb|ABB00356.1| dicer-like protein 1 [Cryphonectria parasitica]
Length = 1548
Score = 306 bits (784), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 370/1498 (24%), Positives = 622/1498 (41%), Gaps = 208/1498 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLL----------RSYAYLLRKPSPFVAV 72
R+YQ+E E A +QNTI L+TGSGKTLIA +LL R+ R +A
Sbjct: 100 RDYQMELFERAKQQNTIAVLDTGSGKTLIAALLLDHTVNQELEDRAKGLPRR-----IAF 154
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
FLV KV L QQ ++ + V + G+ + W W+ +++ HEV+V T +IL
Sbjct: 155 FLVEKVALAFQQHAVLECNLAHSVAVFSGESIKNTWTKGFWETQLADHEVIVCTAEILNQ 214
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
L+ +Y +++ I +L+ DE HH + H YA I+ ++Y + G LPRIFGMTASP+
Sbjct: 215 CLQYAYIRIDQINLLVFDEAHHTKKNHPYARIIKDYYASGKDRG-LRLPRIFGMTASPVD 273
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTH 252
+ + D Q +LE L++S++ T A L + K YKY+ + + T
Sbjct: 274 ALI-----DVRQAAIELEGLLHSRIATTADPDALRRAVG-RPKKEIIYKYNPLVKPIQTM 327
Query: 253 LADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
L +L + + + + +EA A ELG W + +
Sbjct: 328 LTFKLRPLIANNKQFSKAFAFSEAAAR------------------ELGTWFVDRMWQLFL 369
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKI 372
E + + ++ K + A I + GLL+ K+
Sbjct: 370 EDEELLKLEAKTE---RSLSKDMAAPEVVEKHRNAVRSARELIRSHEFPKPEPGLLSSKL 426
Query: 373 VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS--GIQ 430
L + L EY IRCI+FVER TA +L K + G N+ G
Sbjct: 427 KTLSKLLEEYFTDSSIRCIVFVERRWTAKLLTDFFESHAAEIPGLKVGSLMGANAEGGSS 486
Query: 431 CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRAR 490
S ++Q + F++G N I ATS+ EEGLD+ CNL+I FD +T+ +IQSRGRAR
Sbjct: 487 QTSFREQIRTILSFKKGNTNCIFATSVAEEGLDIPDCNLIIRFDICKTMIQYIQSRGRAR 546
Query: 491 MQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF----- 545
+S Y+ +++ G+ R+ + A K+ + + P + + G D+
Sbjct: 547 QADSTYIHLIEGGNG-DHRRIMHQNAENEKLLRRFCN-----TQPEDRLLKGSDYDMDFF 600
Query: 546 ---------YHVESTGTIATLSSSVSLIYFYCSRLPS-DGYFKP---TPKFHINKEMG-- 590
Y ++STG T +S+ ++ + + L + D Y + + I G
Sbjct: 601 LRQERNQRQYTIKSTGARLTYKNSLPILQAFLNTLRNQDDYAEGMDLVADYSILSVQGGF 660
Query: 591 ICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTDNLLPDIVVEKH- 645
IC + +P P+ + I G + + KQ +A E C +L Q L D+L V ++H
Sbjct: 661 ICEVMMPPLSPVTSAI--GKVYSTKQVAKCSAAFELCFQLIQKKFLDDHLRSKFVEKRHV 718
Query: 646 --DAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAM 703
+A+ + A++ + P++ + K+ Y LI L + + +R + +
Sbjct: 719 MANARLAVSSKNKAKYDMRLKPQIWAELGVPEKL-YATVLI-LSKPSALERPSRPLFILT 776
Query: 704 RTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQ--VLLCRRFQITLFRVIMDHNL 761
RT L + F VE+ + + + + P + + L +F + +F I +
Sbjct: 777 RTPLPQLKPFLLFLGPVEQEMTSDLVCQVLNCPITPTEEDLQLLTKFTLKIFVDIFNKKY 836
Query: 762 DKLNEILDGFELRDNLEIDYLL--LPSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNA 819
+ L F N + +L L +DW + V RD + F
Sbjct: 837 AANAQALPYFFAPTNKDHVFLFSNLQDPRNAVDWPLLRHVA-DRDAEAYTGDEPEEFFQD 895
Query: 820 RIV---HTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRN-------NGS 869
+ + H + I L CT + + H + + R + S
Sbjct: 896 KYIVDPHDGARRFWLQGIRKDLTCTS------PVPADVEHQPTHRQWKRREVPHDILHWS 949
Query: 870 VTTYK---KHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPE 926
+T +K + +E ++ + +P++ G+ +N+L+ E SK F
Sbjct: 950 LTAWKATREAHENKWK-----ENQPVVVGKYATLRRNFLADI-----NETSKNPF----- 994
Query: 927 LCRIIMAPISLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLL-------------- 967
C ++ P+ +S +PSI+HR++ L+A++ +L
Sbjct: 995 -CYFVLEPMRISPLPVDVVAMAYLLPSIIHRIEQNLIALDACRLLQLDIHPDLALEALTK 1053
Query: 968 --DHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
D+ ++ + +I+ E + + + E LE LGDSFLK A + +F N E
Sbjct: 1054 DSDNQGEDERMDSIQAFEPVNFQPGM-GANYERLELLGDSFLKMATTIAVFTLIPNKDEF 1112
Query: 1026 LLSVKKERIISNAALCKLGCEQ--KLPGFIRTESFDPKMWI-IPGDNSGSYELNDDSLFN 1082
++ +I N L + KL +IR++SF+ W + G L
Sbjct: 1113 DYHCERMVMICNQNLFGVAKSDDLKLHEYIRSKSFERGTWYPVLKLEFGKTHL------- 1165
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF 1141
+ + ++ K++ADV EALIG A+++T + + + + V+ P +
Sbjct: 1166 -KTLKQMDEHRLADKSIADVCEALIGAAYMTTRKHDDYDLAVRAVTRLVNHKQHPMTKWD 1224
Query: 1142 QVH--------------AERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRC 1185
H A L + + Y F+ P +L A H S Y+ ++P
Sbjct: 1225 DYHAAYVMPGWQTMPANAAELDMAQKIHEATGYQFKHPRVLRSAFRHPSRPYVFDKVPH- 1283
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGDA+ D YL++ P P +LT+ + A V+N +V G HK ILH
Sbjct: 1284 YQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGFHKFILH 1343
Query: 1246 ASHELYKRIN-----ITVDSFEKLSLGSTFG----------WESVTSFPKALGDIIESLA 1290
+ +I+ IT G W PK + D++E+
Sbjct: 1344 HHASIGSQIHEYVTEITEARRAAEDAAEAAGKPRSAYSRDYWVEAPQPPKCIPDVLEAYV 1403
Query: 1291 GAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-------HPVRELTEY------CQKNH 1337
GAIFVDS + VV Q + P +MR HPV T+Y C
Sbjct: 1404 GAIFVDSKYDYSVVQQFFHAHVLPFFA--SMRMYDTFANKHPVTFFTQYVFETFGCHAYG 1461
Query: 1338 FSMKK-PVASR---ISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
++ PV ++GK V + +G++ E D+ + AK A ++ L LR+
Sbjct: 1462 LHAEEMPVKDDTGLVTGKTQVVAGILLHGQVVEGAVRDSG-RYAKIAAARKALDKLRS 1518
>gi|62320294|dbj|BAD94606.1| CAF protein [Arabidopsis thaliana]
Length = 690
Score = 305 bits (782), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 201/526 (38%), Positives = 289/526 (54%), Gaps = 62/526 (11%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPI 935
RYG+ L ++PL+ GR + + +N LS +Q + + + LPPELC ++ P+
Sbjct: 43 RYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELC--VVHPL 100
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH 995
S S +PSIM R++S+LLAV LKN++ + IPT K+LEA+T CQE F
Sbjct: 101 SGSLIRGAQRLPSIMRRVESMLLAVQLKNLI------SYPIPTSKILEALTAASCQETFC 154
Query: 996 LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
E E LGD++LK+ S+ LF Y HEG L+ +++++SN L + + L +I+
Sbjct: 155 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQA 214
Query: 1056 ESFDPKMWIIPG----------DNSGSY---------ELNDDSLFNGR------KIYVTG 1090
+ F P W PG D S+ E N D +G + ++
Sbjct: 215 DRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLSS 274
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----------FVNVPYQR 1139
+ + SKT+ADVVEALIG + GG+ + IGI V+ VNVP
Sbjct: 275 YRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES- 333
Query: 1140 QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
+ ++ LE L Y F++ LLVEA+TH S + CYQRLEF+GDAVLD+
Sbjct: 334 -----VLKSIDFVRLERALKYEFKEKGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDH 387
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
LIT +L+ Y L PG LTD+R+A+VNN+ +A +VKH LH ++ H S L K+I V
Sbjct: 388 LITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVK 447
Query: 1260 SFEKLSLG---STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
+ S ++FG + PK LGDI+ES+AGAIF+DSG + ++ +PLL+PM+
Sbjct: 448 EVQTESSKPGFNSFGLGDCKA-PKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMV 506
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
TPET+ HPVREL E CQ+ ++ ASR SG A TVEV +G
Sbjct: 507 TPETLPMHPVRELQERCQQQAEGLEYK-ASR-SGNTA-TVEVFIDG 549
>gi|400595165|gb|EJP62972.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1465
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 357/1405 (25%), Positives = 587/1405 (41%), Gaps = 207/1405 (14%)
Query: 13 EVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP------ 66
EVSA + R YQ E E A +NTIV L+TGSGKTLIAIMLLR ++L +
Sbjct: 55 EVSA-LMATPREYQNELFERAKSKNTIVVLDTGSGKTLIAIMLLR---HVLEQELEDRAN 110
Query: 67 --SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLV 124
+ A F+V KV L QQ + I V K++G++ W + ++ ++V
Sbjct: 111 GGTRKTAFFVVDKVALCMQQYQVIHATLPFSVTKFYGELQPLEQSQTHWDAQFDENMIIV 170
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRI 183
T Q+LLD L + + I +LI DE HHA+ +H YA IM +Y R D+N+ PRI
Sbjct: 171 CTAQMLLDCLSHGFINMRQINLLIFDEVHHAKKEHPYAAIMKRYYPR-----DNNVKPRI 225
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA-KFKFYKY 242
G+TASP V + D + LE+LM S++ T + + + + K + YK
Sbjct: 226 LGLTASP----VDTGTLDIETAVEKLESLMCSEIATVSDAVLEAGWTKREQKEKVRLYKP 281
Query: 243 DEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+ YT LA R ++ + Q + +KI S L G W
Sbjct: 282 LKDVKDCYTKLA-----------RDIDEFAQHVPQLAASVQFSAKIGSAL-------GPW 323
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSD----ASQALVTYVPSGAEWSIGDD 358
A + + + +D G+ F D AS AL + P I D
Sbjct: 324 CADRFWQILL---TDDLMRNMAVQLGKGKKTNFSYDRYDAASGALESLRP------IIDH 374
Query: 359 SKF---NLDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSE----- 409
+F + D ++ K+V L E+L + + +C++FV+ A++L S+
Sbjct: 375 HRFAPASTDEDAISSKLVVLRETLCAAFEEESETKCLVFVDEQFMAMILADYFSQPGTAP 434
Query: 410 --LLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
++ K A N ++ + +K + +F+ G N + ATS+ EEGLD+ +C
Sbjct: 435 QGMIADFMIGLAKSFAHANLSLRERMQK-----LNDFKHGNTNCLFATSVAEEGLDIPAC 489
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS 527
+LVI FD + +IQSRGRAR +S Y+ M++ ++ +R N +R+
Sbjct: 490 DLVIRFDMCISAIQYIQSRGRARKASSVYITMMEQDNNQHLNRFRNVTFDAQCLRR--FC 547
Query: 528 HASLPCSPLNNHMYG-EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI- 585
P + + E V T T++T +S++++ + S L P P++ +
Sbjct: 548 QKLPPDRSIGIYERPPEKELLVADTATLST-QNSMAVLARFVSTLAQGMDRSPKPEYVVC 606
Query: 586 -NKEMGICTLYLPNNCPIQT---VIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPDI- 640
C + LP++ P + ++ + ++ + AA EAC +L ++G++ NL P
Sbjct: 607 ATGTNFTCWVILPDSAPFNSTTGILERSKVRA-RCAAAYEACTRLIEMGSINKNLQPTFK 665
Query: 641 --VVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARN 698
+ +A+ + + + P++ P +++ +
Sbjct: 666 KNLPRMRNARLALSSKKQKVYTMLVKPKMWTSLPAGIPAVLFQTFVQV---LPDSAAVTP 722
Query: 699 IVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD 758
I L R EL +I + + + ++ L G +Q+ P QV F + LF +
Sbjct: 723 IALLTREEL-PDIGPIKLFVSADV-IMSAKLIPGGAVQVSPEQVQKLAAFTLCLFDDVFS 780
Query: 759 HNLDKLNEILDGFELRDNLEIDYLLLPSTGQL-------IDWKTVATVLFPR-------- 803
FE +D EI + P++ L IDW+ + V+
Sbjct: 781 KK----------FEAKDE-EIPFYFAPASMALYEDEKGAIDWQELEHVVLSMHQSPVVDP 829
Query: 804 DNGSKHNMNCSTMFNAR--IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANS 861
N ++H AR I+H +I ++L T GV H NS
Sbjct: 830 GNIARHYFVVDPHSGARKFIIH---------EIEHALRATDQTP-----AGVPEH--KNS 873
Query: 862 LFTRNNGSVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKIS 920
+ ++ S+ Y + FD E P+ + +N+L + K +
Sbjct: 874 GYQTSDRSIMQYSCSTRRAQRSSIVFDTEQPVYKAWLLSLRRNFLDDDDMETVKGDQRCY 933
Query: 921 FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK 980
L I A ++ + +PSI+HRL + L+ ++ML + +P
Sbjct: 934 ITLQCLKVSAIPADVARAAL----LLPSILHRLDTALIVTEARDML------GLNLPLQL 983
Query: 981 VLEAITTKKC---------------QEDFH-----LESLETLGDSFLKYAASQQLFKTYQ 1020
EA T ++ H E LE LGDSFLK A + L+
Sbjct: 984 AWEAFTKGADDADDDDGELDAEHEHEQQQHGGQRNYERLEFLGDSFLKMATTIALYTRNS 1043
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI--IPGDNSGSYELNDD 1078
E V++ ++ N L + L +IR++ FD + W +P
Sbjct: 1044 EATEFEHHVERMLLLCNKNLFNTALDLGLQSYIRSDRFDRRTWYPNLP------------ 1091
Query: 1079 SLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN---- 1134
L G+ T +++ KT+ADV EA+IGA +G + G + + + VN
Sbjct: 1092 -LVRGKSAKATVVQQLGDKTIADVCEAIIGAAYMSGVQQGGNMD-EAVKAVTKMVNNDNH 1149
Query: 1135 -----VPYQRQFQVHAERL----VNVR----HLESLLNYSFRDPSLLVEALTHGSYMLPE 1181
Y F V A L V+VR + +++ Y FR P LL A TH SY E
Sbjct: 1150 KMTSFSDYYAAFSVPAWHLSPGSVSVRATVDRVAAIIGYRFRSPLLLRSAFTHASYKAEE 1209
Query: 1182 IPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHK 1241
IP YQ LEFLGDA+LD +I +L+ P P LT+ + + +N V+ GLH+
Sbjct: 1210 IP-SYQTLEFLGDALLDMVIVDHLFRTRPHAGPQALTESKMSVCSNQFLGCLCVELGLHR 1268
Query: 1242 HILHASHELYKRINITVDSFEKL----------SLGSTFGWESVTSFPKALGDIIESLAG 1291
+L A + + + L + + W T PKAL D++E+L G
Sbjct: 1269 ELLTADAAVPGHVKAFEEKVAYLREQAAGTGASAATNKAYWTLATRPPKALADVVEALIG 1328
Query: 1292 AIFVDSGCNREVVFQSIRPLLEPMI 1316
A+FVD+ + VV + ++P I
Sbjct: 1329 AMFVDARYDLSVVANFFQRFVQPHI 1353
>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
Length = 1629
Score = 304 bits (778), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 370/1405 (26%), Positives = 590/1405 (41%), Gaps = 205/1405 (14%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS-- 67
E+ S + AR YQ E E A +N I L+TGSGKTLIA +L+R + L+ +
Sbjct: 84 EQESDRIIDQAREYQEELFERAKDENVIAVLDTGSGKTLIAALLIRHFLQQELIDRSQGK 143
Query: 68 -PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
P FLV V L QQA + + KV +GD VD W A W +++ V+V T
Sbjct: 144 PPKTIFFLVNSVPLANQQARFLNANLPQKVIALYGDSKVDLWRRAEWNRICAENNVVVCT 203
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
+L L Y + I +++ DE HH + H Y+ I+ ++Y + + N PRIFGM
Sbjct: 204 APVLDQCLMHGYLNMGQISLIVFDEAHHCKKNHPYSRIIRDYYLKWQD----NRPRIFGM 259
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK---YD 243
TASP V S +D Q + DLE+++ SK+ T SV F P ++ Y
Sbjct: 260 TASP----VDESRKDIKQVVADLESMLQSKIITTNDLSVFG-FAPRPADEYWIYPPPLVG 314
Query: 244 EIPHALYTHLADELAMIE-LKHTRSLE---NLDLNEAQAELIRKK------------VSK 287
E AL+ L IE LK S + DL A+ + K +SK
Sbjct: 315 EYETALHAQLHPLCGFIEDLKQHFSFSKQASRDLGAWVADRVWKYALPTSEHGITAIISK 374
Query: 288 I--NSTLLYCLSELGVWLALKAA-ETISCYESDFFAWEQLDGFGETIIKKFGSDASQALV 344
+ +ST ++ + + G ALK+ E IS E+ FG ++K
Sbjct: 375 LERSSTYIHAIDDAGREAALKSVREAISVIEN--------HDFGAPCLEK---------- 416
Query: 345 TYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVL 403
L+ K+ L + L E Y + R I+FVE+ +TA L
Sbjct: 417 --------------------DNELSPKVAYLRQRLKERYSSFPNTRAIVFVEQRLTAFAL 456
Query: 404 QSLLSEL-LPRHCTWKTKYIAG-NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
L L LP + + G + GI S K Q +E+FR G +N+I ATS+ EEG
Sbjct: 457 CDLFRVLDLP---NVRPGLLVGISQKGIDSSSWKDQEVALEKFRVGTINLIFATSVAEEG 513
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+D+ CNLV+ FD +T ++QSRGRARM+ S Y M++ G + QS ++ ++ + +
Sbjct: 514 IDIPQCNLVVRFDLYKTPIQYMQSRGRARMKGSVYAHMMEEGKQSHQSEVDYAISQDDYI 573
Query: 522 RK--------EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
R+ +L + + M + F S G +A S+S+ L+ Y L
Sbjct: 574 RRYCQELPPDRLLGRGTRLRQIIARDMSCQSFK--TSAGVVANYSNSLMLLNRYAESLAR 631
Query: 574 DGYFKP---TPKFHINKEMGICTLYLPNNCPIQTVIAQG-------NIKTLKQAA---CL 620
G + + M + LP + +G N K++A CL
Sbjct: 632 IGAVSAEVYEELIDVEENMFRYKVILPPTDDERAAAVKGARGDARMNKVLAKRSAAFWCL 691
Query: 621 EACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
++ H + D++ + +A++ ++ + P VN +
Sbjct: 692 VKLRRAHLLDENLDSIFSKVKPHNLNAREAVSDKKDIYEKKLKPDFWVNSGVGSPDLPTE 751
Query: 681 CYLIELK-QHFNYDISARNIVLAMRTEL-ESEIKKVNFDLEVERGRLTVNLKHLGR-IQL 737
++ ++ + D + I+L R+ L E V D VE+ V L+ L R + +
Sbjct: 752 LFITHVRLEPRTPDWTTAGILLLTRSPLPELPSFPVYVDDNVEK---HVILERLDRPVVV 808
Query: 738 IPNQVLLCRRFQI-TLFRVI-----------MDHNLDKLNEILDGFELRDNLEIDYLLLP 785
P Q+ RF + +F + M + L E + D + + L +
Sbjct: 809 SPEQIEALTRFTLCGVFEDVFNKSFAPESQSMSYWLAPPGEQSGKWTFEDVINVPELHVG 868
Query: 786 STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHN-SLVCTPHN 844
+G+ W+ AT DN K NA +V SG K H + P
Sbjct: 869 GSGERQRWQPAATPDTTIDNARK-------WCNAFLVDPGSG-----KFHYFTRDIVPAT 916
Query: 845 GQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFD-REPLLNGRRIFHVQN 903
I + T + +T++K ++ + +D +P+L + + +N
Sbjct: 917 TIWDAIPDSAKDVQKKHKDTIIEFTDSTWRKKGKDLGSLAHKYDPHQPVLQAKLVMAGRN 976
Query: 904 YLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
+L KC +++Q+ E+ P+ I A +S S PSI+HRL++ L+
Sbjct: 977 FLEKCPKEEQR---YAMCEIAPQPLEI--ARVSYSVAQICQLWPSILHRLEAYLIVGEAF 1031
Query: 964 NMLLDHCMQNVTIPTIKVLEAIT--------------------TKKCQEDFHLESLETLG 1003
+ L IP LEA T T + + E LE +G
Sbjct: 1032 DKL-----DLRQIPYNLALEAFTKDINADDEMGEMGIHSELDGTAEPTSSVNYERLEFIG 1086
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGC--EQKLPGFIRTESFDPK 1061
DS LK + +F N EG + K+ +ISN LC + E +L +IR + D
Sbjct: 1087 DSLLKMMTTITVFNRTTCNEEG-MHCKRMEMISNKRLCSVASSPEYELYRYIRAGTGD-- 1143
Query: 1062 MWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS---KTVADVVEALIGAFLSTGGE-- 1116
W Y L GR I +T + + + KT+ADV EA IGA + T +
Sbjct: 1144 RW-----RDTWYPEFLRQLKKGRVIKLTDKHRTHALGKKTIADVCEATIGACIMTTQDLP 1198
Query: 1117 -----NVGLIFLDRIGIKVDFVNVPYQRQFQVHA---------ERLVN--VRHLESLLNY 1160
++G+ + ++ D ++ ++ + + N R + + Y
Sbjct: 1199 TSTRFDLGIKAITKLVGHEDHAITSWREILPMYKAPRWSLAMNDPVANDLARKVYHVTGY 1258
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++P LL A TH S +P QRLEFLGDA LD++ +L+ P P +LT+
Sbjct: 1259 RFKNPCLLRSAFTHSSDQNSPVPDL-QRLEFLGDACLDWVCIWWLFRNNPTRGPQWLTEH 1317
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINI----TVDSFEKLSLGSTFGWESVT 1276
+ A V+N A +V G ++ I +S LY I ++ +E+ + F W VT
Sbjct: 1318 KMAMVSNRFLAALAVILGFNRLISASSPALYAEIGTYAAKVLELYEQEDVKPDF-WTRVT 1376
Query: 1277 SF---PKALGDIIESLAGAIFVDSG 1298
S PKAL D++ES GA+ VDSG
Sbjct: 1377 SGSAPPKALADLVESYLGAVLVDSG 1401
>gi|334185719|ref|NP_001154663.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|332644323|gb|AEE77844.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1570
Score = 300 bits (767), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 234/766 (30%), Positives = 366/766 (47%), Gaps = 95/766 (12%)
Query: 701 LAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
L + + L ++ KV DL + R + ++ G+I+L +++ + FQ F +
Sbjct: 673 LLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKL 732
Query: 761 LDKLNEILDGFELRDNLEID----------YLLLP------STGQLIDWKTV----ATVL 800
+ G + L+ D +LLLP ++ IDW + + V
Sbjct: 733 F--VGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVE 790
Query: 801 FPRDNG-----SKHNMNCST-----------MFNARIVHTKSGPLCTCKIHNSLVCTPHN 844
F + N C+T M ++H + + +V H
Sbjct: 791 FLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHT 850
Query: 845 GQIYCITGVLGHLNANSLFTRNNGS-VTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQN 903
G+IY I + +A S F + S TY +++ ++YGI L +PL+ ++ H N
Sbjct: 851 GRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHN 910
Query: 904 YL------------SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
L K ++++P+ I LPPEL I P ++ S +PS+MH
Sbjct: 911 LLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPELLARIDVPRAV--LKSIYLLPSVMH 967
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
RL+SL+LA L+ + D + N +I + +LEA+TT C E F +E LE LGDS LKY A
Sbjct: 968 RLESLMLASQLREEI-DCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVA 1026
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS- 1070
S LF Y + EG LS +++ IISN+ L +L +KL G+IR +F+P+ W PG S
Sbjct: 1027 SCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSL 1086
Query: 1071 ---------GSYELNDDSLFNGRKIYVT-------GRKKVKSKTVADVVEALIGAFLSTG 1114
+ E+ D F + + G + V SK+V+D EALIGA+ +G
Sbjct: 1087 FPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSG 1146
Query: 1115 GENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLV 1169
G + L + +GI VDF V + + + + + LE + + F LL
Sbjct: 1147 GLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLK 1206
Query: 1170 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDC 1229
EA+TH S Y+RLEFLGD+VLD+LIT +L+N Y PG +TD+RSA VNN+
Sbjct: 1207 EAITHSSL---RESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNEN 1263
Query: 1230 YALSSVKHGLHKHILHASHELYKRINITVDSFEK-----LSLGSTFGWESVTSFPKALGD 1284
+A +VK+ LH H+ + L +IN + SF+K S+ S G PKALGD
Sbjct: 1264 FAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQG-------PKALGD 1316
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK-NHFSMKKP 1343
++ES+AGA+ +D+ + + V++ PLL P++TP+ ++ P REL E C +F K
Sbjct: 1317 VVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVK- 1375
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
S KA T+++Q + L + K A A +L L
Sbjct: 1376 -CSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQL 1420
Score = 234 bits (597), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 263/516 (50%), Gaps = 42/516 (8%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
+Y+L+ E A +N I L TG K+ I L+++ + +FL P V LV Q
Sbjct: 46 SYELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNLVKQ 103
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
Q I+ +LKV +Y+G GVD W W EE SKH+VLVMTPQILLD LR ++ KL M
Sbjct: 104 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYW 203
+ +LI+DECHH G H YA +M EFYH ++ P+IFG+TAS + K SE
Sbjct: 164 VCLLIIDECHHTTGNHPYAKLMKEFYHE-----STSKPKIFGLTASAVIRKAQVSE---- 214
Query: 204 QKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELK 263
LE LM+SK++ + F +T K Y+ P + L ++L LK
Sbjct: 215 -----LERLMDSKIFNPEEREGVEKFA--TTVKEGPILYNPSP-SCSLELKEKLETSHLK 266
Query: 264 HTRSLENLD-------LN-EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYE 315
SL L LN + + E +K++S +L+CL LG+ A AAE C E
Sbjct: 267 FDASLRRLQELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAEV--CLE 324
Query: 316 SDFFAWEQLDGFGE--TIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD---SGLLTE 370
E+ + + E + K+F D + Y+P + S+ D + +L SG ++
Sbjct: 325 KISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQD-DKSLVDLQQNHLSAVISGHVSP 383
Query: 371 KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQ 430
K+ L L +RG + +C+I VER+ITA V++ + + Y+ NN
Sbjct: 384 KLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKK-EASLAYLNVLYLTENNPSTN 442
Query: 431 CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRAR 490
++K Q EI + F+ G VN++ T ++EEG V C+ ++ FD +T+CS+ QS+ A+
Sbjct: 443 VSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAK 502
Query: 491 MQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL 526
NS ++ ++ G+ + L + MR+EVL
Sbjct: 503 QSNSKSIMFLERGNPKQRDHLHDL------MRREVL 532
>gi|334185717|ref|NP_001154662.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|322518661|sp|Q9LXW7.2|DCL3_ARATH RecName: Full=Endoribonuclease Dicer homolog 3; AltName:
Full=Dicer-like protein 3; Short=AtDCL3
gi|332644322|gb|AEE77843.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1580
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 234/766 (30%), Positives = 366/766 (47%), Gaps = 95/766 (12%)
Query: 701 LAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
L + + L ++ KV DL + R + ++ G+I+L +++ + FQ F +
Sbjct: 683 LLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKL 742
Query: 761 LDKLNEILDGFELRDNLEID----------YLLLP------STGQLIDWKTV----ATVL 800
+ G + L+ D +LLLP ++ IDW + + V
Sbjct: 743 F--VGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVE 800
Query: 801 FPRDNG-----SKHNMNCST-----------MFNARIVHTKSGPLCTCKIHNSLVCTPHN 844
F + N C+T M ++H + + +V H
Sbjct: 801 FLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHT 860
Query: 845 GQIYCITGVLGHLNANSLFTRNNGS-VTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQN 903
G+IY I + +A S F + S TY +++ ++YGI L +PL+ ++ H N
Sbjct: 861 GRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHN 920
Query: 904 YL------------SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
L K ++++P+ I LPPEL I P ++ S +PS+MH
Sbjct: 921 LLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPELLARIDVPRAV--LKSIYLLPSVMH 977
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
RL+SL+LA L+ + D + N +I + +LEA+TT C E F +E LE LGDS LKY A
Sbjct: 978 RLESLMLASQLREEI-DCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVA 1036
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS- 1070
S LF Y + EG LS +++ IISN+ L +L +KL G+IR +F+P+ W PG S
Sbjct: 1037 SCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSL 1096
Query: 1071 ---------GSYELNDDSLFNGRKIYVT-------GRKKVKSKTVADVVEALIGAFLSTG 1114
+ E+ D F + + G + V SK+V+D EALIGA+ +G
Sbjct: 1097 FPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSG 1156
Query: 1115 GENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLV 1169
G + L + +GI VDF V + + + + + LE + + F LL
Sbjct: 1157 GLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLK 1216
Query: 1170 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDC 1229
EA+TH S Y+RLEFLGD+VLD+LIT +L+N Y PG +TD+RSA VNN+
Sbjct: 1217 EAITHSSL---RESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNEN 1273
Query: 1230 YALSSVKHGLHKHILHASHELYKRINITVDSFEK-----LSLGSTFGWESVTSFPKALGD 1284
+A +VK+ LH H+ + L +IN + SF+K S+ S G PKALGD
Sbjct: 1274 FAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQG-------PKALGD 1326
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK-NHFSMKKP 1343
++ES+AGA+ +D+ + + V++ PLL P++TP+ ++ P REL E C +F K
Sbjct: 1327 VVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVK- 1385
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
S KA T+++Q + L + K A A +L L
Sbjct: 1386 -CSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQL 1430
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 269/517 (52%), Gaps = 34/517 (6%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
+Y+L+ E A +N I L TG K+ I L+++ + +FL P V LV Q
Sbjct: 46 SYELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNLVKQ 103
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
Q I+ +LKV +Y+G GVD W W EE SKH+VLVMTPQILLD LR ++ KL M
Sbjct: 104 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP-IKSKVSSSEQDY 202
+ +LI+DECHH G H YA +M EFYH ++ P+IFG+TAS I+ + SS +Y
Sbjct: 164 VCLLIIDECHHTTGNHPYAKLMKEFYHE-----STSKPKIFGLTASAVIRKGIVSSPSNY 218
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIEL 262
++ +LE LM+SK++ + F +T K Y+ P + L ++L L
Sbjct: 219 AAQVSELERLMDSKIFNPEEREGVEKFA--TTVKEGPILYNPSP-SCSLELKEKLETSHL 275
Query: 263 KHTRSLENLD-------LN-EAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
K SL L LN + + E +K++S +L+CL LG+ A AAE C
Sbjct: 276 KFDASLRRLQELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAEV--CL 333
Query: 315 ESDFFAWEQLDGFGE--TIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD---SGLLT 369
E E+ + + E + K+F D + Y+P + S+ D + +L SG ++
Sbjct: 334 EKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQD-DKSLVDLQQNHLSAVISGHVS 392
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI 429
K+ L L +RG + +C+I VER+ITA V++ + + Y+ NN
Sbjct: 393 PKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKK-EASLAYLNVLYLTENNPST 451
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
++K Q EI + F+ G VN++ T ++EEG V C+ ++ FD +T+CS+ QS+ A
Sbjct: 452 NVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHA 511
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL 526
+ NS ++ ++ G+ + L + MR+EVL
Sbjct: 512 KQSNSKSIMFLERGNPKQRDHLHDL------MRREVL 542
>gi|148907962|gb|ABR17101.1| unknown [Picea sitchensis]
Length = 685
Score = 299 bits (765), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 266/467 (56%), Gaps = 26/467 (5%)
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
+MHRL++LL+A+ LK +L + + +VLEAITT++C E F LE LE LGD+FLK
Sbjct: 1 MMHRLENLLVAIELKELLTASFPEGSLVTASRVLEAITTERCMEGFSLERLEVLGDAFLK 60
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII--- 1065
YA S++LF Y EG L+ K+ I N+ L K + P +IR E FDPK +
Sbjct: 61 YAVSRRLFLVYDKLDEGQLTKKRSNAIKNSNLYKRAKGKGFPAYIRDEYFDPKQYFALGR 120
Query: 1066 PGDNSGSYEL--------NDDSLFNGRKIYVTGRKK---VKSKTVADVVEALIGAFLSTG 1114
P N + EL D+++ + V K+ + KT+ADVVEALIGA+L
Sbjct: 121 PCKNVCTPELVHMIHYFEGDNTMTDTDFTSVKCTKRHHWLHMKTIADVVEALIGAYLVDS 180
Query: 1115 GENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLV 1169
G L FL IGI++DF V + + + + +++ LE LL Y+F LL+
Sbjct: 181 GFGAALAFLKWIGIEIDFDTSLVGEVCIRSRNNLSLIKCIDIDELERLLGYNFSYKGLLL 240
Query: 1170 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDC 1229
EA H S+ CYQRLEFLGDAVLDY+IT YLY+ YP + PGYLTDMRS +VNN+
Sbjct: 241 EAFAHPSFN-EHNGGCYQRLEFLGDAVLDYIITSYLYSVYPDMKPGYLTDMRSMTVNNES 299
Query: 1230 YALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGW-ESVTSFPKALGDIIES 1288
+A +V+HGL+ +++ S L + VD + L E PK LGDI+ES
Sbjct: 300 FACVAVRHGLYMYLIQKSDSLSSAVTKYVDFMKALFTADRDSCDEPEPKCPKVLGDIVES 359
Query: 1289 LAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRI 1348
AGA+ +D+G + + V++ + +L+P++TPET+ PVREL+E CQ ++ ++ AS+
Sbjct: 360 FAGALVIDTGFDLDCVWKLMLNILQPIVTPETLCLQPVRELSEVCQHHNLTLDYVKASKG 419
Query: 1349 SGKAAVTVEVQANGRLFEHTFLDADKKT----AKKVACKEVLKSLRA 1391
+G + VE + +G+ + +T AKKVA K+ L L+
Sbjct: 420 NGNGYL-VEAKVSGKKVSGSVGGTGTRTSIKDAKKVASKDALLKLKG 465
>gi|15229816|ref|NP_189978.1| protein dicer-like 3 [Arabidopsis thaliana]
gi|7594553|emb|CAB88120.1| putative protein [Arabidopsis thaliana]
gi|94450858|gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana]
gi|332644321|gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1531
Score = 299 bits (765), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 234/766 (30%), Positives = 366/766 (47%), Gaps = 95/766 (12%)
Query: 701 LAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
L + + L ++ KV DL + R + ++ G+I+L +++ + FQ F +
Sbjct: 634 LLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKL 693
Query: 761 LDKLNEILDGFELRDNLEID----------YLLLP------STGQLIDWKTV----ATVL 800
+ G + L+ D +LLLP ++ IDW + + V
Sbjct: 694 F--VGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVE 751
Query: 801 FPRDNG-----SKHNMNCST-----------MFNARIVHTKSGPLCTCKIHNSLVCTPHN 844
F + N C+T M ++H + + +V H
Sbjct: 752 FLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHT 811
Query: 845 GQIYCITGVLGHLNANSLFTRNNGS-VTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQN 903
G+IY I + +A S F + S TY +++ ++YGI L +PL+ ++ H N
Sbjct: 812 GRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHN 871
Query: 904 YL------------SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
L K ++++P+ I LPPEL I P ++ S +PS+MH
Sbjct: 872 LLVDFNEEMVVKTEPKAGNVRKRKPN-IHAHLPPELLARIDVPRAV--LKSIYLLPSVMH 928
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
RL+SL+LA L+ + D + N +I + +LEA+TT C E F +E LE LGDS LKY A
Sbjct: 929 RLESLMLASQLREEI-DCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVA 987
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS- 1070
S LF Y + EG LS +++ IISN+ L +L +KL G+IR +F+P+ W PG S
Sbjct: 988 SCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSL 1047
Query: 1071 ---------GSYELNDDSLFNGRKIYVT-------GRKKVKSKTVADVVEALIGAFLSTG 1114
+ E+ D F + + G + V SK+V+D EALIGA+ +G
Sbjct: 1048 FPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSG 1107
Query: 1115 GENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLV 1169
G + L + +GI VDF V + + + + + LE + + F LL
Sbjct: 1108 GLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLK 1167
Query: 1170 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDC 1229
EA+TH S Y+RLEFLGD+VLD+LIT +L+N Y PG +TD+RSA VNN+
Sbjct: 1168 EAITHSSL---RESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNEN 1224
Query: 1230 YALSSVKHGLHKHILHASHELYKRINITVDSFEK-----LSLGSTFGWESVTSFPKALGD 1284
+A +VK+ LH H+ + L +IN + SF+K S+ S G PKALGD
Sbjct: 1225 FAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQG-------PKALGD 1277
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK-NHFSMKKP 1343
++ES+AGA+ +D+ + + V++ PLL P++TP+ ++ P REL E C +F K
Sbjct: 1278 VVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVK- 1336
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
S KA T+++Q + L + K A A +L L
Sbjct: 1337 -CSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQL 1381
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 230/515 (44%), Gaps = 79/515 (15%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
+Y+L+ E A +N I L TG K+ I L+++ + +FL P V L
Sbjct: 46 SYELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNL--- 100
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNM 143
Q I+ +LKV +Y+G GVD W W EE SKH+VLVMTPQILLD LR ++ KL M
Sbjct: 101 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 160
Query: 144 IKVLILDECHHARGKHQYACIMTEFYHRLLE------TGDSNLPRIFGMTAS---PIKSK 194
+ +LI+DECHH G H YA +M F E T P ++ + S +K K
Sbjct: 161 VCLLIIDECHHTTGNHPYAKLMKIFNPEEREGVEKFATTVKEGPILYNPSPSCSLELKEK 220
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF-YKYDEIPHALYTHL 253
+ +S + + L+ L +S L+ F T + + Y EI H L
Sbjct: 221 LETSHLKFDASLRRLQEL--------GKDSFLNMDNKFETYQKRLSIDYREILHCL---- 268
Query: 254 ADELAMI--ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
D L +I L LE + + ++E ++ L LS +GV+L +
Sbjct: 269 -DNLGLICAHLAAEVCLEKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLV 327
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEK 371
D Q ++ V SG ++ K
Sbjct: 328 --------------------------DLQQNHLSAVISGH----------------VSPK 345
Query: 372 IVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC 431
+ L L +RG + +C+I VER+ITA V++ + + Y+ NN
Sbjct: 346 LKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKK-EASLAYLNVLYLTENNPSTNV 404
Query: 432 QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
++K Q EI + F+ G VN++ T ++EEG V C+ ++ FD +T+CS+ QS+ A+
Sbjct: 405 SAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAKQ 464
Query: 492 QNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL 526
NS ++ ++ G+ + L + MR+EVL
Sbjct: 465 SNSKSIMFLERGNPKQRDHLHDL------MRREVL 493
>gi|297610684|ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA helicase [Oryza sativa Japonica Group]
gi|31432753|gb|AAP54346.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|255679506|dbj|BAF26812.2| Os10g0485600 [Oryza sativa Japonica Group]
Length = 1458
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 261/921 (28%), Positives = 412/921 (44%), Gaps = 133/921 (14%)
Query: 15 SADTLPFARNYQL-EALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR--KPSPFVA 71
+ADT P R QL E E AL+ NTI L+TGSGKT++A+ML R +A +R + +
Sbjct: 33 TADTTP--RTSQLVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIV 90
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFL P V LV QQ E I+ +TDL V G V W WKEE+ ++E++VMTPQILL
Sbjct: 91 VFLAPTVHLVHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILL 150
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
D LR ++ ++ + +LI DECH A G H YA IM
Sbjct: 151 DALRHAFLTMSAVSLLIFDECHRACGSHPYARIM-------------------------- 184
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-----KYDEIP 246
K+Y + L +F P +T K+Y +D +
Sbjct: 185 ------------------------KIYIVEDRNELESFSPPTTIVNKYYDAYMVDFDNLK 220
Query: 247 HALYTHLADELA--MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG---- 300
L +DE ++ L+ + S + D + E RK +S+ + +LY L++LG
Sbjct: 221 SKLQI-FSDEFDSLLVGLQESPSNKFKDTDNI-LETSRKSLSRYHGKILYSLNDLGPIIT 278
Query: 301 ---VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
V + +++ + + E F+ L + + +A + +P G +
Sbjct: 279 SEVVKIHIESVKPLCDSEDCIFSKASL-----CLHMSYFKEALSLIEEILPQGYGELMKS 333
Query: 358 DSKFN--LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+S G ++ K+ LI + ++ C+IFV+R+ITA ++ + ++ C
Sbjct: 334 ESGSEELTKRGYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSC 393
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ Y+ G ++ S Q ++ FR G VN++ T + EEG+DV +C+ VI FD
Sbjct: 394 -FSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDL 452
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL-SHASLPCS 534
RTVCS++QSRGRAR NS+++LM++ G+ Q + + +G ++ L H +
Sbjct: 453 PRTVCSYVQSRGRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSY 512
Query: 535 PLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--C 592
L+ + G Y V+STG T V+LI YC +LP D YF P P F + E G+ C
Sbjct: 513 DLS--IQGMYTYQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKC 570
Query: 593 TLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHD---- 646
TL LP N Q+++ + KQ LEACKKLHQ+G L D+L+P + E D
Sbjct: 571 TLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-LTEEPMDTDFT 629
Query: 647 ----------AQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISA 696
+ E + + ++ S T TY + ++ NY
Sbjct: 630 TADEKCISGPGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENY---- 685
Query: 697 RNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRV 755
VL M EL+ ++ DL + ++ + G++QL Q+ + FQ F
Sbjct: 686 AGFVLLMEPELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNG 745
Query: 756 IMD---HNLDKLNEILD-----GFELRDNLEIDYLLLP-------STGQLIDWKTVATV- 799
I H K D G E++ N E YLLLP I W+ + +
Sbjct: 746 IFGRLFHGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCA 805
Query: 800 -----LFPRDNGSKHNMNCSTMFNAR------IVHTKSGPLCTCKIHNSLVCTPHNGQIY 848
L+ G ++ + + + R I+H + L I +S+V + H G+IY
Sbjct: 806 GAVEQLWSSYQGDENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIY 865
Query: 849 CITGVLGHLNANSLFTRNNGS 869
+ ++ A F GS
Sbjct: 866 TVLDLILDTTAEDSFDEMYGS 886
Score = 247 bits (630), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 207/379 (54%), Gaps = 25/379 (6%)
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+ +LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA
Sbjct: 910 LDILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNA 969
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGD--------NSG----------SYELNDDSL 1080
L K G + L G++R +FDP+ W+ PG N G Y +D S
Sbjct: 970 TLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSF 1029
Query: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNV 1135
F G+ G + + SKT++D VEAL+GA+ GG L + GI + V
Sbjct: 1030 FVGKPCD-RGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEV 1088
Query: 1136 PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
+ ++ ++ LE+ L Y+F LL+EA+TH S + CYQRLEFLGD+
Sbjct: 1089 KFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDS 1148
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
VLD L+T +LY + + PG LTD+RSA V+N+ +A + V++ +H H+ H S L ++I
Sbjct: 1149 VLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQIT 1208
Query: 1256 ITVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
V S E S F + PK LGDI+ES+AGA+F+D+ N ++V++ PLL P
Sbjct: 1209 EYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSP 1268
Query: 1315 MITPETMRFHPVRELTEYC 1333
+ITP+ + P REL E C
Sbjct: 1269 LITPDKLALPPYRELLELC 1287
>gi|116788280|gb|ABK24820.1| unknown [Picea sitchensis]
Length = 330
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 214/313 (68%), Gaps = 13/313 (4%)
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN-VPYQRQFQVHAE 1146
+ G + +K+K VADVVEALIGA L TGGE V L F+ +G+ +D +P+ R+
Sbjct: 18 IKGYRMMKTKNVADVVEALIGACLETGGETVALSFVKWLGMDIDIPQEMPFTRKLDTGFV 77
Query: 1147 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
VNVR+LESLL YSFR +L+VE++TH SY P CYQRLEFLGDAVLDYLIT+Y Y
Sbjct: 78 SNVNVRYLESLLKYSFRVHTLVVESVTHASYKEPSFSGCYQRLEFLGDAVLDYLITLYFY 137
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
YPGLSPG LTD+RSA+VNNDCYA ++VK LH+ + HAS EL+ +I F KL
Sbjct: 138 KTYPGLSPGLLTDLRSAAVNNDCYAQAAVKCNLHQQLRHASSELHNQIT----EFAKLIS 193
Query: 1267 GST------FGWESV-TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPE 1319
S+ FGW + + PK LGD+IES+AGA+ VDS + ++V+ +++PLLEP++TP+
Sbjct: 194 SSSASGDHFFGWTTTEVAVPKVLGDLIESIAGAVLVDSEFDTQLVWNAMKPLLEPLVTPK 253
Query: 1320 TMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKK 1379
T+++ PVREL E CQK ++ S+ G + V VEV+ G + T ++K+TAKK
Sbjct: 254 TIKYQPVRELQELCQKEFYTCCFD-DSQEEGTSTVKVEVRVKGDSYIETCEASNKRTAKK 312
Query: 1380 VACKEVLKSLRAS 1392
+A ++VLKSL+A+
Sbjct: 313 LAAEKVLKSLKAA 325
>gi|443893959|dbj|GAC71147.1| dsRNA-specific nuclease Dicer and related ribonucleases [Pseudozyma
antarctica T-34]
Length = 1764
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 370/1450 (25%), Positives = 614/1450 (42%), Gaps = 237/1450 (16%)
Query: 9 DTTEEVSADTLP-FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS 67
D ++++ D L R+YQLE + A N +V L+TGSGKTLI+++LL+ + + P
Sbjct: 242 DPSDQLRTDQLTCVPRSYQLELAQIAKSGNVLVCLDTGSGKTLISVLLLQ-HIHSQPAPP 300
Query: 68 PF------VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMG----------VDFWDGA 111
P+ V+ FLV V LV QQ+ I ++DL VGK +G++ VD W
Sbjct: 301 PYPATKRKVSFFLVNLVPLVHQQSSVIAGNSDLAVGKLYGELKEATRGRNKLTVDNWHAP 360
Query: 112 TWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHR 171
W + H+V+V T Q LD L + K++ + ++I DE HHA H + IM Y+R
Sbjct: 361 QWAALLQSHQVIVATAQCFLDALIHGFIKMSDLNLIIFDEVHHALKNHPFFRIMK--YYR 418
Query: 172 LLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS--------- 222
L P+IFGMTASPI ++ + + H L+++M+++++T +
Sbjct: 419 LAPA--DQRPKIFGMTASPIFTRSGM----FHEAAHYLQSIMDARIHTVSKAALDDLDKV 472
Query: 223 ----ESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE-LAMIELKHTRSLENLDLNEAQ 277
+ ++ F PF T DE+ ++L+ E LAM + +LE+ L+ Q
Sbjct: 473 KQKPDELVVEFAPFVT-----VLDDELGGVPLSNLSREMLAMFAVD--VALEDDQLDPVQ 525
Query: 278 AELIRKKVSKINSTLLYCLSELGV------W----LALKA-AETISCYESD-----FFAW 321
R ++ L Y + LG W L L++ A + D AW
Sbjct: 526 ----RHFRDEVQPKLEYTMRHLGAVGCDVFWHSALLELRSRARKWAVISRDKRTLVSDAW 581
Query: 322 EQLDGFGETIIKKFGSD-ASQALVTYVPSGAEWSIGDDSKFN------------------ 362
G D A + + +P GA + + S+ N
Sbjct: 582 IVDASMRSPRENGDGDDGAEEPQKSPLPLGAA-HLSNSSELNRRILLHMRAQPALPDELR 640
Query: 363 LDSGLLTEKIVCLIESLLEYR-GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY 421
+D+ + K++ L+E L + + I+FVER TA +L L+ P ++
Sbjct: 641 IDASNASPKLLRLVELLQCFEPDAANFCAIVFVERRQTATLLVKLIKRA-PGLGFIHPEF 699
Query: 422 IAGNNSG-----IQCQSRKKQNEIVEEFRR-GLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ G+++G Q +++ FRR N++VATSI EEGLD+Q+ NLVI FD
Sbjct: 700 LLGHDNGSAAGGAPAMDWHDQVQVLNRFRRRAPTNLLVATSIAEEGLDIQAANLVIRFDL 759
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDST----------TQSRLENYLASGNKMRKEV 525
SF+QSRGRAR + S ++LM +SG++ T++R +L + + +
Sbjct: 760 FNRHISFLQSRGRARARGSRFILMAESGNADHAKVILNAFDTEARRSKWLDAITESGGDG 819
Query: 526 LSHASLPCSPLNNHMY-------GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD---- 574
++ C ++ E H +TG + SL+ Y + L S+
Sbjct: 820 GDADAVLCDEWQQRLHIEPQDPDAEPAIHEPTTGARLYAEDAPSLVAHYAATLHSEHLKD 879
Query: 575 ----------GYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEA 622
TP F CTL LP+ +++V + + K K+ A L A
Sbjct: 880 AVLAYRMQCTDVLGGTPAFS-------CTLELPSTAAVRSVDSGPCSSKKRAKRMAALRA 932
Query: 623 CKKLHQIGALTDNLLPDIV---VEKHDAQKRGNEPYNAE-----HPIYFP-------PEL 667
C++L Q+G L + L+P +V V DA P++ E PI+ P
Sbjct: 933 CQQLRQLGELDEWLMPKLVGATVADRDAAPVAMNPHHKEWRGTGQPIHVPVKKMDGWARF 992
Query: 668 VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRL-T 726
+QS ++ + +H + + ++D + ++L R L + + + G +
Sbjct: 993 YSQSAKE-EAQWHATFLPMG---SFDAGYQPLLLLTRGALPATERLTLY--HAASGEMKP 1046
Query: 727 VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP- 785
+ LG + L ++ +F +F ++ D+ E L+ P
Sbjct: 1047 IRAASLGAVPLGSTELEAATQFTRFVFALLSRRESGP-----------DDGEPAVLVAPV 1095
Query: 786 ----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCT 841
+ W +A +P +T+ ++RI ++ G L N ++
Sbjct: 1096 RVADGVSDVTAWSQLA-FDWP-----------ATLESSRIDLSELGSL-----QNRVLTR 1138
Query: 842 PH---NGQIYCITGVLGHLNANSLFTRNNGSVT-----TYKKHYEERYGIQLCFDRE--- 890
H + +Y V L A S G+ T TY + +Y ++ D
Sbjct: 1139 QHGYASNALYIFQDVRHDLTAISPLPPKTGTETVDETQTYLSQHLTKYARRVNADEAAAL 1198
Query: 891 -------PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSF 943
PL+ ++ + N L+ + + + + F +P R+ P+ S
Sbjct: 1199 VTQLASTPLVAVTKLGKLTNLLTAPSRGSRAAATPVRFIIP-RFYRVF--PLRSDVLSSV 1255
Query: 944 TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLG 1003
+PSI+ R LLLA + L ++ VLEA+ + + E LE LG
Sbjct: 1256 LALPSILARYDQLLLASQCNDTLFSGALE-----VDLVLEALASPAARCGLDYERLEFLG 1310
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D+FLK A+ F T E L + + I++N L + +L + S D +
Sbjct: 1311 DTFLKLVATCHTFTTQLGRTEAELHLANKGILTNVRLLREARRLQLGRWALFASADFRAK 1370
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKK--VKSKTVADVVEALIGAFLSTGGENVGLI 1121
SG +L + V + ++ KT+ DVVEALIGA L GG + L
Sbjct: 1371 RCTAPMSGWM---GGALLQAGPVEVGPGETDVIREKTLPDVVEALIGAALLGGGTDAALH 1427
Query: 1122 FLDRIGI------KVDFVNVPYQR----QFQVHAERLVN---VRHLESLLNYSFRDPSLL 1168
+ + ++D N Q ER V+ + HL+SL + +R P L
Sbjct: 1428 VCRVLTLIPESIRRLDDFNTLLQELKLTSVTQGWERRVDRSGLDHLQSLFGHVYRYPHLG 1487
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
+EA TH S + +P YQRLEFLGDA LD I Y+++ +P LSPG LT ++ +N
Sbjct: 1488 LEAFTHPSLLASVLP-SYQRLEFLGDAWLDLYIVRYIFSAHPDLSPGELTALKGMLASNS 1546
Query: 1229 CYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV-TSFPKALGDIIE 1287
A + GLH+++ S L ++ + E G+ + W V PKAL D +E
Sbjct: 1547 TLAALGHRLGLHRYVASNSEVLVSTLSAYSTAMEGAGEGTAY-WHKVDVGVPKALADAVE 1605
Query: 1288 SLAGAIFVDS 1297
+ +I VDS
Sbjct: 1606 ASFASIVVDS 1615
>gi|357140713|ref|XP_003571908.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3b-like [Brachypodium distachyon]
Length = 1414
Score = 292 bits (747), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 251/904 (27%), Positives = 393/904 (43%), Gaps = 123/904 (13%)
Query: 25 YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR--KPSPFVAVFLVPKVVLVP 82
YQ+E E AL NTI L+TGSGKT++A+ML R + +R + VFL P V LV
Sbjct: 23 YQVEVFEAALVGNTIAVLDTGSGKTMVAVMLAREHVRRVRAGEAPRRTVVFLAPTVHLVH 82
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ E I +TDL + +G GV W WKEE+ E+ VMTPQILLD LR ++ ++
Sbjct: 83 QQFEVISEYTDLDATECYGASGVGGWSAEHWKEEVGSKEIAVMTPQILLDALRHAFVTMS 142
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
++ +LILDECH A G H Y IM
Sbjct: 143 VVSLLILDECHRACGNHPYTQIM------------------------------------- 165
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK-----YDEIPHALYTHLADEL 257
KVY S L +F P +T K+Y ++++ L +
Sbjct: 166 -------------KVYIIKDRSELESFSPPATIVNKYYDAYLVDFEDLKSKLQILFEEFD 212
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
A++ S + E RK + + + +LY L+ LG + AE + Y
Sbjct: 213 ALLVSLQESSPNKFEDTNNILETSRKSLCRYHGKILYGLNYLG---PIITAEVVKIYSES 269
Query: 318 FFAW-EQLDGF---GETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS--GLLTEK 371
A + D F G + + +A + +P G + + +S S G ++ K
Sbjct: 270 IKALGDSEDCFSKAGFNLHVSYFKEALDLIQEVLPQGYDELMKSESGSAELSKRGYISSK 329
Query: 372 IVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC 431
+ LI + ++ C+IFVER++TA ++ + ++ + Y+ G ++
Sbjct: 330 VDTLINIFKSFGSSNEVLCLIFVERIMTAKAVERFMRGIV-NFSRFSISYLTGGSTSKDA 388
Query: 432 QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
S Q ++ FR G VN++ T + EEG+DV +C+ VI FD RTV S++QSRGRAR
Sbjct: 389 LSPAVQQFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVSSYVQSRGRARK 448
Query: 492 QNSDYLLMVKSGDSTTQSRL------ENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF 545
+S+Y+LM++ G+ Q ++ E Y+ R+ +S LP M +
Sbjct: 449 SSSNYVLMIERGNMEQQEQIFRIIQTEYYIKHFALYRRANVSSYDLP-------MQDKHT 501
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQ 603
YHV+STG T V+LI YC +LP D Y+ P P + + E G CTL LP N Q
Sbjct: 502 YHVDSTGATITAECCVNLIRKYCEKLPKDRYYMPKPSYEMAVEDGSYQCTLILPPNAAFQ 561
Query: 604 TVI----AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEP----- 654
+I + GN+ KQ LEACKKLHQ+G L D+L+P R NE
Sbjct: 562 RIIGPSCSTGNLA--KQLVSLEACKKLHQLGELDDHLVPLTEGPMDIGNSRTNEKCISGP 619
Query: 655 -YNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARN---IVLAMRTELESE 710
++ ++ + T + + L + F D N VL M + L+ +
Sbjct: 620 GTTKRKELHGTTSVLALTGTWTHESENVSLNAYRFDFRCDQEGENYAGFVLLMESALDDD 679
Query: 711 IKKVNFDLEVERGRLT-VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDH--------NL 761
+ DL + ++ + G+IQL Q+ + FQ F I +
Sbjct: 680 VACSKMDLFLIPNKMVYTTITPCGKIQLNKKQLREGKLFQEFFFNGIFGRLFHGSRTSGV 739
Query: 762 DKLNEILDGFELRDNLEIDYLLLP-------STGQLIDWKTVATV---------LFPRDN 805
+ G+E++ + E YLLLP I+W+ + ++ D
Sbjct: 740 QREFIFRKGYEIQWSSESMYLLLPLCYSSHIQHDLSINWEAIGFCTDALEQLRNMYTEDG 799
Query: 806 GSKHN-MNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFT 864
N + C ++ ++H + L I +S+V + H G+IY + ++ A F
Sbjct: 800 NLHANFIQCRSIKGEDMIHMANKSLRVSSIKDSVVLSLHTGRIYSVLDLIIDTTAEDSFD 859
Query: 865 RNNG 868
G
Sbjct: 860 EMYG 863
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 205/379 (54%), Gaps = 25/379 (6%)
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
I +LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA
Sbjct: 888 IDILEAITTLRCCETFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNA 947
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS------------------GSYELNDDSL 1080
L K G + L G+IR +FDP+ W+ PG S G Y + DD
Sbjct: 948 KLHKHGVWRSLQGYIRDSAFDPRRWVAPGQISLRPFPCNCGIETSFVPTNGMY-IRDDPS 1006
Query: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNV 1135
F K G + + SKT++D VEAL+GA+ GG L + GI++ V
Sbjct: 1007 FVVGKPCDKGHRWMCSKTISDCVEALVGAYYVGGGIIAALWVMRWFGIEIKCDRKLVQEV 1066
Query: 1136 PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
+ + + ++ LE L Y+F LL+EA+TH S + CYQRLEFLGD
Sbjct: 1067 KLNASYICYLPKTNDIDELEVKLKYNFSVKGLLLEAITHPSAQESGVDYCYQRLEFLGDC 1126
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
VLD LIT YLY + + PG LTD+RSA V+N+ +A + V++ +H H+ H S L ++I
Sbjct: 1127 VLDLLITQYLYVTHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGVLLEQIT 1186
Query: 1256 ITVD-SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
V + E + F S PK LGDI+ES+AGAIF+D+ N ++++ + PLL P
Sbjct: 1187 EYVRFNLECQGKENEFLQHSTCKVPKVLGDIMESIAGAIFIDTDFNVDLLWNIVEPLLSP 1246
Query: 1315 MITPETMRFHPVRELTEYC 1333
MITPE + P REL E C
Sbjct: 1247 MITPENLALPPYRELLELC 1265
>gi|297815500|ref|XP_002875633.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
gi|297321471|gb|EFH51892.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
Length = 1521
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 232/766 (30%), Positives = 364/766 (47%), Gaps = 95/766 (12%)
Query: 701 LAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN 760
L + + L ++ V DL + R + ++ G+I+L +++ + FQ F +
Sbjct: 624 LLLESTLAEDVGNVEMDLYLVRKLVKASVSPCGQIRLSQEELVKGKYFQQFFFNGMFGKL 683
Query: 761 LDKLNEILDGFELRDNLEID----------YLLLP------STGQLIDWKTV----ATVL 800
+ G + L+ D +LLLP ++ IDW + + V
Sbjct: 684 F--VGSKSQGTKREFLLQTDTSSLWHPSFMFLLLPVETKDLASSATIDWSAINSCASIVE 741
Query: 801 FPRDN---------GSKHNMNCST-------MFNARIVHTKSGPLCTCKIHNSLVCTPHN 844
F + N G++ N + M ++H + + +V H
Sbjct: 742 FLKKNSLLELQVSDGNQCNTSSDQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHT 801
Query: 845 GQIYCITGVLGHLNANSLFTRNNGS-VTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQN 903
G+IY I + +A S F + S TY +++ ++YGI L +PL+ ++ H N
Sbjct: 802 GRIYSIVEAVRDSSALSPFECDASSEYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHN 861
Query: 904 YL------------SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
L K ++K+P+ I LPPEL I P ++ S +PS+MH
Sbjct: 862 LLVDFNEEMVVKAEPKAGNVRKKKPN-IHAHLPPELLARIDVPRAV--LKSIYLLPSVMH 918
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
RL+SL+LA L+ + D + N +I + +LEA+TT C E F +E LE LGDS LKY A
Sbjct: 919 RLESLMLASQLREEI-DCSIDNFSISSTSILEAVTTLTCPEAFSMERLELLGDSVLKYVA 977
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS- 1070
S LF Y + EG LS +++ IISN+ L +L +KL G+IR +F+P+ W PG S
Sbjct: 978 SCYLFLKYPDKDEGQLSRQRQSIISNSNLHRLATNRKLQGYIRNGAFEPRRWTAPGQFSL 1037
Query: 1071 ---------GSYELNDDSLFNGRKIYVT-------GRKKVKSKTVADVVEALIGAFLSTG 1114
+ E+ D F + + G + SK+V+D EALIGA+ +G
Sbjct: 1038 FPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWTVSKSVSDCAEALIGAYYVSG 1097
Query: 1115 GENVGLIFLDRIGIKVDF-----VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLV 1169
G L + +G+ VDF V + + + + + LE + + F LL
Sbjct: 1098 GLTASLHMMKWLGVNVDFDPNLVVEAISRVSLRCYIPKDDELTELERKIQHEFSAKFLLK 1157
Query: 1170 EALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDC 1229
EA+TH S Y+RLEFLGD+VLD+LIT +L+N Y PG +TD+RSA VNN+
Sbjct: 1158 EAITHSSV---HESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNEN 1214
Query: 1230 YALSSVKHGLHKHILHASHELYKRINITVDSFEK-----LSLGSTFGWESVTSFPKALGD 1284
+A +VK+ LH H+ + L +IN + SF+K S+ S G PKALGD
Sbjct: 1215 FAQVAVKNNLHIHLQRCATVLENQINEYLMSFQKPDETGRSIPSIQG-------PKALGD 1267
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK-NHFSMKKP 1343
++ES+AGA+ +D+ + + V++ PLL P++TP+ ++ P REL E C +F +K
Sbjct: 1268 VVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFREK- 1326
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
S KA T+ +Q L + K A A +L L
Sbjct: 1327 -CSNDGVKAQATIHLQLGDVLLTGDGSEQTNKLALGKAASHLLTQL 1371
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 257/552 (46%), Gaps = 78/552 (14%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
+Y+L+ E A +N I L TG K++I ML+++ + +FL P V +
Sbjct: 35 SYELKVYEVAKNRNIIAVLGTGIDKSVITKMLIKAMG--CSDTDKRLIIFLAPTVNI--- 89
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV-LVMTPQILLDGLRLSYFKLN 142
Q I+ +LKV +Y+G GVD W W EE+SKH+V LVMTPQILLD LR ++ KL
Sbjct: 90 QCCEIRAQVNLKVEEYFGAKGVDKWTSQRWDEEVSKHDVSLVMTPQILLDALRSAFLKLE 149
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
M+ +LILDECH G H YA +M +IF +S E
Sbjct: 150 MVCLLILDECHRTTGNHPYAKLM----------------KIF-----------NSEEGKG 182
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIEL 262
+K +++V I + + F+ + E + L ++
Sbjct: 183 VEKF---------------AKAVKEGPIFYDPSPFRSLELKEKLETSHLKFDTSLRRLQE 227
Query: 263 KHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWE 322
S N+D + E +K++S +L+CL LG+ A AAE C E E
Sbjct: 228 LEKGSFLNID---NKFETYQKRLSIDYKEILHCLDNLGLICAHLAAEV--CLEKISDTKE 282
Query: 323 QLDGFGE--TIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN----LDSGLLTEKIVCLI 376
+ + + E + K+F D + Y+ G + S+ D + N ++SG ++ K+ L
Sbjct: 283 ESETYKEWSMVCKEFLEDILSTIGVYLQQGDKNSV--DLQQNRLSAVNSGHVSPKLKELF 340
Query: 377 ESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK 436
L +RG + +C+I VER+ITA V++ + + Y+ GNN ++K
Sbjct: 341 HLLDSFRGEKQKQCLILVERIITAEVIERFVKK-EASLSYLNVLYLVGNNLSTNASAQKT 399
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q EI F G VN++ T +EEG V +C+ ++ FD +TVCS+ QS+ A+ NS
Sbjct: 400 QIEIPNLFHEGKVNLLFITDAVEEGFQVPNCSCMVCFDLPKTVCSYSQSQEHAKQSNSKS 459
Query: 497 LLMVKSGDSTTQSRLENYLASGNKMRKEV-LSHASLP----CSPLNNHMYGEDFYHVEST 551
++ ++ G+ + L + MR+EV + P C P + +G V+
Sbjct: 460 IMFLERGNPKQRDHLYDL------MRREVPIRDPEAPNLKSCPPPVTNAHG-----VKEI 508
Query: 552 GTIATLSSSVSL 563
GT+ S++++
Sbjct: 509 GTMVIPDSNITV 520
>gi|158706455|sp|Q2H0G2.2|DCL1_CHAGB RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1607
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 369/1443 (25%), Positives = 586/1443 (40%), Gaps = 260/1443 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQLE E A QNTI L+TGSGKTLIA +LLR ++ +A FLV K
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDM----GVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
V LV QQ + + D + K+ GDM DFW T+ E M+ +V T +IL
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDVTQDFWH-KTFDENMA----IVCTAEILYQC 250
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L SY +++ + +L+ DE HH + H YA I+ +FY + + + L MTASP+ +
Sbjct: 251 LTHSYIRMDQVNLLVFDEAHHTKKNHPYARIIKDFYAEVKDL-NKRLRISRAMTASPVDA 309
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
++ + +LE L++S++ T A + L N S+ K K +
Sbjct: 310 QIDPK----IARSPELEGLLHSQIATVADPTALHN----SSTKLK--------REVTVEY 353
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
L E R+L++L + L +K + + SELG W A +
Sbjct: 354 GKCLPEFETGLNRALKDL---VGEHRLFQKPFAFTATAA----SELGPWCADR------- 399
Query: 314 YESDFFAWEQ---LDGFGE-TIIKKFGSDASQALVTYVPSGAEWS--IGDDSKFNLDSGL 367
Y FF E+ L+ E I++K S SQ + V E +G + S L
Sbjct: 400 YWQLFFRGEEVVKLEAKTEREILRK--SAYSQEIAAQVNKVREAHRLVGQHEFASPSSDL 457
Query: 368 LTEKIVCLIESLL-EYRGVE-DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG- 424
L+ K+V L+ L E+RGV+ RCI+FV + A +L LL + R + + G
Sbjct: 458 LSSKVVILLRILRGEFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGLEPGILVGG 517
Query: 425 -------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+N+ + + + Q + +F++G +N I ATS+ EEGLD+ CN++I +D +
Sbjct: 518 GRPEASYDNAKV---TYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNN 574
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSP 535
T+ +IQSRGRAR + S Y+ MV+S + ++ S + +RK E L P
Sbjct: 575 TLIQYIQSRGRARQEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEAL--------P 626
Query: 536 LNNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
+ + G +F Y V TG S+ + + + LP T
Sbjct: 627 ADRKLTGNNFDMEYFLRKEKDQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTA 686
Query: 582 KFHINKEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLL 637
+ + G C + LP + PI++ + + K +A E C L + L +L
Sbjct: 687 GYLVLSVPGGYQCEVTLPESSPIRSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLR 746
Query: 638 PDIVVE---KHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDI 694
P + +A+ + ++ + PEL + + T++ + L
Sbjct: 747 PTFTKQLPAMRNARLAVSSKKKEQYKMRIKPELWSVLGEPTEL--FAMALTLADPTALAR 804
Query: 695 SARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQV------------ 742
+ ++L R + +I R + GR++L NQ+
Sbjct: 805 HSSPLLLLTRQPI-PQIASFPLYFGKNRSSAVHCVPVPGRVELDDNQIQGLVAVTLAIFK 863
Query: 743 -LLCRRFQIT-------LFRVIMDHNLD-----KLNEILDGFE---LRDNLEIDYLLLPS 786
+ + ++ T L +M H D L+ I+D +RDN + Y L
Sbjct: 864 DIFSKEYEATAAQLPYFLAPTLMQHGSDFTSVTDLSRIVDWGAVTFVRDNERVAYALDDE 923
Query: 787 TGQLIDWKTVATVLFPRDN-------GSKHNMNCSTMFNARIVHTKSGPL-CTCKIHNSL 838
+ K VA P D G +H+M + M IV +CK H+ L
Sbjct: 924 ADEFFKNKYVAD---PYDGSRKFFLRGRRHDMKPTDMVPEGIVTPGHRAWRVSCKTHDIL 980
Query: 839 VCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRI 898
N S++ + K + +P++ +
Sbjct: 981 ----------------------------NYSLSAWSKS----RAFLTPREDQPVVEAEVL 1008
Query: 899 FHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISL-STFYSFTFVPSIMHRLQSLL 957
+N L EP L P RI P+ L + Y+F P+IMHR+ S L
Sbjct: 1009 PIRRNLLDDHIGDDDLEPKPCFIVLEP--LRISPLPVDLVAMAYNF---PAIMHRIDSNL 1063
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH--------------LESLETLG 1003
+A+ ML N+ + LEA T H E LE LG
Sbjct: 1064 VALEACKML------NLNVRPDLALEAFTKDSDNSGEHDAEQISFQSGMGNNYERLEFLG 1117
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D FLK A + +F + E V++ +I N L E KL IR+ +FD + W
Sbjct: 1118 DCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALEVKLEEHIRSMAFDRRSW 1177
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN------ 1117
G +L G++ +T + + KT+ADV EALIGA T E
Sbjct: 1178 YPEG----------LTLKKGKRKDLTRQHVLADKTIADVCEALIGAAYLTAQEQTPPNFD 1227
Query: 1118 -----VGLIFLDRIGIKVDFVNV------PYQRQFQVHAERLVNVRHLESLLNYSFRDPS 1166
V ++ D+ + + P + ++ +L E+ + Y+F P
Sbjct: 1228 LAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAWQTAPCNSTQLDMAARFEARMGYAFTHPR 1287
Query: 1167 LLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
LL A H +Y + ++P YQRLEFLGDA+LD +L++++PG P +LT+ + A
Sbjct: 1288 LLRSAFQHPTYPSVYEKLP-SYQRLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAM 1346
Query: 1225 VNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL-------------------- 1264
V+N +V G H+ I + + + K I V E
Sbjct: 1347 VSNQFLGCLAVYLGFHRAISYCASAIQKEITEYVTEIEDALQSARDDASKTPCNRHATTP 1406
Query: 1265 --------SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRPLL 1312
S F W + PK L D++E+ GA+FVDS + R +RP
Sbjct: 1407 SPGDLPAESFARDF-WVRCSRPPKCLPDVVEAYVGAVFVDSRYDFARVRAFFADHVRPFF 1465
Query: 1313 EPM 1315
E M
Sbjct: 1466 EDM 1468
>gi|242076428|ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
gi|241939333|gb|EES12478.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
Length = 698
Score = 286 bits (731), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 267/486 (54%), Gaps = 20/486 (4%)
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
ELPPELC + + S S + +PS+M RL++LL+A+ LKN++ + + I +
Sbjct: 6 ELPPELCSLKITGFSKDMGSSLSLLPSLMCRLENLLVAIELKNVMSSYFPEASQISASGI 65
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
LEA+TT++C E LE LE LGD+FLKY + F +Y+ EG L+ ++ I+SN+ L
Sbjct: 66 LEALTTERCLERISLERLEVLGDAFLKYVVGRHNFISYEGLDEGQLTRRRSDIVSNSNLY 125
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPG---------DNSGSY---ELNDDSLFNGRKIYVT 1089
+L + L +IR + F+P + G D + ++ D N
Sbjct: 126 ELSIRRNLQVYIRDQHFEPTQFFALGRPCKVVCNPDREATLHPKNIDPDRRENCNLRCTK 185
Query: 1090 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL- 1148
+ KT+ADVVE+L+GAFL G FL IGIKVDF N R + L
Sbjct: 186 SHHWLHRKTIADVVESLLGAFLVECGFKAAFAFLRWIGIKVDFENSALYRVLDASSTNLS 245
Query: 1149 ----VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
+N+ LE L+ Y+F+ LL++A H S+ CYQR+EFLGDAVLDYL+ Y
Sbjct: 246 LMNYMNISELEELIGYTFKHKGLLLQAFVHPSFN-KHSGGCYQRMEFLGDAVLDYLMASY 304
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY+ YP L PG LTD++S ++NN+ +A +VK +HK+++ S L IN ++ L
Sbjct: 305 LYSAYPDLKPGQLTDLKSLALNNNSFAYVAVKKSIHKYLIKDSKSLTAAIN-KFQNYVNL 363
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFH 1324
S E T PK LGDI+ES GA+ +DSG N V++ + LL+P+++ M
Sbjct: 364 SSSEKDLLEEPTC-PKVLGDIVESCVGAVLLDSGFNLNHVWKLMLMLLKPILSFCGMHID 422
Query: 1325 PVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKE 1384
P+REL E CQ N F + P + +G+ V VEV +G++ T + + K A+KVA +E
Sbjct: 423 PMRELREICQYNGFELGLPKPTEDNGEFHVKVEVNIDGKMISCTAANRNSKDARKVAAQE 482
Query: 1385 VLKSLR 1390
L L+
Sbjct: 483 ALLKLK 488
>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
Gv29-8]
Length = 1373
Score = 279 bits (713), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 330/1392 (23%), Positives = 561/1392 (40%), Gaps = 247/1392 (17%)
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
+A FLV KV L QQ + + + +GK++G+M W + +++ V T QI
Sbjct: 20 IAFFLVEKVALCFQQHAVLTTNLEFPIGKFFGEMTGVVRSQEYWDRQFAENMAFVCTAQI 79
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
LLD L + + I +++ DE HHA+ H YA I+ + Y R PRI GMTAS
Sbjct: 80 LLDLLACGFISMGQINLMVFDEAHHAKKSHPYARIIKDHYLR----SRDERPRILGMTAS 135
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL 249
P V + +D +LE+++ SK+ T + E+++ N P
Sbjct: 136 P----VDALTKDVRYAAAELESMLCSKIATISDEALMQN-----------------PEFS 174
Query: 250 YTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
T L D ++ + + +L+ + + + LG W A + +
Sbjct: 175 KTRLCDLISRCVRSNPQFRRHLEFAASASSI------------------LGTWCADRYWQ 216
Query: 310 TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN---LDSG 366
++ +++ E G + D + A + V I D F S
Sbjct: 217 LLTT-DNEMLRIEARTGRDNLELDVSAGDEAMAAIAKVKG-----IIRDHVFGPIQAGSP 270
Query: 367 LLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
L+ K+ L E L + + + RCI+FVE TA +L L + K Y+ G+
Sbjct: 271 ELSSKVKTLYEVLEDAFCKRQAKRCIVFVEARSTAFLLADLFQQPGMEIPGMKAAYMIGS 330
Query: 426 NSGIQC---QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
++ S + Q +++FR G N + ATS+ EEG+D+ C+++I FD + +
Sbjct: 331 HTSTASAAYMSYRDQIMSLQKFRYGETNCLFATSVAEEGIDIPECDVIIRFDLYTSAIQY 390
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYG 542
IQS+GRAR ++S Y+ M++ G+ +L + +R+ CS L
Sbjct: 391 IQSKGRARQKSSLYVSMMEEGNLEHMRKLRRATRDAHALRQF--------CSALPEDRKV 442
Query: 543 EDF-----------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
DF Y V TG T +S+ ++ Y S P++ P +I
Sbjct: 443 PDFVIGPDVLAAQEQVTQKRYTVAGTGAQLTFITSLEVLAKYASSFPNNAIDGLLPLEYI 502
Query: 586 NKEMG---ICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGA--LTDNL 636
+G + + LP+ PI+ + G ++ KQ +A EAC +H IG + NL
Sbjct: 503 VTSIGKKFVARVILPDASPIK--MFPGEVQKSKQLARCSAAFEAC--VHLIGKKYINGNL 558
Query: 637 LPDI---VVEKHDAQKRGNEPYNAEHPIYFPPELVNQ--SPQDTKITYHCYLIELKQHFN 691
P + + +A+ + +E+ + P+ + +P+ Y +I L Q
Sbjct: 559 QPAFTKKLPDMRNARLALSSDKKSEYDMRIKPDFWSSCLAPEPPTSLYQT-IIALDQPEA 617
Query: 692 YDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQIT 751
++R ++L R L +I + + +++P+++ F +
Sbjct: 618 LGRASRPLILLTRKPL-PDIPSTPLFFGGGQTSIMRLSNSQTSFEVLPHEIEALASFTLR 676
Query: 752 LFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST-------GQLIDWKTVATVLFPRD 804
LF + D + EI Y + PS IDW+ V + D
Sbjct: 677 LFADVFSKEYDAKSH-----------EIPYFVAPSKLSPSRGDDAEIDWEAVQ---YAHD 722
Query: 805 NGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNG-QIYCITGVLGHLNAN--- 860
N N + F + L P +G + + + G+ L +
Sbjct: 723 NEQLRWENAPSEF----------------FKDKLATDPWDGSRKFILHGINAELKPSDPT 766
Query: 861 --------SLFTRNNGSVTTYKKHYEERYGIQLCFDR-----EPLLNGRRIFHVQNYLSK 907
SL R V K Y I+ R +P++N + +N+L +
Sbjct: 767 PKGVPQPKSLGYRK---VEQNIKEYSNSLSIKSRQRRNWRNDQPVVNAELLPIRRNFLDE 823
Query: 908 CRQQKQKEPSKISFELPPELCRIIMAPISLSTF----YSFTFV-PSIMHRLQSLLLAVNL 962
+ + + C +I+ P+ +S S V P +++R+ S+L+A+
Sbjct: 824 FFVDDECDGT----------CYVILEPLRVSPIPVDVVSIALVLPVVIYRVDSVLIALET 873
Query: 963 KNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH--------------LESLETLGDSFLK 1008
++ ++ I + LEA+T + H E LE LGD+FLK
Sbjct: 874 CSLF------DLAICSDLALEAVTKDSFNTEEHGEHQIDFQPGMGKNYERLEFLGDTFLK 927
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD 1068
A + ++ + E V + ++ N L + E+ +P +IRT++FD + W
Sbjct: 928 MATTISVYTIAPDADEFHYHVGRMMMLCNKNLFEHAVEKGMPAYIRTKAFDRRTW----- 982
Query: 1069 NSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIG 1127
Y N +L G+ + + K++ADV EALIGA ++++ EN+ +
Sbjct: 983 ----YPSNM-TLKRGKAARTETKHCLSHKSIADVCEALIGAAYMTSTTENMDMAVKAVTA 1037
Query: 1128 IKV----------DFV---NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTH 1174
+ D+ VP V A + + V + + Y F+ L A H
Sbjct: 1038 MVCSEHHTMLEYKDYFATFQVPKWHGNHVSAAQRLTVDKVAEITGYRFQCAPLARSAFRH 1097
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY+ YQ+LEFLGD +LD + +L+ ++P P +LT+ ++A V+N
Sbjct: 1098 PSYVFETNIPDYQQLEFLGDGLLDMAVVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLC 1157
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKL-----------SLGSTFG------------ 1271
VK GLHKHIL A+ L I E+ LG T G
Sbjct: 1158 VKLGLHKHILLATSALLGDIGRYATQLEQAEEIARQKSQGGDLGYTSGGCFQAGAQPTPQ 1217
Query: 1272 --WESVTSFPKALGDIIESLAGAIFVDSGCNREVVF----QSIRPLLEPMITPETMRF-H 1324
W V PKAL D++E+L GA+FVDSG + VV + I+P E M + H
Sbjct: 1218 DFWIEVPQPPKALADVVEALVGAMFVDSGYSFSVVLNFFTKFIQPFFEDMALYSSFASNH 1277
Query: 1325 PVRELTEYCQKN 1336
PV L Q +
Sbjct: 1278 PVTALAHRLQTD 1289
>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
Length = 1529
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 227/764 (29%), Positives = 361/764 (47%), Gaps = 128/764 (16%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA 60
+E ++ E ++ E A R YQ E + A+ +NTI L+TG+GKTLIA+ML++
Sbjct: 18 VEHINQEKKSSLETVAGATLEPREYQYEIFKKAVSENTIAVLDTGAGKTLIAVMLIKHML 77
Query: 61 YLLRKP-------SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATW 113
L R+ V FLV +V LV QQA I+ + D +V + GDM VD W TW
Sbjct: 78 ALEREKLQANRDYRRKVTFFLVDRVHLVFQQASVIRANCDAQVKELCGDMNVDAWKADTW 137
Query: 114 KEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLL 173
E +++ V+T QI LD LR + L+ + +++ DECHHA H + IM EFYHR+
Sbjct: 138 TEIWDNNDICVLTAQIFLDNLRSGFLTLDRVNIMVFDECHHASKGHPFNLIMIEFYHRIY 197
Query: 174 ETGDS---NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI 230
+ + + P+IFGMTASPI + S + + I LET + S VYT S L++ +
Sbjct: 198 DNPVNQALDKPKIFGMTASPIHT----SSKKVLESISTLETSLQSIVYTAKSTQELASAV 253
Query: 231 --PFSTAKFKFYKYD---EIP----HALYTHLADELAMIELKHTRSLENLDLNEAQAELI 281
PF T F Y D ++P HA ++ E ++ RS+ LI
Sbjct: 254 KKPFETELF--YSMDVINDVPPSPVHAARDYIRRE------RYQRSI--------LTTLI 297
Query: 282 RKKVSKIN------STLLYCLSELGVWLA-------LKAAETISCYESDFFAWEQ-LDGF 327
K++++ + ++Y + LG W + L A T + + EQ L
Sbjct: 298 TNKINQVTGFQQCLNAIIYISNNLGPWCSDRLWKSILYKANTKGLFTPTLYTPEQKLSNE 357
Query: 328 GETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVED 387
+ +++ +A + + E + ++ +F + +L + CL + L +
Sbjct: 358 DQQLLQ----EAYELCSITDNNTTEPDLTNERQFTPKARVLVD---CLKDILANDANKQG 410
Query: 388 IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN--SGIQCQSR-KKQNEIVEEF 444
IIFV+R TA+ ++ L+ + + + G+ SG Q + KQNE++ +F
Sbjct: 411 FCGIIFVDRRHTAVAIKILIESISVFKEDIRCDVLIGHGVKSGGDLQMKYTKQNEVIAKF 470
Query: 445 RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
R G +N+++AT++ EEGLD+Q+CN VI FD +TV ++IQSRGRAR ++S Y+LM+ +
Sbjct: 471 RAGELNLLIATNVAEEGLDIQACNYVIRFDLFKTVIAYIQSRGRARRKDSKYILMLNRQN 530
Query: 505 STTQSRLENYLASGNKM----------RKEVLSHASLPCSPLNNH-----------MYGE 543
S L N + + M R + SP + Y +
Sbjct: 531 LKDMSLLRNVVRAEEMMKDYCRMLPKDRNPAVMFDDASGSPGTEYHPEYIKQGLSDKYLQ 590
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY--FKPTPKFHINKEMGI---------- 591
D + +ESTG + T S++++LIY YC+ LPSD + FKP ++ G+
Sbjct: 591 DAFCIESTGALLTRSNAIALIYHYCATLPSDNFCNFKPVYEYEDLTNYGLSLEEIEALDL 650
Query: 592 ----------------CTLYLPNNCPIQTVIAQGNIKTLKQA-ACLEACKKLHQIGALTD 634
CTL LP N IQ A K +A L+AC L++ G +
Sbjct: 651 PSINPTTVAGKKNIFGCTLTLPINARIQQFRAYDRAKDDAKARVSLQACVALYKAGDIDS 710
Query: 635 NLLP----------DIVVEKHDAQK----RGNEP-YNAEHPIYF 663
+L+P D+ EK D K RG E Y + P+++
Sbjct: 711 HLVPKSKTQRRVLMDLAEEKDDNGKLIGSRGRENLYKKKQPLFW 754
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 261/513 (50%), Gaps = 65/513 (12%)
Query: 871 TTYKKHYEERYGI--QLCFDREPLLNGRRIFHVQNYL----SKCRQQKQKEPSKISFELP 924
T+K +YE++ + ++ +PL+ R+ Q++ S +++ +EP + L
Sbjct: 954 ATFKDYYEDQEFLSKKITDMAQPLIQVHRVPKNQSFRQVRGSSMMKKRDREPESVVHWLV 1013
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML-LDHCMQNVTIPTIKVLE 983
PELC + PIS S + + VP IM + ++LL + K L L M++ + LE
Sbjct: 1014 PELC--LQYPISASVYQTLQLVPDIMMHIDAVLLMHDAKKALGLSGRMKDPYM-----LE 1066
Query: 984 AITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKL 1043
A T + + LE LGDS LK+ S +F T ++E L+ + R+ISN AL K
Sbjct: 1067 AFTASSAGLEKDYQRLEFLGDSVLKFITSTYVFVTLPISNEFELTESRMRMISNTALFKS 1126
Query: 1044 GCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVV 1103
+ +L +I +++ + + P +Y DDS I K+ KT+ADVV
Sbjct: 1127 AIQLRLYEYICSQNLPRRFYRPP-----NYLCKDDS---AEMIKSLTYHKLSDKTLADVV 1178
Query: 1104 EALIGA-FLSTGGE--------NVGLIFLDRIGIKV-------DFVNVPYQ-----RQFQ 1142
E+ +GA +LS G+ N L R+ + + DF + Y+ +Q +
Sbjct: 1179 ESTLGASYLSCLGDKKQGDQALNEALHTTQRLLVPMQKMEQWSDFQTI-YRDERDNKQLK 1237
Query: 1143 VHA-----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
+ A ++ ++++ + +L Y F++ +L+ EALTH S +P CYQRLEFLGDAVL
Sbjct: 1238 MAAYDPLFDQRIDIKKVSRILGYEFQNEALIAEALTHASVTNSSVP-CYQRLEFLGDAVL 1296
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
D+ +T YL+ KY PG L D+R +SVNND ++ ++ GLH HI H S
Sbjct: 1297 DFCVTNYLFEKYHTAPPGTLHDLRKSSVNNDILSVLCIQLGLHVHIRHFSTTFPS----A 1352
Query: 1258 VDSFEKLSLGSTFG----WESVTSFPKALGDIIESLAGAIFVDSGCNREVVF----QSIR 1309
V F++L + S W + PK L D++ESL GA+FVD+G N + V + ++
Sbjct: 1353 VKQFQELVVASQDEKGEYWLNFNP-PKVLSDVVESLIGAVFVDAGFNLDPVLGLFDRLLK 1411
Query: 1310 PLLEPMITPETMRFHPVRELTEYCQKNHFSMKK 1342
PLL+ I+ E M+ HP+ +L C F K+
Sbjct: 1412 PLLDDHISIEAMQQHPLGKLK--CMVQEFGCKQ 1442
>gi|350630584|gb|EHA18956.1| hypothetical protein ASPNIDRAFT_42773 [Aspergillus niger ATCC 1015]
Length = 1498
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 347/1392 (24%), Positives = 558/1392 (40%), Gaps = 222/1392 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE E A QNTI L+T + KP +A FLV V L
Sbjct: 118 REYQLELFERAKVQNTIAVLDTEKELN----------DRVEGKPHR-IAFFLVDSVTLAY 166
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA ++ + D VG ++G MG D W + W + K+ V+V T +IL L SY K++
Sbjct: 167 QQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNSYIKMS 226
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +LI DE HH + H YA I+ + Y LE S PRIFGMTASPI +K D
Sbjct: 227 QINILIFDEAHHTKKDHPYARIIRDSY---LEEVYSKRPRIFGMTASPIDTK-----GDI 278
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA--LYTHLADELAMI 260
+ LE L++S++ T ++ S+L + + + E P A LY HL D +
Sbjct: 279 VDEATRLEKLLDSRIATTSNMSLLRQVVRRPVERVWSFNKLEQPFATSLYKHLEDRFGDM 338
Query: 261 ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFA 320
LE + QA SELG W + +A + A
Sbjct: 339 A-----CLEGIFRFAWQAS-----------------SELGRWCSDRAW-------ARALA 369
Query: 321 WEQLDGFGETIIKKFGSDASQALVTYVPSGA---------------EWSIGDDSKFNLDS 365
+ L ++ K S+ S + VP A ++ F
Sbjct: 370 DDVLPKLEGSVRKTANSETS----SNVPESAYKEILRITEASEIVKSYAFSSPETF---- 421
Query: 366 GLLTEKIVCLIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSEL-LP-RHCTWKTKYI 422
G L+ K+ L E L Y G + + +CI+F ++ TA++L L L +P
Sbjct: 422 GQLSPKVQVLREELARYFGRQTETKCIVFTQKRYTALILAELFQTLDIPFLRPGVLIGVR 481
Query: 423 AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
+G+ +G+ R++ +V+ FR G +N +V T I + L+I + S
Sbjct: 482 SGDLAGMNITFRQQFISLVK-FRTGEINCLVNTHIC-----LPVYQLLINY------ASM 529
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTTQSRL----ENYLASGNKMRKEVLSHASLPCSPLNN 538
++ R +++ LL V+ + QS E+ L G + +
Sbjct: 530 VE---RGNLEHEQRLLEVQDAEKIMQSFCRTLPEDRLLYGFDHDLDTVLQKD-------- 578
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYL 596
G + ++STG T S+ +++ Y S L + F + + G +C + L
Sbjct: 579 --EGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGAFVCEVIL 636
Query: 597 PNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNL-------LPDIVVEKHDA 647
P PI+ + +K K++A + C L + L D+ LP + +A
Sbjct: 637 PEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHFNSIYHRRLPAM----RNA 692
Query: 648 QKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTEL 707
+ +++ + P L + H I ++L R L
Sbjct: 693 KLAITSKRTSQYDMISKPSLWGRKQGMPPKELHGTFITFLPSMQLSHEPAPLLLFTRERL 752
Query: 708 ESEIK-KVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNE 766
+ + D +VE +T L+ ++ L +V F + +FR + DK E
Sbjct: 753 PHFPEFPIFLDDDVETTIITTPLEK--QLLLSEKEVDALTVFTLRVFRDVFHKTYDKEPE 810
Query: 767 ILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGS---KHNMNCSTMFNARIVH 823
+ + ++ YL Q++DW+++ V RDN S N + + + +
Sbjct: 811 KMAYWLAPAKVQSSYLPSYDPRQILDWESLTYV---RDNDSIPFSTNADPESWVDLFVFD 867
Query: 824 TKSGP--LCTCKIHNSLVCTPHNGQIYCITGVLGHLN--ANSLFTRNNGSVTTYKKHYEE 879
G T + +SL + H+N N + + S +
Sbjct: 868 AWDGRCRFFTVGVEHSLTPS---SPPPPFVARRRHMNDVMNYCLSLSKNSRAKF------ 918
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLST 939
+ C +P+L + +N L K ++ ++ + P + ++ I ST
Sbjct: 919 ---LSTCHWDQPVLRAELVRLRRNLLDKMTDTERDVETRCFICIEP----LKVSAIPAST 971
Query: 940 FYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH---- 995
+S P+I+ R+ + L+++ L N T+ LEA T D H
Sbjct: 972 AFSCLAFPAIISRIDAYLISLQGCESL------NFTVKLDLALEAFTKDSDNTDEHRAQQ 1025
Query: 996 ----------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGC 1045
E LE LGD FLK A S LF ++ E V + +I N L
Sbjct: 1026 IHVQRGMGRNYERLEFLGDCFLKMATSISLFTQNPDDDEFDYHVNRMCLICNKNLFNAAV 1085
Query: 1046 EQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG----RKIYVTGRKKVKSKTVAD 1101
++++ +IR+ F W G L G RK + + KT+AD
Sbjct: 1086 DKEIYKYIRSRGFSRHTWYPEGLK----------LLQGKDHSRKATTESKHALAEKTIAD 1135
Query: 1102 VVEALIGAFLSTGGENVGLIFL---------------DRIGIKVDFVNVP-YQRQFQVHA 1145
V EALIGA L +GG + +R + F +P YQR+ A
Sbjct: 1136 VCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQRRAADGA 1195
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITV 1203
E ++ R LE L+Y FR P+LL A TH SY ++P CYQRLEFLGD+++D +
Sbjct: 1196 ELYLS-RKLEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLEFLGDSLIDMVCVE 1253
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI---TVDS 1260
L+ ++P P +LT+ + A V+N +VK GLH H+ + S L +I + +
Sbjct: 1254 DLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQT 1313
Query: 1261 FEKLSLGSTFGWESVTSFPKA----------------LGDIIESLAGAIFVDSGCNREVV 1304
E S G+ W PK L D++E+ GA+FVDS N EV+
Sbjct: 1314 AEGESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQCLPDMVEAYVGAVFVDSDFNFEVI 1373
Query: 1305 FQSIRPLLEPMI 1316
+ R ++P
Sbjct: 1374 ERFFRDYIKPFF 1385
>gi|356555908|ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 285
Score = 259 bits (663), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 146/168 (86%), Gaps = 3/168 (1%)
Query: 2 EPVSMESDTT---EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS 58
E +S+E D+ ++++AD LPFA +YQLEAL+NA+++NTIV+LETGSGKTLIA+MLLRS
Sbjct: 3 EVLSLEVDSNTQQQKITADVLPFAGSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRS 62
Query: 59 YAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS 118
YA+ LRKPSP ++VFLVP+VVLV QQAEA+K HTDLKVG +WGDMGVDFWD TWK+E+
Sbjct: 63 YAHHLRKPSPQISVFLVPQVVLVSQQAEAVKKHTDLKVGMFWGDMGVDFWDATTWKQEVE 122
Query: 119 KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMT 166
KHEV VMTP ILL+ LR S+ KLN+IKVLI+DECHHARGKH YACIMT
Sbjct: 123 KHEVFVMTPAILLNCLRHSFLKLNLIKVLIMDECHHARGKHPYACIMT 170
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Query: 1281 ALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSM 1340
LGDIIESLAGAI VDS N+EVV+QSIRPLLEP++TPET++ HP+REL E CQK + +
Sbjct: 171 VLGDIIESLAGAILVDSRFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKI 230
Query: 1341 KKPVASRISGKAAVTVEVQANGRLFEHTFLD-ADKKTAKKVACKEVLKSLR 1390
SR G +E++A+G + E+ + A + TAKK+ACKE+L SL+
Sbjct: 231 VLEDVSRKDGVTNYRMELEADGVIHEYEYTGPALRDTAKKIACKEILNSLK 281
>gi|168039661|ref|XP_001772315.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162676302|gb|EDQ62786.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 566
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 251/479 (52%), Gaps = 46/479 (9%)
Query: 9 DTTEEVSADTLP---FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
D E D LP R YQ+EALE A K++ IV+LETG GKT +A+MLL+ A L+RK
Sbjct: 75 DQEGEDEFDALPNVLTPRGYQIEALERAKKEDIIVYLETGCGKTHVAVMLLQHIADLIRK 134
Query: 66 PSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM 125
PS +AVFL P V LV QQA +K +T+ KVG+Y+G++ + W+ W+ E+ E+ VM
Sbjct: 135 PSTRIAVFLCPSVPLVQQQARVVKRYTNFKVGEYYGEVNNNAWNSKAWEAELENTEIFVM 194
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN---LPR 182
TP ILL L + +++ I++LI DECHHA H YA IM EFYH G + LPR
Sbjct: 195 TPAILLHNLHHCFMRMDCIELLIFDECHHAHSHHPYANIMQEFYH-----GKEDLYRLPR 249
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
I GMTASPI KV+ KI +E ++++K++T S L +P K ++Y+
Sbjct: 250 ILGMTASPINGKVNCQGDSIRTKIDKIERMLHAKLHTVKESSELDLVVPRPHHKSEYYES 309
Query: 243 DEIPHALYTHLADELAMIE------LKHTRSLENLDLNEAQAELIRKK---VSKINSTLL 293
+ P+ + L ++ L T E L E + + +K+ V K+ ++L
Sbjct: 310 AQTPNPVTLKFCQLLFDLQKECIGTLLGTSGCEGELLGELCSGVEKKRVKNVKKLCNSLG 369
Query: 294 YCLSELGVWLALKAAET-ISCYESDFFAWEQLDGFGE----------TIIKKFGSDASQA 342
YC +ELG A +A + + Y+SD +LD E + F S +A
Sbjct: 370 YCATELGPRCAYEAVKILLHKYDSD--CDPELDSNSEGKKDMLRKILNALNSFLSKEVEA 427
Query: 343 LVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIV 402
VP GA N+ + L+ K+ LI L R ++RCIIFVER IT V
Sbjct: 428 TSCAVPDGAA---------NIQN--LSSKVQLLINVLERCRDTNEMRCIIFVERKITTRV 476
Query: 403 LQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVI--VATSILE 459
L SLLS + ++ + +AG NSG + K Q +VE FR G V +I VA + E
Sbjct: 477 LASLLSSIEVLSPAFRFQSLAGKNSGSNDMNHKHQQNVVESFRNGEVGIIGVVAAKLCE 535
>gi|392895692|ref|NP_498761.2| Protein DCR-1 [Caenorhabditis elegans]
gi|408360292|sp|P34529.3|DCR1_CAEEL RecName: Full=Endoribonuclease dcr-1
gi|379657006|emb|CCD71200.2| Protein DCR-1 [Caenorhabditis elegans]
Length = 1910
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 225/696 (32%), Positives = 338/696 (48%), Gaps = 111/696 (15%)
Query: 14 VSADTLPF-ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPF 69
V AD F R+YQ+E L+ A K+NTIV L TGSGKT IA++LL+ Y L P
Sbjct: 4 VRADLQCFNPRDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGK 63
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEE-MSKHEVLVMTPQ 128
A F+V KV LV QQA I++HT KVG+ G WD ++ M +H V+V+T Q
Sbjct: 64 RAFFVVEKVNLVEQQAIHIEVHTSFKVGQVHGQTSSGLWDSKEQCDQFMKRHHVVVITAQ 123
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
LLD +R +Y K+ + VLI DECHHA G +H Y IM ++ +LL+ D +PR+ G+T
Sbjct: 124 CLLDLIRHAYLKIEDMCVLIFDECHHALGSQHPYRSIMVDY--KLLKK-DKPVPRVLGLT 180
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF-----------IPFSTAK 236
AS IK+KV+ + +++ LE+ M+S + T + LS + F
Sbjct: 181 ASLIKAKVAP--EKLMEQLKKLESAMDSVIETASDLVSLSKYGAKPYEVVIICKDFEIGC 238
Query: 237 FKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL 296
+D + + DE T +LDL+ R+ + T
Sbjct: 239 LGIPNFDTV-----IEIFDETVAFVNTTTEFHPDLDLDP------RRPIKDSLKTTRAVF 287
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIK---------KFGSDASQALVTYV 347
+LG W A + A+ WE+ G IIK +F + A +++T +
Sbjct: 288 RQLGPWAAWRTAQ----------VWEKELG---KIIKSQVLPDKTLRFLNMAKTSMIT-I 333
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESL-----------LEYRGVEDIRCIIFVER 396
E + + ++++ L E L ++ E + IIFV++
Sbjct: 334 KRLLEPEMKKIKSIEALRPYVPQRVIRLFEILETFNPEFQKERMKLEKAEHLSAIIFVDQ 393
Query: 397 VITAIVLQSLLSELLPRHC-TWKTK-------YIAGNNSGIQCQS------RKKQNEIVE 442
A SLL L+ RH +W+ K Y+ G SG S K+Q E++
Sbjct: 394 RYIAY---SLL--LMMRHIKSWEPKFKFVNPDYVVG-ASGRNLASSDSQGLHKRQTEVLR 447
Query: 443 EFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS 502
F R +N ++ATS+LEEG+DV+ CNLVI FD + S++QS+GRAR S Y++ V+
Sbjct: 448 RFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGSRYVITVEE 507
Query: 503 GDSTT-QSRLENYLASGNKMRKEVLSHASLPCSPL-NNHMYGEDF--------YHVESTG 552
D+ S L+++ ++ K +LS +P+ ++ E+F Y VE TG
Sbjct: 508 KDTAACDSDLKDF----QQIEKILLSRHRTVNNPIEDDSDRFEEFDVDSQMEPYVVEKTG 563
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGI----CTLYLPNNCPIQTVI 606
+S++++LI YCS+LPSD + + P I +E G+ L LP N PI+ I
Sbjct: 564 ATLKMSTAIALINRYCSKLPSDIFTRLVPHNQIIPIEENGVTKYCAELLLPINSPIKHAI 623
Query: 607 A----QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
N KT + A LEAC++LH G L DNLLP
Sbjct: 624 VLKNPMPNKKTAQMAVALEACRQLHLEGELDDNLLP 659
Score = 192 bits (489), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 227/507 (44%), Gaps = 107/507 (21%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L A+TT + LE ET+GDSFLK+A + L+ T + HEG LS + + +SN L
Sbjct: 1397 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKEVSNCNL 1456
Query: 1041 CKLG----------------------------CEQKLPGFIRTESFDPKM---------- 1062
+LG C+ K P E D ++
Sbjct: 1457 YRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEIERILDGQVIE 1516
Query: 1063 --------WIIPGDNSGSYELNDDSLFNGRKIYVTG------------RKKVKSKTVADV 1102
W I GD S S +++ ++ V ++ + K++AD
Sbjct: 1517 EKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQHISDKSIADA 1576
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYQRQ----FQVH 1144
VEALIG L T G N L ++ +G+KV F++ P F +
Sbjct: 1577 VEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTNPNASLNFLNN 1636
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
+ LE + Y F++ + LV+A TH SY+ + CYQRLEFLGDAVLDY+IT Y
Sbjct: 1637 LWQQFQFTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRY 1696
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
L+ SPG LTD+RSA VNN +A +VK KH + LY I V +
Sbjct: 1697 LFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEKFVKLCSER 1756
Query: 1265 SLGSTFGWE--SVTS-------------FPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
+ + F E VT+ PKA+GDI ES+AGAI++DSG N + +Q I
Sbjct: 1757 NFDTNFNAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNLDTTWQVIF 1816
Query: 1310 PLLEPMIT------PETMRFHPVRELTEYCQ-KNHFSMKKPVASRISGKAAVTVEVQANG 1362
++ I P + P+REL E+ Q K FS + + SGK VTVEV N
Sbjct: 1817 HMMRGTIELCCANPPRS----PIRELMEFEQSKVRFSKMERILE--SGKVRVTVEVVNNM 1870
Query: 1363 RLFEHTFLDADKKTAKKVACKEVLKSL 1389
R T + + + AK A K LK L
Sbjct: 1871 RF---TGMGRNYRIAKATAAKRALKYL 1894
>gi|291000766|ref|XP_002682950.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
gi|284096578|gb|EFC50206.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
Length = 1386
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 340/1385 (24%), Positives = 590/1385 (42%), Gaps = 271/1385 (19%)
Query: 50 LIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIK-------------------- 89
++AIML+ Y + + VF+ +LV QQAE I+
Sbjct: 1 MVAIMLI-DYMLNETEQNDKKLVFIAENRILVNQQAEHIRSTLKYLETERLEQQDSKSID 59
Query: 90 ---MHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKV 146
+ D V Y GD G+ + +E+ K +V+V T L + L + ++ I +
Sbjct: 60 NISKNIDGMVACYVGDSGL--LNKLRSNKELKKKKVIVTTAAFLQNLLTHNIIEMESISL 117
Query: 147 LILDECHH-ARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQK 205
LI+DECHH G H Y IMT++YH + + P+IFGMTAS I+S + QK
Sbjct: 118 LIIDECHHCGDGDHPYKVIMTQYYHTIKQV--EKRPKIFGMTASAIRSLNETKANLQKQK 175
Query: 206 IHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI-ELKH 264
LE ++ K+ T +SE L Y E+ +T+L +E+ + E +
Sbjct: 176 ---LEAYLDCKLTTISSEDEL---------------YSELRE--HTNLPNEIILTYESTN 215
Query: 265 TRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQL 324
+ S + DL + LI + ++K ++ + E+ L +DF L
Sbjct: 216 SESTKIDDLKDF-CTLIVENLTKFSTIQTKDIIEISRILF-----------NDFNYI--L 261
Query: 325 DGFGETIIKKF---------------GSDASQALVTYVPSGAEWSIGDDSKFNL-----D 364
D G + +K + S ++ LV++ + + + +F +
Sbjct: 262 DNLGSSCLKDYLTIIFDHIEERKQENQSLSTSELVSFSSDSSYQQLKKNQEFEIIVSESV 321
Query: 365 SGLLTEKI------------VCLIESLL-----EYRGVEDIRCIIFVERVITAIVLQSLL 407
LT KI + L+E +L E +RCI+F ER TAI+L
Sbjct: 322 RNKLTNKIEKIFPKPSPSRKLKLLEEVLNEHFPENNTTNQMRCIVFCERRHTAILLSRYF 381
Query: 408 SEL-LPRHCTWKTKYIAGNNS-------GIQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
++ LP C +I G+N+ G + + +Q E FR G + + T+++E
Sbjct: 382 AKKGLP--C----DFIIGHNALSVRTKLGFKKNTGFEQKSKTERFRSGELKCLFCTNVVE 435
Query: 460 EGLDVQSCNLVIMFDP-SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
EG DV +CNLVI FD + + ++IQSRGRAR Q S +++MV S D T Q +N G
Sbjct: 436 EGFDVPACNLVIRFDKFTDFLRAYIQSRGRARKQESKFIMMVNSTDLTQQELCKN----G 491
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
++++++L+ S +P N+ + Y S + TL++S+ L YC+ P+ +
Sbjct: 492 KRLQEKMLTQIS-DDTPNNSEIEDILIYETPSKAKL-TLNNSIRLYNQYCAVFPNQSIDE 549
Query: 579 PTPKFHINKE--MGICTLYLPNNCPIQTVI---------AQGNIKTL--KQAACLEACKK 625
PKF I + + + P NCP+ AQ + L K+ +A +
Sbjct: 550 KKPKFSIYADGPFFVTEITFPTNCPVPVFSISNNHEDDPAQYRLNKLVSKRYCAFKAVQL 609
Query: 626 LHQIGALTDNLLP---DIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQ-----DTKI 677
LH+ L D+L P V +A+ P + + PE+ N + T
Sbjct: 610 LHKYKELDDSLFPRYSKYVFASTEAEFAS--PASMATLLPQMPEIFNWREKKLNSIQTDN 667
Query: 678 TYHCYLIELKQHFNYDI----SARNIVLAMRTELESEIKKVN-FDLEVERGRLTVNLKHL 732
HC I YDI +A + + E++S+++++ + + GR + +K +
Sbjct: 668 PSHCVYI-------YDIFLDNNATDFQFIIPNEIDSDLEELGLLNFRMNGGR-HITIKKM 719
Query: 733 GRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQ--L 790
+ + +L C + +F ++ + P Q L
Sbjct: 720 ESTTVDNDYILKCFEYHEFMFN-----------------------KVAKISFPDQKQRNL 756
Query: 791 IDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCI 850
DW T +H ++ + I H G + N ++ T +N ++Y +
Sbjct: 757 QDW----TFFIIPKQAQQHFIDVPVL--DIIQH--HGKEAENILKNMILETIYNHRVYLL 808
Query: 851 TGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNG--------------- 895
+ N S F + YK +Y+E++G+++ ++PLL
Sbjct: 809 QNIEFDKNPKSHF--DTEDFPDYKTYYKEKWGLEIERPQQPLLRAYQPRFSTLGSTQVEH 866
Query: 896 RRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRII-MAPISLSTFYSFTFVPSIMHRLQ 954
+ IF V +L+ C SF + E+ R + +AP L +Y+ + SI +
Sbjct: 867 QNIFLVPEFLTAC-----------SFTI--EMLRFLKLAPEFLYRYYN-RLITSIFSKQF 912
Query: 955 SLLLAVNLKNMLLDHCMQNVTIPTIKVL-EAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
L + +L D T+ ++L EA+T K+ Q + E LE GDS LKY S+
Sbjct: 913 ELFQPIVDATLLED----GKTLEAFELLEEALTAKRSQVGANYEKLEFFGDSILKYIVSK 968
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSY 1073
++ + G LS + + +SN L + +LP FI TE + + N G +
Sbjct: 969 HIYHEFPLYSSGSLSQLQHKFVSNYFLASVARNTRLPLFIITEPLNTSQLV---QNIGGF 1025
Query: 1074 ELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI--FLDRIGIKV- 1130
+ N K + + K +ADVVE++IG G ++ I FL +G+ +
Sbjct: 1026 KSN--------KFADETNIEAEYKVLADVVESIIGFCYHIFGGSLEQINRFLGLVGVSLP 1077
Query: 1131 -------DFVNVPYQRQFQVHAERL-VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 1182
+ + + + + H E+L +++ L LN+ F + LL+EA H SY
Sbjct: 1078 KGEISGSEDIFMNQKLLLRNHFEKLKIDLYKLTEKLNFQFENSGLLLEAFIHPSY---NG 1134
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKY---PGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
Y+RLEFLGD+VL ++T ++ K+ S G ++ +R V N +A +++ L
Sbjct: 1135 VFNYERLEFLGDSVLGLIVTSKIFEKFHKNSSFSLGMMSKLREKIVMNKNFANLCIENQL 1194
Query: 1240 HKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGC 1299
+I+ + + + +++ + D E + K L D+ ESLAGA+FVDS
Sbjct: 1195 QNYIIFSGNHIAQQVVHSKDDGE---------------YVKMLSDVFESLAGALFVDSHY 1239
Query: 1300 NREVV 1304
+ + V
Sbjct: 1240 DLDTV 1244
>gi|302819687|ref|XP_002991513.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
gi|300140715|gb|EFJ07435.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
Length = 850
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 317/635 (49%), Gaps = 51/635 (8%)
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQ-NS 494
+Q E+++ F G +N+++ATS+ EEGLDVQ+C VI FD +T+ S +QSRGRAR + +S
Sbjct: 25 QQQEVLDSFAGGKLNLLIATSVAEEGLDVQACCGVIRFDVCQTLQSHVQSRGRARNRLSS 84
Query: 495 DYLLMVKSGDSTTQSRLENYLASGNKM-RKEVLSHASLPCSPLNNHMYGEDFYHVESTGT 553
Y+ ++++G+ Q L N L + ++ +V+ + + +F+ VES G
Sbjct: 85 TYVWLLETGN-VEQLNLFNQLCTSERVVEDQVIFRNYMDITREAPPEGDLEFFRVES-GA 142
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKT 613
+ SVS I+ YC+RL D Y+ PKF K+ +CT+ P N P+++V +G ++
Sbjct: 143 CKSSQDSVSFIHEYCARL-GDRYYNAKPKFSF-KDSFVCTVEFPPNAPLRSV--EGPLRR 198
Query: 614 LKQ----AACLEACKKLHQIGAL-TDNLLPDIV-VEKHDAQKRGNEP------YNAEHPI 661
+Q AACL+AC+KL+ +G + D L PD+ ++ D R NE ++ P+
Sbjct: 199 TEQLAKKAACLQACRKLYDMGEVRPDTLCPDVDDFDEEDQSMRKNESGKRKEIFSTAKPL 258
Query: 662 YFPPELV-NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEV 720
F V N+S + C++IE + Y N + +++E+ L
Sbjct: 259 IFEGSWVFNESEVQLQFYKICFVIEPPESRTYS----NFGFLVNCVIDAEVTDSEVTLFS 314
Query: 721 ERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDG-FELRDNLEI 779
+ + +G IQL NQV + +Q ++++ ++L E+ N
Sbjct: 315 RNRVVNARVHRVGPIQLDANQVKAAKAYQ----ELLLNGAFNRLARCSGSPQEILWNKSQ 370
Query: 780 DYLLLP--STGQLIDWKTV-ATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK--I 834
+LLLP IDW +V AT R S + + + T + LCT +
Sbjct: 371 AFLLLPVHDDNDSIDWTSVHATAGVYRTLCSNFSPSSPIDGDGVGEKTHADMLCTANGYV 430
Query: 835 HNS-----LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDR 889
H+S +V T HNG+++C+TGVL + A SL + TY +Y+++Y L
Sbjct: 431 HSSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKRG---FTYIDYYKDKYQRTLRLPD 487
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
+PLL + N L + ++ + ELPPELC + I S FVPS
Sbjct: 488 QPLLKAKPTHAFHNLLIRPKEDHGSRQEESFVELPPELC--LCLEIKSGLIRSLYFVPSF 545
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKY 1009
+H+ S + A+ L++ L IP K+LEAIT+KKC E+F ESLE LGDSFLKY
Sbjct: 546 LHQFTSTVCAIQLRSPLWPW------IPAAKILEAITSKKCHEEFSYESLELLGDSFLKY 599
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
+Q+LF Y HEG LS ++ + ++ G
Sbjct: 600 VVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTG 634
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 109/245 (44%), Gaps = 48/245 (19%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY--------------- 1230
Y+ LE LGD+ L Y++T L+ Y G L+ R+ +
Sbjct: 586 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLPLIHQ 645
Query: 1231 --ALSSVKHGLH----------KHILHASH------------ELYKRINITVDSFEKLSL 1266
+L S++H L + I HAS EL I V + ++
Sbjct: 646 NASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVELDCEIRKFVQNVKEKPD 705
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
S F S PK LGD++ES+ GAIFVD+ + E +++ + PLL P++TP T+RFHPV
Sbjct: 706 ASCF---DDLSSPKVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPATLRFHPV 762
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKAAVT-VEVQANGRLFEHTFLDADKKTAKKVACKEV 1385
R L E C + MK S +A T V V T + +K+AK A ++
Sbjct: 763 RILMELCARK--GMK---VSFFRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKM 817
Query: 1386 LKSLR 1390
L SL+
Sbjct: 818 LASLQ 822
>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1520
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 198/676 (29%), Positives = 321/676 (47%), Gaps = 97/676 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL-----RKPSPFVAVFLVP 76
AR+YQLE L++A+++NTIV L TG+GKT IA++L++ +++ + P+ +FLV
Sbjct: 6 ARSYQLELLDSAIEKNTIVLLGTGAGKTFIAVLLIKQFSHEILDSFRDNPNSKRTIFLVT 65
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQA I+ H DL VG Y+G+MGVD W W E+ + +LVMT QI LD L
Sbjct: 66 TVALVTQQANYIRTHIDLNVGTYYGEMGVDAWRLTKWNSELECNHILVMTRQIFLDMLSH 125
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ ++ + ++I DECHHA Y IM + E N P I G+TAS I K
Sbjct: 126 GFISMSRVNLIIFDECHHAVKNDPYVQIMKHYND---ERYMCNKPHILGLTASIISGKCK 182
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
+ + ++I LE +N++V T + ++ + + + Y + ++ L
Sbjct: 183 PDKLE--ERIRKLEATLNARVETATDLAEVAKYA--TNPQESLVTYGATSNQHHSELTVR 238
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
L + + T ++A + ++ +Y + + + A++A I
Sbjct: 239 LKSV-ISETLKFMYQAPQSSRAGTVPSRLQCYLEECIYVMENISITSAVEAVRLIETEIK 297
Query: 317 DFFAWEQLDGFGETIIKK----------FGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
D ++ D GE I F S ++ L + D S
Sbjct: 298 DML--DEGDAVGEWDITLCHLLLLKLSIFSSQCNELLFD--------GVNDHSP------ 341
Query: 367 LLTEKIVCLIESLLEYRG--VEDIRCIIFVERVITAIVLQSLLSEL-LP--------RHC 415
K L+E LL R ED I+FVE+ +TA+ L +++E+ LP H
Sbjct: 342 ----KFSKLLEILLNLRSSQAEDFCGIVFVEQRMTAMCLSQIITEIKLPGIRCSFIVGHA 397
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ K + SG + KKQ E++++FR G +N+++ATS++EEGLDV+ CN+VI +D
Sbjct: 398 SSSGKIMEKKVSGSGGMNAKKQQEVLKKFRSGTLNLLIATSVVEEGLDVRKCNVVIRYDF 457
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVK-------SGDSTTQSRLENYLASGNKMRK----- 523
+T S +QS+GRAR ++S YL+++ + D ++LE LAS R+
Sbjct: 458 PKTFQSHVQSKGRARAKDSRYLVLIDQTQESKCTCDIKEYAKLEEMLASLCHNRESPDED 517
Query: 524 EV---LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
EV L H P P YG +G + SS+SL++ YC +LP D Y
Sbjct: 518 EVSRQLMHLMKPYQP-----YG-------PSGPSLPIDSSLSLLHRYCQKLPGDQYTVMA 565
Query: 581 PKFHIN--------------KEMGICTLYLPNNCPIQTV--IAQGNIKTLKQAACLEACK 624
P F + + + +CT+YLP P+++ IA + +Q+A A +
Sbjct: 566 PDFKLEPVDDAICQLDGRRYETLFMCTVYLPTCSPVRSAQGIAVPRVNLARQSAAFIAIQ 625
Query: 625 KLHQIGALTDNLLPDI 640
LH++ + P I
Sbjct: 626 DLHKVPSCLKESFPYI 641
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 142/272 (52%), Gaps = 47/272 (17%)
Query: 1158 LNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L++ F D +LL++ALTH SY + R YQRLEFLGDAVLDYLIT LY ++P +PG
Sbjct: 1245 LSWDFSDRALLLQALTHPSYSNKNRVTRSYQRLEFLGDAVLDYLITCCLYTEFPSYTPGQ 1304
Query: 1217 LTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSF---------EKLSL 1266
+T+ RSA VNN +A +VK LH ++L+ S L+++I V+ EK +
Sbjct: 1305 ITETRSALVNNVTFAEIAVKKLSLHTYLLYLSPSLFRKITEYVEFLQEDERESGSEKELI 1364
Query: 1267 GSTFGWES---------------------VTSF--PKALGDIIESLAGAIFVDSGCNREV 1303
FG +S +T PK LGD++ESLAGA+F+DSG + E
Sbjct: 1365 YCRFGDQSENVHEEMNGDIAMLEEEEEADITELEPPKVLGDVLESLAGALFLDSGMSLET 1424
Query: 1304 VFQSIRPLLEPMITPETMR-----FHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEV 1358
V+ P P+I E+ + HP++EL + S++ +S K T++V
Sbjct: 1425 VWSYFYPFFRPLI--ESFKEKGPPVHPIQEL----MRTEPSVEIMQSSTRRSKHRCTIKV 1478
Query: 1359 QANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ + + + KTAK A K V++ ++
Sbjct: 1479 I--DKDIQVSCIAESYKTAKNGAAKRVIRKIK 1508
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 124/274 (45%), Gaps = 31/274 (11%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+++T ++ F LE LETLGDSFLK A S LF +HEG L+ + ISN L
Sbjct: 1002 LLQSLTGTSAKDSFDLERLETLGDSFLKLAVSVSLFCGRGKDHEGKLTRSRINRISNFNL 1061
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIPGDNSGSYELNDDSLFNG-----------RKIYV 1088
L ++ LPG ++TE F+P WI PG + L+ DS +K Y
Sbjct: 1062 SFLAKKKGLPGLLQTEQFEPLSGWIPPG-----FSLSLDSALPDHVPPNTLPAVIQKYYY 1116
Query: 1089 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL 1148
KV K +AD EAL+GA+L GG G FLD +G++ + + + + + +
Sbjct: 1117 ---HKVTDKGIADSTEALLGAYLIAGGLGAGFSFLDWLGLQKPTESSSFSQDVTMSSCNV 1173
Query: 1149 VNVRHLESLLNYSFRDP---SLLVEALTH--GSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
+ SL++ P +L++ TH S LP P L + D I
Sbjct: 1174 SRKQSQSSLMSIEEASPCINPILLQNSTHVFSSCCLPPPP------SLLDSSAPDTTIDK 1227
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
L + PG L D S ++ L ++ H
Sbjct: 1228 LLSSAVPGGGRSSLYDKLSWDFSDRALLLQALTH 1261
>gi|414879098|tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 595
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 211/377 (55%), Gaps = 24/377 (6%)
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
+TT +C EDF +E LE LGDS LKYA S LF T+ N HEG LS +++ I NA L +LG
Sbjct: 1 MTTLRCCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLG 60
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGS-----------------YELNDDSLFNGRKIY 1087
E+++ G+IR +FDP+ W+ PG S + ++D S+ G K
Sbjct: 61 IERRIQGYIRDAAFDPRRWLAPGQLSRRPCPCECPVNSEVVTEDIHRIDDKSIIIG-KAC 119
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER 1147
G + + SKT++D VEALIGA+ GG L I+ + + R
Sbjct: 120 DKGHRWICSKTISDCVEALIGAYYVEGGLKAAFAVLKWFQIETEIEEELIMEALSSASVR 179
Query: 1148 -----LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
+ V LE+ L Y+F+ LL+EALTH S CYQRLEFLGDAVLD LIT
Sbjct: 180 NYLPKVDVVELLEAKLGYTFQMKGLLIEALTHSSQQESGATYCYQRLEFLGDAVLDILIT 239
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE 1262
+L+ + G LTD+RSASVNN+ +A +VKH LH+ + H+S L +I V+S E
Sbjct: 240 RHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYVNSLE 299
Query: 1263 KLSLG-STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
S+ ++ PK LGDI+ES+AGAI +DS + ++V++ +PLL P++TPE +
Sbjct: 300 SSSMDRASLLSSGPCRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFKPLLSPIVTPENL 359
Query: 1322 RFHPVRELTEYCQKNHF 1338
REL E+ KN +
Sbjct: 360 ELPRFRELNEWSDKNGY 376
>gi|241896736|emb|CAZ65730.1| dicer-2 protein [Mucor circinelloides f. lusitanicus]
Length = 1608
Score = 250 bits (638), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 206/653 (31%), Positives = 320/653 (49%), Gaps = 77/653 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY------LLRKPSPFVAVFLVP 76
R YQ E AL++N I L+TGSGKTLI+IML++ L R+ + +A FLV
Sbjct: 97 REYQYELFTKALEENIIAVLDTGSGKTLISIMLIKQMVLQERQERLTRRETK-LAFFLVD 155
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+V LV QQA I+ + D+ + + G+M VD W WK +++V VMT QI LD L
Sbjct: 156 RVPLVFQQASVIRANCDVNLEEICGEMEVDAWSEKRWKLIFEENDVCVMTAQIFLDTLHH 215
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL-LETGDSNLPRIFGMTASPIKSKV 195
+ L +LI DECHHA KH + IM EFY R LE + P+IFGMTASP+ ++
Sbjct: 216 GFISLEKAHLLIFDECHHATKKHPFNLIMREFYDRCPLE----HRPKIFGMTASPMHART 271
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLAD 255
+ + + LE ++++VYT + L+ IP + YD P T ++
Sbjct: 272 TVE-----RSVAQLEKNLHARVYTATNMESLNISIP--KPREISIHYDPTPRYEETEMSK 324
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET-ISCY 314
+ + E + R K I + + L+ LG W + + ++ +S
Sbjct: 325 K----------------IREKLGSIGRYKRCFIITQDI--LTSLGPWCSDRMWKSMLSEL 366
Query: 315 ESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVC 374
E Q I + + V + I D S L + K+
Sbjct: 367 ERKMTNMTQDLERDALIDEDLALKETHEYVDPIEFPRNPDIFDQS-------LFSPKVAE 419
Query: 375 LIESLLEYRG--VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS---GI 429
LI LL++ + D CIIFVER TA LQ+L++ L R + + + G+ S G
Sbjct: 420 LIR-LLQFTSERIPDFCCIIFVERRHTAKALQTLIAS-LDRLKDIRCESLTGHGSTEEGD 477
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ QN+I+++FR G +N+++AT++ EEGLD+Q CN+V FD T+ S+IQSRGRA
Sbjct: 478 VQMTFGDQNKIIQKFRSGELNLLIATNVAEEGLDIQPCNVVFRFDFFHTLISYIQSRGRA 537
Query: 490 RMQNSDYLLMVKSGDSTTQ------SRLENYLAS--------GNKMRKEVLSHASLPCSP 535
R + S ++++ ++ ++ + SRLE + + N RK +S +
Sbjct: 538 RKEGSKFIILTEANNAGQEDTLAEFSRLEADMKAFCQTMPEERNVARKYAIS-MDVDYDS 596
Query: 536 LNNHMYGE------DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY--FKPTPKFHINK 587
+++ E D + V TG T ++V LI+ YCS LPSD + KP + +
Sbjct: 597 DEDYISDEEENFLADAFIVPETGATITKQNAVPLIHKYCSSLPSDSFCVLKPIFENIVTG 656
Query: 588 EMGICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
E IC L LP+N P Q + + G+ + + L AC +L ++ AL +LLP
Sbjct: 657 EGYICKLILPSNAPFQEMESHVCGSKDLARASVALNACIRLRELDALDKHLLP 709
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 269/550 (48%), Gaps = 59/550 (10%)
Query: 820 RIVHTKSGPLCTCKIHNS---LVCTPHNGQIYCITGVLGHLNA-----NSLFTRNNGSVT 871
RI+ + S P + +V N + Y +T V ++ + + R G
Sbjct: 990 RIIESTSRPFTLDDYDPTDSIVVDQSDNMRRYFVTNVRTDMSPLSPVPDGVKIRETG-YA 1048
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRII 931
++ +Y E+ ++ +P+L +R+ V N+L + + + +S P C+
Sbjct: 1049 SFADYYNEKKFVEELDTSQPMLEVKRLKKVMNFLYPGKPSQAQMKGPMSTWTVPSFCQRF 1108
Query: 932 MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-----NVTIPTIKVLEAIT 986
+S S + + +PSIM R+ S+LL C Q ++ I +LEA T
Sbjct: 1109 F--MSASVYQATMMIPSIMTRIDSILL-----------CRQSAERYDLPIDDANMLEAYT 1155
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
T + + E LETLGDS LK+ A+ +L+ + ++EG L + R+I N AL +
Sbjct: 1156 TPSANMEMNYERLETLGDSLLKFIATIRLYINFPFSNEGELHHLRIRVICNRALYRSAKR 1215
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEAL 1106
K ++ +++F+ + W PG S + ++ +G K + K+ KT+AD+VEA
Sbjct: 1216 LKFYRYVTSQAFNRRYWRPPGFTSPA---DNQETIDGLKYH-----KLSDKTLADIVEAS 1267
Query: 1107 IGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESL-- 1157
+GA + G GL I D I DF + + QV A VR L SL
Sbjct: 1268 LGAAYLSNGLEGGLHAAIQLQIPFDEIKTWDDFKPTFEESRKQVPAR--AEVRALRSLDL 1325
Query: 1158 ------LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
+ F+ P L+VEALTH S P CYQRLEFLGDA+LD+++ YL+ +YP
Sbjct: 1326 PKVTEIVGREFKTPLLIVEALTHASLPNSTSP-CYQRLEFLGDAILDFMVIRYLFARYPD 1384
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL-SLGSTF 1270
PG +TD++ + VNN + ++ GL++HI+H S +L + I V E+ + G
Sbjct: 1385 ADPGIITDLKDSCVNNHILGIVCIETGLYRHIIHYSGKLIRAIEFFVSEVEETKARGEAV 1444
Query: 1271 GWESVT-SFPKALGDIIESLAGAIFVDSGCNREVVFQSIR----PLLEPMITPETMRFHP 1325
G V + PK L D++ES+ GA FVD+G E V + P+L +TPE ++FHP
Sbjct: 1445 GEYWVDFNIPKVLSDVVESMLGATFVDAGFRLEAVEELFAKWFLPILNNHVTPELIKFHP 1504
Query: 1326 VRELTEYCQK 1335
+R+L Q+
Sbjct: 1505 LRKLITDLQR 1514
>gi|341893002|gb|EGT48937.1| CBN-DCR-1 protein [Caenorhabditis brenneri]
Length = 1927
Score = 249 bits (636), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 211/673 (31%), Positives = 329/673 (48%), Gaps = 84/673 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A K+NTIV L TGSGKT IA++LL+ Y + P A F+V KV
Sbjct: 14 RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPLDQGGKRAFFIVEKVN 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEE-MSKHEVLVMTPQILLDGLRLSY 138
LV QQA+ I++HT KVG+ G + W E+ M ++ V+V+T Q LLD + ++
Sbjct: 74 LVEQQAKHIEVHTSFKVGQVHGQTSSELWKSPVACEKFMKENHVVVITAQCLLDFINHAF 133
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
K+ VLI DECHHA G KH Y IMT+ Y L + G+ +PR+ G+TAS IK KV+
Sbjct: 134 IKIQDTCVLIFDECHHALGSKHPYRLIMTK-YKELKKAGEP-VPRVLGLTASLIKEKVAP 191
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNF-----------IPFSTAKFKFYKYDEIP 246
+ +++ LE++++S + T + L+ + F T K YD+I
Sbjct: 192 --EKLSEQLVKLESVLDSVIETASDLVSLTKYGAKPYEAIVLCRDFETDKLGVPNYDKIM 249
Query: 247 HALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
+ LY D+ ++ T +L + DL+ R+ + S +LG W A K
Sbjct: 250 NLLYE--TDKF----IRET-TLFHPDLDMDPRSYAREALKATKS----VFQQLGPWAAWK 298
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
++ +E D L E F + A ++T V E + N
Sbjct: 299 ISQ---MFEKDLMKHINLQQLPEKAT-LFLNLAKTTIIT-VKRLLEPEMRQIKSLNELER 353
Query: 367 LLTEKIVCLIESL-----------LEYRGVEDIRCIIFVERVITAIVLQSLLSELL---P 412
+ +I+ L + + E + IIFV + A L ++ + P
Sbjct: 354 YVPHRIIRLFQVFEMFNPDFQKQRMALEKTEHLSAIIFVNQRYIAYSLHIMMRAIRQWEP 413
Query: 413 RHCTWKTKYIAG---------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLD 463
+ T ++ G NN G+Q K+Q + + +F RG +NV++ATS+LEEG+D
Sbjct: 414 KFKFLNTDFVVGASGPNMANSNNQGLQ----KRQTDALRKFHRGDLNVLIATSVLEEGVD 469
Query: 464 VQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK 523
V+ CN+VI FD + S++QS+GRAR S Y+++V D+ S ++ L ++ K
Sbjct: 470 VKQCNVVIKFDRPTDMRSYVQSKGRARKAGSRYVVLVDQKDT---SACDSDLKDFQQIEK 526
Query: 524 EVLSHASLPCSPLNNHMYG-----EDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+LS +P + +D Y VE TG +S++++L+ YC++LPSD
Sbjct: 527 ILLSRHRTVNNPTEDDSLTDLGDVDDLMAPYVVEKTGATIKMSNAIALVNRYCAKLPSDI 586
Query: 576 YFKPTPKFHI--NKEMGI----CTLYLPNNCPIQTVI----AQGNIKTLKQAACLEACKK 625
+ + P I ++ G+ L LP N PI+ I N K + A LEAC++
Sbjct: 587 FTRLVPNSTIIPVEDHGVTKYCAELLLPINSPIKHAIILKDPMPNKKAAQMAVALEACRQ 646
Query: 626 LHQIGALTDNLLP 638
LH G L DNLLP
Sbjct: 647 LHLKGELDDNLLP 659
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 224/516 (43%), Gaps = 124/516 (24%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L A+TT + LE ET+GDSFLK+A + L+ T Q+ HEG LS + + +SN L
Sbjct: 1412 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARSKEVSNCNL 1471
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP------------GDNSGSYELNDDSLFNGRKIY 1087
+LG + +P I FD W+ P D++ ++ + L NG I
Sbjct: 1472 YRLGKKLGIPQLIIANKFDAHDSWLPPCYIPTCNFKAPNTDDAEEKDIEMERLLNGETIE 1531
Query: 1088 VTGRKK----------------------------------------------VKSKTVAD 1101
+ K + K++AD
Sbjct: 1532 EKPQNKTGWDMELKDEAKTTTEKIETITFPKRTALVNEDISPLPYNLLTQQNISDKSIAD 1591
Query: 1102 VVEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYQ--------- 1138
+EALIG L T G N L + +G+KV F++ P
Sbjct: 1592 AMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAVTDVAAPLLRFIDTPTNPNASTIQLD 1651
Query: 1139 ---RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
+QFQ LE + Y F++ + LV+A TH SY + CYQRLEFLGDA
Sbjct: 1652 NLWQQFQFA--------KLEEKIGYRFKERAYLVQAFTHASYSNNRVTGCYQRLEFLGDA 1703
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
VLDY+IT +L+ SPG LTD+RSA VNN +A +VK+ KH + L+ I
Sbjct: 1704 VLDYMITRFLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKYEFQKHFIAMCPGLHHMIE 1763
Query: 1256 ITVDSFEKLSLGSTFGWE--SVTS-------------FPKALGDIIESLAGAIFVDSGCN 1300
V + + F E VT+ PKALGD+ ES+AGAI++DSG N
Sbjct: 1764 KFVQLCADRNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRN 1823
Query: 1301 REVVFQSIRPLLEPMI------TPETMRFHPVRELTEY-CQKNHFSMKKPVASRISGKAA 1353
+ +Q + ++ I P + P+REL E K FS + + +GK
Sbjct: 1824 LDTTWQVLFHMMRSTIESCCANPPRS----PIRELMELESSKARFSKMERILE--TGKVR 1877
Query: 1354 VTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
VTV+V N R T + + + AK A K L+ L
Sbjct: 1878 VTVDVGNNMRF---TGMGRNYRIAKATAAKRALRYL 1910
>gi|302764440|ref|XP_002965641.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
gi|300166455|gb|EFJ33061.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
Length = 524
Score = 249 bits (636), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 251/454 (55%), Gaps = 42/454 (9%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+P + +R++ ++ A+ L+ + N IP K+LEA+T C E + E +E LGD+
Sbjct: 15 LPHLRNRVERMMQAIQLRKAI------NYNIPASKILEALTAANCHEPYCYERIELLGDA 68
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII 1065
+LK+A S +L+ + + EG L++ + +IISN+AL L E+ L ++R F P
Sbjct: 69 YLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLETYVRINPFVP----- 123
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
GR+ T +++ SK +A+VVEALIGA+ G+ ++
Sbjct: 124 -----------------GRE--PTDLQELSSKVLANVVEALIGAYYVHHGDKGARHVVEW 164
Query: 1126 IGIKVDFVNVPYQ--RQFQVHAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLP 1180
+GI+ F + Q R V + ++N LE+ L YSFR +LL +ALTH S
Sbjct: 165 LGIETGFSDAELQIARAGSVVSPEVLNSIDFEGLENTLGYSFRSRNLLAQALTHSSSRQA 224
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH 1240
+ Y+RLEF+GDAVLD+L+T ++Y Y L PG LTD+R A++N++ +A + VKH LH
Sbjct: 225 SMVPIYERLEFIGDAVLDHLLTRHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLH 284
Query: 1241 KHILHASHELYKRINITVDSFEKLSLGS--TFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
HILH S++ + +I + + ++G+ +V + PK LGD+ +SL GA+++DSG
Sbjct: 285 AHILHESNDFHSQIKTYAKHALNMEENAIYSYGFGAVKA-PKVLGDVFQSLVGAVYIDSG 343
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEV 1358
N + V++ PLL+P++TPE + HPVREL E C K+ ++ + +SG + +
Sbjct: 344 LNLDQVWKVFEPLLQPLVTPEAVPIHPVRELYELCDKHLKKLEWDYS--LSGDLFLARAL 401
Query: 1359 QANGRLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
N L T + KK AKK+A + L S
Sbjct: 402 VGNKVLGRGT--NVQKKMAKKLAAINAIAKLDKS 433
>gi|308485595|ref|XP_003104996.1| CRE-DCR-1 protein [Caenorhabditis remanei]
gi|308257317|gb|EFP01270.1| CRE-DCR-1 protein [Caenorhabditis remanei]
Length = 1941
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 217/677 (32%), Positives = 330/677 (48%), Gaps = 91/677 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A K+NTIV L TGSGKT IA++LL+ Y + P A F+V KV
Sbjct: 14 RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPYGQGGKRAFFIVEKVN 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQA+ I++HT KVG+ G + W + E M ++ V+V+T Q LLD + +Y
Sbjct: 74 LVEQQAKHIEVHTSFKVGQIHGMTSTELWKSPESCDEFMRQNHVVVITAQCLLDLINHAY 133
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
KL VLI DECHHA G KH Y IM ++ + L+ +PR+ G+TAS IK KV+
Sbjct: 134 VKLQDTCVLIFDECHHALGSKHPYRLIMIKY--KELKKAGHPVPRVLGLTASLIKEKVAP 191
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNF--IPFSTAKF-KFYKYDEIPHALYTHLA 254
+ ++++ LE++++S + T + LS + PF + ++ + +P Y +
Sbjct: 192 --EKLTEQLNKLESVLDSVIETASDLVTLSKYGAKPFEALVLCRDFETENLPLPHYETIM 249
Query: 255 DELAMIE--LKHTRSLE-NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
L E + HT +LDL+ R+ + T L +LG W A K A
Sbjct: 250 ALLLDTEKFVNHTTVFHPDLDLDP------RRSIRDSLKTTKAVLRQLGPWAAWKIAAMW 303
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW-SIGDDSKFNLDSGLLTE 370
S + L + + + P + S+ D KF + +
Sbjct: 304 EKELSKLTKSQILPDKALLFLNLAKTSMTTVKRLLEPEMRKVKSLADLEKF------VPQ 357
Query: 371 KIVCLIESLLEY----------RGV-EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
+ V L ESL + R V E + I+FV++ A L ++ + W+T
Sbjct: 358 RFVRLFESLEMFEPEFQMKRMNREVPEKLSAIVFVDQRYIAYALYVMIRNVR----QWET 413
Query: 420 K-------YIAG---------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLD 463
K Y+ G +N G+ K+Q E + F + +NV++ATS+LEEG+D
Sbjct: 414 KFKFVQSDYVVGASGQNLANSDNQGLH----KRQTEALRRFHKNEINVLIATSVLEEGVD 469
Query: 464 VQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMR 522
V+ CNLVI FD + S++QS+GRAR S Y++MV D + S L+++ ++
Sbjct: 470 VKQCNLVIKFDRPLDMRSYVQSKGRARKMGSRYVVMVDHKDVPSCDSDLKDF----QQIE 525
Query: 523 KEVLSHASLPCSPLNNHMYGEDF-----------YHVESTGTIATLSSSVSLIYFYCSRL 571
K +LS +P + DF Y VESTG LS++++L+ YCS+L
Sbjct: 526 KILLSRHRTVNNPTEDDSI--DFNLDDVDHLMPPYVVESTGAELKLSNAIALVNRYCSKL 583
Query: 572 PSDGYFKPTPKFHI--NKEMGI----CTLYLPNNCPIQTVI----AQGNIKTLKQAACLE 621
PSD + + P I ++ G+ L LP N PI+ I N K + A LE
Sbjct: 584 PSDIFTRLVPHSRIIPVEDRGVTKYCAELLLPINSPIKHAIILKDPMPNKKAAQMAVALE 643
Query: 622 ACKKLHQIGALTDNLLP 638
AC++LH G L DNLLP
Sbjct: 644 ACRQLHLKGELDDNLLP 660
Score = 193 bits (491), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 226/507 (44%), Gaps = 107/507 (21%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L A+TT + LE ET+GDSFLK+A + L+ T Q+ HEG LS + + +SN L
Sbjct: 1428 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARSKEVSNCNL 1487
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP---------GDNSGSYELND---DSLFNGRKIY 1087
+LG + +P I FD W+ P N+ E D + + NG+ I
Sbjct: 1488 YRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNNSDAEEKDKEIERILNGQTIE 1547
Query: 1088 -----VTG----------------------------------------RKKVKSKTVADV 1102
TG ++ + K++AD
Sbjct: 1548 EKPEDKTGWDIGGDTAKSTADGIETINFPKQSRLLNEDISPLPYNLLTQQNISDKSIADA 1607
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYQRQFQVHA--- 1145
+EALIG L T G N L + +G+KV F++ P + A
Sbjct: 1608 MEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAKTEVAHPLLRFIDTPANPDASLKALNN 1667
Query: 1146 -ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
+ +LE + Y F++ + LV+A TH SY+ + CYQRLEFLGDAVLDY+IT Y
Sbjct: 1668 LWQQYQFANLEERIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRY 1727
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
L+ SPG LTD+RSA VNN +A +VK KH + L+ I V
Sbjct: 1728 LFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIEKFVKLCADR 1787
Query: 1265 SLGSTFGWE--SVTS-------------FPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
+ + F E VT+ PKALGD+ ES+AGAI++DSG N + +Q +
Sbjct: 1788 NFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTWQVLF 1847
Query: 1310 PLLEPMIT------PETMRFHPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
++ I P + P+REL E K FS + + SGK VTV+V N
Sbjct: 1848 HMMRSTIDSCCANPPRS----PIRELMELEASKARFSKMERILE--SGKVRVTVDVGNNM 1901
Query: 1363 RLFEHTFLDADKKTAKKVACKEVLKSL 1389
R T + + + AK A K LK L
Sbjct: 1902 RF---TGMGRNYRIAKATAAKRALKYL 1925
>gi|302815180|ref|XP_002989272.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
gi|300143015|gb|EFJ09710.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
Length = 524
Score = 247 bits (630), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 250/455 (54%), Gaps = 44/455 (9%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+P + +R++ ++ A+ L+ + N IP K+LEA+T C E + E +E LGD+
Sbjct: 15 LPHLRNRVERMMQAIQLRKAI------NYNIPASKILEALTAANCHEPYCYERIELLGDA 68
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII 1065
+LK+A S +L+ + + EG L++ + +IISN+AL L E+ L ++R F P
Sbjct: 69 YLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLETYVRINPFVP----- 123
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
GR+ T +++ SK +A+VVEALIGA+ G+ ++
Sbjct: 124 -----------------GRE--PTDLQELSSKVLANVVEALIGAYYVHHGDKGARHVVEW 164
Query: 1126 IGIKVDFVNVPYQ--RQFQVHAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLP 1180
+GI+ F + Q R V + ++N LE+ L YSF +LL +ALTH S
Sbjct: 165 LGIETGFSDAELQIARAGSVVSPEVLNSIDFEGLENTLGYSFGSRNLLAQALTHSSSRQA 224
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH 1240
+ Y+RLEF+GDAVLD+L+T ++Y Y L PG LTD+R A++N++ +A + VKH LH
Sbjct: 225 SMVPIYERLEFIGDAVLDHLLTRHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLH 284
Query: 1241 KHILHASHELYKRINITVDSFEKLSLGS--TFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
HILH S++ + +I + + ++G+ +V + PK LGD+ +SL GA+++DSG
Sbjct: 285 AHILHESNDFHSQIKTYAKHALNMEENAIYSYGFGAVKA-PKVLGDVFQSLVGALYIDSG 343
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKK-PVASRISGKAAVTVE 1357
N + V++ PLL+P++TPE + HPVREL E C K+ MKK +SG +
Sbjct: 344 LNLDQVWKVFEPLLQPLVTPEAVPIHPVRELYELCDKH---MKKLEWDYSLSGDLFLARA 400
Query: 1358 VQANGRLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
+ N L T + KK AKK+A + L S
Sbjct: 401 LVGNKVLGRGT--NVQKKMAKKLAAINAIAKLDKS 433
>gi|442570277|sp|Q1DKI1.3|DCL1_COCIM RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|392869759|gb|EJB11896.1| dicer-like protein 1 [Coccidioides immitis RS]
Length = 1500
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 313/645 (48%), Gaps = 70/645 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA------YLLRKPSPFVAVFLVP 76
R YQ+E E A K N I L+TGSGKTLIA++LL+ KP V+ FLV
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEKPHR-VSFFLVD 158
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQA ++ + + +V K+ G M D W+G TW+ ++K+ V+V T ++L L
Sbjct: 159 SVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLH 218
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
++ K+ I +LI DE H+A+ H YA I+ +FY L+ G++ P+IFGMTASP+ +K+
Sbjct: 219 AFVKMENINLLIFDEAHNAKKDHPYARIVKDFY---LKDGNAKRPKIFGMTASPVDAKM- 274
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
D + +LETL+NS++ T ++ S+L +P + + YD + T L E
Sbjct: 275 ----DVVKAARNLETLLNSQIATASNLSLLRQSVPRPNE--EVWSYDRLDQPFETRLYKE 328
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
L R+LE K+ + L S LG W A+ + Y
Sbjct: 329 LRS-RFGDLRALE-----------------KLFTFSLKASSNLGAW----CADWVWSYAL 366
Query: 317 DFFAWEQLDG------FGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN---LDSGL 367
+ +L+G G I K +A + + +E I KF + L
Sbjct: 367 TEESLPKLEGRAARTAMGNLPIAKIVR--PEAEIQRIREASE--IIRSHKFGDPAVRPEL 422
Query: 368 LTEKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY-IAGN 425
L+ K+ L LL+Y D +CI+F E+ TA +L L S + +H + +
Sbjct: 423 LSPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSRIGTKHLRPGVLIGVRSD 482
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
SG S ++Q V FR+G VN + ATS+ EEGLD+ CNL++ FD + T+ +IQS
Sbjct: 483 ASGGMNISFRQQVLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQS 542
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNH-----M 540
RGRAR NS + +V+ D+ N+L S ++ K SLP + N +
Sbjct: 543 RGRARHMNSTFAHLVER-DNFVHRESVNHLQSSEEIMKRFC--ISLPKDRILNSDDVDAL 599
Query: 541 YGED----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH--INKEMGICTL 594
Y D Y V++TG T SSS+ ++ + + L + ++ K +C +
Sbjct: 600 YESDRNRKSYTVQTTGAKLTYSSSLVVLAHFANSLQYEKETSTVVSYYHRFTKNAFVCEV 659
Query: 595 YLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLL 637
LP PI+ ++ + K L KQ+A E C L + G L D+ +
Sbjct: 660 VLPEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 704
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 183/403 (45%), Gaps = 56/403 (13%)
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------------ 995
I+ R++S L+A L+ C + ++ I LEA+T D H
Sbjct: 1005 IISRIESYLIA-------LEACQELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMG 1057
Query: 996 --LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFI 1053
E LE LGD FLK A S LF +N E VK+ ++ N L K KL FI
Sbjct: 1058 KNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYAFI 1117
Query: 1054 RTESFDPKMWIIPGDNSGSYELNDDSLFNGR---KIYVTGRKKVKSKTVADVVEALIGAF 1110
R++SF + W PG + L G+ K + + KT+ADV EALIGA
Sbjct: 1118 RSQSFSRRGWY-PGGLT---------LLQGKGQSKGATENKHALADKTIADVCEALIGAC 1167
Query: 1111 LSTGGEN----------VGLIFLDRIGI-----KVDFVNVPYQRQFQVHAERLVNVRHLE 1155
+N L+ D + ++P + V A L ++
Sbjct: 1168 CLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVDAAELDLAAQVK 1227
Query: 1156 SLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+K+P
Sbjct: 1228 KKLGYDFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYHKHPDKD 1286
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS---TF 1270
P +LT+ + A V+N +V+ GLH H+ H S L +I V+ E L S
Sbjct: 1287 PQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGDPPD 1346
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
W + PK L D++E+ GAIF+DSG + EVV + + L+
Sbjct: 1347 AWTLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLK 1389
>gi|218184775|gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indica Group]
Length = 1093
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 217/408 (53%), Gaps = 27/408 (6%)
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+ +LEAITT +C E F LE LE LGDS LKY LF Y HEG LS + + + NA
Sbjct: 533 LDILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNA 592
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGD--------NSG---------SYELNDDSLF 1081
L K G + L G++R +FDP+ W+ PG N G + DD F
Sbjct: 593 TLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSF 652
Query: 1082 NGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-----FVNVP 1136
K G + + SKT++D VEAL+GA+ GG L + GI + V
Sbjct: 653 VVGKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVK 712
Query: 1137 YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAV 1196
+ ++ ++ LE+ L Y+F LL+EA+TH S + CYQRLEFLGD+V
Sbjct: 713 FNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSV 772
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LD L+T +LY + + PG LTD+RSA V+N+ +A + V++ +H H+ H S L ++I
Sbjct: 773 LDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITE 832
Query: 1257 TVDS-FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
V S E S F + PK LGDI+ES+AGA+F+D+ N ++V++ PLL P+
Sbjct: 833 YVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFLDTDFNVDMVWEIFEPLLSPL 892
Query: 1316 ITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGR 1363
ITP+ + P REL E C +H + S+ + K V +E+ R
Sbjct: 893 ITPDKLALPPYRELLELC--SHIGCF--LNSKCTSKGEVIIEMSLQLR 936
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR--KPSPFVAVFLVPKVVL 80
R YQ+E E AL+ NTI L+TGSGKT++A+ML R +A +R + + VFL P V L
Sbjct: 28 RGYQVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHL 87
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ E I+ +TDL V G V W WKEE+ ++E++VMTPQILLD LR ++
Sbjct: 88 VHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLT 147
Query: 141 LNMIKVLILDECHHARGKHQYACIM 165
++ + +LI DECH A G H YA IM
Sbjct: 148 MSAVSLLIFDECHRACGSHPYARIM 172
>gi|260831340|ref|XP_002610617.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
gi|229295984|gb|EEN66627.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
Length = 1760
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 214/699 (30%), Positives = 321/699 (45%), Gaps = 118/699 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQ+E L+ AL++NTIV L TGSGKT +A+ML++ + R FLV V
Sbjct: 13 RLYQMELLDAALEKNTIVCLGTGSGKTFVAVMLIKELSSQTRAALSDGGKRTFFLVNNVP 72
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA I HT+L +G+Y G MGVD W W++E H VLVMT QI LD L+ +
Sbjct: 73 LVSQQAAVITTHTNLSIGEYVGAMGVDLWTRDRWQQEFDTHHVLVMTAQIFLDILQHGFL 132
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + +LI+DECHHA G H Y IM F ++ + PR+ G+TAS ++ K +
Sbjct: 133 PLSKVNLLIIDECHHAVGHHPYREIMKTFDTCQVQ----DYPRVLGLTASILQGKCAPDS 188
Query: 200 QDYWQKIHDLETLMNSKV-----------YTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
+Q++ +LE + S YT V+ P + A
Sbjct: 189 --LFQRVRNLEVTLRSSAETATDLVGVDRYTTQPNEVVIESGPAQNEP-------GLSQA 239
Query: 249 LYTHLADELAMIELKHTR-SLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
L T + D LA I R S+E + + Q ++ + + + L LG W +A
Sbjct: 240 LQTLVDDALAFISSCKVRVSVEEGERDPCQVP--KQAIQECRA----ILEVLGTWATRRA 293
Query: 308 AETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW-SIGDDSKF----N 362
A I+ +L E +IK S+ Q + +V + + D F +
Sbjct: 294 AILIN---------REL----EKLIKHEWSEQHQLFLRWVHTVMHHVHLLCDEAFKDVED 340
Query: 363 LDSGLLTEKIVCLIESLLEYRGVE------------------------------------ 386
+D +T K+ L+E L E + E
Sbjct: 341 VDVQFVTPKVRRLLEVLRECKPNEVQSDNSKSVSNMNSKNHYHSSRRRDNLDNQDPNTSF 400
Query: 387 DIRCIIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNN-SGIQCQSR------KK 436
+ I+FVER TA+VL LL E P + I G+ S +SR ++
Sbjct: 401 QLCGIVFVERRYTAVVLNKLLQEFAKSDPDLAYISSSCITGHGLSSRGMRSRETEMAFRR 460
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q EI+ FR N+++ TS++EEG+DV CNLV+ FD + S++QS+GRAR Q S Y
Sbjct: 461 QEEILRRFRMHENNLLIGTSVVEEGVDVPKCNLVVRFDLPKDYRSYVQSKGRARAQGSHY 520
Query: 497 LLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNH----MYGEDFYHVEST 551
+++V+ + + + L + +R++ H + H M
Sbjct: 521 VMLVQQHELDSFKEDLVQFKGIEKILRQKWAEHEVPKEEEIWEHLCDDMVPPYMPRQVDG 580
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--------NKEMGICTLYLPNNCPIQ 603
G T++S++ L+ YCS+LPSD + TPK + NK M TLYLP N ++
Sbjct: 581 GPRVTMTSAIGLVNRYCSKLPSDVFTHLTPKSRVDSVSDADGNKYMA--TLYLPINSSLR 638
Query: 604 TVIAQGNI----KTLKQAACLEACKKLHQIGALTDNLLP 638
I QG + + ++A L+AC+ LHQ G L DNLLP
Sbjct: 639 DPI-QGPVMPTRRLAEKAVALKACQLLHQAGELDDNLLP 676
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 124/231 (53%), Gaps = 17/231 (7%)
Query: 1148 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
L + E + YSF D + +++A TH SY I CYQRLEFLGDAVLDYLIT +L+
Sbjct: 1506 LSGYQQFEETVQYSFNDKAYMLQAFTHPSYHYNTITDCYQRLEFLGDAVLDYLITNHLFK 1565
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
SPG LTD+RSA VNN +A +VK+ HK++ S EL+ I+ V ++
Sbjct: 1566 DPQQHSPGALTDLRSALVNNTIFASLAVKYDYHKYLKFVSPELFNIISNFVQFQQEQGEE 1625
Query: 1268 STFGWESVTS-----------FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
++ + PKALGD+ ES+AGAI++DSG + E V++ +++P+I
Sbjct: 1626 QGMDSQTYINDEGEEESEDIEVPKALGDVFESVAGAIYLDSGMSLETVWRVYYRMMKPLI 1685
Query: 1317 TPETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRL 1364
+ + PVREL E + FS P GK VTV V G+
Sbjct: 1686 DKFSAKVPRSPVRELLEMEPETAKFS---PSERTYDGKVRVTVTVIGKGQF 1733
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 48/202 (23%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LET+GDSFLK+A + L+ TY HEG LS + R +SN L
Sbjct: 1233 ILQALTLSNAGDFFNLERLETIGDSFLKHAITTFLYCTYSRVHEGKLSYMRSRQVSNLNL 1292
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG----------DNSGSYE--------------- 1074
+LG + L + FDP + W+ PG +++GS
Sbjct: 1293 YRLGKRKGLASRMVASIFDPAVNWLPPGFCIQNNREDKEDAGSSSKDSSLDVEPGGNGMT 1352
Query: 1075 ----------------LNDDSLFNGRKIY------VTGRKKVKSKTVADVVEALIGAFLS 1112
L L NG I + + K++AD VEAL+G +L+
Sbjct: 1353 TSKNPIAQVTGYDVTPLKASVLVNGDAIKRLLSYDLHMEHCIADKSIADCVEALLGCYLT 1412
Query: 1113 TGGENVGLIFLDRIGIKVDFVN 1134
T G +FL +G+KV +++
Sbjct: 1413 TCGPRAAQLFLCWLGVKVSYLD 1434
>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1496
Score = 243 bits (620), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 203/667 (30%), Positives = 322/667 (48%), Gaps = 70/667 (10%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL---LRKPSP 68
++V+ LP R YQ E A ++N I L+TGSGKT I+ +L++ A L K
Sbjct: 5 QDVNEALLP--RRYQEEIFSRAQERNVIAALDTGSGKTYISTLLIKWIAARDAGLGK--- 59
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
+ VFLVPKV LV QQ + I T L+V K +G +D D W++E+ H+VLVMT Q
Sbjct: 60 -IIVFLVPKVALVEQQGDFIARETPLRVSKCYGATAIDMTDRRGWRKEIELHDVLVMTAQ 118
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L+ L S++ ++ + +++ DECHH R H Y IM E++ E P++FGMTA
Sbjct: 119 IFLNILTHSHWTMDKVSLMVFDECHHTRKNHAYNGIMREYFQWTSE----KRPKVFGMTA 174
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASE-SVLSNFIPFSTAKFKFYKYDEI-- 245
SPI + +D + + LE +++KV L++ P + Y+ I
Sbjct: 175 SPIWNP-----RDAVESLATLERNLDAKVIAVREHVEELADHSPRPQEVLREYQASPITY 229
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL 305
PH T+L LA+ L + + E +R + +L +EL ++ +
Sbjct: 230 PHYPATNLWARLALDSLPPSFDIP--------VEKVRTRFEVTYHSLGPYGAELFLYHDI 281
Query: 306 K--AAETISCYES--DFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG--AEWSIGDDS 359
K A+ IS E ++ LDG I+ A LV S D
Sbjct: 282 KHRIAQFISQAEDHMEYMNTTHLDGVQPEGIQLPPELAHMELVLQQFSDFFDNEDDPDTV 341
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
+D + K+V L + L EY ++ + IIFVE+ A L +L + P +K+
Sbjct: 342 PIRIDLKWCSPKVVLLSQLLFEYYK-QNFQGIIFVEQRHVAACLSKMLPRIPPLELYFKS 400
Query: 420 KYIAGNN------SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
+ G+ S ++ + K Q E V+ FR G N++VATS+ EEGLD +C LV+ F
Sbjct: 401 AQLIGHGASSVQKSQVRGMALKSQQEAVKMFRDGECNLLVATSVAEEGLDFPACELVVRF 460
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP- 532
DP + + +IQSRGRAR + + +++MV+ G ++ R + + S ++R + LP
Sbjct: 461 DPIQHMVGYIQSRGRARQKAATFMVMVQEGQASHVDRYKAFSESEPQLRLVYQNREDLPK 520
Query: 533 -------------CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
PL+ + + Y V +TG I T ++++ L+ CS +P D +
Sbjct: 521 PVQDDELEEGEEREDPLD--LAERERYVVPNTGAILTYNTAIGLLNHLCSLIPRDRF--- 575
Query: 580 TPKFHINKEMGI--CTLYLPNNCPIQ------TVIAQGNIKTLKQAACLEACKKLHQIGA 631
TP H+ + G TL LP++ P+ T + K K+AA A K+LH++G
Sbjct: 576 TP-IHLPQYSGDFEATLQLPSSLPLPKEHLTFTGPTKRTKKEAKRAAAFMAVKRLHELGV 634
Query: 632 LTDNLLP 638
+ LLP
Sbjct: 635 FDNYLLP 641
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 205/427 (48%), Gaps = 40/427 (9%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK--- 980
P LCR AP+S + + +P + HRL L A ++ L +P I+
Sbjct: 896 PMSLCR--WAPLSPDVYRALRVLPELTHRLTDLYRARAIRAEL--------GLPPIQDDL 945
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+++A+T F+ + LETLGDS LK LF + + HEG L + + +SN L
Sbjct: 946 MIQALTLPSANAGFNNQRLETLGDSVLKLCTVVHLFNRFPHRHEGQLDILRRNSVSNRTL 1005
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELND--DSLFNGRKIYVTGRKKVKSKT 1098
E L ++ +E ++W SG +L+D F R+I ++
Sbjct: 1006 LARAKEVMLEQYLTSEPQTMRIWRFA--LSGEVDLSDPMPDRFVSRRI--------PKRS 1055
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV--RHLES 1156
+ D +EA +GA +TGG + L + + + ++ E V V ++
Sbjct: 1056 LQDCMEASLGAGFATGGIMMAL-HVGTALGLGFGGTLLWPARYDRLPETPVPVMFHEVQE 1114
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
+L Y F+ LL+EA+TH S+ P YQRLEF+GDA++D ++ YLYNK+P + G
Sbjct: 1115 ILGYEFKSGHLLIEAVTHPSFRSP-TNSSYQRLEFMGDALIDLVVMRYLYNKFPTATSGQ 1173
Query: 1217 LTDMRSASVNNDCYALSSVK-HGLHKHILHASHELYKRINITVDSFEKLSLGSTF--GWE 1273
L+ RS +V A +V GLH+ +L + EL I+ V ++ S GW+
Sbjct: 1174 LSWARSRAVCAPALAHIAVNVLGLHRPLLINNIELSMAISKYVPILQETSEEEIIHSGWK 1233
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNRE----VVFQSIRPLLEPMITPETMRFHPVREL 1329
PKA+ D++ES+ GA+ VD+ N E + ++R LL +++P+ R PV EL
Sbjct: 1234 H--DPPKAISDVLESILGAVLVDTHYNFEKTAVIAENALRGLLR-VLSPDMPR-DPVSEL 1289
Query: 1330 TEYCQKN 1336
+ +
Sbjct: 1290 MVWIARQ 1296
>gi|170049284|ref|XP_001855187.1| endoribonuclease Dicer [Culex quinquefasciatus]
gi|167871117|gb|EDS34500.1| endoribonuclease Dicer [Culex quinquefasciatus]
Length = 1665
Score = 243 bits (620), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 283/1069 (26%), Positives = 450/1069 (42%), Gaps = 149/1069 (13%)
Query: 10 TTEEVSA-DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP 68
T EE D +P R YQ + + + +NTIV+L TG+GKT IA+M +R P
Sbjct: 3 TIEETQKEDFVP--RFYQSQMKDVCIAKNTIVYLPTGAGKTHIALMAIRELGRRGHLEKP 60
Query: 69 FV-----AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
F+V V L QQAE I + K Y D VD W W EE +K++++
Sbjct: 61 LSQGGKRTFFIVNTVALAKQQAEMIGRNVVFKTSVYTSDRDVDTWKQDRWLEEFAKYQII 120
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI 183
V T QILLD L+ Y ++ I +L+ DECHH G H IM ++ L + PR+
Sbjct: 121 VCTCQILLDVLKHGYLAMSHINLLVFDECHHGVGDHPMHGIMEQY----LRARKEDRPRV 176
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA------KF 237
G++ + ++ EQ Q++ LE +S + T S + FST F
Sbjct: 177 IGLSGMLLYKELKMKEQ-VAQELERLENTFDSTIATVGSYDAYTEVCRFSTDPKEGLLSF 235
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKV-SKINSTLLYCL 296
+ ++ L + D + + L L N + + + KKV +K L Y
Sbjct: 236 HVVQSSDVMRNLQGQINDFINKVALFDLPKLLNQNKSLMRDMPKPKKVITKYFKELNYQF 295
Query: 297 SELGVW------LALKAAETISCYESDF----FAWEQLDGFGETIIKKFGSDASQALVTY 346
+LG++ L L + ESD + F E + + +
Sbjct: 296 EDLGLFGGAIALLGLIVQFELDKRESDHTMLRLLYRSCITFCENLRHQLEN--------- 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
V G E K L S + +++ +E + + +IFV+R +A V+ L
Sbjct: 347 VMQGLEIK----KKLTLFSSIKARQLIAQLEGFYKEGRSRKTKTLIFVQRRFSAKVVYHL 402
Query: 407 LSELLPRHCTWKT---KYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L +T ++ G N + Q S KK ++E F++ NVIV T++L
Sbjct: 403 LKIYFSETENAETILPDFMVGCNGTMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVL 462
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
EEG+D+Q CN VI FD T S+ QS+GRARM++S Y +M+ S + L+ YL
Sbjct: 463 EEGIDLQMCNSVIKFDYPETFASYEQSKGRARMKDSTYTVMLDS--DKREKFLKKYLLYK 520
Query: 519 N---KMRKEVLSHASLPCSPLNNHMYGE-------DFYHVESTGTIATLSSSVSLIYFYC 568
++R+ ++ PL + E FY G SS+ L+ YC
Sbjct: 521 EIEEELRRALVGKTINRPEPLEADVTKELTNELIPPFY--TKKGAKLDALSSIQLLNRYC 578
Query: 569 SRLPSDGYFKP--TPKFHINKEMG--ICTLYLPNNCPIQ-TVIAQ--GNIKTLKQAACLE 621
+P D + T + H +K G + + LP ++ V Q N+K K++A E
Sbjct: 579 MGMPRDAFTNTNVTWERHDDKYTGKIVVAVLLPLQSTVRDKVFGQPMTNVKLAKRSAAFE 638
Query: 622 ACKKLHQIGALTDNLLP-----------DIVV------EKHDAQKRGNEPYNAEHPIYFP 664
AC+KL++ G L D+L+P ++ E+ A++ G + H I +P
Sbjct: 639 ACRKLYEAGELNDHLIPIDSKRQLANVSEVYFRHWKQFEEESAKQAGTQKNVRNHQIRYP 698
Query: 665 PELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLE----- 719
+ PQ K Y Y++ + FN D+ NI T SE NF +
Sbjct: 699 SQTSGCCPQPGKPCY-IYVLRIAAGFNSDVQNENIE-TFHTLYSSE---NNFGIMTTKPL 753
Query: 720 --VERGRLTVNLKHLGRIQLIPNQVLL-----------CRRFQITLFRVIMDHNLDKLNE 766
+ R + V+L L + L P + + ++FQ+ LFR ++ L K
Sbjct: 754 PVLARMKFFVSLG-LINVHLDPTPIRVENAGSDADLAALKQFQLMLFRDVL--RLWKEFL 810
Query: 767 ILDGFELRDNLEIDYLLLP-STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK 825
+LD N +L++P + + IDW+ V F ST+ +R+V
Sbjct: 811 VLDS----SNEANSFLVVPLAQSRQIDWQVVKDFPF-----LAQPSELSTVARSRMVFD- 860
Query: 826 SGPLCTCKIHNSLVCTP----HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERY 881
K + V P + Y +T V HL S F N TY+ ++ Y
Sbjct: 861 ------AKQYRHRVILPWYRTDRERAYVVTAVHEHLTPGSPFP--NEKYQTYEDYFGTVY 912
Query: 882 GIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKI---SFE--LPPELCRIIMAPIS 936
G Q+C ++ L+ + I N LS + K ++ +F L PELC P
Sbjct: 913 GQQICNKKQFLIEVKGITTWLNRLSPGDEDDGKSATRAKNWTFHEILIPELCHNFAFPAD 972
Query: 937 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH----CMQNVTIPTIKV 981
+ T +PS +HR+ LLLA N++ L C++ T+ + V
Sbjct: 973 Y--WLKATLLPSALHRINFLLLAENIRVELATEANVGCLECRTVEDVDV 1019
Score = 174 bits (441), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 195/413 (47%), Gaps = 78/413 (18%)
Query: 974 VTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKER 1033
V + +++A+TTK + + LE E LGD+FLK++ S L K ++ HEG L+ K +
Sbjct: 1177 VPLQQCAIIKALTTKSAHDVYDLERYELLGDAFLKFSVSLFLVKKHKEWHEGHLTAVKGQ 1236
Query: 1034 IISNAALCKLGCEQKLPGFIRTESFDPKM-WIIP-------------------------- 1066
++SN L LPG ++ +FDPK W P
Sbjct: 1237 LVSNRNLLYCAMLINLPGMMKIHTFDPKNDWSPPLASVPHAVKQKMASINHSARVLYKLK 1296
Query: 1067 ----------------GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAF 1110
D ++ SL ++ + K AD +EA++G
Sbjct: 1297 MSEEEIQAGTIEKDKYEDFIAELDVQSRSLDTSPMQNYLSQQAMGDKMPADSMEAMLGVC 1356
Query: 1111 LSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-------------VNVRHLESL 1157
+ST G L +GI N+ ++ +RL ++ +E +
Sbjct: 1357 VSTVGIKRSFRLLSFLGILPKKENLTTLLDDRIANQRLKADVTKNEVDSFLISPGRIERI 1416
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
L+Y+F+D + L++ALTH SY I YQ+LEF+GDAVLD+LI+ Y+Y + P +SPG L
Sbjct: 1417 LDYTFKDRTYLLQALTHASYPTNRITGSYQQLEFVGDAVLDFLISAYIYEQNPTMSPGQL 1476
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRINITVD 1259
TD+RSA VNN A V+HGLH +IL S HE+ ++N+ +
Sbjct: 1477 TDLRSALVNNITLACILVRHGLHLYILSESASLTDTVSKFVAFQEAHKHEITDQVNLLSE 1536
Query: 1260 SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
E+ G+ + V PKALGD+ ESL GA+F+DSG + EV ++ I L+
Sbjct: 1537 ESERCQ-GAMAEFVDV---PKALGDVFESLIGAVFLDSGNDLEVTWRVIYGLM 1585
>gi|444841767|gb|AGE12616.1| Dicer 2 [Laodelphax striatella]
Length = 1654
Score = 242 bits (618), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 283/1090 (25%), Positives = 489/1090 (44%), Gaps = 152/1090 (13%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
++ EEV D AR+YQ E L A++ N I++L TGSGKT +A M+++ ++ + K
Sbjct: 14 DTKEKEEVINDEF-VARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMIIKHFSADIEKK 72
Query: 67 ---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
A FLV V LV QQA +I+ T ++G+Y G G D W WK E+ V+
Sbjct: 73 LSEGGKRAFFLVNTVQLVEQQALSIQHQTTFEIGQYTGQTGCDLWSEDVWKRELDNKSVI 132
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI 183
VMT QILL+ L Y KL+ I+V++ DECH+A H CIM F L D P +
Sbjct: 133 VMTAQILLNLLTHYYLKLSNIRVIVFDECHNAVKDHPMRCIMKFFEGVTLVPPDQQ-PHV 191
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAK----FKF 239
G+T S + S + S + I DLE S++ T +ES+ +S F
Sbjct: 192 VGLTGSLLNSAIDESRVPEY--IRDLEATFQSRIITSVNESMALAIARYSADPQQVIVPF 249
Query: 240 YKYDEIPHALYTHLADEL-AMIELKHTRSLENLDLNEAQAELIR----KKVSKINSTLL- 293
+ + +L T +++ L ++ + +L+ D++ Q R +++ K+N L+
Sbjct: 250 SPGNHMLSSLCTDVSEVLDGVMRIIGKLNLKVEDVHIPQKPSSRAIQMEELQKLNKKLVN 309
Query: 294 ------YCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV 347
Y + LG + KAA + L+ + + ++ L+TY+
Sbjct: 310 MIVDVKYQMENLGAYGGFKAALAMMIL---------LERKKRSAQLQVHANTYHFLITYL 360
Query: 348 PSGAEWSIGDDSKFNLDSGL---LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQ 404
+ SK+ + + ++ K++ L+E L +++ E R +IFV R T LQ
Sbjct: 361 TYVRKMFTDVISKYEGEERIKLFVSNKVLKLVELLADFK--ETDRALIFVTRRFTCKCLQ 418
Query: 405 SLLSEL-LPRHCTWKTKYIAGNNSGIQCQSR-----KKQNE-IVEEFRRGLVNVIVATSI 457
+L +L LP K+ +I G NS +R KK N+ +++ F +G N ++A+ +
Sbjct: 419 YILEDLKLP---NVKSDFIVGYNSNPFNDTREGLLEKKVNKRVLKSFNKGKKNFLIASDV 475
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLAS 517
LEEG+DVQ CN+V+ F P T+ S+IQS+GRAR + S Y ++ ++ +S ++ +
Sbjct: 476 LEEGIDVQICNMVVKFAPPTTMRSYIQSKGRARSRISKYYILTETSNSECYRKISKFETL 535
Query: 518 GNKMRKEVLSH---ASLPCS-PLNNHMYG---EDFYHVESTGTIATLSSSVSLIYFYCSR 570
+++ E++ +LP LN ++ + F+ + G S+ +SLI YC+
Sbjct: 536 EARLKYELVGKFLDRTLPTQEELNESIFKAQMKPFFPLGPDGPKIEGSTPISLINRYCTS 595
Query: 571 LPSDGYFKPTPKFHINKEMGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQAACL 620
L D + +P + + + C L LPN+ P++ +I A +I+ K++A L
Sbjct: 596 LDCDKFSTLSPFWWKERVVTDCHEQKIIVYLQLPNSSPVRQIIKSDAFPSIELAKRSAAL 655
Query: 621 EACKKLHQIGALTDNLLP--------------------DIVVEKHDAQKR---------G 651
+ACK L++ L +N+LP + V++ D G
Sbjct: 656 KACKLLYESQELDNNMLPCGKRSQQLQNKNLYPCWRDDEPPVDEADGDATSQFKKLSPVG 715
Query: 652 NEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN----------YDISARNIVL 701
+ + +P FP + P+ K Y ++I++K + YDI +
Sbjct: 716 TKKCKSIYPKKFPACIYECRPEPGKKVY-MHIIKMKPVYEEPKGPRKKAFYDILNSDFGY 774
Query: 702 AMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPN-QVLLCRRFQITLFRVIMDHN 760
A + + + F L + G + + +K QL+ ++ FQ +F ++
Sbjct: 775 AFLSTKQWPT-LLKFPLFLTIGEIQIEVKMNEECQLLTQKEIDEIFNFQCVIFSDVL--- 830
Query: 761 LDKLNEILDGFELRD--NLEIDYLLLP---STGQ-LIDWKTVATVLFPRDNGSKHNMNCS 814
+ ++ F RD N E YLL P G+ +I+W + R+N + +
Sbjct: 831 -----QCINTFMSRDYENEEHSYLLAPIKLDAGRPVINWGVI------RNNQEFPEIKPT 879
Query: 815 TMFNARIVHTKSGPLCTCKIHNSLVCTP-HNG----QIYCITGVLGHLNANSLFTRNNGS 869
T + + T +++ V P + G Q Y +T + A S F +G
Sbjct: 880 T------AEERENIVVTEEMYKHSVVIPWYRGFLPRQAYIVTDLSKTETALSDFP--SGE 931
Query: 870 VTTYKKHYEERYG--IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEP-------SKIS 920
TY+ ++ +Y QL +PLL R + N L + RQ Q +
Sbjct: 932 YPTYENYFVTKYANVEQLYSAHKPLLEVRALSKKLNCL-RPRQIVQATSKRKKKQEEEFE 990
Query: 921 FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDHCMQNVTIPTI 979
L PELC I + + + + T +PS +HR+ LLLA L+ + D + V +P
Sbjct: 991 ESLVPELC--IRSNVPAAYWLKSTLLPSCVHRITYLLLADELRVKIATDLNLGTVLLPQG 1048
Query: 980 KVLEAITTKK 989
K +T +
Sbjct: 1049 KSWRPMTVDQ 1058
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 182/394 (46%), Gaps = 84/394 (21%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
VL+ +T + F+LE LETLGDSFLKY+ S LF + EG L++ K +II N L
Sbjct: 1175 VLQVLTAASAHDIFNLERLETLGDSFLKYSVSLILFTRFPELSEGQLTMIKGKIIGNRNL 1234
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG------------------------------DN 1069
G E++L I+T F+ + W+ PG +
Sbjct: 1235 FYCGEEKELGSIIKTVEFNTESDWVAPGFCVDRTVQRLLRELSVNPRYLYEIELTKEERD 1294
Query: 1070 SG----------------SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLST 1113
SG S+E D N + ++ V +KTV+D VEAL+G + +
Sbjct: 1295 SGQLSESTRDMIENKLYDSWE-EDTDYANYSNAHFISQQVVSNKTVSDSVEALLGLCIKS 1353
Query: 1114 GGENVGLIFL------DRIGIKVD----------FVNVPYQRQFQVHAERLVNVRHLESL 1157
G G L D IK D +++ F +H +LE L
Sbjct: 1354 FGIEKGFEILRWLKVTDPNLIKPDAYVEKKVEPTILSMIGDINFHIHQPD-----YLERL 1408
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+NY F+ + L++AL+H +Y I YQRLEFLGDA+LD+LIT +++ L+PG L
Sbjct: 1409 INYKFKQRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLITTHIFEHCDNLTPGEL 1468
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS------------ 1265
TD+RSA VNN A +V+ GLHK +L S +L K I V+ E
Sbjct: 1469 TDLRSALVNNVTLASIAVRIGLHKFLLLRSFQLSKVIESFVERQESRQHEFTDQTLYLIN 1528
Query: 1266 -LGSTFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
+ S G PK LGD+ ESL GAIF+DS
Sbjct: 1529 EIDSNVG--ECIEVPKILGDVFESLVGAIFLDSN 1560
>gi|388565188|gb|AFK73581.1| dicer-2 [Nilaparvata lugens]
Length = 1656
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 203/683 (29%), Positives = 333/683 (48%), Gaps = 76/683 (11%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
++ EEV D AR+YQ E L A++ N I++L TGSGKT +A M+++ + + K
Sbjct: 14 DTKEKEEVINDEF-VARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMIIKHFGADIEKK 72
Query: 67 ---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
A FLV V LV QQA++IK T VG+Y G G D W WK E+ V+
Sbjct: 73 LSEGGKRAFFLVNTVQLVEQQAQSIKRQTTFTVGEYTGQTGCDLWSEQIWKRELDNKSVI 132
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI 183
VMT QILL+ L SY KL+ I++++ DECH+A H CIM F + S P +
Sbjct: 133 VMTSQILLNLLSHSYLKLSNIRIIVFDECHNAVKDHPMRCIMKFFEN----VPASQQPHV 188
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD 243
G+T S + S + + + + I +LE S++ T +E++ +ST + +
Sbjct: 189 VGLTGSLLNSTIDEGKVNEY--IRELEATFLSRIITSVNENMALAIARYSTDP----QQE 242
Query: 244 EIPHALYTHLADEL------AMIELKHTRSLENLDLNEAQAEL--------------IRK 283
+ + TH+ EL + +L NL + E L + K
Sbjct: 243 MVAFSPGTHMRSELCTSINIVLDSAIRNVTLFNLKMEEDFVPLKPSIHAIAMEENNKLNK 302
Query: 284 KVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQAL 343
K++ + + Y + LG + A KAA + L+ + + + A Q L
Sbjct: 303 KLANMIVDIKYQMENLGAYGAYKAALAMMIL---------LERKKRSAQLRKHAAAFQYL 353
Query: 344 VTYVPSGAEWSIGDDSKFNLDSGLL---TEKIVCLIESLLEYRGVEDIRCIIFVERVITA 400
T + + S SK+ + ++ + K++ L+E ++ E + +IFV R +
Sbjct: 354 CTMLTLVRKISFDVLSKYEGEERIIRFVSNKVLKLLELFKGFK--ETDKALIFVTRRFSC 411
Query: 401 IVLQSLLSEL-LPRHCTWKTKYIAGNNSGIQCQSR-----KKQN-EIVEEFRRGLVNVIV 453
LQ +L +L LP K+ +I G N+ +R KK N ++++ F G NV++
Sbjct: 412 KCLQYILEDLKLP---NVKSDFIVGYNTNPFNDTREGLLEKKVNKKVLKRFNGGDTNVLI 468
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
A+ +LEEG+DVQ+CN VI FDP T+ S+IQS+GRAR + S + +M ++ D + ++
Sbjct: 469 ASDVLEEGIDVQTCNTVIKFDPPTTMRSYIQSKGRARTRQSKFYIMTEAKDYKVEGKINK 528
Query: 514 YLASGNKMRKEVLS---HASLPCSP-LNNHMYG---EDFYHVESTGTIATLSSSVSLIYF 566
+ K++ E++ SLP L N ++ + FY + G S+ ++LI
Sbjct: 529 FERLETKLKHELVGKFLERSLPSEKELANSIFKTTIKPFYPLGPDGPKIEGSTPIALINR 588
Query: 567 YCSRLPSDGYFKPTPKF--HINKEMG------ICTLYLPNNCPIQTVI---AQGNIKTLK 615
YC L D + TP + ++K+ G + L LP + P++ VI A N++ K
Sbjct: 589 YCMSLDCDRFSTLTPFWWKEVSKKNGFNENNIVVYLQLPISSPVRDVIKSDAFPNVELAK 648
Query: 616 QAACLEACKKLHQIGALTDNLLP 638
++A L+ACK L+ L D +LP
Sbjct: 649 RSAALKACKLLYDSRELDDKMLP 671
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 188/389 (48%), Gaps = 77/389 (19%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L+ +T + F+LE LETLGDSFLKYA S LF + EG L++ K ++I N L
Sbjct: 1179 LQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIKGKVIGNRNLF 1238
Query: 1042 KLGCEQKLPGFIRTESFDPKM-WIIPG---DNSGS-------------YE--LNDDSLFN 1082
G ++ L I+ F+ + WI PG D + YE L+ D +
Sbjct: 1239 YCGEQKGLGSIIKAVEFNTESDWIAPGFCVDRTVQNLFRELNINPRYLYEIPLSRDEIEC 1298
Query: 1083 GR--------------------------KIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 1116
G+ + ++ +KTV+D VEAL+G ++ + G
Sbjct: 1299 GKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVTSNKTVSDSVEALLGLYIQSYGL 1358
Query: 1117 NVG---LIFLDRIGIKVDFVNVPYQRQ-------------FQVHAERLVNVRHLESLLNY 1160
G L +L I K+ +V +++ F +H + +LE L+NY
Sbjct: 1359 EKGFDMLRWLKVIDPKLITPDVYTKKKVEPTILFKGGQIDFHIH-----HPDYLEKLINY 1413
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F+D + L++AL+H +Y I YQRLEFLGDA+LD+L+T ++Y L+PG LTD+
Sbjct: 1414 KFKDRTFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYEYCDNLTPGELTDL 1473
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK----LSLGSTFGWESV- 1275
RSA VNN A +V+ GLHK +L S +L K I V+ E S + F + +
Sbjct: 1474 RSALVNNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVERQESRNHDFSDDTLFLIDEID 1533
Query: 1276 ------TSFPKALGDIIESLAGAIFVDSG 1298
PK LGD+ ESL GAIF+DS
Sbjct: 1534 CIIGESIEVPKILGDVFESLVGAIFLDSN 1562
>gi|357607884|gb|EHJ65725.1| dicer-2 [Danaus plexippus]
Length = 1871
Score = 239 bits (610), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 279/1082 (25%), Positives = 462/1082 (42%), Gaps = 177/1082 (16%)
Query: 9 DTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP 68
D + + LP R YQ + E A+K+NTI+FL TGSGKT IAI L++ L+KP
Sbjct: 193 DKMDATDDEILP--RLYQTQLEEIAVKKNTIIFLPTGSGKTHIAISLIKRLRDTLQKPWG 250
Query: 69 FVA---VFLVPKVVLVPQQAEAIKMHTDLK-VGKYWGDMGVDFWDGATWKEEMSKHEVLV 124
F FLV V LV QQ + I+ + V + G+ VD+W+ A W E+SK++V+V
Sbjct: 251 FGGKRCFFLVNTVPLVAQQKKTIERSCPVHGVAGFSGEDNVDYWNKAQWDSELSKYQVIV 310
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIF 184
MT QIL D L Y +L I +LI DECHH H IM F L + PR+
Sbjct: 311 MTCQILSDMLTHQYLQLKDISLLIFDECHHGVEDHPMRLIMKHF----LNCPKNEQPRVL 366
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE 244
G+TA+ + S V ++ + I LET + + T ++ + + +Y+
Sbjct: 367 GLTATLLNSNVKLNK--IQETIRHLETTFQASIATADDMGEVAMYSTNPREQLLYYRRPS 424
Query: 245 IPHA------LYTHLADELAMIELKHTRSLENLDLNEAQAEL------IRKKVSKINSTL 292
A L L + EL +T +++L Q ++ I K V + ++
Sbjct: 425 ATPAASEAVDLLRRLQQIVLQFELPNTVQKHDIELEPHQRDITGDPKKIIKAVKNMIESM 484
Query: 293 LYCLSELGVWLALKA--AETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG 350
+ + +LGV++ A ++ +A Q++ T+ +A L+
Sbjct: 485 ILSICDLGVYVGALGLLANIVALERRKRWASSQVEELLYTVTITAAVEARSVLLD----- 539
Query: 351 AEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIR------------C-IIFVERV 397
S+ ++S + +EK V L+ L EY +R C +I ++
Sbjct: 540 ---SMKNESGYEKIIRHSSEKTVQLLNILKEYNPRTPVRRALKVNQERNALCGLILTQQR 596
Query: 398 ITAIVLQSLLSELL----PRHCTWKTKYIAGNNSGIQCQSRKKQ-NEIVEE-----FRRG 447
TA +L +LL ++ K +I G N C +R++ N+ + E F+ G
Sbjct: 597 FTAKILYNLLKDVAEVNKEEFGFLKHDFIVGFNISPLCSTREQHYNKKISEQALLKFKNG 656
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS-- 505
+N ++ATS++EEGLDV C LV+ +D S+IQS+GRAR + ++++++V +
Sbjct: 657 DLNCLIATSVVEEGLDVPQCTLVLRYDVPLEYRSYIQSKGRARNKKANFVILVDEENRQK 716
Query: 506 -TTQSR----LENYLAS---GNKMR--------KEVLSHASLPCSPLNNHMYGEDFYHVE 549
+Q R +E+YL G ++R KE L+ C P G + V
Sbjct: 717 FNSQYRAFQQVESYLNGMLCGGEVRNTPSEAEVKENLNDDD--CIPAYKTRNGNSLFAV- 773
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG---ICTLYLPNNCPIQTVI 606
S++SL+ YCS LP D Y P G + T+ +P CPI+ +
Sbjct: 774 ---------SAISLLNRYCSVLPHDQYTTILPMVIQEPAQGNKTMVTIIMPIACPIKEPV 824
Query: 607 AQG----NIKTLKQAACLEACKKLHQIGALT-DNLLPDIV-------------------- 641
QG ++K K++A L C KLH+ G L + LLP +
Sbjct: 825 -QGRPMSSVKNAKRSAALNVCIKLHKAGELDYETLLPKVKGLIDFSTTDVSSCFPNWRDE 883
Query: 642 VEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVL 701
E D G + +HP+++P L +D + ++I+L+ F+ AR L
Sbjct: 884 TEVSDEGPPGTKKRVRKHPVHYPKCLDGPKTRDELTKCYLHVIKLETAFDEPSDAREKAL 943
Query: 702 AMRTELESEIKKVNFD-----------LEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQI 750
+ + FD L V R T+ + + I L + + L ++F
Sbjct: 944 YDMLRRKEGYGFITFDRLPELCAFPMFLTVGEVRTTLQVNYAA-IILDTSHLELIKQFHF 1002
Query: 751 TLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP---STGQLIDWKTVATVLFPRDNGS 807
+F D++ EI F + D + +P G IDW + T
Sbjct: 1003 FIF--------DQVLEIAKKFLVHDGRVNNLYAVPLKYDNGYDIDWNVMQTY-------- 1046
Query: 808 KHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP-HNGQI----YCITGVLGHLNANSL 862
K C + ++ T +++++ V TP + G + Y ++ VL +L S
Sbjct: 1047 KQIAPC----DEPTAQERASLSVTKEMYDNCVVTPWYRGSLHPDRYIVSRVLEYLTPYSK 1102
Query: 863 FTRNNGSVTTYKKHYEERYGIQLCFDR-EPLLNGRRIFHVQNYL------SKCRQQKQK- 914
F N S T+ +Y +Y +++ + +PLL R I N L + KQ+
Sbjct: 1103 FEDN--SFETFADYYSNKYNLEILGRKDQPLLEVRNISSRMNCLLPRAATIRGLSDKQRR 1160
Query: 915 ---------EPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNM 965
+P + + PE C + A +Y +PSI+HR+ LL+A L+
Sbjct: 1161 LASLAHGDYKPREFTELFVPEYC--VRADYPAHLWYKAIILPSIVHRVTMLLIAEELRVQ 1218
Query: 966 LL 967
+L
Sbjct: 1219 IL 1220
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 202/436 (46%), Gaps = 91/436 (20%)
Query: 980 KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+VL A+T K + F+LE ETLGDSFLK+AAS LF + EG L+ K R+I N
Sbjct: 1383 EVLSALTLIKSNDTFNLERSETLGDSFLKFAASLYLFHKFPQMDEGQLTNLKSRLIGNRN 1442
Query: 1040 LCKLGCEQKLPGFIRTESFDPKM-WIIPG------------------------------D 1068
L G L G ++ E F P+ +++PG
Sbjct: 1443 LYYAGERAGLAGRMKVEQFSPRSDFLVPGFLAPSELVSFITRRKIRPTFLIGVQFPVEDA 1502
Query: 1069 NSGSYELNDDSLF-------------------NGRKIYVTGRKKVKSKTVADVVEALIGA 1109
SG+ SL N + YV G + V K+VAD VEALIG
Sbjct: 1503 LSGNLSPESRSLLQEKLKDSDLAEEEPFGKAQNAMQRYV-GAQAVSDKSVADCVEALIGT 1561
Query: 1110 FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV------------------ 1151
+L +GG D + I F +P + +F + VN
Sbjct: 1562 YLLSGG------ITDAVSILEWFKIIPSEDKFLSFLTKKVNTVISEGKATVQEVDWLLNS 1615
Query: 1152 --RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+E++L Y F+DPSLL+EAL+H SY+ R Y+RLEFLGDA+LD+LIT Y+Y
Sbjct: 1616 CRSDIETILGYKFKDPSLLLEALSHASYIRNRYTRSYERLEFLGDAILDFLITAYIYENC 1675
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA-SHELYKRINITVDSFEKLS--- 1265
LSPG LTD+RSA VNN +A V+ GLHK+ + L I V+ E+L
Sbjct: 1676 GDLSPGDLTDLRSALVNNVTFASYVVRLGLHKYFCSQFNGVLENAIKTFVEHQEQLDHVL 1735
Query: 1266 LGSTF--------GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
L PKAL DI ESL GA+F+DSG + ++V++ I ++ I
Sbjct: 1736 LEDVLYLIEEEDCNIAQYIDVPKALSDIFESLTGAMFLDSGGDLKLVWKVIYRIMHKEIH 1795
Query: 1318 PETMRF--HPVRELTE 1331
+M+ PVR L E
Sbjct: 1796 DFSMKVPKQPVRVLME 1811
>gi|312069719|ref|XP_003137813.1| hypothetical protein LOAG_02227 [Loa loa]
gi|307767024|gb|EFO26258.1| hypothetical protein LOAG_02227 [Loa loa]
Length = 1928
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 319/668 (47%), Gaps = 80/668 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A K+N IV L TGSGKT IA++L++ Y L P A FLV KV
Sbjct: 16 RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTSKLVIPWKSGGKRAFFLVDKVS 75
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQA I+ HT L VGK G + D W + A + ++ HEV V+T QI LD L +
Sbjct: 76 LVGQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDAFIALHEVTVLTAQIFLDLLDHGF 135
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
F ++ V+I DECHH G KH Y IM HR + + + PRI G+TAS I SK+
Sbjct: 136 FNMSNAAVIIFDECHHVLGSKHPYRLIM----HRYGQLTEVDRPRILGLTASLISSKIPP 191
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
+ + Q + LE +M S + T S+ + S K +Y + H + +
Sbjct: 192 NSLE--QLLEKLERIMYSSIETA------SDLLSISKYGAKPKEYVIMCHDFFCCSCE-- 241
Query: 258 AMIELKHTRSLEN-----LDLNEAQAEL---IRKKVSKINSTLLYCLSELGVWLALKAAE 309
I K +LEN L E E RK V + + L +LG W A K +
Sbjct: 242 --ISKKVVDTLENLRTFCLKCTEFHPEFDVDPRKPVLEAVNRTKSVLEQLGPWCAWKVCQ 299
Query: 310 TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT---YVPSGAEWSIGDDSKFNLDSG 366
F + G+ + + Q T + + + FN
Sbjct: 300 --------LFQRQLKKHSGQGFLPEKQVIFLQMAYTTMRFTKRLLDAKVASVRCFNDMKP 351
Query: 367 LLTEKIVCLIESLLEY--RGVEDIR-----C-IIFVERVITAIVLQSLLSELLPRHCTWK 418
+L +++ L E L Y +E + C I+FVE+ A VL +L+ + W
Sbjct: 352 ILPDRLSRLFEILKFYSPSNMEKVDPDFTFCGIVFVEQRYVAYVLNTLIRAI----SRWD 407
Query: 419 --------TKYIAGNNSG-IQCQS----RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
+ +I G NS I + K+Q ++ +FR+ +N+++ATS+LEEG+DV+
Sbjct: 408 SDKFGYLVSDFIIGYNSANISAEETMALHKRQELVLRKFRQRHLNLLIATSVLEEGVDVR 467
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR-LENYLASGNKMRKE 524
CN+VI FD +++QS+GRAR + Y L+V+ D SR L+++L + K
Sbjct: 468 QCNVVIRFDRPTDYRAYVQSKGRARKDGASYFLLVEERDREQCSRDLKDFLQIERMLLKR 527
Query: 525 VLSHASLPCSPLNNHMYGEDF----YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
+ + P ++ + D Y VESTG TL+S++ L+ YC++LPSD + +
Sbjct: 528 YQNVHNPPEPTISPSIEAMDDIIAPYTVESTGAQVTLTSAIGLVNRYCAKLPSDIFTRLV 587
Query: 581 PKFHINKE------MGICTLYLPNNCPIQTVI----AQGNIKTLKQAACLEACKKLHQIG 630
P+ I E M L LP N PI+ I G+ K + A LEAC++LH+
Sbjct: 588 PQNTIVPETVGDHVMYRAELLLPINSPIKETIKLKKPLGSKKLAQMAVALEACRRLHKRK 647
Query: 631 ALTDNLLP 638
L D LLP
Sbjct: 648 ELNDYLLP 655
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 174/340 (51%), Gaps = 48/340 (14%)
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYQ 1138
++ + K++AD VE+LIGA L G L F+ +G+KV F++ Q
Sbjct: 1586 QQSLGDKSIADAVESLIGAHLLELGPTATLRFMKWLGLKVLTEPVQVEPPLLRFIDTTEQ 1645
Query: 1139 RQFQVHAERLVNVR----HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1194
+ + V+ LE + Y F D + L++A TH SY I CYQRLEFLGD
Sbjct: 1646 PDKSLRKLNDLWVQFQFSKLEDFIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGD 1705
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVLDY+IT +L+ SPG LTD+RSA VNN +A ++KH HKH + L+ I
Sbjct: 1706 AVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAIKHNFHKHFIAMCPRLHHMI 1765
Query: 1255 ----------NITVDSF-EKLSLGST-----FGWESVTSFPKALGDIIESLAGAIFVDSG 1298
N++ +F E++ + +T G E PKA+GDI ES+AGAI++DSG
Sbjct: 1766 EKFVCLCTEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSG 1825
Query: 1299 CNREVVFQSIRPLLEPMIT------PETMRFHPVRELTEY-CQKNHFSMKKPVASRISGK 1351
+ ++V++ L++ I P + P+REL E ++ FS + + +GK
Sbjct: 1826 RSLDIVWRVFYNLMKETIDECCSNPPRS----PIRELLEMEPERARFSKLERILE--TGK 1879
Query: 1352 AAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
VTV++Q R T + + AK A K L+ LR+
Sbjct: 1880 VRVTVDIQGKCRF---TGMGRSYRIAKCTAAKRALRYLRS 1916
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + LF T HEG LS + + +SN L
Sbjct: 1412 LLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEVSNCNL 1471
Query: 1041 CKLGCEQKLPGFIRTESFDPK-MWIIP 1066
+LG + LP I FDP W+ P
Sbjct: 1472 YRLGRKHNLPSLIIGSKFDPNDGWLPP 1498
>gi|222625280|gb|EEE59412.1| hypothetical protein OsJ_11562 [Oryza sativa Japonica Group]
Length = 422
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 155/210 (73%), Gaps = 3/210 (1%)
Query: 21 FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-SPFVAVFLVPKVV 79
AR YQLEALE A++ NT+ FLETGSGKTLIA+MLLR+YA+ +R+P S AVFLVP VV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ HTDL V ++ G+MGVDFWD ATW+ ++ EVLVMTPQILLD LR S+F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L I +LI DECHHARG YACI EFYH L + S+ LPRIFGM+AS I SK +
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK-DLN 211
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSN 228
+ +Y ++I ++E LMNSK + S +L++
Sbjct: 212 QHNYSKQISEIENLMNSKCFLLFSYMLLAD 241
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 29/143 (20%)
Query: 500 VKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
V+ GD + + +LASG MR+E L S+ C PL N + + +Y VEST
Sbjct: 250 VEWGDVEAHTNAKKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVEST-------- 301
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAAC 619
P F I+K G CTL+LP + P+QTV +G LK+ C
Sbjct: 302 ---------------------PAFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVC 340
Query: 620 LEACKKLHQIGALTDNLLPDIVV 642
L+AC++LH IGALTD+LLP++ V
Sbjct: 341 LKACQELHAIGALTDSLLPELDV 363
>gi|303314275|ref|XP_003067146.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240106814|gb|EER25001.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1487
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 201/657 (30%), Positives = 318/657 (48%), Gaps = 65/657 (9%)
Query: 2 EPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA- 60
+ +SM + ++ A + R YQLE E A K N I L+TGSGKTLIA++LL+
Sbjct: 79 DELSMSNLLAKQDFASVIHDPREYQLELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIE 138
Query: 61 -----YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKE 115
KP V+ FLV V LV QQA ++ + + +V K+ G M D W+G TW+
Sbjct: 139 QELIDRSAEKPHR-VSFFLVDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWER 197
Query: 116 EMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET 175
++K+ V+V T ++L L ++ K+ I +LI DE H+A+ H YA I+ +FY L+
Sbjct: 198 HLAKNMVIVCTAEVLYQCLLHAFVKMENINLLIFDEAHNAKKDHPYARIVKDFY---LKD 254
Query: 176 GDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA 235
G++ P+IFGMTASP+ +KV D + +LETL+NS++ T ++ S+L + +
Sbjct: 255 GNAKRPKIFGMTASPVDAKV-----DVVKAARNLETLLNSQIATASNLSLLRQSV--ARP 307
Query: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
+ + YD + T L EL R+LE K+ + L
Sbjct: 308 NEEVWSYDRLDQPFETRLYKELRS-RFGDLRALE-----------------KLFTFSLKA 349
Query: 296 LSELGVWLALKAAETISCYESDFFAWEQLDG------FGETIIKKFGSDASQALVTYVPS 349
S LG W A+ + Y + +L+G G I K +A + +
Sbjct: 350 SSNLGAW----CADWVWSYALTEESLPKLEGRAARTAMGNLPIAKIVR--PEAEIQRIRE 403
Query: 350 GAEWSIGDDSKFN---LDSGLLTEKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQS 405
+E I KF + LL+ K+ L LL+Y D +CI+F E+ TA +L
Sbjct: 404 ASE--IIRSHKFGDPAIRPELLSPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCD 461
Query: 406 LLSELLPRHCTWKTKY-IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
L S++ +H + + SG S ++Q V FR+G VN + ATS+ EEGLD+
Sbjct: 462 LFSKIGTKHLRPGVLIGVRSDASGGMNISFRQQVLAVVSFRKGEVNCLFATSVAEEGLDI 521
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
CNL++ FD + T+ +IQSRGRAR NS L++ +Q ++ + S K R
Sbjct: 522 PDCNLIVRFDLASTLTQYIQSRGRARHMNSTTCLIIT---CKSQEIMKRFCISLPKDR-- 576
Query: 525 VLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH 584
+L+ S L Y V++TG T +SS+ ++ + + L + ++
Sbjct: 577 ILN--SNDVDALYEGDRNRKCYTVQTTGAKLTYNSSLVVLAHFANSLQYEKETSTVVSYY 634
Query: 585 --INKEMGICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLL 637
K +C + LP PI+ ++ + K L KQ+A E C L + G L D+ +
Sbjct: 635 HRFTKNAFVCEVVLPEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 691
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 181/409 (44%), Gaps = 68/409 (16%)
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------------ 995
I+ R++S L+A L+ C + ++ I LEA+T D H
Sbjct: 992 IISRIESYLIA-------LEACQELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMG 1044
Query: 996 --LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFI 1053
E LE LGD FLK A S LF +N E VK+ ++ N L K KL FI
Sbjct: 1045 KNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEFI 1104
Query: 1054 RTESFDPKMWIIPGDNSGSYELNDDSLFNGR---KIYVTGRKKVKSKTVADVVEALIGAF 1110
R++SF + W G +L G+ K + + KT+ADV EALIGA
Sbjct: 1105 RSQSFSRRGWYPEGL----------TLLQGKGQSKGATENKHALADKTIADVCEALIGAC 1154
Query: 1111 LSTGGENVGLIFLDRIGIKVDFV---------------------NVPYQRQFQVHAERLV 1149
+N R I V V ++P + V A L
Sbjct: 1155 CLLASKN------HRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSLPKYQTAVVDAAELD 1208
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++ L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+
Sbjct: 1209 LAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYH 1267
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL- 1266
K+P P +LT+ + A V+N +V+ GLH H+ H S L +I V+ E L
Sbjct: 1268 KHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELE 1327
Query: 1267 --GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
S W + PK L D++E+ GAIF+DS + EVV + + L+
Sbjct: 1328 SGDSPDAWTLTSDPPKCLPDMVEAYIGAIFIDSNFSFEVVEEFFQKFLK 1376
>gi|327355811|gb|EGE84668.1| hypothetical protein BDDG_07613 [Ajellomyces dermatitidis ATCC
18188]
Length = 1509
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 199/652 (30%), Positives = 302/652 (46%), Gaps = 81/652 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY-----AYLLRKPSPFVAVFLVPK 77
R YQLE E A NTI L+TGSGKTLIA++LL+ A P ++ FLV
Sbjct: 94 REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 153
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA +K + D + K+ G M D W TW + S++ ++V T ++L L S
Sbjct: 154 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 213
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA I+ +FY L + N P+IFGMTASP+ +KV
Sbjct: 214 FIQMERINLLIFDEAHHAKKDHPYARIIKDFY--LQKIVVQNRPKIFGMTASPVDAKV-- 269
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLAD 255
D + LE L++S++ T ++ + L IP + Y + P LY +
Sbjct: 270 ---DVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDRLDDPSETELYKSMQS 326
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-------LALKAA 308
I +++ KI S L S LG W AL A
Sbjct: 327 RFGRI----------------------RELEKIFSFALEASSTLGRWCSDWLWTFALDEA 364
Query: 309 E------TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
E IS + QL G E I D + + S A ++ D ++
Sbjct: 365 ELPKLEGKISKSYMQSRSGNQLKGADEAI------DLLREAAQLIKSHAFYTPVDCTEH- 417
Query: 363 LDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY 421
L+ K+ L L + + D +CI+F+++ TA +L L S + +H +T
Sbjct: 418 -----LSSKVRLLSHELSMYFERHTDTKCIVFIQQRYTARLLAELFSRIGTQHM--RTGV 470
Query: 422 IAG-NNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ G + GI S ++Q + +FR+G +N + ATS+ EEGLD+ CNLVI FD + T
Sbjct: 471 LIGVRHDGIGGANFSFRQQFLTLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNST 530
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSP- 535
+ ++QSRGRAR +S Y MV+ + S +E + N MR+ E L +
Sbjct: 531 MIQYVQSRGRARHSHSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSS 590
Query: 536 ------LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
L+N Y F + STG T SS++++ Y S L + + I +
Sbjct: 591 DDLGMILDNERYRNSFT-IHSTGAKLTYESSLAVLAHYASSLQYENDMSAQVNYFIERID 649
Query: 590 G--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLL 637
G +C LP P + + + + + L KQ+A E C L + G L D+ +
Sbjct: 650 GAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGLLDDHFV 701
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 209/456 (45%), Gaps = 60/456 (13%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C ++P+ + +N L R+ +Q++ ++ + PE RI + +
Sbjct: 947 CDWKQPVFRAELVRLRRNLLD--RETEQEKGEGTTYYICPEPLRI--SALPAPVAAFAFA 1002
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH---------- 995
P+I+ RL+S L+++ +ML ++ I T LEA+T + H
Sbjct: 1003 FPAIISRLESYLISLEACDML------HINIKTHLALEALTKDSDNTEEHRGEQIHFQRG 1056
Query: 996 ----LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGD FLK A S LF +N E VK+ +I N L KL
Sbjct: 1057 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYE 1116
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR-KIYVTGRKKVKSKTVADVVEALIGAF 1110
FIRT+ F + W G L G+ K + + KT+AD+ EALIGA
Sbjct: 1117 FIRTQGFSRRNWYPEGIK----------LLQGKAKSESQNKHSLGDKTIADICEALIGAS 1166
Query: 1111 LSTGGENVGLIFLDRIGIKVDFVN-----------------VPYQRQFQVHAERLVNVRH 1153
L +GG+ F + FVN +P + Q A +L +
Sbjct: 1167 LLSGGK--AHRFDSAVKAVTTFVNSDDHRASEWNCYVNLYSLPDYQIAQADAGQLDLAKQ 1224
Query: 1154 LESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
+ L Y FR P LL A TH S+ +P CYQRLEFLGD++LD + YLY++YP
Sbjct: 1225 IGDRLGYQFRYPRLLRSAFTHASFPSAWSRVP-CYQRLEFLGDSLLDMVCVEYLYHRYPD 1283
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF---EKLSLGS 1268
P +LT+ + A V+N +VK GLH+H+++ S+ L +I V+ E S S
Sbjct: 1284 RDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNNS 1343
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
W + + PK L D++E+ GAIFVDS EVV
Sbjct: 1344 PDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFKFEVV 1379
>gi|327259080|ref|XP_003214366.1| PREDICTED: endoribonuclease Dicer-like isoform 2 [Anolis
carolinensis]
Length = 1915
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 328/717 (45%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L++ +Y +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNG 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV LV QQ ++ H+DLKVG+Y + W W +E K++VLVMT Q
Sbjct: 84 KRTVFLVNSANLVAQQVSTVRTHSDLKVGEYSSLEITETWTKERWNQEFDKYQVLVMTCQ 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ + L+ I +LI DECH A H Y IM +L E+ S PRI G+TA
Sbjct: 144 VALNILKREHLSLSNINLLIFDECHLAIQDHPYRAIM-----KLCESCPS-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K SE + +KI LE ++ S T VL + T++ D P+
Sbjct: 198 SILNGKCDPSELE--EKIQKLEKILKSSAETATDLVVLDRY----TSQPCEIVVDCGPYT 251
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKV-SKINSTLLYCLSELGV 301
+ L + L + EL S N D N E + LI K++ S + LL LG
Sbjct: 252 DKSGLYERL-LTELDDALSFLN-DCNISVHCRERDSTLISKQILSDCRAVLLV----LGP 305
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T ++K + +
Sbjct: 306 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------ 353
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 ---SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE 410
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 411 DEEIEEKEKTETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 470
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 471 GHGIGKNQPRSKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 530
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ S D T +E L NK K V ++
Sbjct: 531 TEYRSYVQSKGRARAPISNYIMLADSDKIKHFEEDLKTYKAIEKILR--NKCSKSVDNNE 588
Query: 530 SLPCSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---H 584
+ P+ ++ ++ E G T+++++ I YC+RLPSD + PK
Sbjct: 589 T-ESEPIIDDDDIFPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRE 647
Query: 585 INKEMGICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I G + ++ L C+KLH+IG L D+L+P
Sbjct: 648 LPDNTFYSTLYLPINSPLRVSIVGPPMGCTRLAERVVALICCEKLHKIGELDDHLMP 704
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 175/374 (46%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1547 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKIDWDSALYSHTEHFNSQ 1606
Query: 1131 ----------------------DFV----NVPYQRQF-QVHAERLVN-----VRHLESLL 1158
D V +P + F AER +N + E +
Sbjct: 1607 QKHSSANCISVSLSNQESSRYKDLVYGCLKIPPRCMFDHPDAERTLNHLISGFENFEKKI 1666
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1667 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1726
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1727 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1782
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+ P++ P+I +
Sbjct: 1783 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANV 1842
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1843 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1896
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1897 AARRALRSLKANQP 1910
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1292 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1351
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1352 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1379
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1288 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1340
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1341 MRSKKVSN 1348
>gi|167234451|ref|NP_001107840.1| Dicer-2 [Tribolium castaneum]
gi|270002830|gb|EEZ99277.1| hypothetical protein TcasGA2_TC001108 [Tribolium castaneum]
Length = 1623
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 266/1020 (26%), Positives = 452/1020 (44%), Gaps = 133/1020 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
RNYQ+ +E A+++NTI++L TGSGKT IAIM+L+ + +P ++V LV V
Sbjct: 10 RNYQVNLMEIAIRENTIIYLPTGSGKTFIAIMVLKQLCAPILRPYSDGGKISVILVNSVA 69
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV Q + ++ H VG Y G+M VDFW A W+++ +K++V++MT QI+++ + +
Sbjct: 70 LVDQHGKYVRDHATFSVGTYTGEMNVDFWSEAEWEQQFNKYQVVIMTSQIMVNLINNRFI 129
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L + ++I DECHH IM F+ ++ PR+ G+TA+ + S+
Sbjct: 130 DLGKVNLMIFDECHHGVEDQPMRQIMKHFH------SCTDKPRVLGLTATLLNGNCKLSK 183
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL---------- 249
+I LE +SKV T V+ + +ST + +K + P AL
Sbjct: 184 --VMDEIRSLEVTFHSKVATVEGLDVV---VGYSTNPQELFKVCQ-PGALSLDAKQVLNN 237
Query: 250 YTHLADELAMIELKHTRSLENLDLNEAQAEL----IRKKVSKINSTLLYCLSELGVWLAL 305
L ++L I +K ++ NL +E L + K + + S L+ + LG +
Sbjct: 238 LRQLINDLEHINIKDEQNSVNLLQSETLKPLEPSDVLKSLRNLISDLMIHIEMLGAFGGH 297
Query: 306 KAA-------ETIS--CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A E I C F + + TI+ + + Y P +
Sbjct: 298 IACVAHMIQIERIKKHCQNHQLFI---VLNYVMTIMGTTKLLLEETMAGYEP------LE 348
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLL---SELL 411
KF+ D K++ + E L EY + E++ C++F +R TA VL ++ S++
Sbjct: 349 KIRKFSSD------KVLKVFEILDEYKTKSDEELCCLVFTKRRFTAKVLHHIIDKASQVD 402
Query: 412 PRHCTWKTKYIAGNNSGIQCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
P+ K+ ++ GN + +R KK E++ F +NV+V++++LEEG+D+
Sbjct: 403 PKFYHIKSNFVVGNKNNPYNDTRENLYITKKNREVLNSFVSKEINVLVSSNVLEEGVDIP 462
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
C LVI FD S S+IQS+GRAR S Y +V++ D + + + ++
Sbjct: 463 KCTLVIKFDKSEDYRSYIQSKGRARHIKSLYYTIVETTDVAKYDKKYSAFKEIENLVNDL 522
Query: 526 L----SHASLPCSPLNNHMYGED----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
L S P +MY ED +Y ++S+V+L+ YCS L SD Y
Sbjct: 523 LIGKNSERDHPNLSEIRNMYNEDKLEPYYVNGPNSAQVNMTSAVALLCRYCSNLASDKYT 582
Query: 578 KPTPKFHINKEMGICTL----YLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIG 630
P+++ ++ L +LP CP+ I N K K+AA L AC KLHQ G
Sbjct: 583 TYAPEWYYEEDSSSAKLRVVIFLPVVCPLIDPIVGPYMHNKKDAKRAAALVACIKLHQCG 642
Query: 631 ALTDNLLP--------DI-VVEKHDAQKR----GNEPYNAEHPIYFPPELVNQSPQDTKI 677
L +NLLP D+ + H Q++ GN+ H P + + D +
Sbjct: 643 ELDNNLLPWKKQLDEADVSYLFTHWPQEKESDAGNKKKKRLHDKEIAPSVKSAIQPDRVL 702
Query: 678 TYHCYLIELKQHFNYDI-SARNIVLAMRTELESEIKK-------VNFDLEVERGRLTVNL 729
H I + + D+ +A I +T L+ + F L G L + +
Sbjct: 703 YLHTININPQYKRSDDLKNAVTIYDLYKTPLKFGLLSPKPLPDLCKFPLFDSNGTLEIEI 762
Query: 730 KHLGR-IQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID---YLLLP 785
++ R ++ N++ R F +F + L EIL F + DN ++ L++P
Sbjct: 763 RNNVREVEFAANEMKEMREFHFLVF--------NDLLEILKEFLIFDNTGMNSEMLLVVP 814
Query: 786 STGQ----LIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCT 841
+ +D++ + RDN + N RI + KI + +
Sbjct: 815 VQDRCGDVCVDFRVI------RDNKNLKN-KLEPAATERINLNVTEETYLHKIVSPWYRS 867
Query: 842 PHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLL----NGRR 897
P ++Y +T V +A S F N + +Y E++ + + +PLL R
Sbjct: 868 P--PKMYVVTKVCPDKSALSRFP--NHEYPNFVSYYSEKHSLSILDPSQPLLLVKGLSER 923
Query: 898 IFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
+ + + +++K+K ++ L PEL +I + F+PSI+ RL LL
Sbjct: 924 LNAFKPRGAGGKRKKEKMYEELEEYLIPEL--VIKQEFPSCLWIQARFLPSILSRLAYLL 981
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 224/502 (44%), Gaps = 87/502 (17%)
Query: 966 LLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
+LD N + ++ +A+T + + +LE LETLGDSFLK+ AS + + +EG
Sbjct: 1131 ILDVQFDNQSPNLCQIYQALTAAEANDIVNLERLETLGDSFLKFVASLYIIFKFPTYNEG 1190
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIP--------GDNSGSYELND 1077
+ K +++SN L LG + L G ++ P W+ P G+ E +
Sbjct: 1191 KSTTLKGKLVSNKNLYYLGVRKNLGGILKNSDLSPSDWVPPCFCIPQTISKAIGNKEYSV 1250
Query: 1078 DSLFN----------------------------------GRKIYVTGRKKVKSKTVADVV 1103
SLFN G ++ V K++AD V
Sbjct: 1251 VSLFNCCISPEEQVSGNLNRKTLSDMTTEEIAPDEENSYGNMCNFLNKQYVGDKSIADSV 1310
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAE----------------- 1146
EAL+GA+ +GG G+ F++ IGI +P Q Q E
Sbjct: 1311 EALLGAYFLSGGIQGGIKFMEWIGI------LPLSEQIQRLIETTQVDPVLNKKSTKTDV 1364
Query: 1147 --RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
+ R +E L Y+F + + L++ALTH SY I Y+RLEFLGDAVLD+LIT Y
Sbjct: 1365 DFHMPQWREIEQRLGYTFTNRAFLLQALTHSSYSPNRITLSYERLEFLGDAVLDFLITCY 1424
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF--- 1261
++ L PG +TD+RS+ VNN+ +A V+ G HK +L + L I+ D
Sbjct: 1425 IFEHCGHLEPGQVTDLRSSLVNNNTFASLVVRCGFHKFLLMMNSNLQGHIDKFADYLASK 1484
Query: 1262 ------EKLSL--GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL- 1312
E L L PK LGDI E+LAGAI++DS + + V++ ++
Sbjct: 1485 NYVIDDEVLILLEEDEMNIAEYVDVPKVLGDIFEALAGAIYLDSNKDLKTVWRVFYKIIW 1544
Query: 1313 -EPMITPETMRFHPVRELTEYCQKNH---FSMKKPVASRISGKAAVTVEVQANGRLFEHT 1368
E + + + + +R L E C + FS V ++ K V+++ GR
Sbjct: 1545 REIDLFSKNVPKNVIRRLYE-CHTVYPPQFSKALEVGNQ---KTMVSLDFMCEGRKKRVH 1600
Query: 1369 FLDADKKTAKKVACKEVLKSLR 1390
+K AK+ A K L++L+
Sbjct: 1601 GFGTNKILAKRAAAKIALRALK 1622
>gi|320037410|gb|EFW19347.1| hypothetical protein CPSG_03731 [Coccidioides posadasii str.
Silveira]
Length = 1465
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 317/660 (48%), Gaps = 63/660 (9%)
Query: 2 EPVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY 61
+ +SM + ++ A + R YQLE E A K N I L+TGSGKTLIA++LL+
Sbjct: 79 DELSMSNLLAKQDFASVIHDPREYQLELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIE 138
Query: 62 LLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
V V LV QQA ++ + + +V K+ G M D W+G TW+ ++K+
Sbjct: 139 QELIDRSAEKPHRVDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNM 198
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
V+V T ++L L ++ K+ I +LI DE H+A+ H YA I+ +FY L+ G++ P
Sbjct: 199 VIVCTAEVLYQCLLHAFVKMENINLLIFDEAHNAKKDHPYARIVKDFY---LKDGNAKRP 255
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
+IFGMTASP+ +KV D + +LETL+NS++ T ++ S+L + + + +
Sbjct: 256 KIFGMTASPVDAKV-----DVVKAARNLETLLNSQIATASNLSLLRQSV--ARPNEEVWS 308
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGV 301
YD + T L EL R+LE K+ + L S LG
Sbjct: 309 YDRLDQPFETRLYKELRS-RFGDLRALE-----------------KLFTFSLKASSNLGA 350
Query: 302 WLALKAAETISCYESDFFAWEQLDG------FGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A+ + Y + +L+G G I K +A + + +E I
Sbjct: 351 W----CADWVWSYALTEESLPKLEGRAARTAMGNLPIAKIVR--PEAEIQRIREASE--I 402
Query: 356 GDDSKFN---LDSGLLTEKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELL 411
KF + LL+ K+ L LL+Y D +CI+F E+ TA +L L S++
Sbjct: 403 IRSHKFGDPAIRPELLSPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSKIG 462
Query: 412 PRHCTWKTKY-IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+H + + SG S ++Q V FR+G VN + ATS+ EEGLD+ CNL+
Sbjct: 463 TKHLRPGVLIGVRSDASGGMNISFRQQVLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLI 522
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS 530
+ FD + T+ +IQSRGRAR NS + +V+ D+ N+L S ++ K S
Sbjct: 523 VRFDLASTLTQYIQSRGRARHMNSTFAHLVER-DNFVHRESVNHLQSSEEIMKRFC--IS 579
Query: 531 LPCSPLNNH-----MYGED----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
LP + N +Y D Y V++TG T +SS+ ++ + + L +
Sbjct: 580 LPKDRILNSNDVDALYEGDRNRKSYTVQTTGAKLTYNSSLVVLAHFANSLQYEKETSTVV 639
Query: 582 KFH--INKEMGICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLL 637
++ K +C + LP PI+ ++ + K L KQ+A E C L + G L D+ +
Sbjct: 640 SYYHRFTKNAFVCEVVLPEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 699
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 158/346 (45%), Gaps = 46/346 (13%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E LE LGD FLK A S LF +N E VK+ ++ N L K KL FIR++
Sbjct: 1026 ERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEFIRSQ 1085
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGR---KIYVTGRKKVKSKTVADVVEALIGAFLST 1113
SF + W G +L G+ K + + KT+ADV EALIGA
Sbjct: 1086 SFSRRGWYPEGL----------TLLQGKGQSKGATENKHALADKTIADVCEALIGACCLL 1135
Query: 1114 GGENVGLIFLDRIGIKVDFV---------------------NVPYQRQFQVHAERLVNVR 1152
+N R I V V ++P + V A L
Sbjct: 1136 ASKN------HRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSLPKYQTAVVDAAELDLAA 1189
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
++ L Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+K+P
Sbjct: 1190 QVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYHKHP 1248
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL---G 1267
P +LT+ + A V+N +V+ GLH H+ H S L +I V+ E L
Sbjct: 1249 DKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGD 1308
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
S W + PK L D++E+ GAIF+DS + EVV + + L+
Sbjct: 1309 SPDAWTLTSDPPKCLPDMVEAYIGAIFIDSNFSFEVVEEFFQKFLK 1354
>gi|327259078|ref|XP_003214365.1| PREDICTED: endoribonuclease Dicer-like isoform 1 [Anolis
carolinensis]
Length = 1918
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 328/717 (45%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L++ +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV LV QQ ++ H+DLKVG+Y + W W +E K++VLVMT Q
Sbjct: 94 KRTVFLVNSANLVAQQVSTVRTHSDLKVGEYSSLEITETWTKERWNQEFDKYQVLVMTCQ 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ + L+ I +LI DECH A H Y IM +L E+ S PRI G+TA
Sbjct: 154 VALNILKREHLSLSNINLLIFDECHLAIQDHPYRAIM-----KLCESCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K SE + +KI LE ++ S T VL + T++ D P+
Sbjct: 208 SILNGKCDPSELE--EKIQKLEKILKSSAETATDLVVLDRY----TSQPCEIVVDCGPYT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKV-SKINSTLLYCLSELGV 301
+ L + L + EL S N D N E + LI K++ S + LL LG
Sbjct: 262 DKSGLYERL-LTELDDALSFLN-DCNISVHCRERDSTLISKQILSDCRAVLLV----LGP 315
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T ++K + +
Sbjct: 316 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------ 363
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 ---SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE 420
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 421 DEEIEEKEKTETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 480
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 481 GHGIGKNQPRSKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ S D T +E L NK K V ++
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADSDKIKHFEEDLKTYKAIEKILR--NKCSKSVDNNE 598
Query: 530 SLPCSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---H 584
+ P+ ++ ++ E G T+++++ I YC+RLPSD + PK
Sbjct: 599 T-ESEPIIDDDDIFPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRE 657
Query: 585 INKEMGICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I G + ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDNTFYSTLYLPINSPLRVSIVGPPMGCTRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 175/374 (46%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKIDWDSALYSHTEHFNSQ 1609
Query: 1131 ----------------------DFV----NVPYQRQF-QVHAERLVN-----VRHLESLL 1158
D V +P + F AER +N + E +
Sbjct: 1610 QKHSSANCISVSLSNQESSRYKDLVYGCLKIPPRCMFDHPDAERTLNHLISGFENFEKKI 1669
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1670 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1729
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1730 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1785
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+ P++ P+I +
Sbjct: 1786 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANV 1845
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1846 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1899
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1900 AARRALRSLKANQP 1913
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1291 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1343
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1344 MRSKKVSN 1351
>gi|379987680|gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
Length = 596
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 222/427 (51%), Gaps = 36/427 (8%)
Query: 989 KCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQK 1048
+C E F +E LE LGDS LKYA S LF Y HEG LS ++ +SN+ L K+G +
Sbjct: 3 RCNESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSDQRSWAVSNSTLHKVGTSRH 62
Query: 1049 LPGFIRTESFDPKMWIIPGD------------NSGSYELNDDSLFNGRKIYVT-----GR 1091
L G+IR +FDP+ W PG + L+ L K+ V G
Sbjct: 63 LQGYIRDGAFDPRRWTAPGQLSLRLCPCDHGVETSEVPLDKKFLTEDPKVVVGKHCDRGH 122
Query: 1092 KKVKSKTV-ADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------DFVNVPYQRQFQ 1142
+ + SKT+ +D VEALIGA+ GG L + +G++ D + + +
Sbjct: 123 RWMGSKTIISDCVEALIGAYYVGGGFIAALKLMKWLGVEAELEPSLVEDAIKTAFLYSYT 182
Query: 1143 VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
A+ ++ LE L+Y F LL+EA+TH + + ++ YQRLEFLGD+VLD LIT
Sbjct: 183 PKAK---DIEDLELKLSYKFSVKGLLLEAITHATVLEVDVSYNYQRLEFLGDSVLDILIT 239
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE 1262
YLY K+ + PG LTD+RSASVNND +A ++VK LH H+ H S L I+ +F
Sbjct: 240 WYLYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHHSGYLESEIS----AFV 295
Query: 1263 KLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
KL S PK LGD++ES+AGAI VD+ N + V++ ++PLL P++TP+ +
Sbjct: 296 KLVSDSCS--LQGNKAPKVLGDLVESIAGAILVDTKLNLDEVWKIVKPLLSPIVTPDKLE 353
Query: 1323 FHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
P+REL E C + +K + + +Q L +K AK A
Sbjct: 354 LPPLRELIELCDSLGYFLKDHCMVK-GDTVHAELRLQLKDELLVAEGCGQTRKNAKGQAA 412
Query: 1383 KEVLKSL 1389
++LK L
Sbjct: 413 LKLLKDL 419
>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
Length = 1402
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 202/660 (30%), Positives = 310/660 (46%), Gaps = 117/660 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--------SPFVAVFL 74
R YQLE E A +NTI L+TGSGKTLIA +L+R +++ K P V+ FL
Sbjct: 18 REYQLELFEIAKTRNTIAVLDTGSGKTLIACLLIR---HIIEKELESRAAGNHPRVSFFL 74
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V V LV QQA ++ + D K+G+Y GDMGV W TW + + +V+VMT IL L
Sbjct: 75 VHNVTLVFQQAAVLRCNIDAKIGEYCGDMGVGDWRKETWNDILKGQQVIVMTADILYSCL 134
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
++ K+ I +L DE HHA+ +H +A I+ +FY L ++ P+IFGMTASP+ +
Sbjct: 135 THAFIKMKDINLLCFDEAHHAKKRHSFARIIQDFY---LPEPENTRPKIFGMTASPVGGR 191
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI--------PFSTAKFKFYKYDEIP 246
D Q DLE L++S++ T + ++L I + + + + + E+
Sbjct: 192 -----SDVVQAAVDLEKLLHSRIATTSDLALLQGSISRPEEVVTAYPKLRPQIFAFAELA 246
Query: 247 HA-LYTHLADELAMIELKHTRSLENLDLNE----AQAELIRKKVSKINSTLLYCLSELGV 301
+ L AD + L T++ + + E AQAE+ + +++I L Y
Sbjct: 247 SSELGPWCADVMWKFALSETQARKFERMTERRLDAQAEI--ESIARIEKELSY------- 297
Query: 302 WLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
L+ A I C K+ A
Sbjct: 298 ---LQEAADIVC--------------------KYNIPPPSA------------------- 315
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVEDI-RCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
DS L+ K++ L L E V+ +CIIFV R TA VL L L K K
Sbjct: 316 --DSSHLSPKVLLLHAYLKEIYSVQTTDKCIIFVSRRYTATVLGELFKWL-------KIK 366
Query: 421 YIA-----GNNSGIQCQ----SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
Y+ G+ +G + + ++Q V +FR+G +N ++ATS+ EEGLD+ C+LVI
Sbjct: 367 YLQIGVLLGSLTGSRVPGTNFTLREQMITVSKFRQGKLNCLIATSVAEEGLDIPDCSLVI 426
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMR--------K 523
FD RT+ ++QSRGRAR S Y+ M++SG+ + L + S MR
Sbjct: 427 RFDLYRTMIQYVQSRGRARSSVSKYIHMLESGNRSHLEMLSDVRNSEKIMRDFCRSLPAD 486
Query: 524 EVLSHASLPCSPLNNHMYGEDFYHVE-STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+L S S + + G YH+E TG T++SS+ +++ Y LP + P
Sbjct: 487 RILDSTSPDESSVLENTEGP--YHIEPGTGAKLTMNSSMLILFHYTQLLPQEDNELLQPL 544
Query: 583 FHINK--EMGICTLYLPNNCPIQTV--IAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
F + + E I + LP P+Q + + KQ+A C +L + G L +NL+P
Sbjct: 545 FTVRRVSEGFISEVTLPTLSPVQHIEGAPMPTKRAAKQSASFFTCLELRRKGELDENLMP 604
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 219/493 (44%), Gaps = 81/493 (16%)
Query: 890 EPLLNGRRIFHVQNYLSK-------CRQQKQKEPSKISFE-LPPELCRIIMAPISLSTFY 941
EP+L + H NYLS + PS S +P ++ + M
Sbjct: 850 EPVLIAECLLHRINYLSAPDSKWVTADNRAVITPSAFSISAIPSQVIHMAM--------- 900
Query: 942 SFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH------ 995
PS + R+ S L A + ++L + I LEAIT K E+ H
Sbjct: 901 ---IFPSFITRIDSYLHAWEVCSLL------GMEIDVGVALEAIT--KDSENTHEHGSAQ 949
Query: 996 ----------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGC 1045
E LE LGD FLK A S L+ Y + E L VK+ +I N L
Sbjct: 950 VSLQRGMGSNYERLEFLGDCFLKLATSLSLYTAYHADDECELHVKRMVLICNRYLFTKAK 1009
Query: 1046 EQKLPGFIRTESFD-----PKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
E K+P +I+T F PKM ++ G + + N K ++ R + K+++
Sbjct: 1010 EMKIPEYIQTAGFSRRTWYPKMKLLMGKGTTQH--------NSSKEEISHR--LADKSIS 1059
Query: 1101 DVVEALIGAFLSTGGENVGLIFLDRI--------GIKVDFVNVPYQRQFQVHAERLVNVR 1152
DV EALIGA L G + + I + D+ N + +Q+ ++R
Sbjct: 1060 DVCEALIGAALIDKGLDGATQIVTAILRTPEHSQKVWADYYNCYTKPAYQLQEPSPSHIR 1119
Query: 1153 ---HLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
+E L+ Y F+ P LL+ ALTH S + +P YQRLEFLGDAVLD + Y++
Sbjct: 1120 VAEDIEELVGYKFKHPRLLISALTHPSLPFTWDRVP-SYQRLEFLGDAVLDLVCVRYMFQ 1178
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL---YKRINITVDSFEKL 1264
KYP P +LT+ + A V+N + +V+ G H+ + L + + + +
Sbjct: 1179 KYPHADPQWLTEHKMAMVSNKFLGMVAVEMGFHRKLRRMGSVLDHAIREYEVDIQDAKAN 1238
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM--R 1322
S G+ W S+ + PKAL D++E+ GA+FVDSG +V + + + P T+
Sbjct: 1239 SNGAVDFWTSLKAPPKALPDVLEAFIGAVFVDSGFQYNIVERLVNTFILPYFVDMTVFDN 1298
Query: 1323 F---HPVRELTEY 1332
F HP +T++
Sbjct: 1299 FAGQHPTTYITKF 1311
>gi|452003006|gb|EMD95463.1| hypothetical protein COCHEDRAFT_1026333 [Cochliobolus
heterostrophus C5]
Length = 1592
Score = 236 bits (602), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 195/669 (29%), Positives = 311/669 (46%), Gaps = 95/669 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQ E + A +N I L+TGSGKT IA +LLR + R P +A FLV
Sbjct: 118 RDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVLDMELDHRARGGIPRMAFFLVDS 177
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA ++ D V G MG W +TW+ K+ ++V T ++L+ + S
Sbjct: 178 VNLVFQQANVLRCGLDQNVEGICGSMGASLWSKSTWQSYFDKNMIIVCTAEVLVQCMMHS 237
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA +M ++Y L E S PRIFGMTASP+ +K S
Sbjct: 238 FMTMSQINLLIFDEAHHAKSNHPYARLMKDYY--LQEIDVSQRPRIFGMTASPVDTKGLS 295
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
++ + +LE L++SK+ T A ++ SN I + A+Y L +E
Sbjct: 296 ADH-IKEAARNLEKLLHSKIATTAESTLASNSISRPDEEV----------AMYPRLQEEY 344
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS------ELGVWLALKAAETI 311
+ IR + I + Y L+ ELG W +
Sbjct: 345 ET----------------PLHQKIRARFGDIRAFDKYFLASKRHGRELGRWAS------- 381
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDAS------QALVTYVPSGAEWSIGDDSKFNLDS 365
Y S F EQ + K + A V + AE+ +FN +
Sbjct: 382 DMYWSFVFTDEQSRKLEQRERLKHSKNRPDEVKEWDAKVKRLQEAAEFV----QQFNFGA 437
Query: 366 GLLTEK-IVCLIESL-----LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
L+++ + ++ L L Y ++ RCI+FVE+ TA +LQ + S++ H +
Sbjct: 438 CTLSDQDLSSKVQKLYYWLNLYYERSDEARCIVFVEQRQTARLLQLIFSQIGGPHL--RC 495
Query: 420 KYIAGNNSGIQCQSRKKQNEI--VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G N+ Q+ +N+I V +FRRG +N + ATS+ EEGLD+ CNLV+ FD R
Sbjct: 496 SVLVGINTSEHEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYR 555
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK-----------EVL 526
T+ +++QSRGRAR +NS YL M++ G+ + R+ + MR+ +
Sbjct: 556 TMIAYVQSRGRARHRNSKYLHMIEEGNHDHRERVMDVKLDEQVMRRFCRELPQDRHIDEY 615
Query: 527 SHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS---DGYFKPT--- 580
+ S+ + +Y + G + SS++++ + + LP +PT
Sbjct: 616 DNDSMDLLTFEDQLYPS---FITKLGAKLSFRSSLAILNHFVATLPGPDRQTMLQPTYVV 672
Query: 581 -PKFHIN-----KEMGICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGAL 632
P + + + + + LP + PI T+I Q K +A +AC +L++ G L
Sbjct: 673 CPDLNYDGLDAQRRGFVSEVILPEHSPINTIIGDVQSKKAIAKCSAAYKACLELYKKGYL 732
Query: 633 TDNLLPDIV 641
DNLLP +
Sbjct: 733 DDNLLPTTI 741
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 210/504 (41%), Gaps = 98/504 (19%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRI--IMAPISLSTFYSFTFVP 947
+P+L RI +N L+ +++ + S + + PE I + P + + +P
Sbjct: 984 QPVLQAERIPLRRNQLAHIEDKEKGDFSNLKIYICPEPFHISNLATPFVVMCY----VLP 1039
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLE---------- 997
+I+HR +S L+A+ ++L + + LEA+T + H E
Sbjct: 1040 AIIHRFESYLIALEACSVL------ELKVNPALALEALTKDSENSEEHDEEKINFKSGMG 1093
Query: 998 ---------------------SLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
SLE LGD FLK A S +F + +E V++ ++
Sbjct: 1094 PNYERYGYELRMNGFKLTLGLSLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLC 1153
Query: 1037 NAALCKL-----------GCEQKLP--GFIRTESFDPKMWIIPG----DNSGSYELNDDS 1079
N L + G E+ L +IRTESF + W G G+ + DD
Sbjct: 1154 NKNLMETAVGNKKVVSPEGTEKDLQLYKYIRTESFSRRTWYPEGLRLLKGKGANKSQDD- 1212
Query: 1080 LFNGRKIYVTGRKKVKSKTVADVVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP 1136
++ + K++ADV EA IGA L TG + + + F N P
Sbjct: 1213 -------WLKLTHNLGDKSIADVCEAFIGATLQEHYTGDRWRPNDWDEAVKAVKLFANSP 1265
Query: 1137 -------------YQR-QFQ---VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 1177
YQ+ ++Q A L R +E Y F+ P LL A H SY
Sbjct: 1266 DHTMSKWSDYYEAYQKPKYQTAEASAAMLDMARKIEMKHPYHFKYPRLLRSAFAHPSYPY 1325
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
M IP YQRLEF GDA+LD +LY KYP P +LT+ ++ V+N VK
Sbjct: 1326 MYENIPN-YQRLEFAGDALLDMAFITHLYFKYPDKDPHWLTEHKTPMVSNKFLGAVCVKL 1384
Query: 1238 GLHKHILHASHELYKRIN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIF 1294
G H +I + L +I + + E+ + G+ W +++ PK L D+IE+ +IF
Sbjct: 1385 GWHVYIKQNTATLTNQIRDYVLEAEEAEREAGGAVDYWVTISEPPKCLADVIEAYVASIF 1444
Query: 1295 VDSGCNREVVFQSIRPLLEPMITP 1318
VD+ E F ++ E + P
Sbjct: 1445 VDA----EFDFGVVQTFFEMHLKP 1464
>gi|328772805|gb|EGF82843.1| hypothetical protein BATDEDRAFT_23044 [Batrachochytrium dendrobatidis
JAM81]
Length = 1492
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 273/1053 (25%), Positives = 458/1053 (43%), Gaps = 175/1053 (16%)
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN- 426
++ K+ CLI+ LLE+R +E I+FV++ A V++ L+ P K K + G+
Sbjct: 410 VSPKVQCLIDILLEFRYIESFCGIVFVQQRSYASVIRMLIIAH-PDLQFLKPKLLIGHGK 468
Query: 427 -----SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
G+ S Q +V FR G N+++AT + EEGLD++ FD ++T+ S
Sbjct: 469 RKRAVGGLNGMSSTTQQSVVTAFRCGDCNLLIATQVAEEGLDIR-------FDKTQTLIS 521
Query: 482 FIQSRGRARMQNSDYLLMVKSGDST----------TQSRLENYLASGNKMRKEVLSHASL 531
+IQSRGRAR S ++++V D ++ L++ L + E +S S
Sbjct: 522 YIQSRGRARQNCSQFIVLVNKDDQQEEQSLHAIQQKEAHLQSLLVQSVNEKPEAVS--SF 579
Query: 532 PCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY-FKPTPKFHINKEMG 590
C ++ + Y++ TG + L +S+ + YC+ L +G +P I+ +
Sbjct: 580 TCDSDDSDKFQ---YNIAHTGAVLNLYNSIKFLQEYCATLSVNGTDSQPVYTTSIDGDFN 636
Query: 591 I-CTLYLPNNCPIQTVIAQGN----IKTLKQAACLEACKKLHQIGALTDNL--------L 637
+ T+ +P+ + QG+ IK K+ A E K LH+ + D+
Sbjct: 637 MYVTIQMPHLVRKECQGIQGSSANTIKKAKRLAAFEMVKLLHKFQEVDDHFNSCLSKTKY 696
Query: 638 PDIVVEKHDAQKRGNEPYNAEHPIYFPPEL-------------------VNQSPQDTK-I 677
V + + K+ ++P+ P L ++ + DT +
Sbjct: 697 GAFVAKSKETSKKAKLIDMCDYPLKIPTALQGTWKDGEHAWVHIVHLQQIDSANSDTTGL 756
Query: 678 TYHCYLI---ELKQHFNYDISARNIVLAMRT----ELESEIKKVNFDLEVERGRLTVNLK 730
C+ EL + +I ++ + T +++E +NFD E R R+ V L
Sbjct: 757 LNTCFKPASDELHETKPVEIKTTTLLFCILTCGVENVQTEHMDLNFDGEPRRFRV-VALA 815
Query: 731 HLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDK-LNEILDGFELR----DNLEIDY-LLL 784
H ++ L + + + LF ++ K L+ L +R DN ID +L
Sbjct: 816 H--KLLLTSDMIAQFFEYHFYLFSGVLRSQFKKGLDWSLLCVPIRSEYADNTAIDISTIL 873
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP-- 842
P + +IDW ++ C T+ + + P + +++ ++
Sbjct: 874 PES--IIDWDSLRY--------------CQTVDQTDLSSITNDPTISRSVYHDMIVFDRV 917
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQ 902
H + Y I + +SL + N + +T K Y+ R REP++ + + +
Sbjct: 918 HYSRKYSILEIQHDKTPSSLVSDLN-TFSTVKSFYKTRLRC-----REPIVEDQCLIYAT 971
Query: 903 NYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA--- 959
+ Q K+K + + + P+ C I P+ Y ++P ++ +L LLA
Sbjct: 972 K-VPDPVQIKKKCIASVKTYVLPQFCTIY--PVKRLHLYQGLYMPLVIRQLWHRLLATDL 1028
Query: 960 -----VNLKNMLLDHCMQN-VTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAAS 1012
++L N + DH Q + I T++ VL A +T + E LE LGDSFLK S
Sbjct: 1029 YFGKEISLLNRMADHTPQFFINIETLQTVLVASSTDL---PYSYERLEILGDSFLKIHQS 1085
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
LF + EG L+ + N LC+ E L G I T F K W+ P S
Sbjct: 1086 LHLFALNPSQDEGWLTTSRMVAEQNLELCRRATEVGLQGLILTTRFSRKQWVPPAKGHDS 1145
Query: 1073 YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 1132
+ + K +ADV EA+IG L GG VG R + D+
Sbjct: 1146 MQ------------------SMPKKILADVTEAIIGGCLIDGG-IVGASEAVRSLLNRDY 1186
Query: 1133 VNVP--YQRQFQVH--------------AERLVNVRHLESLLNYSFRDPSLLVEALTHGS 1176
+ Y Q+Q+H + LV +R +E++LNY+F+D S+L EALTH S
Sbjct: 1187 QSEWGLYFTQYQLHRNVTPSHLVRFIGDIDSLVTLR-IEAVLNYTFQDKSILWEALTHSS 1245
Query: 1177 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVK 1236
YQRLEFLGDAVL ++IT YLY + SPG ++ ++S V N A S++
Sbjct: 1246 SSFSICGLNYQRLEFLGDAVLSFIITKYLYTQLGSSSPGVISHLKSEMVCNQFLACVSIR 1305
Query: 1237 HGLHK----------HILHA-SHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDI 1285
GL I+ A + ++ + ++ DS +K+ W +T+ PK GD+
Sbjct: 1306 LGLIDWLRVKKSDTVWIVDAYAQQVIEHLSQPADSIQKI------FWAHMTTAPKICGDV 1359
Query: 1286 IESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
E++ GAIFVDS + E V + + L +I P
Sbjct: 1360 YEAILGAIFVDSKFSIEKVDEFV---LNSLIKP 1389
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 13/221 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF---VAVFLVPKVV 79
R+YQL E A +N I L TG+GKTLIA++L+ + + ++ P ++V LVP +
Sbjct: 52 RSYQLWLFELAKAENIIAVLPTGTGKTLIALLLIE-HMHSIQSPEAANRKISVMLVPTIP 110
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA+ IKMH+ L+ G + + D WK + +++V+VMT +IL L Y
Sbjct: 111 LVSQQAQYIKMHSKLRTGFSSEGVSMKKHDFKYWKCALEENDVMVMTAEILKTSLDRGYI 170
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++M+ +++ DECHHAR H Y +M Y E + P+IFG+TASP K + E
Sbjct: 171 SISMLNLIVFDECHHARNLHPYRVLMQTHYALCSE---AIRPKIFGITASPAFGKGDNEE 227
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
I L++ ++ + T ES+ SN++ + ++
Sbjct: 228 -----SIKYLQSSLHCRAVTSTYESI-SNYVSSPVERVMYF 262
>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
Length = 1541
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 318/650 (48%), Gaps = 76/650 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR----SYAYLLRKPSPF-VAVFLVPK 77
R YQ+E E A K+NTI L+TGSGKTLIA++LLR + K P ++ FLV
Sbjct: 103 REYQIELFERAKKRNTIAVLDTGSGKTLIAVLLLRWVIDNEIENRAKGMPVKISFFLVAS 162
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ ++ + D K+ + G D WDGA W++E +++V+V T +IL L S
Sbjct: 163 VTLVYQQFSVLESNLDHKIARLCGADNTDRWDGARWQKEFYENKVVVCTAEILNQALAHS 222
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y +++ I +LI DE HH + H YA I+ +FY L + PRIFGMTASPI +K+
Sbjct: 223 YIRMSQINLLIFDEAHHTKKNHSYARIVKDFY---LMEDPATRPRIFGMTASPIDAKM-- 277
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D Q +LE+L++SK+ T + S+ E
Sbjct: 278 ---DVIQAAWELESLLDSKIATTSDMSLT-----------------------------EA 305
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSK-----INSTLLYCLSELGVWLALKAAETIS 312
+H E+L + + +L+R S+ + S + +E+ L A++
Sbjct: 306 IKKPAEHVMGYESLPRTDYETDLLRDVKSRYEHIPVFSNVFERAAEIACHLGRWCADS-- 363
Query: 313 CYESDFFAWEQLDGFGETIIKKF-GSDASQALVTYVPSGAEWSIGDD---SKFNLDSGLL 368
Y F+ E+ + I KKF S+ +V + E + ++ N+ L+
Sbjct: 364 -YILRAFSHEKAGKYEMDIEKKFHARRVSREMVELDDAVKEIREAVEYVQTRRNVLDKLV 422
Query: 369 TEKIVCLIESL-----LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
I + L L++ + D RCI+FV+R TA +L L S L H + ++
Sbjct: 423 HADISSKVLELHRYLRLQFERLSDHRCIVFVDRRYTARMLHILFSRLSTPHM--RGHFLV 480
Query: 424 G-NNSGIQCQS--RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
G NN G+ S ++Q + FR+G +N + ATS+ EEGLDV CNL+I FD T+
Sbjct: 481 GSNNGGLDEDSFTFRQQVMTLMRFRKGEINCLFATSVAEEGLDVPDCNLIIRFDMYTTMI 540
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSH-ASLPCSPLN 537
++QSRGRAR +NS ++ M++ G+ST L + MR+ E+L L + +
Sbjct: 541 QYVQSRGRARNRNSKFIHMIEIGNSTHSQTLNEVRYAEATMRRYCELLPEDRKLQGNQDS 600
Query: 538 NHMYGEDFYHVES-----TGTIATLSSSVSLIYFYCSRLP--SDGYFKPTPKFHINKEMG 590
+ E ++E+ +G T ++++S++ + + +P SD PT +
Sbjct: 601 LEVLLEREKNMETRVDPISGAKLTYANALSILAHFVTAVPTESDEPQHPTYVVSTRGQKY 660
Query: 591 ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLP 638
I + LP + P+++ I + + K K++A +AC L G L +NL+P
Sbjct: 661 IAEVILPGSSPLRSKIGKIHQKKSLAKRSAAFDACVYLRTQGHLNENLVP 710
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 182/419 (43%), Gaps = 57/419 (13%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PEL + ++T S PSI+HR +S L+ + + + C L A
Sbjct: 992 PELLKFSALTPEIAT--SCIVWPSIIHRFESYLICIEGCDTIGLDCGPRF------ALAA 1043
Query: 985 ITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVK 1030
T + H E LE +GD+FLK A + F N +E V+
Sbjct: 1044 FTKDSDNQGEHETERVNFQRGMGENYERLEFIGDTFLKTATTISTFIQNPNENEFAFHVR 1103
Query: 1031 KERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKI 1086
+ +++ N L + + KL +IR+ +F+ + W G +G + + F+ +
Sbjct: 1104 RMQMLCNKNLFGVALKLKLYEYIRSIAFNRRYWYPEGLKLLSGTGVIKGQEKENFHEPRN 1163
Query: 1087 YVTGRKKVKSKTVADVVEALIGA-FLS------------TGGENVGLIFLDRIGIKV--- 1130
+ G KT+ADV EALIGA +L+ T +D ++
Sbjct: 1164 HDLG-----EKTIADVCEALIGAAYLTWDQPGAWQAEHWTNAVKAVTTLVDSDDHRMLTW 1218
Query: 1131 DFVNVPYQRQFQVHAERLVNVRHL----ESLLNYSFRDPSLLVEALTHGS--YMLPEIPR 1184
D Y + AE R L E Y F+ P LL A H S Y+ ++P
Sbjct: 1219 DDYRTAYSKPHYQTAEATAVQRDLAQKVEREHAYRFKYPRLLYSAFMHPSVPYINEKVPN 1278
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
YQRLEFLGDA+LD +L+NKYP P +LT+ + A V+N V G HKH+
Sbjct: 1279 -YQRLEFLGDALLDQASITWLFNKYPDKDPQWLTEHKMAMVSNKFLGAVCVNIGFHKHLR 1337
Query: 1245 HASHELYKRINI-TVDSFE--KLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN 1300
H L +I D E +++ S W +V+ PK L DI+E+ GA+F+DS N
Sbjct: 1338 HYHAVLQSQITAYAADLMEAKRIAGDSRDYWTTVSDPPKCLPDIVEAYIGALFIDSDFN 1396
>gi|358058780|dbj|GAA95743.1| hypothetical protein E5Q_02400 [Mixia osmundae IAM 14324]
Length = 1610
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 185/600 (30%), Positives = 299/600 (49%), Gaps = 70/600 (11%)
Query: 3 PVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
P++ +++ T+ + R YQ E + A + NTI+ ++TG+GKTL+A+ML+ A
Sbjct: 76 PMAQDTEDTDLPTKTDGVRVRQYQHELFQKAKQSNTIIRMKTGAGKTLVAVMLILYEAAR 135
Query: 63 LRK-------PSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKE 115
LR+ PS + LVP V LV QQ AI+ T L+V + GDM V WD TW+
Sbjct: 136 LRREMMVQERPSRKLLCMLVPTVTLVNQQVAAIREQTSLQVRGFRGDMLVSAWDLRTWQI 195
Query: 116 EMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL--- 172
E +V+VMTPQILL+ LR +++++ I +LI DE HHAR KH YA I+ EFYH L
Sbjct: 196 EFDLADVVVMTPQILLNVLRSAFWRIENIALLIFDEAHHARKKHPYAHILDEFYHPLKRK 255
Query: 173 -----LETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNS---KVYTCASES 224
E D LPRI G+TASP+ + D I DLE M++ +V A+E
Sbjct: 256 LARSEAEMSD-RLPRILGLTASPVWTA-----SDLVSAISDLERRMDATLVEVKEHAAEL 309
Query: 225 VLSNFIPFSTAKFKFYKYD----EIPHALYTHLADELAMIELKHTRSLENLDLNEAQAEL 280
N P + + Y+ D + P + + ++++LK + ++
Sbjct: 310 AQYNRKP--SERCLTYRLDRAGIKTPFEIRLESSSIASLLDLKFWQRIDQ---------- 357
Query: 281 IRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLD-------GFGETIIK 333
+++++ + + C + + AL + + + + D+ E + F + +
Sbjct: 358 VKERLGLLGVDIYICEA---LAQALARSTSDAAVKIDYVPQEYWNEACLLHSSFVDVLEH 414
Query: 334 KFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIF 393
+++ + ++ PS A W G + + S +++K+ L++ L YR +D IIF
Sbjct: 415 TTLTESGKRHISDSPSTA-W-YGHLASADSSSSDISQKVRILLDHLETYRACKDFTAIIF 472
Query: 394 VERVITAIVLQSLLSELLPRHCTW----KTKYIAGNNSGIQCQ------SRKKQNEIVEE 443
V+ VLQ ++S+ W T Y+ G+ +G K+Q + V+
Sbjct: 473 VQTRYQTAVLQRIVSK-----AAWLDFLSTNYLVGSTTGNPADMAKGVMRPKQQLKPVQS 527
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
R G N + ATS+ EEGLD+ SCNL++ FDP T+ +IQSRGRAR NSDYL++ ++
Sbjct: 528 IREGRCNTLFATSVAEEGLDLSSCNLIVRFDPVSTLVGYIQSRGRARAVNSDYLVLAEA- 586
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNH--MYGEDFYHVESTGTIATLSSSV 561
D++ + + AS +M L+N + Y V S+G + TLSSSV
Sbjct: 587 DTSEEYDWQTLTASEQQMLDHTGQRDIFEEGELSNGETVSATPTYLVPSSGALLTLSSSV 646
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 186/380 (48%), Gaps = 30/380 (7%)
Query: 970 CMQNVTIPTI---KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGL 1026
++++ +P I +++EA+T ES+ETLGDS LK S L+ Y EG
Sbjct: 1059 AIRDLRLPPIAMHRMIEALTLPGSAVGRSYESIETLGDSVLKVLTSVHLYLAYPLKSEGA 1118
Query: 1027 LSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKI 1086
L+ + + N L E L ++ E W+ P D S ++ D F
Sbjct: 1119 LTCLRTNSVENVYLHHKAVESSLGKYLIHERMRLNTWL-PRDAEHSADMGDGCEFE---- 1173
Query: 1087 YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA- 1145
+K++ + ++D +E+++GA TGG ++ + + + R +
Sbjct: 1174 -----RKIQRRALSDCIESILGAAYLTGGLSMAMDTARAFNLPLGDGASWRSRSIEARRR 1228
Query: 1146 ERLVNVR--HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
ER V+ R LE L+ YSF + L++ALTH SY+ P P Y+R EFLGDA+LD+
Sbjct: 1229 ERSVSPRIGELEDLVGYSFSNNDCLIQALTHRSYLSPTTP-SYEREEFLGDAMLDFWAIT 1287
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYA-LSSVKHGLHKHILHASHELYKRINITVDSFE 1262
LY ++ G++P L+ +R+ V N ++ ++ L +++LH + E ++ I E
Sbjct: 1288 RLYARFDGITPQQLSRLRALLVCNGTLGYVAMLRLRLGEYVLHNADEFTDQLEIAQQQAE 1347
Query: 1263 KLSLG----STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM--- 1315
+ + W+ PK LGD +E++AGAIFVDSG + E+VF+ +L P+
Sbjct: 1348 AMPPAEFCEQVWFWDP----PKVLGDCVEAIAGAIFVDSGGDPELVFKYFDRILGPLMQY 1403
Query: 1316 ITPETMRFHPVRELTEYCQK 1335
I+P M PV L Q+
Sbjct: 1404 ISP-NMPADPVSRLAHLKQE 1422
>gi|189205613|ref|XP_001939141.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975234|gb|EDU41860.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1572
Score = 233 bits (593), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 303/657 (46%), Gaps = 76/657 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQ E + A +N I L+TGSGKT IA +LLR + + +P +A FLV
Sbjct: 118 RDYQTELFQRAKVENVIAVLDTGSGKTHIATLLLRHVLDAELEHRAKGDAPKMAFFLVDS 177
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ+ ++ D V G MG W TW+ + V+V T ++L+ + S
Sbjct: 178 VNLVFQQSNVLRCGLDQNVEGICGSMGASLWSRKTWQTYFDTNMVVVCTAEVLVQCMMHS 237
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA +M ++Y L+ S PRIFGMTASP+ +K S
Sbjct: 238 FITMSQINLLIFDEAHHAKSNHPYARLMKDYYTHELDL--SKRPRIFGMTASPVDTKGLS 295
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
++ Q DLE L+ +K+ T ++ SN I + A+YT L DE
Sbjct: 296 ADH-IKQAASDLEKLLYAKIATTTESTLASNSISRPDEEV----------AVYTRLQDEF 344
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
L + DL + + K + ELG W + Y S
Sbjct: 345 E-TPLHQKIKAKFGDLPSFKKFFVASKHHGV---------ELGRWAS-------DMYWSF 387
Query: 318 FFAWEQLDGFGETIIKKFG----SDASQ---ALVTYVPSGAEW-SIGDDSKFNLDSGLLT 369
FA EQ F E K D Q A + + AE+ D K L ++
Sbjct: 388 AFADEQSRKFQERERLKHNRANVDDDVQKWDAKLKRLQEAAEFVQQFDFGKCTLSDKDVS 447
Query: 370 EKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
K++ L L Y D RCI+FVE+ TA +LQ + + L + + + G N+
Sbjct: 448 SKVLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGGSNL--RCSVLVGVNNR 505
Query: 429 IQCQSRKKQNEI--VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
I Q+ +N+I V +FRRG +N + ATS+ EEGLD+ CNLV+ FD RT+ +++QSR
Sbjct: 506 ISEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSR 565
Query: 487 GRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM--YGED 544
GRAR +NS YL M++ G+ + R+ + MR LP N G D
Sbjct: 566 GRARHRNSKYLHMLEDGNHDHRERIMDVKQDEQVMRNFC---RDLPQDRQINEFDKDGTD 622
Query: 545 FYHVEST---------GTIATLSSSVSLIYFYCSRLPS-DGYFKPTPKFHINKEMG---- 590
E G + SS+S++ + + LP D P + I+ E+
Sbjct: 623 LLTFEDKLFPTFVTKPGAKLSYRSSLSILNHFVATLPGPDRQTMLQPTYVISSEVQRNVL 682
Query: 591 -------ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+C + LP P+ ++I QG K +A + C +L++ G L DNLLP
Sbjct: 683 DPQRRGFVCEVILPEYSPVTSIIGDVQGKKTIAKCSAAFKTCLQLYKKGYLDDNLLP 739
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 214/507 (42%), Gaps = 86/507 (16%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPE--LCRIIMAPISLSTFYSFTFVP 947
+P+L +I +N+L++ +++ E + + PE L + P + + +P
Sbjct: 985 QPVLEVEKIPFRRNHLARVEDKEKGELDDLKTYVCPEPLLISNLATPFVVMCY----VLP 1040
Query: 948 SIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFH----------- 995
+I+HR +S L+A LD C + ++ + LEA+T + H
Sbjct: 1041 AIIHRFESYLIA-------LDACGVLDLKVSPALALEALTKDSENSEEHGEEKINFKSGM 1093
Query: 996 ---LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKL--------- 1043
E LE LGD FLK A S +F + +E V++ ++ N L +
Sbjct: 1094 GPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKVTS 1153
Query: 1044 --GCEQ--KLPGFIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
G E+ KL +IRT+SF + W G G + DD ++ +
Sbjct: 1154 VDGTERDIKLYNYIRTDSFSRRTWYPDGMKLLRGKGVNKSEDD--------WLKLTHNLG 1205
Query: 1096 SKTVADVVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP---------YQRQFQV 1143
K++ADV EA IGA GG + + + F N P Y +Q+
Sbjct: 1206 DKSIADVCEAFIGAAFQEHYKGGRWNAADWDETVKAVKLFANSPDHEMSKWTDYYAAYQM 1265
Query: 1144 HAERLVNVR--------HLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLG 1193
++ + +E+ Y F+ P LL A H SY + IP YQRLEFLG
Sbjct: 1266 PKYQIADATAAMLDMACKIEAKHPYHFKYPRLLRSAFAHPSYPYIYENIPN-YQRLEFLG 1324
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
D++LD +LY KYP P +LT+ ++ V+N VK G H +I + L +
Sbjct: 1325 DSLLDMAFITHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHVYIKQNTAILTSQ 1384
Query: 1254 IN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQ---- 1306
I + E+ + + W +++ PK L D+IE+ AIFVD+ + VV
Sbjct: 1385 IRDYVLEAQEAEREASSAVDYWVTISEPPKCLADVIEAYTAAIFVDAEFDFSVVQDFFNM 1444
Query: 1307 SIRPLLEPMITPETMRF---HPVRELT 1330
++P E M F HP L+
Sbjct: 1445 HLKPFFEDMTLEAYENFASNHPTTRLS 1471
>gi|336367926|gb|EGN96270.1| hypothetical protein SERLA73DRAFT_112480 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1460
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 205/703 (29%), Positives = 320/703 (45%), Gaps = 99/703 (14%)
Query: 14 VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF 73
VS LP R YQ E A N I L+TGSGKT I+I+L++ + L K V VF
Sbjct: 11 VSESILP--RRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIK-WIVLQEKAKRKVIVF 67
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LVPKV LV QQA++I HT L+V + G + +D D A WK+ + +V+VMT QI L+
Sbjct: 68 LVPKVALVKQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDVVVMTAQIFLNI 127
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L S++ + + +LI DECHH R H Y IM E++ +T S+ P++FGMTASPI +
Sbjct: 128 LTHSHWSVEKVSLLIFDECHHTRKNHAYNGIMHEYF----QTIPSDRPKVFGMTASPIWN 183
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASE------------SVLSNFIPFSTAKFKFYK 241
+D + LE +++ V V+ F P S Y
Sbjct: 184 P-----KDAEGSLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDT----YD 234
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLE---NLDLNEAQAELIRKKVSKINSTLLYCLSE 298
Y LY L D L++ T ++E +D + ++ R + ++ L+ ++
Sbjct: 235 Y------LYPTLWDCLSLF----TNAVEINIPVDKLHMKYQMTRNSLGAFSAD-LFLYTD 283
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD 358
+ L E S F LDGF I S+++Q+ + E
Sbjct: 284 IKTRLIHFIDELESSQNETFLG---LDGFDHHIDVDESSESAQSQFPAISPDLEQIDAIL 340
Query: 359 SKFN--LDSG-------------LLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVL 403
S+F DSG T K+ L+E LLE+ I+FVE+ A L
Sbjct: 341 SEFRPFFDSGTEVPAVPIPVPLAWCTPKVNALVEVLLEHYS-PTFHAIVFVEQRQVAACL 399
Query: 404 QSLLSELLPRHCTWKTKYIAGN----------NSGIQCQSRKKQNEIVEEFRRGLVNVIV 453
+L + + + G+ NS + +Q + VE FR+G +N++V
Sbjct: 400 AKILPCIPELRGYVRCAELVGHGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLV 459
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+ EEGL +C++V+ FDP + + ++QSRGRAR + S +++M + S R
Sbjct: 460 ATSVAEEGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNA 519
Query: 514 YLASGNKMRKEVLSHASLPCSPLN---------------NHMYGEDFYHVESTGTIATLS 558
+L S ++++ + + L+ + + Y V STG + T
Sbjct: 520 FLKSEPELKRVYQTREEPAATRLDPGEDSEEGEVEEDDPADVAVRERYIVPSTGAVLTYD 579
Query: 559 SSVSLIYFYCSRLPSDGYFKPT-PKFHINKEMGICTLYLPNN--CPIQTVIAQG----NI 611
S+V+L+ CS +P D Y P PK+ + + L LP++ PI + G +
Sbjct: 580 SAVNLLNHLCSLIPHDAYTPPQLPKYSGDYAV---MLELPSSLPLPIDRLFFSGPERRSK 636
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLPDIVVE---KHDAQKRG 651
+ K+A A K+LH++ D LLP + DA RG
Sbjct: 637 REAKRAVAFLAVKELHRLDVFDDYLLPATSSKGRGTEDADGRG 679
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 207/458 (45%), Gaps = 53/458 (11%)
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK-------------QKEPSK 918
TY+ ++ +R+ + RE + YL +C +++ ++
Sbjct: 860 TYRDYFVQRWTRK---KREAFVPENSFLIEATYLPRCPSSVYRVREHLIDLDLCKRQIAR 916
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA------VNLKNMLLDHCMQ 972
+P + CR + S + +F +P + R+ + A + L + D ++
Sbjct: 917 AGLLVPKDACRRVH--FSEDVYRAFLLLPKLCRRVTDVYRARQERIELGLPMIAEDLLIE 974
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
T+PT + F+ + LETLGDS LK ++ + Y + HEG LS ++
Sbjct: 975 ASTLPTTSLT-----------FNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSHLRQ 1023
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK 1092
+SN L E +L F+ +ES + W Y + +D+ +I + R+
Sbjct: 1024 NSVSNRTLLSRAKEIELERFLNSESHNLHFW--------RYTVPEDTDSTLCRIRRSTRR 1075
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVN-- 1150
+ +++ D +EA +GA TGG ++ L +G+ +P+ ++ E
Sbjct: 1076 EFPRRSLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGG-PIPWSLKYSRRPESSPAPH 1134
Query: 1151 -VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
L+ L Y F LLVEA TH S+ YQRLEFLGDAV+D ++ YLY ++
Sbjct: 1135 LFADLQESLCYEFHRGDLLVEAATHPSFAT-SASSSYQRLEFLGDAVIDLVVLNYLYRRF 1193
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGS 1268
P + G L+ RS +V A SV+ LHK +L + EL IN V E S+
Sbjct: 1194 PQANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVED 1253
Query: 1269 TF--GWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
GW+ PKAL D++ES+ GAIFVDS N E V
Sbjct: 1254 IINKGWK--YDPPKALSDVLESVVGAIFVDSAYNFEKV 1289
>gi|387015528|gb|AFJ49883.1| Endoribonuclease Dicer-like isoform 1 [Crotalus adamanteus]
Length = 1917
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 214/714 (29%), Positives = 324/714 (45%), Gaps = 120/714 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L++ +Y +R K
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIREDFKKKG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ +K H+DLKVG Y + W W +E +K++VLVMT Q
Sbjct: 94 KRTVFLVNSASQVAQQVSTVKTHSDLKVGDYSSVEITEAWTKERWNQEFAKYQVLVMTCQ 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ + L+ I +LI DECH A H Y IM +L E+ S PRI G+TA
Sbjct: 154 MALNVLKNEHLALSNINLLIFDECHLAIQDHPYREIM-----KLCESCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K +E + +KI LE ++ S T VL + T++ D P++
Sbjct: 208 SILNGKCDPAELE--EKIQKLEKILKSSAETATDLVVLDRY----TSQPCEIVVDCGPYS 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKV-SKINSTLLYCLSELGV 301
+ L + L + EL S N D N E + LI K++ S + LL LG
Sbjct: 262 DKSGLYERL-LTELDDALSFLN-DCNITVHCRERDSILISKQILSDCRAVLLV----LGP 315
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T ++K + +
Sbjct: 316 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------ 363
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 ---SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE 420
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 421 DEEIEEKEKTETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 480
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 481 GHGIGKNQPRSKQMEIEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ S + L+ Y A +R + + +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADSDKIKCFEEDLKTYKAIEKILRNKCSKSVDISETE 600
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
+ +D + E G T+++++ I YC+RLPSD + PK + +
Sbjct: 601 NEPIIDDDDIFPPYVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELLD 660
Query: 591 ---ICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I + + A L C+KLH+IG L D+L+P
Sbjct: 661 NTFYATLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 175/374 (46%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQF--- 1141
+ K++AD VEAL+G +L++ GE +FL +G+KV D V Y+ F
Sbjct: 1549 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWDNVLCSYRDHFNNQ 1608
Query: 1142 QVH--------------------------------------AERLVN-----VRHLESLL 1158
Q H AE +N + E +
Sbjct: 1609 QKHSSVNCISATLANQETSHYKDLVYGCLKIPPRCMFDHPDAETTLNHLISGFENFEKKI 1668
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1669 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1728
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1729 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1784
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DS + E+V+Q P++ P+I +
Sbjct: 1785 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSEMSLEMVWQVYYPMMRPLIEKFSANV 1844
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1845 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1898
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1899 AARRALRSLKANQP 1912
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1296 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1355
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1356 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1383
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1292 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1344
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1345 MRSKKVSN 1352
>gi|330913942|ref|XP_003296428.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
gi|311331414|gb|EFQ95479.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
Length = 1572
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 306/654 (46%), Gaps = 70/654 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQ E + A +N I L+TGSGKT IA +LLR + + +P +A FLV
Sbjct: 118 RDYQTELFQRAKGENVIAVLDTGSGKTHIATLLLRHVLDAELEHRAKGGAPKMAFFLVDS 177
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ+ ++ D V G MG W TW+ + V+V T ++L+ + S
Sbjct: 178 VNLVFQQSNVLRCGLDQNVEGICGSMGASLWSRKTWQTYFDTNMVIVCTAEVLVQCMMHS 237
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA +M ++Y L+ S PRIFGMTASP+ +K S
Sbjct: 238 FITMSQINLLIFDEAHHAKSNHPYARLMKDYYAHELDL--SKRPRIFGMTASPVDTKGLS 295
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
++ Q DLE L+ +K+ T ++ SN I + A+YT L DE
Sbjct: 296 ADH-IKQAAGDLEKLLYAKIATTTESTLASNSISRPDEEV----------AIYTCLQDEF 344
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
L + DL + + K + ELG W + Y S
Sbjct: 345 E-TPLHQKIKTKFGDLPSFKKFFVASKRHGV---------ELGRWAS-------DMYWSF 387
Query: 318 FFAWEQLDGFGETIIKKFG----SDASQ---ALVTYVPSGAEWSIG-DDSKFNLDSGLLT 369
FA EQ F E K D Q A + + AE+ D + L ++
Sbjct: 388 AFADEQSRKFQERERLKHNRANVDDDVQKWDAKLKRLQEAAEFVRQFDFGECTLSDKDVS 447
Query: 370 EKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
K++ L L Y D RCI+FVE+ TA +LQ + + L + + + G N+
Sbjct: 448 SKVLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGGPNL--RCSVLVGVNNR 505
Query: 429 IQCQSRKKQNEI--VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
I Q+ +N+I V +FRRG +N + ATS+ EEGLD+ CNLV+ FD RT+ +++QSR
Sbjct: 506 INEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSR 565
Query: 487 GRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK------EVLSHASLPCSPLNNHM 540
GRAR +NS YL M++ G+ + R+ + MR + +N M
Sbjct: 566 GRARHRNSKYLHMLEEGNHDHRERIMDVKRDEQVMRNFCRDLPQDRQINEFDKDSMNLLM 625
Query: 541 YGEDFYHVESTGTIATLS--SSVSLIYFYCSRLPS-DGYFKPTPKFHINKEMG------- 590
+ + + + T A LS SS+S++ + + LP D P + I+ E
Sbjct: 626 FEDKSFPIFVTKPGAKLSYRSSLSILNHFVATLPGPDRQTLLQPTYVISSEFQHNAIDPQ 685
Query: 591 ----ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+C + LP P+ ++I QG K +A + C +L++ G L DNLLP
Sbjct: 686 RRGFVCEVILPEYSPVTSIIGDIQGKKTIAKCSAAFKTCLQLYKKGYLDDNLLP 739
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 214/507 (42%), Gaps = 86/507 (16%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPE--LCRIIMAPISLSTFYSFTFVP 947
+P+L +I +N+L++ +++ E + + PE L + P + + +P
Sbjct: 985 QPVLEVEKIPFRRNHLARIEDKEKGELDDLKTYVCPEPLLVSNLATPFVVMCY----VLP 1040
Query: 948 SIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFH----------- 995
+I+HR +S L+A LD C + ++ + LEA+T + H
Sbjct: 1041 AIIHRFESYLIA-------LDACEVLDLKVSPALALEALTKDSENSEEHGEEKINFKSGM 1093
Query: 996 ---LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQK---- 1048
E LE LGD FLK A S +F + +E V++ ++ N L + +K
Sbjct: 1094 GPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKVTS 1153
Query: 1049 ---------LPGFIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
L +IRT+SF + W G G + DD ++ +
Sbjct: 1154 ADGTERDIQLYNYIRTDSFSRRTWYPEGMKLLRGKGVNKSEDD--------WLKLTHNLG 1205
Query: 1096 SKTVADVVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP---------YQRQFQV 1143
K++ADV EA IGA GG + + + F N P Y +Q+
Sbjct: 1206 DKSIADVCEAFIGAAFQEHYKGGRWNAADWDETVKAVKLFANSPDHEMSNWADYYAAYQM 1265
Query: 1144 HAERLVNV--------RHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLG 1193
++ + R +E+ Y F+ P LL A H SY + IP YQRLEFLG
Sbjct: 1266 PKYQIADATAAMLDMARKIEAKHPYHFKYPRLLRSAFAHPSYPYIYENIPN-YQRLEFLG 1324
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
D++LD +LY KYP P +LT+ ++ V+N VK G H +I + L +
Sbjct: 1325 DSLLDMAFITHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHVYIKQNTAILTSQ 1384
Query: 1254 IN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQ---- 1306
I + E+ S G+ W +++ PK L D+IE+ A+FVD+ + VV
Sbjct: 1385 IRDYVLEAQEAERESGGAVDYWVTISEPPKCLADVIEAYTAALFVDAEFDFSVVQDFFNL 1444
Query: 1307 SIRPLLEPMITPETMRF---HPVRELT 1330
++P E M F HP L+
Sbjct: 1445 HLKPFFEDMTLDAYENFASNHPTTRLS 1471
>gi|451856503|gb|EMD69794.1| hypothetical protein COCSADRAFT_341850 [Cochliobolus sativus
ND90Pr]
Length = 1575
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 194/669 (28%), Positives = 309/669 (46%), Gaps = 95/669 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQ E + A +N I L+TGSGKT IA +LLR + R P +A FLV
Sbjct: 118 RDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVLDMELDHRARGGIPRMAFFLVDS 177
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA ++ D V G MG W +TW+ K+ +V T ++L+ + S
Sbjct: 178 VNLVFQQANVLRCGLDQNVEGICGSMGASLWSKSTWQSYFDKNMAIVCTAEVLVQCMMHS 237
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA +M ++Y L ET S PRIFGMTASP+ +K S
Sbjct: 238 FIAMSQINLLIFDEAHHAKSNHPYARLMKDYY--LQETDVSQRPRIFGMTASPVDTKGLS 295
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
++ + +LE L++SK+ T ++ SN I + A+Y L +E
Sbjct: 296 ADH-IKEAARNLEKLLHSKIATTTESTLASNSISRPDEEV----------AMYPRLREEY 344
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS------ELGVWLALKAAETI 311
K I+ + I + Y L+ ELG W +
Sbjct: 345 ETPLHKK----------------IKARFGDIRAFDKYFLASRRHGRELGRWAS------- 381
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQAL------VTYVPSGAEWSIGDDSKFNLDS 365
Y S F EQ + K + + V + AE+ +FN +
Sbjct: 382 DMYWSFVFTDEQSRKLEQRERLKHSKNRPDEVKEWDVKVKRLQEAAEFV----QQFNFGA 437
Query: 366 GLLTEK-IVCLIESL-----LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
L+++ + ++ L L Y ++ RCI+FVE+ TA +LQ + S++ H +
Sbjct: 438 CTLSDQDLSSKVQKLHYWLNLYYERSDEARCIVFVEQRQTARLLQLIFSQIGGPHL--RC 495
Query: 420 KYIAGNNSGIQCQSRKKQNEI--VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G NS Q+ +N+I V +FRRG +N + ATS+ EEGLD+ CNLV+ FD R
Sbjct: 496 SVLVGVNSREHEQNISLRNQIITVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYR 555
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK-----------EVL 526
T+ +++QSRGRAR +NS YL M++ G+ + R+ + MR+ +
Sbjct: 556 TMIAYVQSRGRARHRNSKYLHMIEEGNHDHRERVMDVKLDEQVMRQFCRELPQDRHIDEY 615
Query: 527 SHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS---DGYFKPT--- 580
+ S+ + +Y + G + SS++++ + + LP +PT
Sbjct: 616 DNDSMDLLTFEDQLYPS---FITKLGAKLSFRSSLAILNHFVATLPGPDRQTMLQPTYVV 672
Query: 581 -PKFHIN-----KEMGICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGAL 632
P + + + + + LP + P+ T I Q K +A +AC +L++ G L
Sbjct: 673 CPDLNYDGLDPQRRGFVSEVILPEHSPVNTTIGDVQSKKAIAKCSAAYKACLELYKKGYL 732
Query: 633 TDNLLPDIV 641
DNLLP +
Sbjct: 733 DDNLLPTTI 741
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 212/487 (43%), Gaps = 81/487 (16%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRI--IMAPISLSTFYSFTFVP 947
+P+L +I +N L++ +++ E + + PE +I + P + + +P
Sbjct: 984 QPVLQAEKIPLRRNQLARIEDKEKGEFGNLKAYICPEPFQISNLATPFVVMCY----VLP 1039
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH------------ 995
+I+HR +S L+A+ N+L N+ + LE++T + H
Sbjct: 1040 AIIHRFESYLIALEACNVL------NLKVNPALALESLTKDSENSEEHDEEKINFKSGMG 1093
Query: 996 --LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKL---------- 1043
E LE LGD FLK A S +F + +E V++ ++ N L +
Sbjct: 1094 PNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLMETAVGKKKVVSA 1153
Query: 1044 -GCEQKLP--GFIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
G EQ L +IRTESF + W G G+ + DD ++ +
Sbjct: 1154 EGTEQDLQLYKYIRTESFSRRTWYPEGLKLLKGKGANKSQDD--------WLKLTHNLGD 1205
Query: 1097 KTVADVVEALIGAFLS---TGGENVGLIFLDRIGIKVDFVNVP-------------YQR- 1139
K++ADV EA IGA L TGG + + + F N P YQ+
Sbjct: 1206 KSIADVCEAFIGAALQEHYTGGLWKPTDWDEAVKAVKLFANSPDHTMSKWSDYYEAYQKP 1265
Query: 1140 QFQ---VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGD 1194
++Q A L + +E Y F+ P LL A H SY M IP YQRLEF GD
Sbjct: 1266 KYQTADASAAMLDMAQKIEMKHPYHFKYPRLLRSAFAHPSYPYMYENIP-SYQRLEFAGD 1324
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
A+LD +LY KYP P +LT+ ++ V+N VK G H HI + L +I
Sbjct: 1325 ALLDMAFITHLYFKYPDKDPHWLTEHKTPMVSNKFLGAVCVKLGWHVHIKQNTATLTNQI 1384
Query: 1255 N---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
+ + E+ + G+ W +++ PK L D+IE+ +IFVDS E F ++
Sbjct: 1385 RDYVLEAEEAEREAGGAVDYWVTISDPPKCLADVIEAYVASIFVDS----EFDFGVVQTF 1440
Query: 1312 LEPMITP 1318
E + P
Sbjct: 1441 FEMHLKP 1447
>gi|157167186|ref|XP_001652212.1| dicer-1 [Aedes aegypti]
gi|108877338|gb|EAT41563.1| AAEL006794-PA [Aedes aegypti]
Length = 1658
Score = 230 bits (586), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 314/1314 (23%), Positives = 560/1314 (42%), Gaps = 171/1314 (13%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVF 73
D +P R+YQ +++NTI++L TG+GKT IA+M+++ L KP F
Sbjct: 10 DFIP--RDYQRTMKTICMQKNTIIYLPTGAGKTHIALMVIKEMGKDLDKPLTEGGKRTFF 67
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
+V V L QQAE + + Y D VD W W EE +K++V+V T QILLD
Sbjct: 68 VVNTVALAKQQAEFLSHNLTYDTSIYTSDRNVDAWKQDKWLEEFAKYQVIVCTCQILLDV 127
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L+ Y + I +LI DECHH G+H IM +F L S+ PR+ G++ +
Sbjct: 128 LKHGYLSVKHINLLIFDECHHGVGEHPMHGIMEQF----LRVPKSDHPRVIGLSGMLLYK 183
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-KYDEIPHALYTH 252
++ S ++ LE N+ + T S + FST + Y + L
Sbjct: 184 QIKSVAL-VSPELERLENTFNATIATVGSYDAFTEVCKFSTDPNELLVSYSTL--RLSPV 240
Query: 253 LADELAMIELKHTRSLENLDL----NEAQAELIR-----KKVSKINSTLLYCLSELGVW- 302
+AD + I ++++E L N+ +A L K++ K+ + L+Y L + G++
Sbjct: 241 MADIVNNIN-AFSQTIEEFHLPKYLNQNKALLKDRPKPLKEIRKLFTELIYQLGDTGLFG 299
Query: 303 -----LALKAAETISCYESDF----FAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
L L + +SD A F E++ + + + SG +
Sbjct: 300 GSIALLGLIVQFELDKRQSDSSMLRLALRSCITFCESLRHQ---------IEKLMSGLDM 350
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+K S L +++ +E L E + + +IFV+R +A VL LL
Sbjct: 351 K----TKLTKFSSLKVRQLIDQLEKLYEENRDKKAKTLIFVQRRFSAKVLYHLLKIYFAE 406
Query: 414 HCTWK---TKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
++ GNN + Q S KK ++E F++ NVIV T++LEEG+D+Q
Sbjct: 407 TEDANLIVPDFMVGNNGSMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQ 466
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS---TTQSRLENYLASGNKMR 522
CN V+ +D +T S+ QS+GRARM+NS Y++M+ + + + RL Y + ++R
Sbjct: 467 MCNTVVKYDHPQTFASYQQSKGRARMKNSQYMVMLDNENRHIFLEKYRL--YKSIEEELR 524
Query: 523 KEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
+ ++ PL+ ++ E + + + G S++ L+ YC +P D +
Sbjct: 525 RCLIGKTINRPDPLDADVHKELYNEIIPPFFTAKGAKLDALSAIQLLNRYCMGMPRDAFT 584
Query: 578 KPTPKF-HINKEMG--ICTLYLPNNCPIQTVIAQG---NIKTLKQAACLEACKKLHQIGA 631
+ I+ + G I + LP ++ I+ NIK K++A AC+KL++
Sbjct: 585 NTNVTWERIDLKDGRIIVEVLLPLQSTVREKISGNPMRNIKLAKRSAAFNACRKLYENKE 644
Query: 632 LTDNLLP-DIVVEKH---DAQKRGNEPYNAE-------------HPIYFPPELVNQSPQD 674
L ++L+P D + + D R + ++A+ H I +P + PQ
Sbjct: 645 LNEHLIPIDCKYQLNNLKDVYFRHWKDFDADLGKLAGTQKCIRTHAIQYPKQTTECFPQP 704
Query: 675 TKITYHCYLIELKQHFNYDISARNIVL------------AMRTELESEIKKVNFDLEVER 722
K Y Y++ + F D + N+ + M T+ + K+ F V
Sbjct: 705 GKPCY-IYVLRIAAGFAQDPTNDNVNIFHSLYSSENNFGLMTTKPLPALAKMKF--FVTL 761
Query: 723 GRLTVNLKHLGRIQLIPN-----QVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNL 777
G + V+++ + +PN ++ L R+F +T+FR ++ L K D DN
Sbjct: 762 GLINVHIEETPIV--LPNGGSEIELALLRQFHVTVFRDVL--KLWKEFLCCD----YDNE 813
Query: 778 EIDYLLLP-STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHN 836
E +L++P +DWK + N S+ ST I K H
Sbjct: 814 ENSFLVVPLKNSTHLDWKLIREF----QNLSEPPSEIST-----IARNKMEFEADKYRHK 864
Query: 837 SLVCTPHNG--QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN 894
++ N Q Y +T V HL S F N +Y ++ + Y + + + L+
Sbjct: 865 VILPWYKNNKEQPYVVTMVHEHLTPESPFP--NPEYGSYANYFSQAYHLAVVKPDQFLIE 922
Query: 895 GRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
+ I N L+ + K + L PELC P + T +PS +
Sbjct: 923 VKGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSAL 980
Query: 951 HRLQSLLLAVNLKNMLLD----HCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSF 1006
HRL LLLA N++ L C++N TI + V K ++ LE L+ +
Sbjct: 981 HRLHYLLLAENIRVDLATGANVGCLENHTIEDVDV-----EYKERKGKQLEELQLMEFEE 1035
Query: 1007 LKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD-PKMWII 1065
+ + + + L++ + ++ +C + + LP E D + W
Sbjct: 1036 DEDEDDEFDLEEAK---RSLVAPENLSELARNQMCSITGDIPLPWQEDEEPVDIERNW-- 1090
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
D +L+ ++F + ++ R+K + +++ + + + + + LD
Sbjct: 1091 --DQVSKLDLDYYNVFVNKFSDLSMREKAAER-ISNAYTSAVYRRAAGSPKREAMAILD- 1146
Query: 1126 IGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
VP ++F + +L + +N + + +++ T S + ++
Sbjct: 1147 ---------VPVDQKFAIKLLQLTPA----NTVNVNLQQKNIIKALTTKSSSDVFDL--- 1190
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
+R E LGDA L + I++YL + G+LT ++ V+N ++K+GL
Sbjct: 1191 -ERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKGQIVSNRNLVYCAIKYGL 1243
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 201/436 (46%), Gaps = 83/436 (19%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV + +++A+TTK + F LE E LGD+FLK++ S L K ++ HEG L+ K
Sbjct: 1167 NVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKG 1226
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKM-W---------------------------- 1063
+I+SN L + LPG ++ FDPK W
Sbjct: 1227 QIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIKRTMQSVNHSARVLYRL 1286
Query: 1064 ----------IIPGDNSGSY----ELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA 1109
++ NS + EL+ + ++ + KT AD +EAL+G
Sbjct: 1287 TLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMGDKTPADAMEALLGV 1346
Query: 1110 FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV-------------NVRHLES 1156
+ + G L GI NV ++ +RL N R +ES
Sbjct: 1347 CVQSVGIERSFKLLPHFGILPKTHNVLKLLADKIENQRLKTHIDIREVDAFLKNYRRIES 1406
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + P +SPG
Sbjct: 1407 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1466
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRINITV 1258
LTD+RSA VNN A V+HGLH +IL S HE+ ++N+ V
Sbjct: 1467 LTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQEQNKHEITDQVNLLV 1526
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL--EPMI 1316
+ ++ PKALGD+ ESL A+F+DSG + +Q I ++ E +
Sbjct: 1527 EESDR-------KMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGMMGNEILT 1579
Query: 1317 TPETMRFHPVRELTEY 1332
E VR+L E+
Sbjct: 1580 FTENTPIQIVRQLYEF 1595
>gi|115478498|ref|NP_001062844.1| Os09g0315100 [Oryza sativa Japonica Group]
gi|113631077|dbj|BAF24758.1| Os09g0315100, partial [Oryza sativa Japonica Group]
Length = 245
Score = 230 bits (586), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 154/233 (66%), Gaps = 7/233 (3%)
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+++LEA+TTKKCQE+F ESLETLGDSFLKY ++ LF Y+ HEG+L+ K+ +ISNA
Sbjct: 16 LQILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNA 75
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPG---DNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
ALC+L C L G+I E F+P+ WIIP D G+ ++ S +Y + +K
Sbjct: 76 ALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERGNKKI---SFLAPNGMYSQRKMSIK 132
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VNVPYQRQFQVHAERLVNVRHL 1154
SK +AD VEALIGA+LST GE + + +G+ ++F +P +R+ + AE ++VR L
Sbjct: 133 SKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFIDVRSL 192
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
E +L Y F D LL+EALTHGSY CYQRLEFLGDA+LD+L T Y Y+
Sbjct: 193 EGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYS 245
>gi|324500060|gb|ADY40039.1| Endoribonuclease dcr-1 [Ascaris suum]
gi|333440972|gb|AEF32761.1| DCR-1 [Ascaris suum]
Length = 1970
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 205/674 (30%), Positives = 327/674 (48%), Gaps = 92/674 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A + N IV L TGSGKT IA++L++ + L +P A FLV KV
Sbjct: 40 RDYQIELLDKACRGNVIVPLGTGSGKTFIAVLLIKEHTCKLIEPLENGGKRAFFLVDKVS 99
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQA I+ HT LKVG+ G + D W D + + +++H+V+V T Q+ LD L ++
Sbjct: 100 LVDQQAAHIEHHTTLKVGRMHGHLNSDIWSDQSKFNTFIAEHQVVVSTAQVFLDVLDHAF 159
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
F +N +LI DECHH G KH Y IM HR + S P+I G+TAS I +K
Sbjct: 160 FNMNNAALLIFDECHHVLGSKHAYRVIM----HRYSQLPKSERPKILGLTASLINNKTPP 215
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF------YKYDE--IPHAL 249
S + + + LE +M S + T + L + + +F + YDE +
Sbjct: 216 SNLE--RVLEKLELIMQSNIETASD---LVSVAKYGAKPKEFVIECEDFIYDECKASRKV 270
Query: 250 YTHLADELAM-IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAA 308
+ L D AM +E + ++D + E I + +S ++G W
Sbjct: 271 ISLLEDLRAMCMECREFHPEFDVDPRKPLMEAINRTLS--------VFKQMGPW------ 316
Query: 309 ETISCYESDFFAWEQLDGFGETIIKKFGSD-ASQALVTYVPSGA-----EWSIGDDSKFN 362
C AW+ F + K G ++ + ++ G I D+ F
Sbjct: 317 ----C------AWKVCQLFQRQLKKHIGQPFLTEKQILFLQMGETTMRLSKKILDEKVFG 366
Query: 363 LD-----SGLLTEKIVCLIESLLEYRGVEDIR--------C-IIFVERVITAIVLQSLLS 408
+ LL +IV L+E +L+Y +I C IIFV++ A V+ +L+
Sbjct: 367 VKCYAELKPLLPNRIVRLME-ILDYYSPSNISKIDPNFSFCGIIFVKQRYVAYVMNTLVK 425
Query: 409 ELLP----RHCTWKTKYIAGNNSG-IQCQS----RKKQNEIVEEFRRGLVNVIVATSILE 459
+ R + ++ G +S I + K+Q E++ +FR+ +N++VATS+LE
Sbjct: 426 AIAKWDKDRFGYVVSDFVIGYSSANIGSEETMALHKRQEEVLRKFRQKQLNLLVATSVLE 485
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASG 518
EG+DV+ CN+VI FD ++IQS+GRAR + + Y ++++ D + S L+++
Sbjct: 486 EGVDVKQCNVVIRFDRPTDYRAYIQSKGRARKEGASYYILIEHSDRANCSSDLKDFFQIE 545
Query: 519 NKMRKEVLSHASLPCS-PLNNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSD 574
+ K + + P PL + + Y VESTG T+SS+++L+ YC++LPSD
Sbjct: 546 QMLLKRYRTAHNPPDGMPLCSEQEVDAKVAPYVVESTGARVTMSSAIALVNRYCAKLPSD 605
Query: 575 GYFKPTPKFHI------NKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQ-AACLEACK 624
+ + P+ I + L LP N P++ I K L Q A LE C+
Sbjct: 606 IFTRLVPQNRIIPVSVNGSILYKAELLLPINSPLKNGIMLTTPMETKKLAQMAVALETCR 665
Query: 625 KLHQIGALTDNLLP 638
+LH+ L D+LLP
Sbjct: 666 RLHEHKELNDHLLP 679
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 171/333 (51%), Gaps = 48/333 (14%)
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYQRQFQVH 1144
K++AD VEALIGA L G L F+ +G+KV F++ P + + +
Sbjct: 1633 KSIADAVEALIGAHLLELGPTATLKFMKWVGLKVLTEPVTLDPPLLRFIDTPQEPELAIC 1692
Query: 1145 A--ERLVNVR--HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
E V + LE + Y F+D + L++A TH SY I CYQRLEFLGDAVLDY+
Sbjct: 1693 KLNEFWVQFQFSKLEDSICYRFKDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAVLDYV 1752
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD- 1259
IT +L+ SPG LTD+RSA VNN +A +VK+ HKH + L+ I V
Sbjct: 1753 ITRFLFQHPRQYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFVAMCPGLHHMIEKFVRL 1812
Query: 1260 SFEKLSLGSTFGWE--SVTS-------------FPKALGDIIESLAGAIFVDSGCNREVV 1304
EK G+ F E VT+ PKA+GDI ES+AGAI++DSG + +VV
Sbjct: 1813 CAEKNFSGANFNAEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSGRSLDVV 1872
Query: 1305 FQSIRPLLEPMI------TPETMRFHPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVE 1357
++ L++ I P++ P+REL E ++ FS + + +GK VTV+
Sbjct: 1873 WRVFYNLMKETIEECCNNPPKS----PIRELLELEPERARFSKLERILE--TGKVRVTVD 1926
Query: 1358 VQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+Q R T + + AK A K L+ LR
Sbjct: 1927 IQGKCRF---TGMGRSYRIAKCTAAKRALRYLR 1956
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + LF HEG LS + + +SN L
Sbjct: 1450 LLQALTMSNASDGINLERLETVGDSFLKYAVTDYLFHMNPEQHEGKLSFARSKEVSNCNL 1509
Query: 1041 CKLGCEQKLPGFIRTESFDPK-MWIIP 1066
+LG ++ LP + FDP W+ P
Sbjct: 1510 YRLGKKRNLPSLMVGAKFDPNDSWLPP 1536
>gi|261198280|ref|XP_002625542.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
gi|239595505|gb|EEQ78086.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
Length = 1522
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 304/668 (45%), Gaps = 97/668 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY-----AYLLRKPSPFVAVFLVPK 77
R YQLE E A NTI L+TGSGKTLIA++LL+ A P ++ FLV
Sbjct: 91 REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 150
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA +K + D + K+ G M D W TW + S++ ++V T ++L L S
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 210
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA I+ +FY L + N P+IFGMTASP+ +KV
Sbjct: 211 FIQMERINLLIFDEAHHAKKDHPYARIIKDFY--LQKIVVQNRPKIFGMTASPVDAKV-- 266
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLAD 255
D + LE L++S++ T ++ + L IP + Y + P LY +
Sbjct: 267 ---DVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDRLDDPSETELYKSMQS 323
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-------LALKAA 308
I +++ KI S L S LG W AL A
Sbjct: 324 RFGRI----------------------RELEKIFSFALEASSTLGRWCSDWLWTFALDEA 361
Query: 309 E------TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
E IS + QL G E I D + + S A ++ D ++
Sbjct: 362 ELPKLEGKISKSYMQSRSGNQLKGADEAI------DLLREAAQLIKSHAFYTPVDCTEH- 414
Query: 363 LDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY 421
L+ K+ L L + + D +CI+F+++ TA +L L S + +H +T
Sbjct: 415 -----LSSKVRLLSHELSMYFERHTDTKCIVFIQQRYTARLLAELFSRIGTQHM--RTGV 467
Query: 422 IAG-NNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ G + GI S ++Q + +FR+G +N + ATS+ EEGLD+ CNLVI FD + T
Sbjct: 468 LIGVRHDGIGGANFSFRQQFLTLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNST 527
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSP- 535
+ ++QSRGRAR +S Y MV+ + S +E + N MR+ E L +
Sbjct: 528 MIQYVQSRGRARHSHSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSS 587
Query: 536 ------LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCS---RLPSDG-YFKPTPKFHI 585
L+N Y F + STG T SS++++ Y S R+ + G Y +
Sbjct: 588 DDLGMILDNERYRNSFT-IHSTGAKLTYESSLAVLAHYASSLVRVSARGRYMEANISKQY 646
Query: 586 NKEMG--------------ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQI 629
+M +C LP P + + + + + L KQ+A E C L +
Sbjct: 647 ENDMSAQVNYFIERIDGAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKN 706
Query: 630 GALTDNLL 637
G L D+ +
Sbjct: 707 GLLDDHFV 714
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 209/456 (45%), Gaps = 60/456 (13%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C ++P+ + +N L R+ +Q++ ++ + PE RI + +
Sbjct: 960 CDWKQPVFRAELVRLRRNLLD--RETEQEKGEGTTYYICPEPLRI--SALPAPVAAFAFA 1015
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH---------- 995
P+I+ RL+S L+++ +ML ++ I T LEA+T + H
Sbjct: 1016 FPAIISRLESYLISLEACDML------HINIKTHLALEALTKDSDNTEEHRGEQIHFQRG 1069
Query: 996 ----LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGD FLK A S LF +N E VK+ +I N L KL
Sbjct: 1070 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYE 1129
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR-KIYVTGRKKVKSKTVADVVEALIGAF 1110
FIRT+ F + W G L G+ K + + KT+AD+ EALIGA
Sbjct: 1130 FIRTQGFSRRNWYPEGIK----------LLQGKAKSESQNKHSLGDKTIADICEALIGAS 1179
Query: 1111 LSTGGENVGLIFLDRIGIKVDFVN-----------------VPYQRQFQVHAERLVNVRH 1153
L +GG+ F + FVN +P + Q A +L +
Sbjct: 1180 LLSGGK--AHRFDSAVKAVTTFVNSDDHRASEWNCYVNLYSLPDYQIAQADAGQLDLAKQ 1237
Query: 1154 LESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
+ L Y FR P LL A TH S+ +P CYQRLEFLGD++LD + YLY++YP
Sbjct: 1238 IGDRLGYQFRYPRLLRSAFTHASFPSAWSRVP-CYQRLEFLGDSLLDMVCVEYLYHRYPD 1296
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF---EKLSLGS 1268
P +LT+ + A V+N +VK GLH+H+++ S+ L +I V+ E S S
Sbjct: 1297 RDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNNS 1356
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
W + + PK L D++E+ GAIFVDS EVV
Sbjct: 1357 PDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFKFEVV 1392
>gi|239607869|gb|EEQ84856.1| dicer-like protein [Ajellomyces dermatitidis ER-3]
Length = 1522
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 304/668 (45%), Gaps = 97/668 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY-----AYLLRKPSPFVAVFLVPK 77
R YQLE E A NTI L+TGSGKTLIA++LL+ A P ++ FLV
Sbjct: 91 REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 150
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA +K + D + K+ G M D W TW + S++ ++V T ++L L S
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 210
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ H YA I+ +FY L + N P+IFGMTASP+ +KV
Sbjct: 211 FIQMERINLLIFDEAHHAKKDHPYARIIKDFY--LQKIVVQNRPKIFGMTASPVDAKV-- 266
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLAD 255
D + LE L++S++ T ++ + L IP + Y + P LY +
Sbjct: 267 ---DVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDRLDDPSETELYKSMQS 323
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-------LALKAA 308
I +++ KI S L S LG W AL A
Sbjct: 324 RFGRI----------------------RELEKIFSFALEASSTLGRWCSDWLWTFALDEA 361
Query: 309 E------TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
E IS + QL G E I D + + S A ++ D ++
Sbjct: 362 ELPKLEGKISKSYMQSRSGNQLKGADEAI------DLLREAAQLIKSHAFYTPVDCTEH- 414
Query: 363 LDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY 421
L+ K+ L L + + D +CI+F+++ TA +L L S + +H +T
Sbjct: 415 -----LSSKVRLLSHELSMYFERHTDTKCIVFIQQRYTARLLAELFSRIGTQHM--RTGV 467
Query: 422 IAG-NNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ G + GI S ++Q + +FR+G +N + ATS+ EEGLD+ CNLVI FD + T
Sbjct: 468 LIGVRHDGIGGANFSFRQQFLTLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNST 527
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSP- 535
+ ++QSRGRAR +S Y MV+ + S +E + N MR+ E L +
Sbjct: 528 MIQYVQSRGRARHSHSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSS 587
Query: 536 ------LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCS---RLPSDG-YFKPTPKFHI 585
L+N Y F + STG T SS++++ Y S R+ + G Y +
Sbjct: 588 DDLGMILDNERYRNSFT-IHSTGAKLTYESSLAVLAHYASSLVRVSARGRYIEANISKQY 646
Query: 586 NKEMG--------------ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQI 629
+M +C LP P + + + + + L KQ+A E C L +
Sbjct: 647 ENDMSAQVNYFIERIDGAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKN 706
Query: 630 GALTDNLL 637
G L D+ +
Sbjct: 707 GLLDDHFV 714
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 209/456 (45%), Gaps = 60/456 (13%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C ++P+ + +N L R+ +Q++ ++ + PE RI + +
Sbjct: 960 CDWKQPVFRAELVRLRRNLLD--RETEQEKGEGTTYYICPEPLRI--SALPAPVAAFAFA 1015
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH---------- 995
P+I+ RL+S L+++ +ML ++ I T LEA+T + H
Sbjct: 1016 FPAIISRLESYLISLEACDML------HINIKTHLALEALTKDSDNTEEHRGEQIHFQRG 1069
Query: 996 ----LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGD FLK A S LF +N E VK+ +I N L KL
Sbjct: 1070 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYE 1129
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR-KIYVTGRKKVKSKTVADVVEALIGAF 1110
FIRT+ F + W G L G+ K + + KT+AD+ EALIGA
Sbjct: 1130 FIRTQGFSRRNWYPEGIK----------LLQGKAKSESQNKHSLGDKTIADICEALIGAS 1179
Query: 1111 LSTGGENVGLIFLDRIGIKVDFVN-----------------VPYQRQFQVHAERLVNVRH 1153
L +GG+ F + FVN +P + Q A +L +
Sbjct: 1180 LLSGGK--AHRFDSAVKAVTTFVNSDDHRASEWNCYVNLYSLPDYQIAQADAGQLDLAKQ 1237
Query: 1154 LESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
+ L Y FR P LL A TH S+ +P CYQRLEFLGD++LD + YLY++YP
Sbjct: 1238 IGDRLGYQFRYPRLLRSAFTHASFPSAWSRVP-CYQRLEFLGDSLLDMVCVEYLYHRYPD 1296
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF---EKLSLGS 1268
P +LT+ + A V+N +VK GLH+H+++ S+ L +I V+ E S S
Sbjct: 1297 RDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRYVEEIELAEADSNNS 1356
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
W + + PK L D++E+ GAIFVDS EVV
Sbjct: 1357 PDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFKFEVV 1392
>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1534
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 301/651 (46%), Gaps = 87/651 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---------KPSPFVAVF 73
R YQ+E E A QNTI L+TGSGKTLIA++LLR ++L+ KP V+ F
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLLLR---HVLQNELNDRANGKPHR-VSFF 179
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LV V L QQA ++ + D V ++G MG D WD W+E + ++ V+V T +IL
Sbjct: 180 LVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQC 239
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L S+ ++N I +LI DE HH + H YA I+ + Y + PRIFGMTASPI +
Sbjct: 240 LLNSHVRMNQINLLIFDEAHHTKKDHPYARIIRDSY---FKASPPQRPRIFGMTASPIDT 296
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
K D LETL++S++ T + ++L + S K + YD + T+L
Sbjct: 297 K-----GDIIAAATRLETLLDSRIATTSKITLLRQVV--SRPIEKVWAYDRLESPFKTNL 349
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA-----A 308
+L + ++LE + Y SELG W + +A A
Sbjct: 350 -HKLMENRFGNVKALEG-----------------VFRFAWYASSELGRWCSDRAWLYALA 391
Query: 309 ETI---------SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
+ + ES A E+ F E + K S+ +A +D
Sbjct: 392 DDVLPKLEGHVNKLAESTAAATERDMAFKEITLIKEASNIVKA-----------HTFNDP 440
Query: 360 KFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+F G L+ K+ L L + + + +CIIF ++ TA L L + L H
Sbjct: 441 EF---PGELSPKVRLLQTELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILSIPHLRPG 497
Query: 419 T--KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+G+ G+ R++ +V +FR+G +N + ATS+ EEGLD+ CNLV+ FD
Sbjct: 498 VLIGVRSGDIGGMNITFRQQFLALV-KFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLY 556
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--------EVLSH 528
T+ ++QSRGRAR +S Y MV+ +S ++RL + M+ +L
Sbjct: 557 HTLIQYVQSRGRARHYHSTYASMVEKDNSDHEARLREVREAEKTMQNFCETLPEDRILHG 616
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
L H G + V+STG T S+++++ Y S L + P + + +
Sbjct: 617 NDHDLDSLLQHEEGRRTFTVKSTGARLTYHSAIAILARYASSLQYEKETTPQATY-VVQS 675
Query: 589 MG---ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTD 634
+G +C + LP PI+ + I+ KQ+A + C L + L D
Sbjct: 676 VGNTYVCEVILPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLLRRHKLLDD 726
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 219/481 (45%), Gaps = 80/481 (16%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQK---------EPSKISFELPPELCRIIMAPIS 936
C +P+L + +N L K +++K EP KIS +PP + +A
Sbjct: 972 CHWDQPVLQAELVRLRRNLLDKLTTEEKKIQTECFICAEPLKIS-AIPPSIASTCLA--- 1027
Query: 937 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH- 995
P+I+ RL S L+++ + L ++ I + LEA+T + H
Sbjct: 1028 ---------FPAIITRLDSYLISIEACDEL------DLVIRSDYALEAVTKDSDNTEEHR 1072
Query: 996 -------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
E LE LGD FLK A S LF ++ E V + +I N L
Sbjct: 1073 GQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFN 1132
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
++++ +IR+ SF +W D + D S +K+ + + KT+ADV
Sbjct: 1133 TAKKRQIYRYIRSRSFSRHVWY--PDGLTLLQGKDHS----KKMLSQAKHALGEKTIADV 1186
Query: 1103 VEALIGAFLSTGGE----NVGL----IFLDRIGIKV----DFVNVPYQRQFQVHAERLVN 1150
EALIGA L +GG ++G+ +F+D V +++ + +QV
Sbjct: 1187 CEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAE 1246
Query: 1151 VR---HLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGDAVLDYLI 1201
+E L Y FR P LL A+TH S + +P CYQRLEFLGD++LD +
Sbjct: 1247 TNLALQVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVP----CYQRLEFLGDSLLDMVC 1302
Query: 1202 TVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF 1261
L++++P P +LT+ + A V+N +VK G HKHI S+ L +I V+
Sbjct: 1303 VEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEI 1362
Query: 1262 EKL---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV---FQS-IRPLLEP 1314
E S G+ W PK L D++E+ GAIFVDS + EV+ FQ+ I+P +
Sbjct: 1363 ETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQD 1422
Query: 1315 M 1315
M
Sbjct: 1423 M 1423
>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731
SS1]
Length = 1596
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 196/676 (28%), Positives = 309/676 (45%), Gaps = 90/676 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFLVPKVVL 80
R YQ E A + N I ++TG+GKTLIAI L++ LR P V VF+VPKV L
Sbjct: 16 RQYQTEIFTQAQQNNVIAVMDTGTGKTLIAITLIKWMTTRLRAPGEARKVVVFIVPKVPL 75
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ EAI T L+ Y+G + VD+W W +E + +VLVMTP++L D L +++
Sbjct: 76 VEQQREAIAQQTSLEARGYYGALDVDYWKREQWAKEFDEADVLVMTPRVLYDLLSHAHWS 135
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
++ I +LI DE HH R + Y IM + YH+ + P++FGMTASPI + + ++
Sbjct: 136 VDRISLLIFDEAHHCRKNNDYNQIMRDHYHK---CDPARRPKVFGMTASPIWNVKNPADS 192
Query: 201 DYWQKIHDLETLMNSKVYTCASE--------------SVLSNFIPFSTAKFKFYKY-DEI 245
+ +LE MNS+V V+ + P S + + + I
Sbjct: 193 -----LKELERNMNSRVLAVRDNIDELHKHAPKPKEIEVIYDSTPTSWLAYPYPTMINPI 247
Query: 246 PHALYTHLAD-ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
+A + D E ++ ++E++ + A+ L I S +L EL
Sbjct: 248 MNAERLVVRDSESKRFRTRYEATMESVGIIGAEYYLSAVVPRAIESLVLNKRRELSTLRK 307
Query: 305 LKAAETISCYESDFFAW-EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
L + + + + E+L+G ++++ +Q+L EW
Sbjct: 308 LLSVDDPAPGIAKINGQIEELEGIKALLVQQSAHFFAQSLEVR----PEW---------- 353
Query: 364 DSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
L +++ L E L + Y +CIIF E+ +VL +L + + +I
Sbjct: 354 ----LAPRVIRLAEILQQCYTADPACQCIIFAEQRQVVMVLSWILRHISYLRTMIRPTFI 409
Query: 423 AGNNSG----------IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
G+ +Q S K+Q V FR G N++VATS+ EEGLD Q CNLVI
Sbjct: 410 TGHGGSTHRSMRDLEDVQGMSVKEQQVAVRHFRDGKANLLVATSVAEEGLDFQPCNLVIR 469
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
FD +T+ S+ QSRGRAR + S Y++M +S T + ++ + ++ KE ++
Sbjct: 470 FDALKTMVSYAQSRGRARQKASTYIIMRRSV-PTEADKYTQFMRAEPQL-KEAYQKRAIQ 527
Query: 533 CSPLNNHMYGEDF---------YHVESTGTIATLSSSVSLIYFYCSRLP----------- 572
+++ GED + STG T ++++LI C+ LP
Sbjct: 528 DGEIDDDA-GEDVSESDLRLREVYTTSTGAKLTYGNAIALISRLCAVLPIEPGLPVLKPM 586
Query: 573 ---SDGYFKPTPKFHINKEMGIC-TLYLPNNCPI--QTVIAQG----NIKTLKQAACLEA 622
DG P+P G TL LP+ P+ + QG N + K+A +A
Sbjct: 587 YGLIDGA-SPSPDPAYPLGFGFSNTLILPSALPLPRDQLHRQGPYRQNKREAKRAVAFDA 645
Query: 623 CKKLHQIGALTDNLLP 638
+ LHQ+G D LLP
Sbjct: 646 ARSLHQLGCFDDYLLP 661
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 200/407 (49%), Gaps = 44/407 (10%)
Query: 947 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSF 1006
PS++ ++ +++ A + N+L + P + EA+ ++ + LE LGD+F
Sbjct: 952 PSLLRQITAVVRARAVINLL-----KLPPYPVPRFAEALVIPGVVPKYNYDRLEFLGDTF 1006
Query: 1007 LKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESF-DPKMWII 1065
LK A S +F Y + HEG LSV K+ + N L + + T+ PK W+
Sbjct: 1007 LKLATSIHIFNKYPHRHEGQLSVLKDGSVRNTYLRGKAYRLGIYHYNVTDKVCGPKRWMP 1066
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
P + + +G YV ++ + ++D VE+L+GA GG + GL+ R
Sbjct: 1067 P--------VTTHTTLDGVIPYV--KQTSLRRCLSDCVESLLGAGYLCGGLD-GLL---R 1112
Query: 1126 IGIKVDFV---NVPYQRQFQVHAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
G + P+ ++ + ++R L+ L Y FR+P LL+EALTH ++
Sbjct: 1113 TGTAIGLCFGGMEPWSHRYTGDSPSCGASTSLRLLQDTLGYEFRNPLLLLEALTHPTFPD 1172
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-G 1238
+ P YQRLEFLGDAV+D I YL++K+P + LT M+ V N +++ G
Sbjct: 1173 SQTP-SYQRLEFLGDAVVDVFIVDYLFHKFPACTAHKLTWMKHLIVCNSLLGAVAIRELG 1231
Query: 1239 LHKHILHASHELYKRINITVDSFEKLSLG--STFGWESVTSFPKALGDIIESLAGAIFVD 1296
L+KH+L+ + L I ++V E LS + WE PKAL D++E++ GA+ VD
Sbjct: 1232 LYKHMLYMARRLDLEITLSVRVLEPLSYQELAEKWWE--FDPPKALNDVLEAVLGAVLVD 1289
Query: 1297 SGCNREVVFQSIRPLLE-------PMITPETMRFHPVRELTEYCQKN 1336
+ + Q RP+LE P+ P+ + HPV EL + +
Sbjct: 1290 TNYD----LQLCRPVLERLFKDILPLAHPD-VPLHPVMELYMWAARK 1331
>gi|57236096|gb|AAW48725.1| dicer-2 [Aedes aegypti]
Length = 1658
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 316/1315 (24%), Positives = 559/1315 (42%), Gaps = 173/1315 (13%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVF 73
D +P R+YQ +++NTI++L TG+GKT IA+M+++ L KP F
Sbjct: 10 DFIP--RDYQRTMKTICMQKNTIIYLPTGAGKTHIALMVIKEMGKDLDKPLTEGGKRTFF 67
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
+V V L QQAE + + Y D VD W W EE +K++V+V T QILLD
Sbjct: 68 VVNTVALAKQQAEFLSHNLTYDTSIYTSDRNVDAWKQDKWLEEFAKYQVIVCTCQILLDV 127
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L+ Y + I +LI DECHH G+H IM +F L S+ PR+ G++ +
Sbjct: 128 LKHGYLSVKHINLLIFDECHHGVGEHPMHGIMEQF----LRVPKSDHPRVIGLSGMLLYK 183
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-KYDEIPHALYTH 252
++ S ++ LE N+ + T S + FST + Y + L
Sbjct: 184 QIKSVAL-VSPELERLENTFNATIATVGSYDAFTEVCKFSTDPNELLVSYSTL--RLSPV 240
Query: 253 LADELAMIELKHTRSLENLDL----NEAQAELIR-----KKVSKINSTLLYCLSELGVW- 302
+AD + I ++++E L N+ +A L K++ K+ + L+Y L + G++
Sbjct: 241 MADIVNNIN-AFSQTIEEFHLPKYLNQNKALLKDRPKPLKEIRKLFTELIYQLGDTGLFG 299
Query: 303 -----LALKAAETISCYESDF----FAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
L L + +SD A F E++ + + + SG +
Sbjct: 300 GSIALLGLIVQFELDKRQSDSSMLRLALRSCITFCESLRHQ---------IEKLMSGLDM 350
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+K S L +++ +E L E + + +IFV+R +A VL LL
Sbjct: 351 K----TKLTKFSSLKVRQLIDQLEKLYEENRDKKAKTLIFVQRRFSAKVLYHLLKIYFAE 406
Query: 414 HCTWK---TKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
++ GNN + Q S KK ++E F++ NVIV T++LEEG+D+Q
Sbjct: 407 TEDANLIVPDFMVGNNGSMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQ 466
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS---TTQSRLENYLASGNKMR 522
CN V+ +D +T S+ QS+GRARM+NS Y++M+ + + + RL Y + ++R
Sbjct: 467 MCNTVVKYDHPQTFASYQQSKGRARMKNSQYMVMLDNENRHIFLEKYRL--YKSIEEELR 524
Query: 523 KEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
+ ++ PL+ ++ E + + + G S++ L+ YC +P D +
Sbjct: 525 RCLIGKTINRPDPLDADVHKELYNEIIPPFFTAKGAKLDALSAIQLLNRYCMGMPRDAFT 584
Query: 578 KPTPKF-HINKEMG--ICTLYLPNNCPIQTVIAQG---NIKTLKQAACLEACKKLHQIGA 631
+ I+ + G I + LP ++ I+ NIK K++A AC+KL++
Sbjct: 585 NTNVTWERIDLKDGRIIVEVLLPLQSTVREKISGNPMRNIKLAKRSAAFNACRKLYENKE 644
Query: 632 LTDNLLP-DIVVEKH---DAQKRGNEPYNAE-------------HPIYFPPELVNQSPQD 674
L ++L+P D + + D R + ++A+ H I +P + PQ
Sbjct: 645 LNEHLIPIDCKYQLNNLKDVYFRHWKDFDADLGKLAGTQKCIRTHAIQYPKQTTECFPQP 704
Query: 675 TKITYHCYLIELKQHFNYDISARNIVL------------AMRTELESEIKKVNFDLEVER 722
K Y Y++ + F D + N+ + M T+ + K+ F V
Sbjct: 705 GKPCY-IYVLRIAAGFAQDPTNDNVNIFHSLYSSENNFGLMTTKPLPALAKMKF--FVTL 761
Query: 723 GRLTVNLKHLGRIQLIPN-----QVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNL 777
G + V+++ + +PN ++ L R+F +T+FR ++ L K D DN
Sbjct: 762 GLINVHIEETPIV--LPNGGSEIELALLRQFHVTVFRDVL--KLWKEFLCCD----YDNE 813
Query: 778 EIDYLLLP-STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHN 836
E +L++P +DWK + N S+ ST I K H
Sbjct: 814 ENSFLVVPLKNSTHLDWKLIREF----QNLSEPPSEIST-----IARNKMEFEADKYRHK 864
Query: 837 SLVCTPHNG--QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN 894
++ N Q Y +T V HL S F N +Y ++ + Y + + + L+
Sbjct: 865 VILPWYKNNKEQPYVVTMVHEHLTPESPFP--NPEYGSYANYFSQAYHLAVVKPDQFLIE 922
Query: 895 GRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
+ I N L+ + K + L PELC P + T +PS +
Sbjct: 923 VKGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSAL 980
Query: 951 HRLQSLLLAVNLKNMLLD----HCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSF 1006
HRL LLLA N++ L C++N TI + V K ++ LE L+ +
Sbjct: 981 HRLHYLLLAENIRVDLATGANVGCLENHTIEDVDV-----EYKERKGKQLEELQLMEFEE 1035
Query: 1007 LKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD-PKMWII 1065
+ + + + L++ + ++ +C + + LP E D + W
Sbjct: 1036 DEDEDDEFDLEEAK---RSLVAPENLSELARNQMCSITGDIPLPWQEDEEPVDIERNW-- 1090
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALI-GAFLSTGGENVGLIFLD 1124
D +L+ ++F + ++ R+K + A+ A S E + ++
Sbjct: 1091 --DQVSKLDLDYYNVFVNKFSDLSMREKAAERISTAYTSAVYRRAAGSPKREPMAIL--- 1145
Query: 1125 RIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 1184
+VP ++F + +L + +N + + +++ T S + ++
Sbjct: 1146 ---------DVPVDQKFAIKLLQLTPA----NTVNVNLQQKNIIKALTTKSSSDVFDL-- 1190
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
+R E LGDA L + I++YL + G+LT ++ V+N ++K+GL
Sbjct: 1191 --ERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKGQIVSNRNLVYCAIKYGL 1243
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 200/436 (45%), Gaps = 83/436 (19%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV + +++A+TTK + F LE E LGD+FLK++ S L K ++ HEG L+ K
Sbjct: 1167 NVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEWHEGFLTAVKG 1226
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKM-W---------------------------- 1063
+I+SN L + LPG ++ FDPK W
Sbjct: 1227 QIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIKRTMQSVNHSARVLYRL 1286
Query: 1064 ----------IIPGDNSGSY----ELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA 1109
++ NS + EL+ + ++ + KT AD +EAL+G
Sbjct: 1287 TLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMGDKTPADAMEALLGV 1346
Query: 1110 FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV-------------NVRHLES 1156
+ + G L GI NV ++ +RL N R +E
Sbjct: 1347 CVQSVGIERSFKLLPHFGILPKTHNVLRLLADKIENQRLKTHIDIREVDAFLKNYRRIEG 1406
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + P +SPG
Sbjct: 1407 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1466
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRINITV 1258
LTD+RSA VNN A V+HGLH +IL S HE+ ++N+ V
Sbjct: 1467 LTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQEQHKHEITDQVNLLV 1526
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL--EPMI 1316
+ ++ PKALGD+ ESL A+F+DSG + +Q I ++ E +
Sbjct: 1527 EESDR-------KMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGMMGNEILT 1579
Query: 1317 TPETMRFHPVRELTEY 1332
E VR+L E+
Sbjct: 1580 FTENTPIQIVRQLYEF 1595
>gi|168046558|ref|XP_001775740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672892|gb|EDQ59423.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 792
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 200/739 (27%), Positives = 344/739 (46%), Gaps = 78/739 (10%)
Query: 695 SARNIVLAMRTELESEIKKVNFDLEVER-GRLTVNLKHLGRIQLIPNQVLLCRRFQITLF 753
SA +L L+ E+ ++ L + + L + G + + P +V ++F I LF
Sbjct: 74 SASEFLLLSPQLLDEEVSSISVHLNLPAFAAVDSKLNYCGVLNVSPEKVETVKKFNIWLF 133
Query: 754 RVIMDH--NLDKLN-EILDGFELRDNLEIDYLLLPSTGQLIDWKTV-----ATVLFPRDN 805
+ M L K++ E + + I +PS +L+DW V +++L+ R
Sbjct: 134 HLAMGKCFALPKVSGEGKKNYYVLPCKPITGDTVPSPEELVDWHVVEIAITSSLLYRRKV 193
Query: 806 ---GSKHNMNCSTM-----FNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHL 857
G ++C + + ++G + +++V +NG ++G+L L
Sbjct: 194 PFFGGYATLDCQNTQSNEALDGGGLRMRNGIFQEHDLEDAVVTCANNGLPCFVSGILHDL 253
Query: 858 NANSLFTRNNG-SVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEP 916
+ +S +++ G +Y +Y +L + +PLL G R+ NY+ + +
Sbjct: 254 SGSSFCSQSAGRKQISYSDYYFHECKYKLEYPDQPLLKGYRLVRAGNYVRRTSAVSNGDS 313
Query: 917 SKI--SFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 974
K + ELPPE+C I+ + +PSI+H L+ L+A L+N N+
Sbjct: 314 VKPWETMELPPEVC-ILHVGLKGKLCRGGMRLPSILHSLEMSLVAAELRN--------NI 364
Query: 975 TIP--TIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
P KV EA+T+ C+ + E+LE LGDS L + ++ + + LL +
Sbjct: 365 GSPLSCFKVQEALTSGACEGNHSYETLELLGDSVLNFIGGVHMYIDFPSCTSELLHSYRH 424
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK 1092
++SN L K G LPG+I E + K W+ PG + E +G+ I +
Sbjct: 425 DLVSNRNLYKCGLACGLPGYIFAELLNTKTWVPPGP---ALEDLPQKSPDGQVIGL---- 477
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-NVPYQRQFQVHAERLVNV 1151
KT+ADVVEALIG G N + + + + + F +P + L+
Sbjct: 478 ----KTLADVVEALIGVTFLHGDLNSAVKTMVWLQVPIPFPEKIP--EVIIADIQELMEA 531
Query: 1152 RH---------LESLLNYSFRDPSLLVEALTHG---SYMLPEIPRC---YQRLEFLGDAV 1196
R+ LE + Y F+ SLL+ A +G ++ +PR +QRLEFLGD+V
Sbjct: 532 RNTFKDHDIVTLEKKIGYQFKCKSLLLSAFDYGDEVTFTQSGVPRGSFQFQRLEFLGDSV 591
Query: 1197 LDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
LD+LI + Y +P L D+R A+VN++ +A ++++HG H ++ S L I +
Sbjct: 592 LDFLIMRHFVQLYSAFNPEQLNDLRQATVNSENFACTAIRHGFHHYLKRMSPILRDEIEL 651
Query: 1257 TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
S + GS FG S S PKA+GD++++LAG+I +DS + ++V++ ++PLL P+
Sbjct: 652 YAASVHREG-GSPFGIPSRAS-PKAIGDLMQTLAGSILLDSNFDHDLVWKVLKPLLSPLA 709
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQ------ANGRLFEHTFL 1370
TP+T+ HP R L C K ++ I + AV V AN + +E T
Sbjct: 710 TPKTVMRHPRRLLEALCHKQDLKLE---LQTIQLEGAVEARVYINQICVANSKHYEPT-- 764
Query: 1371 DADKKTAKKVACKEVLKSL 1389
A+++A +SL
Sbjct: 765 -----VARRLAAFTAFRSL 778
>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
Length = 1463
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 199/675 (29%), Positives = 324/675 (48%), Gaps = 82/675 (12%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL---LRKPSP 68
E+VS LP R YQ E A + N I L+TGSGKT I+ +L++ + LRK
Sbjct: 6 EDVSDALLP--RRYQEEIFARAQRGNVIAALDTGSGKTYISTLLIKWISARHIGLRK--- 60
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
+ VFLVPKV LV QQ + I T L+V K G VD D WK+E+ + +VLVMT Q
Sbjct: 61 -IIVFLVPKVALVDQQGDFIAKQTPLRVIKCCGATAVDLSDRQGWKKELDRADVLVMTAQ 119
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L+ L S++ L+ + +++ DECHH R H Y IM E++ + + P+IFGMTA
Sbjct: 120 IFLNLLTHSHWSLDKVSLMVFDECHHTRKNHAYNGIMREYF----QCPTQDRPKIFGMTA 175
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
SPI + +D + + LE +++KV I + + P
Sbjct: 176 SPIWNP-----KDAVESLATLERNLDAKV------------IAVRQHVGELMDHSPKPQE 218
Query: 249 LYTHLADELAMIELKHTRSL-ENLDLNEAQAEL------IRKKVSKINSTLLYCLSELGV 301
L L + T +L E ++L + + IR + ++L +EL +
Sbjct: 219 LLHEYPPPLQSYPVYPTPTLWERMNLQQLPPNIGIPIDKIRTRYEVTYASLGPFGAELYL 278
Query: 302 WLALKAAET-----ISCYESDFFAWEQLD-GFGETIIKKFGS--------DASQALVTYV 347
+ +K T IS + D+ + D G++++ D ALV Y
Sbjct: 279 YNDIKQRITQIFQQISGVDIDYLSVGYADTAGGDSVVPNLPDVELPAELEDLQDALVEYR 338
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
+ S + + + K+ LI+ L + + I+FVE+ A L ++L
Sbjct: 339 SFFEDDSNSNSVPLTVHLKWCSPKVRELIDILFGHY-TSTFQGIVFVEQRHVAACLATML 397
Query: 408 SELLPRHCTWKTKYIAGNNSGIQCQSR------KKQNEIVEEFRRGLVNVIVATSILEEG 461
S + K++ + G+ + +S+ K Q +IV+ FR +N+++ATS+ EEG
Sbjct: 398 SRVPQLSHLIKSEQLIGHGASTLAKSQMKGMALKTQQDIVKMFRERKINLLIATSVAEEG 457
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
LD +C+LVI FDP + + ++QSRGRAR ++S +++MV+ G + +R +++ S ++
Sbjct: 458 LDFPACDLVIRFDPLQHMVGYLQSRGRARHRSSKFIIMVQQGHTVHTARYKSFSESEPQL 517
Query: 522 -----RKEVLSHASLPCSPLNNHMYGEDF-----YHVESTGTIATLSSSVSLIYFYCSRL 571
R+++ +H P + D Y V STG I T +S+++L+ CS +
Sbjct: 518 RVVYQRRDIEAH--FPDEEEEEQAHPADLAERERYVVPSTGAILTYNSAIALLNHLCSLI 575
Query: 572 PSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQ----TVIA--QGNIKTLKQAACLEAC 623
P D F PT H+ + G TL LP + P+ T + + + K K+A A
Sbjct: 576 PHDK-FTPT---HLPRYTGDFSSTLQLPMSLPLPQEDLTYVGPNRRSKKEAKRAVAFVAV 631
Query: 624 KKLHQIGALTDNLLP 638
++LH +G D LLP
Sbjct: 632 QRLHLLGVFDDYLLP 646
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 238/522 (45%), Gaps = 63/522 (12%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGS----VTTYKKHYEERYGIQ--------- 884
++C+ G+ Y + + + + L T GS +TYK+++++++ +
Sbjct: 806 VMCSREPGRPYLLRKI--RTDISPLSTPPPGSREAAFSTYKEYWQDKFSRKGTTFEVPET 863
Query: 885 -LCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSF 943
C + +P L + + + P + F P LCR A IS F +F
Sbjct: 864 GPCVELQPYLRHTSCVYSLDNGDGAQGAPMTVPLVVLF--PLSLCR--RAEISEDVFRAF 919
Query: 944 TFVPSIMHRLQSLLLA------VNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLE 997
+P + HR+ + A + L ++ D +Q +T+P+ F+ +
Sbjct: 920 HVLPELCHRITDVYRAHTARIELGLPPIVDDLLVQALTLPS-----------ANAGFNNQ 968
Query: 998 SLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTES 1057
LETLGDS LK A LF Y + HEG L V + +SN L E L ++ +E
Sbjct: 969 RLETLGDSVLKLATVVYLFNKYPHRHEGQLDVLRRNSVSNRTLLARAKEVGLEQYLSSEP 1028
Query: 1058 FDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
++W L D LF + YV + +++ D +EAL+GA GG
Sbjct: 1029 QSVRLWRYTA-------LPDRDLFEPYR-YVP--RVFPRRSLQDCMEALLGAAFVAGGIP 1078
Query: 1118 VGLIFLDRIGIKVDFVNVPYQRQFQVH-AERLVNV--RHLESLLNYSFRDPSLLVEALTH 1174
+ L +G+ +P+ ++ AE V V L+ L Y FR LL+EA+TH
Sbjct: 1079 MALRAGTALGLSFGG-PLPWNARYGGQIAESPVTVLFTDLQDTLGYRFRCGKLLLEAVTH 1137
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
S+ E YQRLEFLGDA++D + YLYNK+P + G L+ RS +V A +
Sbjct: 1138 PSFGAAET-SSYQRLEFLGDALIDLTVMRYLYNKFPEATSGQLSWARSRAVCAPALASVA 1196
Query: 1235 VKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTF--GWESVTSFPKALGDIIESLAG 1291
VK GL K +L + EL + + E LS GW+ PKA+ D++ES+ G
Sbjct: 1197 VKRLGLQKLLLVNNVELSIAMGKCIPILESLSEEEIILSGWKQ--DPPKAMSDVLESVLG 1254
Query: 1292 AIFVDSGCNRE----VVFQSIRPLLEPMITPETMRFHPVREL 1329
A+FVD N E + Q + LLE ++TPE R PV L
Sbjct: 1255 AVFVDLDFNFEKASSIAEQVLNDLLE-VLTPELPR-DPVSNL 1294
>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
bisporus H97]
Length = 1717
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 186/683 (27%), Positives = 310/683 (45%), Gaps = 120/683 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E E A K+N I L TGSGKTLI ++L++ + L + +FLVP+V LV
Sbjct: 17 RKYQEEIFERAQKENVITALNTGSGKTLIGLLLIK-WMSALESSGDKLIIFLVPRVALVE 75
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA+ ++ +T L+ K +G + + D WK+++ K +V+VMTPQIL++ + S + L
Sbjct: 76 QQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTPQILVNFITHSIWSLR 135
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +L+ DECHHAR H Y IM E+++ + E D P+IFGMTASP+ + +D
Sbjct: 136 QIALLVFDECHHARKNHPYNIIMQEYFY-IKEVEDR--PKIFGMTASPVWNT-----KDP 187
Query: 203 WQKIHDLETLMNSKVYTC-----------ASESVLSNFIPFSTAKFKFYKYD------EI 245
+ LET ++S + + S L P + F+ + I
Sbjct: 188 VGSLLTLETNLDSVIISVREHVDELAVHTPRPSELITIFPAPPDNYDFHDPNFLRCLSVI 247
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL 305
A + HL + + ++H +L NL YC S ++L L
Sbjct: 248 SPATWEHLEVAWSSLVMRHDATLYNLG--------------------PYCAS---LFLYL 284
Query: 306 KAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS 365
+ + ++ E D +V YV + + NL
Sbjct: 285 EVRHVLKSVQTGLRTIE---------------DTKMEVVEYVAGASAPKRNPPEELNLIR 329
Query: 366 GLL-------------------------TEKIVCLIESLLEYRGVEDIRCIIFVERVITA 400
+L + K+ L LLE+ + + I+FVE+ A
Sbjct: 330 DILLDFEGFFWRNDCPNRVPIPVPLKWCSPKVDALKRILLEFY-TPNFQVIVFVEQRQVA 388
Query: 401 IVLQSLLSELLPRHCTWKTKYIAG---NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSI 457
L +L + ++ ++ G N+ G+ + + ++ FR+G VNV++ATS+
Sbjct: 389 ACLSKILPVIPGLEGKIRSAHLVGQGVNSDGVSKATDTYHGDAIQAFRKGEVNVLIATSV 448
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLAS 517
EEGLD +C+LV+ FDP R + ++QSRGRAR +S +++M++ D + +N LA
Sbjct: 449 AEEGLDFPACDLVVRFDPFRHMVGYVQSRGRARNADSRFIVMIRQDDQVSFEFYQNLLAQ 508
Query: 518 GNKMRKEV----LSHASLPC-----------SPLNNHMYGEDFYHVESTGTIATLSSSVS 562
+M K + ++P +PL+ + + Y V ST + + S++
Sbjct: 509 EPEMNKAYQGRQRAAVTMPAQQEDEDEEEDLNPLD--LASRERYVVPSTEAVLSYDSAIG 566
Query: 563 LIYFYCSRLPSDGYFKP-TPKFHINKEMGICTLYLPNNCPIQ------TVIAQGNIKTLK 615
L+ + C+ +P D Y P PKF + + T+ LP + P+ T + + K K
Sbjct: 567 LLNYLCALIPCDAYTPPHKPKFTGDFQ---STVQLPLSIPLPPDQLTYTGPLKCSKKEAK 623
Query: 616 QAACLEACKKLHQIGALTDNLLP 638
+A A K+LH++ LLP
Sbjct: 624 RAVAFLAVKRLHELDIFDQYLLP 646
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 230/517 (44%), Gaps = 71/517 (13%)
Query: 921 FELPPELCRIIMAPISLS--TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 978
F++PP + + +S F +P++ H++ A + + N+ +P
Sbjct: 910 FKVPPIVPMNTCGWVDMSPDVIRGFEILPTLCHKITDAYRAQSTR--------LNIGLPF 961
Query: 979 IK---VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERII 1035
I ++EA+T DF + LETLGD+ L + L Y HEG LS + +
Sbjct: 962 IPDDLLMEALTLPNVDADFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGRV 1021
Query: 1036 SNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
SN L +L FI +E + W P YE+ + RK + ++++
Sbjct: 1022 SNKFLVSCARTVELERFISSEKMGVEKW--PFVEQKGYEVKE---IRNRK---SVKRQIP 1073
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGI--KVDFVNV-PYQRQFQVHAERLVN-- 1150
+ + D VEAL+GA GG + L R G+ + F + P+ + + R +
Sbjct: 1074 RRGLQDCVEALLGASFLAGGIPMAL----RTGVCFGLSFGGIQPWGERCRRAEAREIGVP 1129
Query: 1151 --VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
V LE + Y F +P LLVEA+TH S P YQRLEFLGD+V+ L+T YLY+K
Sbjct: 1130 ALVAGLEKEIGYVFENPELLVEAVTHPSLEFSSTP-SYQRLEFLGDSVIKMLVTEYLYHK 1188
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSV-KHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
+P + L R+ ++ + A ++ K +HK++L S +L IN+ V E +
Sbjct: 1189 FPKATSHQLALPRTKAICSPALAHIAIRKLHIHKYLLQNSIDLNNAINLYVPVLESATAD 1248
Query: 1268 STF--GWESVTSFPKALGDIIESLAGAIFVDSGCNRE----VVFQSIRPLLEPMITPETM 1321
GW PKA+ D ES+ GA+FVD G + + +V + + +LE ++ P
Sbjct: 1249 EIVRRGWR--YDPPKAISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILE-VLNPSIP 1305
Query: 1322 RFHPVRELTEY-----CQKNH---------------------FSMKKPVASRISGKAAVT 1355
+ PV E+ E+ C K H F ++ R +G+A +
Sbjct: 1306 K-DPVSEVLEWLASVGCSKGHNLKFKCVKTFKLIICTHEEFIFLFRRNTEER-NGQAVES 1363
Query: 1356 VEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
V +G++ + K ++ + +LRAS
Sbjct: 1364 VSAVFHGQIVAGPIVSNSKAVSRFAVAERAFMALRAS 1400
>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1430
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 186/668 (27%), Positives = 314/668 (47%), Gaps = 90/668 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E E A K+N I L TGSGKTLI ++L++ + L + +FLVP+V LV
Sbjct: 17 RKYQEEIFERAQKENVITALNTGSGKTLIGLLLIK-WMSALESSGDKLIIFLVPRVALVE 75
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA+ ++ +T L+ K +G + + D WK+++ K +V+VMTPQIL++ + S + L
Sbjct: 76 QQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTPQILVNFITHSIWSLR 135
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +L+ DECHHAR H Y IM E+++ + E D P+IFGMTASP+ + +D
Sbjct: 136 QIALLVFDECHHARKNHPYNIIMQEYFY-IKEVEDR--PKIFGMTASPVWNT-----KDP 187
Query: 203 WQKIHDLETLMNSKVYTCASESV--LSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI 260
+ LET ++S V E V L+ P + + P H + L +
Sbjct: 188 VGSLLTLETNLDS-VIISVREHVDELAVHTPRPSELITIFPAP--PDNYDFHDPNVLRCL 244
Query: 261 ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFA 320
+ + E+L++ A L+ + + + + YC S ++L L+ + ++
Sbjct: 245 SIISPATWEHLEV--AWPSLVMRHDATLYNLGPYCAS---LFLYLEVRHVLKSVQTGLRT 299
Query: 321 WEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLL------------ 368
E D +V YV + + NL +L
Sbjct: 300 IE---------------DTKMEVVEYVAGASAPKRNPPEELNLIRDILLDFEGFFWRNDC 344
Query: 369 -------------TEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+ K+ L LLE+ + + I+FVE+ A L +L +
Sbjct: 345 PNRVPIPVPLKWCSPKVDALKHILLEFY-TPNFQVIVFVEQRQVAACLSKILPVIPGLEG 403
Query: 416 TWKTKYIAG---NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
++ ++ G N+ G+ + + ++ FR+G VNV++ATS+ EEGLD +C+LV+
Sbjct: 404 KIRSAHLVGQGVNSDGVSKATDTYHGDAIQAFRKGEVNVLIATSVAEEGLDFPACDLVVR 463
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV----LSH 528
FDP R + ++QSRGRAR +S +++M++ D + +N LA +M K +
Sbjct: 464 FDPFRHMVGYVQSRGRARNADSRFIVMIRQDDQVSFEFYQNLLAQEPEMNKAYQGRQRAA 523
Query: 529 ASLPC-----------SPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
++P +PL+ + + Y V ST + + S++ L+ + C+ +P D Y
Sbjct: 524 VTMPAQQEDEDEEDDLNPLD--LASRERYVVPSTEAVLSYDSAIGLLNYLCALIPCDAYT 581
Query: 578 KP-TPKFHINKEMGICTLYLPNNCPIQ------TVIAQGNIKTLKQAACLEACKKLHQIG 630
P PKF + + T+ LP + P+ T + + K K+A A K+LH++
Sbjct: 582 PPHKPKFTGDFQ---STVQLPLSIPLPPDQLTYTGPLKCSKKEAKRAVSFLAVKRLHELD 638
Query: 631 ALTDNLLP 638
LLP
Sbjct: 639 IFDQYLLP 646
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 223/481 (46%), Gaps = 49/481 (10%)
Query: 935 ISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK---VLEAITTKKCQ 991
+S +F +P++ H++ A + + N+ +P I ++EA+T
Sbjct: 926 MSPDVIRAFEILPTLCHKITDAYRAQSTR--------LNIGLPFIPDDLLMEALTLPNVD 977
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
DF + LETLGD+ L + L Y HEG LS + +SN L +L
Sbjct: 978 ADFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSNKFLVSCARTVELER 1037
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFL 1111
FI +E + W P YE + RK + ++++ + + D VEAL+GA
Sbjct: 1038 FISSEKMGVEKW--PFVEQKGYEAKE---IRDRK---SVKRQIPRRGLQDCVEALLGASF 1089
Query: 1112 STGGENVGLIFLDRIGI--KVDFVNV-PYQRQFQVHAERLVN----VRHLESLLNYSFRD 1164
GG + L R G+ + F + P+ + + R + V LE + Y F +
Sbjct: 1090 LAGGIPMAL----RTGVCFGLSFGGIQPWGERCRRAEAREIGVPALVAGLEKEIGYVFEN 1145
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
P LLVEA+TH S P YQRLEFLGD+V+ L+T YL++K+P + L R+ +
Sbjct: 1146 PELLVEAVTHPSLEFSSTP-SYQRLEFLGDSVIKMLVTEYLFHKFPKATSHQLALPRTKA 1204
Query: 1225 VNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTF--GWESVTSFPKA 1281
+ + A +++ +HK++L S +L IN+ V E + GW PKA
Sbjct: 1205 ICSPALAHIAIRKIHIHKYLLQNSIDLNNAINLYVPVLESATADEIVRRGWR--YDPPKA 1262
Query: 1282 LGDIIESLAGAIFVDSGCNRE----VVFQSIRPLLEPMITPETMRFHPVRELTEY----- 1332
+ D ES+ GA+FVD G + + +V + + +LE ++ P + PV E+ E+
Sbjct: 1263 ISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILE-VLNPSIPK-DPVSEVLEWLASVG 1320
Query: 1333 CQKNH-FSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
C K H K+ R +G+A +V +G++ + K ++ A + +LRA
Sbjct: 1321 CSKGHNLKFKRSTEER-NGQAVESVSAVFHGQIVAGPIVSNSKAVSRFTAAERAFMALRA 1379
Query: 1392 S 1392
S
Sbjct: 1380 S 1380
>gi|348544424|ref|XP_003459681.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Oreochromis niloticus]
Length = 1917
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 217/715 (30%), Positives = 324/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
+E D + R YQ+E LE AL++NTIV L TGSGKT IA++L + ++ +R P A
Sbjct: 35 QEAIHDNIYTPRKYQVELLEAALERNTIVCLNTGSGKTFIAVLLTKELSHQIRGPYQENA 94
Query: 72 ---VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQA A++ H+DL VG+Y W W E+ +++VLVMT
Sbjct: 95 KRTVFLVNTASSVVQQAAAVRTHSDLSVGEYTDLEETLAWTDQRWSREIIENQVLVMTCH 154
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L L+ L+ I +++ D+CH A H Y IM F G S PRI G+TA
Sbjct: 155 IFLHVLKNKILPLSKINLVVFDDCHLAITDHPYCQIMKLF------EGCSCTPRILGLTA 208
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K SE + QKI +LE ++ S T VL + ++ + D +
Sbjct: 209 SILNGKCDPSELE--QKIQNLERILKSNAETATDLVVLDRY----ASQPREVVLDCGSYV 262
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC---LSELGVWLAL 305
+ L+ L EL N D N + + R L C L LG W A
Sbjct: 263 DKSGLSSRL-QAELNEALHFLN-DCNISVVKEDRDPTFISKQVLNDCRAVLQVLGPWCAD 320
Query: 306 KAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
KAA + + EQ + F +TI++K + + S
Sbjct: 321 KAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHF---------------S 365
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVE--------------------------------- 386
LD +T K++ L+E L EY+ E
Sbjct: 366 PACLDLKFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEV 425
Query: 387 ---------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNS 427
+I C IIFVER TA+VL L+ E P + +I G++
Sbjct: 426 EAKERPEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSI 485
Query: 428 GIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
G + Q+R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 486 G-KNQARNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEY 544
Query: 480 CSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSHASL 531
S++QS+GRAR S+Y+++ +G D +T +E L NK K V +S +
Sbjct: 545 RSYVQSKGRARAPVSNYIMLADTGRTKAFEEDLSTYKAIEKILR--NKCSKSVEVSEFEV 602
Query: 532 PCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG- 590
++++ E G T+++++ I YC+RLPSD + PK EMG
Sbjct: 603 EQVMDDDNILPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCK-TVEMGD 661
Query: 591 ---ICTLYLPNNCPIQTVIAQGNI----KTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ V +G + + ++A L C+KLH+IG L D+L+P
Sbjct: 662 GYFQSTLYLPINSPLR-VPVKGPVMNCARLAEKAVALVCCEKLHKIGELDDHLMP 715
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 175/355 (49%), Gaps = 68/355 (19%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ------FQVH--- 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV +P +R QVH
Sbjct: 1572 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKV----LPLERGTLTGAVAQVHTHT 1627
Query: 1145 ----------------------AERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSY 1177
AER +N + E +NY+F++ + L++A TH SY
Sbjct: 1628 QVADLCYGWLKIPPRCMLDHPDAERTLNHLISGFENFEKKINYTFKNKAYLLQAFTHASY 1687
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+
Sbjct: 1688 HYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKY 1747
Query: 1238 GLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-------------VTSFPKAL 1282
HK+ S EL+ +D F + L G +S PKA+
Sbjct: 1748 DYHKYFKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAM 1803
Query: 1283 GDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFS 1339
GDI ESLAGAI++DS + E V+Q P++ P+I + PVREL E + FS
Sbjct: 1804 GDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS 1863
Query: 1340 MKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
P GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1864 ---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1912
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1291 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1350
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG----------DNSGSYELNDDSLFNGR 1084
+LG ++ LP + FDP + W+ PG D S E ++ L NGR
Sbjct: 1351 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDRLNSEEAKEELLANGR 1405
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1307 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1347
>gi|238814324|ref|NP_001154925.1| endoribonuclease Dicer [Danio rerio]
gi|229485378|sp|Q6TV19.2|DICER_DANRE RecName: Full=Endoribonuclease Dicer
Length = 1865
Score = 227 bits (578), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 205/708 (28%), Positives = 319/708 (45%), Gaps = 112/708 (15%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
+E D + R YQ+E LE AL+ NTIV L TGSGKT IA++L++ ++ +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGENGKRT 83
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFLV V QQA ++ H+DL+VG Y + + W W EM +++VLVMT I L
Sbjct: 84 VFLVNAASSVAQQASTVRTHSDLQVGDYMSE-DMTSWPEEMWNREMIENQVLVMTCHIFL 142
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
L+ L+ I +L+ DECH A H Y IM ++ E G + PRI G+TAS +
Sbjct: 143 HVLKNGVLPLSKINLLVFDECHLAITGHPYREIM-----KICE-GCPSCPRILGLTASIL 196
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYT 251
K D +KI +LE ++ S T VL + + + L
Sbjct: 197 NGKCDPC--DLEEKIQNLEKILQSNAETATDLVVLDRYASQPREEVLDCGQYQDQSGLSE 254
Query: 252 HLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSELGVWLALKAAET 310
L +EL + L + +L+ + + +SK + + L+ LG W A KAA
Sbjct: 255 RLLNELD----EALNFLNDCNLSVHREDRDPTFISKQVLNDCRAVLTVLGPWCADKAAGI 310
Query: 311 ISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD 364
+ + EQ + F +TI++K + + S +LD
Sbjct: 311 MVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHF---------------SPASLD 355
Query: 365 SGLLTEKIVCLIESLLEYRGVE-------------------------------------- 386
+T K++ L+E L EY+ E
Sbjct: 356 LKFVTPKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEK 415
Query: 387 ----------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQ 432
+I C IIFVER TA+VL L+ E P + +I G++ G + Q
Sbjct: 416 TEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG-KNQ 474
Query: 433 SR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++Q
Sbjct: 475 PRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQ 534
Query: 485 SRGRARMQNSDYLLMVKSGDSTT-QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
S+GRAR S+Y+++ S + T Q L+ Y A +R + A C+ +
Sbjct: 535 SKGRARAPVSNYIMLADSERTKTFQEDLKTYKAIEKILRNKCSKSAE--CNDFELEPVTD 592
Query: 544 D-------FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK---FHINKEMGICT 593
D E G T+++++ + YC+RLPSD + PK +N T
Sbjct: 593 DDNVLPPYVLRSEDGGPRVTMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRST 652
Query: 594 LYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
L+LP N P++ + + ++A L C+KLH+IG L D+L+P
Sbjct: 653 LFLPINSPLRVPVTGPVMNCARLAEKAVALLCCEKLHKIGELDDHLMP 700
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 177/341 (51%), Gaps = 50/341 (14%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 1137
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 1530 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 1589
Query: 1138 QRQFQ-VHAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
+ F+ AER +N + ES +NY+F++ + L++A TH SY I CYQRLEF
Sbjct: 1590 RCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1649
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1650 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1709
Query: 1252 KRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDIIESLAGAIFVD 1296
+D F + L G +S PKA+GDI ESLAGAI++D
Sbjct: 1710 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1765
Query: 1297 SGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAA 1353
SG + E V+Q P++ P+I + PVREL E + FS P GK
Sbjct: 1766 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVR 1822
Query: 1354 VTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1823 VTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1860
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1279 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1338
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDD---SLFNGR 1084
+LG ++ LP + FDP + W+ PG D S + + + D L NG+
Sbjct: 1339 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKWDSDENKDLANGK 1391
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1295 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1335
>gi|449280710|gb|EMC87946.1| Endoribonuclease Dicer [Columba livia]
Length = 1922
Score = 227 bits (578), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 210/714 (29%), Positives = 320/714 (44%), Gaps = 120/714 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y ++ W W +E SKH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEVIESWTKEKWSQEFSKHQVLVMTCH 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L LR Y L+ I +L+ DECH A H Y IM ++ E G + PRI G+TA
Sbjct: 154 VALTVLRNEYLSLSNINLLVFDECHLAIQDHAYREIM-----KICE-GYPSCPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K +E + +KI LE ++ S T VL + T++ D P+
Sbjct: 208 SILNGKCDPAELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPYT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L L + EL + N D N E + LI K +I S L LG W
Sbjct: 262 DKSGLYGRL-LKELDEALTFLN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEV---LSHASLP 532
S++QS+GRAR S+Y+++ + + + L+ Y A +R + + +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETE 600
Query: 533 CSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINK 587
P+ ++ ++ + T+++++ I YC+RLPSD + PK +
Sbjct: 601 TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD 660
Query: 588 EMGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I + + A L C+KLH+IG L D+L+P
Sbjct: 661 HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 176/374 (47%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 1132
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGALCATRENCNSE 1613
Query: 1133 ----------------------------VNVPYQRQF-QVHAERLVN-----VRHLESLL 1158
+ +P + F AE+ +N + E +
Sbjct: 1614 QKNPSPNSFSASVANSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1673
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1674 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1733
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1734 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1789
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1790 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1849
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1850 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1903
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1904 AARRALRSLKANQP 1917
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1386
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1295 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1347
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1348 MRSKKVSN 1355
>gi|148686840|gb|EDL18787.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 1916
Score = 227 bits (578), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 328/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 152
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 153 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 206
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 207 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 260
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 261 TDRSGLYERLLM-ELEAALDFIN-DCNVAVHSKERDSTLISK---QILSDCRAVLVVLGP 315
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 316 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 363
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 420
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 421 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 480
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 481 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 541 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 600
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 601 VHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 659
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 660 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 714
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 173/373 (46%), Gaps = 83/373 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1609
Query: 1128 ---------------------IKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLN 1159
++ + +P + F H + + HL E +N
Sbjct: 1610 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFD-HPDAEKTLNHLISGFETFEKKIN 1668
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1669 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1728
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1729 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELR 1784
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1785 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVP 1844
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1845 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1898
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1899 ARRALRSLKANQP 1911
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1402
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|257051057|sp|Q8R418.3|DICER_MOUSE RecName: Full=Endoribonuclease Dicer; AltName:
Full=Double-strand-specific ribonuclease mDCR-1
Length = 1916
Score = 227 bits (578), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 328/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 152
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 153 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 206
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 207 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 260
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 261 TDRSGLYERLLM-ELEAALDFIN-DCNVAVHSKERDSTLISK---QILSDCRAVLVVLGP 315
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 316 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 363
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 420
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 421 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 480
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 481 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 541 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 600
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 601 VHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 659
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 660 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 714
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 173/373 (46%), Gaps = 83/373 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1609
Query: 1128 ---------------------IKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLN 1159
++ + +P + F H + + HL E +N
Sbjct: 1610 QKSLSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFD-HPDAEKTLNHLISGFETFEKKIN 1668
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1669 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1728
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1729 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELR 1784
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1785 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVP 1844
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1845 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1898
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1899 ARRALRSLKANQP 1911
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1402
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|19072786|gb|AAL84638.1|AF484524_1 endoribonuclease Dicer [Mus musculus x Mus spretus]
Length = 1539
Score = 227 bits (578), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 328/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 18 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 77
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 78 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 136
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 137 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 190
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 191 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 244
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 245 TDRSGLYERLLM-ELEAALDFIN-DCNVAVHSKERDSTLISK---QILSDCRAVLVVLGP 299
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 300 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 347
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 348 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 404
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 405 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 464
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 465 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 524
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 525 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 584
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 585 VHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 643
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 644 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 698
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1281 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYHDAHEGRLSYMRSKKVSNCNL 1340
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1341 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1386
>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1427
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 309/670 (46%), Gaps = 85/670 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP--FVAVFLVPKVV 79
AR YQ E A + N I L+TGSGKT IA+ L++ ++ +P P V VFL PK
Sbjct: 16 ARRYQEEIFVAAQQGNIIAVLDTGSGKTFIAVQLIK---WVTAQPCPERKVVVFLAPKRP 72
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVD-----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
LV QQA I+ L Y GDM VD WD W++E +K +VLVMTPQILLD L
Sbjct: 73 LVMQQALFIQSQVPLNTQYYLGDMTVDDKKVELWDREQWRKEFTKRDVLVMTPQILLDLL 132
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
++++++ I +L+ DE HHA+GKH Y+ I+ +F L G P+IFGMTASP
Sbjct: 133 THAHWQMSKISLLVFDEAHHAQGKHPYSQILKQFVS-TLPVG--KRPKIFGMTASPTWDA 189
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESV-LSNFIPFSTAKFKFYKYDEIPHALYTHL 253
+ +Q + LE+ MN+++ V LS + S K Y Y Y
Sbjct: 190 KRAQKQ-----LDALESTMNARIIAVKEHQVELSKHV--SRPKELVYLYQS-----YDPS 237
Query: 254 ADELAMIELKHTRSLENLDLNEAQ-----------AELIRKKV---SKINSTLLYCLSEL 299
E ++ +LE+ L+ + L+ K V SK+ + L L
Sbjct: 238 RRETYGLDDTEAAALEDAPLSPGDVPTVPGVWDVLSPLLEKDVPDFSKLKTRRDVLLDSL 297
Query: 300 GVWLALKAAETISCYESDFFAWEQLDGFGETIIK---------KFGSDASQALVTYVPSG 350
G + AAE + A + LD + I K D L ++
Sbjct: 298 GPY----AAELFAHRYFTALAGKLLDAARKAAISATAKSLARVKRLEDLHARLAAFLSGF 353
Query: 351 AEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL 410
I D L++ K+ L + L E E +C+IFVE+ A+ L LL L
Sbjct: 354 VPGEIPD--------ALVSPKLRLLGDVLCENHD-EHFKCVIFVEQKHIAMTLAELLPRL 404
Query: 411 LPRHCTWKTKYIAGNNSG---IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
I + +G I K+Q E+V+ FR NV++ATS+ EEGLD Q+C
Sbjct: 405 SELDWVSPAALIGHSTTGETDIGGMDSKQQAEVVKGFRASKYNVLLATSVAEEGLDFQAC 464
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS 527
+LVI FD + + S++QSRGRAR NS Y++++ D ++ E + +R++ +
Sbjct: 465 HLVIRFDGLQNLISYVQSRGRARHANSTYVVLLPRDDPLALTKYEGMRDAEPLLREQYAA 524
Query: 528 H-ASLPCSPLNN------HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
A+ PL+ + + Y V STG T +++ L+ C+ PSD Y
Sbjct: 525 FTAAESVEPLDTDEPSAADLALQQQYVVPSTGATLTYDTAIPLLELLCASAPSDQYGVLR 584
Query: 581 PKFHINKEMG----ICTLYLPNNCPIQTVI--------AQGNIKTLKQAACLEACKKLHQ 628
P + + +E+G + LP P+ + + + ++AA A +LH
Sbjct: 585 PSYTV-EELGEQAFRAAVALPPALPLPRAALRFDSGDEPRKSKREARRAAAFAAVAELHS 643
Query: 629 IGALTDNLLP 638
+G D+LLP
Sbjct: 644 LGVFDDHLLP 653
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 183/399 (45%), Gaps = 66/399 (16%)
Query: 923 LPPELC-RIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
+P +C R+ ++ I T + ++P + RL + A L +P I++
Sbjct: 911 VPQSVCYRLCLSSI---TADAVRYLPQLTRRLCDVARATALD------------LPGIEL 955
Query: 982 ---LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+EA T F + LETLGD+FLK S F + HEG L+ + ISN
Sbjct: 956 NALIEATTLPPAMMGFDNQRLETLGDAFLKLGVSVYAFHAFPFKHEGQLTNVRIPSISNK 1015
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
+L R +F+ + ++ S E++ ++ R G+ ++ ++
Sbjct: 1016 SL-----------LARARAFNLQRYL-------SVEVSSRRKWSPR--LTNGKVEMPRRS 1055
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGI------------KVDFVNVPYQRQFQVHAE 1146
+ + VEAL+GA ++GG L ++G+ V V P +R
Sbjct: 1056 MQECVEALLGAAFASGGVPCALAVGGKLGLCFGPPDKLWTERYVKPVPSPLRRPL----- 1110
Query: 1147 RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
+ L+ L + F + +LL+EA+TH S E P Y+RLEFLGDA+LD + YL+
Sbjct: 1111 ----LHELQQRLGHEFANETLLLEAVTHRSMQSSETP-SYERLEFLGDALLDMAVMQYLF 1165
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYA-LSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
KYP + G L+ R +V N A +++ + +H+ +L EL K I+ ++S
Sbjct: 1166 KKYPQATCGQLSWARQRAVCNSTLAWIAATRLHVHECLLQNHIELAKVIDAARQELIEMS 1225
Query: 1266 LGSTF--GWESVTSFPKALGDIIESLAGAIFVDSGCNRE 1302
GW+ PK GD++E++ A+F+D G + E
Sbjct: 1226 AEQVIRDGWK--MDMPKPPGDLVEAVFAAMFIDMGHDYE 1262
>gi|148686841|gb|EDL18788.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Mus musculus]
Length = 1908
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 328/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 26 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 85
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 86 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 144
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 145 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 198
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 199 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 252
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 253 TDRSGLYERLLM-ELEAALDFIN-DCNVAVHSKERDSTLISK---QILSDCRAVLVVLGP 307
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 308 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 355
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 356 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 412
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 413 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 472
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 473 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 532
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 533 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 592
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 593 VHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 651
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 652 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 706
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 173/373 (46%), Gaps = 83/373 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1542 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1601
Query: 1128 ---------------------IKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLN 1159
++ + +P + F H + + HL E +N
Sbjct: 1602 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFD-HPDAEKTLNHLISGFETFEKKIN 1660
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1661 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1720
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1721 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELR 1776
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1777 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVP 1836
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1837 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1890
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1891 ARRALRSLKANQP 1903
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1289 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1348
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1349 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1394
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1275 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1327
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1328 PDAHEGRLSYMRSKKVSN 1345
>gi|117168271|ref|NP_683750.2| endoribonuclease Dicer [Mus musculus]
gi|225000568|gb|AAI72621.1| Dicer1, Dcr-1 homolog (Drosophila) [synthetic construct]
Length = 1906
Score = 226 bits (577), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 328/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 142
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 143 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 196
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 197 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 250
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 251 TDRSGLYERLLM-ELEAALDFIN-DCNVAVHSKERDSTLISK---QILSDCRAVLVVLGP 305
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 306 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 353
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 410
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 411 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 470
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 471 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 530
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 531 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 590
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 591 VHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 649
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 650 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 704
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 173/373 (46%), Gaps = 83/373 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1599
Query: 1128 ---------------------IKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLN 1159
++ + +P + F H + + HL E +N
Sbjct: 1600 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFD-HPDAEKTLNHLISGFETFEKKIN 1658
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1659 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1718
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1719 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELR 1774
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1775 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVP 1834
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1835 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1888
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1889 ARRALRSLKANQP 1901
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1392
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1273 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1325
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1326 PDAHEGRLSYMRSKKVSN 1343
>gi|254281274|ref|NP_001156875.1| endoribonuclease Dicer [Taeniopygia guttata]
Length = 1921
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 210/714 (29%), Positives = 319/714 (44%), Gaps = 120/714 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y + W W +E SKH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEITESWTKEKWSQEFSKHQVLVMTCH 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L LR Y L+ I +L+ DECH A H Y IM ++ E S PRI G+TA
Sbjct: 154 VALTVLRNEYLSLSNINLLVFDECHLAIQDHPYREIM-----KICEDYPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K +E + +KI LE ++ S T VL + T++ D P+
Sbjct: 208 SILNGKCDPAELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPYT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L L + EL + N D N E + LI K +I S L LG W
Sbjct: 262 DKSGLYGRL-LKELDEALAFLN-DCNISVLSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSEL---LPRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEV---LSHASLP 532
S++QS+GRAR S+Y+++ + + + L+ Y A +R + + +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDASETE 600
Query: 533 CSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK---FHINK 587
P+ ++ ++ + T+++++ I YC+RLPSD + PK + +
Sbjct: 601 TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTWELPD 660
Query: 588 EMGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I + + A L C+KLH+IG L D+L+P
Sbjct: 661 HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 176/374 (47%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 1132
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGTLCATRENCNSE 1612
Query: 1133 ----------------------------VNVPYQRQF-QVHAERLVN-----VRHLESLL 1158
+ +P + F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVAASVVNSEPSLCKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1849 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1902
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|20385913|gb|AAM21495.1|AF430845_1 dicer-like protein [Mus musculus]
Length = 1917
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 328/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 35 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 94
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 95 KRTVFLVNSANQVCQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 153
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 154 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 207
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 261
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 262 TDRSGLYERLLM-ELEAALDFIN-DCNVAVYSKERDSTLISK---QILSDCRAVLVVLGP 316
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 317 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 364
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 365 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 421
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 422 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 481
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 482 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 541
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 542 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 601
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 602 VHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 660
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 661 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 715
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 173/373 (46%), Gaps = 83/373 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1551 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1610
Query: 1128 ---------------------IKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLN 1159
++ + +P + F H + + HL E +N
Sbjct: 1611 QKSLSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFD-HPDAEKTLNHLISGFETFEKKIN 1669
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1670 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1729
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1730 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELR 1785
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1786 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVP 1845
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1846 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1899
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1900 ARRALRSLKANQP 1912
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1403
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1284 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1336
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1337 PDAHEGRLSYMRSKKVSN 1354
>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor
FP-101664 SS1]
Length = 1459
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 308/672 (45%), Gaps = 77/672 (11%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
++VS LP R YQ E A + N I L+TGSGKT I+ +L++ A + +
Sbjct: 6 DQVSDTLLP--RRYQEEIFVRAQQGNVIAALDTGSGKTFISTLLIKWIAARDVGHNNLI- 62
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFLVPKV LV QQ E I T L+V ++ G D D WK E +V VMT QI L
Sbjct: 63 VFLVPKVALVQQQGEFIAKQTSLRVRQFSGATAHDMGDRDGWKTEFENSDVFVMTAQIFL 122
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ + S++ ++ + +++ DECHH R H Y IM E++ +T + P+IFGMTASPI
Sbjct: 123 NLITHSHWGIDKVTLIVFDECHHTRKNHAYNGIMREYF----QTPVGSRPKIFGMTASPI 178
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASE-SVLSNFIPFSTAKFKFYKYDEIPHALY 250
+ +++E + LE +++KV LS P T + Y I + Y
Sbjct: 179 WNPKNAAE-----SLATLERNLDAKVIAVKEHMDELSGHSPKPTEIIQVYPAPPIKYPEY 233
Query: 251 THLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL----- 305
K R L NL+ A+ + K+ LY L G L L
Sbjct: 234 PS----------KSLRRLLNLEDTPAEIGIPVDKILTRYEVTLYSLGPFGAELFLYTEVK 283
Query: 306 -KAAETI-------------SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA 351
+ A+ I + Y A E + +K D + L ++
Sbjct: 284 QRVAQMIQDALDLSMDYLTPAQYAQTARAGPVSPDMLENVPQKL-KDLHRTLESFRDFFE 342
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL 411
G D + + K+ L E+L E R + + IIFVE+ A L +L +
Sbjct: 343 TPESGSDP-IPIPMSWCSPKVRKLAETLFE-RYTDSFQGIIFVEQRHVATCLAVILERIP 400
Query: 412 PRHCTWKTKYIAGNN-----SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
K++ + G+ + + + Q + V+ FR +NV+VATS+ EEGLD +
Sbjct: 401 LLAHVIKSEQLVGHGKDTAKAHTKGMGTRNQQDTVKMFRERAINVLVATSVAEEGLDFPA 460
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL--ASGNKMRKE 524
C+LVI FDP + + ++QSRGRAR + S +++M++ G Q++ E YL + K+
Sbjct: 461 CDLVIRFDPVQHMVGYVQSRGRARHKTSTFIIMLQEG---AQAQAERYLQFSQSEPHLKQ 517
Query: 525 VLSHASLPCSPL-----NNHMYGEDF-----YHVESTGTIATLSSSVSLIYFYCSRLPSD 574
V L + + H ED Y V STG + T +S++ L+ CS +P D
Sbjct: 518 VYQERDLALKAIVEEEEDTHDDPEDLAERERYVVPSTGAVLTYTSAIGLLNHLCSLIPRD 577
Query: 575 GYFKPTPKFHINKEMG--ICTLYLPNNCPIQT--VIAQG----NIKTLKQAACLEACKKL 626
+ TP H+ G T++LP++ P+ ++ QG + K K+AA A K L
Sbjct: 578 KF---TP-MHVPTYTGDVSATVHLPSSLPLPADLLVYQGPPRRSKKEAKRAAAFLAVKSL 633
Query: 627 HQIGALTDNLLP 638
H + D LLP
Sbjct: 634 HVLNVFDDYLLP 645
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 214/437 (48%), Gaps = 39/437 (8%)
Query: 913 QKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ 972
+++P+ + F L E+CR + P + + +F +P + HR+ + A + L
Sbjct: 892 RQKPATVIFPL--EICRWALMPEHI--YRTFFVLPELCHRVTDVWRAHEARIAL------ 941
Query: 973 NVTIPTIK---VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSV 1029
+P I +++A+T F+ + LETLGD+ LK +A L+ Y + HEG L
Sbjct: 942 --KLPPIADDLLVQALTLPSTNAQFNNQRLETLGDAVLKLSAVVHLYNKYPHRHEGQLDA 999
Query: 1030 KKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYEL-NDDSLFNGRKIYV 1088
K ++N L G E+ L + +E +MW Y + ++D LF+ R
Sbjct: 1000 MKRVSVANRTLLARGVERSLERHLSSEPQSMRMW--------RYVISSEDDLFSARPSRQ 1051
Query: 1089 TGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQV---HA 1145
R + K++ D +EAL+GA +TGG ++ L +G+ P+ ++ + +
Sbjct: 1052 APR-RFPRKSMQDCMEALLGASFATGGIDMALHAGTVLGVSFGG-PTPWNIRYGLLMPKS 1109
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
E L+ L Y F LL+EA+TH S+ + YQRLEFLGDA++D ++T YL
Sbjct: 1110 EPSPLFLTLQEALGYRFEHGQLLLEAVTHPSFGSAD-SSSYQRLEFLGDALIDMVVTEYL 1168
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYA-LSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
Y K+P + G L+ RS +V A L+ + GLHK +L + EL I V E++
Sbjct: 1169 YKKFPEATSGQLSWARSRAVCGTALASLAVNRLGLHKLLLINNVELSIAIGRYVPILEEI 1228
Query: 1265 SLGSTF--GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI---TPE 1319
+ GW+ PKAL D+ ES+ GA+FVD N + I ++E +I P+
Sbjct: 1229 TNEEIILDGWKH--DPPKALSDVFESVMGALFVDCDYNYDKAAAVIEMVMEDLIGALRPD 1286
Query: 1320 TMRFHPVRELTEYCQKN 1336
R PV +L + K+
Sbjct: 1287 LPR-DPVSQLMVWVAKS 1302
>gi|22830885|dbj|BAC15765.1| double-strand-specific ribonuclease MDCR [Mus musculus]
Length = 1906
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 327/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 142
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 143 YVALTVLKNGYLSLPDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 196
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 197 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY----TSQPCEIVVDCGPF 250
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ N D N E + LI K +I S L LG
Sbjct: 251 TDRSGLYERLLM-ELEAALDFIN-DCNVAVHSKERDSTLISK---QILSDCRAVLVVLGP 305
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T+++K + +
Sbjct: 306 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------ 353
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 ---SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD 410
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 411 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 470
Query: 424 GNNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
G+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 471 GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP 530
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 531 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEAD 590
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
++ + ED + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 591 VHAGVDDEDTFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 649
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 650 DGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 704
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 173/373 (46%), Gaps = 83/373 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1599
Query: 1128 ---------------------IKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLN 1159
++ + +P + F H + + HL E +N
Sbjct: 1600 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFD-HPDAEKTLNHLISGFETFEKKIN 1658
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1659 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1718
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1719 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELR 1774
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1775 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVP 1834
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1835 RSPVRELLEMEPETAEFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1888
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1889 ARRALRSLKANQP 1901
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1392
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1273 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1325
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1326 PDAHEGRLSYMRSKKVSN 1343
>gi|336380656|gb|EGO21809.1| hypothetical protein SERLADRAFT_441040 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1460
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 202/703 (28%), Positives = 317/703 (45%), Gaps = 99/703 (14%)
Query: 14 VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF 73
VS LP R YQ E A N I L+TGSGKT I+I+L++ + L K V VF
Sbjct: 11 VSESILP--RRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIK-WIVLQEKAKRKVIVF 67
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LVPKV LV QQA++I HT L+V + G + +D D A WK+ + ++ V QI L+
Sbjct: 68 LVPKVALVKQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDLTVAAAQIFLNI 127
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L S++ + + +LI DECHH R H Y IM E++ +T S+ P++FGMTASPI +
Sbjct: 128 LTHSHWSVEKVSLLIFDECHHTRKNHAYNGIMHEYF----QTIPSDRPKVFGMTASPIWN 183
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASE------------SVLSNFIPFSTAKFKFYK 241
+D + LE +++ V V+ F P S Y
Sbjct: 184 P-----KDAEGSLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDT----YD 234
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLE---NLDLNEAQAELIRKKVSKINSTLLYCLSE 298
Y LY L D L++ T ++E +D + ++ R + ++ L+ ++
Sbjct: 235 Y------LYPTLWDCLSLF----TNAVEINIPVDKLHMKYQMTRNSLGAFSAD-LFLYTD 283
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD 358
+ L E S F LDGF I S+++Q+ + E
Sbjct: 284 IKTRLIHFIDELESSQNETFLG---LDGFDHHIDVDESSESAQSQFPAISPDLEQIDAIL 340
Query: 359 SKFN--LDSG-------------LLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVL 403
S+F DSG T K+ L+E LLE+ I+FVE+ A L
Sbjct: 341 SEFRPFFDSGTEVPAVPIPVPLAWCTPKVNALVEVLLEHYS-PTFHAIVFVEQRQVAACL 399
Query: 404 QSLLSELLPRHCTWKTKYIAGN----------NSGIQCQSRKKQNEIVEEFRRGLVNVIV 453
+L + + + G+ NS + +Q + VE FR+G +N++V
Sbjct: 400 AKILPCIPELRGYVRCAELVGHGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLV 459
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+ EEGL +C++V+ FDP + + ++QSRGRAR + S +++M + S R
Sbjct: 460 ATSVAEEGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNA 519
Query: 514 YLASGNKMRKEVLSHASLPCSPLN---------------NHMYGEDFYHVESTGTIATLS 558
+L S ++++ + + L+ + + Y V STG + T
Sbjct: 520 FLKSEPELKRVYQTREEPAATRLDPGEDSEEGEVEEDDPADVAVRERYIVPSTGAVLTYD 579
Query: 559 SSVSLIYFYCSRLPSDGYFKPT-PKFHINKEMGICTLYLPNN--CPIQTVIAQG----NI 611
S+V+L+ CS +P D Y P PK+ + + L LP++ PI + G +
Sbjct: 580 SAVNLLNHLCSLIPHDAYTPPQLPKYSGDYAV---MLELPSSLPLPIDRLFFSGPERRSK 636
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLPDIVVE---KHDAQKRG 651
+ K+A A K+LH++ D LLP + DA RG
Sbjct: 637 REAKRAVAFLAVKELHRLDVFDDYLLPATSSKGRGTEDADGRG 679
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 207/458 (45%), Gaps = 53/458 (11%)
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK-------------QKEPSK 918
TY+ ++ +R+ + RE + YL +C +++ ++
Sbjct: 860 TYRDYFVQRWTRK---KREAFVPENSFLIEATYLPRCPSSVYRVREHLIDLDLCKRQIAR 916
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA------VNLKNMLLDHCMQ 972
+P + CR + S + +F +P + R+ + A + L + D ++
Sbjct: 917 AGLLVPKDACRRVH--FSEDVYRAFLLLPKLCRRVTDVYRARQERIELGLPMIAEDLLIE 974
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
T+PT + F+ + LETLGDS LK ++ + Y + HEG LS ++
Sbjct: 975 ASTLPTTSLT-----------FNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSHLRQ 1023
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK 1092
+SN L E +L F+ +ES + W Y + +D+ +I + R+
Sbjct: 1024 NSVSNRTLLSRAKEIELERFLNSESHNLHFW--------RYTVPEDTDSTLCRIRRSTRR 1075
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVN-- 1150
+ +++ D +EA +GA TGG ++ L +G+ +P+ ++ E
Sbjct: 1076 EFPRRSLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGG-PIPWSLKYSRRPESSPAPH 1134
Query: 1151 -VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
L+ L Y F LLVEA TH S+ YQRLEFLGDAV+D ++ YLY ++
Sbjct: 1135 LFADLQESLCYEFHRGDLLVEAATHPSFAT-SASSSYQRLEFLGDAVIDLVVLNYLYRRF 1193
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGS 1268
P + G L+ RS +V A SV+ LHK +L + EL IN V E S+
Sbjct: 1194 PQANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVED 1253
Query: 1269 TF--GWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
GW+ PKAL D++ES+ GAIFVDS N E V
Sbjct: 1254 IINKGWK--YDPPKALSDVLESVVGAIFVDSAYNFEKV 1289
>gi|344274190|ref|XP_003408901.1| PREDICTED: endoribonuclease Dicer [Loxodonta africana]
Length = 1920
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 321/715 (44%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL +NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDRNTIVCLNTGSGKTFIAVLLTKELSYQIRGEFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWNQEFMKHQVLVMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILQSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + A +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADAGETD 600
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
L + +D + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 601 LEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 659
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 660 DGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 139/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1666 NFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1725
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1726 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1781
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1782 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLELVWQVYYPMMRPLIE 1841
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1842 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1895
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1896 RIAKSAAARRALRSLKANQP 1915
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1293 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1352
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1353 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1386
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1289 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1341
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1342 MRSKKVSN 1349
>gi|255953957|ref|XP_002567731.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589442|emb|CAP95586.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1495
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 297/641 (46%), Gaps = 84/641 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL-LRKPS----PFVAVFLVPK 77
R YQ+E E A NTI L+TGSGKTL+A++LL+ + L K + P VA FLV
Sbjct: 80 REYQIELFERARASNTIAVLDTGSGKTLVAVLLLKHILQIELNKRANGRKPRVAFFLVDS 139
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ+ ++ + D VG ++G++G D WD TW + + K+ V+V T +IL L
Sbjct: 140 VTLVFQQSAVLRNNLDQSVGHFYGNLGPDLWDQQTWDKHLEKYMVIVCTAEILNHSLLNG 199
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ +H YA I+ + Y L+ PRIFGMTASP+ +K
Sbjct: 200 HIGIDQINLLIFDEAHHAKKEHPYARIIRDSY---LKADPGKRPRIFGMTASPVDAKC-- 254
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFI--PFSTAKFKFYKYDEIPHALYTHLAD 255
D + LETL+N ++ T + ++L NF+ P + YD++P L THL
Sbjct: 255 ---DIAEAAMQLETLLNCRIATTSDLALLRNFVNKPIEEE----WVYDKLPLPLETHLHS 307
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYE 315
L ++ + E S++ S +C + VW + E + E
Sbjct: 308 TLKT-------KYGDMPILEGAFRFASVASSELGS---WCADQ--VWALALSDEVLPKLE 355
Query: 316 SDFFAWEQLDG----FGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEK 371
+ D IK+ +A+Q + Y+ + ++ D L+ K
Sbjct: 356 GSVGKASESDPQDSEKASEEIKRI-QEANQLVKEYI-ANQTFTPSD----------LSSK 403
Query: 372 IVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQ 430
+ L+ L E + D +CI+F +R TA VL L +L + + + G G
Sbjct: 404 VELLMRKLQEQFAKSPDTKCIVFTQRRNTAKVLLQLCEKL--QFPNLRPDVLVGVRKGDA 461
Query: 431 C---QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
+ ++Q ++ +FR+ +N + ATS+ EEGLD+ CNLV+ FD TV ++QSRG
Sbjct: 462 LGMNSTFRRQFLVLVKFRKSEINCLFATSVAEEGLDIPDCNLVVRFDLYDTVIQYVQSRG 521
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF-- 545
RAR +S Y MV+ G+ +RL+ R E L P + +Y +D
Sbjct: 522 RARRADSVYATMVECGNRNHSTRLQEV------RRAEHLMKNFCNLLPEDRKLYRDDHDM 575
Query: 546 ------------YHVESTGTIATLSSSVSLIYFYCSRL---PSDGYFKPTPKFHIN---- 586
Y + STG + T ++ ++ + S L P ++ +
Sbjct: 576 GVLIHQEDRKRTYTIPSTGAMLTYRHAIGVLARFASSLLTVPKSQQYENEISASVTYIVM 635
Query: 587 --KEMGICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEAC 623
E C + +P P++ V+ K KQ+A +AC
Sbjct: 636 SENESFSCEIIMPEKSPVRRVLGCSEPKKSLAKQSAAFDAC 676
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 219/449 (48%), Gaps = 42/449 (9%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C +P+L I +N+L K ++++ ++ P + ++ I +S +
Sbjct: 933 CIWTQPVLQAELICLRRNFLDKAAEEERASNTRCVICPQP----LAISAIPMSVAATCLV 988
Query: 946 VPSIMHRLQSLLLA------VNLKNMLLDHCMQNVTIPTIKVLEAITTK-KCQEDF--HL 996
P+I+ R++S L+A ++L ++ L++ ++ T + E + + Q +
Sbjct: 989 FPAIISRMESYLIAQEGCKMLDLGDIKLEYALEAFTKDSDNTEEHRSLQIHVQRGMGKNY 1048
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E LE LGDS LK A S LF ++ E V + +I N L K E KL +IR+
Sbjct: 1049 ERLELLGDSVLKMATSISLFAQNPDDDEYDYHVNRMCLICNKNLFKNAIELKLYEYIRSR 1108
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 1116
F MW PG S E D + + I G+ + KT+ADV EALIGA L +GG+
Sbjct: 1109 GFSRHMWYPPG---LSLEYGRD---HAKFIDSEGKHSLAEKTIADVCEALIGASLLSGGD 1162
Query: 1117 -NVGLIFLDRIGIKVDFVN--------------VP-YQRQFQVHAERLVNVRHLESLLNY 1160
N + + + I V+ N +P YQ + E+ + R + + Y
Sbjct: 1163 DNRYDMAIKAVTIFVNSQNHTATSWKDYISAYSIPLYQNRAPDGFEKNL-ARQIFEKVGY 1221
Query: 1161 SFRDPSLLVEALTHGSYMLP--EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
F+ P LL A TH SY L ++P CYQRLEFLGDA+LD + +L++++P P +LT
Sbjct: 1222 DFKYPRLLRSAFTHPSYPLAWAKVP-CYQRLEFLGDALLDMVCVEHLFHRFPNRDPQWLT 1280
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELY---KRINITVDSFEKLSLGSTFGWESV 1275
+ + A V+N +VK GLH H+ H S+ L + + E S G W S
Sbjct: 1281 EHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNSKYAEEIQLAESESNGEVDYWLST 1340
Query: 1276 TSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ PK L D++E+ GAIFVDSG + V+
Sbjct: 1341 SDSPKCLPDMLEAYLGAIFVDSGFDFTVI 1369
>gi|195124758|ref|XP_002006854.1| GI21295 [Drosophila mojavensis]
gi|193911922|gb|EDW10789.1| GI21295 [Drosophila mojavensis]
Length = 1728
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 220/880 (25%), Positives = 389/880 (44%), Gaps = 140/880 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
AR+YQL +E +K+N I++L TGSGKT +AI+ L+ ++ + K A+F+ V
Sbjct: 12 ARSYQLRLVEYIVKRNGIIYLPTGSGKTYVAILALKRFSQNMDKSIEEGGQRALFICNTV 71
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
L QQA ++ T+ KVG Y G+ G D W W EE+ H+VLV T Q++L+ + +Y
Sbjct: 72 ELARQQAICVRKLTNFKVGYYVGEQGTDNWKKNKWDEEIHNHQVLVGTAQVILNLISENY 131
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
L + + ILDECHH GKH Y M + +E+G LPRI G+T IK +
Sbjct: 132 MSLTSVSIAILDECHHGTGKHPYHEFM-KLVQMQMESGIKKLPRIVGLTGVLIK---GNE 187
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK-----------FYKYDEIPH 247
++ +++ +LET + T + L N + ST + F K +EI
Sbjct: 188 IKEVAKRLKELETTYCGNIITVSDTKELENVMLHSTKPRESIMTYKSEVQTFGKIEEIRQ 247
Query: 248 ALYTHLAD-ELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN-STLLYCLSELGVW--- 302
+ + EL I + R + + + Q E +K K+ + LY L G++
Sbjct: 248 RIRNYFYTLELQDIGHQPVRMSKGMRI---QREPNKKSAIKLQINDFLYQLDNYGIYAGS 304
Query: 303 -----------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA 351
+ + AET+S A + ++ K
Sbjct: 305 IAIVSLIVEFEIKRRQAETLSLRNMYRSAITLCESVRHMLVSKLR--------------- 349
Query: 352 EWSIGDDSKFNLDSGLLTEKIVC-----LIESLLEY-------RGVEDIRCIIFVERVIT 399
+ DD + + D + TE+++ ++ L+Y + +DI C++FVER T
Sbjct: 350 --DMLDDDQMS-DDMINTEEVIMNFSTPKVQLFLQYLKQTFANKQPKDICCLVFVERRYT 406
Query: 400 AIVLQSLLSELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNV 451
+ LL + + +++ G SGI R+ ++EFR G N+
Sbjct: 407 CKCIYGLLLNYIAATPELRNVLFPQFMVG-RSGIFHDFDKLERRWLKSAIQEFRDGEANI 465
Query: 452 IVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD---STTQ 508
++ +S+LEEG+DVQ+CN VI+ DP +T ++Q++GRAR + + + M+ S D T
Sbjct: 466 MICSSVLEEGIDVQACNYVIILDPIKTFNMYVQTKGRARSKEASF--MIISSDLEKQKTS 523
Query: 509 SRLENYLAS----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLI 564
+++ Y + G ++ VL A + +N H + + +G + SS+++L+
Sbjct: 524 TQILQYRKAHADIGEYLKDRVLERADPQLNDINEHFQDDIPPFINGSGAVLLASSALALV 583
Query: 565 YFYCSRLPSDGYFKPTPKFHI---------NKEMG---ICTLYLPNNCPIQTVI---AQG 609
+ YC +PSD + P F + K+ + +L LP N ++ I A
Sbjct: 584 HRYCQHMPSDAFGIVLPWFKLLEQEERKAFTKDWAQKYVVSLTLPLNSALRETIYSDAMP 643
Query: 610 NIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA------------------QKRG 651
+ K +A + C KL+Q+G L + LP +E+ ++
Sbjct: 644 YTRLAKISAAFKTCVKLYQMGELNERFLPTTAIERVAEIANIHFEHWKNYGDNVTFKRSD 703
Query: 652 NEPYNAEHPIY---FPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELE 708
E N+ Y +P EL + PQ T + Y I ++ H++ + +I +++T
Sbjct: 704 REQINSNMKTYATKYPEELNDAMPQ-VGATCYAYEISVEPHYDRNDYTSHIYDSLQTRRN 762
Query: 709 SEI-------KKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDH 759
+ + L +G++ ++ R +I Q+ + F + +FR I+
Sbjct: 763 YALLLTKRLPRMAEMPLFSHQGKMHAHVAEQPRAVVIQTEEQLEQLQHFHVMIFRDIL-- 820
Query: 760 NLDKLNEILDGFELRDNLEIDYLLLPST---GQLIDWKTV 796
++ + F+ N E +L++P + G IDW V
Sbjct: 821 ---RIWQPFFVFDRHSN-ENSFLVVPLSAMPGVDIDWPLV 856
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 216/527 (40%), Gaps = 124/527 (23%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E E LGD FLK +A+ L Y + +EG+L+ K ++SN L
Sbjct: 1202 LAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANRYPDWNEGILTQVKSTLVSNRNLL 1261
Query: 1042 KLGCEQKLPGFIRTESFDPKM-WIIPG------------DNSG-----------SYELND 1077
E +P I + F PK W+ P +N G + +++
Sbjct: 1262 YCLSETDIPQRICSTLFTPKYSWLPPSVSLPQNVKALWKENPGVAALVGPHNLRNLSISE 1321
Query: 1078 DSLFN----GRKIYVT--------------------------GRKKVKSKTVADVVEALI 1107
+ LF G++ ++ G+ ++ K +AD +EA++
Sbjct: 1322 EELFGDGNCGKQSFINFVNGCQANQQSHHAGLDYSSEINFCLGQVQMPDKLIADTLEAIL 1381
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G + G L+ GI P + Q+ R L+N +
Sbjct: 1382 GVVVKNYGLHHGFRMLEYFGICKPDNGKPLTQLLDLQLGGSRMRTNISQHEVDGFLINHQ 1441
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F D + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1442 YLEKNLGYTFCDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHKTRM 1501
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILH------------------ASHELYKRI 1254
+PG LTD+RSA VNN A V+H H IL +H + +
Sbjct: 1502 TPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLSESIQNFVQFQETQNHRVTNHV 1561
Query: 1255 NI----------TVDSFEKLSLG-------------------STFGWESVTSFPKALGDI 1285
I +DS E+L + F PKALGD+
Sbjct: 1562 RILMEEKDVQPEPLDSDEELEMAELAAKQAKPAIREADAPKVGEFNISHNVDVPKALGDV 1621
Query: 1286 IESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEY-CQKNHFSMKK 1342
+E+L A+++D + +Q + L EP + + +P+R+L E+ K FS
Sbjct: 1622 LEALIAAVYLDCR-DLNTTWQVVYKLFEPELLEFSRNVPLNPIRQLFEHKLAKPTFS--S 1678
Query: 1343 PVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
PV + + VT + + + + K AK A K L+ L
Sbjct: 1679 PVMD--NNQVMVTCQFICMDKTIKVYGFGNNGKQAKLSAAKHALQKL 1723
>gi|440655799|gb|AGC22548.1| dicer [Ctenopharyngodon idella]
Length = 1881
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 208/710 (29%), Positives = 318/710 (44%), Gaps = 116/710 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
+E D + R YQ+E LE AL+ NTIV L TGSGKT IA++L++ ++ +R
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGEDRKRT 83
Query: 72 VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VFLV V QQA ++ H+DL+VG Y + + W W EM ++VLVMT I L
Sbjct: 84 VFLVNAASSVVQQASTVRTHSDLQVGDYMSEE-MTTWPEEIWNREMMGNQVLVMTCHIFL 142
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
L+ L+ I +L+ DECH A H Y IM ++ E G PRI G+TAS +
Sbjct: 143 HVLKNGVLPLSKINLLVFDECHLAITDHPYQEIM-----KICE-GCPGCPRILGLTASIL 196
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYT 251
K D +KI +LE ++ S T VL + ++ + D + +
Sbjct: 197 NGKCDPC--DLEEKIQNLEKILQSNAETATDLVVLDRY----ASQPREVVLDCGLYHDQS 250
Query: 252 HLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC---LSELGVWLALKAA 308
L+D L + EL N D N + R L C L+ LG W A KAA
Sbjct: 251 GLSDRL-LSELDEALHFLN-DCNLSTHREDRDPTFISKQVLNDCRAVLTVLGPWCADKAA 308
Query: 309 ETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
+ + EQ + F +TI++K + + S +
Sbjct: 309 GIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHF---------------SPAS 353
Query: 363 LDSGLLTEKIVCLIESLLEYRGVE------------------------------------ 386
LD +T K++ L++ L EY+ E
Sbjct: 354 LDLKFVTPKVIRLLDILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAK 413
Query: 387 ------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQ 430
+I C IIFVER TA+VL L+ E P + +I G++ G +
Sbjct: 414 EKPEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG-K 472
Query: 431 CQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S+
Sbjct: 473 NQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSY 532
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTT-QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
+QS+GRAR S+Y+++ S + T + L+ Y A +R + A C+
Sbjct: 533 VQSKGRARAPVSNYIMLADSERTKTFEEDLKTYKAIEKILRNKCSKSAE--CNEFELEPV 590
Query: 542 GED-------FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH-INKEMG--I 591
+D E G T+++++ I YC+RLPSD + PK + + G
Sbjct: 591 TDDDNVLPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELKTGGYR 650
Query: 592 CTLYLPNNCPIQTVIAQGNI---KTLKQAACLEACKKLHQIGALTDNLLP 638
TL+LP N P++ + + + ++A L C+KLH+IG L D+L+P
Sbjct: 651 STLFLPINSPLRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMP 700
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 173/340 (50%), Gaps = 48/340 (14%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 1137
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 1546 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 1605
Query: 1138 QRQF-QVHAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
+ F AER +N + E +NY F++ + L++A TH SY I CYQRLEF
Sbjct: 1606 RCMFDHPDAERTLNHLISGFENFEKKINYMFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1665
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1666 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1725
Query: 1252 KRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDIIESLAGAIFVD 1296
+D F + L G +S PKA+GDI ESLAGAI++D
Sbjct: 1726 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1781
Query: 1297 SGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEYCQKNHFSMKKPVASRISGKAAV 1354
SG + E V+Q P++ P+I + PVREL E + + P GK V
Sbjct: 1782 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLE--MEPETAKFSPAERTYDGKVRV 1839
Query: 1355 TVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
TVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1840 TVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1876
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDD---SLFNGR 1084
+LG ++ LP + FDP + W+ PG D S + + + D L NG+
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSTTDKWDSDENKDLANGK 1409
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|22026807|ref|NP_523778.2| Dicer-2 [Drosophila melanogaster]
gi|21627058|gb|AAF57830.2| Dicer-2 [Drosophila melanogaster]
gi|342672109|gb|AEL30809.1| FI15132p1 [Drosophila melanogaster]
Length = 1722
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 437/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 9 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 68
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 69 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 128
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 129 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 182
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 183 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 239
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 240 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 297
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 298 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 357
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 358 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 417
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 418 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 477
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 478 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 536
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 537 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 596
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 597 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 656
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 657 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 712
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 713 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 769
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 770 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 821
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 822 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 879
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 880 KIVTQWYANY-------DKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 932
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 933 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 986
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 987 LKLIFLPSILNRMYFLLHAEALR 1009
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1195 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1254
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1255 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALGD 1314
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1315 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1374
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1375 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHY 1434
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1435 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1494
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1495 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1554
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1555 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1614
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1615 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1666
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1667 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1717
>gi|80979087|gb|ABB54746.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 437/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHY 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979085|gb|ABB54745.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 223 bits (569), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 437/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVAAIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKRMLVTKVHRRLTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHS 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979099|gb|ABB54752.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 437/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKRMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHS 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979097|gb|ABB54751.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 437/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVAAIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKRMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHS 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979089|gb|ABB54747.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 438/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL-- 773
L +G+L V + + +I N Q+ L +F +FR I+ +I F +
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL--------KIWHPFFVLD 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKRMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDVNYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHS 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|80979091|gb|ABB54748.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 438/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL-- 773
L +G+L V + + +I N Q+ L +F +FR I+ +I F +
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL--------KIWHPFFVLD 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEHKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKRMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHS 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|345803797|ref|XP_868526.2| PREDICTED: endoribonuclease Dicer isoform 4 [Canis lupus
familiaris]
Length = 1923
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 210/715 (29%), Positives = 320/715 (44%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWNQEFTKHQVLVMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L L ++EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYGRL-LVELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD 600
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
+ + +D + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 601 IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 659
Query: 591 ----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 660 DGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1669 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1728
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1729 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1784
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1785 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1844
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1845 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1898
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1899 RIAKSAAARRALRSLKANQP 1918
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1391
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|398392319|ref|XP_003849619.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
gi|339469496|gb|EGP84595.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
Length = 1537
Score = 223 bits (568), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 312/661 (47%), Gaps = 88/661 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA------YLLRKPSPFVAVFLVP 76
R YQ+E E A K+NTI L+TGSGKTLIA++LLR KPS V+ FLV
Sbjct: 94 REYQIELFERAKKENTIAVLDTGSGKTLIAVLLLRWMIDNELEDRAAGKPSR-VSFFLVS 152
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQ ++ + D KV + G VD ++ ++W++ +++V+V T +IL L
Sbjct: 153 SVTLVYQQHSVLECNLDHKVARLCGADNVDRFNKSSWEKLFYENKVIVCTAEILFQCLSR 212
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY + I +LI DE HHA+ H +A I+ +FY L E ++ PR+FGMTASPI +K
Sbjct: 213 SYITMKQINLLIFDEAHHAKQNHPFARIVKDFY--LTEPDATSCPRVFGMTASPIDAKT- 269
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
D Q +LETL+ ++ T + S+ + K +YD +P
Sbjct: 270 ----DVVQAASELETLLGCRIATTSDMSLAES---IKKPKECVLQYDALPQT-------- 314
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
T L++L E+ K + LG W A +
Sbjct: 315 -----GAETLLLQSLKARYGHVEVFNKTFEQATDISRV----LGRWCA-------DSHLV 358
Query: 317 DFFAWEQLDGFGETIIKKF-GSDASQA-------------------LVTYVPSGAEWSIG 356
D ++L T+ ++F D SQA V YV A S
Sbjct: 359 DALGSDKLKKLEATVERRFYARDRSQAADSEARQAELERQLKELRDAVAYVQEQAT-STA 417
Query: 357 DDSKFNLDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+ + D ++ K+ L L ++ + RCI+FV++ TA +L L ++ +H
Sbjct: 418 NLATVTADD--VSSKVWSLRGHLDAQFERPSNHRCIVFVDQRYTARLLTRLFQKIGTKHL 475
Query: 416 TWKTKYIAGNNSGIQCQSR---KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
++++ G+ SG + ++Q + +FR+G+ N + ATS+ EEGLDV CNLV+
Sbjct: 476 --HSQFLIGHGSGNADEGSFTFRQQVWTLLKFRKGVFNCLFATSVAEEGLDVPDCNLVVR 533
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
FD +T+ ++QSRGRAR NS ++ M++ G+S Q+ L N + K ++ + LP
Sbjct: 534 FDMYKTMIQYVQSRGRARNINSTFIHMLEMGNS-IQTNLLNEVRHQEKAMRDFCN--LLP 590
Query: 533 C--------SPLNNHMYGED---FYHVESTGTIATLSSSVSLIYFYCSRLPSDG--YFKP 579
LN + E Y V +TG T +++S++ + S +PSD P
Sbjct: 591 ADRKLDGNQDGLNELLEKEKNTRTYTVPATGAKLTYGNALSILAHFVSAVPSDSDEPQHP 650
Query: 580 TPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLL 637
T + + + + LP N PI++V+ + + K +A AC +L + L +L+
Sbjct: 651 TCVISVTGQKFLAEVLLPGNSPIRSVLGRPEQRKQLAKCSAAFNACLELRKKEYLDAHLM 710
Query: 638 P 638
P
Sbjct: 711 P 711
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 211/457 (46%), Gaps = 58/457 (12%)
Query: 888 DREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVP 947
D +P++ ++ +N L+ QQ+ +K + PE RI P L+T S F P
Sbjct: 961 DNQPVIEAEKVLLRRNMLASPDQQEVSVSTKAY--ICPEPLRISAIPPELAT--SLLFWP 1016
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI-KVLEAITTKKCQEDFHL--------ES 998
+++HR+++ L+++ + C + K + + QE + E
Sbjct: 1017 AVIHRIEAYLISIEGSASVGVACDPTFALAAFTKDSDNQGEHEAQERVNFQRGMGENYER 1076
Query: 999 LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESF 1058
LE +GD+FLK A + F N++E V++ +++ N L + E KL +IR+ +F
Sbjct: 1077 LEFIGDTFLKTATTISTFIQNPNDNEFEFHVRRMQMLCNKNLFEHALEYKLYEYIRSMAF 1136
Query: 1059 DPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA-FLS- 1112
+ + W G +G + + +++ +V G+K T+ADV EALIGA FL+
Sbjct: 1137 NRRTWYPEGMKLMAGTGVIKGQEKEMYHSEMTHVLGKK-----TIADVCEALIGAAFLTH 1191
Query: 1113 ----------------------TGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER-LV 1149
++ ++ +D K ++ YQ +R L
Sbjct: 1192 NQPDEKWQPHHWEPAIQAVTKLVKSDDHTMLTMD--DYKAAYLLPDYQTAHVTAVQRDLA 1249
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
LE YSF P LL A +H S YM ++P YQRLEFLGDA+LD YL+
Sbjct: 1250 EKIQLEHA--YSFNYPRLLYSAFSHPSNPYMHAQVPN-YQRLEFLGDALLDQASISYLFY 1306
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
K+P P +LT+ + A V+N V G HKH+ H+ L K+I+ VD +
Sbjct: 1307 KFPAADPQWLTEHKMAMVSNKFLGALCVNIGFHKHLRHSHSSLGKQIHAYVDELVEARTS 1366
Query: 1268 STFG----WESVTSFPKALGDIIESLAGAIFVDSGCN 1300
S W +V+ PK L D+IES GA+F+DS N
Sbjct: 1367 SGPDCRDYWTTVSDPPKCLPDVIESFVGAMFIDSNFN 1403
>gi|16215719|dbj|BAB69959.1| double-strand-specific ribonuclease [Drosophila melanogaster]
Length = 1722
Score = 223 bits (568), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 437/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 9 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 68
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 69 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 128
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 129 ALSSLGVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 182
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 183 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVLV--SFPHQEQVLTVTRLIS 239
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 240 AEIE--KFYVSLDLMNFGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 297
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 298 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 357
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 358 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 417
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 418 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 477
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 478 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 536
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 537 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 596
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 597 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 656
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 657 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 712
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 713 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 769
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 770 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 821
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 822 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 879
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 880 KIVTQWYANY-------DKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 932
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 933 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 986
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 987 LKLIFLPSILNRMYFLLHAEALR 1009
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 215/531 (40%), Gaps = 131/531 (24%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1195 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1254
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1255 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWQENPEFAKIIGPHNLRDLALGD 1314
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1315 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTILNKVIADTLEALL 1374
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1375 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHY 1434
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1435 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1494
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1495 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1554
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1555 RILLEEADVQPTPPDLDDELDMTELPHANKCISQEAEKGVPPKGEFSMSTNVDVPKALGD 1614
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1615 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1666
Query: 1342 KPV-ASRI--SGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
KPV S I G V+ + + + ++K AK A K L+ L
Sbjct: 1667 KPVFGSPIVEGGTVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1717
>gi|225561826|gb|EEH10106.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1502
Score = 223 bits (568), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 307/669 (45%), Gaps = 96/669 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS---PFVAVFLVPK 77
R YQLE E A N I L+TGSGKT IA++LL+ + L + S P ++ FLV
Sbjct: 91 REYQLELFEKAKAANIIAVLDTGSGKTFIAVLLLKHVIQSELADRASGNPPRISFFLVDS 150
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA +K + D + K+ G M D W TW++ SK+ ++V T ++L L S
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRS 210
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ I +LI DE HHA+ +H YA I+ +FY R E P+IFGMTASP+ +KV
Sbjct: 211 FIRMEQINLLIFDEAHHAKKEHPYARIVKDFYLRRPEA--QKRPKIFGMTASPVDAKV-- 266
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-KYDEIPHA-LYTHLAD 255
D + +LETL++S++ T +++ VL I T + Y K D LY +
Sbjct: 267 ---DVAKAAKNLETLLDSQIATASNQDVLRQAIARPTEQIWVYDKLDATSETDLYKCMQS 323
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-------LALKAA 308
I +++ KI L S LG W AL+AA
Sbjct: 324 RFGKI----------------------RELEKIFFYALEASSMLGRWCSDWLWTFALEAA 361
Query: 309 E------TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
E +S + + G E I + +A Q + + D+ +
Sbjct: 362 ELPKLEGRVSKSYMQSSSRDHSKGLDEAI--RLLREAGQLIRNHTF---------DTPVD 410
Query: 363 LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
+ L ++ + E L + D +CI+FV++ TA +L L S + RH +T +
Sbjct: 411 CPAHLSSKVRLLRHELSLYFERHTDTKCIVFVQQRHTARLLAELFSRIGTRHM--QTGIL 468
Query: 423 AG-NNSGIQCQ--SRKKQNEIVEEFRRGLVNVI--VATSILEEGLDVQSCNLVIMFDPSR 477
G + GI S ++Q + +FR+G +N + ATS+ EEGLD+ CNL+I FD S
Sbjct: 469 IGVQHDGIGGANFSFRQQFLTLLKFRKGELNCLEQFATSVAEEGLDIPDCNLIIRFDLSL 528
Query: 478 TVCSFIQSRGRARMQNS-----------------DYLLMVKSGDSTTQSRLENYLASGNK 520
T+ +IQSRGRAR NS Y MV+ G+ S ++ + +
Sbjct: 529 TMIQYIQSRGRARHSNSIVWLSLYDSECLANGTLQYAHMVERGNLIHASCIQEAQRAEHI 588
Query: 521 MRK--EVLSHASL---PCSPLNNHMYGEDFYH---VESTGTIATLSSSVSLIYFYCSRLP 572
MR+ E L + L ++ E +Y V STG T SS+ ++ Y S L
Sbjct: 589 MRRFCEALPEDRIIRGSSDDLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQ 648
Query: 573 SDGYFKPTPKFHINK--EMGICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQ 628
+ P + I + +C LP P + + + + + L +Q+A E C L +
Sbjct: 649 YEKETSPQVNYFIERIDSAFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRK 708
Query: 629 IGALTDNLL 637
G L D+ +
Sbjct: 709 NGILDDHFV 717
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 216/455 (47%), Gaps = 57/455 (12%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C ++P++ + +N L + +Q++ E + ++ + PE RI + +
Sbjct: 963 CDWKQPVVRAELVRLRRNLLDRATEQERGE--ETAYYICPEPLRI--SALPPPVAAFAFA 1018
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT------KKCQEDFHL--- 996
P+I+ R++S L+++ + L ++I T LEA+T + +E H
Sbjct: 1019 FPAIISRIESYLISLEACDKL------QLSIETHLALEALTKDSDNTEEHRKEQIHFQRG 1072
Query: 997 -----ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGD FLK A S LF +N E VK+ +I N L KL
Sbjct: 1073 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYE 1132
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK--VKSKTVADVVEALIGA 1109
F+RT+ F + W G L G+ + + K + KT+AD+ EALIGA
Sbjct: 1133 FVRTQGFSRRNWYPEGIK----------LLQGKAKSESAQNKQALGDKTIADICEALIGA 1182
Query: 1110 FLSTGGENVGL--------IFLDRIGIKV-------DFVNVPYQRQFQVHAERLVNVRHL 1154
L +GG+ +F+D +V D ++P + Q A +L + +
Sbjct: 1183 SLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLPSYQIAQADAGQLDLAKQI 1242
Query: 1155 ESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ L Y F P LL A TH SY +P CYQRLEFLGD++LD + +LY+ YP
Sbjct: 1243 GNRLGYYFTYPRLLRSAFTHASYPSAWSTVP-CYQRLEFLGDSLLDMVCVEHLYHHYPDR 1301
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE---KLSLGST 1269
P +LT+ + A V+N +VK GLHKH+L+ S+ L+ +I + E S S
Sbjct: 1302 DPQWLTEHKMAMVSNKFLGAVAVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSP 1361
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
W + + PK L D++E+ GAIFVDS + EVV
Sbjct: 1362 DAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1396
>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
Length = 1725
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 208/708 (29%), Positives = 318/708 (44%), Gaps = 121/708 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF-- 69
E+VS LP R YQ E A + N I L+TGSGKT I+ +L++ ++ K +
Sbjct: 6 EDVSDVLLP--RRYQEEIFARAQRSNVIAALDTGSGKTYISTLLIK---WISTKDAGLGK 60
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
+ VFLVPKV LV QQ + I T L+V KY G +D D TWK E+ +V VMT QI
Sbjct: 61 IIVFLVPKVALVDQQGDFIAKQTPLRVRKYCGATAIDLADRTTWKAELEGADVFVMTAQI 120
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTA 188
L+ L S + L+ + +++ DECHH R H Y IM E++ G S+ P+IFGMTA
Sbjct: 121 FLNLLTHSLWSLDRVSLMVFDECHHTRKNHAYNGIMREYFQ-----GSSDRRPKIFGMTA 175
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
SPI + +D + + LE +++KV I + + P
Sbjct: 176 SPIWNP-----KDAVESLATLERNLDAKV------------IAVRQHVDELMDHSPRPQE 218
Query: 249 LYTHLADELAMIELKHTRSL-ENLDLNEAQAELIRKKVSKINSTLLYCLSELGV------ 301
L L H+++L + LDL E I V KI + + LG
Sbjct: 219 LLHQYPAPLESYPAYHSKTLWDRLDLQRIPPE-IDIPVDKIRTRYEVTYASLGPYGAELY 277
Query: 302 ---------------------WLALKAAE-----TISCYESDFFAWEQL----DGFGETI 331
+LAL AE ++ +D +++ DG E
Sbjct: 278 LYNDIKQRIIQMQNTTSGMDEYLALNLAELNGDDALTAISADIPLPKEVEDLRDGLAE-- 335
Query: 332 IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCI 391
K F D + + V +W + K+ LI+ L + + + I
Sbjct: 336 FKSFFEDENGSEVIPTTVHLKWC--------------SPKVRELIDILFAHY-TSNFQGI 380
Query: 392 IFVERVITAIVLQSLLSELLPR-----HCTWKTKYIA-GNNSGIQCQSR----KKQNEIV 441
+FVE+ A + LS++LPR H + I G + + Q++ + Q +IV
Sbjct: 381 VFVEQRHVA----ACLSKILPRVPQLSHLIKTGQLIGHGTTNLAKMQTKGMALRTQQDIV 436
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
+ FR +N+++ATS+ EEGLD +C+LVI FDP + + ++QSRGRAR ++S +++MV+
Sbjct: 437 KLFRERKINLLIATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRGRARHRSSKFIIMVQ 496
Query: 502 SGDSTTQSRLENYLASGNKMR-------KEVLSHASLPCSPLNNHMYGEDFYHVESTGTI 554
G SR +N+ S +R + + Y V STG +
Sbjct: 497 EGHENHLSRYKNFSESEPHLRLVYQTRGDRDDIDEDEEERDDPADLAERERYVVLSTGAV 556
Query: 555 ATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTV------I 606
T +S+V L+ CS +P D Y PT H+ + G TL LP++ P+
Sbjct: 557 LTYNSAVGLLNHLCSLIPHDKY-TPT---HLPRYTGDFTSTLQLPSSLPLTPADLSFMGP 612
Query: 607 AQGNIKTLKQAACLEACKKLHQIGALTDNLLP---DIVVEKHDAQKRG 651
+ + K K+A A K+LH++G D LLP V + DA R
Sbjct: 613 EKRSKKEAKRAVAFLAVKRLHELGVFDDYLLPAQSSGVADHADADGRA 660
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 191/408 (46%), Gaps = 48/408 (11%)
Query: 905 LSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKN 964
LS CR+ + E + +F + PELC I + ++R + + + L
Sbjct: 902 LSMCRRAEFSEGVRDAFHVLPELCHRI----------------TDVYRAHAARVELGLPP 945
Query: 965 MLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHE 1024
+L D +Q +TIP+ F+ + LETLGDS LK LF + HE
Sbjct: 946 ILDDLLIQALTIPS-----------ANAGFNNQRLETLGDSVLKLTTVVHLFNRFPFRHE 994
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW--IIPGDNSGSYELNDDSLFN 1082
G L + +SN L E L ++ ES ++W + ++ S+ S+
Sbjct: 995 GQLDTLRRNSVSNRTLLARAKEVGLEEYLSCESQSMRVWRYTLAAEDDPSW-----SVEP 1049
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF- 1141
R+ + + +++ D +EA +GA +TGG + L +G+ + +P+ ++
Sbjct: 1050 RRRAH----RVFPRRSLQDCMEATLGAAFTTGGMGMALRAGTALGLSLGG-PLPWDIRYG 1104
Query: 1142 ----QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
+ L + L+ L Y FR LL+EA+TH S+ E YQRLEFLGDAV+
Sbjct: 1105 GCIPKSPVSALFTL--LQESLGYRFRSGRLLLEAMTHPSFNSFET-SSYQRLEFLGDAVV 1161
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINI 1256
D + YLYNK+P + G L+ RS +V A +VK GLHK +L + EL IN
Sbjct: 1162 DLAVMRYLYNKFPQATSGQLSWARSRAVCAPSLASVAVKRLGLHKLLLVNNVELSIAINN 1221
Query: 1257 TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
V E+LS PKA+ D++ES+ GA+ VDS N E+
Sbjct: 1222 YVPILEELSNEELIHNAWKQDPPKAISDVMESVLGAVLVDSDYNWEIA 1269
>gi|391348710|ref|XP_003748587.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1732
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 196/677 (28%), Positives = 310/677 (45%), Gaps = 108/677 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL---------RKPSPFVAV 72
AR+YQ+E E A K NTIV L TG+GKT I+++L++ + + R P +
Sbjct: 115 ARSYQVELFEYAKKHNTIVCLGTGTGKTFISVLLIKYLEHQVTGPWLDESGRTPVGKRTI 174
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
FL P V LV QQ+ + H +KVG Y G M D W W +E+ +H VLVMTP++
Sbjct: 175 FLAPNVPLVEQQSAVLACHMTVKVGTYVGSMNTDRWTSEHWNKELQEHGVLVMTPEVCRI 234
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ + L I +L+LDECH A G Y IM E Y L ++ PRI G+TAS +
Sbjct: 235 AVDHGFIPLENINLLVLDECHRATGVDPYVKIM-ENYKNL---NANDRPRILGLTASVVN 290
Query: 193 SKVSSSEQD-----------------YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA 235
++V S + +K+ DLE + S T + N + F T
Sbjct: 291 AQVPISIRSCDATSAHLIDILGARFPSREKVRDLEACLFSTARTAS-----HNVVRFGT- 344
Query: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
K EI + H A+++ I+ + L++ A RK + + T + C
Sbjct: 345 -----KPVEIIVSHEDHDAEKVLPIDEEKVALLKDC----ADFAEFRKMIKNLAKTYVSC 395
Query: 296 LSELGVWLALKAAETISCYESDFFAWEQLD----------GFGETIIKKFGSDASQALVT 345
G + A + E F +LD GF + K D +AL
Sbjct: 396 ----GAFCAKQLLE---------FRERELDKALNLPDCAEGFRDHAHVK--RDIYKALND 440
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQS 405
+ G + SI D + K+ L++ + ++ G + + ++FV+ + A VL
Sbjct: 441 FF--GPKPSIHD----------VPPKMKTLLQIIKQFEG-KTLSAVVFVQERLVAYVLYI 487
Query: 406 LLSELLPRHCTW---KTKYIAGNNSGIQCQ---------SRKKQNEIVEEFRRGLVNVIV 453
++ L R + +I G N G + + K Q +++ +FR G+ N++
Sbjct: 488 WMTH-LSREDEFSFVNCSFIVGQNQGAYGRDVDQESMKMNAKAQKKVMRDFRGGIYNLMF 546
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLE 512
ATS++EEG+DV +CNL++ FDP V S+ QS+GRAR + S Y+L+ + + T++ L+
Sbjct: 547 ATSVIEEGMDVPACNLIVRFDPPMDVRSYTQSKGRARAKPSLYVLLSSESELAKTKALLD 606
Query: 513 NYLASGNKMRKEVLSHASLPCSPLNNHMYGED----FYHVESTGTIATLSSSVSLIYFYC 568
+Y + + S P + + ED Y VE T S++S+I+ YC
Sbjct: 607 SYQETEQLVMHCCGIERSPPTASQSLEFLKEDPDLPPYVVEHARARITAQSAISVIHSYC 666
Query: 569 SRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQG-----NIKTLKQAACLE 621
+ Y P F + G ICTL +P CP++ ++ + K LE
Sbjct: 667 QQFMRMKYPNVFPFFDFEETAGGYICTLTMPIVCPLREKVSNATRPFESKDKAKMFVALE 726
Query: 622 ACKKLHQIGALTDNLLP 638
CK+LH G L+DNLLP
Sbjct: 727 MCKRLHACGELSDNLLP 743
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 221/495 (44%), Gaps = 90/495 (18%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA-A 1039
+++A+TTK QE F LE LE LGDSFL+ A+ + N L+V ++ ++N
Sbjct: 1198 IMKALTTKASQEVFDLERLELLGDSFLQIVATFSVLDRNPNMSISELNVLRQYEVNNRHL 1257
Query: 1040 LCK-----------------------LGC-----EQKL----------PGFIRTESFDPK 1061
LC+ LGC E+KL F E PK
Sbjct: 1258 LCRAHDKKLTSVLEAYPFKATHNFLPLGCRPIPHEEKLLRRDILCLLVQCFDYDEDLTPK 1317
Query: 1062 MWII-----------------PGD--NSGSYE-LNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
+ + P + Y L DD L + V K+K D
Sbjct: 1318 LKNLRHCKFIRRLLEKFAREQPSNLQEMAKYAFLQDDQLPLRHDVPVRSFHDFKAKVGGD 1377
Query: 1102 VVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVHAERLVNVR 1152
VVEAL G +L G L F IG+ + D + + + AE L + +
Sbjct: 1378 VVEALAGTYLEQCGPIGALRFFRWIGMDLGDTESNNFLDAFKLDFSAAQNIPAECLKSYQ 1437
Query: 1153 HL----ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
+L E ++++F+ L+++A+TH S + Y RL F+G+AV DYL+T+Y+Y
Sbjct: 1438 YLIEKVEKQIDFTFKSKGLVLQAITHHSCRDHLLTEDYNRLAFIGEAVADYLLTLYIYGL 1497
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK--LSL 1266
L PG L+D+RSA +NN A + V+ LH +L+ + +L+ I +++ + L L
Sbjct: 1498 SSNLDPGQLSDLRSALINNQVTAYAVVRAELHTVLLYTNSKLFSAIRKYLENIDDIGLRL 1557
Query: 1267 GSTFG-WESVTS----FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
+ G WE+ + P+ L I++S+ GA+F+DSG + F+S+ +L ++ E
Sbjct: 1558 NTVLGDWETDDAEEAEVPRPLARILQSILGAVFIDSGKS----FESVWRILVRIMGHEIA 1613
Query: 1322 RFH---PVRELTEYCQK---NHFSMKKPV-ASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
F P+ TE C+K FS P+ GK V + V NG+ ++ + +K
Sbjct: 1614 LFSRNVPIPPTTELCKKFPGTVFSKAVPILEGEDEGKFEVKLTVSRNGKTETYSQIAENK 1673
Query: 1375 KTAKKVACKEVLKSL 1389
K AK K L+ +
Sbjct: 1674 KIAKTTLAKRYLRKV 1688
>gi|348554455|ref|XP_003463041.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Cavia
porcellus]
Length = 1929
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 321/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV VPQQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVPQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCS 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALTFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDEDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFY-HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ +++ + + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 ADVDPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L ++L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIIGPPMSCVRLAERVVALICCEKLHKIGELDEHLMP 714
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1675 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1734
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1735 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1790
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1791 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1850
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1851 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1904
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1905 RIAKSAAARRALRSLKANQP 1924
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
Query: 1142 QVHAERLVNVRHLESLLNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLG 1193
QV +R+ + R S L YS R +P L+++ALT + L +RLE LG
Sbjct: 1269 QVLKDRMDSER--SSSLGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLG 1319
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
D+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1320 DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
>gi|149636857|ref|XP_001510982.1| PREDICTED: endoribonuclease Dicer-like [Ornithorhynchus anatinus]
Length = 1921
Score = 222 bits (566), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 209/714 (29%), Positives = 319/714 (44%), Gaps = 120/714 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDLNKNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E ++H+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEISASWTKEKWNQEFTQHQVLVMTCH 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM ++ E S PRI G+TA
Sbjct: 154 VALNVLKNDYLSLSDINLLVFDECHLAILDHPYREIM-----KICENYPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K +E + +KI LE ++ S T VL + +++ D P+A
Sbjct: 208 SILNGKCDPAELE--EKIQKLEKILKSSAETATDLVVLDRY----SSQPCEIVVDCGPYA 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L E+ + EL + N D N E + LI K+ I S L LG W
Sbjct: 262 DKSGLY-EILLKELDEALNFLN-DCNITVLSKERDSTLISKQ---ILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLDG------FGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSEL---LPRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTT-QSRLENYLASGNKMRKEV---LSHASLP 532
S++QS+GRAR S+Y+++ S T + L+ Y A +R + +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADSDKIVTFEEDLKTYKAIEKILRNKCSKSVDPGETE 600
Query: 533 CSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINK 587
P+ ++ ++ + T+++++ I YC+RLPSD + PK +
Sbjct: 601 TEPVVDDDDIFPPYVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD 660
Query: 588 EMGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I + + A L C+KLH+IG L D+L+P
Sbjct: 661 STFYSTLYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 139/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY+F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1667 NFERKINYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1726
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1727 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1782
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1783 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1842
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1843 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1896
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1897 RIAKSAAARRALRSLKANQP 1916
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|80979093|gb|ABB54749.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 249/1043 (23%), Positives = 436/1043 (41%), Gaps = 144/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVAAIADVHFEHWNKYGDSVTATVNKADKSKYRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSG 827
R + E YL++P + DW+ + P+ +GS N+ A G
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEG 872
Query: 828 PLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQ 884
+ T N + +T V L S +N T Y+ Y R G
Sbjct: 873 KIVTQWYANY-------DKRMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDV 925
Query: 885 LCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ D+ + L + F+V N + K +K+ L PELC P L +
Sbjct: 926 VHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--W 979
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A L+
Sbjct: 980 LKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHS 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|308237838|ref|NP_001184123.1| endoribonuclease Dicer [Sus scrofa]
gi|307715909|gb|ADN88174.1| dicer [Sus scrofa]
Length = 1915
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 219/719 (30%), Positives = 321/719 (44%), Gaps = 129/719 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWNQEFTKHQVLVMTCS 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLALSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNIAVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K AL G
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKV-----HALCE----------G 361
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S LD +T K++ L+E L +Y+ E
Sbjct: 362 HFSPAALDLRFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELLPRHCTW----KTKYIA 423
+I C IIFVER TA+VL L+ E + + +I
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSSNFIT 481
Query: 424 GNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 GHGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL 540
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V S
Sbjct: 541 PTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVES- 597
Query: 529 ASLPCSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN 586
P+ ++ ++ + G T+++++ I YC+RLPSD + PK
Sbjct: 598 GETDLEPVVDDDDIFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-T 656
Query: 587 KEMG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+E+ TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 657 RELPDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 715
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 171/371 (46%), Gaps = 80/371 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDFVNV--PYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+ + D P + F
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPAVKRTDRAQAACPARESFTSQ 1609
Query: 1145 AERLVNVR-------------------------------------------HLESLLNYS 1161
+ L R + E +NYS
Sbjct: 1610 QKTLSGGRPAAGSRSSGLKDLEYGCLKIPPRCMFDHPDADRTLSHLISGFENFERKINYS 1669
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+R
Sbjct: 1670 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1729
Query: 1222 SASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES----- 1274
SA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1730 SALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELRRS 1785
Query: 1275 --------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--H 1324
PKA+GDI ESLAGAI++DSG + EVV+Q P++ P+I +
Sbjct: 1786 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRS 1845
Query: 1325 PVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACK 1383
PVREL E + FS P GK VTVEV G+ + + AK A +
Sbjct: 1846 PVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAAR 1899
Query: 1384 EVLKSLRASFP 1394
L+SL+A+ P
Sbjct: 1900 RALRSLKANQP 1910
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1388
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1291 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1343
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1344 MRSKKVSN 1351
>gi|351701180|gb|EHB04099.1| Endoribonuclease Dicer [Heterocephalus glaber]
Length = 1935
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 322/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R P+
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSPNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E + H+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWNQEFTMHQVLIMTC 152
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S+ PRI G+T
Sbjct: 153 SVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPSS-PRILGLT 206
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
AS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 207 ASILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPF 260
Query: 248 ALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGV 301
+ L + L M EL+ + N D N E + LI K +I S L LG
Sbjct: 261 TDRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGP 315
Query: 302 WLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSI 355
W A K A + + EQ + F +T ++K + +
Sbjct: 316 WCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------ 363
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVE----------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 ---SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDEDE 420
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 421 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 480
Query: 424 GNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 481 GHGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL 539
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LS 527
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 540 PTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTG 597
Query: 528 HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK 587
+ ++ ++ + G T+++++ I YC+RLPSD + PK +
Sbjct: 598 ETDVDSVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTQE 657
Query: 588 ---EMGICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I ++ ++ L C+KLH+IG L ++L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDEHLMP 714
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1681 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1740
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1741 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1796
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1797 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1856
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1857 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1910
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1911 RIAKSAAARRALRSLKANQP 1930
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 43.1 bits (100), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
L YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 LGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|296809942|ref|XP_002845309.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
gi|238842697|gb|EEQ32359.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
Length = 1521
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 194/679 (28%), Positives = 315/679 (46%), Gaps = 106/679 (15%)
Query: 4 VSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA--- 60
+SM + ++ A + R YQLE E A ++N I L+TGSGKTLIA++LL+
Sbjct: 95 LSMTNIIAKQDYASIIHDPREYQLELFEKAKEKNIIAVLDTGSGKTLIAVLLLKHVIEQE 154
Query: 61 ---YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM 117
L +P P ++ FLV V LV QQA ++ + K+ K+ G M D W+ W+
Sbjct: 155 LADRSLGRP-PRISFFLVDSVTLVYQQAAVLQNNIAQKMDKFCGAMRTDLWNKEVWEGHF 213
Query: 118 SKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD 177
K+ V+V T ++L L S+ +++ I +LI DE HHA+ +H YA I+ +FY R E
Sbjct: 214 KKNMVIVCTAEVLHQCLLHSFIRISQINLLIFDEAHHAKKEHPYARIIKDFYMREPERK- 272
Query: 178 SNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKF 237
P+IFGMTASP+ +KV LET+++S++ T ++ S+L + + +
Sbjct: 273 ---PKIFGMTASPVDAKVQVV-----SAAKTLETMLDSQIATASNPSLLRQSV--ARPRE 322
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+ ++YD + T L +L R ++ K + KI S
Sbjct: 323 EIWEYDRLELPFETPLHSQLC-------RQFGDI-----------KVLEKIFKFSFETSS 364
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPS-------- 349
LG W C + W E + K + +++ ++ +PS
Sbjct: 365 ALGSW----------CSD-----WVWSYCLNEETLPKLEARSNKPIMKNLPSEPDRDRET 409
Query: 350 ---GAEWSIGDDSKFN---LDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIV 402
A +I D +F + LL+ K+ L LL ++ D RCI+F + TA +
Sbjct: 410 ERIRAAGAIVRDHEFGDPVTNPRLLSPKVQLLKNELLRRFKENPDTRCIVFTAQRHTARI 469
Query: 403 LQSLLSELLPRHCTWKTKYI----------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVI 452
L+ L ++ ++YI G+ G+ R++ ++ FR+G +N +
Sbjct: 470 LRDLFKKI-------GSQYIRPNLLVGVRSGGDRIGLDTSFREQFLNVI-AFRKGEINCL 521
Query: 453 VATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLE 512
ATS+ EEGLD+Q CNL++ FD T+ +IQSRGRAR S ++ MV+ + +S +E
Sbjct: 522 FATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHIESTFVHMVERNNLIHESVVE 581
Query: 513 NYLASGNKMRKEVLSH--ASLPCSPLNNHMYGED----------FYHVESTGTIATLSSS 560
+ +E+L SLP + L M D Y ++STG T SS
Sbjct: 582 EV-----RRAEEILVRFCKSLPENRLLKGMDDIDSILEKDRQRKSYTIKSTGAKLTYPSS 636
Query: 561 VSLIYFYCSRLPSDGYFKPTPKF--HINKEMGICTLYLPNNCPIQTVIAQGNIKTL--KQ 616
++++ Y S L + + H+ IC LP P++ + + + L KQ
Sbjct: 637 LAVLAHYASSLQYEKELSAQVSYVIHVKDGAFICEAILPEKSPVRGCMGKPASRKLLAKQ 696
Query: 617 AACLEACKKLHQIGALTDN 635
+A E C L + G L DN
Sbjct: 697 SAAFETCLILRKNG-LLDN 714
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 204/464 (43%), Gaps = 75/464 (16%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C +P+L I +N+L + K+ P + + + E +I P+ ++T F F
Sbjct: 961 CNWDQPVLRAELIQLRRNFLD-IDENKKGPP--VDYYICAEALKISSIPMPVATLI-FVF 1016
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH--------- 995
P+++ R++S L+A L+ C + + I LEA+T + H
Sbjct: 1017 -PAMISRMESYLIA-------LEACEKLQLKISPELALEALTKDSENTEEHGLEQIRFQS 1068
Query: 996 -----LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLP 1050
E LE LGD FLK A S LF +N E VK+ +I N L ++
Sbjct: 1069 GMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMLLICNQNLFNNAIILEVF 1128
Query: 1051 GFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR-KIYVTG--RKKVKSKTVADVVEALI 1107
+IR++SF + W G +L G+ K G + K++ADV EALI
Sbjct: 1129 KYIRSKSFSRRGWYPEGL----------TLLKGKDKKENPGGPTHALADKSIADVCEALI 1178
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESL---------- 1157
GA L GG + + + + FVN R ER + L SL
Sbjct: 1179 GASLLAGGPDHKFDMATK-AVTI-FVNSDDHR-----VERWADYSTLYSLTTYQTAAATA 1231
Query: 1158 ------------LNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITV 1203
L Y F+ P LL A H SY +P CYQRLEFLGD++LD
Sbjct: 1232 SEADVANQIEEKLGYRFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMACVN 1290
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
+L+ KYP P +LT+ + A V+N +V LH H++H S+ L +I + +
Sbjct: 1291 HLFTKYPDKDPQWLTEHKMAMVSNKFLGSLAVGLNLHVHLIHISNVLQGQITCYTEELQA 1350
Query: 1264 LSL---GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ + G+ W PK L DI+E+ GAIFVDS N +V+
Sbjct: 1351 MKMEMGGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVI 1394
>gi|431839251|gb|ELK01178.1| Endoribonuclease Dicer [Pteropus alecto]
Length = 1921
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 211/715 (29%), Positives = 319/715 (44%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDVSRLG 93
Query: 72 ---VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWSQEFAKHQVLVMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFM 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + + D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFVS-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSP 535
S++QS+GRAR S+Y+++ + + + L+ Y A +R + +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETE 600
Query: 536 LNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
+ + +D + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 601 IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 659
Query: 591 ----ICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I + + A L C+KLH+IG L D+L+P
Sbjct: 660 DGTFYSTLYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 171/374 (45%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVVKRTDRETATCPTRESFGSQ 1612
Query: 1145 AERLVNVR----------------------------------------------HLESLL 1158
+ L R + E +
Sbjct: 1613 QKSLSGGRAAACAASPRSPVFKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1672
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1788
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1849 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1902
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1391
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
Length = 1552
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 197/668 (29%), Positives = 305/668 (45%), Gaps = 103/668 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---------KPSPFVAVF 73
R YQ+E E A QNTI L+TGSGKTLIA++LLR ++L+ KP V+ F
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLLLR---HVLQNELNDRANGKPHR-VSFF 179
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LV V L QQA ++ + D V ++G MG D WD W+E + ++ V+V T +IL
Sbjct: 180 LVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQC 239
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L S+ ++N I +LI DE HH + H YA I+ + Y + PRIFGMTASPI +
Sbjct: 240 LLNSHVRMNQINLLIFDEAHHTKKDHPYARIIRDSY---FKASPPQRPRIFGMTASPIDT 296
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
K D LETL++S++ T + ++L + S K + YD + T+L
Sbjct: 297 K-----GDIIAAATRLETLLDSRIATTSKITLLRQVV--SRPIEKVWAYDRLESPFKTNL 349
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA-----A 308
+L + ++LE + Y SELG W + +A A
Sbjct: 350 -HKLMENRFGNVKALEG-----------------VFRFAWYASSELGRWCSDRAWLYALA 391
Query: 309 ETI---------SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
+ + ES A E+ F E + K S+ +A +D
Sbjct: 392 DDVLPKLEGHVNKLAESTAAATERDMAFKEITLIKEASNIVKA-----------HTFNDP 440
Query: 360 KFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+F G L+ K+ L L + + + +CIIF ++ TA L L + L H
Sbjct: 441 EF---PGELSPKVRLLQTELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILSIPHLRPG 497
Query: 419 T--KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+G+ G+ R++ +V +FR+G +N + ATS+ EEGLD+ CNLV+ FD
Sbjct: 498 VLIGVRSGDIGGMNITFRQQFLALV-KFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLY 556
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--------EVLSH 528
T+ ++QSRGRAR +S Y MV+ +S ++RL + M+ +L
Sbjct: 557 HTLIQYVQSRGRARHYHSTYASMVEKDNSDHEARLREVREAEKTMQNFCETLPEDRILHG 616
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS-----------DGYF 577
L H G + V+STG T S+++++ Y S L D +
Sbjct: 617 NDHDLDSLLQHEEGRRTFTVKSTGARLTYHSAIAILARYASSLVRSSNHALMASYIDNTW 676
Query: 578 K-----PTPKF-HINKEMG---ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKL 626
K TP+ ++ + +G +C + LP PI+ + I+ KQ+A + C L
Sbjct: 677 KQYEKETTPQATYVVQSVGNTYVCEVILPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLL 736
Query: 627 HQIGALTD 634
+ L D
Sbjct: 737 RRHKLLDD 744
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 219/485 (45%), Gaps = 88/485 (18%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQK---------EPSKISFELPPELCRIIMAPIS 936
C +P+L + +N L K +++K EP KIS +PP + +A
Sbjct: 990 CHWDQPVLQAELVRLRRNLLDKLTTEEKKIQTECFICAEPLKIS-AIPPSIASTCLA--- 1045
Query: 937 LSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH- 995
P+I+ RL S L+++ + L ++ I + LEA+T + H
Sbjct: 1046 ---------FPAIITRLDSYLISIEACDEL------DLVIRSDYALEAVTKDSDNTEEHR 1090
Query: 996 -------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
E LE LGD FLK A S LF ++ E V + +I N L
Sbjct: 1091 GQQIHFQRGMGKNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFN 1150
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR----KIYVTGRKKVKSKT 1098
++++ +IR+ SF +W G +L G+ K+ + + KT
Sbjct: 1151 TAKKRQIYRYIRSRSFSRHVWYPDGL----------TLLQGKDHSKKMLSQAKHALGEKT 1200
Query: 1099 VADVVEALIGAFLSTGGE----NVGL----IFLDRIGIKV----DFVNVPYQRQFQVHAE 1146
+ADV EALIGA L +GG ++G+ +F+D V +++ + +QV
Sbjct: 1201 IADVCEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKA 1260
Query: 1147 RLVNVR---HLESLLNYSFRDPSLLVEALTHGS------YMLPEIPRCYQRLEFLGDAVL 1197
+E L Y FR P LL A+TH S + +P CYQRLEFLGD++L
Sbjct: 1261 EGAETNLALQVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVP----CYQRLEFLGDSLL 1316
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
D + L++++P P +LT+ + A V+N +VK G HKHI S+ L +I
Sbjct: 1317 DMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYY 1376
Query: 1258 VDSFEKL---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV---FQS-IRP 1310
V+ E S G+ W PK L D++E+ GAIFVDS + EV+ FQ+ I+P
Sbjct: 1377 VEEIETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKP 1436
Query: 1311 LLEPM 1315
+ M
Sbjct: 1437 YFQDM 1441
>gi|388857965|emb|CCF48410.1| related to cell cycle control protein dicer [Ustilago hordei]
Length = 1752
Score = 221 bits (564), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 289/1098 (26%), Positives = 468/1098 (42%), Gaps = 162/1098 (14%)
Query: 369 TEKIVCLIESLLEYRGVEDIRC-IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN-- 425
+ K++ LIE L + + C IIFVER TA +L L+ + P +++ G+
Sbjct: 510 SPKLLRLIELLHCFEPSKSSFCGIIFVERRQTATLLVELVKRI-PGLEFIHPEFLLGHDN 568
Query: 426 ---NSGIQCQSRKKQNEIVEEFRR-GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
N G Q +++ FRR N+++ATSI EEGLD+Q+ NLVI FD S
Sbjct: 569 GAANGGAPGMDWHDQVQVLNRFRRRKPTNLLIATSIAEEGLDIQAANLVIRFDLFNRHIS 628
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
F+QSRGRAR + S ++LM + G+ + N + R + L + P + + +
Sbjct: 629 FLQSRGRARAKESRFILMAEKGNQEHAGTILNAFKT-EANRAKWLDGIAEPHLAMPD--W 685
Query: 542 GEDFYHV------------------------ESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
GED+ +TG + +L+ Y + L S+
Sbjct: 686 GEDWQQKLRIDTDSQEGVGVEGGEEEKCMFEPTTGARLFPEDAPTLVSHYAASLHSEYLK 745
Query: 578 KPTPKFHINKEMGI----CTLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKLHQIGA 631
+ I K G+ L LP+ +++V + G + K K+ A AC++L +G
Sbjct: 746 DAVLAYRIEKVDGLPSYKAVLELPSTAAVRSVESDGCRSKKAAKRMAAFRACQQLRALGE 805
Query: 632 LTDNLLPDIVVEKHDAQKRGNEPYNAEH--------PIYFPPELVNQSPQDTKITYHC-- 681
L + L+P +V A+ NA H PI P + ++ + +H
Sbjct: 806 LDEWLMPKLVPRLKKAKDGVVGLVNAHHQAWRGSGKPINVPSKKLDGWARFASSHHHAMG 865
Query: 682 --YLIELKQHFNYDISARNIVLAMRTEL-ESEIKKVNFDLEVERGRLTVNLKHLGRIQLI 738
+ L Q +D ++L R L E+++ K+ + G + H +++
Sbjct: 866 QGWCATLLQLDKFDEGYEPLLLLTRGPLPETKLLKL-----LHAGSGQMKDLHPKPLRIA 920
Query: 739 P--NQVLLCRRFQIT--LFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLIDWK 794
P + L+ + + T +F++I + ++ + + L+LP + +
Sbjct: 921 PELDSELIGKVVEFTKFVFKLISRKDGHSPKGKRLSWQTIEKGQPTVLVLPVRIAAEEVQ 980
Query: 795 TVATVL--FPRD----------NGSKHNMNCSTMFNARIVHTKS--------GPLCTCKI 834
+V V FP GS+ + T+ H+ S LC
Sbjct: 981 SVGDVALDFPPSLDLTQLDLNAEGSEQKLKGRTLVKQHGYHSHSLYQFESIRSDLCP--- 1037
Query: 835 HNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN 894
NS + + G+ Y H+ ++ R+ S +H E QL +PLL+
Sbjct: 1038 -NSPLSSGAAGETYLTQ----HMK---MYARHQASA---DEHEVEVLAAQLA--NQPLLS 1084
Query: 895 GRRIFHVQNYLSKCRQQKQKEPSKISFELPP---ELCRIIMA------PISLSTFYSFTF 945
R++ + N LS P ISF P + R+I+ P+ + S
Sbjct: 1085 VRKLPKISNLLSP--------PPSISFSATPATTQGARLIVPYFYALHPLPSTLLRSILL 1136
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+PSI R LLLA N LL+ + N KVLEA+T+ F E LE LGD+
Sbjct: 1137 LPSIFTRYDQLLLAQACNNDLLEGRLDN-----DKVLEALTSPSAGSAFDYERLEFLGDT 1191
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK----LGCEQKLPGFIRTESFDPK 1061
FLK A+ F T+ E L + + I++N L K LG E+ + + + P+
Sbjct: 1192 FLKLIATCHTFTTHLGRTEAELHMANKGIVTNVRLLKEAKRLGLEKY--AILPSCNLLPR 1249
Query: 1062 MWIIPGD-NSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA---FLSTGGEN 1117
+ P N G ND S+ + ++ V VK KT++D+VE+LIGA S+ +
Sbjct: 1250 RFTAPVICNVGGALTNDPSMDHDGQVDV-----VKEKTLSDIVESLIGAALLSPSSSSPS 1304
Query: 1118 VGLIFLDRIGIKVDFVNVPYQRQFQVHAERL--VNVRHLESLLNYSFRDPSLLVEALTHG 1175
F + V +QR + + RL ++RHL+SL ++++R P L +E+ TH
Sbjct: 1305 SSSPFFLLPFLSFLHVYCAFQRNW---SSRLNPPSLRHLQSLFSHTYRYPHLALESFTHP 1361
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG---LSPGYLTDMRSASVNNDCYAL 1232
S + +P YQRLEFLGDA +D+ I +Y + G L PG +T ++ +N +
Sbjct: 1362 SLLASILP-SYQRLEFLGDAWIDFFIVSRIYTEGGGLVVLDPGEMTALKGVLASNAALSA 1420
Query: 1233 SSVKHGLHKHILHASHELYKRINITVDSFEK-LSLGSTFG--W--ESVTSFPKALGDIIE 1287
VK GLHK I S L + I EK L G G W + PKA+ D++E
Sbjct: 1421 LGVKLGLHKFIASNSAVLVESIAKYGKGLEKVLRKGGGEGQYWTKAGMVQVPKAVADVVE 1480
Query: 1288 SLAGAIFVDSGCNREV---VFQSI-RPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKP 1343
+ +I VDSG +++ VF I P + E +R V+ + EY
Sbjct: 1481 ASFASIVVDSGFDQDTAQRVFGRIFTPFYDEHCKWEDLRVGEVKRVIEYLSS-------- 1532
Query: 1344 VASRISGKAAVTVEVQAN 1361
R G V +EV N
Sbjct: 1533 CFKRRGGGGGVMLEVSTN 1550
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 173/372 (46%), Gaps = 61/372 (16%)
Query: 9 DTTEEVSADTLP-FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR---------- 57
D ++++ +D L R+YQLE E A N +V L+TGSGKTLI+++LL+
Sbjct: 68 DPSDQLRSDQLATVPRSYQLELAELAKAGNVLVCLDTGSGKTLISVLLLQYVHQHSSPPP 127
Query: 58 -------SYAYLLRKPSP--FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDM----- 103
S A P+P VA FLV V LV QQ+ I ++ L VGK +G++
Sbjct: 128 TPSLAPSSGAQPFSSPAPQRKVAFFLVNLVPLVHQQSSVIAGNSRLSVGKLYGELKDSLR 187
Query: 104 ------GVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARG 157
VD W W ++ H+V+V T Q LD L + K++ + +LI DE HHA
Sbjct: 188 SKSSQLAVDDWRSPQWSALLASHQVIVSTAQCFLDALIHGFIKMSDLNLLIFDEVHHALK 247
Query: 158 KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKV 217
H + IM Y+RL + + P+IFGMTASPI + + + L+ M++++
Sbjct: 248 NHPFFRIMK--YYRLAK--EEERPKIFGMTASPI----FTGSGRFDEASQYLQRAMDARI 299
Query: 218 YTCA-------------SESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKH 264
+T + E ++ F P+ T + + D + Y+ L+ E MIEL
Sbjct: 300 HTVSRGALRELEEVKRRPEEMVVEFEPYLTVVDEPWNADAVK---YSELSME--MIELFS 354
Query: 265 TR-SLE-NLDLNEAQAELIRKKVSK-INSTLLYCLSELG-VWLALKAAETISCYESDFFA 320
+ LE LD E + + + + K + L Y + LG + T+ Y S
Sbjct: 355 KKVDLEICLDDEEEEVDPLTEAFEKEVRPKLEYTMRHLGPIGCDFFWHSTLLEYRSRARK 414
Query: 321 WEQLDGFGETII 332
W +D T++
Sbjct: 415 WANIDRNQRTLV 426
>gi|410928196|ref|XP_003977487.1| PREDICTED: endoribonuclease Dicer-like [Takifugu rubripes]
Length = 1883
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 206/710 (29%), Positives = 326/710 (45%), Gaps = 113/710 (15%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL+ NTIV L +GSGKT IA++L + ++ +R + +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALEHNTIVCLNSGSGKTFIAVLLTKELSHQIRGCYREAA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V +QA A++ H+DL+VG+Y D+ W W +EM++++VLVMT
Sbjct: 84 KRTVFLVNTAASVAEQAAAVRTHSDLQVGEY-SDLEKMTWTDQRWSQEMTENQVLVMTCH 142
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L L+ L+ I +++ D+CH A H Y IM F G +N PRI G+TA
Sbjct: 143 IFLYILKRQILLLSKINLVVFDDCHLAIADHPYCEIMKYF------EGVTNSPRILGLTA 196
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K SE + +KI +LE + S T VL + ++ + D P+
Sbjct: 197 SILNGKCDPSELE--EKIQNLERTLKSNAETATDLVVLDRY----ASQPREMVLDCGPYV 250
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSELGVWLALKA 307
+ L L + R L + ++ + + +SK + + L L LG W A KA
Sbjct: 251 DKSGLCSRLQAELDEALRFLGDCNICVTREDHNPTFISKQVLADCLAVLQVLGPWCADKA 310
Query: 308 AETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
A + + EQ + F +TI++K + + S
Sbjct: 311 AGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHF---------------SPT 355
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVE----------------------------------- 386
+LD +T K++ L+E L EY+ E
Sbjct: 356 SLDLKFVTPKVLRLLEILREYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEDVEA 415
Query: 387 -------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSG- 428
+I C IIFVER TA+VL L+ E P + +I G++ G
Sbjct: 416 KERPEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGK 475
Query: 429 IQCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
Q +++ +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S+
Sbjct: 476 YQLRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSY 535
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTT-QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
+QS+GRAR S+Y+++ S + + L Y A +R + S+ S
Sbjct: 536 VQSKGRARAPVSNYIMLADSERTKVFKEDLSTYKAIEKILRNKC--SKSVEVSEFEVEQV 593
Query: 542 GEDFYHV-------ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK---FHINKEMGI 591
+D Y + E G T+++++ I YC+RLPSD + PK I +
Sbjct: 594 FDDDYIIPPYVLRSEDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPKCKTVEIQSGLFQ 653
Query: 592 CTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
LYLP N P++ + I+ ++A L C+KLH+IG L D+L+P
Sbjct: 654 SRLYLPINSPLRIPVKGPIMNCIRLAEKAVALLCCEKLHKIGELDDHLMP 703
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 172/350 (49%), Gaps = 60/350 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEEGVVTGPRRSHGTTAVDLC 1599
Query: 1131 -DFVNVPYQRQFQVHAERLVNVRHL-------ESLLNYSFRDPSLLVEALTHGSYMLPEI 1182
++ +P R H + + HL E +NY+F++ + L++A TH SY I
Sbjct: 1600 YGWLKIP-PRSMLDHPDAEHTLHHLISGFENFERKINYTFQNKAYLLQAFTHASYHYNTI 1658
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 1659 TDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKY 1718
Query: 1243 ILHASHELYKRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDIIE 1287
S EL+ +D F + L G +S PKA+GDI E
Sbjct: 1719 FKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFE 1774
Query: 1288 SLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFSMKKPV 1344
SLAGAI++DS + E V+Q P++ P+I + PVREL E + FS P
Sbjct: 1775 SLAGAIYMDSRMSLETVWQIYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS---PA 1831
Query: 1345 ASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1832 ERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1878
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1263 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1322
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG + N+D L
Sbjct: 1323 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYIVNQEKSNNDKL 1363
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1279 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1319
>gi|195150547|ref|XP_002016212.1| GL10619 [Drosophila persimilis]
gi|194110059|gb|EDW32102.1| GL10619 [Drosophila persimilis]
Length = 1720
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 208/823 (25%), Positives = 366/823 (44%), Gaps = 103/823 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N I++L TGSGKT +AI+ L+ ++ + K A+F+ V
Sbjct: 9 RSYQLRLVDHITKNNGIIYLPTGSGKTYVAILALKRFSKDMDKSIEEGGKRAIFMCNTVE 68
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ ++LKVG + G+ GVD W W E+S +VLV T Q++L+ + Y
Sbjct: 69 LARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVGTAQVMLNMVTQKYL 128
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+L+ + ++I+DECHH G H Y M F LL ++ LPR+ G+T IK +
Sbjct: 129 ELSSVSIVIIDECHHGTGHHPYHEFMHLF---LLADRNTPLPRVVGLTGVLIKG---NEF 182
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK-FYKYD------EIPHALY-- 250
+ QK+ +LET S + T + L N + +ST + Y EI HA++
Sbjct: 183 KLVAQKLRELETTYRSNIITVSDTEELKNVMLYSTKPRECLVTYPNQVGSLEIGHAIHRC 242
Query: 251 -THLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
H L +E+ + + L+ + + + + + Y L GV+ A A
Sbjct: 243 IEHFYVRLDDLEIGKQPTRYSKGLSTLRDPHKKGYIKTLLNDFQYQLENYGVYAAAMAIV 302
Query: 310 T------ISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
+ I ++S+ A + + + + L V E DD+
Sbjct: 303 SVILEFEIKLHQSETLALTHIYKLAICMCNRINHMLKKKLRDLVDDDTE---PDDAVHTE 359
Query: 364 D-----SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ S ++ + ++ + +DI C++FVER T+ + LL + + +
Sbjct: 360 ETIINFSTPKVQRFLHYVQKTFSGKNAKDICCLVFVERRYTSKCIYQLLKKFIAAIPALR 419
Query: 419 T----KYIAGNNS-GIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+++ G NS C+S RK Q + +FR G N++V +S+LEEG+DV++CN V
Sbjct: 420 DVLVPQFMVGRNSVSADCESVLERKWQKSAIHQFRDGEANLMVCSSVLEEGIDVKACNYV 479
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLM------VKSGDSTTQSRLENYLASGNKMRKE 524
++ DP +T ++Q++GRAR +++ ++L +K+ Q R + + G ++
Sbjct: 480 LILDPIKTFNMYVQTKGRARSKDAQFVLFSSDLDRIKTNQQINQYR-QAHTDIGEYLKDR 538
Query: 525 VLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH 584
VL A + +H + + G + SS++ L++ YC LPSD + P F
Sbjct: 539 VLDRAEPLMQEIADHFHELIPPFINEKGAVLLPSSALILLHRYCQSLPSDAFGFVEPWFT 598
Query: 585 I-----NKEM--------GICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQ 628
+ +E+ ++ LP + ++ + ++K K +A + C KL+
Sbjct: 599 LISWDQKRELFGTQAASKEFVSIELPLSSSVRDIFYSDPMTSVKAAKISAAFKTCIKLYS 658
Query: 629 IGALTDNLLP----------------------DIVVEKHDAQKRGNEPYNAEHPIYFPPE 666
G L + LP D V++ + QK E P E
Sbjct: 659 TGELNERFLPVTLKDRVTAIADFHFDHWKKYSDDVIDTVNKQKLKPET-QTTLKTSCPTE 717
Query: 667 LVNQSPQDTKITYHCYLIELKQHFNYD----------ISARNIVLAMRTELESEIKKVNF 716
+ P+ ++ Y Y I L+ F + +S RN L +R +L K F
Sbjct: 718 FYDCRPRVGEVCY-AYEIILEPQFERNDYTEHIHDNMLSGRNFALLLRKQLPPLSKMPLF 776
Query: 717 DLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIM 757
+G L V ++ R +I N Q+ +F LFR ++
Sbjct: 777 ---CNQGPLHVQVREHPRELVIANAEQLEQLHQFHGMLFRDLL 816
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 193/461 (41%), Gaps = 112/461 (24%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AITT + + +E E LGDSFLK +AS L Y + +EG L+ K R++SN L
Sbjct: 1203 LAAITTAGSADVYDMERAELLGDSFLKMSASLYLASRYPDWNEGTLTQVKSRLVSNKNLM 1262
Query: 1042 KLGCEQKLPGFIRTESFDPKM-WIIPG-----------------------DNSGSYELND 1077
E +P I FDP++ W+ P N L+D
Sbjct: 1263 YCLRETDIPSRISCSLFDPRLTWLPPSINLPEDVLDVWTEQPSFAKLIGPHNLFDLALSD 1322
Query: 1078 DSLFNGR-----------------KIYVTGRK------------KVKSKTVADVVEALIG 1108
+ + GR + Y GR V++K VAD +EAL+G
Sbjct: 1323 EEILAGRCNEDTYRRFVHGCKSNQQGYYAGRDFSSGVNYFFGEVTVQNKVVADTLEALLG 1382
Query: 1109 AFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVRH 1153
+ G G L+ GI V+ P + + + L+N +
Sbjct: 1383 VIVRNYGLQHGFRMLEYFGICKPEVDKPLSQLLDLQLKSTKMRANASPGDIDGFLINHSY 1442
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE L Y FRD L++ALTH S+ + CYQ LEF+GDA+LD+LI+ Y++ L
Sbjct: 1443 LEQNLGYKFRDRGYLLQALTHPSFPTNRLTGCYQELEFIGDAILDFLISAYIFENNTKLR 1502
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV--------------- 1258
PG LTD+RSA VNN V+H LH IL + L + I+ V
Sbjct: 1503 PGELTDLRSALVNNTTLGCICVRHKLHLFILAENALLSETISKFVKFQESQGHRVTNHVR 1562
Query: 1259 -------------------------DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAI 1293
DS + +G+ F PKALGD++E+L A+
Sbjct: 1563 FLLEERDVQPVILDLDDEVEMAMENDSEDGPPIGA-FNLAQNVDVPKALGDVLEALIAAV 1621
Query: 1294 FVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEY 1332
++D + + +Q I L EP + + + P+R+L E+
Sbjct: 1622 YMDCR-DLQTTWQMIYHLFEPELKEFSQNIPISPIRQLHEH 1661
>gi|119602001|gb|EAW81595.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1923
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1669 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1728
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1729 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1784
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1785 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1844
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1845 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1898
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1899 RIAKSAAARRALRSLKANQP 1918
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1391
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1284 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1336
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1337 PDAHEGRLSYMRSKKVSN 1354
>gi|426248555|ref|XP_004018028.1| PREDICTED: endoribonuclease Dicer [Ovis aries]
Length = 1922
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 213/716 (29%), Positives = 318/716 (44%), Gaps = 125/716 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R S
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRSG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VLVMT
Sbjct: 94 RRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVTASWTKEKWNQEFTKHQVLVMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T V+ + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILRSNAETATDLVVVDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+ +++ + G T+++++ + YC+RLPSD + PK +E+
Sbjct: 599 ADTEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCR-TREL 657
Query: 590 G----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I I+ ++ L C++LH+IG L D+L+P
Sbjct: 658 PDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCERLHKIGELDDHLMP 713
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 175/375 (46%), Gaps = 85/375 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVN- 1134
+ K++AD VEAL+G +L++ GE +FL +G+KV +F +
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1613
Query: 1135 ------------------------------VPYQRQFQVHAERLVNVRHL-------ESL 1157
+P + F H + +RHL E
Sbjct: 1614 QKNLSGSRTAASGAGYRASVLKDLEYGCLKIPPRCMFD-HPDADRTLRHLISGFENFEKK 1672
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG L
Sbjct: 1673 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1732
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES- 1274
TD+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1733 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSE 1788
Query: 1275 ------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I +
Sbjct: 1789 LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSAN 1848
Query: 1323 F--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKK 1379
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1849 VPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKS 1902
Query: 1380 VACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1903 AAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|80979095|gb|ABB54750.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 250/1056 (23%), Positives = 435/1056 (41%), Gaps = 170/1056 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQL +++ K N IV+L TGSGKT +AI++L+ ++ KP A+F+ V
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ T+ KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H + EF + LPR+ G+T IK +
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT-- 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ K+ +LE + T + + N + ++T + PH L
Sbjct: 176 -NVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLIS 232
Query: 260 IELKHTRSLENLDLNEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA- 304
E++ + +LDL + IR+ V ++ + LY + E G++ A
Sbjct: 233 AEIE--KFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 305 -----LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L I +++ + + + T+ +K Q L + ++ +
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEE 350
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RH 414
S ++ + ++ + +DI C++FVER T + LL + R+
Sbjct: 351 VIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRN 410
Query: 415 CTWKTKYIAGNNSGIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ NN +S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V
Sbjct: 411 VLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVF 470
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEV 525
+ DP +T ++QS+GRAR + ++L K + T Q ++ Y + N ++ V
Sbjct: 471 ILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRV 529
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + H + G + ++++++++ YC +P+D + P FH+
Sbjct: 530 LEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 589
Query: 586 NKE-------------MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQI 629
+E + ++ +P NC ++ I N+KT K +A +ACK L+ +
Sbjct: 590 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSL 649
Query: 630 GALTDNLLPDIVVEK-----------------------HDAQKRGNEPYNAEHPIYFPPE 666
G L + +P + E+ + A K + Y E P+ E
Sbjct: 650 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----E 705
Query: 667 LVNQSPQDTKITYHCYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFD 717
+ P+ +I Y + E +H ++ + RN + +R +L +
Sbjct: 706 FYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMP 762
Query: 718 LEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFEL 773
L +G+L V + + +I N Q+ L +F +FR I+ H L+
Sbjct: 763 LFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD-------- 814
Query: 774 RDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTM----------FN 818
R + E YL++P + DW+ + R H N F
Sbjct: 815 RRSKENSYLVVPLILGAGEQKCFDWELMTNF---RRLPQSHPSNVQQREQQPAPRPEDFE 871
Query: 819 ARIV----HTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK 874
+IV P+ K+H L TP S +N T Y+
Sbjct: 872 GKIVTQWYANYDKPMLVTKVHREL--TPL-----------------SYMEKNQQDKTYYE 912
Query: 875 ---KHYEERYGIQLCFDREPL----LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPEL 927
Y R G + D+ + L + F+V N + K +K+ L PEL
Sbjct: 913 FTMSKYGNRIGDVVHKDKFMIEVRDLTEQLTFYVHNR----GKFNAKSKAKMKVILIPEL 968
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
C P L + F+PSI++R+ LL A L+
Sbjct: 969 CFNFNFPGDL--WLKLIFLPSILNRMYFLLHAEALR 1002
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1188 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1247
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1248 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGD 1307
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1308 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1367
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1368 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHF 1427
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1428 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1487
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1488 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1547
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1548 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1607
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1608 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1659
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1660 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1710
>gi|440907259|gb|ELR57423.1| Endoribonuclease Dicer [Bos grunniens mutus]
Length = 1922
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 214/716 (29%), Positives = 318/716 (44%), Gaps = 125/716 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+ +++ + G T+++++ + YC+RLPSD + PK +E+
Sbjct: 599 ADTEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCR-TREL 657
Query: 590 G----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 658 PDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 175/375 (46%), Gaps = 85/375 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVN- 1134
+ K++AD VEAL+G +L++ GE +FL +G+KV +F +
Sbjct: 1554 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1613
Query: 1135 ------------------------------VPYQRQFQVHAERLVNVRHL-------ESL 1157
+P + F H + +RHL E
Sbjct: 1614 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFD-HPDADRTLRHLISGFENFEKK 1672
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG L
Sbjct: 1673 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1732
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES- 1274
TD+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1733 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSE 1788
Query: 1275 ------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I +
Sbjct: 1789 LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSAN 1848
Query: 1323 F--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKK 1379
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1849 VPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKS 1902
Query: 1380 VACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1903 AAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.0 bits (97), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|332223646|ref|XP_003260983.1| PREDICTED: endoribonuclease Dicer isoform 1 [Nomascus leucogenys]
gi|332223648|ref|XP_003260984.1| PREDICTED: endoribonuclease Dicer isoform 2 [Nomascus leucogenys]
gi|441666339|ref|XP_004091884.1| PREDICTED: endoribonuclease Dicer [Nomascus leucogenys]
Length = 1922
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|426377909|ref|XP_004055696.1| PREDICTED: endoribonuclease Dicer isoform 1 [Gorilla gorilla
gorilla]
gi|426377911|ref|XP_004055697.1| PREDICTED: endoribonuclease Dicer isoform 2 [Gorilla gorilla
gorilla]
gi|426377913|ref|XP_004055698.1| PREDICTED: endoribonuclease Dicer isoform 3 [Gorilla gorilla
gorilla]
Length = 1922
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|29294649|ref|NP_085124.2| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|29294651|ref|NP_803187.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|404312696|ref|NP_001258211.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|257051056|sp|Q9UPY3.3|DICER_HUMAN RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with
RNase motif; Short=Helicase MOI
gi|20521696|dbj|BAA76772.2| KIAA0928 protein [Homo sapiens]
gi|119602002|gb|EAW81596.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Homo sapiens]
gi|152012889|gb|AAI50288.1| Dicer 1, ribonuclease type III [Homo sapiens]
gi|307685563|dbj|BAJ20712.1| dicer 1, ribonuclease type III [synthetic construct]
Length = 1922
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|397525875|ref|XP_003832878.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pan paniscus]
gi|397525877|ref|XP_003832879.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pan paniscus]
Length = 1922
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|429137921|gb|AFZ74931.1| dicer 2 [Aphis glycines]
Length = 1628
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 314/667 (47%), Gaps = 93/667 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQLE LE+ K NTI++L TGSGKT IA ML+++ L KP F+V V
Sbjct: 14 RKYQLELLEDVKKSNTILYLPTGSGKTYIATMLVKNLGDCLTKPIGHGRKWTFFIVQSVP 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ H +G + GDM VDFW W E + K +LVMT QI L+ L Y
Sbjct: 74 LVAQQANNLRRHLPWSIGTFSGDMNVDFWSQKHWDEILEKCHILVMTAQIYLNNLHHGYM 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-----PRIFGMTASPIKSK 194
+ +LI DECHHA H + IM + DSNL P I G+TA+ I S
Sbjct: 134 HIKDANLLIFDECHHAVALHPFKQIMQVLH-------DSNLNIDERPHILGLTATLINSN 186
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK-YDEIPHALYTHL 253
+ + + + L+ N+ + T E N FS +F YDE L
Sbjct: 187 TKNVKDE----LTKLQNTFNATIKTKYDE----NIQIFSARPEEFISLYDEYI------L 232
Query: 254 ADELAMIELKHTRSLENLDLNEAQAE------------LIRKKVSKINSTLLYC-----L 296
DE+ I + ++ +++L +A A+ L +K S N + L
Sbjct: 233 DDEMVAITQRISKIVDHLKKFQAPAKIEPIKENNEVYYLENQKQSSKNFANYFLDIEVNL 292
Query: 297 SELGVWLALKAA---------ETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV 347
S+ G ++A A + C +S + TII+K D Y+
Sbjct: 293 SDGGPYIAFLATWHFIVEIEKKRKICTDSKNHTIMSMVLSEVTIIRKLVFD-------YM 345
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
+ + G + N ++ K+ L+E L + + C++FV+R TA +L +
Sbjct: 346 NKHSSINNGHSTTLN----NVSPKLKKLMEILSSIKATD--TCLVFVDRRTTAKILYHYI 399
Query: 408 SELLPRHCTWKT--KYIAGNNSGIQCQSR----KKQ--NEIVEEFRRGLVNVIVATSILE 459
+ + + ++I G I S+ KKQ N+I+++F ++NV++ + +LE
Sbjct: 400 KDFIQEYNQENIVCEFIVGARGIISPDSKEMVYKKQQNNDIIKKFNDNIINVLITSEVLE 459
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EG+D+Q+CN VI +D + S++QS+GRAR +S +++MV + Q + E + N
Sbjct: 460 EGVDIQTCNYVIRYDSPKNFPSYVQSKGRARSADSKFIIMVPN-----QLKFEKTQSDYN 514
Query: 520 KMRKEVLS--HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
KM +E++ + N+ E F ++ I T ++S+I YC LP D +
Sbjct: 515 KMEEEIVKILVDNDIDDENNDENMTEVF---KTKHAILTHDVAISIINRYCFSLPQDRFT 571
Query: 578 KPTPKFHI---NKEMGICTLYLPNNCPIQTVIAQ---GNIKTLKQAACLEACKKLHQIGA 631
+P+++I N + L LP N I+T I + K K++A AC +L+++GA
Sbjct: 572 DLSPEWYIAQNNNKFKKYKLKLPINSVIKTPIDGIFCASKKNAKKSAAFNACIELYKVGA 631
Query: 632 LTDNLLP 638
L + LLP
Sbjct: 632 LDEYLLP 638
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 140/277 (50%), Gaps = 25/277 (9%)
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PYQRQFQ--V 1143
++ V K VAD VE+LIG ++ G VG L +GI F++ P + +
Sbjct: 1304 KQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDAFKPKPIENIYNDLS 1363
Query: 1144 HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA+LD+LIT
Sbjct: 1364 FSKVLPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-YTECYQRLEFLGDAILDFLITT 1422
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
Y+ +PG +TD+RS+ VNN +A S + GLH+ IL S ++ + I+ + +K
Sbjct: 1423 YIIQHCYQKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAIDRFYEHQQK 1482
Query: 1264 ------------LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
+ + ESV PK LGD+ ESL AI++D G + V+
Sbjct: 1483 NNHKIGQEILYLIEESDCYAAESV-DVPKVLGDLFESLIAAIYLDCGRDLNFVWTFCYRF 1541
Query: 1312 LEPMITP--ETMRFHPVRELTEYCQKNHFSMKKPVAS 1346
LE I + +P+R L E + +FS KP AS
Sbjct: 1542 LENEINEFCTNVPKNPIRILHETKLQPNFS--KPDAS 1576
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+AIT + F+ E +ET GDSFLK+A S LF + +++EG+L+ K +I+ N L
Sbjct: 1135 ILKAITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKIVGNRNL 1194
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIP 1066
+G L ++ FDP M WI P
Sbjct: 1195 FYVGRNLNLGSYLTVNVFDPNMDWIPP 1221
>gi|42733596|ref|NP_976235.1| endoribonuclease Dicer [Bos taurus]
gi|257051053|sp|Q6TUI4.3|DICER_BOVIN RecName: Full=Endoribonuclease Dicer
gi|38679195|gb|AAR26432.1| dicer [Bos taurus]
Length = 1923
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/716 (29%), Positives = 318/716 (44%), Gaps = 125/716 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+ +++ + G T+++++ + YC+RLPSD + PK +E+
Sbjct: 599 ADTEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCR-TREL 657
Query: 590 G----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 658 PDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 174/374 (46%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVN- 1134
+ K++AD VEAL+G +L++ GE +FL +G+KV +F +
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1614
Query: 1135 ------------------------------VPYQRQFQVHAERLVNVRHL-------ESL 1157
+P + F H E +RHL E
Sbjct: 1615 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFD-HPEADRTLRHLISGFENFEKK 1673
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG L
Sbjct: 1674 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1733
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES- 1274
TD+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1734 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSE 1789
Query: 1275 ------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I +
Sbjct: 1790 LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSAN 1849
Query: 1323 F--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + + P GK VTVEV G+ + + AK
Sbjct: 1850 VPRSPVRELLE--MEPEITKFSPAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1904
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1905 AARRALRSLKANQP 1918
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQ-QLFKTYQNNHEGLLSVKKERIISNAA 1039
+L+A+T + F+LE LE LGDSFLK+A + L + HEG LS + + +SN
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIP 1066
L +LG ++ LP + FDP + +P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDPPVNGLP 1383
>gi|21665773|emb|CAB38857.2| hypothetical helicase K12H4.8-like protein [Homo sapiens]
Length = 1912
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 144 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 198 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 251
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 252 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 306
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 307 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 353
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 411
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 412 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 471
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 472 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 530
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 531 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 588
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 589 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 647
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 648 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 704
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1658 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1717
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1718 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1773
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1774 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1833
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1834 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1887
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1888 RIAKSAAARRALRSLKANQP 1907
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1380
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1273 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1325
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1326 PDAHEGRLSYMRSKKVSN 1343
>gi|296475171|tpg|DAA17286.1| TPA: endoribonuclease Dicer [Bos taurus]
Length = 1922
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/716 (29%), Positives = 318/716 (44%), Gaps = 125/716 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+ +++ + G T+++++ + YC+RLPSD + PK +E+
Sbjct: 599 ADTEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCR-TREL 657
Query: 590 G----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 658 PDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 713
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 174/374 (46%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVN- 1134
+ K++AD VEAL+G +L++ GE +FL +G+KV +F +
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQ 1614
Query: 1135 ------------------------------VPYQRQFQVHAERLVNVRHL-------ESL 1157
+P + F H E +RHL E
Sbjct: 1615 QKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFD-HPEADRTLRHLISGFENFEKK 1673
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG L
Sbjct: 1674 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1733
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES- 1274
TD+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1734 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSE 1789
Query: 1275 ------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I +
Sbjct: 1790 LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSAN 1849
Query: 1323 F--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + + P GK VTVEV G+ + + AK
Sbjct: 1850 VPRSPVRELLE--MEPEITKFSPAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1904
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1905 AARRALRSLKANQP 1918
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQ-QLFKTYQNNHEGLLSVKKERIISNAA 1039
+L+A+T + F+LE LE LGDSFLK+A + L + HEG LS + + +SN
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIP 1066
L +LG ++ LP + FDP + +P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDPPVNGLP 1383
>gi|109478606|ref|XP_001068155.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|109479876|ref|XP_001069041.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|149025439|gb|EDL81806.1| rCG20888 [Rattus norvegicus]
Length = 1918
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/716 (29%), Positives = 324/716 (45%), Gaps = 124/716 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLSPHA 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L ++ S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCDSCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPDELE--EKIQKLEKILKSGAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALDFIN-DCNVSVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T+++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDD 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 482 HGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPT 541
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V + A
Sbjct: 542 EYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDGAEA 599
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 600 DVHAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TREL 658
Query: 590 G----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 659 PDGTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 714
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 173/372 (46%), Gaps = 81/372 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV D + P Q
Sbjct: 1552 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQ 1611
Query: 1145 ---------------------------------------AERLVN-----VRHLESLLNY 1160
AE+ +N + E +NY
Sbjct: 1612 QKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINY 1671
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1672 IFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1731
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES---- 1274
RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1732 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELRR 1787
Query: 1275 ---------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P++ P+I +
Sbjct: 1788 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPR 1847
Query: 1324 HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1848 SPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAA 1901
Query: 1383 KEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1902 RRALRSLKANQP 1913
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG +Q LP + FDP + W+ PG D S S + D +
Sbjct: 1357 YRLGKKQGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 1402
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN-DCYALSSVKHGLHKHIL 1244
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N + Y L K GL ++
Sbjct: 1313 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGK-KQGLPSRMV 1370
>gi|296215835|ref|XP_002754306.1| PREDICTED: endoribonuclease Dicer isoform 3 [Callithrix jacchus]
Length = 1922
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNGSWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVVDDDDIFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|307133775|ref|NP_001182502.1| endoribonuclease Dicer isoform 2 [Homo sapiens]
gi|300517087|gb|ADK25182.1| t-Dicer [Homo sapiens]
Length = 1829
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWESVTSF 1278
G +S SF
Sbjct: 1784 GMDSEKSF 1791
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|403274211|ref|XP_003928879.1| PREDICTED: endoribonuclease Dicer isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274213|ref|XP_003928880.1| PREDICTED: endoribonuclease Dicer isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1922
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNGSWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 AEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVVDDDDIFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|195425457|ref|XP_002061021.1| GK10670 [Drosophila willistoni]
gi|194157106|gb|EDW72007.1| GK10670 [Drosophila willistoni]
Length = 1720
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 255/1068 (23%), Positives = 458/1068 (42%), Gaps = 178/1068 (16%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
R+YQ ++ ++N IV+L TG+GKT +AI+ L+ ++ K A+F+ V
Sbjct: 10 VRSYQSRLVDYLTERNGIVYLPTGAGKTFVAILTLKRFSLDFDKTIEDGGKRAIFMCNTV 69
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
L QQA A + T+ KVG Y GD GVD W + W E+ + +VLV T Q++LD + ++
Sbjct: 70 ELARQQALACRSLTNFKVGFYVGDQGVDEWSRSKWDVEIREKQVLVGTAQVMLDLMLHAH 129
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
L + ++I+DECHH G+H + M F H + LPR+ G+T IK ++
Sbjct: 130 LSLGSVSIVIIDECHHGTGRHPFREFMRLFLHV---RPNVQLPRVVGLTGVLIKGNEINN 186
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTH---LAD 255
+ + + +LET + + T + + N + +ST +F+ + + TH L D
Sbjct: 187 VK---KMLKNLETTYHGNIITVSDMKEMENVMLYSTKPKEFF----LLYGYGTHKFELID 239
Query: 256 ELA-MIELKHTRSLENLDLN----------EAQAELIRKKVSK-INSTLLYCLSELGVWL 303
+ IE H + L+N D+ + Q E +K +K + + +Y L E G+++
Sbjct: 240 TIKYYIEAFH-KKLDNYDIGKQPVRFSNGLQQQREPNKKNFAKSLLNDFIYQLEEYGIYV 298
Query: 304 A--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPS 349
A + AET+ A D ++ K D +
Sbjct: 299 ASIAVVALLVEFEIKKRQAETLVLRSIYRMAISLCDNIRHFLVSKLREDIDDDMSDDNVD 358
Query: 350 GAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSE 409
E + +N + + ++ + ++ + +DI C++FVER T + +L +
Sbjct: 359 TEE------NIYNFSTPRV-QRFLHYLKQTFSNKNPKDICCLVFVERRYTCKSIYGMLLK 411
Query: 410 LLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
+ K +++ G N Q RK QN +++FR G N+++ +S+LEEG
Sbjct: 412 YIASVPELKNVLVPQFMVGRNGINQNFDTVLERKWQNSAIQQFRDGEANLMICSSVLEEG 471
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV-KSGDSTTQSRLENYLAS--- 517
+DVQ+CN VI+ DP +T S++Q++GRAR +++ +L++ +S T R+ +Y +
Sbjct: 472 IDVQACNYVIILDPLKTFNSYVQTKGRARSKDAVFLILASESEKPKTAKRIMDYQNAHRD 531
Query: 518 -GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY 576
N ++ VL A +N H ++ TG++ SS+++L++ YC LPSD +
Sbjct: 532 IANYLQDRVLERAEPKMDEINEHFRDIIPPYINETGSLLLASSALALLHRYCQTLPSDAF 591
Query: 577 FKPTPKF----------HINKEM---GICTLYLPNNCPIQTVIAQGNI---KTLKQAACL 620
P + H K + ++ LP + +++ I + K+ K +A
Sbjct: 592 GFNMPWYKLLNPDERVQHFGKSAETKQVVSINLPLSTKLRSTIYSDLMNCNKSAKISAAF 651
Query: 621 EACKKLHQIGALTDNLLP-----------------------DIVVEKHDAQKRGNEPYNA 657
CK+L+++G L LP D+ K GN +
Sbjct: 652 NVCKELYKLGELNQKFLPTTLTDRLKDVSDIHFKHWKKYGDDVTKTNRKEDKSGN---TS 708
Query: 658 EHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT-------ELESE 710
++P+ P +L + P+ + Y Y I LK HF + ++ A++T +
Sbjct: 709 KYPVNCPTQLYDTRPRVGETCY-AYEILLKPHFERNEYTAHMHDALQTGRGYALLLRKRL 767
Query: 711 IKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLL--------CRRFQITLFRVIMDHNLD 762
L G++ V++ P++V+L +F I LFR I+
Sbjct: 768 PPLAEMPLFSSHGKIHVSVAEQ------PHEVILKTEEQLDHLHQFHIMLFRDIL----- 816
Query: 763 KLNEILDGFELRD--NLEIDYLLLP--------STGQLIDWKTV---------ATVLFPR 803
+I + + D + E YL++P G +IDW V + L P
Sbjct: 817 ---KIWQSYFVLDKRSKENSYLVVPLDIKSSGKGEGNIIDWNLVTQFYRGLPQSRTLSP- 872
Query: 804 DNGSKHNMNCSTMFNARIVHT-----KSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLN 858
D + C F +IV + + K+H TP + + + +
Sbjct: 873 DQRRRQEPPCPDDFEGKIVTQWYASYQDKRMLVTKVHRDK--TP-------FSMMESNQS 923
Query: 859 ANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK 918
N+ + + +++ YK + C L + F++ + + Q K ++
Sbjct: 924 ENNYY---DYTMSKYKNVIGDVVHQNQCLIEVRELTQQLNFYIAHRVKTSGQSK----AR 976
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 966
L PELC P L + F+PSI++RL LL A L+ +
Sbjct: 977 ARIILIPELCFNFQFPGDL--WAKLLFLPSILNRLHYLLHAEALRQRM 1022
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 211/478 (44%), Gaps = 122/478 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ C + F +E LE LGDSFLK +A+ L + N +EG+L+ K ++SN L
Sbjct: 1201 LTAITSSGCSDVFDMERLELLGDSFLKMSATLYLSSIHSNWNEGVLTQIKSTLVSNRNLL 1260
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG-----------------------DNSGSYELND 1077
E +P I + F PK W PG N + +L +
Sbjct: 1261 YCMNETDIPSRINSTLFTPKYTWKPPGLSLPHNILNLWQEQPEVAKFVLPRNLCALQLTE 1320
Query: 1078 DSLFNGRKI----------------------------YVTGRKKVKSKTVADVVEALIGA 1109
+ +F+ K+ + G+ K+ +K VAD +EAL+G
Sbjct: 1321 EEIFSLGKLTPANFEKFLESCQANTNYTSTDYESEMNFCIGKSKLSNKVVADTLEALLGV 1380
Query: 1110 FLSTGGENVGLIFLDRIGI--KVDFVNVPYQRQFQVH-------AER--------LVNVR 1152
+ G G L+ GI +VD + P + + A+R L+N
Sbjct: 1381 IVKNYGVQHGFRILEYFGICKQVD-IGKPLSQLLDLQLGSTRTRADRDPREIDGLLINYH 1439
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++ + +
Sbjct: 1440 YLERNLGYTFKDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFERNIRM 1499
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK--------- 1263
+PG LTD+RSA VNN A V+H H IL + L + IN VD EK
Sbjct: 1500 NPGQLTDLRSALVNNTTLACICVRHRFHLFILAENTLLTESINSFVDFQEKHMHRVTHHV 1559
Query: 1264 ---------------------------------LSLGSTFGWESVTSFPKALGDIIESLA 1290
L+ G+ E+V PKALGD++E+L
Sbjct: 1560 RILLEENDIQCHNPLDEEDELEMADNLSTNDEPLAKGNLNMSENV-DVPKALGDVVEALI 1618
Query: 1291 GAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVAS 1346
A+++D + + ++ + L EP + + +P+R+L E+ + KP+ S
Sbjct: 1619 AAVYLDCK-DLQKTWEVVYRLFEPELIEFSRNVPINPLRQLNEH------RLAKPIFS 1669
>gi|297695799|ref|XP_002825114.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pongo abelii]
gi|297695801|ref|XP_002825115.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pongo abelii]
gi|297695803|ref|XP_002825116.1| PREDICTED: endoribonuclease Dicer isoform 3 [Pongo abelii]
Length = 1922
Score = 220 bits (561), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDDYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|432096208|gb|ELK27069.1| Endoribonuclease Dicer [Myotis davidii]
Length = 1970
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 210/717 (29%), Positives = 320/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV- 70
+E D + R YQ+E LE AL +NTIV L TGSGKT IA++L + +Y +R F
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDRNTIVCLNTGSGKTFIAVLLTKELSYQIR--GDFSR 81
Query: 71 ----AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
VFLV V QQ A++ H+DLKVG+Y + W W +E +KH+VL+MT
Sbjct: 82 HGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYAHLEVLASWTKEKWNQEFTKHQVLIMT 141
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+
Sbjct: 142 CYVALIVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGL 195
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TAS + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 196 TASILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPYEIVVDCGP 249
Query: 247 HALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELG 300
+ L + L M EL+ + N D N E + LI K++ +L LG
Sbjct: 250 FMDRSGLYERLLM-ELEEALNFVN-DCNISAHSKERDSTLISKQILADCRAVLVV---LG 304
Query: 301 VWLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWS 354
W A K A + EQ + F +T ++K + +
Sbjct: 305 PWCADKVAGMMVRELQKHIKHEQEELHRKFLPFTDTFLRKIHALCEEHF----------- 353
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE---------------------------- 386
S LD +T K++ L+E L +Y+ E
Sbjct: 354 ----SPAALDLRFVTPKVIRLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDD 409
Query: 387 --------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYI 422
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 410 EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI 469
Query: 423 AGNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 470 TGHGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFD 528
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPC 533
S++QS+GRAR S+Y+++ + + + L+ Y A +R +
Sbjct: 529 LPTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE 588
Query: 534 SPLNNHMYGEDFY-----HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ + + +D + + G T+++++ I YC+RLPSD + PK +E
Sbjct: 589 TDIEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 647
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 648 LPDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 704
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 105/213 (49%), Gaps = 49/213 (23%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1542 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTEHEKAMCPARENCSSQ 1601
Query: 1131 ------------------DFVNVPYQRQFQVHAERLVNVRHL-------ESLLNYSFRDP 1165
+ +P + F H + + HL E +NY F++
Sbjct: 1602 QRSLSGSRAAAAGKDVEYGCLKIPPRCMFD-HPDADKTLTHLISGFENFEEKINYRFKNK 1660
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
+ L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA V
Sbjct: 1661 AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV 1720
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
NN +A +VK+ HK+ S EL++ I++ V
Sbjct: 1721 NNTIFASLAVKYDYHKYFKAVSPELFQVIDVFV 1753
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D G+ D L
Sbjct: 1347 YRLGKKRGLPSRMVVSIFDPPVNWLPPGYAVGQDRGGADTWEKDEL 1392
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQK 1335
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I + PVREL E +
Sbjct: 1853 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1912
Query: 1336 NHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
FS P GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1913 AKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1965
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1283 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1335
Query: 1220 MRSASVNN-DCYALSSVKHGLHKHIL 1244
MRS V+N + Y L K GL ++
Sbjct: 1336 MRSKKVSNCNLYRLGK-KRGLPSRMV 1360
>gi|281427125|ref|NP_001163918.1| dicer 1, ribonuclease type III [Xenopus laevis]
gi|261826170|gb|ACX94846.1| truncated double-stranded RNA-specific endoribonuclease type III
[Xenopus laevis]
Length = 1795
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 210/719 (29%), Positives = 318/719 (44%), Gaps = 128/719 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL N IV L +GSGKT IA++L + +Y +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNIIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ HTDLKVG+Y W W +E H+VLVMT
Sbjct: 84 KRTVFLVNSEKQVSQQVSAVRTHTDLKVGEYSDLQKTQCWAKGKWYQEFQTHQVLVMTCH 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L+ L+ L+ I +L+ DECH A H Y IM ++ E+ + PRI G+TA
Sbjct: 144 IFLNVLKTGNVSLSNINLLVFDECHLAIQDHPYRDIM-----KICESCQT-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH- 247
S + K D +KI +LE ++ S T VL + ++ D P+
Sbjct: 198 SILNGKCDP--HDLEEKIQNLEEILRSNAETATDLVVLDRY----ASQPCEIVLDCGPYV 251
Query: 248 ---ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSELGVWL 303
LY L +EL + L + +++ E +SK I S L LG W
Sbjct: 252 DRSGLYQRLLNELD----EALNFLTDCNISTHSKERDSTIISKQILSDCWAVLLVLGPWC 307
Query: 304 ALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
A K A + + EQ + F +TI++K + +
Sbjct: 308 ADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTILRKIHALCEEHF-------------- 353
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 -SPASLDMKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDE 412
Query: 387 -------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIA 423
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 413 DEEIEAKEKAETSFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 472
Query: 424 GNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 473 GHGIG-KNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL 531
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSH 528
S++QS+GRAR S+Y+++ SG D T +E L NK K +
Sbjct: 532 PSEYRSYVQSKGRARAPISNYIMLADSGKIKAFEEDLKTYKSIEKILR--NKCSKS-MDC 588
Query: 529 ASLPCSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN 586
+ P+ ++ ++ + T+++++ I YC+RLPSD + PK
Sbjct: 589 GNTESEPIVDDDEIFPPYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-T 647
Query: 587 KEMGI----CTLYLPNNCPIQTVIAQGNI---KTLKQAACLEACKKLHQIGALTDNLLP 638
+E+ TLYLP N P++ I + + ++A L CKKLH+IG L D+L+P
Sbjct: 648 RELPDGPYHSTLYLPINSPLRAPIVGPPMNCARLAERAVALICCKKLHEIGELDDHLMP 706
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 48/222 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRI--------------------------- 1126
+ K++AD VEAL+G +L++ GE +FL +
Sbjct: 1528 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLDLKVLPEVRKPVTNTSTRGNYSLDGRT 1587
Query: 1127 -------GIKVDFVNVPYQRQFQVHAERLVNVRHL-------ESLLNYSFRDPSLLVEAL 1172
GI+ ++ +P + F+ H E + HL E +NY F++ + L++A
Sbjct: 1588 NSELSCKGIEYGYLKIPPRCMFE-HPEAEKTLDHLISGFENFEKKINYQFKNKAYLLQAF 1646
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1647 THASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFAS 1706
Query: 1233 SSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST--FGW 1272
+VK+ HK+ S EL+ +D F + L T GW
Sbjct: 1707 LAVKYDYHKYFKAISPELFH----VIDDFVQFQLEKTKCKGW 1744
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE GDSFLK+A + LF TY ++HEG LS + + +SN L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSYMRSKKVSNCNL 1333
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG------DNSGSYELNDDSLFNGRKIYVTGR 1091
+LG ++ P + FDP + W+ PG NS +E N+ S G + G+
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETS---GESVMANGK 1388
>gi|195995859|ref|XP_002107798.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
gi|190588574|gb|EDV28596.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
Length = 1418
Score = 220 bits (560), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 266/1040 (25%), Positives = 449/1040 (43%), Gaps = 168/1040 (16%)
Query: 391 IIFVERVITAIVLQSLL---SELLPRHCTWKTKYIAGNNS------GIQCQSRKKQNEIV 441
IIFV+R +TA VL LL S P + G +S G SR +Q E++
Sbjct: 415 IIFVDRRVTAFVLHELLVRISHTDPNLAHLNVGCVIGRSSIKSQLLGQAQMSRYEQEEVM 474
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
FRR N++VAT++LEEG+DV CN+VI FD S++QSRGRAR +S Y+LM+
Sbjct: 475 NRFRRHKYNLLVATNVLEEGVDVSECNVVIRFDRVNHFSSYLQSRGRARADDSSYVLMIN 534
Query: 502 S-------GDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF----YHVES 550
+ + +E +L S ++ ++S S +N + VE+
Sbjct: 535 RENLDAFMEEYNSWHSVEKFLRSSPELLNTIVSGISKSLFSNDNSTTDASTISSKFVVET 594
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGN 610
TG L S++S++ Y + + P ++ N + + L + P + +G
Sbjct: 595 TGAEVNLFSAISVLLRYSQSMINGK--SPEFEYETNDDRTRAKIKLIFSNPPEKTTIEGP 652
Query: 611 I----KTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPE 666
+ K K+A+ LEACK LH++G +TDNL P++ K + + PI FP
Sbjct: 653 MMQSKKIAKKASALEACKFLHEVGEITDNLEPNVGKYHQSIDKSQYKQF----PIKFPDN 708
Query: 667 LVNQSPQDTKITYHCYLIELKQHFNYDIS----ARNIVLAMRTELESEIKKVNFDLEVER 722
L H IELK I + + L +T+L EI+ L+
Sbjct: 709 LSMPIEDGDNFYLHMIKIELKNSTIESIDTVSCSSDFGLICKTKLH-EIEPTY--LQTSC 765
Query: 723 GRLTVNLKHLG-RIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDY 781
G + +L+ L + +++ L +F LF N+ + I D N Y
Sbjct: 766 GDILFSLQSLAVPMHYSCDELSLISKFVEYLFT-----NITPCSTITDLIYDPTNSYAKY 820
Query: 782 LLLP-----STGQL--IDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKI 834
+++P S+ + I+++ +AT+L PR K+ S + + CK
Sbjct: 821 MIVPLNYAKSSRSMYSINFELMATLLKPR----KYWPFASNLGDG------------CKN 864
Query: 835 HNSLVCTPHNGQ-------IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCF 887
N L+ + G +Y + + L+ S F + TYK +Y +Y ++
Sbjct: 865 VNDLLIVKNYGHWVTNQVDVYALRNICYDLSPLSRFPTDKR--LTYKAYYHRKYHTRIEN 922
Query: 888 DREPLLNGRRIFHV------QNYLSKCRQQKQKEPSKISF-ELPPELCRIIMAPISLSTF 940
+PL + + +N +S C + + S F L PELC ++ P S S +
Sbjct: 923 SNQPLFAVKTLHRFPVALVHENCISPCNNTTESKKSNSGFVHLVPELC--LVHPFSASMW 980
Query: 941 YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC---MQNVTIPTIKVL-------------EA 984
F+P +++++ LA + + + C ++ VT P K L ++
Sbjct: 981 MLSQFLPLTLYKIEKNCLAYEMIDYI--QCASILKKVTEPRRKKLLLRETTNLVDRITQS 1038
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
+T +E + ++ +G F+K + L++T +++ L++K+ + S L L
Sbjct: 1039 LTLPIAEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLA 1098
Query: 1045 CEQKLPGFIRTESFDP-KMWIIPG--------DNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
+ +P +I ++ F+ K WI PG D+S S DS R I +
Sbjct: 1099 AKTNIPSYIISKPFNQLKCWIPPGFTFSIRCKDDSSS-----DSALAERTIIESITDNFL 1153
Query: 1096 S-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVPYQRQFQVHAERLVN--- 1150
S K++A+ + A++GA L E GL FL +G ++ F ++ F V E++ +
Sbjct: 1154 SVKSIAECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSI--SNGFDVWNEKITHMIE 1211
Query: 1151 ----------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
+ E L Y F + L+ A TH S + Y++LEF+GD++L+YL
Sbjct: 1212 ESNSQSWLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGD-SFNYEKLEFVGDSILNYL 1270
Query: 1201 ITVYLYNKYPGLSPGYLTDM---RSA-----SVNNDCYALSSVKHGLHKHILHASHELYK 1252
+ YL+ TD RS +++N+ Y L S + H H+ + S + +
Sbjct: 1271 VIKYLF---------LATDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQSPFVKE 1320
Query: 1253 RI----NITVDSFEKLSL---GSTFGW---------ESVTSFPKALGDIIESLAGAIFVD 1296
I T D E S+ G+ W + S PK L D+ ESLA AI+ D
Sbjct: 1321 MILGFEKKTADLLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLAAAIYFD 1380
Query: 1297 SGCNREVVFQSIRPLLEPMI 1316
SG N V+ LL+P +
Sbjct: 1381 SGQNLSTVWNIYSNLLKPFL 1400
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 110/198 (55%), Gaps = 10/198 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKVV 79
R YQL+ A ++NTIV+LETGSGKTLIA++++R L K A+FLV V
Sbjct: 56 RKYQLDLAVIAQERNTIVYLETGSGKTLIAVLVIRQLYRELSKSLQAGGKRAIFLVNTVP 115
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA+ I T VGK +G D + WK+ K+ V+V TPQ LL L L+
Sbjct: 116 LVHQQAKFIADQTSFCVGKLFGKCNSD-KRRSNWKDFFDKNNVIVGTPQTLLRLLELNIV 174
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ MI +++ DECHHA H Y+ IM + L E G P+I G+TA K + S+
Sbjct: 175 NMQMINLIVFDECHHATKHHPYSRIM-DAVKALEEQGR---PKILGLTACIFKGECKPSK 230
Query: 200 QDYWQKIHDLETLMNSKV 217
Q++ +LE ++S +
Sbjct: 231 VP--QRLAELEEKLSSTI 246
>gi|432936630|ref|XP_004082201.1| PREDICTED: endoribonuclease Dicer-like [Oryzias latipes]
Length = 1890
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 203/712 (28%), Positives = 317/712 (44%), Gaps = 116/712 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL+ NTIV L TGSGKT IA++L + ++ +R + +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLTKELSHQIRGSYQENA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFL QQA A++ H+DL VG+Y W W E++ ++VLVMT
Sbjct: 84 RRTVFLANATSSAVQQAAAVRTHSDLHVGEYSDPQEATTWSRQRWSREIADNQVLVMTCH 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L L L+ I +++ D+CH A +H Y +M F + RI G+TA
Sbjct: 144 VFLHVLTNHILPLSKINLVVFDDCHLAITEHPYCEVMKLFEEHTCGS------RILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K SE + QKI +LE ++ S T VL + + + D P+
Sbjct: 198 SILNGKCDPSELE--QKIQNLERILKSSAETATDLVVLDRY----ACQPREVVLDCGPYM 251
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSELGVWLALKA 307
+ L+ L + L + +++ ++ + +SK I S L L LG W A KA
Sbjct: 252 DKSGLSSRLQAELEEALLFLNDCNISASREDRDPTFISKQILSDCLAVLQVLGPWCADKA 311
Query: 308 AETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
A + + EQ + F +TI++K + + S
Sbjct: 312 AGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHF---------------SPA 356
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVE----------------------------------- 386
+LD +T K++ L+E L EY+ E
Sbjct: 357 SLDLKFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEA 416
Query: 387 -------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGI 429
+I C IIFVER TA+VL L+ E P + +I G++ G
Sbjct: 417 KERPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG- 475
Query: 430 QCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
+ Q+R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S
Sbjct: 476 KNQARNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRS 535
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTT-QSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
++QS+GRAR S+Y+++ S + Q L Y A +R + S+ +
Sbjct: 536 YVQSKGRARAPVSNYIMLADSERTQAFQEDLTTYKAIEKILRNKC--SKSVEVGEFDGEQ 593
Query: 541 YGED-------FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--- 590
+D E G T+++++ I YC+RLPSD + PK E G
Sbjct: 594 VVDDDNILPPYVLRSEDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPKCK-TVETGNGR 652
Query: 591 -ICTLYLPNNCPIQTVIAQGNI---KTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I + + ++A L C+KLH+IG L D+L+P
Sbjct: 653 FQSTLYLPINSPLRVPIKGPTMHCARLAEKAVALLCCEKLHKIGELDDHLMP 704
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 174/351 (49%), Gaps = 61/351 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1546 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPSEPGTSRASKAPSSRTSAADL 1605
Query: 1131 --DFVNVPYQRQFQVHAERLVNVRHL-------ESLLNYSFRDPSLLVEALTHGSYMLPE 1181
++ +P R H + ++HL E +NYSF++ + L++A TH SY
Sbjct: 1606 SYGWLKIP-PRCMLAHPDAERTLQHLISGFENFEKKINYSFQNKAYLLQAFTHASYHYNT 1664
Query: 1182 IPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHK 1241
I CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK
Sbjct: 1665 ITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHK 1724
Query: 1242 HILHASHELYKRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDII 1286
+ S EL+ +D F + L G +S PKA+GDI
Sbjct: 1725 YFKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIF 1780
Query: 1287 ESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFSMKKP 1343
ESLAGAI++DSG + E V+Q P++ P+I + PVREL E + FS P
Sbjct: 1781 ESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS---P 1837
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1838 AERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1885
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1268 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1327
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1328 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1361
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1284 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1324
>gi|395827764|ref|XP_003787065.1| PREDICTED: endoribonuclease Dicer isoform 1 [Otolemur garnettii]
gi|395827766|ref|XP_003787066.1| PREDICTED: endoribonuclease Dicer isoform 2 [Otolemur garnettii]
Length = 1921
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 214/715 (29%), Positives = 320/715 (44%), Gaps = 124/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALYVLKNGYLPLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN-EAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
+ L ++L M EL+ + N D N + LI K +I S L LG W A K
Sbjct: 262 DRSGLYEKLLM-ELEEALNFIN-DCNISVHSTLISK---QILSDCRAVLVVLGPWCADKV 316
Query: 308 AETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
A + + EQ + F +T ++K + + S
Sbjct: 317 AGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF---------------SPA 361
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVE----------------------------------- 386
+LD +T K++ L+E L +Y+ E
Sbjct: 362 SLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEE 421
Query: 387 -------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGI 429
+I C IIFVER TA+VL L+ E P + +I G+ G
Sbjct: 422 KEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG- 480
Query: 430 QCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
+ Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S
Sbjct: 481 KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRS 540
Query: 482 FIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
++QS+GRAR S+Y+++ + D T +E L NK K V + +
Sbjct: 541 YVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVETGETDIDP 598
Query: 535 PLNNHMYGEDF----YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
+++ + F + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 599 VVDDDDDDDIFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELP 657
Query: 591 ----ICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 658 DGTFYSTLYLPINSPLRASIIGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 712
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1667 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1726
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1727 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1782
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1783 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1842
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1843 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1896
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1897 RIAKSAAARRALRSLKANQP 1916
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1382
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1291 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1343
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1344 MRSKKVSN 1351
>gi|114654619|ref|XP_001154369.1| PREDICTED: endoribonuclease Dicer isoform 6 [Pan troglodytes]
gi|410048689|ref|XP_003952618.1| PREDICTED: endoribonuclease Dicer [Pan troglodytes]
gi|410219112|gb|JAA06775.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256210|gb|JAA16072.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256212|gb|JAA16073.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306234|gb|JAA31717.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306236|gb|JAA31718.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351815|gb|JAA42511.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351817|gb|JAA42512.1| dicer 1, ribonuclease type III [Pan troglodytes]
Length = 1922
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 319/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSH 528
S++QS+GRAR S+Y+++ + D T +E L NK K V
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 529 ASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ ++ ++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 IDIDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1668 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1727
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1728 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1783
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1784 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1843
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1844 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1897
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1898 RIAKSAAARRALRSLKANQP 1917
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1283 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1335
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1336 PDAHEGRLSYMRSKKVSN 1353
>gi|403171941|ref|XP_003331118.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169641|gb|EFP86699.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 219 bits (558), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 276/1049 (26%), Positives = 443/1049 (42%), Gaps = 192/1049 (18%)
Query: 368 LTEKIVCLIESLLEYRGVED---IRCIIFVERVITAIVLQSLLSELLPRHCTWK------ 418
L+ K++ L + L+ Y+ +D CI+FVER A LL LL R+ K
Sbjct: 340 LSSKVIALYKILVNYKEKDDHNNFLCIVFVERRQHA----QLLPILLERNVQLKDFLRPA 395
Query: 419 --TKYIAGNNS---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
T + +GN + GI+ S K QN V +FR G N+ +ATS+ EEGLD +SC +VI F
Sbjct: 396 ALTGHGSGNENDLIGIKMDS-KTQNRTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRF 454
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC 533
D T +IQSRGRAR + SDY++M+ +G + YLA K + + P
Sbjct: 455 DLITTWKGYIQSRGRARARESDYIVMLPTGTAN------KYLAFSGKEEQLKAALYDRPQ 508
Query: 534 SPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
L E + + +I T S++ SL+ C +P D + + E
Sbjct: 509 DELIEDGEEESTPQLICQLADGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPEYEMME 568
Query: 589 MG---ICTLYLPNNCPIQ------TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP- 638
+G C + LP + T + G K++A EACK L ++G L ++ LP
Sbjct: 569 LGERFKCRVTLPPMAALPPSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLPQ 628
Query: 639 --DIVVEKHDAQKR-------------------GNEPYNAE---HPIYFPPEL-VNQSPQ 673
D V + DA R G+ ++E H + FP + S
Sbjct: 629 REDKVAQVRDADGREIETTQLADKVEAIISNVYGDFRTSSEVWLHKLSFPDDTPAGFSTM 688
Query: 674 DTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLG 733
H + + Q F++D +R + + ++ KKV E E+ NL+ L
Sbjct: 689 GLLCARHLTIPDDLQLFDHDPVSRPLSVKIKHS-----KKV----EWEKDAAPFNLQRLE 739
Query: 734 RIQLIPNQVLLCRR-FQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLID 792
R L+ QV + R+ ++ L+ ++ L D +EID
Sbjct: 740 RFTLLVMQVAVNRKPYEGKLYFLVAPL-------------LNDAIEID------------ 774
Query: 793 WKTVATVLFPRDNGSKHNMNCSTMFNAR-----IVHT--KSGPLCTCKIHNSLVCTPHNG 845
W V T + P + + T+ +R I T +G LC + + P +
Sbjct: 775 WNLVDTPMIPLSEAADSSRYQCTIVPSRRPRFRIFDTCESAGDLCAASPPSRVPACP-SM 833
Query: 846 QIYCITGV----LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNG----RR 897
Q +C LGH YK Y+ + E L G +
Sbjct: 834 QHFCKKIAKFHNLGHF---------------YKTCYD--------LEDEHLKGGFVYLQT 870
Query: 898 IFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
F V N L + + P + LP +LC+ P ++ + F+++PS+ L +
Sbjct: 871 TFQVYNNLLQS-ESTLAHPYRTL--LPLKLCQGTHIPRTI--WKVFSYLPSLTRLLHDSI 925
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
A L M LD M +P + ++A+T + ++LET+GD+FLK A S ++
Sbjct: 926 QATAL-FMRLDFPM--TLLP--RGIQALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYL 980
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELND 1077
++ EG +S + + + N L + + LP I + F + G
Sbjct: 981 SHLRKGEGDMSHVRSKSVDNDYLRRKAIQANLPSSILGQRFRTDRFRDAQTEDGK----- 1035
Query: 1078 DSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV---N 1134
L NG + V + ++DVVEAL+GA TGG +GL +IG +D
Sbjct: 1036 -ELPNG-----NFSRNVPRRVLSDVVEALLGAGFLTGGIELGL----KIGTALDLCFGGT 1085
Query: 1135 VPY-QRQFQVHAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYMLP 1180
P+ +R + E L+ + LE + Y F++ LLV+ALTH S+M
Sbjct: 1086 TPWNERTLNIAFEGTAHDKLASPILLKCQALEEKIGYVFKEKLLLVQALTHRSANSFMT- 1144
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GL 1239
CY+R E+LGDAV+D I + Y ++ + LT R+ V+N ++K GL
Sbjct: 1145 ---NCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLARAKLVSNGSLGFLAIKKLGL 1201
Query: 1240 HKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSF-----PKALGDIIESLAGAIF 1294
HK I+H S + + + E + F F PK L D++E++ GA+F
Sbjct: 1202 HKMIMHKSESFEQACVEAIKAIEPFTSIEEFFSNLENLFVVFDPPKILNDVLEAIVGAVF 1261
Query: 1295 VDSGCNREVVFQSIRPLLEPMITPETMRF 1323
+DS + V+++I + E +TP R
Sbjct: 1262 IDSRFDLPTVYRTIDKIFED-VTPGLSRI 1289
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 8/206 (3%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFL 74
D + R YQ E LE A K+N I+ +TG+GKT++A+ L+ A + + + FL
Sbjct: 16 DLIKIPRLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAVKTKANNKNHQIQAFL 75
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
VP L QQAE I+ H L++ Y GD+ + W+ W E+++ +VLV T QI D +
Sbjct: 76 VPTRPLAHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNEVDVLVSTAQIFYDLI 135
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS- 193
Y+KL + +LI DE HH R H Y IM YHRL + LP+I G+TASPI +
Sbjct: 136 SKGYWKLEDVSLLIFDEAHHCRKNHVYNQIMRSHYHRLAKDSTVRLPKILGLTASPIWNF 195
Query: 194 -KVSSSEQDYWQKIHDLETLMNSKVY 218
+ +E D I +L++ + +++Y
Sbjct: 196 KDLEKAESD----IKNLQSALAAQIY 217
>gi|346716367|ref|NP_001231198.1| endoribonuclease Dicer [Cricetulus griseus]
gi|257051055|sp|A0MQH0.3|DICER_CRIGR RecName: Full=Endoribonuclease Dicer
gi|116831677|gb|ABK28790.1| DICER [Cricetulus griseus]
Length = 1917
Score = 219 bits (558), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 211/715 (29%), Positives = 322/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRA 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + ++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----ASQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEAINFIN-DCNVSVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T+++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDD 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 482 HGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPT 541
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V + A
Sbjct: 542 EYRSYVQSKGRARAPISNYVMLADTDKIQSFEEDLKTYKAIEKILR--NKCSKSVDGAEA 599
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-- 587
+ ++ ++ + G T+++++ + YC+RLPSD + PK +
Sbjct: 600 DVDAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTQELP 659
Query: 588 -EMGICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 660 DGTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 714
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 173/373 (46%), Gaps = 82/373 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV + P Q F
Sbjct: 1550 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQ 1609
Query: 1145 ----------------------------------------AERLVN-----VRHLESLLN 1159
AE+ +N + E +N
Sbjct: 1610 QKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKIN 1669
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1670 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1729
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1730 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELR 1785
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P++ P+I +
Sbjct: 1786 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVP 1845
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1846 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1899
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1900 ARRALRSLKANQP 1912
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1390
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1293 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1345
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1346 MRSKKVSN 1353
>gi|189441606|gb|AAI67373.1| dicer1 protein [Xenopus (Silurana) tropicalis]
Length = 811
Score = 219 bits (558), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 211/722 (29%), Positives = 317/722 (43%), Gaps = 135/722 (18%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L +GSGKT IA++L + +Y +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNT 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ HTDLKVG+Y W W E H+VLVMT
Sbjct: 84 KRTVFLVNSEKQVSQQVSAVRTHTDLKVGEYSDQEKTQCWAKERWYLEFETHQVLVMTCH 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L+ L+ L+ I +L+ DECH A H Y IM ++ E+ PRI G+TA
Sbjct: 144 IFLNVLKSGNVSLSNINLLVFDECHLAIQDHPYREIM-----KICESCQP-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH- 247
S + K +D +KI LE ++ S T VL + ++ D P+
Sbjct: 198 SILNGKCDP--RDLEEKIQKLEEILRSNAETATDLVVLDRY----ASQPCEIVLDCGPYI 251
Query: 248 ---ALYTHLADELAMIELKHTRSLENL-DLN------EAQAELIRKKVSKINSTLLYCLS 297
LY L +EL +L L D N E + LI K++ T+L
Sbjct: 252 DKSGLYQRLLNEL-------DEALNFLIDCNISTHSKERDSTLISKQILSDCQTVLLV-- 302
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGA 351
LG W A K A + + EQ + F +TI++K + +
Sbjct: 303 -LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTILRKIHALCEEHF-------- 353
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 -------SPASLDMKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSE 406
Query: 387 ------------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWK 418
+I C IIFVER TA+VL L+ E P
Sbjct: 407 DDDDEDEEIEEKEKTETSFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYIS 466
Query: 419 TKYIAGNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+ +I G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV
Sbjct: 467 SNFITGHGIG-KNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLV 525
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHA 529
+ FD S++QS+GRAR S+Y+++ S + L+ Y A +R +
Sbjct: 526 VRFDLPSEYRSYVQSKGRARAPISNYIMLADSDKIKAFEEDLKTYKAIEKILRNKC--SK 583
Query: 530 SLPCS-----PL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
S+ C P+ ++ ++ + T+++++ I YC+RLPSD + PK
Sbjct: 584 SIDCGNTESEPIVDDDEIFPPYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK 643
Query: 583 FHINK---EMGICTLYLPNNCPIQTVIAQGNI---KTLKQAACLEACKKLHQIGALTDNL 636
+ + TLYLP N P++ I + + +A L CKKLH+IG L D+L
Sbjct: 644 CKTREFPDGLYRSTLYLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHL 703
Query: 637 LP 638
+P
Sbjct: 704 MP 705
>gi|355778829|gb|EHH63865.1| hypothetical protein EGM_16920 [Macaca fascicularis]
Length = 1910
Score = 219 bits (558), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 212/717 (29%), Positives = 320/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E + PRI G+TA
Sbjct: 144 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPA-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 198 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 251
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 252 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 306
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 307 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 353
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 411
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 412 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 471
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 472 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 530
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 531 TEYRSYVQSKGRARAPISNYIMLADTDKMKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 588
Query: 530 SLPCSPLNNHMYGEDFY-HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ +++ + + G T+++++ I YC+RLPSD + PK +E
Sbjct: 589 TDIDPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 647
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 648 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 704
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1656 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1715
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1716 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1771
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1772 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1831
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1832 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1885
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1886 RIAKSAAARRALRSLKANQP 1905
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1285 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1344
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1345 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1378
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1271 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1323
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1324 PDAHEGRLSYMRSKKVSN 1341
>gi|383872414|ref|NP_001244801.1| endoribonuclease Dicer [Macaca mulatta]
gi|380811118|gb|AFE77434.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811120|gb|AFE77435.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811122|gb|AFE77436.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811124|gb|AFE77437.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|383417045|gb|AFH31736.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
Length = 1920
Score = 219 bits (558), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 212/717 (29%), Positives = 320/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E + PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPA-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKMKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFY-HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ +++ + + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1666 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1725
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1726 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1781
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1782 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1841
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1842 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1895
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1896 RIAKSAAARRALRSLKANQP 1915
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1388
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1281 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1333
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1334 PDAHEGRLSYMRSKKVSN 1351
>gi|402877099|ref|XP_003902280.1| PREDICTED: endoribonuclease Dicer isoform 1 [Papio anubis]
gi|402877101|ref|XP_003902281.1| PREDICTED: endoribonuclease Dicer isoform 2 [Papio anubis]
gi|402877103|ref|XP_003902282.1| PREDICTED: endoribonuclease Dicer isoform 3 [Papio anubis]
Length = 1920
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 212/717 (29%), Positives = 320/717 (44%), Gaps = 126/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCY 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E + PRI G+TA
Sbjct: 154 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPA-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 208 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 261
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K +I S L LG W
Sbjct: 262 DRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISK---QILSDCRAVLVVLGPW 316
Query: 303 LALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T ++K + +
Sbjct: 317 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF------------- 363
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 364 --SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED 421
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 422 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 481
Query: 425 NNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 HGIG-KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 540
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V +
Sbjct: 541 TEYRSYVQSKGRARAPISNYIMLADTDKMKSFEEDLKTYKAIEKILR--NKCSKSVDTGE 598
Query: 530 SLPCSPLNNHMYGEDFY-HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
+ +++ + + G T+++++ I YC+RLPSD + PK +E
Sbjct: 599 TDIDPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 657
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 658 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1666 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1725
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1726 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1781
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1782 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1841
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1842 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1895
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1896 RIAKSAAARRALRSLKANQP 1915
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1388
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1281 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1333
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1334 PDAHEGRLSYMRSKKVSN 1351
>gi|371486410|gb|AEX31250.1| Dicer 2 [Aedes albopictus]
Length = 1659
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 262/1064 (24%), Positives = 450/1064 (42%), Gaps = 167/1064 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ +++NTI++L TG+GKT IA+M ++ L KP F+V V
Sbjct: 14 RDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNTVA 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQAE + + Y D VD W W +E +K +V+V T QILLD L+ Y
Sbjct: 74 LAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHGYL 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ I +LI DECHH G+H IM +F L S+ PR+ G++ + ++ + +
Sbjct: 134 SIKHINLLIFDECHHGVGEHPMHGIMEQF----LRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST-AKFKFYKYDEIPHALYTHLADELA 258
Q ++ LE NS + T S + FST K YD + L+
Sbjct: 190 Q-VSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSL----------RLS 238
Query: 259 MIELKHTRSLENLD-----------LNEAQAELIR------KKVSKINSTLLYCLSELGV 301
+ + RS+E LN+ +A L++ K++ K+ + L+Y L + G+
Sbjct: 239 PVMVDIVRSIEAFSQTINDFHLPKYLNQNKA-LMKDRPKPLKEIKKLFTELVYQLGDTGL 297
Query: 302 W------LALKAAETISCYESDF----FAWEQLDGFGETI---IKKF--GSDASQALVTY 346
+ L L + +SD A F E++ I+K G D + L +
Sbjct: 298 FGCSIALLGLIVQFELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTRF 357
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
S L +++ +E + E + + ++FV+R +A VL +
Sbjct: 358 ------------------SSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHV 399
Query: 407 LSELLPRHCTWK---TKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + ++ G+N + Q S KK ++E F++ NVIV T++L
Sbjct: 400 LKIYFSQTEDADLILPDFMVGSNGSMPESIEQILSAKKDRRVIERFKKNETNVIVTTNVL 459
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL--- 515
EEG+D+Q CN VI +D +T S+ QS+GRARM++S Y++M+ + + Q LE Y
Sbjct: 460 EEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNEER--QKFLEKYRLYK 517
Query: 516 ASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSR 570
+ ++++ ++ PL+ ++ E + + + G S+V L+ YC
Sbjct: 518 SIEQELQRCLIGKTINRPDPLDADVHKELYNEIIPPFFTAKGAKLDALSAVQLLNRYCMG 577
Query: 571 LPSDGYFKPT---PKFHINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACK 624
+P D + + + + + LP ++ I NIK K++A AC+
Sbjct: 578 MPRDAFTNTNVTWERVDLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACR 637
Query: 625 KLHQIGALTDNLLP-----------DIV------VEKHDAQKRGNEPYNAEHPIYFPPEL 667
KL++ L+++L+P D+ ++ + G + H I +P +
Sbjct: 638 KLYENKELSEHLIPIDCRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQT 697
Query: 668 VNQSPQDTKITYHCYLIELKQHFNYDISARNIVL------------AMRTELESEIKKVN 715
P+ K Y Y++ + F D S N+ + M T+ + K+
Sbjct: 698 TGCFPEPGKPCY-IYVLRIGAGFEQDPSNENVNIFHSLYNSENNFGIMTTKPLPVLAKMK 756
Query: 716 FDLEVERGRLTVNLKHLGRIQLIPN-----QVLLCRRFQITLFRVIMDHNLDKLNEILDG 770
F V G + V+L + +PN ++ L R+F +T+FR ++ D L + D
Sbjct: 757 F--FVTLGLINVHLVETPIV--LPNAGSEVELALLRQFHVTVFRDVLRLWKDFL--VYD- 809
Query: 771 FELRDNLEIDYLLLP-STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPL 829
DN +L++P +DW+ + + + S+ STM +R+
Sbjct: 810 ---YDNGINSFLVVPLKKSTHLDWELIRQFQYLSEPPSE----MSTMARSRMDFEADN-- 860
Query: 830 CTCKIHNSLVCTP----HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQL 885
+ V P + Q Y +T V HL S F N +Y ++ E Y + +
Sbjct: 861 -----YRHKVILPWYKNNKEQPYVVTMVHEHLTPGSPFP--NAEYGSYANYFSEAYHLAV 913
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFY 941
+ L+ + I N L+ + K + L PELC P +
Sbjct: 914 VKPDQFLIEVKGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPELCHNYQFPADY--WL 971
Query: 942 SFTFVPSIMHRLQSLLLA----VNLKNMLLDHCMQNVTIPTIKV 981
T +PS +HR+ LLLA V+L C++N TI + V
Sbjct: 972 KATLLPSALHRIHYLLLAEKIRVDLATGANVGCLENHTIEDVDV 1015
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 212/456 (46%), Gaps = 92/456 (20%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV + +L+AITTK + F LE E LGD+FLK+A S L K ++ HEG L+ K
Sbjct: 1168 NVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1227
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPK------MWIIPGDNSGSYE------------ 1074
+I+SN L + LPG ++ FDPK + +P + + +
Sbjct: 1228 QIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRL 1287
Query: 1075 -LNDDSLFNG-----------RKIYVTG-------------RKKVKSKTVADVVEALIGA 1109
+ D+ + G ++ + G ++ + KT AD +EAL+G
Sbjct: 1288 TMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGV 1347
Query: 1110 FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-------------VNVRHLES 1156
+ T G L G+ +V ++ +RL N +ES
Sbjct: 1348 CVQTVGMQRSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIES 1407
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + P +SPG
Sbjct: 1408 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1467
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRINITV 1258
LTD+RSA VNN A V+HGLH +IL S HE+ ++N+ V
Sbjct: 1468 LTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLV 1527
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL--EPMI 1316
+ ++ PKALGD+ ESL A+F+DSG + V ++ I ++ E M
Sbjct: 1528 EESDR-------KMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMGNEIMT 1580
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKA 1352
E VR+L E+ KP S I +A
Sbjct: 1581 FTENTPIQIVRQLYEF---------KPPCSPIFSRA 1607
>gi|195335297|ref|XP_002034311.1| GM19969 [Drosophila sechellia]
gi|194126281|gb|EDW48324.1| GM19969 [Drosophila sechellia]
Length = 1731
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 253/1062 (23%), Positives = 449/1062 (42%), Gaps = 148/1062 (13%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
E + + +S D R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP
Sbjct: 3 EPEDSVTISKDVEIQPRSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKP 62
Query: 67 ---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
A+F+ V L QQA +++ +T+ KVG Y G+ GVD W W EE+ ++VL
Sbjct: 63 IAKGGKRALFMCNTVELARQQAVSVRRNTNFKVGFYVGEQGVDEWTRGKWSEEIENNQVL 122
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPR 182
V T Q+ LD + LN I V+I+DECHH H + M RL D +NLPR
Sbjct: 123 VGTAQVFLDMVTQKNMALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPR 177
Query: 183 IFGMTASPIK----SKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK 238
+ G+T IK +KV++ K+ +LE + T + + N + ++T +
Sbjct: 178 VVGLTGVLIKGNEITKVAT-------KLKELEITYRGNIITVSGSKEIENVMLYATKPTE 230
Query: 239 FYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKK-------------- 284
PH + ++K + +L+L + +R+
Sbjct: 231 VMV--SFPHQEQGPTVARFIIAQIK--QFFVSLELMNIGVQPVRRSKSLHSPRDSSKKGF 286
Query: 285 VSKINSTLLYCLSELGVW--------------LALKAAETISCYESDFFAWEQLDGFGET 330
V ++ + +Y L E G++ L + AET+S A +
Sbjct: 287 VKQLFNDFVYQLEEYGIYAASIAIISLIVEFDLKRRQAETLSVKLMHRTALTLCERIRHL 346
Query: 331 IIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRC 390
+++K E I + S + L++ K+ Y+ +DI C
Sbjct: 347 LVQKLRDMTDDDDGPDDDVNTENIIMNFSTPKIQRFLMSLKVS------FAYKDPKDICC 400
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVE 442
++FVER T + LL + + +++ G NS RK Q ++
Sbjct: 401 LVFVERRYTCKCIYGLLLNYINSTPELRNVLTPQFMVGRNSISPDFGNVLERKHQKSAIQ 460
Query: 443 EFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS 502
+FR G N+++ +S+LEEG+DVQ+CN VI+ D +T ++Q++GRAR + +++
Sbjct: 461 KFREGNANLMICSSVLEEGIDVQACNHVIILDHLKTFNMYVQTKGRARSPEAKFVVFTTE 520
Query: 503 GD-STTQSRLENYLASGNK----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATL 557
D T ++ Y + ++ +++ VL A + H + G +
Sbjct: 521 RDREKTCQQICQYRNAHDEIAEYLKERVLEQAMPELYEIEKHFQDVIKPYTNEYGAVLLP 580
Query: 558 SSSVSLIYFYCSRLPSDGYFKPTPK------------FHIN-KEMGICTLYLPNNCPIQT 604
S++++L++ YC ++P+D + P F +N K+ + ++ +P NC ++
Sbjct: 581 SNALTLLHRYCQKIPTDAFGFVIPWINLLEEGERNKLFGVNAKDKHVVSINMPLNCILRD 640
Query: 605 VI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA-------------- 647
I N + K +A +AC L+ +G L++ LP + E+ A
Sbjct: 641 TIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWNKYGD 700
Query: 648 -----QKRGNEPYNAEHPIYFPPELVNQSPQDTKITY--------HCYLIELKQHFNYDI 694
+G + + + P E + P+ ++ Y L E +H ++
Sbjct: 701 SVTATVNKGEKNKPRTYKTHCPLEFYDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNL 760
Query: 695 -SARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQIT 751
+ RN + +R +L + L +G L V + I N Q+ L +F
Sbjct: 761 QTPRNYAILLRNKLP---RLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQFHGM 817
Query: 752 LFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP-----STGQLIDWKTVATVL-FPRDN 805
+FR I+ + + +LD R + E YL++P + IDW+ + P+
Sbjct: 818 VFRDIL--KIWQPCFVLD----RRSKENSYLVVPLILDADQQKCIDWQLMTKFQKLPQGQ 871
Query: 806 GSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR 865
GS N+ A G + T N + +T V L S F
Sbjct: 872 GS--NVQQREQQPAPRPEDFEGKIVTQWYANY-------DKRMLVTKVHRELTPLS-FME 921
Query: 866 NNGSVTTYKKHYEERYGIQL---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISF 921
NN TY +YG ++ + L+ R + N+ + R + K + +++
Sbjct: 922 NNQQEKTYYDFTMSKYGNRIGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKV 981
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
L PELC + P L + F+PSI++R+ LL A +L+
Sbjct: 982 ILIPELCINLEFPGDL--WIKLIFLPSILNRMYFLLHAESLR 1021
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 192/470 (40%), Gaps = 123/470 (26%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1207 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1266
Query: 1042 KLGCEQKLPGFIRTESFDPK----------------MW---------------------- 1063
+ +P + T F P+ +W
Sbjct: 1267 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLALDD 1326
Query: 1064 ---IIPGD---------------NSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEA 1105
++ G+ N+GS+ D S F+ Y G+ + +K +AD +EA
Sbjct: 1327 EESLVKGNCSDIKYNCFVAGCRANAGSFY--DGSDFSSEVNYCVGQVTIANKVIADTLEA 1384
Query: 1106 LIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVN 1150
L+G + G L+ I ++ P + L+N
Sbjct: 1385 LLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLIN 1444
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++
Sbjct: 1445 HSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNT 1504
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN--------------- 1255
++PG LTD+RSA VNN A V+H LH IL + +L + I+
Sbjct: 1505 KMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTN 1564
Query: 1256 ------------------------------ITVDSFEKLSLGSTFGWESVTSFPKALGDI 1285
I+ ++ + + F + PK LGD+
Sbjct: 1565 YVHILLEEADVLPTPLDLDDELELPHANECISQEAEQGVPPKGEFNMSTNVDVPKTLGDV 1624
Query: 1286 IESLAGAIFVDSGCNR---EVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
+E+L AI++D R +V+F+ P L+ + +P+R+L E+
Sbjct: 1625 LEALIAAIYLDCRDLRRTWDVIFRLFEPELQEFT--RNVPINPIRQLIEH 1672
>gi|371486404|gb|AEX31247.1| Dicer 2 isoform A [Aedes albopictus]
gi|371486406|gb|AEX31248.1| Dicer 2 isoform B [Aedes albopictus]
Length = 1659
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 262/1064 (24%), Positives = 450/1064 (42%), Gaps = 167/1064 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ +++NTI++L TG+GKT IA+M ++ L KP F+V V
Sbjct: 14 RDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNTVA 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQAE + + Y D VD W W +E +K +V+V T QILLD L+ Y
Sbjct: 74 LAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHGYL 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ I +LI DECHH G+H IM +F L S+ PR+ G++ + ++ + +
Sbjct: 134 SIKHINLLIFDECHHGVGEHPMHGIMEQF----LRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST-AKFKFYKYDEIPHALYTHLADELA 258
Q ++ LE NS + T S + FST K YD + L+
Sbjct: 190 Q-VSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSL----------RLS 238
Query: 259 MIELKHTRSLENLD-----------LNEAQAELIR------KKVSKINSTLLYCLSELGV 301
+ + RS+E LN+ +A L++ K++ K+ + L+Y L + G+
Sbjct: 239 PVMVDIVRSIEAFSQTINDFHLPKYLNQNKA-LMKDRPKPLKEIKKLFTELVYQLGDTGL 297
Query: 302 W------LALKAAETISCYESDF----FAWEQLDGFGETI---IKKF--GSDASQALVTY 346
+ L L + +SD A F E++ I+K G D + L +
Sbjct: 298 FGCSIALLGLIVQFELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTRF 357
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
S L +++ +E + E + + ++FV+R +A VL +
Sbjct: 358 ------------------SSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHV 399
Query: 407 LSELLPRHCTWK---TKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + ++ G+N + Q S KK ++E F++ NVIV T++L
Sbjct: 400 LKIYFSQTEDADLILPDFMVGSNGSMPESIEQILSAKKDRRVIERFKKNETNVIVTTNVL 459
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL--- 515
EEG+D+Q CN VI +D +T S+ QS+GRARM++S Y++M+ + + Q LE Y
Sbjct: 460 EEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNEER--QKFLEKYRLYK 517
Query: 516 ASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSR 570
+ ++++ ++ PL+ ++ E + + + G S+V L+ YC
Sbjct: 518 SIEQELQRCLIGKTINRPDPLDADVHKELYNEIIPPFFTAKGAKLDALSAVQLLNRYCMG 577
Query: 571 LPSDGYFKPT---PKFHINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACK 624
+P D + + + + + LP ++ I NIK K++A AC+
Sbjct: 578 MPRDAFTNTNVTWERVDLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACR 637
Query: 625 KLHQIGALTDNLLP-----------DIV------VEKHDAQKRGNEPYNAEHPIYFPPEL 667
KL++ L+++L+P D+ ++ + G + H I +P +
Sbjct: 638 KLYENKELSEHLIPIDCRNQLHNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQT 697
Query: 668 VNQSPQDTKITYHCYLIELKQHFNYDISARNIVL------------AMRTELESEIKKVN 715
P+ K Y Y++ + F D S N+ + M T+ + K+
Sbjct: 698 TGCFPEPGKPCY-IYVLRIGAGFEQDPSNENVNIFHSLYNSENNFGIMTTKPLPVLAKMK 756
Query: 716 FDLEVERGRLTVNLKHLGRIQLIPN-----QVLLCRRFQITLFRVIMDHNLDKLNEILDG 770
F V G + V+L + +PN ++ L R+F +T+FR ++ D L + D
Sbjct: 757 F--FVTLGLINVHLVETPIV--LPNAGSEVELALLRQFHVTVFRDVLRLWKDFL--VYD- 809
Query: 771 FELRDNLEIDYLLLP-STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPL 829
DN +L++P +DW+ + + + S+ STM +R+
Sbjct: 810 ---YDNGINSFLVVPLKKSTHLDWELIRQFQYLSEPPSE----MSTMARSRMDFEADN-- 860
Query: 830 CTCKIHNSLVCTP----HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQL 885
+ V P + Q Y +T V HL S F N +Y ++ E Y + +
Sbjct: 861 -----YRHKVILPWYKNNKEQPYVVTMVHEHLTPGSPFP--NAEYGSYANYFSEAYHLAV 913
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFY 941
+ L+ + I N L+ + K + L PELC P +
Sbjct: 914 VKPDQFLIEVKGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPELCHNYQFPADY--WL 971
Query: 942 SFTFVPSIMHRLQSLLLA----VNLKNMLLDHCMQNVTIPTIKV 981
T +PS +HR+ LLLA V+L C++N TI + V
Sbjct: 972 KATLLPSALHRIHYLLLAEKIRVDLATGANVGCLENHTIEDVDV 1015
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 206/436 (47%), Gaps = 83/436 (19%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV + +L+AITTK + F LE E LGD+FLK+A S L K ++ HEG L+ K
Sbjct: 1168 NVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1227
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPK------MWIIPGDNSGSYE------------ 1074
+I+SN L + LPG ++ FDPK + +P + + +
Sbjct: 1228 QIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRL 1287
Query: 1075 -LNDDSLFNG-----------RKIYVTG-------------RKKVKSKTVADVVEALIGA 1109
+ D+ + G ++ + G ++ + KT AD +EAL+G
Sbjct: 1288 TMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGV 1347
Query: 1110 FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-------------VNVRHLES 1156
+ T G L G+ +V ++ +RL N +ES
Sbjct: 1348 CVQTVGMQRSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIES 1407
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + P +SPG
Sbjct: 1408 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1467
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRINITV 1258
LTD+RSA VNN A V+HGLH +IL S HE+ ++N+ V
Sbjct: 1468 LTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLV 1527
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL--EPMI 1316
+ ++ PKALGD+ ESL A+F+DSG + V ++ I ++ E M
Sbjct: 1528 EESDR-------KMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMGNEIMT 1580
Query: 1317 TPETMRFHPVRELTEY 1332
E VR+L E+
Sbjct: 1581 FTENTPIQIVRQLYEF 1596
>gi|371486408|gb|AEX31249.1| Dicer 2 [Aedes albopictus]
Length = 1625
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 259/1047 (24%), Positives = 440/1047 (42%), Gaps = 167/1047 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ +++NTI++L TG+GKT IA+M ++ L KP F+V V
Sbjct: 14 RDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNTVA 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQAE + + Y D VD W W +E +K +V+V T QILLD L+ Y
Sbjct: 74 LAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHGYL 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ I +LI DECHH G+H IM +F L S+ PR+ G++ + ++ + +
Sbjct: 134 SIKHINLLIFDECHHGVGEHPMHGIMEQF----LRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST-AKFKFYKYDEIPHALYTHLADELA 258
Q ++ LE NS + T S + FST K YD + L+
Sbjct: 190 Q-VSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSL----------RLS 238
Query: 259 MIELKHTRSLENLD-----------LNEAQAELIR------KKVSKINSTLLYCLSELGV 301
+ + RS+E LN+ +A L++ K++ K+ + L+Y L + G+
Sbjct: 239 PVMVDIVRSIEAFSQTINDFHLPKYLNQNKA-LMKDRPKPLKEIKKLFTELVYQLGDTGL 297
Query: 302 W------LALKAAETISCYESDF----FAWEQLDGFGETI---IKKF--GSDASQALVTY 346
+ L L + +SD A F E++ I+K G D + L +
Sbjct: 298 FGCSIALLGLIVQFELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTRF 357
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
S L +++ +E + E + + ++FV+R +A VL +
Sbjct: 358 ------------------SSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHV 399
Query: 407 LSELLPRHCTWK---TKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + ++ G+N + Q S KK ++E F+R NVIV T++L
Sbjct: 400 LKIYFSQTEDADLILPDFMVGSNGSMPESIEQILSAKKDRRVIERFKRNETNVIVTTNVL 459
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL--- 515
EEG+D+Q CN VI +D +T S+ QS+GRARM++S Y++M+ + + Q LE Y
Sbjct: 460 EEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNEER--QKFLEKYRLYK 517
Query: 516 ASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSR 570
+ ++++ ++ PL+ ++ E + + + G S+V L+ YC
Sbjct: 518 SIEQELQRCLIGKTINRPDPLDADVHKELYNEIIPPFFTAKGAKLDALSAVQLLNRYCMG 577
Query: 571 LPSDGYFKPT---PKFHINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACK 624
+P D + + + + + LP ++ I NIK K++A AC+
Sbjct: 578 MPRDAFTNTNVTWERVDLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACR 637
Query: 625 KLHQIGALTDNLLP-----------DIV------VEKHDAQKRGNEPYNAEHPIYFPPEL 667
KL++ L+++L+P D+ ++ + G + H I +P +
Sbjct: 638 KLYENKELSEHLIPIDCRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQT 697
Query: 668 VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTV 727
P+ K Y Y++ + F D S N+ + + SE
Sbjct: 698 TGCFPEPGKPCY-IYVLRIGAGFEQDPSNENVNI-FHSLYNSE----------------- 738
Query: 728 NLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP-S 786
+ G + P VLL R+F IT+FR ++ D L + D DN ++++P
Sbjct: 739 --NNFGIMTTKPLPVLL-RQFHITVFRDVLRLWKDFL--VYD----YDNGINSFMVVPLK 789
Query: 787 TGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP---- 842
+DW+ + + + S+ STM +R+ + V P
Sbjct: 790 KSTHLDWELIRQFQYLSEPPSE----MSTMARSRMDFEADN-------YRHKVILPWYKN 838
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQ 902
+ Q Y +T V HL S F N +Y ++ E Y + + + L+ + I
Sbjct: 839 NKEQPYVVTMVHEHLTPGSPFP--NAEYGSYANYFSEAYHLAVVKPDQFLIEVKGITSYL 896
Query: 903 NYLSKCRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
N L+ + K + L PELC P + T +PS +HR+ LLL
Sbjct: 897 NRLNPGVEDDGKSTRSKHWRFNEILIPELCHNYQFPADY--WLKATLLPSALHRIHYLLL 954
Query: 959 A----VNLKNMLLDHCMQNVTIPTIKV 981
A V+L C++N TI + V
Sbjct: 955 AEKIRVDLATGANVGCLENHTIEDVDV 981
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 212/456 (46%), Gaps = 92/456 (20%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV + +L+AITTK + F LE E LGD+FLK+A S L K ++ HEG L+ K
Sbjct: 1134 NVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKG 1193
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPK------MWIIPGDNSGSYE------------ 1074
+I+SN L + LPG ++ FDPK + +P + + +
Sbjct: 1194 QIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRL 1253
Query: 1075 -LNDDSLFNG-----------RKIYVTG-------------RKKVKSKTVADVVEALIGA 1109
+ D+ + G ++ + G ++ + KT AD +EAL+G
Sbjct: 1254 TMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGV 1313
Query: 1110 FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL-------------VNVRHLES 1156
+ T G L G+ +V ++ +RL N +ES
Sbjct: 1314 CVQTVGIQRSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIES 1373
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
+L Y F+D + L++ALTH SY I YQ+LEFLGDAVLD+LI++Y++ + P +SPG
Sbjct: 1374 ILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQ 1433
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRINITV 1258
LTD+RSA VNN A V+HGLH +IL S HE+ ++N+ V
Sbjct: 1434 LTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLV 1493
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL--EPMI 1316
+ ++ PKALGD+ ESL A+F+DSG + V ++ I ++ E M
Sbjct: 1494 EESDR-------KMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGIMGNEIMT 1546
Query: 1317 TPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKA 1352
E VR+L E+ KP S I +A
Sbjct: 1547 FTENTPIQIVRQLYEF---------KPPCSPIFSRA 1573
>gi|254281220|ref|NP_001123390.2| endoribonuclease Dicer [Xenopus (Silurana) tropicalis]
gi|238064965|sp|B3DLA6.2|DICER_XENTR RecName: Full=Endoribonuclease Dicer
gi|169261418|gb|ACA52289.1| endoribonuclease [Xenopus (Silurana) tropicalis]
Length = 1893
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 211/722 (29%), Positives = 317/722 (43%), Gaps = 135/722 (18%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L +GSGKT IA++L + +Y +R +
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNT 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ HTDLKVG+Y W W E H+VLVMT
Sbjct: 84 KRTVFLVNSEKQVSQQVSAVRTHTDLKVGEYSDQEKTQCWAKERWYLEFETHQVLVMTCH 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
I L+ L+ L+ I +L+ DECH A H Y IM ++ E+ PRI G+TA
Sbjct: 144 IFLNVLKSGNVSLSNINLLVFDECHLAIQDHPYREIM-----KICESCQP-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH- 247
S + K +D +KI LE ++ S T VL + ++ D P+
Sbjct: 198 SILNGKCDP--RDLEEKIQKLEEILRSNAETATDLVVLDRY----ASQPCEIVLDCGPYI 251
Query: 248 ---ALYTHLADELAMIELKHTRSLENL-DLN------EAQAELIRKKVSKINSTLLYCLS 297
LY L +EL +L L D N E + LI K++ T+L
Sbjct: 252 DKSGLYQRLLNEL-------DEALNFLIDCNISTHSKERDSTLISKQILSDCQTVLLV-- 302
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGA 351
LG W A K A + + EQ + F +TI++K + +
Sbjct: 303 -LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTILRKIHALCEEHF-------- 353
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 -------SPASLDMKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSE 406
Query: 387 ------------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWK 418
+I C IIFVER TA+VL L+ E P
Sbjct: 407 DDDDEDEEIEEKEKTETSFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYIS 466
Query: 419 TKYIAGNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+ +I G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV
Sbjct: 467 SNFITGHGIG-KNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLV 525
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHA 529
+ FD S++QS+GRAR S+Y+++ S + L+ Y A +R +
Sbjct: 526 VRFDLPSEYRSYVQSKGRARAPISNYIMLADSDKIKAFEEDLKTYKAIEKILRNKC--SK 583
Query: 530 SLPCS-----PL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
S+ C P+ ++ ++ + T+++++ I YC+RLPSD + PK
Sbjct: 584 SIDCGNTESEPIVDDDEIFPPYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK 643
Query: 583 FHINK---EMGICTLYLPNNCPIQTVIAQGNI---KTLKQAACLEACKKLHQIGALTDNL 636
+ + TLYLP N P++ I + + +A L CKKLH+IG L D+L
Sbjct: 644 CKTREFPDGLYRSTLYLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHL 703
Query: 637 LP 638
+P
Sbjct: 704 MP 705
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 173/370 (46%), Gaps = 82/370 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 1528 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPEVRKLVTNTNVISASSSYQNS 1587
Query: 1131 -----------------------DFVNVPYQRQFQVHAERLVNVRHL-------ESLLNY 1160
++ +P + F+ H + + HL E +NY
Sbjct: 1588 TRDNCTLTARTNTDLSSCKGIDYGYLKIPPRCMFE-HPDAEKTLDHLISGFENFEKKINY 1646
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1647 PFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1706
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES---- 1274
RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1707 RSALVNNTIFASLAVKYDYHKYFKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRR 1762
Query: 1275 ---------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKA+GDI ESLAGAI++DSG + E V+ P+++P+I +
Sbjct: 1763 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPR 1822
Query: 1324 HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1823 SPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAA 1876
Query: 1383 KEVLKSLRAS 1392
+ L+SL+A+
Sbjct: 1877 RRALRSLKAN 1886
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1333
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG------DNSGSYELNDDSLFNGRKIYVTGR 1091
+LG ++ P + FDP + W+ PG NS +E N+ S G + V G+
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETS---GEDVMVNGK 1388
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 1143 VHAERLVNVRHLESLLNYSFRDPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLD 1198
+H + ++ RH L +P L+++ALT + L +RLE LGD+ L
Sbjct: 1252 MHYDSGLSNRHSSKTLG---PNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLK 1301
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+ IT YL+ YP G L+ MRS V+N
Sbjct: 1302 HAITTYLFCTYPDAHEGRLSYMRSKKVSN 1330
>gi|344248388|gb|EGW04492.1| Endoribonuclease Dicer [Cricetulus griseus]
Length = 1907
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 211/715 (29%), Positives = 323/715 (45%), Gaps = 122/715 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCY 143
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+TA
Sbjct: 144 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLTA 197
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL +++ + D P
Sbjct: 198 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDR---YASQPCEIV-VDCGPFT 251
Query: 249 LYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L + L M EL+ + N D N E + LI K+ I S L LG W
Sbjct: 252 DRSGLYERLLM-ELEEAINFIN-DCNVSVHSKERDSTLISKQ---ILSDCRAVLVVLGPW 306
Query: 303 LALKAAETISCYESDFFAWEQLDG------FGETIIKKFGSDASQALVTYVPSGAEWSIG 356
A K A + + EQ + F +T+++K + +
Sbjct: 307 CADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEHF------------- 353
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVE------------------------------ 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 354 --SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDD 411
Query: 387 ------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAG 424
+I C IIFVER TA+VL L+ E P + +I G
Sbjct: 412 EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG 471
Query: 425 NNSGI-QCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G Q +S+ +KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD
Sbjct: 472 HGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPT 531
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEV-LSHA 529
S++QS+GRAR S+Y+++ + D T +E L NK K V + A
Sbjct: 532 EYRSYVQSKGRARAPISNYVMLADTDKIQSFEEDLKTYKAIEKILR--NKCSKSVDGAEA 589
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-- 587
+ ++ ++ + G T+++++ + YC+RLPSD + PK +
Sbjct: 590 DVDAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTQELP 649
Query: 588 -EMGICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I G ++ ++ L C+KLH+IG L ++L+P
Sbjct: 650 DGTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP 704
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 173/373 (46%), Gaps = 82/373 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV + P Q F
Sbjct: 1540 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQ 1599
Query: 1145 ----------------------------------------AERLVN-----VRHLESLLN 1159
AE+ +N + E +N
Sbjct: 1600 QKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKIN 1659
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD
Sbjct: 1660 YRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1719
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES--- 1274
+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1720 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELR 1775
Query: 1275 ----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P++ P+I +
Sbjct: 1776 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVP 1835
Query: 1324 -HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1836 RSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAA 1889
Query: 1382 CKEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1890 ARRALRSLKANQP 1902
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1380
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1283 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1335
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1336 MRSKKVSN 1343
>gi|242019168|ref|XP_002430037.1| dicer-1, putative [Pediculus humanus corporis]
gi|212515099|gb|EEB17299.1| dicer-1, putative [Pediculus humanus corporis]
Length = 701
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 190/649 (29%), Positives = 309/649 (47%), Gaps = 69/649 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
RNYQ E +E A KQN+I++L TG+GKTLIAI +L S ++KP F+ V
Sbjct: 3 RNYQAELIEIAKKQNSIIYLPTGTGKTLIAIQVLLSKTQEIKKPYNEGGKRVFFIGATKV 62
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV Q A+ + HT K+G Y GDM VD W+ W E K +V+V+T +IL L L +
Sbjct: 63 LVYQLAKVLCTHTKFKIGYYTGDMNVDSWNKDIWLGEFLKKQVMVLTAEILKGLLTLKFI 122
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
I +++ DECHH H Y IM EF + DS LP I G++A+ +K + +
Sbjct: 123 GAENISLIVFDECHHGTLNHPYKRIMQEFK----DLPDSKLPLILGLSATLLKMNIKKT- 177
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
D + ++E +K+ + + S ++ ++ K Y + TH +E+
Sbjct: 178 -DIEISLREMEETYRAKIISISENSDITRYMSVCVEKILNYNLNT------THSINEVLS 230
Query: 260 IELKHTRSLE---NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
I + +E N L A+ L+ + + + LY + EL + L + + + C
Sbjct: 231 IYDDVIKVIEETLNFVLENARTSLLELGIFGGSLSALYYMIELD-KIRLLSTDPVHC--- 286
Query: 317 DFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLI 376
Q+ + +T + D + SG ++ SG K+ LI
Sbjct: 287 ------QILIYAKTELSMIMEDEEE-------SGQLI-------YDFSSG----KVKLLI 322
Query: 377 ESLLEYRGVE--DIRC-IIFVERVITAIVLQSLLSELLPRHC-----TWKTKYIAG---- 424
+++ +Y + D +C ++FV R TA++L ++ L R C + K +++
Sbjct: 323 DTIRDYFNSDNFDFKCGLVFVHRRQTALLLAFIMQRL--RGCDKNFESVKPEFMVASSYM 380
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
NN + SRKK NEI++ G +N+I AT+ILEEG+D+ +CNLVI FD + S+IQ
Sbjct: 381 NNDFVDI-SRKK-NEIMKRMASGELNLIFATNILEEGIDLPACNLVISFDFPKGYSSYIQ 438
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED 544
SRGRAR +NS Y + + + ++ Y + + + SLP L E
Sbjct: 439 SRGRARNENSIYYIFSDENEKKNEKLIDEYRDFEKTLNERIRGEISLPDVYLEKCNKNET 498
Query: 545 FYHV-ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGICTLYLPNNCP 601
V +S +++ + YC +LP D + P+ K EM L LP N
Sbjct: 499 ISIVGKSDAIFVDGCMAIACVEKYCGQLPQDMFTFLCPEIFYKKFGEMKRAFLKLPFNSG 558
Query: 602 IQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNL-LPDIVVEKHD 646
I VI + N+K K++ ++ K LH++ + D+L + + +EK D
Sbjct: 559 IPDVIEGDLKSNMKEAKKSVFMKTVKLLHELNLIDDSLNMRQLEIEKVD 607
>gi|80979103|gb|ABB54754.1| Dicer-2 [Drosophila simulans]
Length = 1537
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 253/1043 (24%), Positives = 443/1043 (42%), Gaps = 142/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDA-------------------QKRGNEPYNAEHP 660
+AC L+ +G L++ LP + E+ A +G + +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWHNYGDSVTATVNKGEKSKPRTYK 701
Query: 661 IYFPPELVNQSPQDTKITY--------HCYLIELKQHFNYDI-SARNIVLAMRTELESEI 711
+ P E + P+ ++ Y L E +H ++ + RN + +R +L
Sbjct: 702 THCPLEFYDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNLQTPRNYAILLRNKLP--- 758
Query: 712 KKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILD 769
+ L +G L V + I N Q+ L +F +FR I+ + + +LD
Sbjct: 759 RLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQFHGMVFRDIL--KIWQPCFVLD 816
Query: 770 GFELRDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
R + E YL++P + IDW+ + T G N+ A
Sbjct: 817 ----RRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSNVQQREQQPAPRPED 871
Query: 825 KSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQ 884
G + T N N + +T V L S F NN TY +YG +
Sbjct: 872 FEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMSKYGNR 923
Query: 885 L---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ + L+ R + N+ + R + K + +++ L PELC + P L +
Sbjct: 924 IGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPGDL--W 981
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A +L+
Sbjct: 982 IKLIFLPSILNRMYFLLHAESLR 1004
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 150/347 (43%), Gaps = 69/347 (19%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLTLDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
+PG LTD+RSA VNN A V+H LH IL + +L + I+ V+
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|80979111|gb|ABB54758.1| Dicer-2 [Drosophila simulans]
Length = 1564
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 253/1043 (24%), Positives = 443/1043 (42%), Gaps = 142/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDA-------------------QKRGNEPYNAEHP 660
+AC L+ +G L++ LP + E+ A +G + +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWHNYGDSVTATVNKGEKSKPRTYK 701
Query: 661 IYFPPELVNQSPQDTKITY--------HCYLIELKQHFNYDI-SARNIVLAMRTELESEI 711
+ P E + P+ ++ Y L E +H ++ + RN + +R +L
Sbjct: 702 THCPLEFYDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNLQTPRNYAILLRNKLP--- 758
Query: 712 KKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILD 769
+ L +G L V + I N Q+ L +F +FR I+ + + +LD
Sbjct: 759 RLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQFHGMVFRDIL--KIWQPCFVLD 816
Query: 770 GFELRDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
R + E YL++P + IDW+ + T G N+ A
Sbjct: 817 ----RRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSNVQQREQQPAPRPED 871
Query: 825 KSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQ 884
G + T N N + +T V L S F NN TY +YG +
Sbjct: 872 FEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMSKYGNR 923
Query: 885 L---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ + L+ R + N+ + R + K + +++ L PELC + P L +
Sbjct: 924 IGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPGDL--W 981
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A +L+
Sbjct: 982 IKLIFLPSILNRMYFLLHAESLR 1004
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 150/347 (43%), Gaps = 69/347 (19%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLTLDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
+PG LTD+RSA VNN A V+H LH IL + +L + I+ V+
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|452839019|gb|EME40959.1| hypothetical protein DOTSEDRAFT_56023 [Dothistroma septosporum
NZE10]
Length = 1549
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 299/654 (45%), Gaps = 79/654 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS---PFVAVFLVPK 77
R YQLE E A K+NTI L+TGSGKTLIA++LLRS L ++ + P ++ FLV
Sbjct: 102 REYQLELFERAKKENTIAVLDTGSGKTLIAVLLLRSVIDDELEKRAAGHAPKISFFLVAS 161
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ + + D KV + G VD W A W + +++V+V T IL L S
Sbjct: 162 VTLVYQQFSVLDCNLDHKVIRLCGADNVDRWTAAHWTQIFHENKVVVCTADILFQCLSRS 221
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ + I +LI DE HH + H YA I+ +FY + PRIFGMTASPI +KV
Sbjct: 222 FLSMKQINLLIFDEAHHTKKNHAYARIIKDFY---IPEQRELRPRIFGMTASPIDAKV-- 276
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D Q +LE+L++ K+ T S L+ I T + +YD +P +
Sbjct: 277 ---DVIQAASELESLLDCKIATTQDMS-LAEAIKRPTE--EILRYDALPQRCF------- 323
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK------AAETI 311
T L++L E+ + + LG W A + E
Sbjct: 324 ------ETSLLQDLKSRYGNIEVFASSFQRAAEVARH----LGRWCADNFLLHAFSHEKS 373
Query: 312 SCYESDF-FAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE 370
S Y + W G + QA Y+ + + D+ D L+
Sbjct: 374 SKYSVEVEKKWHARKGRQKVAELDEAVKEIQAATHYIQQRSH--VLDELSRTQD---LSS 428
Query: 371 KIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR--HCTWKTKYIAGNNS 427
K+ L L L++ R I+FV+R TA +L +L + L + + + ++ G+N
Sbjct: 429 KVRQLDHYLRLQFERESTHRAIVFVDRRYTARLLHNLYTRLRGQEGYEYLRGHFLIGSNG 488
Query: 428 GI---QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
G S ++Q + +FR+G +N + ATS+ EEGLDV CNLVI FD T+ ++Q
Sbjct: 489 GSIDEDSFSFRQQVMTLMKFRKGELNCLFATSVAEEGLDVPDCNLVIRFDMYNTMIQYVQ 548
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS--PLNNHMYG 542
SRGRAR Q+S ++ M+++G+ Q L N MR+ C P + + G
Sbjct: 549 SRGRARNQHSKFIHMIENGNCAHQQTLGEVRWQENSMRRF--------CDQLPEDRKLQG 600
Query: 543 -EDFYH-------------VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--N 586
ED V STG T +++ I + S +P+D P + +
Sbjct: 601 NEDHLEMLLDKEKNIQVRIVPSTGAKLTYGNALDYIANFVSAIPTDCDEPQHPTYEVMAR 660
Query: 587 KEMGICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLP 638
+ + LPNN P+++V+ + K K++A AC +L ++G LP
Sbjct: 661 GQKFQAEVMLPNNAPLRSVMGAVHAKKGLAKRSAAFNACIELLKLGYFDAYFLP 714
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 215/481 (44%), Gaps = 71/481 (14%)
Query: 869 SVTTYKKHYEERYGI----QLCFDREPLLNGRRIFHVQNYLSKCRQQKQK----EPSKIS 920
SV+ +KK +ER Q + E +L R+ L + RQ + +P +IS
Sbjct: 946 SVSLWKKARQERDATWSREQPVIEAEKILTQRKNMLAPPELKEVRQDTKAFLCVQPLRIS 1005
Query: 921 FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI- 979
+PPE + AP+ + P+I++R +S L++ N++ C +
Sbjct: 1006 -TIPPE----VAAPLFI--------WPAIIYRFESHLISQEGCNVVGVDCGPEFALAAFT 1052
Query: 980 ---------KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVK 1030
+V E + ++ + + E E +GD+FLK A + F N +E V+
Sbjct: 1053 KDSDNSGEHEVEERVNFQRGMGE-NYERFEFIGDTFLKTATTLSTFILNPNENEFEFHVR 1111
Query: 1031 KERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKI 1086
+ ++ N L + KL +IR+ F+ ++W G +G + + +++ +
Sbjct: 1112 RMLMLCNKNLFQTAMGLKLYEYIRSLPFNRRLWYPEGMKLLAGTGVVKGEEKVMWHQPRD 1171
Query: 1087 YVTGRKKVKSKTVADVVEALIGA---------------FLSTGGENVGLIFLDRIGI--- 1128
+ G KT+ADV EALIGA + S L+ D +
Sbjct: 1172 HPLG-----EKTIADVCEALIGAAFIAHDCPGDWKPEHWESAIRAVTKLVNNDDHKMQTW 1226
Query: 1129 ---KVDFVNVPYQRQFQVHAER-LVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEI 1182
K + YQ Q ++ L + LE L Y F+ P LL A H S +M ++
Sbjct: 1227 EDYKAAYAKPAYQMQEATAVQKDLADKVELEHL--YRFQYPRLLYSAFVHPSLPFMYEKV 1284
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
P YQRLEFLGDA+LD YL+ KYP P +LT+ + A V+N V G HKH
Sbjct: 1285 PN-YQRLEFLGDALLDMASISYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCVNIGFHKH 1343
Query: 1243 ILHASHELYKRIN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGC 1299
+ H +L ++ I + ++++ S W +V+ PK L DIIES GA+F+DS
Sbjct: 1344 LRHHHAKLEHQVREYAIELLEAKRVAGDSRDYWTTVSDPPKCLPDIIESYVGALFIDSDF 1403
Query: 1300 N 1300
N
Sbjct: 1404 N 1404
>gi|80979113|gb|ABB54759.1| Dicer-2 [Drosophila simulans]
Length = 1565
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 254/1048 (24%), Positives = 439/1048 (41%), Gaps = 152/1048 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDA-------------------QKRGNEPYNAEHP 660
+AC L+ +G L++ LP + E+ A +G + +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWHNYGDSVTATVNKGEKSKPRTYK 701
Query: 661 IYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEV 720
+ P E + P+ ++ Y Y I L+ F ++ L +RT I N
Sbjct: 702 THCPLEFYDARPRLGELCY-AYEIFLEPQFKLCEYTEHMYLNLRTPRNYAILLRN----- 755
Query: 721 ERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN--LDKLNEILDGFELRDNLE 778
L L + L NQ +L R V + ++ LD L++ G RD L+
Sbjct: 756 -------KLPRLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLDLLHQ-FHGMVFRDILK 807
Query: 779 I--------------DYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNA 819
I YL++P + IDW+ + T G ++ A
Sbjct: 808 IWQPCFVLDRRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSSVQQREQQPA 866
Query: 820 RIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEE 879
G + T N N + +T V L S F NN TY
Sbjct: 867 PRPEDFEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMS 918
Query: 880 RYGIQL---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPI 935
+YG ++ + L+ R + N+ + R + K + +++ L PELC + P
Sbjct: 919 KYGNRIGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPG 978
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
L + F+PSI++R+ LL A +L+
Sbjct: 979 DL--WIKLIFLPSILNRMYFLLHAESLR 1004
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 150/347 (43%), Gaps = 69/347 (19%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLTLDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
+PG LTD+RSA VNN A V+H LH IL + +L + I+ V+
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|158706448|sp|Q0UI93.2|DCL1_PHANO RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1522
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 196/657 (29%), Positives = 310/657 (47%), Gaps = 71/657 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQ+E A QNTI L+TG+GKT IA +LLR + + +A FLV
Sbjct: 70 RDYQMELFLRAKMQNTIAVLDTGTGKTHIATLLLRHVLEEELENRAKGCAHKMAFFLVDS 129
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA ++ D V G MG + TW + + + V+V T Q+L+D + S
Sbjct: 130 VNLVFQQANVLRCGLDQGVEGISGAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMHS 189
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ + +LI DE HHA+ H YA +M ++Y L+T S PRIF MTASP+ K S
Sbjct: 190 FMSISRMNLLIFDEAHHAKSNHPYARVMKDYYAHELDT--SKRPRIFAMTASPVDVKGQS 247
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
+E + +LETL++S++ T + ++ N I + A+YT L +E
Sbjct: 248 AEH-VREAARELETLLHSRIATTSDSALARNSITRPEEEV----------AVYTRLRNEF 296
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
L + D+ + I K+ SELG W + Y S
Sbjct: 297 E-TPLHQKVKAKYGDVAPFRKLFITAKLHA---------SELGRWAS-------DMYWSF 339
Query: 318 FFAWEQ---LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE---- 370
FA EQ L E + D S A + + + + ++ + + L+E
Sbjct: 340 AFADEQSRKLQIREELKYNRSKRDWSAAELDAQMARLKEATAFVQQYEIGAPTLSEQDLS 399
Query: 371 -KIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
K++ L L L Y RCI+FVE+ TA +L+ + + + N +G
Sbjct: 400 SKVMKLQYWLNLYYERTTLARCIVFVEKRHTAQLLKLIFDHIGGPNLHCDVLVGINNRAG 459
Query: 429 IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR 488
+ S + Q +++FRRG +N + ATS+ EEGLD+ CNLV+ FD RT+ ++QSRGR
Sbjct: 460 EENVSLRSQILTLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGR 519
Query: 489 ARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSH---------ASLPCSPLN 537
AR +NS YL M+++ + RL N N MR+ + L+H L
Sbjct: 520 ARHRNSKYLHMLEAENKEHTERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAELIALE 579
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS-DGYFKPTPKFHINKEMG------ 590
+ ++ Y E +G T SS+S++ + + PS D P + +N ++
Sbjct: 580 DKLFPS--YTDEKSGAKLTYRSSLSILSHFVATYPSPDHNTMAQPTYVVNPKISDDPRDP 637
Query: 591 -----ICTLYLPNNCPIQTVIAQ-GNIKTL-KQAACLEACKKLHQIGALTDNLLPDI 640
+C + LP +CPI +++ Q + KT+ K +A + C +L + L + LLP I
Sbjct: 638 QRNGFVCEVILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLPTI 694
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 216/474 (45%), Gaps = 57/474 (12%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRI--IMAPISLSTFYSFTFVP 947
+P+L +I +N+L+ +++KE + + + PE I + P + + +P
Sbjct: 938 QPVLQVEKIPFRRNHLANVEDKEKKELANLETYICPEPLHISNLATPFVVMCY----VLP 993
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH------------ 995
+I+HR +S L+A++ ++L ++ + LEA+T + H
Sbjct: 994 AIIHRFESYLIALDACDVL------DLKVSPALALEALTKDSDNSEEHGEEKINFKSGMG 1047
Query: 996 --LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGC-EQKLPGF 1052
E LE LGD FLK A S +F +E V++ ++ N L + ++KL +
Sbjct: 1048 PNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKLYKY 1107
Query: 1053 IRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA-FL 1111
+RT++F + W G L L + ++ + K+VADV EA IGA F+
Sbjct: 1108 VRTDAFSRRNWY----PEGLKLLRGKGLKKTEEDWLNVTHNLGDKSVADVCEAFIGAAFM 1163
Query: 1112 S--TGG--------ENVGLIFL-----DRIGIK-VDFVNVPYQRQFQVH---AERLVNVR 1152
GG E V + L D + K D+ + ++Q A +L
Sbjct: 1164 QHHKGGQWTPNDWDEAVKAVKLFANSDDHLMEKWTDYYAAYTKPKYQTAGATATQLDLAH 1223
Query: 1153 HLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+E Y FR P LL A H S +M IP YQRLEFLGD++LD ++L+ KYP
Sbjct: 1224 KIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIP-SYQRLEFLGDSLLDMAFIMHLFYKYP 1282
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN---ITVDSFEKLSLG 1267
P +LT+ ++ V+N VK G H H+ + L +I V+ E+ + G
Sbjct: 1283 DKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQIRDYVYEVEEAEREANG 1342
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
+ W SV+ PK L D+IE+ AIFVDS + VV + L+P T+
Sbjct: 1343 AVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVVQKFFDLHLKPFFLDMTL 1396
>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1519
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 305/638 (47%), Gaps = 73/638 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS---PFVAVFLVPK 77
R YQ+E E A QNTI L+TGSGKTLIA++LL+ L+ + + P ++ FLV
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA ++ + D V ++G MGVD W+ TW E K+ V+V T +IL L +
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y + I +L+ DE HH + H YA I+ + Y L S+ PRIFGMTASP+ +K
Sbjct: 230 YITMQQINLLVFDEAHHTKKDHPYARIIRDSY---LRVPPSSRPRIFGMTASPVDTK--- 283
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D + +LE L++SK+ T + ++L + + + + YD++ T +D
Sbjct: 284 --GDVLEAARNLEALLDSKIATTSKLTILRQVV--NRPNEEVWIYDKLQP---TFTSDLY 336
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
++E + ++ E R S++ + +C VW++ A + + E
Sbjct: 337 KLMESR----FGDISHLEPMFRFARHATSELGT---WCADR--VWVSALADDVLPKVEGS 387
Query: 318 FFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG---LLTEKIVC 374
Q G G+ + K D +T + +E +S D G L+ K+
Sbjct: 388 IGGKRQSTGLGQ-LPKDVHRD-----ITRIKEASELV---ESHPPNDPGAPEALSSKVRV 438
Query: 375 LIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNS----G 428
L + + + G E + +CI+F E+ TA VL L + L +P + + G S G
Sbjct: 439 LWKEISQCFGQETNTKCIVFTEKRYTAKVLFDLFTVLNVP---GLRPGVLIGVRSSDRIG 495
Query: 429 IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR 488
+ R++ +V FR G +N + AT++ EEGLD+ CNLV+ FD +T+ ++QSRGR
Sbjct: 496 MNVTFRQQILTMV-RFRTGEINCLFATAVAEEGLDIPDCNLVVRFDLYKTLIQYVQSRGR 554
Query: 489 ARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYG------ 542
AR +S Y M++ ++ +S L N K + S L P + ++G
Sbjct: 555 ARHADSTYASMIEKDNADHES----ILVQVNDAEKIMQSFCQL--LPEDRILHGNDDDTD 608
Query: 543 --------EDFYHVESTGTIATLSSSVSLIYFYCSRL--PSDGYFKPTPKFHINKEMGIC 592
E+ Y + ST T S+++++ Y S L +D + T + +C
Sbjct: 609 AVLDREEWEEPYTLPSTAARLTHHSAITVLARYASSLQYENDTSAQVTYVVLPVNDAYVC 668
Query: 593 TLYLPNNCPIQTVIAQGNIK--TLKQAACLEACKKLHQ 628
+ LP PI+ +K T K+ A EAC+ L +
Sbjct: 669 EVILPEKSPIRGATGMPAMKKSTAKRYAAFEACRLLRK 706
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 163/355 (45%), Gaps = 42/355 (11%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E LE LGD FLK A S LF + +++E V + +I N L +++L FIR+
Sbjct: 1072 ERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSR 1131
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGR----KIYVTGRKKVKSKTVADVVEALIGAFLS 1112
F W G +L GR KI + + KT+ADV EALIGA L
Sbjct: 1132 GFSRDTWYPEGL----------TLLQGRDHSKKIGSESKHALAEKTIADVCEALIGAALL 1181
Query: 1113 TGGE----NVGLIFLDRIGIK-----------VDFVNVP-YQRQFQVHAERLVNVRHLES 1156
T G ++G+ + + + ++P YQ Q +E + R +E
Sbjct: 1182 TPGPQHRFDMGVRAVSAVVDSNEHNAASWRDYISLYSIPKYQEQAPDGSE-IDLCRRVEE 1240
Query: 1157 LLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
L Y FR P LL A TH SY +P CYQ LEFLGDA+LD + L+ ++P P
Sbjct: 1241 KLGYHFRYPRLLHSAFTHPSYPSAWARVP-CYQSLEFLGDALLDMVCVEDLFRRFPDRDP 1299
Query: 1215 GYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG--- 1271
+LT+ + A V+N +VK GLH H+ + S L +I + + + S
Sbjct: 1300 QWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEAQAAASQSDVAVDY 1359
Query: 1272 WESVTSFPKA-LGDIIESLAGAIFVDSGCN---REVVFQS-IRPLLEPMITPETM 1321
W PK L D++E+ GA+FVDS EV FQ I+P M +T
Sbjct: 1360 WTLTQDPPKVCLPDMVEAYLGAVFVDSNFRFEEVEVFFQQHIKPYFHDMAIYDTF 1414
>gi|391348645|ref|XP_003748555.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1461
Score = 216 bits (551), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 232/833 (27%), Positives = 371/833 (44%), Gaps = 136/833 (16%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-------SPF--VAV 72
AR+YQ+E E A K NTIV L TG+GKT I+++L++ + + + P P V
Sbjct: 26 ARSYQIELFEFAKKHNTIVCLGTGTGKTFISVLLVKHFEHEVAGPWIEGSYGEPIGKRTV 85
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
FL P V LV QQ+ + H +KV Y G M D W W E +++ VLVMTP++
Sbjct: 86 FLAPSVPLVEQQSAVLAQHMTVKVASYVGSMDTDRWSSENWNREFNENGVLVMTPEVCRI 145
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPI 191
+ + + I +L+LDECH A G Y IM E Y L GD S PRI G+TAS +
Sbjct: 146 AIDHGFLPMENINLLVLDECHRATGDDPYVKIM-ENYANL---GDKSRRPRILGLTASVV 201
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYT 251
+KV E +KI DLE ++ + A S LS A+ K EI +
Sbjct: 202 NAKVQGFEVQ--KKIRDLEACLD----SVAKTSSLS-------AQNFGTKPTEIIVTHHP 248
Query: 252 HLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC-------LSELGVWLA 304
H A++ I+ LE+ A R+ + + ST C L E
Sbjct: 249 HDAEKQLPIDAAKMALLEDC----ADYTEFRRNMKALASTYHTCGPYCAKVLVEFREREL 304
Query: 305 LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD 364
KA + C + GF + KF + + L ++ G S+ D
Sbjct: 305 QKALQLPDCAQ----------GFKDHAHIKF--EIFKELYEFL--GDCPSLHD------- 343
Query: 365 SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW---KTKY 421
+ ++ L+E + + ++ ++FV+ + A VL + + +L ++ + +
Sbjct: 344 ---VPPRMTRLLEVIRRFEKT-NLSAVVFVKERLVAYVLYNWMRQLSVEDSSFAFIRCSF 399
Query: 422 IAGNNS-----GIQCQS----RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
I G I +S K QN++++ FR G N++ ATS++EEG+DV +CNL+I
Sbjct: 400 IVGQAQINYAREIDPESLKMNSKAQNKVMKNFRNGEYNLMFATSVIEEGMDVPACNLIIR 459
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS-TTQSRLENYLASGNKMRKEVLSHASL 531
FDP V S+ QS+GRAR + S Y+++ D T++ L++Y + + K +
Sbjct: 460 FDPPMDVRSYTQSKGRARAKPSLYVVLSSESDRLMTEALLDSYQETEQLVMKCCGTERIA 519
Query: 532 PCSPLNNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK- 587
P + + +D +V I T S++S+IY YC R Y P F + +
Sbjct: 520 PTAFETAEKFVDDPDLPPYVYGRARI-TAKSAISIIYGYCQRFMRLKYPNLFPFFDMEET 578
Query: 588 -EMGICTLYLPNNCPIQTVIAQ-----GNIKTLKQAACLEACKKLHQIGALTDNLLP--- 638
+ +CTL +P CP++ I+ + K LE CK+LHQ G L DNLLP
Sbjct: 579 PDGFVCTLSMPIVCPVKEKISNRARPFPSKDKAKSYVALEMCKRLHQCGELADNLLPRRM 638
Query: 639 ------------------DIVVE------KHDAQKRGNEPYNAEHPIYFPPELVNQSPQD 674
D+ E K +KR P + E V+ P D
Sbjct: 639 YTNLYKLHTRPEDVNPKEDLKKEMLVTRCKAGEKKRYVLPRKRASILELKEEGVDCDPLD 698
Query: 675 TKITYHCYLIELK--------QHFNYDISARNI------VLAMRTELESEIKKV-NFDLE 719
T YH Y+I + Q++ D + + +R++ +E++ V F +
Sbjct: 699 T---YHLYVIRTEVVSWTAKEQNWRGDPVFDPVKYPTWLAIVLRSK-SNEMQSVPKFPIF 754
Query: 720 VERGRLTVNLKHLGRIQLIPNQVL-LCRRFQITLFRVIMDHNLDKLNEILDGF 771
G V+ ++ G Q+ +++ LC RF +F +++D + LN + GF
Sbjct: 755 TRSGEECVSFEYAG-AQIFDDELKSLCARFNRYVFSIVLDVKDNLLNPVA-GF 805
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 156/359 (43%), Gaps = 73/359 (20%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+++A+TT+ C+E F LE LE LGDSFL+ ++ + Y + L+V ++ ++N+ L
Sbjct: 1089 LMKALTTRGCEEIFDLERLELLGDSFLQIVSTFAVMDWYPDKSISELNVLRQYEVNNSHL 1148
Query: 1041 CKLGCEQKL----------------PGFIRTESFDPKM------------WIIPG----- 1067
E+ L P RT F+ K+ W
Sbjct: 1149 LYRAHEKGLTQVLEAQPFRASYNFLPFGHRTAPFEQKLLQREFLCCLVKHWGFEAVSSVP 1208
Query: 1068 ------------------DNSGSYELN---DDSLFNGR------KIYVTGRKKVKSKTVA 1100
SG ++N D+ +++ +I V K+K
Sbjct: 1209 RLKDLRFCKNIQEALNHFAESGEEKINAYVDEKIYDSEDLPKRHEIPVRSFHDFKAKIGG 1268
Query: 1101 DVVEALIGAFLSTGGENVGLIFLDRIGIK---------VDFVNVPYQRQFQVHAERLVNV 1151
DVVEA+ G +L G L F IG +D + + +V E++
Sbjct: 1269 DVVEAMAGVYLEKCGPVGALRFFKWIGKDFGDTETNNFLDAFKLDFSAAQKVPPEQMRQY 1328
Query: 1152 RHL----ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
HL E + Y F+ L ++A+TH S + +L F+G+AV+DYL+T+Y+Y
Sbjct: 1329 SHLIDKVERQVGYKFKSRGLALQAITHHSCREHLLTDDMDKLAFVGEAVIDYLLTLYIYG 1388
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
L+PG LTD+RSA +N A + V+ LH +LH S++L+ I + +FE + L
Sbjct: 1389 LSTSLNPGQLTDLRSALINKQVTAYAVVRAELHTVLLHTSNKLFSAIKKYLSNFEDIGL 1447
>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control
protein dcr1; AltName: Full=RNA interference pathway
protein dcr1; Includes: RecName: Full=Endoribonuclease
dcr1; Includes: RecName: Full=ATP-dependent helicase
dcr1
gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
Length = 1374
Score = 216 bits (551), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 192/662 (29%), Positives = 315/662 (47%), Gaps = 79/662 (11%)
Query: 13 EVSADTLP-FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPSPF 69
++S+ LP R YQ + A KQNT++ + TG+GKTL+A+ L++ +L + S
Sbjct: 2 DISSFLLPQLLRKYQQDVYNIASKQNTLLVMRTGAGKTLLAVKLIKQKLEEQILIQESNL 61
Query: 70 ----VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM 125
++VFLV KV LV QQAE I+ KVG ++G++ ++ + + K+ V+V+
Sbjct: 62 EHKKISVFLVNKVPLVFQQAEYIRSQLPAKVGMFYGELSIEMSE-QLLTNIILKYNVIVI 120
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHR---LLETGDSNLPR 182
T + L + +N + ++I DECHHA G YA IM +FYHR +L LPR
Sbjct: 121 TADLFYLFLARGFLSINDLNLIIFDECHHAIGNDAYARIMNDFYHRAKAVLSKKHFTLPR 180
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
IFGMTASP K + + + +++ E L +SK + SE+ L+++
Sbjct: 181 IFGMTASPFTGK----KGNLYHRLYQWEQLFDSKAHV-VSENELADYFC----------- 224
Query: 243 DEIPHALYTHLADELAM-----IELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+P Y +++L + I K +L+ L +S+ T L
Sbjct: 225 --LPEESYVMYSNKLVVPPSDSIIKKCEETLQGCKL-----------ISRAVKTALAETI 271
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
++G+W E + Y DF ++L + + K+ D A+ +W
Sbjct: 272 DMGLWFG----EQVWLYLVDFVETKRLKK--KALGKQLSDDEELAIDRLKIFVEDWK--- 322
Query: 358 DSKFN--------LDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLS 408
++K++ DS +T+K+ L+E L YR + +R +IFVER TA L +
Sbjct: 323 NNKYSDNGPRIPVFDSTDVTDKVFKLLELLKATYRKSDSVRTVIFVERKATAFTLSLFMK 382
Query: 409 EL-LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
L LP ++ G + ++Q + + +F+ G NV++AT++ EEG+DV SC
Sbjct: 383 TLNLPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSC 442
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS 527
NLVI F+ RTV ++QSRGRAR S +L+ + + + R+ + K LS
Sbjct: 443 NLVIRFNICRTVTQYVQSRGRARAMASKFLIFLNTEELLIHERIL-HEEKNLKFALSELS 501
Query: 528 HA----SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF 583
++ SL C + + Y V TG + T +VSL+Y +C+ L D Y + P F
Sbjct: 502 NSNIFDSLVCEE-RERVTDDIVYEVGETGALLTGLYAVSLLYNFCNTLSRDVYTRYYPTF 560
Query: 584 HINKEMGICTLY---LPNNCPIQTVIAQG----NIKTLKQAACLEACKKLHQIGALTDNL 636
+ + LP C + AQG +I+ KQ A C L ++G + +L
Sbjct: 561 TAQPCLSGWYCFEVELPKACKVPA--AQGSPAKSIRKAKQNAAFIMCLDLIRMGLIDKHL 618
Query: 637 LP 638
P
Sbjct: 619 KP 620
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 196/396 (49%), Gaps = 31/396 (7%)
Query: 930 IIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKK 989
+ + P+S S +PSI++ +++LL+A + ++H + I T +A+T+ +
Sbjct: 869 LYILPVSRHLKNSALLIPSILYHIENLLVA----SSFIEHFRLDCKIDT--ACQALTSAE 922
Query: 990 CQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKL 1049
Q +F + LE GD FLK AS +F + + E L +++IISN L K+ + +L
Sbjct: 923 SQLNFDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCEL 982
Query: 1050 PGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA 1109
P + + + + W G + + K +K+ K +AD+VEA IGA
Sbjct: 983 PKYALSTPLEIRHWCPYGFQKSTSD----------KCRYAVLQKLSVKRIADMVEASIGA 1032
Query: 1110 FLSTGGENVGLIFLDRIGIKV-DFVNVPYQRQF---QVHAERLVNVR-----HLESLLNY 1160
L G + L + + + D N + +A+ L NV+ ++E + Y
Sbjct: 1033 CLLDSGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYADSLRNVQFPYSSYIEETIGY 1092
Query: 1161 SFRDPSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
SF++ LL A H S M + I YQ+LEFLGDAVLDY+I YLY KYP + G LTD
Sbjct: 1093 SFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTD 1152
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRI---NITVDSFEKLSLGSTFGWESVT 1276
+S V N + LHK+I H S + I +++F + + + + W +
Sbjct: 1153 YKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASENPWFWFEID 1212
Query: 1277 SFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
S PK + D +E++ AIF+DSG + + + Q + PL
Sbjct: 1213 S-PKFISDTLEAMICAIFLDSGFSLQSL-QFVLPLF 1246
>gi|198457361|ref|XP_001360634.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
gi|198135949|gb|EAL25209.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
Length = 1720
Score = 216 bits (550), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 175/670 (26%), Positives = 315/670 (47%), Gaps = 64/670 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N I++L TGSGKT +AI+ L+ ++ + K A+F+ V
Sbjct: 9 RSYQLRLVDHITKNNGIIYLPTGSGKTYVAILALKRFSKDMDKSIEEGGKRAIFMCNTVE 68
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ ++LKVG + G+ GVD W W E+S +VLV T Q++L+ + Y
Sbjct: 69 LARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVGTAQVMLNMVTQKYL 128
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+L+ + ++I+DECHH G H Y M F LL ++ LPR+ G+T IK +
Sbjct: 129 ELSSVSIVIIDECHHGTGHHPYHEFMHLF---LLADRNTPLPRVVGLTGVLIKG---NEF 182
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK-FYKYD------EIPHALY-- 250
+ QK+ +LET S + T + L N + +ST + Y EI HA++
Sbjct: 183 KLVAQKLRELETTYRSNIITVSDTEELKNVMLYSTKPRECLVTYPNQVGSLEIGHAIHRC 242
Query: 251 -THLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
H L +E+ + + L+ + + + + + Y L GV+ A A
Sbjct: 243 IEHFYVRLDDLEIGKQPTRYSKGLSTLRDPHKKGYIKTLLNDFQYQLENYGVYAAAMAIV 302
Query: 310 T------ISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
+ I ++S+ A + + + + L V E DD+
Sbjct: 303 SVILEFEIKLHQSETLALTHIYKLAICMCNRINHMLKKKLRDLVDDDTE---PDDAVHTE 359
Query: 364 D-----SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ S ++ + ++ + +DI C++FVER T+ + LL + + +
Sbjct: 360 ETIINFSTPKVQRFLHYVQKTFSGKNAKDICCLVFVERRYTSKCIYQLLKKFIAAIPALR 419
Query: 419 T----KYIAGNNS-GIQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+++ G NS C+S RK Q + +F+ G N++V +S+LEEG+DV++CN V
Sbjct: 420 DVLVPQFMVGRNSVTADCESVLERKWQKSAIHQFKDGEANLMVCSSVLEEGIDVKACNYV 479
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLM------VKSGDSTTQSRLENYLASGNKMRKE 524
++ DP +T ++Q++GRAR +++ ++L +K+ Q R + + G ++
Sbjct: 480 LILDPIKTFNMYVQTKGRARSKDAQFVLFSSDLDRIKTNQQINQYR-QAHTDIGEYLKDR 538
Query: 525 VLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD--GYFKP--- 579
VL A + +H + + G + SS++ L++ YC LPSD G+ +P
Sbjct: 539 VLDRAEPLMQEIADHFHELIPPFINEKGAVLLPSSALILLHRYCQSLPSDAFGFVEPWIT 598
Query: 580 TPKFHINKEM--------GICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQ 628
+ +E+ ++ LP + ++ + ++K K +A + C KL+
Sbjct: 599 LISWDQKRELFGTQAASKEFVSIELPLSSSVRDIFYSDPMTSVKAAKISAAFKTCIKLYS 658
Query: 629 IGALTDNLLP 638
G L + LP
Sbjct: 659 TGELNERFLP 668
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 193/460 (41%), Gaps = 110/460 (23%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AITT + + +E E LGDSFLK +AS L Y + +EG L+ K R++SN L
Sbjct: 1203 LAAITTAGSADVYDMERAELLGDSFLKMSASLYLASRYPDWNEGTLTQVKSRLVSNKNLM 1262
Query: 1042 KLGCEQKLPGFIRTESFDPKM-WIIPG-----------------------DNSGSYELND 1077
E +P I FDP++ W+ P N L+D
Sbjct: 1263 YCLRETDIPSRISCSLFDPRLTWLPPSINLPEDVLDVWTEQPSFAKLIGPHNLFDLALSD 1322
Query: 1078 DSLFNGR-----------------KIYVTGRK------------KVKSKTVADVVEALIG 1108
+ + GR + Y GR V++K +AD +EAL+G
Sbjct: 1323 EEILAGRCNEDTYRRFVHGCKSNQQGYYAGRDFSSGVNYFFGEVTVQNKVMADTLEALLG 1382
Query: 1109 AFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVRH 1153
+ G G L+ GI V+ P + + + L+N +
Sbjct: 1383 VIVRNYGLQHGFRMLEYFGICKPDVDKPLSQLLDLQLKSTKMRANASPGDIDGFLINHSY 1442
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE L Y FRD L++ALTH S+ + CYQ LEF+GDA+LD+LI+ Y++ L
Sbjct: 1443 LEQNLGYKFRDRGYLLQALTHPSFPTNRLTGCYQELEFIGDAILDFLISAYIFENNNKLR 1502
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN------------------ 1255
PG LTD+RSA VNN V+H LH IL + L + I+
Sbjct: 1503 PGELTDLRSALVNNTTLGCICVRHKLHLFILAENALLSETISKFVKFQESQGHRVTNHVR 1562
Query: 1256 ----------ITVDSFEKLSLG-----------STFGWESVTSFPKALGDIIESLAGAIF 1294
+ +D E++ + F PKALGD++E+L A++
Sbjct: 1563 FLLEERDVQPVILDLDEEVEMAMENDSGDGPPIGAFNLAQNVDVPKALGDVLEALIAAVY 1622
Query: 1295 VDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEY 1332
+D + + +Q I L EP + + + P+R+L E+
Sbjct: 1623 MDCR-DLQTTWQMIYHLFEPELKEFSQNIPISPIRQLHEH 1661
>gi|194755862|ref|XP_001960198.1| GF13246 [Drosophila ananassae]
gi|190621496|gb|EDV37020.1| GF13246 [Drosophila ananassae]
Length = 1727
Score = 216 bits (550), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 223/875 (25%), Positives = 388/875 (44%), Gaps = 134/875 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ +QN I++L TGSGKT +AI+ L+ ++ + K A+F+ V
Sbjct: 14 RSYQLRLVDHITRQNGIIYLPTGSGKTFVAILALKRFSQDMDKTIEDGGKRAIFMCNTVE 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA AIK T+LKVG Y G+ GVD W W+ E+ +V+V T Q++LD +
Sbjct: 74 LARQQAVAIKRFTNLKVGFYVGEQGVDDWPRGQWETEIRDKQVMVGTAQVMLDVFTQRHM 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASPIKSKVSSS 198
+L + ++I+DECHH G H + M RL G SN LPR+ G+T IK +
Sbjct: 134 ELKSVSIVIIDECHHGTGHHPFHEFM-----RLFLYGSSNELPRVVGLTGVLIK---GNE 185
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY--------KYD---EIPH 247
++ +++ DLET + T + + L N + ST ++ KY ++
Sbjct: 186 VKNVARRLKDLETTYRGNIITVSDTADLENVMLHSTKPKEYMIQYPAQCQKYSLVADVER 245
Query: 248 ALYTHLA--DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA- 304
++ A D+L + RS ++L + + + + + + + E GV+ A
Sbjct: 246 MIFNFFAVLDQLDIGVQPQRRSKGLMNLRDPHK---KSAIKALFNDFKFQMVEYGVYAAS 302
Query: 305 -------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA 351
+ AETIS A D +++K T +
Sbjct: 303 IAIVSLSVEFEVKKRQAETISLKTMYRAAISMCDQIRHILVRKLRDLVDDDDETDEKTNT 362
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL 411
I + S + ++ + ++ + +DI C++FVER TA + L+ +
Sbjct: 363 YEIIMNFSTPKV------QRFLQYLKQTFAGKQPKDICCLVFVERRYTAKCIFGLVLHFI 416
Query: 412 PRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLD 463
+ +++ G NS Q K Q +++FR G N+++ +S+LEEG+D
Sbjct: 417 QATPELRDVLVPQFMVGRNSISQDFESVLEGKFQKSAIQQFRDGEANLMICSSVLEEGID 476
Query: 464 VQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---QSRLENYLASGNK 520
VQ+CN V++ D +T ++Q++GRAR + + +++ S D+ T ++ Y + +
Sbjct: 477 VQACNYVLILDSLKTFNMYVQTKGRARSKEAVFIIF--SADANTGEVSKQIGQYRQAHSD 534
Query: 521 MRKEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPSD- 574
+ + + PL N + E F + G+I S+++ L++ YC LPSD
Sbjct: 535 ISEYLKGRVLERALPLPNEI-TEHFQDIIPPFKNEHGSILLASNALILLHRYCQSLPSDA 593
Query: 575 -GYFKP-----TPKFHINKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAA 618
G+ P PK + K G + ++ LP ++ I +K+ K +A
Sbjct: 594 FGFVVPWINLVEPKERV-KRFGKSAEYKQVVSIVLPLTSSLKDTIYSYPMDCVKSAKVSA 652
Query: 619 CLEACKKLHQIGALTDNLLPDIVVEK----------------HDAQKRGNEPYNA--EHP 660
ACK L+++G L + LP E+ D K E N +
Sbjct: 653 AFNACKLLYELGELGEKFLPITAKERVAAIADVHFEHWKKYGDDVTKTSKEKENQVRTYR 712
Query: 661 IYFPPELVNQSPQDTKITYHCYLIELKQHFN--------YD--ISARNIVLAMRTELESE 710
P E ++ P+ ++ Y Y I L+ HF YD + RN L +R +L
Sbjct: 713 TGCPEEFMDAMPRVGEVCY-AYEIFLEPHFERNDYTEHVYDNLQTPRNYALLLRNKLP-- 769
Query: 711 IKKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEIL 768
+ L +G+L V + R ++ + +V L ++F +T+FR I+ I
Sbjct: 770 -RLAEMPLFCNQGKLHVRVASEPREIVLDSDIKVELLQQFHVTIFRSIL--------RIW 820
Query: 769 DGFELRDNL--EIDYLLLP-----STGQLIDWKTV 796
F + D L E YL++P + ++IDW V
Sbjct: 821 QPFFVFDRLARENSYLVVPLAVGAAKAEVIDWPLV 855
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 191/465 (41%), Gaps = 115/465 (24%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AITT + F +E LE LGDSFLK + S L Y + +EG L+ K +++SN L
Sbjct: 1205 LAAITTSGSADVFDMERLEMLGDSFLKMSGSLYLANRYADWNEGTLTQVKSKLVSNRNLL 1264
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG-----------DNS-------GSYELND----- 1077
E +P I + F PK WI PG +N G + L D
Sbjct: 1265 YCLSETDIPTRISSSLFTPKYTWIPPGVSLPRNVLALWNNKPDVAKLVGPHNLRDLTLTD 1324
Query: 1078 ------------------------------DSLFNGRKIYVTGRKKVKSKTVADVVEALI 1107
D+ F+ + GR + K VAD +EAL+
Sbjct: 1325 EESLITGTCSESTLSTFMDGCRKNMSSHHADTDFSAELNFCIGRANIADKVVADTLEALL 1384
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVH---------------AERLVNVR 1152
G + G G L+ GI + P + + L+N
Sbjct: 1385 GVVVKNYGLTHGFRMLEYFGICKADIGKPLTQLLDLRLGGANMRTNVSTTEIDSFLINHA 1444
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I CYQ+LEF+GDA+LD+LI+ Y++ +
Sbjct: 1445 NLEQNLGYTFKDRGYLLQALTHPSYPTNRITGCYQQLEFIGDAILDFLISGYIFENNTKM 1504
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILH------------------ASHELYKRI 1254
+PG LTD+RSA VNN A V+H +H IL +H + +
Sbjct: 1505 TPGQLTDLRSALVNNTTLACICVRHKIHLFILAENALLSEAIASFVQFQETQNHRVTNHV 1564
Query: 1255 NITVDSFEKLSLG-------------------------STFGWESVTSFPKALGDIIESL 1289
I ++ + L + PKALGD++E+L
Sbjct: 1565 RILLEENDTTPLDVDGEVKSMEIDETTESEENNGVPTKGDYNMSQNVDVPKALGDVLEAL 1624
Query: 1290 AGAIFVDSGCNREVVFQSIRPLLEPMITPET--MRFHPVRELTEY 1332
A+++D + +Q I L +P I T + +P+R+L E+
Sbjct: 1625 IAAVYLDCR-DLHRTWQVIYNLFKPEIKEFTRNVPINPIRQLNEH 1668
>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
Length = 1658
Score = 216 bits (550), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 192/644 (29%), Positives = 302/644 (46%), Gaps = 63/644 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL-----LRKPSPFVAVFLVPK 77
R YQ+E E A ++NTI L+TG+GKTLIAI+L+R L + + FLV K
Sbjct: 109 REYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHIIELELGARWQGREKRITFFLVDK 168
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM-SKHEVLVMTPQILLDGLRL 136
V LV QQ + I+ + D V GD + W + E++ + EV+V T +IL L
Sbjct: 169 VALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYRCLHR 228
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY ++ + +++ DE HHA+ H YA I+ +FY L+E PRIFGMTASPI +K +
Sbjct: 229 SYLNISQVSLVVFDEAHHAKKNHVYARIIKDFY--LMEEDCQKRPRIFGMTASPIDTKDT 286
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
Y + H+LE+L++S++ T + +L + S + Y + T L ++
Sbjct: 287 CIS--YERATHELESLLHSEIATISDRDLLK--VIGSRPQEVRKSYARVLRQENTELCNQ 342
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
L + H + D E + ++ELG W A K E C+
Sbjct: 343 LRELVGNHPLFKQTFDSAE------------------FAVTELGAWCADKLWEL--CFRE 382
Query: 317 DFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL-DSGLLTEKIVCL 375
+ A LDG E + + ++ + S+ F+ + G L+ K L
Sbjct: 383 E--AVSTLDGRVEGSRARDPDEVGESSHEVSNAREALSLVQQWSFSPPEDGSLSTKTHKL 440
Query: 376 IESLLE----YRGVEDIRCIIFVERVITAIVLQSLL--SELLPRHCTWKTKYI--AGNNS 427
IE L E I+CI+FV+R TA++L +L +E+ + K ++ AG
Sbjct: 441 IEILAECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFLIGAGRGG 500
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
+ ++Q + V FR G +N + ATSI EEGLD+ CN+VI FD T +IQSRG
Sbjct: 501 NAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQSRG 560
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH 547
RARM+NS ++ M + G+ R + KMR L SLP + +D
Sbjct: 561 RARMRNSWFIHMTEFGNPEHNRRWFQDRVNEQKMRDFCL---SLPKDRIMEKAEVDDVLR 617
Query: 548 VEST-------GTIATLSSSVSLIYF--YCSRLPSDGYFKPTPKFHINKEMG--ICTLYL 596
+ + G+ A+L+ SL+ + + LP+ + + + G +YL
Sbjct: 618 GDQSQKIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILSVDYTVVPVFGGFQGEVYL 677
Query: 597 PNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTDNL 636
P + P+++ A G + KQ AA C +L+ L D+L
Sbjct: 678 PASSPLRS--AMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 204/473 (43%), Gaps = 94/473 (19%)
Query: 925 PELCRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIP 977
P+ C +++ + +S ++TF P+I++RL++ L+++ +N+ LD IP
Sbjct: 998 PQTCYLVLETLLISQIPVDTVVMAYTF-PAIIYRLENSLISLEACQNLGLD-------IP 1049
Query: 978 TIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNH 1023
L A+T D H E LE LGD FLK A S L+ + +
Sbjct: 1050 IDIALIAMTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEGD- 1108
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG 1083
E V++ I N L E L IR++SF+ + W PG L G
Sbjct: 1109 EFEYHVERMLDICNKNLLNWALESNLQEHIRSKSFNRRTWYPPGLK----------LLKG 1158
Query: 1084 RKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV------------ 1130
+K V + K++ADV EALIGA +L+ ++ L + V
Sbjct: 1159 KKTEVDDEHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVTVMTHSKTHTMQAW 1218
Query: 1131 -DFV----------NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 1177
D+ P Q Q ++ ++ +++ + Y F++P LL A H SY
Sbjct: 1219 SDYYASYQCPEWLSTPPSQTQLELCSQ-------IKNKMGYRFKNPRLLRCAFMHPSYPR 1271
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
IP YQRLEFLGD++LD + YL+ K+P P +LT+ + A V+N + +V
Sbjct: 1272 QYENIP-SYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGL 1330
Query: 1238 GLHKHILHASHELYKRIN-----ITVDSFEKLSLGSTFG----------WESVTSFPKAL 1282
G H+H++H L I +T E L G W V PK L
Sbjct: 1331 GFHRHLIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCL 1390
Query: 1283 GDIIESLAGAIFVDSGCNREVVF----QSIRPLLEPM-ITPETMRFHPVRELT 1330
DI+E+ GA+FVD+G + V + I+P M I HPV +T
Sbjct: 1391 PDILEAYVGALFVDTGYDYSAVVGFFDRHIKPYFADMSIYDMYSSKHPVTHIT 1443
>gi|80979107|gb|ABB54756.1| Dicer-2 [Drosophila simulans]
Length = 1567
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 253/1043 (24%), Positives = 444/1043 (42%), Gaps = 142/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD- 574
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 575 -GYFKP----------TPKFHIN-KEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
G+ P F +N K+ + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGVNAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDA-------------------QKRGNEPYNAEHP 660
+AC L+ +G L++ LP + E+ A +G + +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWHNYGDSVTATVNKGEKSKPRTYK 701
Query: 661 IYFPPELVNQSPQDTKITY--------HCYLIELKQHFNYDI-SARNIVLAMRTELESEI 711
+ P E + P+ ++ Y L E +H ++ + RN + +R +L
Sbjct: 702 THCPLEFYDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNLQTPRNYAILLRNKLP--- 758
Query: 712 KKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILD 769
+ L +G L V + I N Q+ L +F +FR I+ + + +LD
Sbjct: 759 RLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQFHGMVFRDIL--KIWQPCFVLD 816
Query: 770 GFELRDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
R + E YL++P + IDW+ + T G ++ A
Sbjct: 817 ----RRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSSVQQREQQPAPRPED 871
Query: 825 KSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQ 884
G + T N N + +T V L S F NN TY +YG +
Sbjct: 872 FEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMSKYGNR 923
Query: 885 L---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ + L+ R + N+ + R + K + +++ L PELC + P L +
Sbjct: 924 IGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPGDL--W 981
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A +L+
Sbjct: 982 IKLIFLPSILNRMYFLLHAESLR 1004
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 150/347 (43%), Gaps = 69/347 (19%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLALDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
+PG LTD+RSA VNN A V+H LH IL + +L + I+ V+
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536
>gi|80979105|gb|ABB54755.1| Dicer-2 [Drosophila simulans]
gi|80979109|gb|ABB54757.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 252/1043 (24%), Positives = 443/1043 (42%), Gaps = 142/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDA-------------------QKRGNEPYNAEHP 660
+AC L+ +G L++ LP + E+ A +G + +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWHNYGDSVTATVNKGEKSKPRTYK 701
Query: 661 IYFPPELVNQSPQDTKITY--------HCYLIELKQHFNYDI-SARNIVLAMRTELESEI 711
+ P E + P+ ++ Y L E +H ++ + RN + +R +L
Sbjct: 702 THCPLEFYDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNLQTPRNYAILLRNKLP--- 758
Query: 712 KKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILD 769
+ L +G L V + I N Q+ L +F +FR I+ + + +LD
Sbjct: 759 RLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQFHGMVFRDIL--KIWQPCFVLD 816
Query: 770 GFELRDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
R + E YL++P + IDW+ + T G ++ A
Sbjct: 817 ----RRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSSVQQREQQPAPRPED 871
Query: 825 KSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQ 884
G + T N N + +T V L S F NN TY +YG +
Sbjct: 872 FEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMSKYGNR 923
Query: 885 L---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ + L+ R + N+ + R + K + +++ L PELC + P L +
Sbjct: 924 IGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPGDL--W 981
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A +L+
Sbjct: 982 IKLIFLPSILNRMYFLLHAESLR 1004
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 189/468 (40%), Gaps = 119/468 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLALDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN----------------- 1255
+PG LTD+RSA VNN A V+H LH IL + +L + I+
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNYV 1549
Query: 1256 ----------------------------ITVDSFEKLSLGSTFGWESVTSFPKALGDIIE 1287
I+ ++ + + F + PK LGD++E
Sbjct: 1550 HILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLE 1609
Query: 1288 SLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
+L AI++D R EV+F+ P L+ M +P+R+L E+
Sbjct: 1610 ALIAAIYLDCRDLQRTWEVIFRLFEPELQEFT--RNMPINPIRQLIEH 1655
>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
Length = 1591
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 306/646 (47%), Gaps = 67/646 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL-----LRKPSPFVAVFLVPK 77
R YQ+E E A ++NTI L+TG+GKTLIAI+L+R L + + FLV K
Sbjct: 109 REYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHIIELELGARWQGREKRITFFLVDK 168
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM-SKHEVLVMTPQILLDGLRL 136
V LV QQ + I+ + D V GD + W + E++ + EV+V T +IL L
Sbjct: 169 VALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYRCLHR 228
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY ++ + +++ DE HHA+ H YA I+ +FY L+E PRIFGMTASPI +K +
Sbjct: 229 SYLNISQVSLVVFDEAHHAKKNHVYARIIKDFY--LMEEDCQKRPRIFGMTASPIDTKDT 286
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
Y + H+LE+L++S++ T + +L + S + Y + T L ++
Sbjct: 287 CIS--YERATHELESLLHSEIATISDRDLLK--VIGSRPQEVRKSYARVLRQENTELCNQ 342
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
L + H + D E + ++ELG W A K E C+
Sbjct: 343 LRELVGNHPLFKQTFDSAE------------------FAVTELGAWCADKLWEL--CFRE 382
Query: 317 DFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL---DSGLLTEKIV 373
+ A LDG E + + ++ ++ S A ++ +++ + G L+ K
Sbjct: 383 E--AVSTLDGRVEGSRARDPDEVGES--SHEVSNAREALSLVQQWSFSPPEDGSLSTKTH 438
Query: 374 CLIESLLE----YRGVEDIRCIIFVERVITAIVLQSLL--SELLPRHCTWKTKYI--AGN 425
LIE L E I+CI+FV+R TA++L +L +E+ + K ++ AG
Sbjct: 439 KLIEILAECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFLIGAGR 498
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
+ ++Q + V FR G +N + ATSI EEGLD+ CN+VI FD T +IQS
Sbjct: 499 GGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQS 558
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF 545
RGRARM+NS ++ M + G+ R + KMR L SLP + +D
Sbjct: 559 RGRARMRNSWFIHMTEFGNPEHNRRWFQDRVNEQKMRDFCL---SLPKDRIMEKAEVDDV 615
Query: 546 YHVEST-------GTIATLSSSVSLIYF--YCSRLPSDGYFKPTPKFHINKEMG--ICTL 594
+ + G+ A+L+ SL+ + + LP+ + + + G +
Sbjct: 616 LRGDQSQKIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILSVDYTVVPVFGGFQGEV 675
Query: 595 YLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTDNL 636
YLP + P+++ A G + KQ AA C +L+ L D+L
Sbjct: 676 YLPASSPLRS--AMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 204/473 (43%), Gaps = 94/473 (19%)
Query: 925 PELCRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIP 977
P+ C +++ + +S ++TF P+I++RL++ L+++ +N+ LD IP
Sbjct: 998 PQTCYLVLETLLISQIPVDTVVMAYTF-PAIIYRLENSLISLEACQNLGLD-------IP 1049
Query: 978 TIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNH 1023
L A+T D H E LE LGD FLK A S L+ + +
Sbjct: 1050 IDIALIAMTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEGD- 1108
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG 1083
E V++ I N L E L IR++SF+ + W PG L G
Sbjct: 1109 EFEYHVERMLDICNKNLLNWALESNLQEHIRSKSFNRRTWYPPGLK----------LLKG 1158
Query: 1084 RKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV------------ 1130
+K V + K++ADV EALIGA +L+ ++ L + V
Sbjct: 1159 KKTEVDDEHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVTVMTHSKTHTMQAW 1218
Query: 1131 -DFV----------NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY-- 1177
D+ P Q Q ++ ++ +++ + Y F++P LL A H SY
Sbjct: 1219 SDYYASYQCPEWLSTPPSQTQLELCSQ-------IKNKMGYRFKNPRLLRCAFMHPSYPR 1271
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
IP YQRLEFLGD++LD + YL+ K+P P +LT+ + A V+N + +V
Sbjct: 1272 QYENIP-SYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGL 1330
Query: 1238 GLHKHILHASHELYKRIN-----ITVDSFEKLSLGSTFG----------WESVTSFPKAL 1282
G H+H++H L I +T E L G W V PK L
Sbjct: 1331 GFHRHLIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCL 1390
Query: 1283 GDIIESLAGAIFVDSGCNREVVF----QSIRPLLEPM-ITPETMRFHPVRELT 1330
DI+E+ GA+FVD+G + V + I+P M I HPV +T
Sbjct: 1391 PDILEAYVGALFVDTGYDYSAVVGFFDRHIKPYFADMSIYDMYSSKHPVTHIT 1443
>gi|255646653|gb|ACU23800.1| unknown [Glycine max]
Length = 273
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/266 (43%), Positives = 167/266 (62%), Gaps = 21/266 (7%)
Query: 653 EPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEI- 711
E + +P Y P E V+ S + +TYHCYL+EL+QH+ Y +S +IVLA+R+EL+SEI
Sbjct: 2 EGFGNAYPSYVPSERVSCSSKGRNVTYHCYLMELEQHYEYQVSVNDIVLAIRSELDSEIV 61
Query: 712 ---KKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEIL 768
+FD V+RG+L VNL+HL IQL P +V CRRFQ TLFR++++ ++ KL +
Sbjct: 62 DTLSGTSFD--VKRGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVS 119
Query: 769 DGFELRDNLEIDYLLLPST-------GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARI 821
D F L DN EID+LLLP+T +IDWK V +V F ++ C +A
Sbjct: 120 DDFSLGDNPEIDFLLLPATVKHQRPSNSIIDWKPVLSVPFSSES------TCDCKDHACN 173
Query: 822 VHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLG--HLNANSLFTRNNGSVTTYKKHYEE 879
V ++ +C+CK+ N +V TPHNG IY I G LN NS + +TTYK+H+++
Sbjct: 174 VRIRNDSVCSCKLENCVVYTPHNGSIYIIYTTDGTKKLNGNSTLNQGLKGITTYKEHFKK 233
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYL 905
R+GI+L F+ + LL+GR +F V+NYL
Sbjct: 234 RHGIELGFEHQSLLHGRNLFKVENYL 259
>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1533
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 188/651 (28%), Positives = 310/651 (47%), Gaps = 99/651 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE E A ++N I L+TGSGKTLIA++LL+ +++ K A+ P++
Sbjct: 110 REYQLELFERAKQENVIAVLDTGSGKTLIAVLLLK---HVIEKELEDRALGKTPRISFF- 165
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
LKV ++ G M D W TW + ++ V+V T ++L L S+ +
Sbjct: 166 -----------LKVERFCGAMQCDLWSKQTWAKHFIQNMVIVCTAEVLAQCLMHSFINME 214
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +L+ DE HHA+ H YA I++++Y + T DS P++FGMTASP+ +KV D
Sbjct: 215 QINLLVFDEAHHAKKGHSYAKIISDYY---IPTEDSKRPKVFGMTASPVDAKV-----DV 266
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADELAMI 260
Q DLE + ++ T A+ +L I + Y + P LY + D
Sbjct: 267 VQAASDLEKFLQCRIATTANPDLLRKTISRPHEEVVEYAPLQTPFETTLYKEMRD----- 321
Query: 261 ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW---------LALKAAETI 311
+ + R+ L + +A SELG W L + A+ +
Sbjct: 322 KFRDVRAFHALFQSSKEA-----------------TSELGPWCSDMYWFFALQEEEAKNL 364
Query: 312 SCYESDFFAWEQ----LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGL 367
E F ++ + E + K +AS+ +V P G + + L
Sbjct: 365 ESREEQAFHRDKKRKPISSLDEEMAKL--REASK-IVQNHPFG-------EPRPTL--TY 412
Query: 368 LTEKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
L+ K++ L LL Y + RCI+FV+R TA +L + + + + K+ I GN+
Sbjct: 413 LSSKVLELHTWLLRYFERQTNSRCIVFVQRRHTARILHQVFASIGGPYL--KSGMIIGNS 470
Query: 427 ---SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
SG+ R++ ++ F++G +N + ATS+ EEGLD+ +CN+VI FD +T+ ++
Sbjct: 471 SRASGLNISFREQVMTLL-RFKKGELNCLFATSVAEEGLDIPNCNIVIRFDLYKTMIQYV 529
Query: 484 QSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLP--------CS 534
QSRGRAR +NS YL MV+ G+ S Q+ LE A ++ +E SLP +
Sbjct: 530 QSRGRARHKNSRYLHMVEEGNISHRQTVLEARQA--ERLMREFCE--SLPENRLLKGHGA 585
Query: 535 PLNNHMYGEDFYHV---ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG- 590
L++ + +F+ ST T +S+ ++ + + LP G P + ++ E G
Sbjct: 586 DLDDLTFEREFFRTYTEPSTRAKLTYDNSLVILAHFTAALPCKGDVSSDPLYIMSSERGE 645
Query: 591 -ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+C + LP N P+ + + + K++A E C +L + L +NLLP
Sbjct: 646 FLCEVILPENSPVPSARGRPASSKAVAKRSAAFELCIRLREKDYLDENLLP 696
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 224/479 (46%), Gaps = 70/479 (14%)
Query: 867 NGSVTTYKKHYEERYGIQLCFDR-EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPP 925
N S++ YK E++ L ++R +P++ R++ H +N L++ +Q+ SK+ L P
Sbjct: 924 NYSISLYKGSREKQ---DLNWNRGQPVVEARQVQHRRNMLAEPERQEGDFRSKVY--LCP 978
Query: 926 ELCRI-IMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
E +I + P ++++ Y +P+++HR + L+A+ +L + I LEA
Sbjct: 979 EPLKISALRPAAVASIY---VLPAVIHRTEQYLIALEACQLL------GLDIAPDLALEA 1029
Query: 985 IT-----TKKCQEDF---------HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVK 1030
+T T+K E+ + E LE +GD FLK S LF +++E VK
Sbjct: 1030 VTKDSDNTEKHNEEAQNFRRGMGNNYERLEFMGDCFLKMGTSIALFSQNPDDNEFDFHVK 1089
Query: 1031 KERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKI 1086
+ +I N L +L ++R+ +F + W G + G + D+ +
Sbjct: 1090 RMCLICNQNLFDTAKRIELTKYVRSMAFSRRTWYPEGLKMLEGKGHKKTGDEVM------ 1143
Query: 1087 YVTGRKKVKSKTVADVVEALIGA-FLS--TGGENVGLIFLDRIGIKVDFVNV-------- 1135
+ + KTVADV EALIGA +L+ T G+ + + + + V+
Sbjct: 1144 ----KHSLSDKTVADVCEALIGAAYLTHNTPGKWLPENWDNAVRAVAALVSSENHAMASW 1199
Query: 1136 ---------PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML--PEIPR 1184
P + A ++ V+ E Y FR LL A H SY ++P
Sbjct: 1200 SEYFSAYKKPSYLDAEATAAQIDLVKQAEKEHPYRFRSAKLLRSAFMHPSYPFNYEKVP- 1258
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
YQRLEFLGD+++D +L K+P P +LT+ + A V+N VK G HKH+
Sbjct: 1259 SYQRLEFLGDSLIDTACITWLIYKFPDKDPQWLTEHKMAMVSNKFLGAVCVKLGFHKHLK 1318
Query: 1245 HASHELYKRINITVDSF---EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN 1300
++ ++ +I V E+ S G+ W +V S PK L DI+E+ GA+FVDS N
Sbjct: 1319 YSYSQMEYQIRDYVTELREAERESKGARDYWTTVKSPPKCLPDIVEAYVGALFVDSEYN 1377
>gi|80979101|gb|ABB54753.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 252/1043 (24%), Positives = 443/1043 (42%), Gaps = 142/1043 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDA-------------------QKRGNEPYNAEHP 660
+AC L+ +G L++ LP + E+ A +G + +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIADVHFEHWHNYGDSVTATVNKGEKSKPRTYK 701
Query: 661 IYFPPELVNQSPQDTKITY--------HCYLIELKQHFNYDI-SARNIVLAMRTELESEI 711
+ P E + P+ ++ Y L E +H ++ + RN + +R +L
Sbjct: 702 THCPLEFYDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNLQTPRNYAILLRNKLP--- 758
Query: 712 KKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHNLDKLNEILD 769
+ L +G L V + I N Q+ L +F +FR I+ + + +LD
Sbjct: 759 RLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQFHGMVFRDIL--KIWQPCFVLD 816
Query: 770 GFELRDNLEIDYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
R + E YL++P + IDW+ + T G ++ A
Sbjct: 817 ----RRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSSVQQREQQPAPRPED 871
Query: 825 KSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQ 884
G + T N N + +T V L S F NN TY +YG +
Sbjct: 872 FEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMSKYGNR 923
Query: 885 L---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPISLSTF 940
+ + L+ R + N+ + R + K + +++ L PELC + P L +
Sbjct: 924 IGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPGDL--W 981
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI++R+ LL A +L+
Sbjct: 982 IKLIFLPSILNRMYFLLHAESLR 1004
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 188/468 (40%), Gaps = 119/468 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLCATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLALDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN----------------- 1255
+PG LTD+RSA VNN A V+H LH IL + +L + I+
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNYV 1549
Query: 1256 ----------------------------ITVDSFEKLSLGSTFGWESVTSFPKALGDIIE 1287
I+ ++ + + F + PK LGD++E
Sbjct: 1550 HILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLE 1609
Query: 1288 SLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
+L AI++D R EV+F+ P L+ M +P+R+L E+
Sbjct: 1610 ALIAAIYLDCRDLQRTWEVIFRLFEPELQEFT--RNMPINPIRQLIEH 1655
>gi|410962933|ref|XP_003988023.1| PREDICTED: endoribonuclease Dicer [Felis catus]
Length = 1893
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 207/712 (29%), Positives = 315/712 (44%), Gaps = 116/712 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 35 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNG 94
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V Q A++ H+DLKVG+Y W W +E +KH+VLVMT
Sbjct: 95 KRTVFLVNSANQVAPQVSAVRTHSDLKVGEYSSLEVNAAWTKEKWNQEFTKHQVLVMTCY 154
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+TA
Sbjct: 155 VALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLTA 208
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
S + K E + +KI LE ++ S T VL + T++ D P
Sbjct: 209 SILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGPFT 262
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSELGVWLALKA 307
+ L L + + + + +++ E +SK I S L LG W A K
Sbjct: 263 DRSGLYGRLLLELEEALNFINDCNISVRSKERDSTSISKQILSDCRAVLVVLGPWCADKV 322
Query: 308 AETISCYESDFFAWEQLD------GFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
A + + EQ + F +T ++K + + S
Sbjct: 323 AGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF---------------SPA 367
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVE----------------------------------- 386
+LD +T K++ L+E L +Y+ E
Sbjct: 368 SLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEE 427
Query: 387 -------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGI 429
+I C IIFVER TA+VL L+ E P + +I G+ G
Sbjct: 428 KEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG- 486
Query: 430 QCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
+ Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S
Sbjct: 487 KNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRS 546
Query: 482 FIQSRGRARMQNSDYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
++QS+GRAR S+Y+++ + D T +E L NK K V + +
Sbjct: 547 YVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDAGETDVEP 604
Query: 535 PLNNHMYGEDFY-HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--- 590
+++ + + G T+++++ I YC+RLPSD + PK +E+
Sbjct: 605 VVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELPDGT 663
Query: 591 -ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TLYLP N P++ I I+ ++ L C+KLH+IG L D+L+P
Sbjct: 664 FYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP 715
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 145/354 (40%), Gaps = 74/354 (20%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F
Sbjct: 1556 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPARENFNSQ 1615
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLIT- 1202
+ L R S+ S +++ L +G +P PRC + + D L++LI+
Sbjct: 1616 QKALSGSRAAASVAGPR----SSVLKDLEYGCLKIP--PRCMFDHPD--ADKTLNHLISG 1667
Query: 1203 -------------------------VYLYNKYPGLSPGYLT---DMRSASVNNDCYALSS 1234
Y YN G G+L R A V + ++
Sbjct: 1668 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITGREGGFLAYWLASRVAVVTQEWRGRAA 1727
Query: 1235 ---VKHGLHKHILHASHELYKRINITVDSFEKLSLGS--------TFGWESVTSFPKALG 1283
++ G A L +S+ LG E PKA+G
Sbjct: 1728 EYTLRSGARARGARAKSTL-------CESYTGAELGEHGLRRSEEDEEKEEDIEVPKAMG 1780
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFSM 1340
DI ESLAGAI++DSG + E+V+Q P++ P+I + PVREL E + FS
Sbjct: 1781 DIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS- 1839
Query: 1341 KKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
P GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1840 --PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1888
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1392
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1295 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1347
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1348 MRSKKVSN 1355
>gi|5019620|dbj|BAA78691.1| helicase-MOI [Homo sapiens]
Length = 1924
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 320/717 (44%), Gaps = 124/717 (17%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIA-IMLLRSYAYL-LRKPSPF 69
+E D + R YQ+E LE AL NTIV L TGSGKT IA LL+S YL L + S
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIASTTLLKSCLYLDLGETSAR 93
Query: 70 VA---VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
VFLV V QQ A++ H+DLKVG+Y W W +E +KH+VL+MT
Sbjct: 94 NGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMT 153
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
+ L+ L+ Y L+ I +L+ DECH A H Y M +L E S PRI G+
Sbjct: 154 CYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREFM-----KLCEICPS-CPRILGL 207
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TAS + K +D +K LE ++ S T VL + T++ D P
Sbjct: 208 TASILNGKWDP--EDLEEKFQKLEKILKSNAETATDLVVLDRY----TSQPCEIVVDCGP 261
Query: 247 HALYTHLADELAMIELKHTRSLENLDLN------EAQAELIRKKVSKINSTLLYCLSELG 300
+ L + L M EL+ + N D N E + LI K+ I S L LG
Sbjct: 262 FTDRSGLYERLLM-ELEEALNFIN-DCNISVHSKERDSTLISKQ---ILSDCRAVLVVLG 316
Query: 301 VWLALKAAETISCYESDFFAWEQLDG------FGETIIKKFGSDASQALVTYVPSGAEWS 354
W A K A + + EQ + F +T ++K + +
Sbjct: 317 PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF----------- 365
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE---------------------------- 386
S +LD +T K++ L+E L +Y+ E
Sbjct: 366 ----SPASLDLKFVTPKVIKLLEILRKYKPYERHSFESVEWYNNRNQDNYVSWSDSEDDD 421
Query: 387 --------------------DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYI 422
+I C IIFVER TA+VL L+ E P + +I
Sbjct: 422 EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI 481
Query: 423 AGNNSGIQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
G+ G + Q R +KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD
Sbjct: 482 TGHGIG-KNQPRNNTMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFD 540
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEV---LSHAS 530
S++QS+GRAR S+Y+++ + + + L+ Y A +R + +
Sbjct: 541 LPTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE 600
Query: 531 LPCSPL--NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE 588
P+ ++H++ + G T+++++ I YC+RLPSD + PK +E
Sbjct: 601 TDIDPVMDDDHVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRE 659
Query: 589 MG----ICTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ TLYLP N P++ I ++ ++ L C+KLH+IG L D+L+P
Sbjct: 660 LPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP 716
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1670 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1729
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1730 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1785
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 1786 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 1845
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1846 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1899
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1900 RIAKSAAARRALRSLKANQP 1919
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1392
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 1285 IGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 1337
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 1338 PDAHEGRLSYMRSKKVSN 1355
>gi|80979115|gb|ABB54760.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 215 bits (547), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 260/1045 (24%), Positives = 444/1045 (42%), Gaps = 146/1045 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 177 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 229
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 230 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 287
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 288 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 347
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 348 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 401
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 402 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 461
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 462 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 521
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 522 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 620 LEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPEL---VNQSPQDTK 676
+AC L+ +G L++ LP + E+ A + EH + + VN+S +
Sbjct: 642 FKACLALYSLGELSEKFLPKTLKERVAAIAD----VHFEHWHNYGDSVTATVNKSEKSKP 697
Query: 677 ITY--HCYLIELKQHFNYDISAR--NIVLAMRTELESEIKKVNF------DLEVERGR-- 724
TY HC L F YD R + A LE + K + +L+ R
Sbjct: 698 RTYKTHCPL-----EF-YDARPRVGELCYAYEIFLEPQFKLCEYTEHMYLNLQTPRNYAI 751
Query: 725 -LTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHN--LDKLNEILDGFELRDNLEI-- 779
L L L + L NQ +L R V + ++ L+ L++ G RD L+I
Sbjct: 752 LLRNKLPRLAEMPLFSNQGMLHVRVADAPLEVTIQNSEQLELLHQ-FHGMVFRDILKIWQ 810
Query: 780 ------------DYLLLP-----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIV 822
YL++P + IDW+ + T G ++ A
Sbjct: 811 PCFVLDRRSKENSYLVVPLILDADQQKCIDWQ-LMTKFQKLAQGQGSSVQQREQQPAPRP 869
Query: 823 HTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYG 882
G + T N N + +T V L S F NN TY +YG
Sbjct: 870 EDFEGKIVTQWYTN-------NDKRMLVTKVHRELTPLS-FMENNQQEKTYYDFTMSKYG 921
Query: 883 IQL---CFDREPLLNGRRIFHVQNYLSKCR-QQKQKEPSKISFELPPELCRIIMAPISLS 938
++ + L+ R + N+ + R + K + +++ L PELC + P L
Sbjct: 922 NRIGDVVHKDKFLIEVRDLTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFPGDL- 980
Query: 939 TFYSFTFVPSIMHRLQSLLLAVNLK 963
+ F+PSI++R+ LL A +L+
Sbjct: 981 -WIKLIFLPSILNRMYFLLHAESLR 1004
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 189/468 (40%), Gaps = 119/468 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1190 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1249
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1250 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFANMIGPHNLRDLALDD 1309
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1310 EESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIANKVIADTLEALL 1369
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I ++ P + L+N
Sbjct: 1370 GVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHS 1429
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1430 HLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1489
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV-------------- 1258
+PG LTD+RSA VNN A V+H LH IL + +L + I+ V
Sbjct: 1490 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNYV 1549
Query: 1259 --------------DSFEKLSL-----------------GSTFGWESVTSFPKALGDIIE 1287
D ++L L F + PK LGD++E
Sbjct: 1550 HILLEEADVQPTPLDLDDELELPHANKCISQKAEQGVPPKGEFNISTNVDVPKTLGDVLE 1609
Query: 1288 SLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
+L AI++D R EV+F+ P L+ M +P+R+L E+
Sbjct: 1610 ALIAAIYLDCRDLQRTWEVIFRLFEPELQEFT--RNMPINPIRQLIEH 1655
>gi|334283448|gb|AAR82738.2| SD11113p [Drosophila melanogaster]
Length = 1701
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 244/1029 (23%), Positives = 429/1029 (41%), Gaps = 144/1029 (13%)
Query: 37 NTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVVLVPQQAEAIKMHTD 93
N IV+L TGSGKT +AI++L+ ++ KP A+F+ V L QQA A++ T+
Sbjct: 2 NGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTN 61
Query: 94 LKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECH 153
KVG Y G+ GVD W W +E+ K++VLV T Q+ LD + +Y L+ + V+I+DECH
Sbjct: 62 FKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYVALSSLSVVIIDECH 121
Query: 154 HARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLM 213
H G H + EF + LPR+ G+T IK + + K+ +LE
Sbjct: 122 HGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---NVATKLKELEITY 174
Query: 214 NSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDL 273
+ T + + N + ++T + PH L E++ + +LDL
Sbjct: 175 RGNIITVSDTKEMENVMLYATKPTEVMV--SFPHQEQVLTVTRLISAEIE--KFYVSLDL 230
Query: 274 NEAQAELIRKK--------------VSKINSTLLYCLSELGVWLA------LKAAETISC 313
+ IR+ V ++ + LY + E G++ A L I
Sbjct: 231 MNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVEFDIKR 290
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIV 373
+++ + + + T+ +K Q L + ++ + S ++ +
Sbjct: 291 RQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRFL 350
Query: 374 CLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-----RHCTWKTKYIAGNNSG 428
++ + +DI C++FVER T + LL + R+ + NN
Sbjct: 351 MSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNIS 410
Query: 429 IQCQS---RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
+S RK Q +++FR G N+++ +S+LEEG+DVQ+CN V + DP +T ++QS
Sbjct: 411 PDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 470
Query: 486 RGRARMQNSDYLLMV--KSGDSTTQSRLENYLASGNK----MRKEVLSHASLPCSPLNNH 539
+GRAR + ++L K + T Q ++ Y + N ++ VL + H
Sbjct: 471 KGRARTTEAKFVLFTADKEREKTIQ-QIYQYRKAHNDIAEYLKDRVLEKTEPELYEIKGH 529
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE----------- 588
+ G + ++++++++ YC +P+D + P FH+ +E
Sbjct: 530 FQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIFGVSA 589
Query: 589 --MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVE 643
+ ++ +P NC ++ I N+KT K +A +ACK L+ +G L + +P + E
Sbjct: 590 KGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVPKTLKE 649
Query: 644 K-----------------------HDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
+ + A K + Y E P+ E + P+ +I Y
Sbjct: 650 RVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPL----EFYDALPRVGEICYA 705
Query: 681 CYLI--------ELKQHFNYDI-SARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKH 731
+ E +H ++ + RN + +R +L + L +G+L V + +
Sbjct: 706 YEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLP---RLAEMPLFSNQGKLHVRVAN 762
Query: 732 LGRIQLIPN--QVLLCRRFQITLFRVIMD--HNLDKLNEILDGFELRDNLEIDYLLLP-- 785
+I N Q+ L +F +FR I+ H L+ R + E YL++P
Sbjct: 763 APLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLD--------RRSKENSYLVVPLI 814
Query: 786 ---STGQLIDWKTVATV-LFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCT 841
+ DW+ + P+ +GS N+ A G + T N
Sbjct: 815 LGAGEQKCFDWELMTNFRRLPQSHGS--NVQQREQQPAPRPEDFEGKIVTQWYANY---- 868
Query: 842 PHNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQLCFDREPL----LN 894
+ +T V L S +N T Y+ Y R G + D+ + L
Sbjct: 869 ---DKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDVVHKDKFMIEVRDLT 925
Query: 895 GRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQ 954
+ F+V N + K +K+ L PELC P L + F+PSI++R+
Sbjct: 926 EQLTFYVHNR----GKFNAKSKAKMKVILIPELCFNFNFPGDL--WLKLIFLPSILNRMY 979
Query: 955 SLLLAVNLK 963
LL A L+
Sbjct: 980 FLLHAEALR 988
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 216/534 (40%), Gaps = 137/534 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1174 LAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLL 1233
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P + T F P+ W+ PG +N G + L D +L
Sbjct: 1234 FCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALGD 1293
Query: 1081 ----------------------FNGRKIYV-----------TGRKKVKSKTVADVVEALI 1107
NG+ Y G + +K +AD +EAL+
Sbjct: 1294 EESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1353
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G L+ I ++ P + ++ ++ L+N
Sbjct: 1354 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHY 1413
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+LE L Y+F+D L++ALTH SY I YQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1414 YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKM 1473
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--------------------YK 1252
+PG LTD+RSA VNN A V+H LH IL + +L Y
Sbjct: 1474 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1533
Query: 1253 RI----------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
RI I+ ++ + + F + PKALGD
Sbjct: 1534 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGD 1593
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMK 1341
++E+L A+++D R EV+F P L+ E R P+ + + + H
Sbjct: 1594 VLEALIAAVYLDCRDLQRTWEVIFNLFEPELQ-----EFTRKVPINHIRQLVEHKH---A 1645
Query: 1342 KPVASR--ISGKAAVTVEVQANGRLFEHTF----LDADKKTAKKVACKEVLKSL 1389
KPV S + G+ TV V E T ++K AK A K L+ L
Sbjct: 1646 KPVFSSPIVEGE---TVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1696
>gi|213408108|ref|XP_002174825.1| dicer [Schizosaccharomyces japonicus yFS275]
gi|212002872|gb|EEB08532.1| dicer [Schizosaccharomyces japonicus yFS275]
Length = 1384
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 189/636 (29%), Positives = 304/636 (47%), Gaps = 77/636 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-------KPSPFVAVFLV 75
RNYQ A A+KQNT++ + TG+GKTL+AI L+ Y+L K S +++FLV
Sbjct: 21 RNYQEVAYNIAIKQNTLLVMNTGAGKTLLAIKLIE---YVLEQENSTCEKTSKRISIFLV 77
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
PKV LV QQA+ ++ + VG++ G++ + + + E+ K++V+V+T +L + L
Sbjct: 78 PKVPLVEQQADYVQTQLNRPVGRFCGEIS-NLYHDNVFAEKFMKNDVVVVTGGLLFECLS 136
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHR-LLETGDSNLPRIFGMTASPIKSK 194
+ KL+ + +LI DECHHA Y IM FYH L E ++ +PR+FGMTASP+
Sbjct: 137 KGFIKLSDVNLLIFDECHHASKDDVYVRIMKYFYHEPLREHPETIMPRVFGMTASPLMGN 196
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
+ E+++ + LE + +SK+ E + + K +Y + + ++
Sbjct: 197 KWALEKEF----NKLEDIYDSKLCIITDEDLGKE---LRSPKTFILQYSIEDFSTQSKVS 249
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
D + EN D ++ +I + ++ ELG+W Y
Sbjct: 250 DRFWKLT-------ENFD-----------RLKQIITRVVTETVELGLWFG--------DY 283
Query: 315 ESDFFAWEQLDGFGETIIKKFGSD-------ASQALVTYVPSGAEWSIGDD-SKFNLDSG 366
FF L + ++ G++ A +AL V + K L+
Sbjct: 284 SWQFFLRHALKKYDARRLR--GAEVPKEEVLAFEALQEEVRKANLLTTSKQLRKPKLNGI 341
Query: 367 LLTEKIVCLIESLLEYRGVEDI-RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
+T K++ L + L R IIFVER +TA +L+ ++ + + + GN
Sbjct: 342 DVTNKVIILYKFLRNLFATNSTARVIIFVERKVTAFLLKLFFDKI--DFEGIRVESLVGN 399
Query: 426 NS---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
S G + S K Q E++ F+ G NV+VAT+I EEGLD+ SC++V F +T
Sbjct: 400 GSNQAGDEQMSYKLQKEVIRRFKHGSANVLVATAIAEEGLDIPSCDVVFRFSLCKTAIQL 459
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP---LNNH 539
IQS+GRAR S ++ ++ S + L + L + + KE L SP +N+
Sbjct: 460 IQSKGRARANTSIFVNLL----SEDEKELFSELCTKEIILKETLYAYCCTRSPKVEFDNN 515
Query: 540 M---YGED--FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--IC 592
+ + +D Y +E TG + T +VSL+Y C R+PSD Y P+F I E C
Sbjct: 516 ITDFFNDDNELYKIEETGALLTPFIAVSLLYGLCQRIPSDPYTLYLPEFKIQNEGEHFTC 575
Query: 593 TLYLPNNCPIQTVIAQG--NIKTLKQAACLEACKKL 626
L LP I I N K K+ A ++AC +L
Sbjct: 576 ELRLPAILKIPPYITPPCRNKKKAKRYAAVKACLQL 611
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 198/411 (48%), Gaps = 41/411 (9%)
Query: 926 ELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAI 985
E+ ++++ P S +PS+++ + + L L+ L I T +LEA
Sbjct: 886 EVTKLLIMPFPYEIRNSALLLPSLLYMFEQVHLVDALRVRL------QAKISTKSLLEAS 939
Query: 986 TTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGC 1045
T+ F + E GD+FLK AAS +F +Y E L ++++RII N+ L +
Sbjct: 940 TSPGSVLPFDYDRYEFYGDTFLKLAASNSVFLSYLWVPECKLHIERKRIIRNSTLFTISK 999
Query: 1046 EQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEA 1105
+ LPGF+ +E F K +I G Y+ S K + + + +KTVAD+VE+
Sbjct: 1000 KHDLPGFLLSEPFVIKTFIPFG-----YQPTQKS-----KNKMERSQLLANKTVADIVES 1049
Query: 1106 LIGAFLSTGGENVGLIFLDRIGI------KVDFVNVPYQRQFQVHAERLVNVRH---LES 1156
+GA L G + L R+G+ K D N + + V + +H LES
Sbjct: 1050 SLGACLYDSGVDEALALGTRLGLNFYKTTKWDEWNSVFNVENLVPSAENDCFKHASGLES 1109
Query: 1157 LLNYSFRDPSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
L+ Y+F+ P LL A TH SY+ + YQ+LEFLGDAVLD+++ YL+ KY +
Sbjct: 1110 LVGYTFKHPGLLKIAFTHASYVKTTQTAVNYQQLEFLGDAVLDFIVVRYLFKKYQNKTAA 1169
Query: 1216 YLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL---YKRINITVDSFEKLS------- 1265
LTD +S V N A S K GL+ +L + ++ YK +D ++ +
Sbjct: 1170 ELTDTKSFYVCNKSLAYVSFKLGLYDFMLQDNEDIRNAYKEYKSVIDKLQQDTKIDSNHP 1229
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
S W + PK L DI ES A+++DSG F ++ P L+ ++
Sbjct: 1230 TPSEKFWLLIEP-PKFLSDIFESFVCAVYLDSGFQ----FSALEPFLKFLV 1275
>gi|194880776|ref|XP_001974538.1| GG21041 [Drosophila erecta]
gi|190657725|gb|EDV54938.1| GG21041 [Drosophila erecta]
Length = 1729
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 253/1066 (23%), Positives = 431/1066 (40%), Gaps = 186/1066 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
RNYQ +++ K N IV+L TGSGKT +AI+ ++ ++ + KP A+F+ V
Sbjct: 13 RNYQNRLVDHLTKHNGIVYLPTGSGKTFVAILTIKRFSQDMDKPLENGGKRALFMCNTVE 72
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A+K +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 73 LARQQAVALKRYTNFKVGFYVGEQGVDEWTRGQWSDEIRNNQVLVGTAQVFLDLFTQMHL 132
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + ++I+DECHH G+H Y M F L LPR+ G+T +K +
Sbjct: 133 ALSSVSIVIMDECHHGTGRHPYHEFMRLF---LCAENHKALPRVVGLTGVLLK---GNEI 186
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+K+ +LET + T + + N + +ST ++ L T+ + E
Sbjct: 187 NQVAKKLKELETTYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 237
Query: 260 -----IELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
I + T+ LDL + + +R+ V ++ + L+ L E G
Sbjct: 238 MVTQSINSQITQFFATLDLMDIGVQPVRRSKSLQSCRDPQKKSSVKQLFNDFLFQLQEYG 297
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET S A + +++K +
Sbjct: 298 IYAASIAIISLIVEFDLKRRQAETQSLKLMHRTALSLCEKIRHILVQKLRDMTDEDDDPD 357
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + ++ + +DI C++FVER T + L
Sbjct: 358 DKVNTEDVILSFSTPKM------QRFLQYLKKTFANKDHKDISCLVFVERRYTCKCIYGL 411
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G N+ Q RK Q +++FR G N+++ +S+L
Sbjct: 412 LLNFIDSTPELRNVLTPQFMVGRNTISQDFEGVMDRKNQKAAIQKFREGEANLMICSSVL 471
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR-LENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L + T S+ + Y +
Sbjct: 472 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSPNASFVLFASELEETKISKQISQYRTA 531
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + S+++ L++ YC +P+
Sbjct: 532 HAEIAEYLKYRVLERFEPEMYEVKQHFQDVIQPFINKHGAVLLPSAALILLHRYCQTMPT 591
Query: 574 DGYFKPTPKFHINKEMGICTLY-------------LPNNCPIQTVI---AQGNIKTLKQA 617
D + P ++ +E LY LP N ++ +I N K K +
Sbjct: 592 DAFGFVIPWINLLQEDECIRLYGDCARSKYVVSIKLPLNSRLKDIIYSDPMDNAKEAKMS 651
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEKHDA---------QKRGNEPYNAEH-------PI 661
A ACK L+ +G L + LP + E+ A +K G++ E P
Sbjct: 652 AAFNACKLLYNLGELNERFLPITMKERVAAIADVHFEHWKKYGDDVTAIERKENVKTVPN 711
Query: 662 YF---PPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDL 718
Y P E + P+ ++ Y Y I L+ F ++ + ++T I N
Sbjct: 712 YRTNCPAEFYDARPRVGELCY-AYEIFLEPQFESCDYTEHMYINLQTPRNYAILLRNM-- 768
Query: 719 EVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDH--NLDKLNEILDGFELRDN 776
L L + L NQ L R RV++++ L+ L++ G RD
Sbjct: 769 ----------LPRLAEMPLFSNQGKLLVRVANEPLRVVIENTEQLELLHQ-FHGMVFRDL 817
Query: 777 LEI--------------DYLLLP-----STGQLIDWKTVATV-LFPRDNGS------KHN 810
L+I YL++P + IDW V P+ S +
Sbjct: 818 LKIWQPFFVLDRRSKENSYLVVPLLLGADQQKRIDWPLVTKFQRLPQAEKSSVLQRKQQT 877
Query: 811 MNCSTMFNARIV-----HTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR 865
F +IV + ++ + K+H L TP + F
Sbjct: 878 APRPEDFEGKIVTQWYANFETKRMVVTKVHREL--TPLS------------------FME 917
Query: 866 NNGSVTTYKKHYEERYGIQL---CFDREPLLNGRRI-----FHVQNYLSKCRQQKQKEPS 917
N TY + +YG + + L+ R + F+VQN Q K +
Sbjct: 918 KNHQDKTYYEFTMSKYGNHIGDVVHKDKFLIEVRELTDQLNFYVQNRGKSSAQSK----A 973
Query: 918 KISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
+ L PELC P L + F+PSI++R+ LL A L+
Sbjct: 974 RAKIILIPELCFNYEFPGDL--WLKLIFLPSILNRMHFLLHAEALR 1017
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 190/474 (40%), Gaps = 121/474 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K ++SN L
Sbjct: 1203 LAAITSSGTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGSLTQVKSMLVSNRNLL 1262
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P I T F P+ W+ P + G + L D +L
Sbjct: 1263 YCLRDTDIPKKISTVLFTPRYTWLPPSISLPHNVLTLWRENPELANMIGPHNLRDLALGE 1322
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1323 EESMVKGYCNDINYKSFVEGCRANAQSHHAGADFSAEVNFCVGLVSIPDKVIADTLEALL 1382
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1383 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNSTEIDGFLINHY 1442
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH SY I CYQ LEF+GDA+LD+LI+VY++ +
Sbjct: 1443 HLENNLGYTFKDRGYLLQALTHPSYPTNRITGCYQELEFIGDAILDFLISVYIFENNTNM 1502
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV-------------- 1258
+PG LTD+RSA VNN A V+H LH IL + L + I+ V
Sbjct: 1503 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAMLAESISKFVHFQESQRHRVTNHV 1562
Query: 1259 -----------------DSFEKLSLGST----------------FGWESVTSFPKALGDI 1285
D + L + F + PKALGD+
Sbjct: 1563 RILLEEADVQPTSLDLDDYLDMTELNNALKSISQEEQNDQPRGEFNMSTNVDVPKALGDV 1622
Query: 1286 IESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
+E+L AI++D R EV+F +P L+ + +P+R+L E+ N
Sbjct: 1623 LEALIAAIYLDCRDLQRTWEVIFNLFKPELQEF--ARNVPINPIRQLMEHRHAN 1674
>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1588
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 184/640 (28%), Positives = 299/640 (46%), Gaps = 60/640 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR---------SYAYLLRKPSPFVAVF 73
R YQ+E E A K+NTIV L TGSGKTLIA +LLR A L++ +A F
Sbjct: 170 REYQIELFEKAKKKNTIVVLNTGSGKTLIAGLLLRHILEKEIEDRAAGKLKR----IAFF 225
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LV KV LV QQ + + + VG++ GDM + W W ++ ++ V+V T IL
Sbjct: 226 LVDKVSLVFQQHAVLDCNLEHPVGRFCGDMVDEMWSREFWAQQFEENMVIVCTAAILQKC 285
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L SY ++N I +L+ DE HH + H YA I+ +FY ++ PRI GMTASP+ +
Sbjct: 286 LTHSYIRMNQINLLVFDEAHHTKKNHPYARIIKDFYIKV--PAKEMRPRILGMTASPVDA 343
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
+ D LE L++S++ T + ES+ SN + + + + Y +P T L
Sbjct: 344 QT-----DVKIATAQLECLLHSEIATVSEESLYSNSTARNITEIEVH-YSSLPVPYETKL 397
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
+++ + + + L +A S LG W A + +
Sbjct: 398 YQKVSALVGCNPHFSKELSFAKA------------------ATSSLGPWAADRFWQLFLT 439
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIV 373
E+ ++ D + A+ + V G E+ + + LD L+ K++
Sbjct: 440 DETILRLAQRTDMTYSGLKSNDKETAAVQKLRDVIQGHEF---NSATPTLDQ--LSIKVL 494
Query: 374 CLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS--GIQ 430
L E L L + RCI+FVE +TA++L L + + + G+ + G+
Sbjct: 495 RLWEELKLRFTNGPGYRCIVFVEMRLTAVLLADLFKQEGIKLPYLSPAMLVGSQAATGLA 554
Query: 431 CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRAR 490
S K+Q + +FR+ VN + AT + EEGLD+ CNLV+ FD ++V +IQS+GRAR
Sbjct: 555 NMSFKQQVLTIHKFRQAEVNCLFATQVAEEGLDIPDCNLVMRFDLYKSVIQYIQSKGRAR 614
Query: 491 MQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--------EVLSHASLPCSPLNNHMYG 542
Q+S+YL ++ G+ + N +R+ + + + S L ++
Sbjct: 615 RQDSEYLSFIEGGNGRQARVVLQATYDQNVLRRFCNALPEDKKIMGFDISSSVLKGDLHY 674
Query: 543 EDFYHVESTGTIATLSSSVSLIYFYCSRLP--SDGYFKPTPKFHINKEMGICTLYLPNNC 600
+ Y ++STG + T +SS+ ++ + S L +D P + I + LP
Sbjct: 675 KT-YLIKSTGAMLTWTSSLEVLANFASSLRQFNDEVLAPEYVVINQGQNFIAEVQLPAKS 733
Query: 601 PI--QTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
PI T N+K + +A E CK+L + + NL P
Sbjct: 734 PIMHMTGFPHSNMKAARCSAAFEMCKELIKKKYIDHNLHP 773
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/463 (30%), Positives = 208/463 (44%), Gaps = 77/463 (16%)
Query: 926 ELCRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPT 978
++C +I+ P+ +ST +F F P+++HR+ S+++A LD C + + I
Sbjct: 1051 KICYLILEPMRVSTLPIDTVVMAFAF-PALIHRIDSVMIA-------LDACKLLELNIRP 1102
Query: 979 IKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHE 1024
LEA+T D H E LE LGD FLK A + +F +++E
Sbjct: 1103 DLALEAVTKDSDNSDEHDKEKINFQSGMGKNYERLEFLGDCFLKMATTIAIFTENPDSNE 1162
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR 1084
V + +I N L ++ LP ++R++SFD + W G L G+
Sbjct: 1163 FGYHVDRMLLICNQNLFNKAVDRNLPEYVRSKSFDRRSWYPSGLR----------LIRGK 1212
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DF 1132
+ V R + K+VADV EALIGA T ++ R V D+
Sbjct: 1213 EGSVNLRHALADKSVADVCEALIGAAYLTYADSSDFDMAIRAVTAVVKSKNHLMTSWGDY 1272
Query: 1133 --VNVPYQRQFQVHAERLVNV-RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY--- 1186
P QF + R ++ L Y F+ P+LL A H SY PR Y
Sbjct: 1273 YAAYTPPAWQFADPTPMQKELARQIKDKLGYEFKSPALLRSAFKHPSY-----PRAYENL 1327
Query: 1187 ---QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
QRLEFLGDA+LD + +L++K+P P +LT+ ++A V+N A VK GLHKH+
Sbjct: 1328 PDYQRLEFLGDALLDMVCVDFLFHKFPDADPQWLTEHKTAMVSNQFLASLCVKLGLHKHV 1387
Query: 1244 LHASHELYKRINITVDSFEKL----SLGSTFG---WESVTSFPKALGDIIESLAGAIFVD 1296
L L + + V S E TF W +V PK L D++E+ GAIF+D
Sbjct: 1388 LSGHASLLNQTHDFVVSLESAKKDGEADGTFTQAYWINVQHAPKYLSDVVEAYIGAIFID 1447
Query: 1297 SGCNR---EVVFQS-IRPLLEPMITPETM-RFHPVRELTEYCQ 1334
SG + V F + IRP M ++ HPV L Q
Sbjct: 1448 SGYDYNHVRVFFDTHIRPFFTDMALYDSFASRHPVTNLAHILQ 1490
>gi|315044595|ref|XP_003171673.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
gi|311344016|gb|EFR03219.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
Length = 1518
Score = 213 bits (542), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 190/660 (28%), Positives = 310/660 (46%), Gaps = 91/660 (13%)
Query: 4 VSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL 63
+SM + ++ A + R YQLE E A ++N I LETGSGKTLIA++LL+ +++
Sbjct: 93 LSMTNIIAKQDYASIIHDPREYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLK---HVI 149
Query: 64 RKP--------SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKE 115
+ P ++ FLV V LV QQA ++ + K+ K+ G M D W+ TW+
Sbjct: 150 EQELTDRGVGLPPRISFFLVDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEG 209
Query: 116 EMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET 175
++ V+V T ++L L S+ ++ I +LI DE HHA+ +H YA I+ +FY + LE
Sbjct: 210 HFKRNMVIVCTAEVLHQCLLHSFIQIGQINLLIFDEAHHAKKEHPYARIIKDFYLKELER 269
Query: 176 GDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA 235
PRIFGMTASP+ +KV + LE +++S++ T ++ S+L +
Sbjct: 270 K----PRIFGMTASPVDAKV-----EVVSAAKTLENMLDSQIATASNPSLLRQSVARPIE 320
Query: 236 KFKFYKYDEIPH--ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
+ Y E P LYT L ++ I++ LE + K S+ S+ L
Sbjct: 321 EVWEYDRLEAPFETPLYTQLREKFGDIKV-----LEKI-----------FKFSRETSSNL 364
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
+W + ET+ E+ ++K + +S A
Sbjct: 365 GSWCSDWIWSYCLSEETLPKLEA---------RSNRPLMKNLANHSSGDTEAERIRDAG- 414
Query: 354 SIGDDSKFN---LDSGLLTEKI-VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSE 409
+I D +F + LL+ K+ + E L ++ D RCI+F + TA +L+ L +
Sbjct: 415 AIIKDHEFGDPIANPKLLSPKVLLLRDELLRRFKENPDTRCIVFTAQRHTARILRDLFQK 474
Query: 410 LLPRHCTWKTKYI----------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
+ +++YI G+ G+ R++ ++ FR+G +N + ATS+ E
Sbjct: 475 I-------RSQYIRPNLLVGVRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAE 526
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EGLD+Q CNL++ FD T+ +IQSRGRAR S + MV+ + ++ +E S
Sbjct: 527 EGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHTESTFAHMVERNNLIHETAVEEVRRS-- 584
Query: 520 KMRKEVLSH--ASLPCSPLNNHMYGEDF----------YHVESTGTIATLSSSVSLIYFY 567
+EVL+ SLP L D Y ++STG T SS++++ Y
Sbjct: 585 ---EEVLTRFCKSLPEDRLLKGSGDIDMIMEKDRQQKSYIIKSTGAKLTYPSSLAVLAHY 641
Query: 568 CSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEAC 623
S L + + I+ + G IC LP PI+ + + + L KQ+A E C
Sbjct: 642 ASTLQYEKELSTQVSYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLFAKQSAAFETC 701
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 212/466 (45%), Gaps = 61/466 (13%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C +P+L I +N+L QK + + + + E +I + L+T F F
Sbjct: 959 CNWDQPVLRSELIQLRRNFLDIDENQKS---ATVDYYVCVEALKISSISVPLAT-QIFVF 1014
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITT-KKCQEDFHLES----- 998
P+++ R++S L+A L+ C + + IP LEA+T + ED+ +E
Sbjct: 1015 -PAMIWRMESYLIA-------LEACEKLQLKIPPELALEALTKDSENTEDYGMEQIKFQS 1066
Query: 999 --------LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLP 1050
LE LGD FLK A S LF +N E VK+ +I N L ++
Sbjct: 1067 GMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIF 1126
Query: 1051 GFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTG-RKKVKSKTVADVVEALI 1107
FIR+ SF + W G +L G+ K G + KT+ADV EALI
Sbjct: 1127 KFIRSRSFSRRAWYPEGL----------TLLKGKDKKEGPNGPEHALADKTIADVCEALI 1176
Query: 1108 GAFLSTGGENVGL--------IFLDRIGIKVD-------FVNVPYQRQFQVHAERLVNVR 1152
GA L GG + +F++ +V+ ++P + A +
Sbjct: 1177 GASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSKLYSLPSYQTAVASASEIDVAN 1236
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
++S L Y FR P LL A H SY +P CYQRLEFLGD++LD + +L+ +YP
Sbjct: 1237 QIKSKLGYCFRYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFERYP 1295
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL---G 1267
P +LT+ + A V+N +V LH H++H S+ L +I + + + + G
Sbjct: 1296 DKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIKMEG 1355
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
+ W PK L DI+E+ GA+FVDS N +VV R ++
Sbjct: 1356 NLEAWTYTNEPPKCLPDIVEAYLGAMFVDSNFNFDVVDDFFRKFIQ 1401
>gi|195996181|ref|XP_002107959.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
gi|190588735|gb|EDV28757.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
Length = 685
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 295/599 (49%), Gaps = 90/599 (15%)
Query: 860 NSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQ------ 913
++L+ +N + TY Y+E+YGI + +PLL + + +N L QK
Sbjct: 99 DNLWGESNLNFITY---YQEKYGIMIKNTTQPLLRPKYLSKKRNMLRSNSGQKSQFSVKS 155
Query: 914 -----------------KEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
K SK+ EL PELC+ + P S+ + S + SI+ R++S+
Sbjct: 156 CNKSQTQSVADTITHHSKGKSKV-IELIPELCKRSIFPASV--WKSLACIRSILWRMESM 212
Query: 957 LLAVNLKNMLLDHC----------MQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSF 1006
L +N + + +QN ++ T+ +L+A+T + +DF+LE+LE LGDS+
Sbjct: 213 LSVKEFENKMQESWIVGSSRNERQLQNNSL-TMTILKALTLARANDDFNLETLEFLGDSY 271
Query: 1007 LKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPK-MWII 1065
LKYA S F +Y HEG LS K +I+SN L ++G + LPG+I + D +W+
Sbjct: 272 LKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLYQIGIKMGLPGYIIGHNVDQNDIWVP 331
Query: 1066 PG-------DNSGSYE-LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
PG D+ G E L+ +L +++ T +K+K+K +ADV+EAL+G L GEN
Sbjct: 332 PGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPT--QKLKNKCIADVMEALLGGILLELGEN 389
Query: 1118 VGLIFL-DRIGIKV-----------DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDP 1165
F+ + +GIKV D + + H N++ LE++L YSF+D
Sbjct: 390 SANNFITNNLGIKVGRLSHNIAKLDDDARKEISKIYNAH-----NLKDLEAVLGYSFKDR 444
Query: 1166 SLLVEALTHGSY---MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRS 1222
LL+ ALTH +Y + E CYQRLEFLGDA+L Y++ + Y+ P L D
Sbjct: 445 KLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVVRHCYHANNNYKPADLHDFVE 504
Query: 1223 ASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD------------SFEKLSLGSTF 1270
AS+ N+ A+ ++ +G+HK+ + S L+ +IN + S E+ +L +
Sbjct: 505 ASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQLLQIVDTNEECEQRLSTEEKALVYSN 564
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM--ITPETMRFHPVRE 1328
+ PK LGD+ ESL GAIF+D G + EVV + LL+P I + + P+R
Sbjct: 565 SLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVVNDLVLRLLQPQHAIFAQGVPKSPIRI 624
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
L E K+ K ++ V +G F T ++ K KKV C L+
Sbjct: 625 LHEKFPSGLLFKKEKTEDNSLRKLSLQV---PDGSYFTATGINY--KHCKKVLCMMALR 678
>gi|425626934|gb|AFX89025.1| DCR2 [Mayetiola destructor]
Length = 1646
Score = 213 bits (541), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 184/664 (27%), Positives = 322/664 (48%), Gaps = 58/664 (8%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
+R YQ E + ++ NTI++L TG+GKT IAIM ++ +A L+KP ++FL
Sbjct: 17 SRGYQDEIFKKCVENNTIIYLPTGAGKTYIAIMAMKHFANDLQKPISEGGKRSLFLTNTK 76
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
L QQAE I+ T L+V Y GD+ VD W W EE +H+V+ T QI+LD +R Y
Sbjct: 77 ALATQQAEYIQKLTPLRVAVYTGDLNVDAWKKDKWYEEFDQHQVITATVQIVLDIIRHGY 136
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
KL+ +++ DECH+A+G+H A +M +F + + + PR+ G++ S S +
Sbjct: 137 LKLSNFNLIVFDECHNAQGEHPMAHLMAKF----TDIPERDHPRVIGLSGSLTSSSIKP- 191
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST-AKFKFYKYDE-IPHALYTHL--- 253
Q+ +++ DLE + + T + + ST K ++++ P +
Sbjct: 192 -QNVLKELKDLEAKFRATIVTVQGLNAYVEVLMHSTKPKESCIQFEQNAPMEFIDFIVNK 250
Query: 254 ADELA-MIE---LKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
ADEL IE + +TR+ + L EL V I+S L G++ L +
Sbjct: 251 ADELKNTIESWPIINTRNTTDETLKRV-LELFEFSVCFIDSACLTINYHTGLYGGLLS-- 307
Query: 310 TISCYESDFFAWEQLDGFGETIIKK-----FGSDASQALVTYVPSGAEWS--IGDDSKFN 362
T++ + D + I+ + + S+ + +G E D++
Sbjct: 308 TLATIVELELKKREADTTFDAILHRISERLYDSEEEEEEEEKETNGMEIDNKTIDETNIA 367
Query: 363 LDSGLLTEKIVCLIESLLEY--RGVED-----IRCIIFVERVITAIVLQSLLSELLPRH- 414
D ++ ++ LL Y + V+D ++ +IFV+R +A +L ++ + +
Sbjct: 368 EDPVMILTNSTPQVQRLLIYLKKFVQDDPKRQLKGLIFVKRRYSAKILCHIIRRFMNSYP 427
Query: 415 -CTWKTKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
+ ++ G+N+ I ++K + ++++F+R VN+IV TS+LEEG+D+Q CN
Sbjct: 428 DINIRVDFMTGSNTKIPDSIETILAKKCNDRVLDKFKRDEVNLIVTTSVLEEGIDLQECN 487
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS-TTQSRLENYLASGNKMRKEVLS 527
LVI FD ++Q++GRARM NS+Y++MV G + +++ + + +R+ ++
Sbjct: 488 LVIAFDRPEHYRQYVQTKGRARMPNSEYVIMVPMGQQLKLEQKVKEWGEVNDILRQYLVE 547
Query: 528 HASLPCSPLNNHM-------YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
A P M + E + + G + S+VSL+ YC LP D + P
Sbjct: 548 RAVDRIQPNKEDMNKIAEREFNEQYKTI--GGAVIDHFSAVSLLNRYCDVLPRDQFTDPV 605
Query: 581 PKFHINKEMG---ICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTD 634
+ + G + LP PI I A N+K K++A +AC KL++ AL +
Sbjct: 606 ITWRRTEVKGGKIQVHILLPIQSPISAEICGNAMPNLKLAKRSAAFKACIKLYEQKALNE 665
Query: 635 NLLP 638
N +P
Sbjct: 666 NAMP 669
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 194/409 (47%), Gaps = 75/409 (18%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L AITT + FH+E E LGD+FLK+ S L +Q+ HEG LS K +I+ N L
Sbjct: 1166 MLAAITTASAGDLFHMELFEVLGDAFLKFGVSLSLMHNHQDWHEGFLSAMKGKIVGNRNL 1225
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-------------------------------D 1068
C + KLPG I +FDPK W P +
Sbjct: 1226 CYNAIKMKLPGMINKNNFDPKDDWQPPMFKVDDVIKNKMRQKNISPNLLFELSLSKMEIE 1285
Query: 1069 NSGSYELNDDSL---FN--------GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
+ E N + L FN G V G +++ KT +D VEA++GA L + G +
Sbjct: 1286 SGKVSEQNVEMLEQTFNRYVNNDQEGSMQNVLGLQRIADKTSSDCVEAILGACLVSIGVD 1345
Query: 1118 VGLIFLDRIGI--KVDFVNVPYQRQFQVHAER-------------LVNVRHLESLLNYSF 1162
L+ I K + V++ Q H R L N LE+ + Y F
Sbjct: 1346 RTFKVLEMFNILPKRENVDITKLLSNQFHNPRVRTNIKDIEIDSFLPNHTELETNIGYKF 1405
Query: 1163 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRS 1222
+D + L++ALTH +Y + CYQ+LEFLGDAVLD+LIT Y+Y + P + PG LTD+RS
Sbjct: 1406 KDRAYLLQALTHPTYPTNRVTGCYQQLEFLGDAVLDFLITSYIYERCPEMDPGKLTDLRS 1465
Query: 1223 ASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS---------------FEKLSLG 1267
A VNN A V++ +H +IL + L + I+ VD E+ +
Sbjct: 1466 ALVNNVTLACICVRYNIHLYILSQNAALTEFISQFVDYQIAHNHEVTDHVDLLMEEKDVE 1525
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
PK LGD+IE+L GAIF+DSG N EV ++ I L++ I
Sbjct: 1526 CKMA--EYVEVPKTLGDVIEALIGAIFLDSGNNLEVTWKVIYGLMQKEI 1572
>gi|413918887|gb|AFW58819.1| hypothetical protein ZEAMMB73_957371 [Zea mays]
Length = 511
Score = 213 bits (541), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 268/533 (50%), Gaps = 55/533 (10%)
Query: 388 IRCIIFVERVITAIVLQSLLSELLPRHCT--WKTKYIAGNNSGIQCQSRKKQNEIVEEFR 445
++CI+FV+R+I A V+ +L L C W+ +++ G +SG++ SR K + I+E+F
Sbjct: 1 MKCIVFVKRIIVARVVVQILQNL---KCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFS 57
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
G VN++VATS+ EEGLD+Q+C LV+ FD TV SFIQSRGRARM S Y+ +++ G+
Sbjct: 58 SGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNH 117
Query: 506 TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYG---EDFYHVESTGTIATLSSSVS 562
+ + L++Y+ M KE+ S N M+ E+ Y V TG + + SVS
Sbjct: 118 SQEKLLDDYITGEIIMDKEINLRTS-------NDMFNCLEENIYRVNDTGASISTACSVS 170
Query: 563 LIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQAA 618
L++ YC LP D +F P+P F ++ +C L LP N + V Q + K+ A
Sbjct: 171 LLHRYCDNLPRDIFFVPSPSFFFVDDVDGIVCKLILPPNAAFRQVNGQPCPSKDEAKRDA 230
Query: 619 CLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELV---------- 668
CL+AC KLH++GALTD LLP K N N + F EL
Sbjct: 231 CLKACIKLHELGALTDFLLPGQGSRKIKVSTTNNSESNKDDDESFREELYEMLIPAVLRP 290
Query: 669 NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-V 727
++ D+ H Y IE D + L + L E +K++ +L + R R+
Sbjct: 291 SRCKLDSSFKLHFYYIEFIP-IPADRRYQMFGLFVINRLPEESEKLDVELHLARARIVKA 349
Query: 728 NLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID---YLLL 784
+K+LG+I+ +++L FQ +V++D + + IL G + L++D YLLL
Sbjct: 350 GIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSYILLGND--GALDMDSTFYLLL 407
Query: 785 PSTGQ-----LIDWKTVATVL----FPRDNG-SKHNMNCSTMFNARIVHTKSGPLCTCKI 834
P + +IDW V L F G S H+ S + N + G +
Sbjct: 408 PIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHD---SYLPNESL-KLLGGTYNKADV 463
Query: 835 HNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCF 887
SLV TPH + + +L NA S NG+ TY +H+++R+G++ F
Sbjct: 464 IGSLVYTPHTDLFFFVDAILDGTNAKSEL---NGA--TYAEHFKQRHGVRTFF 511
>gi|80979119|gb|ABB54762.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 213 bits (541), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 175/689 (25%), Positives = 306/689 (44%), Gaps = 90/689 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y GD GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN--LPRIFGMTASPIKSKVSS 197
L+ + V+I+DECHH G H Y M RL D N LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFM-----RLFLCADKNKALPRVVGLSGVLIK---GN 173
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 174 EIKQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQER 224
Query: 258 AMI-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSE 298
+ + + + LDL + + +R+ + ++ + L+ L E
Sbjct: 225 VFLVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQE 284
Query: 299 LGVW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALV 344
G++ L + AET+S A + +++K +
Sbjct: 285 YGIYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDD 344
Query: 345 TYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQ 404
E I S + ++ + +++ + +DI C++FVER T +
Sbjct: 345 PDDKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIY 398
Query: 405 SLLSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATS 456
LL + + +++ G NS Q RK Q +++FR G N+++ +S
Sbjct: 399 GLLLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSS 458
Query: 457 ILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYL 515
+LEEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y
Sbjct: 459 VLEEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYR 518
Query: 516 AS----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRL 571
+ ++ VL + H + G + SS++ L++ YC +
Sbjct: 519 TAHAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSM 578
Query: 572 PSDGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLK 615
P+D + P +E G C ++ LP N ++ I ++K K
Sbjct: 579 PTDAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAK 638
Query: 616 QAACLEACKKLHQIGALTDNLLPDIVVEK 644
+A +ACK L+Q+G L + LP + E+
Sbjct: 639 VSAAFKACKLLYQLGELNERFLPITLKER 667
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS------------ 1260
+PG LTD+RSA VNN A V+H LH IL + +L + I V
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1261 ---FEKLSLGST---------------------------------FGWESVTSFPKALGD 1284
E+ + ST F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTELKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|80979131|gb|ABB54768.1| Dicer-2 [Drosophila santomea]
Length = 1719
Score = 212 bits (540), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 255/1059 (24%), Positives = 443/1059 (41%), Gaps = 172/1059 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y G+ GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGEQGVDXWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQSQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
EEG+DVQ+CN V++ DP +T ++Q++GRAR N++++L D S+ +
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNANFVLFSSELDRGKISQQIAQYRTA 520
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPS 573
+ E L L + + + F V G + SS++ L++ YC +P+
Sbjct: 521 HAEIAEYLKDRVLERTEPEMYXVKQXFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 580
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P + +E G C ++ LP N ++ I ++K K +
Sbjct: 581 DAFGFVIPXXNSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKDTIYSDPMDSVKAAKVS 640
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEKHDA---------QKRGNE---PYNAEHPIYF-- 663
A +ACK L+Q+G L + LP + E+ A +K G++ + P
Sbjct: 641 AAFKACKLLYQLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRN 700
Query: 664 -----PPELVNQSPQDTKITYHCYLIELKQHF---NYD-------ISARNIVLAMRTELE 708
P E + P+ ++ Y Y I L+ F +Y + RN + MR +L
Sbjct: 701 YKTDCPAEFYDARPRVGELCY-AYEIFLEPQFESCDYTEHMYVNLRTPRNYAILMRNKLP 759
Query: 709 SEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEIL 768
+ L +G+L V R+ P +V++ Q+ L L +I
Sbjct: 760 ---RLAEMPLFSNQGKLHV------RVANEPLKVVIQSSEQLELLHQFHGMVFRDLLKIW 810
Query: 769 DGFEL--RDNLEIDYLLLP-----STGQLIDWKTVATV--LFPRDNGSKHNMNCSTM--- 816
F + R + E YL++P + IDW V L +N S H T
Sbjct: 811 QPFFVLDRRSKENSYLVVPLILGADQQKCIDWPLVTKFQRLPQAENSSVHQRKQQTAPXP 870
Query: 817 --FNARIV-----HTKSGPLCTCKIHN-----SLVCTPHNGQIYCITGVLGHLNANSLFT 864
F +IV + + + K+H SL+ H + Y + S +
Sbjct: 871 EDFEGKIVSQWYANFEHKRMLVTKVHRELTPLSLMEQNHQDKTY-------YEFTMSKYG 923
Query: 865 RNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELP 924
+ G V +++++ I++ RE L + F+VQN + K S+ L
Sbjct: 924 NHIGDVV-----HKDKFMIEV---RE--LTDQLNFYVQNR----GKSSAKSKSRAKIILI 969
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
PELC P L + F+PSI+ R+ LL A L+
Sbjct: 970 PELCFNYEFPGDL--WLKLIFLPSILRRMHFLLHAEALR 1006
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 191/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKXISTILFTPRYTWLPPSISLPHNVLALWRENPXLAGMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNSFVEGCRANAQTHHAGADFSTEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI------------------ 1254
+PG LTD+RSA VNN A V+H LH IL + +L + I
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 ------------------------------NITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
+I+ + + F + PKALGD
Sbjct: 1552 RILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNYPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P L+ + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELQEFT--RNVPINAIRQLTEHKHAN 1664
>gi|195023643|ref|XP_001985724.1| GH20958 [Drosophila grimshawi]
gi|193901724|gb|EDW00591.1| GH20958 [Drosophila grimshawi]
Length = 1713
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 252/1043 (24%), Positives = 450/1043 (43%), Gaps = 145/1043 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
AR+YQL +E K+N I++L TGSGKT +AI+ L+ ++ K A+FL V
Sbjct: 3 ARDYQLRIVEYIAKRNGIIYLPTGSGKTYVAILALKRFSQNFDKSIEEGGQRALFLCNTV 62
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
L QQA ++ +T+ KVG Y G++GVD W + W +E+ ++VLV T Q++LD +
Sbjct: 63 ELARQQAVFVRRYTNFKVGFYVGEVGVDNWVRSKWTDEIRDNQVLVGTAQVILDMALQKH 122
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
L + ++ILDECHH G H Y M F ++ + + LPR+ G+T IK +
Sbjct: 123 LDLKSVSIVILDECHHGTGHHPYHEFMRLF--QMAQANATPLPRVVGLTGVLIK---GNE 177
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF-YKYDEIPHALYTHLADEL 257
++ +K+ +LE+ + T + + N + ST ++ Y++ + +E+
Sbjct: 178 IKNVAKKLKELESTYLGNIVTVSDMKEMENVMLHSTKPREYLVAYNDRNQTF--EVIEEI 235
Query: 258 AMIELKHTRSLENLDLN----------EAQAELIRKKVSKIN-STLLYCLSELGVWLALK 306
+ L + +SL+ + + Q + +K V K+ + LY L G++
Sbjct: 236 RSLILSYLKSLDLITIPNQPVRMSKGLHVQRDSNKKSVIKLMLNDFLYQLDNYGIYAG-- 293
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
+ +S Y Q ETI+ + L + + DD + +
Sbjct: 294 SIAILSMYAEFDIKRRQ----SETIVMRNTYRLVVGLCDRIRHMLVNQLTDDDED--EKA 347
Query: 367 LLTEKIVC-----LIESLLEY-------RGVEDIRCIIFVERVITAIVLQSLLSELLPR- 413
TE+++ ++ L+Y + +DI C++FVER T + LL + +
Sbjct: 348 ANTEEVIMNFSTPKVQRFLQYLKDTFANKNPKDICCLVFVERRYTCKCIYGLLLKYIAAV 407
Query: 414 ---HCTWKTKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
+++ G N GI R+ +++FR G N++V +S+LEEG+DVQ
Sbjct: 408 PELRNVLAPQFMVGRN-GIFLDFESVLERRWLRSAIQQFRDGEANMMVCSSVLEEGIDVQ 466
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLASGNKMRK- 523
+CN V++ DP +T ++Q++GRAR +++ ++L + S +++ Y + ++R+
Sbjct: 467 ACNYVMILDPIKTFNMYVQTKGRARAKDASFVLFSSELNKPKISLQIQQYRQAHVEIREY 526
Query: 524 ---EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT 580
VL + + H + +V G + SS++ LI+ Y ++P+D +
Sbjct: 527 LKDRVLERSDPKMDEIREHFQDQIKPYVNQNGAVLLASSALMLIHRYVQQMPTDAFGTVL 586
Query: 581 PKFHI-----NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKK 625
P F + +E+ + +L LP N ++ I N K +A +AC K
Sbjct: 587 PWFKLLDPNERRELTQNSQGKYVVSLNLPLNSALRDTIYSDPMPNGHWAKISAAFKACIK 646
Query: 626 LHQIGALTDNLLPDIVVEK----------------HDAQKRGNEPYNAE-HPIYFPPELV 668
LH++G L + LP V E+ + R E N + P EL
Sbjct: 647 LHELGELNERFLPKTVTERIADIANVHFEHWKKYGDNVTLRSKEAKNINTYDTRCPSELY 706
Query: 669 NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTE-------LESEIKKVNFDLEVE 721
+ P+ + Y Y I L+ F+ + ++ +++T + L
Sbjct: 707 DAMPRLGETCY-AYEIILEPQFDRNDYTFHVYDSLQTRRNYALLLRKRLPLLAEMPLFSH 765
Query: 722 RGRLTVNLKHLGRIQLIPNQVLL--CRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEI 779
+G+L V + ++ +I Q L + F + +FR I+ + + +LD R N E
Sbjct: 766 QGKLHVRVAEQPQLMIIETQQQLDELQHFHVMIFRDIL--RIWQPFFVLD----RRNAEN 819
Query: 780 DYLLLP---STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNAR---IVHTKSGPLCTCK 833
+L++P + G +DW V CS + + + K+ P K
Sbjct: 820 SFLVVPMSATPGGGLDWPLVKQF-------------CSRLPKVQATTVAQRKTMPPPNPK 866
Query: 834 IHNSLVCTP----HNGQIYCITGVLGHLNANSLFTRNNGSVTTYK---KHYEERYGIQLC 886
+ T ++ + +T V L A S+ + YK Y G +
Sbjct: 867 DFEGKIVTQWYANYDEKRMLVTKVHTDLTAMSMMQEKQQENSYYKFTMSKYSNYIGDIVH 926
Query: 887 FD------REPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTF 940
D RE L + F+VQ + K + SK+ L PELC P L +
Sbjct: 927 KDHFLIEVRE--LTDQMNFYVQQRVKTSALSKLR--SKVM--LIPELCFNFGFPGDL--W 978
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
F+PSI+ R+ +L A L+
Sbjct: 979 VKLLFLPSILRRVHYMLHAEALR 1001
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 199/498 (39%), Gaps = 126/498 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E E LGD FLK +A+ L Y +EG L+ K ++SN L
Sbjct: 1185 LAAITYAGSVDVFDMERFELLGDCFLKLSATLYLASKYPKWNEGTLTQVKSTLVSNRNLL 1244
Query: 1042 KLGCEQKLPGFIRTESFDPK----------------MW--------IIPGDNSGSYELND 1077
+ +P I F PK +W ++ N + +++
Sbjct: 1245 YCIRDTDIPSRICFTLFTPKYFWLPPCLSLPQNVQQLWQQHPDKAALVGPHNLRNLTMSE 1304
Query: 1078 DSLFNGRKI------------------------------YVTGRKKVKSKTVADVVEALI 1107
+ +F K + G+ K+ +K +AD +EAL+
Sbjct: 1305 EEVFGNGKCAESTYNSFLDSCRANQQTHNAGMDFSSEVDFCVGQVKMPNKVLADTLEALL 1364
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVH---------------AERLVNVR 1152
G + G G L+ GI + P + + E L+N
Sbjct: 1365 GVIIKNYGLQHGFRMLEYFGICKPDIGKPLTQLLDLQLGSTQLRTNITKREVDEFLINHS 1424
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE L Y+FRD + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1425 ALEHNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFVGDAILDFLISAYIFEHKTRM 1484
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILH------------------ASHELYKRI 1254
+PG LTD+RSA VNN A V+H +H IL +H + ++
Sbjct: 1485 TPGQLTDLRSALVNNTTLACICVRHRIHFFILAENAMLSDSIQNFVRFQETQNHRVTNQV 1544
Query: 1255 NI----------TVDSFEKLSLGST---------------------FGWESVTSFPKALG 1283
I +DS ++L + + + PK LG
Sbjct: 1545 RILMEESDLMPGPLDSDDELEMAEADEQQASQPAITADTKKPEVGEYNISTNVDVPKTLG 1604
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMK 1341
D++E+L AI++D + +Q + L EP + + +P+R+L + H S K
Sbjct: 1605 DVLEALIAAIYLDCR-DLNTTWQVVYKLFEPELLEFSRNVPLNPIRQLND-----HKSAK 1658
Query: 1342 KPVASRISGKAAVTVEVQ 1359
++ ++ K V V Q
Sbjct: 1659 PIYSAPVTDKNQVMVTCQ 1676
>gi|80979117|gb|ABB54761.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 173/685 (25%), Positives = 312/685 (45%), Gaps = 82/685 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y GD GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VWLA------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS 354
++ A L A + +++ + + + ++ +K LV + +
Sbjct: 287 IYAASIAIISLIAEFDLKRRQAETLSLKLMHRTAMSLCEKI----RHLLVQKLRDMTDED 342
Query: 355 IGDDSKFNLDSGLLT------EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
D K N + +L+ ++ + +++ + +DI C++FVER T + LL
Sbjct: 343 DDPDDKVNTEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL 402
Query: 409 ELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS Q RK Q +++FR G N+++ +S+LEE
Sbjct: 403 NFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEE 462
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS-- 517
G+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 463 GIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHA 522
Query: 518 --GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
++ VL + H + G + SS++ L++ YC +P+D
Sbjct: 523 EIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDA 582
Query: 576 YFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P +E G C ++ LP N ++ I ++K K +A
Sbjct: 583 FGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAA 642
Query: 620 LEACKKLHQIGALTDNLLPDIVVEK 644
+ACK L+Q+G L + LP + E+
Sbjct: 643 FKACKLLYQLGELNERFLPITLKER 667
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 NITVDSFE-----------------KLSLGSTFGWESVTSFPK-------------ALGD 1284
I ++ + K +L S E PK ALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|268576156|ref|XP_002643058.1| C. briggsae CBR-DCR-1 protein [Caenorhabditis briggsae]
Length = 1863
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 198/664 (29%), Positives = 300/664 (45%), Gaps = 130/664 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A K+NTIV L TGSGKT IA++LL+ Y + P A F+V KV
Sbjct: 14 RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPLENGGKRAFFVVEKVN 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQA I++HT KVG+ G + W T E M ++ V+V+T Q LLD + +Y
Sbjct: 74 LVEQQAAHIEVHTSFKVGQVHGQTSNELWKSTETCDEFMRQNHVVVITAQCLLDLINHAY 133
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+L VLI DECHHA G KH Y IM+++ + L+ +PR+ G+TAS IK KV+
Sbjct: 134 VRLQDTCVLIFDECHHALGSKHPYRLIMSKY--KELKKAGMPVPRVLGLTASLIKEKVAP 191
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNF--IPFSTAKF-KFYKYDEIPHALYTHLA 254
+ ++++ LE +++S + T + LS + PF + ++ D++ Y +
Sbjct: 192 DKLS--EQLNKLENVLDSVIETASDLVSLSKYGARPFEAIILCRNFEADQLRLRNYETIR 249
Query: 255 DELAMIE--LKHTRSLE-NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
D L E + T +LDL+ R+ + T L +LG W A K T
Sbjct: 250 DLLKDTEDFVNQTSVFHPDLDLDP------RRSIRDSLKTTKAVLRQLGPWAAWK---TT 300
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV----PSGAE-WSIGDDSKFNLDSG 366
+E + + + E + F + A ++T P E S+ D KF
Sbjct: 301 QMWEKELSKLTKTNILPEKAL-TFLNLARTTMITIKRLLEPEMREVRSLADLQKF----- 354
Query: 367 LLTEKIVCLIESL-----------LEYRGVEDIRCIIFVERVITAIVLQSLLSELL---P 412
+ + V + E L L E++ IIFV++ A L ++ + P
Sbjct: 355 -VPHRFVRIFEILEMFQPGFQTERLRKEKPENLSAIIFVDQRYIAYSLHIMIKAIRSWEP 413
Query: 413 RHCTWKTKYIAG---------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLD 463
+ + Y+ G +N G+ K+Q + + F + +NV++ATS+LEEG+D
Sbjct: 414 KFKFLNSDYVVGASGQNLANSDNQGLH----KRQTDTLRRFHKSEINVLIATSVLEEGVD 469
Query: 464 VQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK 523
V+ CN+VI FD + S++QS+GRAR S Y+++V D T
Sbjct: 470 VKQCNVVIKFDRPLDMRSYVQSKGRARKPGSTYVVLVDQKDVTAY--------------- 514
Query: 524 EVLSHASLPCSPLNNHMYGEDFYH-----VESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
CS L + ++ H VE G YC+
Sbjct: 515 ---------CSKLPSDIFTRLVPHSRIIPVEDRGVTK-----------YCAE-------- 546
Query: 579 PTPKFHINKEMGICTLYLPNNCPIQTVI----AQGNIKTLKQAACLEACKKLHQIGALTD 634
L LP N PI+ I A N K + A LEAC++LH G L D
Sbjct: 547 ---------------LLLPINSPIKHAIILKDAMPNKKIAQMAVALEACRQLHLKGELDD 591
Query: 635 NLLP 638
NLLP
Sbjct: 592 NLLP 595
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 223/511 (43%), Gaps = 115/511 (22%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L A+TT + LE ET+GDSFLK+A + L+ T Q HEG LS + + +SN L
Sbjct: 1351 LLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQEQHEGKLSWARSKEVSNCNL 1410
Query: 1041 CKLG----------------------------CEQKLPGFIRTESFDPKM-WIIPG---- 1067
+LG C+ K P E D +M I+ G
Sbjct: 1411 YRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDAEEKDKEMERILSGQTIE 1470
Query: 1068 ---DNSGSYELNDDSLFNGRKIYVTG--------------------------RKKVKSKT 1098
+N ++L D K V G ++ + K
Sbjct: 1471 EKPENKTGWDLGQDEA----KKTVDGIETITFQKQTRILNEDITPLPYNLLTQQNISDKA 1526
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYQRQFQVH 1144
+AD +EALIG L T G N L ++ +G+KV F++ P
Sbjct: 1527 IADAMEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQATDVQPPLLRFIDTPINPDASTK 1586
Query: 1145 A----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
A + LE + Y F+D + LV+A TH SY+ + CYQRLEFLGDAVLDY+
Sbjct: 1587 ALDNLWQQFQFAQLEEKIGYRFKDRAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYM 1646
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
IT YL+ SPG LTD+RSA VNN +A +VK KH + L+ I V
Sbjct: 1647 ITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIEKFVKL 1706
Query: 1261 FEKLSLGSTFGWE--SVTS-------------FPKALGDIIESLAGAIFVDSGCNREVVF 1305
S + F E VT+ PKALGD+ ES+AGAI++DSG N + +
Sbjct: 1707 CGDRSFDTNFNTEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTW 1766
Query: 1306 QSIRPLLEPMI------TPETMRFHPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEV 1358
Q I L++ I P + P+REL E K FS + + SGK VTV+V
Sbjct: 1767 QVIYHLMKGTIETCCANPPRS----PIRELMELEGTKARFSKMERILE--SGKVRVTVDV 1820
Query: 1359 QANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
N R T + + + AK A K LK L
Sbjct: 1821 GNNMRF---TGMGRNYRIAKATAAKRALKYL 1848
>gi|171690380|ref|XP_001910115.1| hypothetical protein [Podospora anserina S mat+]
gi|170945138|emb|CAP71249.1| unnamed protein product [Podospora anserina S mat+]
Length = 1568
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 186/655 (28%), Positives = 305/655 (46%), Gaps = 76/655 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQLE E A QNTI L+TGSGKTLIA +LLR + +A FLV K
Sbjct: 125 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELENRFQGQPKRIAFFLVDK 184
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDM----GVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
V LV QQ + + D V K+ G M +FW+ T++E M+ +V T +IL
Sbjct: 185 VALVFQQHAVLTCNLDYSVAKFCGQMLDRSSAEFWE-TTFQENMA----IVCTSEILYQC 239
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L SY +++ I +LI DECHH + H YA I+ +FY + + PRI GMTASP+ +
Sbjct: 240 LHHSYIRMDQINLLIFDECHHTKKNHPYARIIKDFY--IQNEDNEARPRILGMTASPVDA 297
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
++ D +LE L++S++ T + +++ + I + +YD P T L
Sbjct: 298 QI-----DPRIAAAELEGLLHSQIATVSDPTIIQHTISCPKEEI-VLEYDRRPRQWTTPL 351
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
+ + H + V +T +ELG W A +
Sbjct: 352 HQSIKALVGNHDY-------------FTKAFVFTSQAT-----AELGPWCADR------- 386
Query: 314 YESDFFAWE---QLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN---LDSGL 367
Y FF E +L+ E + + G+ + + + + +F LD+ L
Sbjct: 387 YWQLFFNQEDIAKLETQAERSLLRQGAFSQLMGLDKNRVREAHELVKNHEFEQPILDTRL 446
Query: 368 LTEKIVCLIESLLEYRGVEDI--RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG- 424
+ K++ L ++L + +D+ RCI+FV++ TA +L LL + + + + G
Sbjct: 447 FSSKVIELWKTLHDQFSSQDLVRRCIVFVKQRNTANILVDLLKQPELKIPGLEPGILIGG 506
Query: 425 --NNSGIQCQSRKKQNEIVE--EFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
N+S + +++++ +F++G +N I ATS+ EEGLD+ CN++I FD T+
Sbjct: 507 GRNDSSWESSKTSYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNIIIRFDLYDTLI 566
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
+IQSRGRAR + S Y+ M++ G+S +++ S + +RK A L +
Sbjct: 567 QYIQSRGRARQEKSTYIHMIERGNSEQLQKMKQLKQSEDGLRK--FCEAMPDTRKLTGNN 624
Query: 541 YGEDF----------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
+ D+ Y V TG S+ + + S LP TP++ +N G
Sbjct: 625 FKMDYFLRKEKGQRQYTVPETGAKLNYKQSLICLANFVSSLPHPPETNLTPEYTVNTTEG 684
Query: 591 --ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIV 641
C + LP PI++ I + G+ K +A E C +L + L +L P +
Sbjct: 685 GFQCEVILPAISPIRSAIGKVHGSKAVAKCSAAFEMCLQLVRGNYLDTHLRPTLT 739
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 189/436 (43%), Gaps = 74/436 (16%)
Query: 923 LPPELCRIIMAPISLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNV 974
L P+ C +++ P+ +S Y+F P I+HR+ S L+A++ NML +
Sbjct: 1011 LEPKQCFLVLEPLKISPLPVQVVAMAYNF---PVIIHRVDSNLVALDACNML------GL 1061
Query: 975 TIPTIKVLEAITTKKCQED--------------FHLESLETLGDSFLKYAASQQLFKTYQ 1020
I LEA T D + E LE LGD+FLK A + ++
Sbjct: 1062 NIRPDLALEAFTKDSDNTDEQDVEQVNFQRGMGNNYERLEFLGDAFLKMATTIAIYTLIP 1121
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL 1080
+ E V++ +I N L E KL +IR+ +F+ + W G +L
Sbjct: 1122 DKDEFEYHVERMVLICNRNLFNNALEVKLEEYIRSMAFNRRTWYPEGL----------TL 1171
Query: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE----NVGLIFLDRI--------GI 1128
G++ + + + K++ADV EA+IGA T E ++ + + R+
Sbjct: 1172 KRGKRKDIRKKHVLADKSIADVCEAIIGAAYLTAQEAGNFDMAIQAVTRMVNDKNHTMQT 1231
Query: 1129 KVDFVNVPYQRQFQVHAERLVNVRHLESL---LNYSFRDPSLLVEALTHGSY--MLPEIP 1183
D+ V + +Q V E + Y F+ P LL A H +Y ++P
Sbjct: 1232 WSDYYAVYKKPAWQTMPTNSVQEDMAEKFHKRMGYRFQYPRLLRSAFQHPTYPTSWEKLP 1291
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
YQRLEFLGDA+LD +L++++PG P +LT+ + A V+N +V G H+ +
Sbjct: 1292 -SYQRLEFLGDALLDMACIDHLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYIGFHRSL 1350
Query: 1244 LHASHELYKRINITVDSFEKLSLG------------STFG---WESVTSFPKALGDIIES 1288
H+S + I V E+ S F W + PK L D IE+
Sbjct: 1351 QHSSPAVQSEIASYVTEIEEALAAAKAAAVQEGKSESNFARDFWVDCSRPPKCLPDTIEA 1410
Query: 1289 LAGAIFVDSGCNREVV 1304
GAIFVDS + + V
Sbjct: 1411 YVGAIFVDSSYDYQTV 1426
>gi|80979129|gb|ABB54767.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/687 (25%), Positives = 305/687 (44%), Gaps = 86/687 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y GD GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQXVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 520
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + SS++ L++ YC +P+
Sbjct: 521 HAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 580
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P +E G C ++ LP N ++ I ++K K +
Sbjct: 581 DAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVS 640
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEK 644
A +ACK L+Q+G L + LP + E+
Sbjct: 641 AAFKACKLLYQLGELNERFLPITLKER 667
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAXMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNXFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 NITVDSFE-----------------KLSLGSTFGWESVTSFPK-------------ALGD 1284
I ++ + K +L S E PK ALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
Length = 1495
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 311/663 (46%), Gaps = 75/663 (11%)
Query: 13 EVSADTLPFARNYQLEALENALKQNTIVFLETG--SGKTLIAIMLLRSYAYL------LR 64
E S D P R YQ+E E A ++N IV L TG SGKTLI+I+LL+ Y + L
Sbjct: 64 EASTDITP--REYQIELFEAAKEKNLIVVLPTGTGSGKTLISILLLKYYIRIEVESRALG 121
Query: 65 KPSPFVAVFLVPKVVLVPQQAEAIKMHT-DLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
P VA FLV KV L QQ +K + + GD D W ++ S ++V+
Sbjct: 122 NPRK-VAFFLVEKVALCEQQYRFLKDQIFGHNIVMFTGDNRGVTKDKKYWDDQFSSNKVV 180
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI 183
V T ILLD L + ++ I +LI DE HHA+ KH YA I+ +Y+ T + PRI
Sbjct: 181 VCTAHILLDCLNNGFITMDQINLLIFDEAHHAKKKHDYAQIVRRYYY---STEKNKRPRI 237
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD 243
GMTASP+ SK D + +LE ++S++ T S+ ++ F + KY+
Sbjct: 238 LGMTASPVDSKAG----DVAELALELEKTLDSEIATL-SDKMMRQATDFQVHVEETVKYN 292
Query: 244 E--IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGV 301
+P T L D ++ + ++ +LD K+ S I LG
Sbjct: 293 TLGLPDETKTQLWDSISKLVSRNKEFKASLDFT--------KEASTI----------LGP 334
Query: 302 WLALKAAET-ISCYESDFFAWEQLDGF---GETIIKKFGSDASQAL--VTYVPSGAEWSI 355
W A + + I E A F GE ++ + G A +A+ V V + E+
Sbjct: 335 WCADRYWQVLIDDTEIKRLADRTRMAFFGGGEKLLAR-GDQAEEAVREVQKVVAAHEF-- 391
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI-RCIIFVERVITAIVLQSLLSELLPRH 414
+ S L+ K+ CL E L+ V++ RCI+FV++ TA +L L ++
Sbjct: 392 ---RAISPQSQELSAKVKCLHEILVHAFTVDNTKRCIVFVDQRHTACLLSDLYDQVSMAI 448
Query: 415 CTWKTKYIAGNNSG---IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
Y+ G S + S +KQ ++ FR G++N + ATS+ EEG+D+ SC+LVI
Sbjct: 449 PGMNASYMIGQQSSSSTLGNMSLRKQCSTLKNFRDGVINCLFATSVAEEGIDIPSCDLVI 508
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL 531
FD +V ++QS+GRAR ++S Y+ M++ G+ L+ +R+ L +
Sbjct: 509 RFDLYTSVIQYVQSKGRARHESSRYITMLEDGNMRQIRSLKQAARDATALREFCL---RI 565
Query: 532 PCS-PLNNHMYGED-----------FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
P L + ++ E+ Y +ESTG T SS+ ++ + + L +
Sbjct: 566 PADRKLQDDVFDEETESQIKQIRFNVYKIESTGAQLTFPSSLEILARFVASLGTAESSHS 625
Query: 580 TPKFHINKEMGICT--LYLPNNCPI--QTVIAQGNIKTLKQAACLEACKKLHQIGALTDN 635
++H+ K T + LP++ PI QT Q + K +A E CKKL + D+
Sbjct: 626 KAEYHVYKVGTYFTAAVNLPSSSPIVSQTGYPQRSKLLAKCSAAFEVCKKLINGKHIDDH 685
Query: 636 LLP 638
L P
Sbjct: 686 LQP 688
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 210/469 (44%), Gaps = 77/469 (16%)
Query: 928 CRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIK 980
C +I+ P+++S + F P+I+HR+ S L+A LD C + +++IP
Sbjct: 957 CFVILEPLNVSPLPIDVVSMALKF-PAIIHRIDSALIA-------LDACELFDLSIPPAL 1008
Query: 981 VLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGL 1026
LEA+T + H E LE LGDSFLK A + +F ++E L
Sbjct: 1009 ALEAMTKDSDNTEDHGKQQINFQAGMGSNYERLEFLGDSFLKMATTISIFVLKPKSNECL 1068
Query: 1027 LSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKI 1086
V++ +I N L + KLP +IR+ +FD + W D +L G+
Sbjct: 1069 YHVERMLLICNNNLFNTAVDCKLPEYIRSLAFDRRTW-----------YPDLTLRKGKAF 1117
Query: 1087 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGI-KVDF------------ 1132
T R+++ K++ADV EALIGA +LS+ +N+ + + K +
Sbjct: 1118 KATARQRLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMAYDEYYAS 1177
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
VP ++ +A + V+ + Y F+ LL A TH SY YQRLEFL
Sbjct: 1178 FKVPDWQKASPNANQRRLVQKVADATGYHFKSAPLLQSAFTHPSYAYSGNVPNYQRLEFL 1237
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDA++D I YLY +P P +LT+ + A +N VK LH H+L + +
Sbjct: 1238 GDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQFIS 1297
Query: 1253 RINITVDSFEKLSLGSTFG---------------WESVTSFPKALGDIIESLAGAIFVDS 1297
+I D +L L W + T+ PKA D IE+L GA+FVDS
Sbjct: 1298 KIR---DYVAELELAEETARQEAEEDGTPMRMDFWLNATTPPKAYADSIEALMGAMFVDS 1354
Query: 1298 GCNREVV----FQSIRPLLEPMITPETM-RFHPVRELTEYCQKNHFSMK 1341
+ VV + I P + M +T HP LT+ Q+ MK
Sbjct: 1355 EFDYSVVEDFFTKFIFPYFKDMSLYDTFANKHPYTFLTKKMQQEIGCMK 1403
>gi|195487840|ref|XP_002092062.1| Dcr-2 [Drosophila yakuba]
gi|194178163|gb|EDW91774.1| Dcr-2 [Drosophila yakuba]
Length = 1730
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/687 (25%), Positives = 305/687 (44%), Gaps = 86/687 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 13 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 72
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y GD GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 73 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 132
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 133 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 186
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 187 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 237
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 238 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 297
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 298 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 357
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 358 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 411
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 412 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 471
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 472 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 531
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + SS++ L++ YC +P+
Sbjct: 532 HAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 591
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P +E G C ++ LP N ++ I ++K K +
Sbjct: 592 DAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVS 651
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEK 644
A +ACK L+Q+G L + LP + E+
Sbjct: 652 AAFKACKLLYQLGELNERFLPITLKER 678
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1203 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1262
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1263 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1322
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1323 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1382
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1383 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1442
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1443 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1502
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1503 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1562
Query: 1255 NITVDSFE-----------------KLSLGSTFGWESVTSFPK-------------ALGD 1284
I ++ + K +L S E PK ALGD
Sbjct: 1563 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1622
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1623 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1675
>gi|80979127|gb|ABB54766.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/687 (25%), Positives = 305/687 (44%), Gaps = 86/687 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y GD GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 520
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + SS++ L++ YC +P+
Sbjct: 521 HAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 580
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P +E G C ++ LP N ++ I ++K K +
Sbjct: 581 DAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVS 640
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEK 644
A +ACK L+Q+G L + LP + E+
Sbjct: 641 AAFKACKLLYQLGELNERFLPITLKER 667
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 NITVDSFE-----------------KLSLGSTFGWESVTSFPK-------------ALGD 1284
I ++ + K +L S E PK ALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNEPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|195584278|ref|XP_002081941.1| Dcr-2 [Drosophila simulans]
gi|194193950|gb|EDX07526.1| Dcr-2 [Drosophila simulans]
Length = 1666
Score = 211 bits (536), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 178/685 (25%), Positives = 312/685 (45%), Gaps = 83/685 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL ++ K+N IV+L TGSGKT +AI++L+ ++ L KP A+F+ V
Sbjct: 20 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 79
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA A++ +T+ KVG Y G+ GVD W W +E+ ++VLV T Q+ LD +
Sbjct: 80 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 139
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLPRIFGMTASPIK----SK 194
LN I V+I+DECHH H + M RL D +NLPR+ G+T IK SK
Sbjct: 140 ALNSISVVIIDECHHGTRHHPFREFM-----RLFTIADQTNLPRVVGLTGVLIKGNEISK 194
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST----AKFKFYKYDEIPHALY 250
V++ K+ +LE + T + + N + ++T A F ++ P
Sbjct: 195 VAT-------KLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVER 247
Query: 251 THLAD--------ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+A EL I ++ R ++L ++ + V ++ + +Y L E G++
Sbjct: 248 FIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSK--KGFVKQMFNDFVYQLQEYGIY 305
Query: 303 LA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
A + AET+S A + +++K
Sbjct: 306 AASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPDDD 365
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
E I + S + L++ K+ ++ +DI C++FVER T + LL
Sbjct: 366 VNTEDIIMNFSTPKIQRFLMSLKVS------FAHKDPKDICCLVFVERRYTCKCIYGLLL 419
Query: 409 ELLPRHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
+ + +++ G NS RK Q +++FR G N+++ +S+LEE
Sbjct: 420 NYINSTPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEE 479
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGN 519
G+DVQ+CN V + DP +T ++Q++GRAR + +++ D T ++ Y + +
Sbjct: 480 GIDVQACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHD 539
Query: 520 K----MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++ VL A + H G + S++++L++ YC +P+D
Sbjct: 540 EIAEYLKERVLEEAMPELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 599
Query: 576 YFKPTPKFHI------NKEMG-------ICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
+ P ++ NK G + ++ +P NC ++ I N + K +A
Sbjct: 600 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 659
Query: 620 LEACKKLHQIGALTDNLLPDIVVEK 644
+AC L+ +G L++ LP + E+
Sbjct: 660 FKACLALYSLGELSEKFLPKTLKER 684
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 188/448 (41%), Gaps = 99/448 (22%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1162 LAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKLVSNRNLL 1221
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P + T F P+ W+ P + G + L D +L
Sbjct: 1222 YCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFANMIGPHNLRDLALDD 1281
Query: 1081 -------------FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 1127
+N + G + +K +AD +EAL+G + G L+
Sbjct: 1282 EESLVKGNCSDIKYNRFVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFK 1341
Query: 1128 IKVDFVNVPYQRQFQVHAER---------------LVNVRHLESLLNYSFRDPSLLVEAL 1172
I ++ P + L+N HLE L Y+F+D L++AL
Sbjct: 1342 ICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQAL 1401
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
TH SY I YQ LEF+GDA+LD+LI+ Y++ ++PG LTD+RSA VNN A
Sbjct: 1402 THPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLAC 1461
Query: 1233 SSVKHGLHKHILHASHELYKRIN------------------------------------- 1255
V+H LH IL + +L + I+
Sbjct: 1462 ICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNYVHILLEEADVQPTPLDLDDEL 1521
Query: 1256 --------ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD-SGCNR--EVV 1304
I+ ++ + + F + PK LGD++E+L AI++D R EV+
Sbjct: 1522 ELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLEALIAAIYLDCRDLQRTWEVI 1581
Query: 1305 FQSIRPLLEPMITPETMRFHPVRELTEY 1332
F+ P L+ M +P+R+L E+
Sbjct: 1582 FRLFEPELQEFT--RNMPINPIRQLIEH 1607
>gi|326481629|gb|EGE05639.1| hypothetical protein TEQG_04648 [Trichophyton equinum CBS 127.97]
Length = 1519
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 188/655 (28%), Positives = 306/655 (46%), Gaps = 119/655 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--------SPFVAVFL 74
R YQLE E A ++N I LETGSGKTLIA++LL+ +++ + P ++ FL
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLK---HVIEQELTDRSLGLPPRISFFL 168
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V V LV QQA ++ + K+ K+ G M D W+ TW+ ++ V+V T ++L L
Sbjct: 169 VDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCL 228
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S+ +++ I +LI DE HHA+ +H YA I+ +FY + E P+IFGMTASP+ +K
Sbjct: 229 LHSFIQIDQINLLIFDEAHHAKKEHPYARIIKDFYLKEPERK----PKIFGMTASPVDAK 284
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTH 252
V + LE +++S++ T ++ ++L + T + Y E+P LY+
Sbjct: 285 V-----EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSK 339
Query: 253 LADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
L + I+ + +KV K + S LG W
Sbjct: 340 LRQKFGDIK-------------------VLEKVFKFSRE---TSSSLGSWC--------- 368
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP--------------SGA---EWSI 355
SD+ W E + K + +++ L+ VP +GA E
Sbjct: 369 ---SDWI-WSYC--LSEETLPKLEARSNRPLMKSVPNQSSCDTEAERIREAGAIIKEHEF 422
Query: 356 GDDSKFNLDSGLLTEKI-VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
GD + LL+ K+ + + L ++ D RCI+F + TA +L+ L ++
Sbjct: 423 GDPVA---NPELLSRKVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKI---- 475
Query: 415 CTWKTKYI----------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
++YI G+ G+ R++ ++ FR+G +N + ATS+ EEGLD+
Sbjct: 476 ---GSQYIRPNLLVGVRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAEEGLDI 531
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
Q CNL++ FD T+ +IQSRGRAR S + MV+ + ++ +E S +E
Sbjct: 532 QDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVERNNLMHETAVEEVRRS-----EE 586
Query: 525 VLSH--ASLPCSPL------NNHMYGED----FYHVESTGTIATLSSSVSLIYFYCSRLP 572
VL+ SLP L + M +D Y ++STG T SS++++ Y S L
Sbjct: 587 VLTRFCKSLPEDRLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQ 646
Query: 573 SDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEAC 623
+ + I+ + G IC LP PI+ + + + L KQ+A E C
Sbjct: 647 YEKELSTQVSYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 701
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 214/469 (45%), Gaps = 61/469 (13%)
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
++ C +P+L I +N+L + QK P + + + E +I + L+T
Sbjct: 956 MERCNWDQPVLRSELIQLRRNFLDI--DENQKSPP-VDYYVCAEALKISAISVPLAT-QI 1011
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------ 995
F F P+I+ R++S L+A L+ C + + IP LEA+T + H
Sbjct: 1012 FVF-PAIIWRMESYLIA-------LEACEKLQLKIPPELALEALTKDSENTEEHGMEQIR 1063
Query: 996 --------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGD FLK A S LF +N E VK+ +I N L
Sbjct: 1064 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIIL 1123
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTG-RKKVKSKTVADVVE 1104
++ FIR+ SF + W G +L G+ K G + KT+ADV E
Sbjct: 1124 EIFKFIRSRSFSRRAWYPEGL----------TLLKGKDKKEGPNGPEHALADKTIADVCE 1173
Query: 1105 ALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VNVPYQRQFQVHAERLV 1149
ALIGA L GG + +F++ R+ D+ ++P + A +
Sbjct: 1174 ALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASASASEID 1233
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++S L Y F+ P LL A H SY +P CYQRLEFLGD++LD + +L+
Sbjct: 1234 VANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFE 1292
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL- 1266
+YP P +LT+ + A V+N +V LH H++H S+ L +I + + + +
Sbjct: 1293 RYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQGQITSYTEELQAMKIK 1352
Query: 1267 --GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
G+ W PK L DI+E+ GAIFVDS N +VV + R ++
Sbjct: 1353 MEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVVDEFFRKFIQ 1401
>gi|80979133|gb|ABB54769.1| Dicer-2 [Drosophila teissieri]
Length = 1719
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 259/1065 (24%), Positives = 447/1065 (41%), Gaps = 184/1065 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ T+L VG Y G+ GVD W W +E+ H+VLV T Q+ LD +
Sbjct: 62 LARQQTVAVQRLTNLTVGFYVGEQGVDDWTRGQWSDEIQDHQVLVGTAQVFLDMFTQKHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + NLPR+ G+T IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNINLPRVVGLTGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ V ++ + L+ L E G
Sbjct: 227 MVTQSIQSQIQQFFVTLDLMDIGVQPVRRSKSLQCQRDPQKKSSVKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G N+ Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNTISQDFESVIERKHQKSAIQQFRDGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-----------STT 507
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D T
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 520
Query: 508 QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFY 567
+ + YL K+R VL + H + G + SS++ L++ Y
Sbjct: 521 HAEIAEYL----KLR--VLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRY 574
Query: 568 CSRLPSDGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNI 611
C +P+D + P + +E G C ++ LP N ++ I N+
Sbjct: 575 CQSMPTDAFGFVIPWINSLQEDTRKILFGDCARSKEVVSIKLPLNSKLKDTIYSDPMDNV 634
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA---------QKRGNE-----PYNA 657
K K +A + CK L+Q+G L + LP + E+ A +K G++ NA
Sbjct: 635 KAAKISAAFKTCKLLYQLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTAIVRKNA 694
Query: 658 EHPIY-----FPPELVNQSPQDTKITYHCYLIELKQHF---NYD-------ISARNIVLA 702
+ P E + P+ ++ Y Y I L+ F +Y + RN +
Sbjct: 695 PKVVRNYKTDCPAEFYDARPRVGELCY-AYEIFLEPQFESCDYTEHMYVNLRTPRNYAIL 753
Query: 703 MRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPN--QVLLCRRFQITLFRVIMDHN 760
MR +L + L +G+L V + + +I N Q+ L +F +FR ++
Sbjct: 754 MRNKLP---RLAEMPLFSNQGKLHVRVANEPLKVVIQNSEQLELLHQFHGMVFRDLL--K 808
Query: 761 LDKLNEILDGFELRDNLEIDYLLLP-----STGQLIDWKTVATV--LFPRDNGSKHNMNC 813
+ + +LD R + E YL++P + IDW V L +N S H
Sbjct: 809 IWQPFFVLD----RRSKENSYLVVPLILGADQQKCIDWPLVTKFQRLPQAENSSVHQRKQ 864
Query: 814 STM-----FNARIV-----HTKSGPLCTCKIHN-----SLVCTPHNGQIYCITGVLGHLN 858
T F +IV + + + K+H SL+ H + Y +
Sbjct: 865 QTAPRPEDFEGKIVSQWYANFEHKRMLVTKVHRELTPLSLMEKNHQDKTY-------YEF 917
Query: 859 ANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK 918
S + + G V +++++ I++ RE L + F+VQN Q K ++
Sbjct: 918 TMSKYGNHIGDVV-----HKDKFMIEV---RE--LTDQLNFYVQNRGKSSAQSK----AR 963
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
L PELC P L + F+PSI+ R+ LL A L+
Sbjct: 964 AKIILIPELCFNYEFPGDL--WLKLIFLPSILRRMHFLLHAEGLR 1006
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 147/342 (42%), Gaps = 69/342 (20%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + F +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVFDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIP------------------GDNSGSYELNDDSL-- 1080
+ +P I T F P+ W+ P G + L D +L
Sbjct: 1252 YCLSDTDIPKKISTILFTPRYTWLPPSISLPHNVLALWREKPELASMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESLVRGYCSDINYNSFVEGCRANAQSHHAGADFSAEVNFCVGLVTIADKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + +L + I
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESI 1533
>gi|195380844|ref|XP_002049171.1| GJ20897 [Drosophila virilis]
gi|194143968|gb|EDW60364.1| GJ20897 [Drosophila virilis]
Length = 1722
Score = 210 bits (534), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 193/763 (25%), Positives = 342/763 (44%), Gaps = 95/763 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
AR YQL +E ++N I++L TGSGKT +AI+ L+ +++ + + A+F+ V
Sbjct: 8 ARGYQLRLVEYITRRNGIIYLPTGSGKTYVAILALKRFSHNMDRSIEEGGQRALFICNTV 67
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
L QQA +K ++ KVG Y G+ G D W+ + W +E+ ++VLV T Q++LD +
Sbjct: 68 ELARQQAVYVKKFSNFKVGFYVGEQGTDNWNRSKWSDEIRDNQVLVGTAQVILDLFLQKH 127
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+L + + I+DECHH G H Y M F +++ S+LPR+ G+T IK +
Sbjct: 128 MELKSVSIAIIDECHHGTGSHPYHEFMRLFQ---MQSETSSLPRVVGLTGVLIK---GNE 181
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK-FYKYDEIPHALYTHLADEL 257
+ +K+ +LET + T + + N I ST + Y + + D +
Sbjct: 182 IKQLGKKLKELETTFRGNIVTVSDMKEMENVILHSTKPRECLITYKSVVQRF--EVIDNI 239
Query: 258 AMIELKHTRSLENLDLNEAQAELIR-----KKVSKINST------LLYCLSELGVWLALK 306
R+L+ +D+ + R ++ +K N+ L+ L GV+
Sbjct: 240 RCNIESFYRTLDLVDIGHQPVRMSRGMRFQREPNKKNAIKLVLNDFLFQLESYGVYAGSI 299
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD--DSKFNLD 364
A ++ +E ET+ + A L + + D D + D
Sbjct: 300 AIVSV------LVEFEIKRRQAETLSMRNMYRAVITLCESIRHALVAKLRDMLDDEEMPD 353
Query: 365 SGLLTEKIVC-----LIESLLEY-------RGVEDIRCIIFVERVITAIVLQSLLSELLP 412
L +E+++ ++S L Y + +DI C++FVER T + LL +
Sbjct: 354 DELNSEEVIMNFSTPKVQSFLHYLKKAFANKEPKDICCLVFVERRYTCKCIYGLLLNFIA 413
Query: 413 RHCTWKT----KYIAGNNSGI----QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
+ +++ G NS R+ Q +++FR G N+++ +S+LEEG+DV
Sbjct: 414 ATPELRNSLFPQFMVGRNSIFLDFESILERRWQKSAIQQFRDGEANMMICSSVLEEGIDV 473
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV------KSGDSTTQSRLENYLASG 518
Q+CN VI+ DP +T ++Q++GRAR ++S ++L K + Q R + + G
Sbjct: 474 QACNYVIILDPIKTFNMYVQTKGRARSKDSSFILFSSELEQQKISEQIHQYR-KAHAEIG 532
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
++ VL +N H E V G + SS+++L++ YC ++PSD +
Sbjct: 533 EYLKDRVLERTDPQMDEMNEHFQDEIQPFVNKNGAVLLASSALALLHRYCQQMPSDAFGI 592
Query: 579 PTPKFHI------------NKEMGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEAC 623
P F + + I ++ LP N ++ I + ++ A A +AC
Sbjct: 593 VLPWFKLLEPEEVKKFTSDWQRKHIVSITLPLNSTLREAIYSDPMPCVRWAKISAAFKAC 652
Query: 624 KKLHQIGALTDNLLPDIVVEK-------H-----------DAQKRGNEPYNAEHPIYF-- 663
KLH +G L + LP V E+ H ++R +P Y
Sbjct: 653 IKLHALGELNERFLPTTVNERVAEIANFHFDHWKKYGDDVTIKRRDRDPVKTNMKTYATK 712
Query: 664 -PPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT 705
P EL + P+ ++ Y Y I L+ + + +R+I +++T
Sbjct: 713 CPSELNDAMPRVGEVCY-AYEIILEAQYERNDYSRHIYDSLQT 754
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 208/528 (39%), Gaps = 127/528 (24%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT + F +E E LGD FLK +A+ L Y + +EG+L+ K ++SN L
Sbjct: 1197 LAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANKYPDWNEGILTQVKSTLVSNRNLL 1256
Query: 1042 KLGCEQKLPGFIRTESFDPK----------------MW---------------------- 1063
E +P I + F PK +W
Sbjct: 1257 YCLSETDIPTRICSTLFTPKYTWLPPSLGLPQNVLALWKEKPELAALVGPHNIRNLCISE 1316
Query: 1064 ----------------IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALI 1107
+ G + Y + F+ + G ++ K +AD +EAL+
Sbjct: 1317 EEVFGNGKCGEHVYRSFVDGCQANQYTHHAGMDFSSEINFCVGLVQMPDKLIADTLEALL 1376
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR--QFQVHAER-------------LVNVR 1152
G + G G L+ GI + P + Q+ + R L+N +
Sbjct: 1377 GVVVKNYGLQHGFRMLEYFGICKSDIGKPLTQLLDLQLGSARMRTNISQREVDGFLINHQ 1436
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE L Y+FRD + L++ALTH S + CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1437 HLEQNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHKTRM 1496
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHIL------------------HASHELYKRI 1254
+PG LTD+RSA VNN A V+H H IL +H + +
Sbjct: 1497 TPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLTESIQSFVQFQESQNHRVTNHV 1556
Query: 1255 NI----------TVDSFEKLSLGST------------------FGWESVTSFPKALGDII 1286
I +DS ++L L F PKALGD++
Sbjct: 1557 RILMEESDVQPEPLDSDDELELAEAAQQQKLAINGADAPHVGEFNISHNVDVPKALGDVL 1616
Query: 1287 ESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPV 1344
E+L A+++D + +Q + L EP + + +P+R+L E+ + KP
Sbjct: 1617 EALIAAVYLDCR-DLTTTWQVVYRLFEPELLEFSRNVPLNPIRQLFEH------KLAKPT 1669
Query: 1345 AS---RISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
S + + VT + + + + K AK A K L+ L
Sbjct: 1670 FSPPIMDNNQVMVTCQFICMDKTIKVYGFGNNGKQAKLSAAKHALQKL 1717
>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
Length = 1510
Score = 209 bits (533), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 200/680 (29%), Positives = 311/680 (45%), Gaps = 86/680 (12%)
Query: 9 DTTEEVSADTLPFARNYQLEALENALKQNTIVFLETG-----------------SGKTLI 51
D+ E S D P R YQ+E E A ++N IV L TG SGKTLI
Sbjct: 60 DSFAEASTDITP--REYQIELFEAAKEKNLIVVLPTGIFLSLYASTLDILIGTGSGKTLI 117
Query: 52 AIMLLRSYAYL------LRKPSPFVAVFLVPKVVLVPQQAEAIKMHT-DLKVGKYWGDMG 104
+I+LL+ Y + L P VA FLV KV L QQ +K K + GD
Sbjct: 118 SILLLKHYIRIEVESRALGNPRK-VAFFLVEKVALCEQQYRFLKDQIFGHKTVMFTGDNR 176
Query: 105 VDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACI 164
D W ++ + ++V+V T ILLD L + ++ I +LI DE HHA+ KH YA I
Sbjct: 177 GVTKDKKYWDDQFASNKVVVCTAHILLDCLNNGFITMDQINLLIFDEAHHAKKKHDYAQI 236
Query: 165 MTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASES 224
+ +Y+ T + PRI GMTASP+ SK D + +LE ++S++ T S+
Sbjct: 237 IRRYYY---STDKNKRPRILGMTASPVDSKAG----DVAELALELEKTLDSEIATL-SDK 288
Query: 225 VLSNFIPFSTAKFKFYKYDE--IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIR 282
++ F + KY IP T L D ++ + ++ +LD
Sbjct: 289 MMRQATDFQVHVEETVKYSTLGIPDETKTQLWDSISKLVSRNKEFKASLDFT-------- 340
Query: 283 KKVSKINSTLLYCLSELGVWLALKAAET-ISCYESDFFAWEQLDGF---GETIIKKFGSD 338
K+ S I LG W A + + I E A F GE ++ + G
Sbjct: 341 KEASTI----------LGPWCADRYWQVLIDDTEIKRLADRTRMAFFGGGEKLLAR-GDQ 389
Query: 339 ASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI-RCIIFVERV 397
A +A+ A G S S L+ K+ CL E L+ +++ RCI+FV++
Sbjct: 390 AEEAVREVQKVVAAHEFGTISP---QSQELSAKVKCLHEILVHAFTIDNTKRCIVFVDQR 446
Query: 398 ITAIVLQSLLSELLPRHCTWKTKYIAG---NNSGIQCQSRKKQNEIVEEFRRGLVNVIVA 454
TA +L L S++ Y+ G ++S + S +KQ ++ FR G++N + A
Sbjct: 447 HTACLLSDLYSQVSMAIPGMNASYMIGQQSSSSALGNMSLRKQCSTLKNFRDGMINCLFA 506
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
TS+ EEG+D+ SC+LVI FD +V ++QS+GRAR ++S Y+ M++ G+ L+
Sbjct: 507 TSVAEEGIDIPSCDLVIRFDLYTSVIQYVQSKGRARHESSRYITMLEDGNMRQIRSLKQA 566
Query: 515 LASGNKMRKEVLSHASLPCS-PLNNHMYGED-----------FYHVESTGTIATLSSSVS 562
+R+ L +P L + ++ E+ Y +ESTG T SS+
Sbjct: 567 ARDATALREFCL---RIPADRKLQDDVFDEETEKQIKEIRFNVYKIESTGAQLTFPSSLE 623
Query: 563 LIYFYCSRLPSDGYFKPTPKFHINKEMGICT--LYLPNNCPI--QTVIAQGNIKTLKQAA 618
++ + + L + ++H+ K T + LP++ PI Q Q + K +A
Sbjct: 624 ILARFVASLGTAENSHSKAEYHVYKVGTYFTAAVNLPSSSPIVSQAGYPQRSKLLAKCSA 683
Query: 619 CLEACKKLHQIGALTDNLLP 638
E CKKL + D+L P
Sbjct: 684 AFEVCKKLINGKHIDDHLQP 703
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 213/476 (44%), Gaps = 77/476 (16%)
Query: 928 CRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIK 980
C +I+ P+++S + F P+I+HR+ S L+A LD C + +++IP
Sbjct: 972 CFVILEPLNVSPLPIDVVSMALKF-PAIIHRIDSALIA-------LDACELFDLSIPPAL 1023
Query: 981 VLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGL 1026
LEA+T + H E LE LGDSFLK A + +F ++E L
Sbjct: 1024 ALEAMTKDSDNTEDHGKQQINFQAGMGSNYERLEFLGDSFLKMATTISIFVLKPKSNECL 1083
Query: 1027 LSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKI 1086
V++ +I N L + KLP +IR+ +FD + W + +L G+
Sbjct: 1084 YHVERMLLICNNNLFNTAVDCKLPEYIRSLAFDRRTW-----------YPNLTLRKGKAF 1132
Query: 1087 YVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGI-KVDF------------ 1132
T R+ + K++ADV EALIGA +LS+ +N+ + + K +
Sbjct: 1133 KTTTRQCLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMAYDEYYAS 1192
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
VP ++ +A + V+ + + Y F+ LL A TH SY YQRLEFL
Sbjct: 1193 FKVPDWQKASPNANQRRLVQKVADAIGYHFKSAPLLQSAFTHPSYTYSGNVPNYQRLEFL 1252
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDA++D I YLY +P P +LT+ + A +N VK LH H+L + +
Sbjct: 1253 GDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQFIS 1312
Query: 1253 RINITVDSFEKLSLGSTFG---------------WESVTSFPKALGDIIESLAGAIFVDS 1297
+I D +L L W + T+ PKA D IE+L GA+FVDS
Sbjct: 1313 KIR---DYVAELELAEETARQEAKEDGTPMRMDFWLNATTPPKAYADSIEALIGAMFVDS 1369
Query: 1298 GCNREVV----FQSIRPLLEPMITPETM-RFHPVRELTEYCQKNHFSMKKPVASRI 1348
+ VV + I P E M +T HP LT+ Q+ M +AS +
Sbjct: 1370 EFDYSVVEDFFTKFIFPYFEDMSLYDTFANKHPYTFLTKKMQQEIGCMDFCMASTV 1425
>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
Length = 1607
Score = 209 bits (533), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 269/1065 (25%), Positives = 452/1065 (42%), Gaps = 204/1065 (19%)
Query: 6 MESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
MES ++ + DT R+YQ+E + AL +N IV+L TGSGKT IA +L++ ++ + K
Sbjct: 18 MES-PSKSCNVDTEFTPRDYQIELFQAALDENIIVYLPTGSGKTFIAALLIKEKSHEVTK 76
Query: 66 P---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
P VFLVP VVL QQA ++ HT LKV +++G MGVD W+ W E + V
Sbjct: 77 PLDSGGKRTVFLVPTVVLAIQQAAYLRRHTYLKVKEFYGSMGVDIWEKDRWNIEFDSNHV 136
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
LVMT QI +D L ++F + + +L+ DECH A M + +L S P+
Sbjct: 137 LVMTAQIFVDILNHAFFSPHQLNLLVFDECHAAVKDAP----MKQVLSKLKNCEVSQRPK 192
Query: 183 IFGMTASPIKSKVSSSE-QDYWQKI-----------HDLETLMNSKVYTCASESVLS--- 227
I G+TA+ + + + D Q++ D+ET+ S C E++L
Sbjct: 193 ILGLTAALFRMRCKPEKVPDLIQQLSETMGCVVRIPSDVETVARSSTKPC--ETILQYED 250
Query: 228 -NFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTR--SLENLDLNEAQAELIRKK 284
N P A DE+ ++ ++ + +E ++ S + D+N+ Q + I
Sbjct: 251 KNSNPNPDA-------DELSRIIFVMVSSLMQQLEQQYGEGNSKDGPDVNK-QPDKIDVL 302
Query: 285 VSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALV 344
+N + Y LS +G + A A + + F +I+K + ++
Sbjct: 303 FDALND-IDYLLSTIGPYGAFHCAHVYIRILERTKSRAKTAPFLTDLIRKQVCNGLNFII 361
Query: 345 TYV--PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIV 402
+ V P A++S D R ++FV+ A
Sbjct: 362 SEVCTPYFAKYSPVD-------------------------------RLLLFVQPRDIA-K 389
Query: 403 LQSLLSELLPRHCTWKTKYIAGNNSGIQCQS--RKKQNEIVEEFRRGLVNVIVATSILEE 460
+ L L P K AG NS ++ KQNEI++ FR GL N++VATS+LEE
Sbjct: 390 HDTTLEFLKPLFTMGKA---AGRNSSLKETQILNMKQNEIMQYFREGLCNLLVATSVLEE 446
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNK 520
G+D+ CNL+I FD +T C ++Q++GRAR + + Y ++V G+ T+S L + LA +
Sbjct: 447 GIDIPDCNLIIRFDRIKTYCDYVQTKGRARSKKAFYCILVSRGE--TESCLAD-LAQFHS 503
Query: 521 MRKEVLSHASLPCSPLN--NHMYGE---DFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ +++LS + N ++++ + + G TL SS+SLI YC +L SD
Sbjct: 504 IEQQLLSTGNFEDERDNAIDNLFSQIIPPYVPFGEDGPRITLPSSISLINRYCGQLSSDP 563
Query: 576 YFKPTPKFHINK--------------------------------EMGICTLYLPNNCPIQ 603
P+ K + C L+LP N P++
Sbjct: 564 DVSLAPQLTTKKVAESDVDPIQLQKIKDILKKLPTDASKYSSINNLFQCHLFLPLNSPLR 623
Query: 604 TVIAQGNIKT---LKQAACLEACKKLHQIGALTDN-LLP----DIVVEKHDAQKRGNEP- 654
+ + T K+A L+A KLH++ L DN L P +++ ++ + N
Sbjct: 624 DEVIGDVMPTKRLAKRAVALKASIKLHELKELDDNHLFPVPRLNVIDDESSTEDEENSAA 683
Query: 655 ----------YNAEHPIYF------PPELVNQSPQDTKITYHCYLIELKQHFNYDISARN 698
YN P+ F P + D +T C I K +F + + +
Sbjct: 684 PQLNKENIAVYNRRLPVCFSNCRPLPGQPCFVYAIDFTLTKPCLDIT-KLYFPFAVDTKL 742
Query: 699 IVLAMRTELESEIKKV-NFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
+L + I + F + G VNL + L +Q+ RF +F+ +
Sbjct: 743 AILTSKV-----IPAICPFPVVTRAGEFQVNLCGADSVILDQSQLGKLERFHQFVFQDV- 796
Query: 758 DHNLDKLNEILDGFELRDNLEIDYLLLP--STGQLIDWKTVATVLFPRDNGSKHNMNCST 815
L LD L +L+ YL++P + ID+ V
Sbjct: 797 ---LFLWKRQLDFDVLASDLQ--YLVVPLQTANDKIDFALV-----------------EN 834
Query: 816 MFNARIVHTKSGPLC-------TCKIHNSLVCTPHNGQIYCITGVLGHLNA--------- 859
M NA ++ + P + ++ +S++ + LG LNA
Sbjct: 835 MINAPAINWEKPPYAGDHFIFDSSRLIDSVIVPSYKP--------LGTLNAFYVDRVSDL 886
Query: 860 NSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL-SKCRQQKQKEPSK 918
L N TY +++ +Y + L ++ LL R +N+L ++ +++ P
Sbjct: 887 TPLTPFPNNEFKTYASYFQLKYKLTLTNQQQQLLQVSREISGKNFLVNRVASTREETP-- 944
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
L ELC + P++ S + ++P I+HRL +L+A L+
Sbjct: 945 --MHLVAELCHV--HPLAGSIWKQVVWLPCILHRLDRMLVAEELR 985
Score = 189 bits (481), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 222/456 (48%), Gaps = 64/456 (14%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNH--EGLLSVKKERIISNA 1038
+LEA+T K E F +E ET+GDS LK S ++ ++ EG LS+ + R I+N
Sbjct: 1158 ILEALTLAKTHEGFDMERSETIGDSILKLVISIYVYGETGSDRCDEGRLSLMRMRQINNK 1217
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
L KLG ++ + F + F+ +P + + D I ++ V K
Sbjct: 1218 HLFKLGAKKDIGEFTVAQRFELMANFLPPGFKTPTDPDTD-------INAHVQQYVLMKN 1270
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------------DFVNVP--------- 1136
VAD +EALIG +L+T G + +D +G+K F +P
Sbjct: 1271 VADCMEALIGVYLTTTGIKGAIKLMDWMGLKTVPRLEIATFNEMNGFPILPSTFGSSTLN 1330
Query: 1137 ---YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1193
+ Q + ++ + E L Y+F++ +LL+EALTH SY+ I CYQRLEFLG
Sbjct: 1331 DTQLKDQEEALSQLFAGLESFEKRLRYTFKNKALLIEALTHASYIPNRITNCYQRLEFLG 1390
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
DAVLDYL+T Y Y+ +P LTD+RSA VNN+ +A+ +V++ H ++ H S L
Sbjct: 1391 DAVLDYLVTRYYYDNPCQYTPAILTDLRSAMVNNETFAVMAVQNRFHLYLKHLSLSL--- 1447
Query: 1254 INITVDSFEK-------LSLGSTFGWESVT----------SFPKALGDIIESLAGAIFVD 1296
N+ +D F + L + + F E + PK LGDI ES+AGAIFVD
Sbjct: 1448 -NVILDRFVRSQEENGHLLMHNYFVLEETSEPHQSLASNIDVPKVLGDIFESVAGAIFVD 1506
Query: 1297 SGCNREVVFQSIRPLLEPMITP--ETMRFHPVRELTE-YCQKNHFSMKKPVASRISGKAA 1353
SG + + V++S P L + E + +R L E Y F + +A G+
Sbjct: 1507 SGMSLDAVWKSYLPFLHDALEKFNEKIPISALRVLHERYPNALKFRKSESLA---DGRLC 1563
Query: 1354 VTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
V +E+Q R+F+ + KTAK A K L L
Sbjct: 1564 VAIEIQGT-RVFKGA--GGNSKTAKSAAAKYALSVL 1596
>gi|80979125|gb|ABB54765.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 209 bits (533), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 172/687 (25%), Positives = 304/687 (44%), Gaps = 86/687 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y G GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGXQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDIXCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 520
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + SS++ L++ YC +P+
Sbjct: 521 HAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 580
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P +E G C ++ LP N ++ I ++K K +
Sbjct: 581 DAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVS 640
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEK 644
A +ACK L+Q+G L + LP + E+
Sbjct: 641 AAFKACKLLYQLGELNERFLPITLKER 667
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 NITVDSFE-----------------KLSLGSTFGWESVTSFPK-------------ALGD 1284
I ++ + K +L S E PK ALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|80979123|gb|ABB54764.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 172/687 (25%), Positives = 305/687 (44%), Gaps = 86/687 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y G+ GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGEQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 520
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + SS++ L++ YC +P+
Sbjct: 521 HAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 580
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P +E G C ++ LP N ++ I ++K K +
Sbjct: 581 DAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVS 640
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEK 644
A +ACK L+Q+G L + LP + E+
Sbjct: 641 AAFKACKLLYQLGELNERFLPITLKER 667
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 193/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 NITVDSFE-----------------KLSLGS-------------TFGWESVTSFPKALGD 1284
I ++ + K +L S F + PKALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGBFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|80979121|gb|ABB54763.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 172/687 (25%), Positives = 305/687 (44%), Gaps = 86/687 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQL +++ K N IV+L TGSGKT +A++ L+ ++ + K A+F+ V
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ A++ HT+L VG Y G+ GVD W W +E+ H+VLV T Q+ LD S+
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGEQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ + V+I+DECHH G H Y M F L + LPR+ G++ IK +
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLF---LCAEKNKALPRVVGLSGVLIK---GNEI 175
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
+ +K+ +LE + T + + N + +ST ++ L T+ + E
Sbjct: 176 KQVVKKLKELEITYRGNIITVSDTEEMENVMLYSTKPKEY---------LITYPSQERVF 226
Query: 260 I-----ELKHTRSLENLDLNEAQAELIRK--------------KVSKINSTLLYCLSELG 300
+ + + + LDL + + +R+ + ++ + L+ L E G
Sbjct: 227 LVTQSIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYG 286
Query: 301 VW--------------LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTY 346
++ L + AET+S A + +++K +
Sbjct: 287 IYAASIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPD 346
Query: 347 VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSL 406
E I S + ++ + +++ + +DI C++FVER T + L
Sbjct: 347 DKVNTEEVILSFSTPKV------QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGL 400
Query: 407 LSELLPRHCTWKT----KYIAGNNSGIQ----CQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + +++ G NS Q RK Q +++FR G N+++ +S+L
Sbjct: 401 LLNFIDSTPELRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVL 460
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLAS 517
EEG+DVQ+CN V++ DP +T ++Q++GRAR N+ ++L D S ++ Y +
Sbjct: 461 EEGIDVQACNYVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTA 520
Query: 518 ----GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
++ VL + H + G + SS++ L++ YC +P+
Sbjct: 521 HAEIAEYLKDRVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPT 580
Query: 574 DGYFKPTPKFHINKE------MGIC-------TLYLPNNCPIQTVI---AQGNIKTLKQA 617
D + P +E G C ++ LP N ++ I ++K K +
Sbjct: 581 DAFGFVIPWISSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVS 640
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEK 644
A +ACK L+Q+G L + LP + E+
Sbjct: 641 AAFKACKLLYQLGELNERFLPITLKER 667
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 192/475 (40%), Gaps = 122/475 (25%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT+ + + +E LE LGDSFLK +A+ L Y + +EG L+ K +++SN L
Sbjct: 1192 LAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNLL 1251
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG------------DNS------GSYELNDDSL-- 1080
+ +P I T F P+ W+ P +N G + L D +L
Sbjct: 1252 YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALGE 1311
Query: 1081 ---------------------------------FNGRKIYVTGRKKVKSKTVADVVEALI 1107
F+ + G + K +AD +EAL+
Sbjct: 1312 EESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEALL 1371
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---------------LVNVR 1152
G + G L+ I + P + + L+N
Sbjct: 1372 GVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFLINHH 1431
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
HLE+ L Y+F+D L++ALTH S+ I CYQ LEF+GDA+LD+LI+ Y++ +
Sbjct: 1432 HLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIFENNTKM 1491
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS------------------HELYKRI 1254
+PG LTD+RSA VNN A V+H LH IL + H + +
Sbjct: 1492 NPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRHRVTNHV 1551
Query: 1255 NITVDSFE-----------------KLSLGSTFGWESVTSFPK-------------ALGD 1284
I ++ + K +L S E PK ALGD
Sbjct: 1552 RILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGD 1611
Query: 1285 IIESLAGAIFVD-SGCNR--EVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++E+L AI++D R EV+F +P LE + + +R+LTE+ N
Sbjct: 1612 VLEALIAAIYLDCRDLQRTWEVIFNLFKPELEEFT--RNVPINAIRQLTEHKHAN 1664
>gi|326472405|gb|EGD96414.1| dicer [Trichophyton tonsurans CBS 112818]
Length = 1519
Score = 209 bits (532), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 188/655 (28%), Positives = 305/655 (46%), Gaps = 119/655 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--------SPFVAVFL 74
R YQLE E A ++N I LETGSGKTLIA++LL+ +++ + P + FL
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLK---HVIEQELTDRSLGLPPRFSFFL 168
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V V LV QQA ++ + K+ K+ G M D W+ TW+ ++ V+V T ++L L
Sbjct: 169 VDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCL 228
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S+ +++ I +LI DE HHA+ +H YA I+ +FY + E P+IFGMTASP+ +K
Sbjct: 229 LHSFIQIDQINLLIFDEAHHAKKEHPYARIIKDFYLKEPERK----PKIFGMTASPVDAK 284
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTH 252
V + LE +++S++ T ++ ++L + T + Y E+P LY+
Sbjct: 285 V-----EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSK 339
Query: 253 LADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
L + I+ + +KV K + S LG W
Sbjct: 340 LRQKFGDIK-------------------VLEKVFKFSRE---TSSSLGSWC--------- 368
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP--------------SGA---EWSI 355
SD+ W E + K + +++ L+ VP +GA E
Sbjct: 369 ---SDWI-WSYC--LSEETLPKLEARSNRPLMKSVPNQSSCDTEAERIREAGAIIKEHEF 422
Query: 356 GDDSKFNLDSGLLTEKI-VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
GD + LL+ K+ + + L ++ D RCI+F + TA +L+ L ++
Sbjct: 423 GDPVA---NPELLSRKVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKI---- 475
Query: 415 CTWKTKYI----------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
++YI G+ G+ R++ ++ FR+G +N + ATS+ EEGLD+
Sbjct: 476 ---GSQYIRPNLLVGVRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAEEGLDI 531
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
Q CNL++ FD T+ +IQSRGRAR S + MV+ + ++ +E S +E
Sbjct: 532 QDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVERNNLMHETAVEEVRRS-----EE 586
Query: 525 VLSH--ASLPCSPL------NNHMYGED----FYHVESTGTIATLSSSVSLIYFYCSRLP 572
VL+ SLP L + M +D Y ++STG T SS++++ Y S L
Sbjct: 587 VLTRFCKSLPEDRLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQ 646
Query: 573 SDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEAC 623
+ + I+ + G IC LP PI+ + + + L KQ+A E C
Sbjct: 647 YEKELSTQVSYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 701
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 214/469 (45%), Gaps = 61/469 (13%)
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
++ C +P+L I +N+L + QK P + + + E +I + L+T
Sbjct: 956 MERCNWDQPVLRSELIQLRRNFLDI--DENQKSPP-VDYYVCAEALKISAISVPLAT-QI 1011
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------ 995
F F P+I+ R++S L+A L+ C + + IP LEA+T + H
Sbjct: 1012 FVF-PAIIWRMESYLIA-------LEACEKLQLKIPPELALEALTKDSENTEEHGMEQIR 1063
Query: 996 --------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGD FLK A S LF +N E VK+ +I N L
Sbjct: 1064 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIIL 1123
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTG-RKKVKSKTVADVVE 1104
++ FIR+ SF + W G +L G+ K G + KT+ADV E
Sbjct: 1124 EIFKFIRSRSFSRRAWYPEGL----------TLLKGKDKKEGPNGPEHALADKTIADVCE 1173
Query: 1105 ALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VNVPYQRQFQVHAERLV 1149
ALIGA L GG + +F++ R+ D+ ++P + A +
Sbjct: 1174 ALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASASASEID 1233
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++S L Y F+ P LL A H SY +P CYQRLEFLGD++LD + +L+
Sbjct: 1234 VANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFE 1292
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL- 1266
+YP P +LT+ + A V+N +V LH H++H S+ L +I + + + +
Sbjct: 1293 RYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQGQITSYTEELQAMKIK 1352
Query: 1267 --GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
G+ W PK L DI+E+ GAIFVDS N +VV + R ++
Sbjct: 1353 MEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVVDEFFRKFIQ 1401
>gi|391328911|ref|XP_003738926.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1347
Score = 209 bits (532), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 182/661 (27%), Positives = 303/661 (45%), Gaps = 102/661 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
AR++QLE E A+KQN I+ L TG+GKTL++ +L++ + R+ +VFL P V
Sbjct: 26 ARHFQLELFELAVKQNVIICLGTGTGKTLVSALLIKELLHQTRERLENGGRRSVFLAPTV 85
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQ +K H + V + G M VD W G W +E +H VLVMTP IL + L ++
Sbjct: 86 PLVQQQTAYLKRHLNASVASFVGAMRVDDWTGTQWWQEFDQHNVLVMTPTILNNILNANF 145
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+ I +LI DECH A GK Y IM Y + T ++ PRI G+TAS + +V +S
Sbjct: 146 VSMANINLLIFDECHCATGKDPYVQIMQNHY---MSTHPTSRPRILGLTASVLNKRVKTS 202
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE----IPHALYTHLA 254
E +I +LE + + + T S + K+ +E PH T
Sbjct: 203 EM--MDRIEELECKLGANLVTAF--SAVDYITRPREIIVKYAHRNERSLVTPHPKATAWV 258
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI-SC 313
+E+ L L E+IR+K+ ++N+ + LSE+ L+ A+ +
Sbjct: 259 NEM----LAAVGPFGCL-------EVIRRKIRQLNNMI---LSEIAAEHRLREAKELRQA 304
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIV 373
YE E I +G+ A +EK
Sbjct: 305 YE-----------IAERTICSWGAPLEDA--------------------------SEKAW 327
Query: 374 CLIESLLEYRGVEDIRC-IIFVERVITAIVLQSLLSELLPRHC-TW---KTKYIAGNNSG 428
L+ L +R VE+ C I+F T L S + E++ ++ W + ++ G +
Sbjct: 328 KLMNVLEAFRTVEEELCGIVFTVERSTVFALCSWIKEMIKKYPERWGFLRCDFVIGQHGM 387
Query: 429 I-------------QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
S + Q ++++FR+ +N+++ATS++EEG+D+ +CNLV+ +DP
Sbjct: 388 TLYGPEYSESFQVPDSDSIRHQERVLQDFRKRQLNLLIATSVIEEGVDIPACNLVLRYDP 447
Query: 476 SRTVCSFIQSRGRARMQNSDYLLM--VKSGDSTTQSRLENYLASGNKMRKEVLSHAS-LP 532
+ + S++QSRGRAR S YLL VK+ Q + +R H + +
Sbjct: 448 PKNMRSYVQSRGRARGNPSMYLLFADVKAAPVIHQDIFQFKNIEFQLLRYCNAHHRTPIE 507
Query: 533 CSPLNNHMYGE----DFY---HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
S + H+Y + Y H + + T ++ ++ +YC L SD Y P +
Sbjct: 508 SSQMFLHLYNRSHLSNIYSKVHPNNCRAMITPFAARQILQWYCDSLGSDRYTLQKPDYVY 567
Query: 586 N-----KEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLL 637
++ C ++LP P+Q ++ + + T + +A + +L+ +G LT++LL
Sbjct: 568 ETAASPSKLVRCGIHLPRQSPLQMIVYGAWEESSLTARTSAAINVLSRLYSLGELTEHLL 627
Query: 638 P 638
P
Sbjct: 628 P 628
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 182/356 (51%), Gaps = 37/356 (10%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + E LE +GDSFLK A + ++ +++EG L+ ++ RIISN +L
Sbjct: 987 ILKALTPLYITDIVDSERLEVIGDSFLKIAVTLHFYQELISSNEGELTTRRCRIISNMSL 1046
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR----KIYVTGRKK--V 1094
+ + + + F ++ +P G+ E +L +GR + R+
Sbjct: 1047 LQHAVPKGIHEMVECVKFRVRVNFVP---PGAQE---RALLSGRCLKADVAEMSRRSQYY 1100
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------DFVNV-------PYQRQF 1141
KSK AD VEALIG +L G L +L + I + DF++ P +
Sbjct: 1101 KSKMCADSVEALIGVYLEKCGPVGALEYLRWLDIPLGRYNEGDFLDRFELPLPEPLREDK 1160
Query: 1142 QVHAERLVN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
+ ER + ++ L Y F++ L++EA+TH SY + R Y+RLEFLGDAV+DYL
Sbjct: 1161 KADVERWRKEILTVQETLGYIFQNELLVLEAITHKSYRYNRLTRSYERLEFLGDAVIDYL 1220
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
I+ Y+Y L+PG LTD+R++ V+N+ +A V + LH + H S L K N V+
Sbjct: 1221 ISKYIYTADSDLNPGQLTDVRASLVSNNTFAAIIVDNKLHTVMQHHSPLLLKLTNRFVEY 1280
Query: 1261 FEKLS----LGSTFGWESV-------TSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
E L G E PK LGD++ESL GA+F+DSG + +VV+
Sbjct: 1281 RETEKRIDILAHMMGEEDEDLEDLEQVDIPKPLGDLMESLMGAVFLDSGKDLDVVW 1336
>gi|302318908|ref|NP_001180543.1| dicer-2 [Bombyx mori]
gi|300669733|dbj|BAJ11655.1| DICER-2 [Bombyx mori]
Length = 1677
Score = 209 bits (532), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 277/1059 (26%), Positives = 450/1059 (42%), Gaps = 162/1059 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKV 78
AR YQ E A +NTI+ L TGSGKT IA L++ + L+KP + FLV V
Sbjct: 14 ARPYQAILEEIASSKNTIIHLPTGSGKTFIAQRLIKKFRNQLKKPWGEGGKRSFFLVNTV 73
Query: 79 VLVPQQAEAIKMHTDLK-VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
LV QQ I+M + VG Y + GVD+W A W E+++++V+VMT QIL D L +
Sbjct: 74 PLVNQQKNVIEMMCPVDGVGAYSSEDGVDYWKKADWDSELARNQVIVMTSQILSDMLTHA 133
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y ++ I ++I DECHHA H IM F L PR+ G+TA+ + VS
Sbjct: 134 YIRIEDINLIIFDECHHAVEDHPMRVIMKHF----LNCKAHEQPRVLGLTATLLNGNVSI 189
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH---------A 248
S+ + L+ L N+ T A+ L + +ST +F +Y P +
Sbjct: 190 SKIE-----ETLKQLENTFHATIATVDDLGEVMTYSTNPQEFIQYFRKPQMSEAAKEAIS 244
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAEL------IRKKVSKINSTLLYCLSELGVW 302
L L + + ++L + ++ Q ++ I K V + ++ L E+G++
Sbjct: 245 LLNTLQNLVMSVKLPVSLPSKDFKKTPCQRDISNDPNKIVKAVKNLIVGMITNLEEMGLY 304
Query: 303 ---LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
L + A + + ++ + T+I ++A L+ E G D
Sbjct: 305 GGSLGILAYIVLLERLKRKASTKEENLLYSTVITH-STEARMILL----DAMENETGYDK 359
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGV---------------EDIRCIIFVERVITAIVLQ 404
S EKI+ LI+ L EY + + + IIF ++ T+ +L
Sbjct: 360 IIKHSS----EKILQLIDLLKEYNPLILEKPGELLKVNHSRKPLCGIIFTKQRFTSKILY 415
Query: 405 SLLSEL---LPRHCTW-KTKYIAG------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVA 454
++L +L P + K ++ G ++ + +K + + F G +N +++
Sbjct: 416 NILMDLKKARPDEFEFLKHDFVVGFSINPFKSTREEHYLKKSSQKAILGFNNGDLNCLIS 475
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
TS++EEGLD+ C LV+ +D S+IQS+GRAR + ++++V D QS L Y
Sbjct: 476 TSVIEEGLDIPQCALVVRYDAPTEYRSYIQSKGRARSSEASFVILVDIEDK--QSFLIKY 533
Query: 515 LA---SGNKMRKEVL---SHASLPCSPLNNHMYGEDFY--HVESTGTIATLSSSVSLIYF 566
A + ++R ++ S A+ ++ ++Y +D + S G I S++SL+
Sbjct: 534 DAFQKTEERIRNLIVGDDSRAAPTTQDIHENLYDDDEVPPYETSNGNILYSVSAISLLSR 593
Query: 567 YCSRLPSDGYFKPTP----KFHINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAAC 619
YCS LP D + TP + N T+ LP P++ I N KT K++A
Sbjct: 594 YCSILPHDQFTTITPVWLQEVVENGAKKQVTVILPIGSPVKEEIKGDPYSNTKTAKRSAA 653
Query: 620 LEACKKLHQIGALTD-NLLPDIVVE-----------------------KHDAQKRGNEPY 655
L+AC KLH++G L LLP E K + K G++
Sbjct: 654 LKACIKLHELGELHPLTLLPYKYAEVDYERDDIRGCFPNWTKDCETEIKENVPKPGSKKR 713
Query: 656 NAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN----------YDISARNIVLAMRT 705
+H I FP L + P + ++ ++I+++ F YD RN T
Sbjct: 714 KRKHKIQFPSHL-DAVPDSS--VFYLHVIKMEAAFEKPNDNREKALYDFIKRNECYGFLT 770
Query: 706 ELESEIKKVNFDLEVERGRLTVNLK-HLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKL 764
+ + K F G +T +++ + I+L P L ++F LF I+ +
Sbjct: 771 Q-KPLPKLCEFPAFTSVGEITTSIEVNYAVIKLTPIIFELVKQFHYFLFDQIL-----AI 824
Query: 765 NEILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHT 824
N+ FE N +L G IDW T+ T + A V
Sbjct: 825 NKKFLIFEGTKNCMYVVPVLEHNGYNIDWATMQT------------HHTVPPVAAPSVEE 872
Query: 825 KSGPLCTCKIHNSLVCTP-HNGQI----YCITGVLGHLNANSLFTRNNGSVTTYKKHYEE 879
+ + T + + + + TP + G I Y +T VL ++ S F +
Sbjct: 873 RKSLVVTEENYTNCIVTPWYRGTILPERYVVTKVLEYMTPKSQFDADCYESYANYYANNY 932
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYL------SKCRQQKQKEPSKISF--ELP------- 924
I L + +PLL R I N L K KQ + I+F + P
Sbjct: 933 NLDI-LGSESQPLLEVRNISTRMNCLLPRAATLKAFTDKQLKMISIAFGDDKPKGFAEIF 991
Query: 925 -PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL 962
PE C P L +Y T +PSI+HR+ LL+A L
Sbjct: 992 IPEFCIKYDYPGVL--WYKATLLPSIIHRVHMLLVAHEL 1028
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 208/429 (48%), Gaps = 80/429 (18%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
VL A+TT + F LE ETLGDSFLK+AAS L + N +EG L+ K ++ISN L
Sbjct: 1191 VLAALTTINSNDTFDLERPETLGDSFLKFAASLYLHHKFPNMNEGQLTNIKGKLISNRNL 1250
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG----------------------------DNSG 1071
G + L G ++ E F P+ +++PG +
Sbjct: 1251 YYAGAKFNLGGRMKVEQFSPRSDFLVPGFFAPPKLEEFIEQRQIRPTFLIGIQFTEEEVM 1310
Query: 1072 SYELNDDSL--------------------FNGRKIYVTGRKKVKSKTVADVVEALIGAFL 1111
+ EL+++S N + YV + V K++AD VEALIG +L
Sbjct: 1311 TGELSEESWESVMNNFQNGIAEAEPEGCAQNSMQCYVHSQA-VADKSIADSVEALIGTYL 1369
Query: 1112 STGGENVGLIFLDRIGI---KVDF-------VNVPYQRQFQVHAE---RLVNVR-HLESL 1157
+GG + L+ + + + +F V P + A+ L N R +E +
Sbjct: 1370 LSGGILAAVKLLEWMEVFPPQDNFADMLHKPVQTPLSKNLATEADIDFLLNNSRTDVEKI 1429
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
LNY+F+D + L+ AL+H SY+ + Y+RLEFLGDA++D+L+T +++ L PG +
Sbjct: 1430 LNYTFKDSTFLLNALSHSSYIRNRLTSSYERLEFLGDAIIDFLVTSHIFENCRELKPGEM 1489
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHI---LHAS----------HELYKRINITVDSFEKL 1264
TD+RSA VNN +A +VK GLHK++ L+ S H++ + I D +
Sbjct: 1490 TDLRSALVNNVTFAAYTVKLGLHKYLCSELNPSLEKAIMKFVEHQIERNHEIEFDVLLLI 1549
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
S E V PK L DI E+L GA+++DSG N E V+ + ++ I + R
Sbjct: 1550 SEVDCQVAEYV-DVPKVLSDIFEALVGAVYLDSGGNLETVWSVLYKIMHVEIDSFSKRIP 1608
Query: 1324 -HPVRELTE 1331
PV+ L E
Sbjct: 1609 KQPVKILYE 1617
>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1827
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 272/1041 (26%), Positives = 436/1041 (41%), Gaps = 160/1041 (15%)
Query: 365 SGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
S L+ K+V L+ L E + D + IIFV + TA +L L S+ + +
Sbjct: 715 SNNLSSKVVLLVRYLRERFERPTDDKAIIFVNQRYTARLLAKLFSQPNIGTPHLRCGTLV 774
Query: 424 GNNSGIQC---QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
G SG QS + Q + FR+G +N + ATS+ EEGLDV CNLV+ FD T+
Sbjct: 775 GTRSGDAGDLNQSFRDQVLTMGNFRKGNINCLFATSVAEEGLDVPDCNLVVRFDLYTTLI 834
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSPLNN 538
+IQSRGRAR QNS Y+ M ++G++ + + + N +RK E L P N
Sbjct: 835 QYIQSRGRARHQNSRYIHMYEAGNTEHATIMLEVRKNENILRKFCEAL--------PENR 886
Query: 539 HMYGEDF-------------YHVESTGTIATLSSSVSLIYFYCSRLP--SDGYFKPTPKF 583
+ G D+ + STG T S++++ + LP D +P
Sbjct: 887 KLTGNDYDMDHFLAKEKSHRIYKTSTGAKLTYKMSLTVLANFVDSLPHAQDTNLQPEYII 946
Query: 584 HINKEMGICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIV 641
++ IC LP P + + + + K +A E C L + L ++LLP
Sbjct: 947 TVHNRHFICETILPEGSPFRGSVGRPCSTKQVAKCSAAFETCLGLVKCKLLDEHLLPTFT 1006
Query: 642 VE---------KHDAQKRGNEPYNAE-HPIYFPPELVNQSPQDTKITYHCYLIELKQHFN 691
+ D++KR E Y + P + V P++ TY + L
Sbjct: 1007 KQLPAMRNALLAVDSKKR--EAYEMKTKPTLWS---VGGVPEEFFATY----LVLDNPKV 1057
Query: 692 YDISARNIVLAMRTELESEIKKVNFDLEVERGRLT-VNLKHLGR-IQLIPNQVLLCRRFQ 749
D ++ +VL R+ L + +F L R + V + + + I+ P + F
Sbjct: 1058 LDRPSQPLVLLTRSRLP---QLPSFYLHFGSNRHSPVEMVSIAQSIKATPEVIAQINTFT 1114
Query: 750 ITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST-----------GQLIDWKTVAT 798
I LF N++ D ++ Y L P LI W +
Sbjct: 1115 IYLF-----------NDVFSKLYESDVAKMPYFLAPGISLSEVTANTDLSSLIAWDVLKA 1163
Query: 799 VLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNG--QIYCITGV--- 853
V D+ K N ++ + T+ + + P++G +++ I GV
Sbjct: 1164 V---EDHVIKWADN---PWDNKSWQTEPDEF----FKDKFIVDPYDGSRKLWTI-GVTRD 1212
Query: 854 ---LGHLNANSL----FTRNNGSVTTYKKHYEERYGIQLCFD-REPLLNGRRIFHVQNYL 905
LG + NS +NN ++ Y + + FD + ++ I +N L
Sbjct: 1213 HSPLGPVPPNSAPRHGTRKNNNNIMEYSCSLWSKARARRTFDPNQRVVEAEFISLRRNLL 1272
Query: 906 SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA------ 959
+ +++ P K L P + ++PI S P+I+HRL+S L+A
Sbjct: 1273 DEFDTPEEEIPKKCFVILEP----LKISPIPTSVVAMAYVFPAIIHRLESYLIALEACQL 1328
Query: 960 VNLK---NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
+NLK ++ L+ C ++ E + ++ + + E LE LGD FLK A S LF
Sbjct: 1329 LNLKIRPDLALEACTKDSDNSEDHGTEQVNFQRGMGN-NYERLEFLGDCFLKMATSISLF 1387
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELN 1076
+ N E V + +I N L + KL +IR+++F + W G
Sbjct: 1388 GIHPENDEYSYHVDRMMLICNKNLKNNAVKLKLYQYIRSQAFSRRAWYPEG--------- 1438
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------ 1130
L G+ K+ K++ADV EALIGA L T E+ + R ++
Sbjct: 1439 -LVLKQGKTAAAPTTHKLGDKSIADVCEALIGAALLTYHESKDMDAAVRAVTELVSSENH 1497
Query: 1131 ------DFVNVPYQRQFQVHAERLVNVRHLESLLN----YSFRDPSLLVEALTHGS--YM 1178
D+ + + ++Q+ A+ R+L + L Y F+ P L A TH S Y
Sbjct: 1498 QVTCFADYYKLYKKPKYQL-AQATEMQRNLAAQLEQEHPYHFKYPRLARSAFTHPSYPYS 1556
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHG 1238
+P YQRLEFLGD++LD +LY+ +P P +LT+ + A V+N V G
Sbjct: 1557 YEHVP-SYQRLEFLGDSLLDMACINFLYHAFPDKDPQWLTEHKMAMVSNQFLGALCVSLG 1615
Query: 1239 LHKHILHASHELYKRI-----NITVDSFEKLSLGSTFG----------WESVTSFPKALG 1283
H+H+L + K+I +IT + + G W SV PK L
Sbjct: 1616 FHRHLLLFNAGFQKQISDYVTDITEARTQAEADAVRAGKSPQDCNPDYWTSVRQPPKCLP 1675
Query: 1284 DIIESLAGAIFVDSGCNREVV 1304
D++E+ GAIFVDS N V+
Sbjct: 1676 DVVEAYIGAIFVDSEYNYAVI 1696
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 12/213 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSP----FVAVFLVPK 77
R YQ E A+ +N I L+TGSGKTLIA++LLR +A L + ++ FLV
Sbjct: 389 RQYQTELFNEAINKNVIAVLDTGSGKTLIAVLLLRHIFAQELEDRAKGLPKRISFFLVDS 448
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQ +K + D + + GDMG+D W +TW++ + K+ V+V T ++L L S
Sbjct: 449 VQLVFQQHAVLKANLDQPMEMFCGDMGIDLWKKSTWEKHLDKNMVIVCTAEVLRHCLHHS 508
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ + I +LI DE HHA+ H YA I+ +FY + LP+IFGMTASP+ ++V
Sbjct: 509 FLSMAQINLLIFDEAHHAKKDHAYARIIKDFY--VTHEDKHTLPKIFGMTASPVDARV-- 564
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFI 230
D + +LE++++S++ T + +L I
Sbjct: 565 ---DVRKAAAELESILHSQICTASDPKLLQQTI 594
>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1523
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 185/649 (28%), Positives = 301/649 (46%), Gaps = 80/649 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY--LLRKPS---PFVAVFLVPK 77
R YQ+E E A QNTI L+TGSGKTLIA++LL+ L+ + + P ++ FLV
Sbjct: 117 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLLLKHIIQNELIDRANGKPPRISFFLVDS 176
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V L QQA ++ + D V +++G MG D W TW + + V+V T +IL L S
Sbjct: 177 VTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQCLLNS 236
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y +++ I +LI DE HH + H YA I+ E Y L+ + PRIFGMTASPI +K
Sbjct: 237 YIRMDQINLLIFDEAHHTKKDHPYARIIRESY---LKADPTKRPRIFGMTASPIDTK--- 290
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFI--PFSTAKFKFYKYDEIPHALYTHLAD 255
D + LE L++SK+ T + ++L + P + ++YD++ T L
Sbjct: 291 --GDIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEES----WEYDKLDPPFATKLYQ 344
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL---SELGVWLALKAAETIS 312
L QA +S + + L SELG A +A
Sbjct: 345 IL-------------------QARF--GDISSLQPVFRFTLQASSELGPCCADRAW---- 379
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS-IGDDSKFNLDS--GLLT 369
Y +L+G + + S Q + + E S I + FN + G L+
Sbjct: 380 AYALADDVLPKLEGNVRKLAQSISSPIPQCALKEISRIQEASDIVKNHSFNSPNVPGELS 439
Query: 370 EKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI------ 422
K+ L + L++Y +CI+F ++ TA +L L S T + Y+
Sbjct: 440 PKVQLLRQKLIKYFEHPTKTKCIVFTQKRYTAKMLFDLFS-------TLEIPYLRPGVLI 492
Query: 423 ---AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
+G+ G+ R++ +V +FR G +N + ATS+ EEGLD+ CNLV+ FD T+
Sbjct: 493 GVRSGDIVGMNVSFRQQFLALV-KFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTL 551
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASL---PCS 534
++QSRGRAR +S Y M++ ++ +RL + M+ E L + S
Sbjct: 552 IQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILHGIDS 611
Query: 535 PLNNHMYGED---FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG- 590
+++ + GE+ + + +TG T S+++++ Y S L + + + +
Sbjct: 612 EIDSILQGEEEKRTFIIRATGAKLTYHSALAILARYASSLQYEKETSAQATYVVLPQNNS 671
Query: 591 -ICTLYLPNNCPIQ--TVIAQGNIKTLKQAACLEACKKLHQIGALTDNL 636
+C + LP P++ T + KQ+A + C L + L D+
Sbjct: 672 FVCEVILPEKSPVRGLTGVPASKKSAAKQSAAFDTCVLLRKHKLLDDHF 720
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 186/421 (44%), Gaps = 62/421 (14%)
Query: 928 CRIIMAPISLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKV 981
C + + P+ +S S P+I++RL + L+A L+ C ++++
Sbjct: 996 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIA-------LEGCKTLDLSVKPEYA 1048
Query: 982 LEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
LEA T + H E LE LGD FLK A S LF ++ E
Sbjct: 1049 LEAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDF 1108
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--- 1084
V + +I N L +++L + R+ F W G +L +GR
Sbjct: 1109 HVNRMCLICNKNLFNTALKKELYQYTRSRGFSRHTWYPDGL----------TLLHGRDHR 1158
Query: 1085 -KIYVTGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN-------- 1134
KI + ++ KTVADV EALIGA L +GG N + + + VD N
Sbjct: 1159 KKISAESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWAD 1218
Query: 1135 ------VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCY 1186
+P + L R +E L Y F+ P LL A TH SY ++P CY
Sbjct: 1219 YTSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CY 1277
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA 1246
QRLEFLGD++LD + L+ +YP P +LT+ + A V+N +VK GLH H+ H
Sbjct: 1278 QRLEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHF 1337
Query: 1247 SHELYKRIN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
S+ L +I + + E S G+ W PK L D++E+ GA FVDS V
Sbjct: 1338 SNPLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRV 1397
Query: 1304 V 1304
V
Sbjct: 1398 V 1398
>gi|312384317|gb|EFR29067.1| hypothetical protein AND_02261 [Anopheles darlingi]
Length = 1651
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 261/1043 (25%), Positives = 449/1043 (43%), Gaps = 174/1043 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSP 68
+E D +P R+YQ + + L++NTIV+L TG+GKT IA+M++R ++ LR
Sbjct: 5 KEPDEDLVP--RDYQQQMKDICLRKNTIVYLPTGAGKTYIALMVMREMSHQLRSNIDDGG 62
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
+ FL V L QQA+ V Y ++ VD W W E + ++LV T Q
Sbjct: 63 KRSFFLANTVALAKQQAQFFCRFFPFNVRLYTSEVNVDTWKQDRWLNEFREVQILVSTSQ 122
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
ILLD LR Y + I +++ DECH A G+H IM E L+ + PR+ G++
Sbjct: 123 ILLDILRHGYLSPSNINLIVFDECHRAVGQHPMHAIMKE----LMGVPKNCQPRVIGLSG 178
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST---AKFKFYKYDEI 245
+ + ++ S Q +++ LE ++ + T ++ FST K Y+ +
Sbjct: 179 TLLYRELKSKTQ-VEEELERLENTFSATIATVGDYDEYTSMCSFSTNAQEKICVYRNSFL 237
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNE---AQAELIRKKVSKINSTLLYCLSELGVW 302
+ + M+ +K +E + L + A +R K + L+E
Sbjct: 238 ESVPVIKMV--IGMV-MKFGEQIEKIHLPKYSLQSASTLRVSAPKPTKEVKRALNEF--- 291
Query: 303 LALKAAETISCYESDFFAWEQ---LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
SC+ S+ + Q D + KF SD + ++ Y+
Sbjct: 292 -------QHSCWSSEVYCVLQSVMKDMPIRVQVMKFSSDRVRRMIMYLEQ---------- 334
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDI--RCIIFVERVITAIVLQSLL--------SE 409
EY G D + ++FV+R +A VL +L
Sbjct: 335 ---------------------EYSGTVDAEKQALVFVKRRFSAKVLYHVLRLYFGHDEQN 373
Query: 410 LLPRHCTWKTKYIAGNNSGIQCQSR-----KKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
L + ++I G N ++ K +++++FR+ +NV+ AT++LEEG+D+
Sbjct: 374 LPDEDAIVRPEFIVGVNRPMEESIEHIIVAKHDRQVIKKFRKHQINVLCATNVLEEGIDL 433
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRK 523
Q CN+V+MFD + S++QS+GRARM++S YLLMV D S +R++ Y N ++K
Sbjct: 434 QMCNIVVMFDEPLSYSSYMQSKGRARMKSSTYLLMVNDEDRSKFTARIQLYHDIENTLKK 493
Query: 524 EVLSHASLPCSPLNNHMYGEDFYHVES-----TGTIATLSSSVSLIYFYCSRLPSDGYFK 578
++ PL + + E + + G L+SSV L+ YC +P D +
Sbjct: 494 ALIGKTINRPEPLEHDVRKELLDDITAPFITPAGAKLDLTSSVQLLNRYCMSMPRDLFTG 553
Query: 579 PTPKF-HINKEMGIC-TLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALT 633
+ I + IC T+ LP I+ V+ N+K KQ+A CK+L+++G L+
Sbjct: 554 TNVAWERIEQHGKICVTVKLPLQSTIREVVHGEPMKNLKLAKQSAAFNVCKQLYEVGELS 613
Query: 634 DNLLPDIVVEK-----------------HDAQKRGNEPYNAE-HPIYFPPELVNQSPQDT 675
+LLP V +K K+ + N + +++P E + +P+
Sbjct: 614 MHLLPVTVKDKVQQVEDLYFSHWRAVGVETKPKQAGQANNVRCYRVHYPAESQHCTPRTD 673
Query: 676 KITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERG-------RLTVN 728
+ Y++ K F+ NI A+ ++L S NF + + +L +
Sbjct: 674 TDECYVYILRTKALFDRGTQGDNI--AIFSDLYSSSN--NFGIMTRKPLPSLAPMQLFCS 729
Query: 729 LKHLG--------RIQLIPN----QVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDN 776
L +G RI L P Q+ +RF + LFR ++ K LD E +N
Sbjct: 730 LGKIGVEVVREPLRITLDPGAGGEQLAKLKRFHLLLFRDLLRLW--KQFIALD-VEAAEN 786
Query: 777 LEIDYLLLP-STGQLIDWKTVATVLFPRDNGSKHNMNCS---TMFNA-----RIVHT--K 825
+L++P + + IDWK V T FP S+ + +FNA R++H K
Sbjct: 787 ---GFLIVPMADSKTIDWKLVDT--FPYLQQSEEPTTLARQRMIFNAEGYRNRVIHPWYK 841
Query: 826 SGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYG-IQ 884
S P+ Q Y + V L+ S F NG+ +++ ++ ++ +
Sbjct: 842 SDPM----------------QNYVVVKVHEELSPLSPFP--NGAYKSFEHYFSAQHQQVI 883
Query: 885 LCFDREPLLNGRRIFHVQNYLSKCRQQK--QKEPSKISFE--LPPELCRIIMAPISLSTF 940
+ D + L+ + I N L +Q + F+ L PEL P +
Sbjct: 884 VRPDDQFLIEVKGISTNLNLLHPGTEQDGGNARSRRRDFQELLIPELVHNFEFPADY--W 941
Query: 941 YSFTFVPSIMHRLQSLLLAVNLK 963
T +PS++HR+ LL++ ++
Sbjct: 942 LKATLLPSVLHRVHYLLISEQIR 964
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 203/438 (46%), Gaps = 68/438 (15%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV++ +L+A+T+K + F+LE E LGD+FLK++ S L + HEG L+ K
Sbjct: 1169 NVSLQQADILQALTSKHAHDVFNLERFELLGDAFLKFSVSAFLLMRHVTWHEGYLTTCKG 1228
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPK-MWIIPGDNSGSY------------------ 1073
R++SN L + LPG + FDP+ W+ P
Sbjct: 1229 RMVSNRNLLYCAMQYGLPGMQKVHRFDPRNEWLPPLATVPKVIREAMIKAKEMPALLFKL 1288
Query: 1074 ELNDDSLFNG-----------------------RKIYVTGRKKVKSKTVADVVEALIGAF 1110
EL+++ + +G + V +V KTVAD +EAL+G
Sbjct: 1289 ELSEEEVQSGIVQQSKIDAFLPMIKESEEESRSTLMAVLQHVQVSDKTVADSMEALLGVC 1348
Query: 1111 LSTGGENVGLIFLDRIGIKV------------DFVNVPYQRQFQVHAERLVNVRHLESLL 1158
+ G L GI ++ + YQ + + L+N +E +
Sbjct: 1349 VKAVGYERSFRALSHFGIMPRDTDLAKLLRTHEYTVLNYQDERETIDRLLINPEKIERTV 1408
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
Y FR+ + L++A TH +Y + + Y++LEFLGDAVLD+LIT+Y++ + P +SPG LT
Sbjct: 1409 GYKFRNRTFLLQAFTHATYTTNTLTKSYEQLEFLGDAVLDFLITLYIFERNPHMSPGQLT 1468
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV-----------DSFEKLSLG 1267
D+RSA VNN A V+ LH +IL S L +I+ V D L+
Sbjct: 1469 DLRSALVNNVTLACVLVRFRLHHYILSQSPMLTDKIDKFVEVQGQKRNRIGDWVRLLTEE 1528
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR--FHP 1325
S PK LGD+ E+L GAI++DSGC+ ++ LL+ I ++
Sbjct: 1529 SETPLAEYVDVPKVLGDVFEALIGAIYLDSGCDLVTTWRICYSLLQREIENFSLDTPIQV 1588
Query: 1326 VRELTEYCQ-KNHFSMKK 1342
VR+L E+ + HFS +
Sbjct: 1589 VRQLYEHQDARPHFSAPR 1606
>gi|327297344|ref|XP_003233366.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
gi|326464672|gb|EGD90125.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
Length = 1519
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 304/655 (46%), Gaps = 119/655 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--------SPFVAVFL 74
R YQLE E + ++N I LETGSGKTLIA++LL+ +++ + P ++ FL
Sbjct: 112 REYQLELFEKSKEKNIIAVLETGSGKTLIAVLLLK---HVIEQELTDRSLGLPPRISFFL 168
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V V LV QQA ++ + K+ K+ G M D W+ TW+ ++ V+V T ++L L
Sbjct: 169 VDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCL 228
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S+ +++ I +LI DE HHA+ +H YA I+ +FY + E P+IFGMTASP+ +K
Sbjct: 229 LHSFIQIDQINLLIFDEAHHAKKEHPYARIIKDFYLKEPERK----PKIFGMTASPVDAK 284
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTH 252
V + LE +++S++ T ++ ++L + T + Y E+P LY
Sbjct: 285 V-----EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYRK 339
Query: 253 LADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
L + I++ LE + K S+ S S LG W
Sbjct: 340 LRQKFGDIKV-----LEKI-----------FKFSRETS------SSLGSWC--------- 368
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP--------------SGA---EWSI 355
SD+ W E + K + +++ L+ +P +GA E
Sbjct: 369 ---SDWI-WSYC--LSEETLPKLEARSNRPLMKSIPNQPSCDTEAERIREAGAIIKEHEF 422
Query: 356 GDDSKFNLDSGLLTEKI-VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
GD + LL+ K+ + + L ++ D RCI+F + TA +L+ L ++
Sbjct: 423 GDPVA---NPELLSRKVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKI---- 475
Query: 415 CTWKTKYI----------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
++YI G+ G+ R++ ++ FR+G +N + ATS+ EEGLD+
Sbjct: 476 ---GSQYIRPNLLVGVRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAEEGLDI 531
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
Q CNL++ FD T+ +IQSRGRAR S + MV+ + ++ +E S +E
Sbjct: 532 QDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVERNNLMHETAVEEVRRS-----EE 586
Query: 525 VLSH--ASLPCSPLNNHMYGEDF----------YHVESTGTIATLSSSVSLIYFYCSRLP 572
VL+ SLP L D Y ++STG T SS++++ Y S L
Sbjct: 587 VLTRFCKSLPEDRLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQ 646
Query: 573 SDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEAC 623
+ + I+ + G IC LP PI+ + + + L KQ+A E C
Sbjct: 647 YEKELSTQVSYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 701
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 210/469 (44%), Gaps = 61/469 (13%)
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
+Q C +P+L I +N+L + K P + + + E +I + L+T
Sbjct: 956 MQRCNWDQPVLRSELIQLRRNFLDI--DENPKSPP-VDYYVCAEALKISAISVPLAT-QI 1011
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------ 995
F F P+++ R++S L+A L+ C + IP LEA+T + H
Sbjct: 1012 FVF-PAMIWRMESYLIA-------LEACENLQLKIPPELALEALTKDSENTEEHGMEQIR 1063
Query: 996 --------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGD FLK A S LF +N E VK+ +I N L
Sbjct: 1064 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAINL 1123
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTG-RKKVKSKTVADVVE 1104
++ FIR+ SF + W G +L G+ K G + KT+ADV E
Sbjct: 1124 EIFKFIRSRSFSRRAWYPEGL----------TLLKGKDKKEGPNGPEHALADKTIADVCE 1173
Query: 1105 ALIGAFLSTGGENVGL--------IFLDRIGIKVD-------FVNVPYQRQFQVHAERLV 1149
ALIGA L GG + +F++ +V+ ++P + A +
Sbjct: 1174 ALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSRLYSLPNYQTASASASEID 1233
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++S L Y F+ P LL A H SY +P CYQRLEFLGD++LD + +L+
Sbjct: 1234 VANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFE 1292
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL- 1266
+YP P +LT+ + A V+N +V LH H++H S+ L +I + + + +
Sbjct: 1293 RYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIK 1352
Query: 1267 --GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
G+ W PK L DI+E+ GAIFVDS N +VV R ++
Sbjct: 1353 MEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVVDDFFRKFIQ 1401
>gi|346970337|gb|EGY13789.1| RNase3 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1563
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 298/644 (46%), Gaps = 69/644 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR------SYAYLLRKPSPFVAVFLVP 76
R YQ+E E A ++N I L TGSGKTLIA +LLR + KP +A FLV
Sbjct: 148 REYQIELFERAKRKNIIAVLPTGSGKTLIAALLLRHTLEQETADRRAGKPKR-IAFFLVE 206
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
KV L QQ ++ + + + + GDM W +W + + V+V T IL L
Sbjct: 207 KVALALQQHAVLECNLEFPIDRVCGDMVRSDWIKESWMKRWDDNMVMVCTAAILQQCLAR 266
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS--- 193
S+ +++ I +L+ DE HHA+G H YA I+ ++Y + E P+IFGMTASP+ +
Sbjct: 267 SFIRMDQINLLVFDEAHHAKGNHPYARIIKDYY--ITEPDKERRPKIFGMTASPVDALTD 324
Query: 194 -KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTH 252
K+++++ LE L++S++ T +SV I + + KY + T+
Sbjct: 325 VKIAAAQ---------LEGLLHSEIATIEEDSVSFKQIQKEVVE-QDCKYPALEPPFTTN 374
Query: 253 LADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
L H + E + N K +K S L S LG W +
Sbjct: 375 L----------HKKIQEQVRYN--------KNFAKALSNSLEMSSSLGSW-------CVD 409
Query: 313 CYESDFFAWEQLDGFGETIIKK--FGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE 370
+ F E L + F A + V +I +F + L +
Sbjct: 410 RFWQIFLTEETLARLAAQTAQDNIFADRAEKERVAIEEVR---NIIKQHQFLPITKTLQD 466
Query: 371 ---KIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
K++CL+ L L + D +CIIFVE+ TA++L LLS K + GN
Sbjct: 467 LSSKVLCLLGQLELRFSAPTDHKCIIFVEKRNTAMILAHLLSLPGIGPLYLKPAALVGNP 526
Query: 427 SGIQ--CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
S S K+Q + +FRRG N ++ATS+ EEG+D+ CN+VI FD +V +IQ
Sbjct: 527 SDNSPLAMSYKEQVMTITKFRRGEYNCLLATSVAEEGIDIADCNIVIRFDLFNSVIQYIQ 586
Query: 485 SRGRARMQNSDYLLMVKSGDST-TQSRLE-NYLASGNKMRKEVLSHASL-----PCSPLN 537
S+GRAR NS+Y+ M + G+ T+++++ NY S + L P + L+
Sbjct: 587 SKGRARHLNSEYICMAELGNGKHTRAKIQANYDLSLIRQFCSTLPEDRKIVGWDPEAALH 646
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLP-SDGYFKPTPKFHINKEMGICTLYL 596
+ F+ V STG T + S+ ++ + S L +D P+ + IC + L
Sbjct: 647 HGERDHKFHIVPSTGAKLTWTGSLVVLSNFASSLQVNDETLSPSYMVSLIGSEYICEVQL 706
Query: 597 PNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
P+ PI +V Q N + +A E C KL + G ++ +L P
Sbjct: 707 PSKSPILSVSGTLQKNKAEARCSAAFEMCMKLIKGGFISSHLQP 750
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 257/589 (43%), Gaps = 101/589 (17%)
Query: 869 SVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELC 928
S++ + K R G L D +P++ + +N L + K E S++ C
Sbjct: 983 SISLWAKSRARRAGEWL--DTQPVVEAELVSLRRNLLDEFADSKH-EGSRV--------C 1031
Query: 929 RIIMAPISLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTI 979
+I+ P+ +ST Y+F P+I+HR++S ++A LD C M N+ +
Sbjct: 1032 YVILQPLQISTLPVEVVAMAYNF---PAIIHRIESNMIA-------LDACRMLNLRVRPD 1081
Query: 980 KVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
LEA+T + H E LE LGD FLK A + LF +++E
Sbjct: 1082 LALEAMTKDSSNSEEHDQEKIDFQAGMGNNYERLEFLGDCFLKMATTIALFTRIPDSNEF 1141
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRK 1085
V++ +I N L + ++ L +IR++ FD + W G + G+
Sbjct: 1142 ECHVERMLLICNQNLFNVALKKNLQEYIRSKQFDRRSWYPQGLKQKA----------GKA 1191
Query: 1086 IYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVN---------- 1134
+ K++ADV EA+IGA +LS E + + + V N
Sbjct: 1192 QGAQNSHSLADKSIADVCEAIIGASYLSYTDEGNFDMAVRAVTAVVRNKNHDMKSYEDYY 1251
Query: 1135 ----VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQR 1188
+P + + A ++ ++ + Y F+ P+LL A H SY +P YQR
Sbjct: 1252 KAFKMPIWQAAEPSAVQMEASLQIKEQMGYEFKSPALLRSAFKHPSYPRQFESVPN-YQR 1310
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGDA+LD + +L+ K+P P +LT+ + A V+N SV+ G ++ +LH +
Sbjct: 1311 LEFLGDALLDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVLHFNS 1370
Query: 1249 ELYKRINITVDSF-----EKLSLGSTFG------WESVTSFPKALGDIIESLAGAIFVDS 1297
+ +I VD+ E ++ G W +V PK L D++E+ GAIFVDS
Sbjct: 1371 IMANQIKDYVDALTHARQEAEAVAQISGTVSRDYWLNVKHPPKFLSDVVEAYIGAIFVDS 1430
Query: 1298 GCNR---EVVFQS-IRPLLEPMITPETM-RFHPVRELTEYCQKNH-------FSMKKPVA 1345
G + + F+ IRP M ++ HPV L Q++ + P +
Sbjct: 1431 GYDYGQVQAFFEKHIRPFFADMALYDSFASSHPVTTLARMMQQDFGCQDWRLLVSELPPS 1490
Query: 1346 SRISGKAAVT-VEV----QANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
G AA+T EV +GR+ H + + AK A K ++ L
Sbjct: 1491 CEDGGAAAITETEVICGFMVHGRILLHA-KSSSGRYAKVGAAKRAVEKL 1538
>gi|384500232|gb|EIE90723.1| hypothetical protein RO3G_15434 [Rhizopus delemar RA 99-880]
Length = 1239
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 255/508 (50%), Gaps = 45/508 (8%)
Query: 848 YCITGVLGHLNANSL----FTRNNGSVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQ 902
Y IT V +N S F T+ +Y + + D E P++ R+
Sbjct: 650 YLITDVRYDMNPQSAVPSGFDIREAGYPTFIDYYRDLGDKFVIHDYEQPMIEVERLKRGM 709
Query: 903 NYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL 962
++L + + P+ C ++ S + + +PSIM R+ SLLL +
Sbjct: 710 DFLHPGGNMPARSKGPARTWVVPQFCTQYF--VNASVYIAMLMIPSIMTRIDSLLLCYDS 767
Query: 963 KNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNN 1022
+ ++ I +LEA T + E LETLGDS LK+ A+ +L+ + +
Sbjct: 768 R------ARYDLPITDEYMLEAYTMPSASMEMDYERLETLGDSLLKFIATIRLYINFPFS 821
Query: 1023 HEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFN 1082
+EG L + R++ N AL + K ++ +++F+ + W P S + N D++ +
Sbjct: 822 NEGELHHLRIRVVCNRALYRAAKRLKFYRYVTSQAFNRRHWRPPHFTSTAD--NADTMES 879
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENV------GLIFLDRIGIKVDFVNV 1135
+K K+ KT+AD+VEA +GA +LS+G E I D+I DF NV
Sbjct: 880 LKK------HKLSDKTLADIVEASLGAAYLSSGLEGCLHTAIQMQIPFDQIEKWSDF-NV 932
Query: 1136 PYQR-------QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
++ + +V A R++++ ++ L++ F P L+VEALTH S P CYQR
Sbjct: 933 AFEESRKAVPPRAEVKALRMLDLPKIQVLVDREFNKPLLVVEALTHASLPNSTSP-CYQR 991
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGDA+LD+L+ YLY KYP PG +T ++ + VNN + + +GLHKHI+H S
Sbjct: 992 LEFLGDAILDFLVIRYLYTKYPDAEPGQITTLKDSCVNNHVLGIICLNNGLHKHIIHYSG 1051
Query: 1249 ELYKRINITVDSFEKL-SLGSTFG--WESVTSFPKALGDIIESLAGAIFVDSGCN----R 1301
+L + IN + ++L G G W + + PK L D++ES+ GA+FVD+ +
Sbjct: 1052 KLVRAINTLEEEVQELKDTGKAVGEYWADM-NIPKVLSDVVESMLGAVFVDAKFDLSPCA 1110
Query: 1302 EVVFQSIRPLLEPMITPETMRFHPVREL 1329
+ + P+ + +TPE +R HP+R+L
Sbjct: 1111 ALFDKWFVPIFDANVTPELVRIHPMRKL 1138
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 143/271 (52%), Gaps = 24/271 (8%)
Query: 391 IIFVERVITAIVLQSL---LSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRG 447
IIFVER TAI LQ L L L C + + +Q + K+QN+++++FR G
Sbjct: 76 IIFVERRHTAIALQKLIESLDTLDKIKCGILIGHGTADEGDVQ-MTFKEQNKVIQKFRSG 134
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
+N ++AT++ EEGLD+Q CN VI FD T+ ++IQSRGRAR +S Y++M++ +
Sbjct: 135 ELNFLIATNVAEEGLDIQPCNFVIRFDFFHTLIAYIQSRGRARCIDSKYVIMIEDNNLNQ 194
Query: 508 QSRLENYLASGNKMR---------KEVLSHASLPCSPL-NNHMYGEDFYHVES------T 551
L+ + M+ + V + SL +++ Y D ++ES T
Sbjct: 195 IGTLDEFRMLEEAMKSFCQALPAERNVANRFSLSMEGYESDNEYDSDEDYLESAIIDMDT 254
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMGI-CTLYLPNNCPIQTVIAQ- 608
G T ++V LI+ YCS LPSD + P F HI G C L LP+N IQ V +
Sbjct: 255 GATITKQNAVPLIHRYCSSLPSDSFCVLKPIFEHIAAGEGYKCILTLPSNAAIQKVESPF 314
Query: 609 GNIKTLKQA-ACLEACKKLHQIGALTDNLLP 638
K L +A L+AC +L ++ AL +LLP
Sbjct: 315 VRSKDLAKALVALQACSELKRLDALDRHLLP 345
>gi|345494561|ref|XP_001602524.2| PREDICTED: endoribonuclease Dicer [Nasonia vitripennis]
Length = 1450
Score = 207 bits (526), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 301/608 (49%), Gaps = 75/608 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKV 78
AR YQ+ E ++QN+I++L TGSGKT IA++L++ + +++ +F+V V
Sbjct: 11 ARPYQIYLYEKTIEQNSILYLPTGSGKTYIAVLLVKRLSGDVQRQYTEGGKRTIFIVNTV 70
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQ + HT L Y GDMGVDFW W++E++ ++VLVMT QI L+ L Y
Sbjct: 71 ALVVQQTAFLTRHTGLVCKGYSGDMGVDFWSKEEWRKEINTNQVLVMTAQIFLNLLTHGY 130
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
L+ I +LI DECH A H IM R + LPR+ M+AS + + V
Sbjct: 131 ISLDKINLLIFDECHRAVKDHPMRQIM----QRFQDYPKEKLPRVLAMSASLLNANVPLG 186
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+ + + +LE +K+ T S + +++ ++T +F +Y E PH + L +E++
Sbjct: 187 KIE--TTLRELEVTFQAKIITVESLAYVTD---YATNPKEFVEYYETPHKI--SLLNEIS 239
Query: 259 MIELKHTRSLENLDL----NEAQAELIRKKVSK------INSTLLYCLSELGVW----LA 304
I + L+ + L ++ +I K VSK I S + L+++G++
Sbjct: 240 AIVEYASSILKQVVLPNRMENPESSMIFKPVSKTIKLNRILSDVEEHLTDMGLYGGSESV 299
Query: 305 LKAAETISCYESDFFAWEQLDGFGETI-----IKKFGSDASQALVTYVPSGAEWSIGDDS 359
L+ + C + E + F I I+K SDA + +P +
Sbjct: 300 LQHIIQLECLKRFGDEKEAIAMFDFIITQLVKIQKLLSDAMNEV--QLPDTIQ------- 350
Query: 360 KFNLDSGLLTEKIVCLIESLLE-YRGVEDIR---CIIFVERVITAIVLQSLLSELLPRHC 415
+F+ + K++ L+E L Y +E+ R CIIFV+R TA VL LLS+L C
Sbjct: 351 RFS------SSKVLKLMEVLKTFYNNMENKRNFCCIIFVKRRFTAKVLYQLLSKL--SSC 402
Query: 416 T-----WKTKYIAGNNSGIQCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
K +Y+ G ++ +R K +E++ +FR G+ N +VAT +++EG+D+
Sbjct: 403 DEDFQFLKPQYMVGYSNNPYKNARETVCIAKWNDEVLTKFRNGVANCVVATDVVDEGVDI 462
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
SC L++ + ++IQS+GRAR S ++++ S D SR ++ + +R+
Sbjct: 463 PSCTLIVRYYAPMDFRAYIQSKGRARHSTSHFIILASSEDDYI-SRYRSFQQTERFLRQA 521
Query: 525 VLSHASLPCSPLNNHMYGEDFYHV-------ESTGTIATLS--SSVSLIYFYCSRLPSDG 575
+ + P NN + + +V ++ GTI+ ++ S++SLI YC+ L
Sbjct: 522 LHGKSDYRIKPSNNDVDALLYQYVIQPYIVKDANGTISVITEQSAISLINEYCANLVKSK 581
Query: 576 YFKPTPKF 583
+ TP +
Sbjct: 582 FIMLTPTW 589
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 192/405 (47%), Gaps = 74/405 (18%)
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
+ +L+++TTK + F+LE +ETLGDSFLK+A S L++ Y EG L+ K +++ N
Sbjct: 1021 VDILQSLTTKVKNDVFNLERVETLGDSFLKFAISLFLYQAYPTCGEGPLTHLKGKLVGNL 1080
Query: 1039 ALCKLGCEQKLPGFIRTESFDPK-MWIIPG------------------------------ 1067
L ++ + G + E F P ++ P
Sbjct: 1081 NLFYCSKQKNIAGRMHVEDFAPTGNFVTPAYAAHQVLQQILRAEKVSANILYEIRVPAAE 1140
Query: 1068 ------DNSGSYELNDDSLF--NGRKIYVTGRKK------VKSKTVADVVEALIGAFLST 1113
N+ + + D L + K+ TG + V K+V+D EALIG +L
Sbjct: 1141 RFSGCISNNTTDMMQDKVLAWPSDEKVTHTGMEHFLGIQVVSDKSVSDCTEALIGTYLLH 1200
Query: 1114 GGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL----VNV-----RHLESLLNYSFRD 1164
G L L I +NV +V +L VNV + +E L Y FR+
Sbjct: 1201 LGIKGALQILKWFEILPKSLNVDQYLYSEVENPQLGDGDVNVHIPWAQTMEERLGYKFRN 1260
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
+ L++A TH SYM YQRLEFLGDAVLD+L+T+++Y LSPG LTD+RSA
Sbjct: 1261 RAFLLQAFTHPSYMPNRQTASYQRLEFLGDAVLDFLLTIHIYETCGNLSPGELTDLRSAL 1320
Query: 1225 VNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV--------- 1275
VNN +A +V++GLH +L + +L+ I D F K + +
Sbjct: 1321 VNNITFACLAVRYGLHTALLALAPKLFDLI----DKFVKFQENRNYKIDDELLWVLLEEE 1376
Query: 1276 -------TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
PK LGDI ES+ GAIF+DSG N EVV+Q I L++
Sbjct: 1377 ECNMAEHVDVPKVLGDIYESVIGAIFLDSGKNLEVVWQVIYNLMK 1421
>gi|310798327|gb|EFQ33220.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1532
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 290/645 (44%), Gaps = 70/645 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--------SPFVAVFL 74
R YQ+E E A +NTIV L+TGSGKTLIA +LLR ++L K +A FL
Sbjct: 114 REYQIELFERAKSKNTIVVLDTGSGKTLIAALLLR---HILEKEIEDRATGQQKRIAFFL 170
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V KV LV QQ ++ + + V ++ GDM + W W ++ ++ V+V T IL L
Sbjct: 171 VDKVSLVFQQHAVLECNLEHPVARFCGDMVDEMWSREFWAQKFEENMVIVCTAAILQKCL 230
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
SY ++ I +LI DE HH + H YA I+ +FY + E + PRI GMTASP+ ++
Sbjct: 231 THSYIRMEQINLLIFDEAHHTKKNHPYARIIKDFY--IKEPDANKRPRILGMTASPVDAQ 288
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
D I LE L++S++ T + ES LS K Y +P T L
Sbjct: 289 T-----DIKIAIAQLECLLHSEIATVSEES-LSRDSHVRKITEKEIHYSSLPMPYETELY 342
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
++ + ++ + L +A S LG W A + +
Sbjct: 343 QKINALVGRNQHFSKELCFAKA------------------ATSSLGPWAADRFWQLFLTD 384
Query: 315 ESDFFAWEQLDGFGETIIKKFGS-DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIV 373
E A +L E GS D A V + + LD ++ K++
Sbjct: 385 E----AIVRLTQRTEMSYSGLGSADRETAAVQKLRDVVRTHEFKPATPTLDQ--VSMKVL 438
Query: 374 CLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS--GIQ 430
L E L + RCI+FVE +TA++L L + + + G+ S G+
Sbjct: 439 RLWEELRPRFTSEPKYRCIVFVEMRLTAVLLADLFKQNHIKLSYLNPAVLVGSQSDTGLA 498
Query: 431 CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRAR 490
S K+Q + FR VN + AT + EEGLD+ CNL++ FD ++V +IQS+GRAR
Sbjct: 499 NMSFKQQVLTIHRFRHAEVNCLFATQVAEEGLDIPDCNLIMRFDLYKSVIQYIQSKGRAR 558
Query: 491 MQNSDYLLMVKSG-------------DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLN 537
Q+S+Y+ ++ G D + R N L K + + S L
Sbjct: 559 RQDSEYISFIEGGNGRQARMVLQATYDQSVLRRFCNALPEDKK-----IMGFDVKASILK 613
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGICTLY 595
++ + Y ++STG + T +SS+ ++ + + L P++ + + + +
Sbjct: 614 GDLHYKS-YLIKSTGAVLTWTSSLEVLANFAASLRQSNDEVCAPEYVVINQGQTFVAEVQ 672
Query: 596 LPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
LP PI V Q N + + +A E CK+L + + NL P
Sbjct: 673 LPERSPIMHVAGFPQSNKQAARCSAAFEMCKELIKKKYIDHNLQP 717
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 211/461 (45%), Gaps = 69/461 (14%)
Query: 926 ELCRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPT 978
++C II+ P+ +ST +FTF P+I+HR+ ++L+A LD C ++ I
Sbjct: 995 KICYIILEPLRVSTLPIETVVMAFTF-PAIIHRIDAVLIA-------LDACKFLDLDIRP 1046
Query: 979 IKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHE 1024
LEA+T D H E LE LGD FLK A + LF ++E
Sbjct: 1047 DLALEAVTKDSDNSDEHGKNKINFQGGMGKNYEQLEFLGDCFLKMATTIALFTQNPEDNE 1106
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR 1084
V++ +I N L ++ LP ++R++SFD + W G L G+
Sbjct: 1107 FAYHVERMLLICNQNLFNKAVDRSLPEYVRSKSFDRRSWYPSGLR----------LIRGK 1156
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV-----------DF 1132
+ + R + K++ADV EALIGA +LS N + + + V D+
Sbjct: 1157 EGSLNHRHALADKSIADVCEALIGAAYLSYAETNNFDMAIRAVTAMVKNKNHLMTSWGDY 1216
Query: 1133 VNVPYQRQFQV-HAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQ 1187
+Q H+ + R ++ L Y F+ P+LL A H SY ++P YQ
Sbjct: 1217 YTAYTPSAWQSGHSTAMQKELARQIKENLGYEFKYPALLRSAFKHPSYPRAYEDLPN-YQ 1275
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGDA+LD + +L+ K+P P +LT+ ++A V+N A V+ GLHKH+L
Sbjct: 1276 RLEFLGDALLDMVCVDFLFKKFPDADPQWLTEHKTAMVSNQFLACLCVQLGLHKHVLSGH 1335
Query: 1248 HELYKRINITVDSFE----KLSLGSTFG---WESVTSFPKALGDIIESLAGAIFVDSGCN 1300
L + V E + TF W V PK L D++E+ GA+FVDSG +
Sbjct: 1336 ASLLNQTQDFVGVLECAKQDAAADGTFSQCYWIHVKQAPKFLSDVVEAYIGALFVDSGYD 1395
Query: 1301 ----REVVFQSIRPLLEPMITPETM-RFHPVRELTEYCQKN 1336
R IRP M ++ HPV LT Q +
Sbjct: 1396 YGQVRGFFDAHIRPFFTDMALYDSFASRHPVTNLTRILQDD 1436
>gi|302422698|ref|XP_003009179.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261352325|gb|EEY14753.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1510
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 190/655 (29%), Positives = 304/655 (46%), Gaps = 91/655 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP--------FVAVFL 74
R YQ+E E A ++N I L TGSGKTLIA +LLR Y L + + +A FL
Sbjct: 148 REYQIELFERAKRKNIIAVLPTGSGKTLIAALLLR---YTLEQETADRRAGKPKRIAFFL 204
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V KV L QQ ++ + + + + GDM W +W + + V+V T IL L
Sbjct: 205 VEKVALALQQHAVLECNLEFPIDRVCGDMVRSDWIKESWMKRWDDNMVMVCTAAILQQCL 264
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS- 193
S+ +++ I +LI DE HHA+G H YA I+ ++Y + E P+IFGMTASP+ +
Sbjct: 265 ARSFIRMDQINLLIFDEAHHAKGNHPYARIIKDYY--ITEPDKERRPKIFGMTASPVDAL 322
Query: 194 ---KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALY 250
K+++++ LE L++S++ T +S I + + KY +
Sbjct: 323 TDVKIAAAQ---------LEGLLHSEIATIEQDSASFKQIQKEVVE-QDCKYSALEPPFT 372
Query: 251 THLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-------- 302
T+L H + E + N A+ + + +S +C+ W
Sbjct: 373 TNL----------HKKIQEQVRYNRNFAKALSHSLEMSSSLGSWCVDRF--WQIFLTEET 420
Query: 303 LALKAAET------ISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
LA AA+T E + A E++ IIK+ ++P
Sbjct: 421 LARMAAQTAQDNIFADRAEREHVAIEEV----RNIIKQH---------QFLPVTKTLQ-- 465
Query: 357 DDSKFNLDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+L S +L CL+ L L + D +CIIFVE+ TA++L LLS
Sbjct: 466 -----DLSSKVL-----CLLGQLELRFSAPTDHKCIIFVEKRNTAMILAHLLSLPGTGPL 515
Query: 416 TWKTKYIAGNNSGIQ--CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
K + GN S S K+Q + +FRRG N ++ATS+ EEG+D+ C +VI F
Sbjct: 516 YLKPAALVGNPSDNSPLAMSYKEQVMTITKFRRGEFNCLLATSVAEEGIDIADCKIVIRF 575
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST-TQSRLE-NYLASGNKMRKEVLSHASL 531
D +V +IQS+GRAR NS+Y+ M + G+ T+++++ NY S + L
Sbjct: 576 DLFNSVIQYIQSKGRARHLNSEYICMAELGNGKHTRAKIQANYDLSLIRQFCSTLPEDRK 635
Query: 532 -----PCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLP-SDGYFKPTPKFHI 585
P + L++ +F+ + STG T + S+ ++ + S L +D P+ +
Sbjct: 636 IVGWDPEAALHHGERDHEFHIIPSTGAKLTWTGSLVVLSTFASSLQVNDETLSPSYMVSL 695
Query: 586 NKEMGICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
IC + LP+ PI +V Q N + +A E C KL + G ++++L P
Sbjct: 696 IGSEYICEVQLPSRSPILSVSGTLQKNKAEARCSAAFEMCMKLIKGGFISNHLQP 750
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 194/452 (42%), Gaps = 102/452 (22%)
Query: 927 LCRIIMAPISLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIP 977
+C +I+ P+ +ST Y+F P+I+HR++S ++A LD C M N+ +
Sbjct: 1030 ICYVILQPLQISTLPVKVVAMAYNF---PAIIHRIESNMIA-------LDACRMLNLQVR 1079
Query: 978 TIKVLEAITTKKCQED--------------FHLESLETLGDSFLKYAASQQLFKTYQNNH 1023
LEA+T D + E LE LGD FLK A + LF +++
Sbjct: 1080 PDLALEAMTKDSSNSDEQDQEKIDFQAGMGNNYERLEFLGDCFLKMATTIALFTRIPDSN 1139
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG 1083
E V++ +I N L + ++ L +IR++ FD + W G + G
Sbjct: 1140 EFEYHVERMLLICNQNLFNVALKKNLQEYIRSKQFDRRSWYPQGLKQKA----------G 1189
Query: 1084 RKIYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQ 1142
+ + K++ADV EA+IGA +LS E
Sbjct: 1190 KAQGAQNSHSLADKSIADVCEAMIGASYLSYADEGN------------------------ 1225
Query: 1143 VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYL 1200
+ +F+ P+LL A H SY +P YQRLEFLGDA+LD +
Sbjct: 1226 ---------------FDMAFKSPALLRSAFKHPSYPRQFESVPN-YQRLEFLGDALLDMV 1269
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
+L+ K+P P +LT+ + A V+N SV+ G ++ +LH S + +I VD+
Sbjct: 1270 CVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVLHFSGVMANQIKDYVDA 1329
Query: 1261 FEKL-----------SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV---FQ 1306
+ S W +V PK L D++E+ GAIFVDSG N V F+
Sbjct: 1330 LTHARQEAEAAAQISGVISQDYWLNVQHPPKFLSDVVEAYIGAIFVDSGYNYSQVQAFFE 1389
Query: 1307 S-IRPLLEPMITPETM-RFHPVRELTEYCQKN 1336
IRP M ++ PV L Q++
Sbjct: 1390 KHIRPFFADMALYDSFASSQPVTTLARMMQQD 1421
>gi|340960215|gb|EGS21396.1| hypothetical protein CTHT_0032530 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1596
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 304/657 (46%), Gaps = 85/657 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQLE E A +QNTI L+TGSGKTLIA +LLR + S VA FLV K
Sbjct: 134 RDYQLELFERAKEQNTIAVLDTGSGKTLIAALLLRWTLQNELENRAKGMSRRVAFFLVDK 193
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRL 136
V LV QQ + + D + K+ G+M D D + W + +++ +V T IL L
Sbjct: 194 VALVLQQHAVLACNLDYPIDKFCGEMIEDVEEDKSFWDKTFAENMAIVCTADILYKCLAH 253
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
SY +++ I +L+ DE HHA+ H YA I+ +FY ++ + PRI GMTASP+ ++V
Sbjct: 254 SYIRMDEINLLVFDEAHHAKKNHTYARIIKDFY---VDVEEDKRPRILGMTASPVDAQV- 309
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
D +LE L+++++ T A + L + A+ + ++D P T L
Sbjct: 310 ----DPKVAAAELEGLLHAQIATAADPAALQYTLTRLKAE-EIVEFDRRPDNWETPLNQR 364
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
L M+ Q E+ K + + +ELG W A + Y
Sbjct: 365 LKML--------------VGQYEVFHKPFAFTETA----CAELGPWCADR-------YWQ 399
Query: 317 DFFAWEQLDGF-GETIIKKFGSDA----SQALVTYVPSGAEWSIGDDSKFN---LDSGLL 368
FF E L ++ G A ++ V+ V + + + +F L + L
Sbjct: 400 LFFREEDLARLEARCEMEILGVSAYRQDTREQVSRVRQA--YDLVKNHEFGRPKLSTDSL 457
Query: 369 TEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
+ K++ L++ L + +D RCI+FV++ TA +L LL + +I G
Sbjct: 458 SSKVIELVKVLRKQFEDPDQDPRCIVFVKQRNTASLLVDLLQQ--------PEMHIEGLK 509
Query: 427 SGIQCQSR-------------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
SG+ S + Q + +FR+G++N I ATS+ EEGLD+ CN++I +
Sbjct: 510 SGMLVGSGRADAHWDNTKVSFRNQVRTIIKFRKGVLNCIFATSVAEEGLDIPDCNVIIRY 569
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSH-AS 530
D + T+ +IQSRGRAR S Y+ MV+ G+ + RL A+ + +R+ E L
Sbjct: 570 DLNETLIQYIQSRGRARRHGSIYIHMVERGNPRHRRRLHENKANEDALRRFCEALPEDRK 629
Query: 531 LPCSPLNNHMY-----GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
L + N + G+ Y V TG ++ ++ + S LP P++ I
Sbjct: 630 LTGNNFNMDYFLRKEMGQQQYIVPGTGAKLNYKQALVILANFVSSLPHPPETVLAPEYVI 689
Query: 586 NKEMG--ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNLLP 638
G C + LP P+++ + + + K +A E C KL + L +L P
Sbjct: 690 CAVPGGFQCEVMLPPQSPVRSATGKVHPRKAMAKCSAAFELCLKLIKGKYLDAHLRP 746
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 232/563 (41%), Gaps = 120/563 (21%)
Query: 922 ELPPELCRIIMAPISLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQ 972
+L P+ C +++ P+ +S YSF P+I+HR++S L+A LD C +
Sbjct: 1027 DLEPKQCFLVLEPLRISPLPAKTAMMAYSF---PAIIHRIESNLIA-------LDACRLV 1076
Query: 973 NVTIPTIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKT 1018
+ I LEA+T H E LE LGD FLK A + +F
Sbjct: 1077 GLDIRPDLALEALTKDSDNTGEHDAEQISFQPGMGNNYERLEFLGDCFLKMATTIAIFTL 1136
Query: 1019 YQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDD 1078
+ E V++ +I N L E KL +IR+ +F N S+ N+
Sbjct: 1137 IPDKEEFEYHVERMLLICNRNLFNNALEFKLEEYIRSMAF----------NRHSWYPNNL 1186
Query: 1079 SLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV--- 1135
+L +G+ I + K++ADV EALIGA L TG + G ++ + V
Sbjct: 1187 TLKSGKTIQPRRTHLLADKSIADVCEALIGAALLTGQDRAGSTAPEQGAFDLAIRAVSTL 1246
Query: 1136 --------------------PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHG 1175
P + + ++ L Y+FR P LL A H
Sbjct: 1247 VKSPRHSMSSYSEYYSLYTPPAWQTAPCSSAQVDMAARFACRLGYTFRHPRLLRSAFQHP 1306
Query: 1176 SY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
+Y + +P YQRLEFLGDA+LD I +L+ ++PG P +LT+ + A V+N
Sbjct: 1307 TYPSVYEHLP-SYQRLEFLGDALLDMAIVEWLFARFPGADPQWLTEHKMAMVSNQFLGCL 1365
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG---------------WESVTSF 1278
G HK+I S ++ K + V E+ L + W + +
Sbjct: 1366 GFMLGFHKNIACCSPQVGKDLARYVAEMEEALLAAKEDAVRAGKTEDDWARDFWLNCSRP 1425
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP--ETMRF-------HPVREL 1329
PK L D++E+ GA+FVDSG N F +R LE I P E MR HPV L
Sbjct: 1426 PKCLPDVVEAYVGAVFVDSGYN----FGEVRAFLERHIRPFFEDMRLYDTFANNHPVTML 1481
Query: 1330 TEY------CQKNHFSMKK----PVASRIS------------GKAAVTVEVQANGRLFEH 1367
CQ+ ++ PVA + G+ V V+ +G+ H
Sbjct: 1482 VAVMQGQFRCQEWRVLARELPAGPVAVALDGEDTTSGGEFGEGETRVVCAVRCHGQTLAH 1541
Query: 1368 TFLDADKKTAKKVACKEVLKSLR 1390
+ A + K A K+ L+ LR
Sbjct: 1542 A-VAASGRYGKVAAAKKALEVLR 1563
>gi|313236326|emb|CBY11646.1| unnamed protein product [Oikopleura dioica]
Length = 1519
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 176/614 (28%), Positives = 291/614 (47%), Gaps = 104/614 (16%)
Query: 829 LCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFD 888
+C+ + H++ P + Y + + ++ +S F ++ +++++Y +R+ + L +
Sbjct: 897 ICSYRRHDA----PTQNRFY-VAEIQYDMDPDSPFPADD--YESFRQYYMQRWALCLTNE 949
Query: 889 REPLLNGRRIFHVQNYL--------------SKCRQQKQKEPSKISFE-LPPELCRIIMA 933
++PLL+ N L S +++QK K + + L PE+ +
Sbjct: 950 KQPLLDVDHTDCRLNLLTPRFVTQKGRALPASALEKKRQKYEDKANRQYLIPEILDV--H 1007
Query: 934 PISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQED 993
P+S S + +PSI+HR+ LL A +L+ + + ++L+ +T K +
Sbjct: 1008 PVSASLWRKAVCLPSILHRITCLLAAEDLRRRISRQTRVD------QILQTLTLSKSSDG 1061
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFI 1053
F+LE LE LGD FLKY+ + L+ Y++ HEG LS + + +SN L +LG +PG +
Sbjct: 1062 FNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKKVSNRNLFRLGVYNDIPGRM 1121
Query: 1054 RTESF----DPKMWIIPGDNSGSYELNDDSLFNGRKIYV-TGRKKVKSKTVADVVEALIG 1108
E F W+ PG Y D + IY + + K++AD +EALIG
Sbjct: 1122 VAEQFMQNDTGGNWLPPG-----YFNKDHAALEKPLIYNHYSDQYLTDKSIADCMEALIG 1176
Query: 1109 AFLSTGGENVGLIFLDRIGIKV--------------------DFVNVPYQRQFQVHAERL 1148
A+L G FL +G+ V P+ + E++
Sbjct: 1177 AYLKATGIEATQQFLCYMGLIVLPSSSCEPETGKPLPPFLLLAPPIEPFHLKSCTQLEKM 1236
Query: 1149 VNVRHLESL----------LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 1198
++ L+ L + Y+F++ L+++LTH SY ++ CYQRLEFLGDAVLD
Sbjct: 1237 QRLQALDKLTRTYGEFEKKIGYTFKNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLD 1296
Query: 1199 YLITVYLYNKYPG--LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI 1256
+LIT +L++ +P SPG LTD+R+A VNN+ +A +VK HK++ + +L+ I
Sbjct: 1297 FLITRHLFD-HPTKRFSPGELTDLRAALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRD 1355
Query: 1257 TVDSFEKLSLGSTFGWESV----------------------TSFPKALGDIIESLAGAIF 1294
V + + G E+V PK LGDI ES+AGAI+
Sbjct: 1356 YVLYCQ--TRQDVEGMEAVLKRIRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVAGAIY 1413
Query: 1295 VDSGCNREVVFQSIRPLLEPMITPETMR--FHPVRELTEY-CQKNHFSMKKPVASRISGK 1351
+DSG N + V+ RP+L+ I ++ P+REL E + FS + R GK
Sbjct: 1414 LDSGMNLDAVWGVYRPMLQKYIDKYSINPPRSPIRELLELEPETAKFSAPE---KRADGK 1470
Query: 1352 AAVTVEVQAN-GRL 1364
VTV + N GR
Sbjct: 1471 YRVTVHIANNKGRF 1484
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILE----EGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+KKQ E + +FR N+++A + E D+ CNLV+ FD S+++ G
Sbjct: 483 KKKQEEALHKFRTREANILIAQAETENEAHRHFDIPKCNLVVRFD---APGSYLRYDGGK 539
Query: 490 RM--QNSD--YLLMVKSGDSTTQSR-------LENYLASGNKMRKEVLSHASLPCSPLNN 538
R+ Q +D Y +++ + R LE YL + + +E A L C L+
Sbjct: 540 RLLSQQNDALYGILINKKEKIQFCRMLEEFKMLEEYLKNRASLAEEA-GPAEL-CLDLDV 597
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT---PKFHINKEMGICTLY 595
ED + + ++ +S+SL+ YC+RLP D + + + + +L
Sbjct: 598 THLFEDMPKMRPQIKL-SMQNSLSLLNKYCNRLPCDSFTQLSVLRKTLQLANGKFQTSLV 656
Query: 596 LPNNCPIQTVIAQGNIKTL---KQAACLEACKKLHQIGALTDNLL 637
LPNN ++ ++ +T K++A LEAC KL +G L D L
Sbjct: 657 LPNNSHLRGIVVGHPKETAELSKRSAALEACTKLRILGELDDFLF 701
>gi|340712553|ref|XP_003394821.1| PREDICTED: endoribonuclease Dicer-like [Bombus terrestris]
Length = 1488
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 256/1008 (25%), Positives = 430/1008 (42%), Gaps = 168/1008 (16%)
Query: 6 MESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
ME+D E + R YQ++ E A K+N I++L TG+GKT IA+ML++ + +R+
Sbjct: 1 METDIREFI-------PRPYQIDLFEIACKENVIIYLPTGAGKTFIAVMLIKELSADIRR 53
Query: 66 PSPFVA---VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
P +F+V V LV QQ++ IK T L G + GVDFW W E ++ HEV
Sbjct: 54 PYAEGGKHTIFIVNTVPLVIQQSDYIKRLTGLSCGTLSSEEGVDFWHDEEWNEHLNNHEV 113
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
LVMT QIL++ L Y LN I ++I DECH A H IM F + E PR
Sbjct: 114 LVMTSQILVNALCHGYMFLNRINLIIFDECHRAVNDHPMRQIMQLFENCPKEEQ----PR 169
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTC--ASESVLSNFIPFSTAKFKFY 240
+ G++AS + + V + + LE N+++ T A +S ++ I +F +
Sbjct: 170 VLGLSASLLNANVRLEKVQ--SVMQSLEVTFNARIATATVADKSYYASPIE-EIIQFDQH 226
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAEL----IRKKVSKINSTLLYCL 296
D + + ++ E+ I L +NL NE+ AE I KK+S I + Y
Sbjct: 227 VIDNVGECI-NNIIKEVESI-LNCAVLKDNLKYNESSAEFRPKTISKKLSCILRNIQYHF 284
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV-------PS 349
G++ A K QL+ ++I + L+T V
Sbjct: 285 LRTGIYGASKCV---------LLHLIQLEYLKKSIDDVETLYILEYLITKVINCRKLLED 335
Query: 350 GAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRC-IIFVERVITAIVLQSLLS 408
+ S + +N S + +K+ +++ + + + C IIFV+R TA +L +L
Sbjct: 336 KMKGSPEKERIYNYSSDQI-QKLFKVLKDFYNNKHSDQVFCCIIFVQRRFTAKILYQILK 394
Query: 409 E--LLPRHCTW-KTKYIAG-------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
+ C + +++ G N+ + C S + + E++ FR G +N IVAT ++
Sbjct: 395 SVSIYDEECKFLHPEFVIGVSSNPFRNSKELLCVSERNK-EVLLRFRNGSLNCIVATDVI 453
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
+EG+DV C+L+I +D V ++IQS+GRAR S Y+++++S DS R Y
Sbjct: 454 DEGIDVPKCSLIIRYDLPMDVRTYIQSKGRARHAYSRYVVLLQSDDSQYLRRHNEYKKIE 513
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYH-VESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
+++ ++ P N + E + H +E I+ DG
Sbjct: 514 QHLKQLLVDKTDERNLPTENEIQSELYQHDIEPYQVIS-----------------DDGQI 556
Query: 578 KPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK-QAACLEACKKLHQIGALTDNL 636
I ++M I ++I Q LK + ACL L +I
Sbjct: 557 -----CCITEQMAI------------SIINQYCTSLLKSKFACLSPIWTLRKIS------ 593
Query: 637 LPDIVVEKHDAQKRGNEPYNAEHPIY-FPPELVNQSPQDTKITYHCYL-----IELKQHF 690
E H P+Y FP L P KITY L + H
Sbjct: 594 ------ENHV-------------PMYQFPSALYGAFPLPRKITYLHILHATPKYPVPHHD 634
Query: 691 NYDISARNIVL------AMRTELESEIKKVNFDLEVERGRLTVNLK-HLGRIQLIPNQVL 743
N ++ N++ + T+ +I +F + + G L +++K + ++ L +V+
Sbjct: 635 NRYLTFYNLLHNSAGFGILSTKQMPQIP--SFPIFMRVGELNIDVKVNHAKMILTEEEVI 692
Query: 744 LCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEID--YLLLPSTGQLIDWKTVATVLF 801
+RF +F I+ ++ F + DN D +L++P DW
Sbjct: 693 YLKRFHTLIFSDIVS--------VIKTFMVFDNCNRDNCFLIVPVNE---DWDI------ 735
Query: 802 PRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHN---GQIYCITGVLGHLN 858
N + +N+ + S P C L N Y +T V +
Sbjct: 736 --------NWEVTKQYNSIEYISPSVPFCFKSSDYELALVKPNYRAADTYIVTQVCDDIT 787
Query: 859 ANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK 918
+S F ++ S TY +Y+E++ +++ +P+L + I +Y+ + K E K
Sbjct: 788 PSSCFPTDHFS--TYIHYYKEKHRLEINNLEQPMLEVKSISRAIDYIMP--RDKSTESKK 843
Query: 919 ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 966
L PELC I P + T +PSI+HR+ LL+A +L+ ++
Sbjct: 844 --EHLVPELCIRINFPALY--WLKATTLPSILHRVSQLLIAEDLRYVI 887
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 194/416 (46%), Gaps = 76/416 (18%)
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
TK + F+LE LETLGDS+LK+ S L+ + + EG L+ K +II N L G +
Sbjct: 1017 TKTGHDAFNLERLETLGDSYLKFITSLFLYNEFPKHSEGYLTALKGKIIGNRNLYYCGIK 1076
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLF------------------------- 1081
+ +PG ++ +SF P I + ++ D L+
Sbjct: 1077 KNIPGCMKVDSFIPLSNFIAPAYTVYRQVQDVLLYAKVSPNVLYEIEIPRDEQLCGNISE 1136
Query: 1082 -------------------NGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 1122
G + Y+ G + V KTVAD VEALIG +L + G LI
Sbjct: 1137 ATKNAIQAKILDWEAAEAQTGMEHYL-GIQTVSDKTVADCVEALIGVYLRSMGIKDTLIL 1195
Query: 1123 LDRIGI---KVDFVNVPY-QRQFQVHAERLVN-----VRHLESLLNYSFRDPSLLVEALT 1173
L I K+D + + Q + +E VN ++E+ L Y F + L++A T
Sbjct: 1196 LQWFQILPHKIDANELLFGTPQNPIISEGNVNHLMPWASNIETKLGYQFNNRGYLLQAFT 1255
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
H SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA VNN +A
Sbjct: 1256 HPSYTPNNMTECYQRLEFLGDAILDFLITNYIYESCGNLNPGALTDLRSALVNNITFACL 1315
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKL------SLGSTFGW----------ESVTS 1277
+V+HGLH +L + ++N ++ F K ++ W
Sbjct: 1316 TVRHGLHIALLSYA----PKLNNVIERFVKFQEERNYAVNDELLWILLEEDECNMAEHVD 1371
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTE 1331
PK LGDI ES+ GAI++DS N VV+ + ++ I + + P+R L E
Sbjct: 1372 VPKVLGDIFESVIGAIYLDSNKNLSVVWNIVYSIMHKEIDEFSKNIPKQPIRVLYE 1427
Score = 47.8 bits (112), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALT---HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
V V H+ SL DP +V ALT H ++ L +RLE LGD+ L ++ +++L
Sbjct: 993 VPVLHILSLKCSYGPDPGQIVYALTKTGHDAFNL-------ERLETLGDSYLKFITSLFL 1045
Query: 1206 YNKYPGLSPGYLTDMRSASVNN 1227
YN++P S GYLT ++ + N
Sbjct: 1046 YNEFPKHSEGYLTALKGKIIGN 1067
>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum
commune H4-8]
Length = 1342
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 177/653 (27%), Positives = 295/653 (45%), Gaps = 68/653 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E A N I L+TGSGKT I +ML++ A + + VFLVP+V LV
Sbjct: 1 RQYQEEIFRQAQAGNRIAALDTGSGKTYIGLMLIKWIASQPQNKDKLI-VFLVPRVALVE 59
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ I ++ L+V + G +D D W + +VLVMT QI LD L S++ +
Sbjct: 60 QQGNFIAANSTLRVTQKHGQNALDMADREGWAAVFATSDVLVMTAQIYLDLLTHSHWSIA 119
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
++I DECHHA+ Y IM E+ H PR+FG+TASPI +
Sbjct: 120 HTSLIIFDECHHAQKNDPYRQIMDEYRH----CAPGQRPRVFGLTASPIWDARNPG---- 171
Query: 203 WQKIHDLETLMNSKVYTC---ASESVLSNFIPFSTAK-FKFYKYDEIPHALYTHLADELA 258
+ + LET ++++V A E P K ++ +E+ + +
Sbjct: 172 -KALAALETKLDAQVVGVRLHAGELDAHTARPREVIKTYRALDPEEVGRGSFPGMGRS-- 228
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTL---------LYCLSELGVWLALKAAE 309
+E+ T E D+ + RK + + + TL LY EL +A +
Sbjct: 229 -VEVFGTLDWEGADV------MWRKIMGRYDVTLASLGPYCASLYLYQELSDIVARLRPQ 281
Query: 310 TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT-------YVPSGAEWSIGDDSKFN 362
+ +E D G + K ++ L+ Y P ++ + D
Sbjct: 282 AETAFER-----AADDPAGSSTTGKMSLAHARCLLAIEDILTDYEPYFSDLAASD----A 332
Query: 363 LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
L + K+ L++ LL + + R I+FV++ A+ L +L L +
Sbjct: 333 LLDDWFSPKVHALVDVLLA-QDLATSRGIVFVDQRQVALCLALILPRLSRLQGLVRCASF 391
Query: 423 AGNNSGIQC-QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
G N GI ++ Q ++ +FR G VN+++ATS+ EEG D Q+C+LV+ FDP + +
Sbjct: 392 IGQNPGIDGPKAIGSQRDVASQFRSGEVNLLIATSVAEEGHDFQACDLVVRFDPLQHLVG 451
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
++QSRGRAR ++S +++M+ GD ++++ + + ++R+ + ++ + +N
Sbjct: 452 YLQSRGRARNKSSMFVVMLPEGDEPSRAKYDFFRKCEPQLREVYNTRSAEDATSVNVDDD 511
Query: 542 GEDF----------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI 591
E+ + V STG I T +++ L+ CS +P D F P P + I
Sbjct: 512 AEELSPEMLAERERFVVPSTGAILTYDNAIGLLGHLCSLIPRDP-FSPPPAPVYTGDF-I 569
Query: 592 CTLYLPNNCPI--QTVIAQGNIKT----LKQAACLEACKKLHQIGALTDNLLP 638
T+ LP + P+ ++ QG K K++A + LH LLP
Sbjct: 570 STVQLPRSIPLPPAELVFQGATKATKKEAKRSAAFRTVRYLHAKDVFDAYLLP 622
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 212/467 (45%), Gaps = 37/467 (7%)
Query: 935 ISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK---VLEAITTKKCQ 991
+S + +PS++ R + A D + +P I+ +++A+T
Sbjct: 888 LSEDILSALHILPSLLRRATDVYRA--------DRARLALGLPYIERDLLIQALTLPCAG 939
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
F+ + LETLGD+ L+ + + LF Y + HEG L+ ++ ISN L E +L
Sbjct: 940 MPFNNQRLETLGDAVLELSTTVHLFNKYPHRHEGQLTPLRQICISNKCLLTRAREVQLER 999
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFL 1111
F+ +E+ +W + +DS R R+ +++ D +EA++GA
Sbjct: 1000 FLTSETHSLSIW----------DYVEDSEVPAR----CARRLFPRRSLQDCMEAILGASY 1045
Query: 1112 STGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV-RHLESLLNYSFRDPSLLVE 1170
TGG + L +G+ +R + ++ L++ L Y+FRD LL E
Sbjct: 1046 LTGGIDTALHAGTALGLAFGGSVPWPRRYPRRRRVPTPDLFSELQAKLGYTFRDGGLLCE 1105
Query: 1171 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY 1230
ALTH S+ + Y+RLEFLGDAV++ + YLY K+P + L+ R+ +V N
Sbjct: 1106 ALTHSSFASLDSYGSYERLEFLGDAVINLAVVDYLYRKFPDANSDQLSLPRARAVCNQAL 1165
Query: 1231 ALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTF--GWESVTSFPKALGDIIE 1287
+ SVKH LHK +L + EL IN E GW+ PK L DI E
Sbjct: 1166 SALSVKHLQLHKSVLVNNVELSIAINKHAPILEDKPYPEILVKGWK--LDPPKVLSDIFE 1223
Query: 1288 SLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVA 1345
S+ GA+FVD+G + E+ + +E ++ M PV EL + K+ + ++ +
Sbjct: 1224 SIVGAVFVDTGYDYEITAAVVEQAMEGLLVHLSPAMPRDPVSELIIWVAKS--TCREQIE 1281
Query: 1346 SRISGKAAVT--VEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
R + + + +G L + ++K+A + L LR
Sbjct: 1282 FRFVRRKQYPDGIAIYLHGTLLAGPITTMNHLVSRKLASERALADLR 1328
>gi|121807816|sp|Q2VF18.1|DCL2_CRYPA RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL-2; Includes: RecName:
Full=ATP-dependent helicase DCL-2
gi|77632776|gb|ABB00357.1| dicer-like protein 2 [Cryphonectria parasitica]
Length = 1451
Score = 203 bits (516), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 194/666 (29%), Positives = 312/666 (46%), Gaps = 81/666 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQLE LE +LK+N I ++TGSGKT +AI LR A L P V FL P V L
Sbjct: 63 ARAYQLEMLEASLKENIICAMDTGSGKTHVAI--LRIKAELEEMPEGQVVWFLTPTVSLC 120
Query: 82 PQQAEAIKMHT-DLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ +K ++ G VD W TW + +V++ TPQ+LLD L +
Sbjct: 121 AQQYAVVKAQIPSVQTKIVTGADKVDSWSSTTWDGALLNVKVIITTPQVLLDALLHGFVN 180
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP-IKSKVSSSE 199
++ + +++ DE HH H Y+ +M EFY +T +PRI G+TASP ++S +SS
Sbjct: 181 ISSLALMVFDEAHHCNKNHAYSRVMKEFYWE-SKTKHEPVPRILGLTASPVVRSDISS-- 237
Query: 200 QDYWQKIHDLETLMNS--KVYTCASESVLSN------FIPFSTAKFKFYKYDEIPHALYT 251
+ LE+ +++ + T E +++N F K + Y +L
Sbjct: 238 ------LKRLESTLDAVCRSPTRHREELIANSQRPALFSIIYNPKLQPYAAG-FSESLTK 290
Query: 252 HLA--DELAMIELKHTRSLENLDLNEAQAEL---IRKKVSKINSTLL-YCLSELGVWLAL 305
+A ++L ++E + SL + ++ +L I++K + + T+ +C ++
Sbjct: 291 LMAARNKLNILEDPYVVSLRAEISDRSRRKLEKAIKEKRTYVQDTMKSFCRR------SM 344
Query: 306 KAAETISCYESDFFAWEQLDGFGETIIKKFGS-----DASQALVTYVPSGAEWSIGDDSK 360
+ A+ + + +D+F E + F I ++ S DA + V A +I
Sbjct: 345 EMAKELGAWAADWFISEAIRLFLAGIYRQGASSKSFRDAEVIFLARVFQDA--NIEPPPP 402
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
SG L+EK+ +IE LL Y +D R I FV+ T +V LS +L H +K
Sbjct: 403 LTTHSG-LSEKVQRIIEVLLNYD--KDARAICFVKERATTVV----LSHILTTHPEVSSK 455
Query: 421 YIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+ G G K++ + +E FR G N++VATS+LEEG+DV +CNL+
Sbjct: 456 FRIGTMVGTSFVPGVKRDFLDLPETGGSQCLEAFREGRKNMLVATSVLEEGIDVPACNLI 515
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS 530
I FD + +FIQ RGRARM+ S L V+ LE + + E H
Sbjct: 516 ICFDKPNNLRAFIQRRGRARMRQSHLYLFVEDEAEADWEALEAQMKL--QYEDEKREHER 573
Query: 531 LPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
L + + + VESTG T++ + S + + S L S + + P + I K
Sbjct: 574 LEAIENSEALDYPEELRVESTGARLTINDAKSHLQHFVSTLASRKFVQTQPDYLIEK--- 630
Query: 591 ICTLYLPNNCPI--QTVIAQGNI-KTLKQA-----------ACLEAC----KKLHQIGAL 632
+ Y P + P+ TV+ ++ + L+Q AC++A K L++ G +
Sbjct: 631 VSQGYQPGDQPLLKATVLLPVSVPQALRQVTSSRTWVSEKNACMDAAFQAYKALYEAGLV 690
Query: 633 TDNLLP 638
D+LLP
Sbjct: 691 DDHLLP 696
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 168/654 (25%), Positives = 265/654 (40%), Gaps = 125/654 (19%)
Query: 824 TKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNN----------GSVTTY 873
+KSGPL ++ GQ+ G++ N +S R+ SV
Sbjct: 831 SKSGPLSMEQL----------GQVEFAPGLVTA-NGSSYLVRDERDQSRHPYYFESVLPS 879
Query: 874 KKHYEERYGIQLCFDREPL----LNGRRIFHVQNYLSK-CRQQKQKEPSKISFELPPELC 928
K E + FD +P L+ R+ + + C Q ++ LP E
Sbjct: 880 KPPAESIRKVYRGFDEDPTEATYLSVRKWPKKTGFFHRPCSPQHSPSTKPYAYILPAETT 939
Query: 929 RIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVLEAITT 987
+ P+ + +PS++ + L+A L + +L + NV++ ++EAI
Sbjct: 940 TVDRIPLVYAQM--GLLMPSLVCYTELYLVAAELSRKVLAPLRISNVSM----LVEAICA 993
Query: 988 KKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
K + + E +E LGDS LK + L T + EG+LS+ K+R++SNA LC+ C+
Sbjct: 994 KSARTPENYERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDA 1053
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALI 1107
+L F+ T+ K W P + + + + ++ + KT+ADVVEALI
Sbjct: 1054 ELDQFLVTQQLVTKGWQPPYMSDLAKQDQEPE----------SKRILSPKTLADVVEALI 1103
Query: 1108 GAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERL------------VNVRHLE 1155
G GG L + R+ F+ R F + L +++ LE
Sbjct: 1104 GVSFVDGGLPKALECI-RL-----FIPESQPRPFSEVRDILFGAAEPKGMKLPADLQLLE 1157
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
L+ YSF + +LLVEA+TH SY + CY RLEF+GDA+LDY+I ++ P L
Sbjct: 1158 QLIEYSFCEKALLVEAVTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEPALENW 1217
Query: 1216 YLTDMRSASVNND------------------CYA-----------------------LSS 1234
+ +R+A VN D C A +
Sbjct: 1218 QMHLLRTALVNADILGFLIMEWSYKQMGFEVCRANEGDSDSKSSGDSTSDKASPRLEQTE 1277
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKAL----------GD 1284
V L + +S EL IT FE+L S T +P AL D
Sbjct: 1278 VPIPLWSFMRQSSAELTMEREITKARFEELRDPILEAMRSGTHYPWALFARLHAQKFYSD 1337
Query: 1285 IIESLAGAIFVDSG-----CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC--QKNH 1337
E+L GAI+VD+G C V + P L+ ++ + HP EL ++
Sbjct: 1338 FFEALVGAIWVDAGPGFDACRAFVARSGVLPYLKRLLRDQVHVLHPKEELGRLAGRERVE 1397
Query: 1338 FSMKKPVASRISGKAAVTVEVQANGRLFEHT----FLDADKKTAKKVACKEVLK 1387
+ +K+ + GK EV+ GR F + + A AC E+LK
Sbjct: 1398 YVVKETLKDDGDGKEW-ACEVRVGGRYVTDVTGCLFKEESRVKAATQAC-EILK 1449
>gi|371496114|gb|AEX31636.1| Dicer 2 [Aedes albopictus]
Length = 821
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 209/820 (25%), Positives = 364/820 (44%), Gaps = 119/820 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ +++NTI++L TG+GKT IA+M ++ L KP F+V V
Sbjct: 14 RDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNTVA 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQAE + + Y D VD W W +E +K +V+V T QILLD L+ Y
Sbjct: 74 LAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHGYL 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ I +LI DECHH G+H IM +F L S+ PR+ G++ + ++ + +
Sbjct: 134 SIKHINLLIFDECHHGVGEHPMHGIMEQF----LRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST-AKFKFYKYDEIPHALYTHLADELA 258
Q ++ LE NS + T S + FST K YD + L + D +
Sbjct: 190 Q-VSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSL--RLSPVMVDIVR 246
Query: 259 MIELKHTRSLENLD----LNEAQAELIR------KKVSKINSTLLYCLSELGVW------ 302
IE ++++ + LN+ +A L++ K++ K+ + L+Y L + G++
Sbjct: 247 SIE-AFSQTINDFHLPKYLNQNKA-LMKDRPKPLKEIKKLFTELVYQLGDTGLFGCSIAL 304
Query: 303 LALKAAETISCYESDF----FAWEQLDGFGETI---IKKF--GSDASQALVTYVPSGAEW 353
L L + +SD A F E++ I+K G D + L +
Sbjct: 305 LGLIVQFELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTRF------- 357
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
S L +++ +E + E + + ++FV+R +A VL +L +
Sbjct: 358 -----------SSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLKIYFSQ 406
Query: 414 HCTWK---TKYIAGNNSGI-----QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
++ G+N + Q S KK ++E F+R NVIV T++LEEG+D+Q
Sbjct: 407 TEDADLILPDFMVGSNGSMPESIEQILSAKKDRRVIERFKRNETNVIVTTNVLEEGIDLQ 466
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL---ASGNKMR 522
CN VI +D +T S+ QS+GRARM++S Y++M+ + + Q LE Y + +++
Sbjct: 467 MCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNEER--QKFLEKYRLYKSIEQELQ 524
Query: 523 KEVLSHASLPCSPLNNHMYGEDFYHV-----ESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
+ ++ PL+ ++ E + + + G S+V L+ YC +P D +
Sbjct: 525 RCLIGKTINRPDPLDADVHKELYNEIIPPFFTAKGAKLDALSAVQLLNRYCMGMPRDAFT 584
Query: 578 KPT---PKFHINKEMGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGA 631
+ + + + LP ++ I NIK K++A AC+KL++
Sbjct: 585 NTNVTWERVDLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKE 644
Query: 632 LTDNLLP-----------DIV------VEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQD 674
L+++L+P D+ ++ + G + H I +P + P+
Sbjct: 645 LSEHLIPIDCRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTTGCFPEP 704
Query: 675 TKITYHCYLIELKQHFNYDISARNIVL------------AMRTELESEIKKVNFDLEVER 722
K Y Y++ + F D S N+ + M T+ + K+ F V
Sbjct: 705 GKPCY-IYVLRIGAGFEQDPSNENVNIFHSLYNSENNFGIMTTKPLPVLAKMKF--FVTL 761
Query: 723 GRLTVNLKHLGRIQLIPN-----QVLLCRRFQITLFRVIM 757
G + V+L + +PN ++ L R+F IT+FR ++
Sbjct: 762 GLINVHLVETPIV--LPNAGSEVELALLRQFHITVFRDVL 799
>gi|47210542|emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1479
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 210/767 (27%), Positives = 323/767 (42%), Gaps = 171/767 (22%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
+E D + R YQ+E LE AL+ NTIV L +GSGKT IA++L + ++ +R P A
Sbjct: 25 QEAIHDNIYTPRKYQVELLEAALEHNTIVCLNSGSGKTFIAVLLTKELSHQIRGPYSGTA 84
Query: 72 ---VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH-------- 120
VFLV V +QA A++ H+DL+VG+Y W W E++++
Sbjct: 85 KRTVFLVNTAASVVEQAAAVRTHSDLQVGEYSDSERTTTWTDQHWSREIAENQHSDGSSF 144
Query: 121 -----------EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY 169
+VLVMT I L L +L+ I +++ D+CH A H Y IM F
Sbjct: 145 SDRVSLRLSVKQVLVMTCHIFLYILTRKILRLSKINLVVFDDCHLAIADHPYCEIMKYF- 203
Query: 170 HRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
G ++ PRI G+TAS + K S D +KI +LE + S T VL +
Sbjct: 204 -----EGIASSPRILGLTASILNGKCDPS--DLEEKIQNLERTLKSNAETATDLVVLDRY 256
Query: 230 IPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-I 288
++ + D P+ + L L + R L + +++ A+ + +SK +
Sbjct: 257 ----ASQPREVVLDCGPYLDRSGLCSRLQAELDEALRFLNDCNISVAREDHNPTFISKQV 312
Query: 289 NSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLD------GFGETIIKKFGSDASQA 342
L L LG W A KAA + + EQ + F +TI++K + +
Sbjct: 313 LGDCLAVLQVLGPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEH 372
Query: 343 LVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE---------------- 386
S +LD +T K++ L+E L EY+ E
Sbjct: 373 F---------------SPTSLDLKFVTPKVLRLLEILREYKPFERQQFESVEWYNNRNQD 417
Query: 387 --------------------------------DIRC-IIFVERVITAIVLQSLLSELL-- 411
+I C IIFVER TA+VL L+ E
Sbjct: 418 NYVSWSDSEDEDEDEDAEAKERPEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGEQ 477
Query: 412 -PRHCTWKTKYIAGNNSGIQCQSRKKQNE------------------------------- 439
P + +I G++ G + Q R KQ E
Sbjct: 478 DPELAYISSNFITGHSIG-KYQLRNKQMEVEFRKQEEVRRRSADQGRPGPPLTPVPPTSP 536
Query: 440 -------------IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+
Sbjct: 537 TWSGRVVESCFPQVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK 596
Query: 487 GRARMQNSDYLLMVKS-------GDSTTQSRLENYLASGNKMRKEV-LSHASLPCSPLNN 538
GRAR S+Y+++ S D TT +E L NK K V +S + ++
Sbjct: 597 GRARAPVSNYIMLADSERTKAFEDDLTTYKAIEKILR--NKCSKSVEVSEFEVEQVFDDD 654
Query: 539 HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK---FHINKEMGICTLY 595
+ E G T+++++ I YC+RLPSD + PK + LY
Sbjct: 655 CIIPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELQNGHFQSRLY 714
Query: 596 LPNNCPIQTVIAQGNI----KTLKQAACLEACKKLHQIGALTDNLLP 638
LP N P++ V +G I + ++A L C+KLH+IG L D+L+P
Sbjct: 715 LPINSPLR-VPVKGPIMNCVRLAEKAVALLCCEKLHKIGELDDHLMP 760
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1352 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1411
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1412 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1445
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 1368 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1408
>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
Length = 1442
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 189/678 (27%), Positives = 302/678 (44%), Gaps = 105/678 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS--PFVAVFLVPKVVL 80
R YQ E + A+ +N I ++TGSGKT IA+MLL+ L S VAVFLV V L
Sbjct: 21 RLYQQEIFQRAVNENVICAMDTGSGKTQIAVMLLKHIMSLRPADSNPKKVAVFLVASVPL 80
Query: 81 VPQQAEAIKMHTDLKVG----------------KYWGDMGVDFWDGATWKEEMSKHEVLV 124
QQ + ++ L V K++G MGVD+WD W + ++ +V+V
Sbjct: 81 AEQQGDFLESQLPLHVNVRPVFLLLAGAYADGQKFYGAMGVDYWDRERWAKAFAESDVMV 140
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIF 184
MT Q+ D L +++ + D+ HH H YA IM YH S PRIF
Sbjct: 141 MTAQVFHDLLNHAHWSI--------DKAHHCNKNHVYAQIMRTHYH---HCPVSERPRIF 189
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY---- 240
GMTASPI + + + Q + L+ M++KV ++VL + + K + +
Sbjct: 190 GMTASPIFNIRNPA-----QSLAQLQETMDAKVL-AVKDNVLE--LALNAPKPQEFVMEC 241
Query: 241 -----KYDEIPHALYTHLADELAMIELKHTRSLENL---------DLNEAQAE-----LI 281
Y + P + E + L++L +L A+ I
Sbjct: 242 PPPSSDYSDYPRPTMWSVVSEFENLLFPDPDDLKDLTSRYKHALNELGPLAADYFVLLFI 301
Query: 282 RKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQ 341
R+ + K ST+ SELG + + ++ + G + + SD
Sbjct: 302 RRAIEK--STV--GSSELGAYFSRASSLA-----------PETGGDSSPVAGQTWSDLDN 346
Query: 342 ALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAI 401
A ++ + E + G D + LT K+ LI S+LE +D +IFVE+ A
Sbjct: 347 AYNEHLATIQERARGLDKSQMM--SWLTPKLKILI-SILEANRADDFSALIFVEQRQVAS 403
Query: 402 VLQSLLSELLPRHCTW-KTKYIAGNNSGIQC------QSRKKQNEIVEEFRRGLVNVIVA 454
L LL L+P W K + G+ G + + Q V FR G +N+++A
Sbjct: 404 ALAWLLP-LVPELRDWVKAAALVGHGDGSRAGFEGSGMAHAAQRSTVRNFRSGSINLVIA 462
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
TS+ EEGLD Q+C LV+ D +T+ ++QSRGRAR +S Y+++ D R +
Sbjct: 463 TSVAEEGLDFQACKLVVRLDAPQTMVGYLQSRGRARKHDSAYVVLT---DPEGAKRYRGF 519
Query: 515 LASGNKMRK------EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYC 568
+ +R+ E + + Y V+STG + T S+++ L++ +C
Sbjct: 520 RGAEPHLRRIYQRISEEEAQQDGEMDVEEEEDVDNERYVVKSTGAVVTPSTAIGLLHLWC 579
Query: 569 SRLPSDGYFK-PTPKFHINKEMGICTLYLPNNCPIQTVIA---QGNIKT----LKQAACL 620
S+L D + K P P+FHI + +C + P C + ++ G +K ++AA
Sbjct: 580 SQLEVDRFTKPPAPEFHITGKY-MCKISAP-PCILNPALSGPIHGPLKKTRDGARRAAAF 637
Query: 621 EACKKLHQIGALTDNLLP 638
+KLH++ D LLP
Sbjct: 638 LFVQKLHKLEIFDDYLLP 655
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 239/509 (46%), Gaps = 42/509 (8%)
Query: 910 QQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH 969
+Q +PS+I P + RI +PI T +P+++ ++ L + K +L
Sbjct: 918 EQPTAKPSQIV--TPSHMARI--SPIPADIVRIVTHLPNLLGQMTVLFRIDSAKEIL--- 970
Query: 970 CMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSV 1029
+ +P +LEA+T Q F + LET+GDS LK + LF YQ +HEG LS
Sbjct: 971 --RTNGVPLELLLEALTLPSVQAGFDYQRLETIGDSVLKVSMCTHLFIKYQGHHEGQLSA 1028
Query: 1030 KKERIISNAALCKLGCEQKLPGFIRTESFDP-KMWIIPG--------DNSG----SYELN 1076
K+ ++SNA L ++G + L F+ T S + W P D+SG S E
Sbjct: 1029 MKDSVVSNANLMRVGRQSPLSRFLITGSMPTRRTWSPPASPTISETQDDSGEQDDSNEQK 1088
Query: 1077 DDSLFNGRKIYVTG----RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF 1132
DDS N +K + + +K++AD E+ +GA + G L + +G+ +
Sbjct: 1089 DDS--NEQKENDSKGEFEKTSFHTKSLADCTESTLGATYLSRGVEAALEVGEALGLPLGG 1146
Query: 1133 VNVPYQRQ----FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
+ R+ F +E + +E L Y F++ SL+ EA TH +Y L + P Y R
Sbjct: 1147 TTPWHLRREVDVFARKSEITMLFAPVEEKLGYKFKNASLVAEAFTHTAYDLSQGP-SYNR 1205
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGD++ D + ++Y K+P ++PG ++ RS VN + +V LHKHIL +S
Sbjct: 1206 LEFLGDSLFDLYVVKFMYLKFPKMTPGQMSWARSRLVNASTFGKLAVGLELHKHILTSSA 1265
Query: 1249 ELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
L K + E++SL PKA+ D+ E++ GAI+VDS N E+ F+ I
Sbjct: 1266 NLQKAVASFAQEVEEISLEEILQICWKIDAPKAISDVFEAIFGAIYVDSSFNLELTFEHI 1325
Query: 1309 RPLLEPM---ITPETMRFHPVRELTEYCQKNHFSMKKPV----ASRISGKAAVTVEVQAN 1361
++ + +TP M+ P EL + + +S TVE +
Sbjct: 1326 HRVMANIMEYVTP-VMQGDPTSELVRWVASQGCEAQGSTIFSSSSNSRASTNDTVETTVH 1384
Query: 1362 GRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
GR A K A+ +A ++ L L+
Sbjct: 1385 GRTISRV-TAATSKLARPMAAEQALNILK 1412
>gi|242008637|ref|XP_002425109.1| dicer-1, putative [Pediculus humanus corporis]
gi|212508774|gb|EEB12371.1| dicer-1, putative [Pediculus humanus corporis]
Length = 471
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 229/470 (48%), Gaps = 88/470 (18%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E+L+ LGDSFLK++ S LFKTY + HEG+L+ K +++ N L G + LP FI T
Sbjct: 9 ENLKILGDSFLKFSCSFFLFKTYPSLHEGILTNVKGKLVGNKNLLDCGVAKNLPNFINTN 68
Query: 1057 SFDPKM-WI----------------------------IPGDNSGSYELNDDSLFNGRK-I 1086
F P W IP + L+++++ + RK I
Sbjct: 69 DFSPNFDWNPPLFSTPEVLLNYIVSKNMDPSIISRLEIPQKECLTGILSEETIESNRKLI 128
Query: 1087 YVTGRKK---VKS----------KTVADVVEALIGAFLSTGGENVGLIFLDRIGI----- 1128
G KK VKS KT++DVVEALIG +L GG G L+ GI
Sbjct: 129 DEEGVKKLGLVKSPFLNTELMSDKTISDVVEALIGVYLLNGGLAGGFKILNWFGILPESN 188
Query: 1129 -----------KVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
+V+ VN + + V LE L Y+F+ LL+EA+TH SY
Sbjct: 189 GTYEEIMKKPVRVNDVNDEESAVMTILGD--VFYTDLEETLGYTFKRKELLLEAITHPSY 246
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
+ + CYQRLEFLGDA+LD+L+TVY+ + ++PG +TD+RSA VNN A SVK+
Sbjct: 247 VRNRLTPCYQRLEFLGDAILDFLVTVYIQENFKDMNPGLITDIRSALVNNSTLACLSVKY 306
Query: 1238 GLHKHILHASHELYKRINITVDSFEKLSLGSTFG----------------WESVTSFPKA 1281
HK++L+ S L N +++F K+ + + ESVT PKA
Sbjct: 307 DFHKYLLYTSSPL----NKCIENFVKIQISNNHAVNEQALITLEENDAIMAESVT-VPKA 361
Query: 1282 LGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR--FHPVRELTEYCQKNHFS 1339
LGDI ESLAGAIF+DS + E V+ +++ + T+ VR L E C + F
Sbjct: 362 LGDIFESLAGAIFIDSENSLETVWNVFYKIMKKELDEFTVNPPKTAVRVLHEICGEKPFF 421
Query: 1340 MKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
+S K ++ + + + H F D +KK AKK ACK LK +
Sbjct: 422 ETTVYEKVVSVKCSIYYK---DEEIVAHGFGD-NKKDAKKSACKMALKQI 467
>gi|241061228|ref|XP_002408100.1| dicer-1, putative [Ixodes scapularis]
gi|215492369|gb|EEC02010.1| dicer-1, putative [Ixodes scapularis]
Length = 2050
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 240/503 (47%), Gaps = 101/503 (20%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ T+ + HEG LS + R IS
Sbjct: 1550 PSI-LLQALTMSNANDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLSHLRSRQIS 1608
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPK-MWIIPG------------------------DNSG 1071
N L +LG ++L G + F+P W+ PG +G
Sbjct: 1609 NLNLYRLGRARRLGGLMVATKFEPSDNWLPPGYVVPPGLERALIESGLPAGHWNIGALAG 1668
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-----------------------------KTVADV 1102
+++++ + R+ RKKV++ K++AD
Sbjct: 1669 LTQMDEEEI---RQTLAERRKKVRNLEEVLAEESGLDAAPYVPYNLLTQHSIPDKSIADC 1725
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKV----------DFVNVPYQRQFQ---------- 1142
VEALIGA+L + G L+F+ +G++V V+ P R +
Sbjct: 1726 VEALIGAYLVSCGPRATLLFMSWLGLEVLPRDRTAEALRDVSAPLYRTLESPLVSPDDGS 1785
Query: 1143 VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
A+ L E+ + Y FRD + L++A TH SY + CYQRLEFLGDAVLDYLIT
Sbjct: 1786 ALAQLLSGYDAFEARIGYRFRDRAYLLQAFTHASYHYNRLTDCYQRLEFLGDAVLDYLIT 1845
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV---- 1258
+LY+ SPG LTD+RSA VNN +A +VK+ H++ + S L+ I V
Sbjct: 1846 RHLYDDPQRHSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKNVSPGLFAVIQRFVETKC 1905
Query: 1259 --DSF---EKLSL-GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
D F EK L PKALGDI ES+AGAIF+DS + + V++ ++
Sbjct: 1906 HSDGFRYHEKYYLEEEECEEAEEVEVPKALGDIFESVAGAIFLDSNMSLDTVWRVYYAMM 1965
Query: 1313 EPMITPETMRFH----PVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEH 1367
+P I E H P+REL E Q F + ++GK + VEV GR
Sbjct: 1966 KPEI--EYFSTHVPKSPIRELLELEPQTAKFERAE---MTLNGKVRIRVEVFGKGRF--- 2017
Query: 1368 TFLDADKKTAKKVACKEVLKSLR 1390
+ +K+ AK A K L++L+
Sbjct: 2018 VGVGRNKRIAKCTAAKRALRALK 2040
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 55/296 (18%)
Query: 391 IIFVERVITAIVLQSLLSELLPR----HCTWKTKYIAGNNS------------------- 427
I+FV + ITA +L LSE+ R + ++ G ++
Sbjct: 541 IVFVRQRITAYILSLWLSEVAARFPEEYGFITPNFLVGRSTPPPVAPGGRGRAGGDVVAA 600
Query: 428 -GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
+ ++Q E++++FR N++VATS++EEG++V CNLV+ FDP + +++ S+
Sbjct: 601 LALTPLGLQRQEEVLQKFRARECNLLVATSVVEEGIEVPRCNLVVRFDPPENLRAYMLSK 660
Query: 487 GRARMQNSDYLLMVKSGDS------------TTQSRLENYLASGNKMRKEVLSHASLPCS 534
G+A+ +S Y ++V +S T Q LE + +EV +
Sbjct: 661 GKAKAAHSRYFVLVPREESARFLEDLHDHRTTEQILLERSHVEDTTLDEEVDPAFADSLK 720
Query: 535 PLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK---FHINKE--- 588
P + ED V ++S++++L+ YC++LPSD + + TP +N E
Sbjct: 721 PPYKPLEAEDAPKV-------SMSTAIALVNRYCAKLPSDTFTRLTPTSSMTEVNVEGDR 773
Query: 589 ---MGICTLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
+ C+L+LP N P++ I + KQA L+ C++LH++G L DNL+P
Sbjct: 774 DTTLYRCSLHLPINSPLKRCIVGDPMPGKLLAKQAVALKTCEELHKMGELDDNLVP 829
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 26 QLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKVVLVP 82
++E L+ A QN+IVFL SGKT + +ML++ AY +R+ + LVP
Sbjct: 35 EVELLDTAKGQNSIVFL--SSGKTFMVVMLVKELAYQVRRDVESGGKRVLVLVPSAESGT 92
Query: 83 QQAEAIKMHTDLKVGKYWG-DMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL-----RL 136
+ + ++ +TDLK + D DF ++ ++H VLV+TP+ +
Sbjct: 93 RHQKMMEDYTDLKSAFFSAPDNRTDF------PKQFAEHHVLVLTPEAFAHHFVEADADI 146
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMT 166
+ ++ + +++ D+CH A + Y ++
Sbjct: 147 AETLIDAVNLVVFDDCHVALREAAYGPVLA 176
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 43/254 (16%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + LN S F + T+ +Y E+Y I++ R+PLL+ R
Sbjct: 1052 QFFYVAEICHDLNPKSDFP--DAGFETFDAYYREKYDIRVVDGRQPLLDVDHTSARLNLL 1109
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
Y+++ ++ K + S + L PELC ++ P S + +P ++
Sbjct: 1110 TPRYVNRKGVTLPTSSEQTKRAKRESLQQKQILVPELC--LVHPFPASLWRKAVCLPCVL 1167
Query: 951 HRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLE---TLGDSFL 1007
+R+ SLLLA L+ T+ + T + DF +L+ TL D
Sbjct: 1168 YRMNSLLLAEQLRL-------------TVAREVHVGTPELPGDFEWPTLDFGWTLADVLR 1214
Query: 1008 KYAASQQLFKTYQNN---HEGLLSVKKERIISNAALCKLGCEQKL-PGFIRTESFDPKMW 1063
K + + + + G+ V+ IS A + + G E+ P + ++FDP
Sbjct: 1215 KAQEAAKAEEERAADLLERTGIQPVR----ISPADVWRAGPEEPAYPQDLVIDTFDPSKV 1270
Query: 1064 IIPGDNSGSYELND 1077
IP D+ + +L D
Sbjct: 1271 EIPDDDQLADQLAD 1284
Score = 40.0 bits (92), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L ++S PS+L++ALT + +RLE +GD+ L Y +T +LY +P + G
Sbjct: 1542 LSSHSGPSPSILLQALTMSNA---NDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGK 1598
Query: 1217 LTDMRSASVNN 1227
L+ +RS ++N
Sbjct: 1599 LSHLRSRQISN 1609
>gi|238499727|ref|XP_002381098.1| Dicer-like protein [Aspergillus flavus NRRL3357]
gi|220692851|gb|EED49197.1| Dicer-like protein [Aspergillus flavus NRRL3357]
Length = 694
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 248/512 (48%), Gaps = 68/512 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY--LLRKPS---PFVAVFLVPK 77
R YQ+E E A QNTI L+TGSGKTLIA++LL+ L+ + + P ++ FLV
Sbjct: 105 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLLLKHIIQNELIDRANGKPPRISFFLVDS 164
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V L QQA ++ + D V +++G MG D W TW + + V+V T +IL L S
Sbjct: 165 VTLAFQQAAVLRNNLDQNVVQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQCLLNS 224
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y +++ I +LI DE HH + H YA I+ E Y L+ + PRIFGMTASPI +K
Sbjct: 225 YIRMDQINLLIFDEAHHTKKDHPYARIIRESY---LKADPTKRPRIFGMTASPIDTK--- 278
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFI--PFSTAKFKFYKYDEIPHALYTHLAD 255
D + LE L++SK+ T + ++L + P + ++YD++ T L
Sbjct: 279 --GDIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEES----WEYDKLDPPFATKLYQ 332
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL---SELGVWLALKAAETIS 312
L QA +S + + L SELG A +A
Sbjct: 333 IL-------------------QARF--GDISSLQPVFRFTLQASSELGPCCADRAW---- 367
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS-IGDDSKFNLDS--GLLT 369
Y +L+G + + S Q + + E S I + FN + G L+
Sbjct: 368 AYALADDVLPKLEGNVRKLAQSISSPIPQCALREISRIQEASDIVKNHSFNSPNFPGELS 427
Query: 370 EKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI------ 422
K+ L + L++Y + +CI+F ++ TA +L L S T + Y+
Sbjct: 428 PKVQLLRQKLIKYFEHPTETKCIVFTQKRYTAKMLFDLFS-------TLEIPYLRPGVLI 480
Query: 423 ---AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
+G+ G+ R++ +V +FR G +N + ATS+ EEGLD+ CNLVI FD T+
Sbjct: 481 GVRSGDIVGMNVSFRQQFLALV-KFRSGEINCLFATSVAEEGLDIPDCNLVIRFDLYNTL 539
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRL 511
++QSRGRAR +S Y M++ ++ +RL
Sbjct: 540 IQYVQSRGRARHSSSTYASMIERYNADHAARL 571
>gi|383856609|ref|XP_003703800.1| PREDICTED: endoribonuclease Dicer-like [Megachile rotundata]
Length = 1441
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 279/602 (46%), Gaps = 61/602 (10%)
Query: 6 MESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
MES+T + AR YQ++ LE AL+QNTIV+L TG+GKT IA+ L+ + +R+
Sbjct: 1 MESNTDNFI-------ARTYQVDLLEVALRQNTIVYLPTGAGKTFIAVKLIEELSADIRR 53
Query: 66 P---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
P +F+V V LV QQ+E I T L GD VDFW W +++ K++V
Sbjct: 54 PYNEGKKHTIFVVNTVPLVVQQSEYIGRLTGLLCSPLSGDCNVDFWKDQEWNQQLEKYQV 113
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
LVMT QIL+D L Y L I ++I DECH A H IM +F+ R ++ P+
Sbjct: 114 LVMTAQILVDALSHGYIYLRNINLIIFDECHRAVNDHPMRQIM-QFFER---CSNNEQPK 169
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
+ ++AS + S V S+ D I LE +KV T S L N+ P Y
Sbjct: 170 VLALSASLLNSNVKLSKVD--SMIKSLEITFQAKVATVNSFEQLQNYYPVPQQVIVEYDL 227
Query: 243 DEIP------HALYTHLADELAMIELKHTRSLENLDLNEA-QAELIRKKVSKINSTLLYC 295
+ I A+ + D L + L ++N++ +E + + + KK+ I +
Sbjct: 228 NVISDVENRVRAIISETCDILNKLLL--NTMMKNIESDEVFRPKSVTKKLMSIMVDIQNQ 285
Query: 296 LSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSI 355
S G++ A K+A QL+ + + + L+T V + +
Sbjct: 286 FSNAGIYGASKSA---------LLHLIQLECLKKNADELNTIHVLEYLITEV-TKCRKVL 335
Query: 356 GDDSKFNLD-------SGLLTEKIVCLIESLLEYRGV-EDIRCIIFVERVITAIVLQSLL 407
D+ K N + S T K+ L++ R + CIIFV++ T VL +L
Sbjct: 336 EDEMKGNTELEKIYKYSSDQTRKLFSLLKEFYNKRSEGQQFCCIIFVQQRFTVNVLYQVL 395
Query: 408 SELLPRHCTW---KTKYIAG--NNSGIQCQSR----KKQNEIVEEFRRGLVNVIVATSIL 458
L + K +++ G NN C K + F+ GL N I+AT ++
Sbjct: 396 KNLAEHDEEYKFLKPEFMVGFSNNPYKNCIESLCIAKCNKAALLRFKNGLSNCIIATDVI 455
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
+EG+D+ +C LVI F+ V ++IQS+GRAR +S Y+L+V GD R E +
Sbjct: 456 DEGIDIPTCTLVIRFNLPMDVRAYIQSKGRARFASSHYVLLVPKGDIDYLKRYEQFQMVE 515
Query: 519 NKMRKEVLSHASLPCSPLNNHM------YGEDFYHVESTGTI---ATLSSSVSLIYFYCS 569
+++ ++S ++ P N + Y + Y V I T S+++LI YC
Sbjct: 516 KYLQQLLVSENNVRTKPTENEIKNVLYKYNIEPYAVTDENGITYTVTEQSAIALINRYCV 575
Query: 570 RL 571
L
Sbjct: 576 SL 577
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 192/420 (45%), Gaps = 69/420 (16%)
Query: 979 IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
++V+ A+T+K + F LE LETLGDS+LK+ S L+ + N +EG L+V K ++I N
Sbjct: 1015 VQVMYALTSKMGLDAFDLERLETLGDSYLKFIVSLYLYTIFPNYNEGSLTVLKGKMIGNR 1074
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL------------------ 1080
L G ++ +PG ++ + F I + +L L
Sbjct: 1075 NLYYCGIKKNIPGRMKVDDFIASSNFIAPAYTVFRQLQKQLLEKKVSPNVLYEIQIPKHE 1134
Query: 1081 -FNGRKIYVTGRK------------------------KVKSKTVADVVEALIGAFLSTGG 1115
FNG TG K V KTVAD VEALIG +L G
Sbjct: 1135 QFNGSISEETGIKIQEKVLNWETAESQTGMEHYLGIQTVPDKTVADCVEALIGVYLENLG 1194
Query: 1116 ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV---NVRH-------LESLLNYSFRDP 1165
+ L I + + R +E +V N+ +E+ L Y F +
Sbjct: 1195 IKNAITLLKWFQILPNETDA--HRLLHDISENIVVDENINRFMPWASDIETKLGYRFENR 1252
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
+LL++A TH SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA V
Sbjct: 1253 ALLLQAFTHPSYTANNVTECYQRLEFLGDAILDFLITCYIYENCGNLTPGALTDLRSALV 1312
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS--LGSTFGW----------E 1273
NN +A SV++GLH +L + L I+ V E+ + W
Sbjct: 1313 NNITFACLSVRYGLHTALLAYAPNLNDVIHRFVKFQEERDHIVNDELLWILLEEDECNMA 1372
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTE 1331
PK LGD+ ES+ GAI++DSG N ++ I + I + + PVR L E
Sbjct: 1373 EHVDVPKVLGDLYESVIGAIYLDSGKNLRKTWEIIYSFMHKEIDEFSKNIPKQPVRVLYE 1432
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 847 IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLS 906
+Y +T + L NS F +N +Y +Y+E++G+ + ++P+L + I NY+
Sbjct: 775 VYIVTQICEDLTPNSCFPTDN--FFSYAHYYKEKHGLIINDLKQPMLEVKAISRKINYIK 832
Query: 907 KCRQQKQKEPSKIS-----FE--LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA 959
R Q + KI+ F+ L PELC I P + T +PSI+HR+ LL+A
Sbjct: 833 PRRMQNNSKKRKIADVYKDFKEHLVPELCIRITFPALY--WLKTTLLPSILHRVSQLLIA 890
Query: 960 VNLKNML 966
+L++ +
Sbjct: 891 EDLRSTI 897
>gi|367045744|ref|XP_003653252.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
gi|347000514|gb|AEO66916.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
Length = 1591
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 309/663 (46%), Gaps = 97/663 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-SYAYLLRKPSP----FVAVFLVPK 77
R+YQLE E A QNTI L+TGSGKTLIA +LLR + L S VA FLV K
Sbjct: 138 RDYQLELFERAKAQNTIAVLDTGSGKTLIAALLLRWTIQNELENRSKGLPKRVAFFLVDK 197
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDM-----GVDFWDGATWKEEMSKHEVLVMTPQILLD 132
V LV QQ + + D + K+ GDM +FWD T+ E M+ +V+T +IL
Sbjct: 198 VALVFQQHAVLACNLDYPIEKFCGDMVDEVSSKEFWD-KTFDENMA----IVLTAEILYQ 252
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
L SY +++ I +L+ DE HH + H YA I+ +FY + + G PRIFGMTASP+
Sbjct: 253 CLHHSYIRMDQINLLVFDEAHHTKKNHPYARIIKDFYIEVKDEGQR--PRIFGMTASPVD 310
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTH 252
+++ D +LE L++S++ T A +VL + +F +Y+ P T
Sbjct: 311 AQI-----DPVVAAAELEALLHSQIATVADTAVLQHTAAKPEHEF-LVEYERRPPDWET- 363
Query: 253 LADELAMIELKHTRSLENLDLNEAQAEL-----IRKKVSKINSTLLYCLSELGVWLALKA 307
DLN A EL I KK T +ELG W A +
Sbjct: 364 -------------------DLNRALKELVGGHRIFKKPFAFTDT---AAAELGPWCADR- 400
Query: 308 AETISCYESDFFAWE---QLDGFGE-TIIKKFGSDASQALVTYVPSGAE-WSIGDDSKF- 361
Y FF + +L+ E ++++F Q++ ++ + + + + +F
Sbjct: 401 ------YWQLFFREDNAVKLESRTERELLREFAY--HQSMDEHIGKVKQAYQLVNQHRFP 452
Query: 362 --NLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW 417
L LL+ K++ L+ L + G + RCI+FV + A +L LL + +
Sbjct: 453 RPGLSPHLLSSKVILLVRILWDQFNGGDTNRRCIVFVRQRNVATLLVDLLQQPEMKIPGL 512
Query: 418 KTKYIAGNNSGIQCQSRKK-----QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
K + G +K Q + +F++G +N I ATS+ EEGLD+ CN++I
Sbjct: 513 KPGVLVGGGRPEASWDNEKVTYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIR 572
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH--AS 530
+D + T+ +IQSRGRAR S Y+ M + G++ SR L S NK ++VL +
Sbjct: 573 YDLNDTLIQYIQSRGRARQAGSVYIHMAEKGNA-DHSR----LLSLNKQGEDVLRKFCEA 627
Query: 531 LPCS-PLNNHMYGEDF----------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
+P LN + + D+ Y V TG S++ + + + LP
Sbjct: 628 MPEDRKLNANTFDMDYFLRKEKDQRQYTVPETGAKLNYKQSMACLATFVASLPHPPEVSL 687
Query: 580 TPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDN 635
T + + G C + LP + PI++V + ++ + K +A E C L + L +
Sbjct: 688 TADYLVLPVPGGFQCEVTLPESSPIRSVTGRVHLSKVVAKCSAAFEMCLLLIKGKYLDQH 747
Query: 636 LLP 638
L P
Sbjct: 748 LRP 750
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 202/469 (43%), Gaps = 69/469 (14%)
Query: 922 ELPPELCRIIMAPISLSTF--------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQN 973
+L P+ C + + P+ +S Y+F P+I+HR+ S L+A++ ML +
Sbjct: 1026 DLEPKPCFLALEPLRISPLPVDVVAMAYNF---PAIIHRIDSNLVALDACKMLGLDIRPD 1082
Query: 974 VTIPTIKVLEAITTKKCQEDFHL--------ESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
+ + T ++ E + E LE LGD FLK A + +F + E
Sbjct: 1083 LALEAFTKDSDNTEERDAEQVNFQGGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEF 1142
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRK 1085
V++ ++ N L KL +IR+ +FD + W G L G++
Sbjct: 1143 DYHVERMLMVCNRNLFNNALNVKLEEYIRSMAFDRRSWYPEGL----------VLRKGKR 1192
Query: 1086 IYVTGRKKVKSKTVADVVEALIGAFLSTGGEN-----------VGLIFLDRIGIKVDFVN 1134
+T + + KT+ADV EALIGA T E V + D+ + +
Sbjct: 1193 KDITRQHMLADKTIADVCEALIGAAYLTAQEKDPNNFDLAVQAVTALVKDKNHTMTSYRD 1252
Query: 1135 V------PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCY 1186
P + ++ +L + + Y+F+ P LL A H +Y M +P Y
Sbjct: 1253 YYAAYVKPDWQTAPANSTQLDMAARFHARMGYAFKHPRLLRSAFQHPTYPSMYERLP-SY 1311
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA 1246
QRLEFLGDA+LD +L++++PG P +LT+ + A V+N +V+ G H+ + +
Sbjct: 1312 QRLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVELGFHRALTYC 1371
Query: 1247 SHELYKRINITVDSFEKL-----SLGSTFG----------WESVTSFPKALGDIIESLAG 1291
S L + I V E+ + G W + PK L D +E+ G
Sbjct: 1372 SPALQREIGEYVAEMEEALQSAREDAARHGRREDEYSRDYWVDCSRPPKCLPDTVEAYVG 1431
Query: 1292 AIFVDS----GCNREVVFQSIRPLLEPMITPETM-RFHPVRELTEYCQK 1335
A+FVDS G R+ + +RP E M +T HPV L Q+
Sbjct: 1432 AVFVDSEYDFGRVRDFFARHVRPFFEDMRLYDTFANKHPVTFLAGVMQQ 1480
>gi|193582606|ref|XP_001943370.1| PREDICTED: endoribonuclease Dcr-1-like [Acyrthosiphon pisum]
Length = 1626
Score = 199 bits (507), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 215/414 (51%), Gaps = 33/414 (7%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+TT + + LE LET+GDSFLKYA + L+ T+ N HEG+LS + +S
Sbjct: 1188 PSI-LLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVS 1246
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L +LG + + + F+P+ +P G ++L + ++ N I +T +
Sbjct: 1247 NLNLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKL-EKAVINS-NISIT-QHITND 1303
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYQRQFQVHAERLVN-- 1150
K++AD VEALIGA+L + G L+F+ +GI V D + Y + R VN
Sbjct: 1304 KSIADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPSPLLRNVNDP 1363
Query: 1151 ----------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
E L Y F+D S L++A+TH SY + CYQRLEFLGDAVLDYL
Sbjct: 1364 EGELTKLMDGFESFEQHLGYYFQDRSYLLQAMTHASYYPNCLTDCYQRLEFLGDAVLDYL 1423
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL----YKRINI 1256
IT +LY PG LTD+RSA VNN +A +VK+G HK++ H S L Y+ + I
Sbjct: 1424 ITRHLYEDKRRHPPGALTDLRSALVNNTIFASLAVKNGFHKYLKHLSPGLSEVVYRFVAI 1483
Query: 1257 ------TVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
T+D S F PK LGDI ES+AGAI++DS + + V++
Sbjct: 1484 QEENGHTIDEEFCFSGEDDFEDAEDVEAPKVLGDIFESVAGAIYLDSNMSLDAVWKVYHK 1543
Query: 1311 LLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
++E I + + PVREL E + N KP + V VE+ G
Sbjct: 1544 IMENEIKQFSKNVPISPVRELLEL-EPNTAKFSKPEKLVDGRRVRVIVEILGKG 1596
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 167/716 (23%), Positives = 294/716 (41%), Gaps = 132/716 (18%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELL---PRHCTW-KTKYIAGNNSGIQCQ------SRK 435
E++ II V +TA VL L +L W + +Y+ NN+ + RK
Sbjct: 420 ENVCAIILVNSKMTASVLYHLFLDLKNSNEEDFGWIEPQYMVDNNADPITEPEEFEIERK 479
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q I++ FR+ NV++ T LE G+++ CNLVI ++ + S++ S+ +AR ++
Sbjct: 480 TQENILKRFRQRNCNVLIGTKELETGINLPRCNLVINYNLPLSYKSYLMSKSKARTLDAY 539
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVES----- 550
Y+LM D S++ + + + +LSH +L + +Y + F S
Sbjct: 540 YVLMF---DEHATSKILSCCQLYKDINQMLLSHCTLKDIDMEKEIYADRFNWFVSPFKPG 596
Query: 551 ---TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNNCP 601
+++++ L+ YC++LPSD + K +P + I N+ M +C++ LP N P
Sbjct: 597 KKEDSAFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKIQSIVYENQPMFVCSIRLPINSP 656
Query: 602 IQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAE 658
I+ I + K+ A LE C++++ G L D L P I E A +E
Sbjct: 657 IKHEIHGHPMPCEILAKRIAALEVCRQIYSQGQLDDTLQP-ITKESFHALFNTDEIIPDT 715
Query: 659 HPIYFPPELVNQSPQDTKITYH-----------CYLIELKQHFNYDISARNIVLAMRTEL 707
+ + P K H C +E K Y I NI + +
Sbjct: 716 EDSLITCKTKDSMPGTYKRRQHYYKRTAEALNDCRPVEGKPCHLYAI-LLNITCPIPEQE 774
Query: 708 ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD-----HNLD 762
++ ++++ E G + KH+ I P C + L R+ D H LD
Sbjct: 775 NTKSRRIHPPEESIHGFGILTTKHIPSIPAFP-IYPRCGEVYVRLKRIKTDMFLTQHQLD 833
Query: 763 KLNEILD-------GFELRDNLEID-------YLLLPS----TGQL-IDWKTVATVLFPR 803
+ L+ F+ + +E + Y ++P+ +G + +DWK + V R
Sbjct: 834 NIATFLNYTFSNVLCFK-KCRVEFNPTTTHNCYYIVPTLRDASGSIDVDWKILDNVQTFR 892
Query: 804 DNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP-----HNGQIYCITGVLGHLN 858
DN S + N +H + ++ V TP + + + + HLN
Sbjct: 893 DN------KLSIITNEDRIHFQPD----IEVLKDAVVTPWYRNQEQPEYFYVEEICTHLN 942
Query: 859 ANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYLSKCRQQ-- 911
S F T++ Y +Y +++ +PLL+ R F Y++ C+ +
Sbjct: 943 PKSPFPDPTEKYKTFEDFYYHKYSLKIQNLEQPLLDVDPTSARLNFLTPRYMN-CKGEYL 1001
Query: 912 -------KQKEPSKISFE--LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA--- 959
K+ + +S + L PELC I + P S+ + +PSI++R+ +LLLA
Sbjct: 1002 PTSSDATKRAKRYDLSHKQILVPELCNIHLFPASM--WRDAVSLPSILYRINALLLADEI 1059
Query: 960 ---------VNLKNMLLDHCMQNVT-----------------IPTIKVLEAITTKK 989
+ L N+ DH + + I TIKV+E + T K
Sbjct: 1060 RTIVAKDTSLGLVNLSFDHIWKPLDFGWPIKDVLIRRKEQKEISTIKVIEPVETVK 1115
>gi|392566224|gb|EIW59400.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 1508
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 194/716 (27%), Positives = 312/716 (43%), Gaps = 124/716 (17%)
Query: 14 VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF 73
V A + R YQ E LE +L +N I+ L+TGSGKT IA++ ++ A + S V+ F
Sbjct: 11 VGAPPIVHTRAYQQELLEESLHRNLIIALDTGSGKTHIAVLRMKLEA---ERHSRKVSWF 67
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLD 132
+ P V LV QQ E IK + VG G + W D + W+ ++ H ++V TPQ+LLD
Sbjct: 68 IAPTVALVDQQYEVIKTAIPVSVGHVSGASEPNQWKDASLWRRILATHRIMVTTPQVLLD 127
Query: 133 GLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLE----TG--DSNLPRIFG 185
L +Y L I +++ DE HHA GKH Y+ IM FY L TG D P + G
Sbjct: 128 ALHHAYVDLGTDIGLMVFDEAHHATGKHPYSMIMKNFYMNLPSRTNLTGPTDRVRPAVLG 187
Query: 186 MTASPI-KSKVSSSEQDYWQKIHDLETLMNSKVYTCA------SESVLSNFIPFSTAKFK 238
+TASPI V + DLE ++S + + +E V
Sbjct: 188 LTASPIYGGNVDVA-------FRDLEKNLDSTIRSARKHRDNLAEHVYRPEFKHVLYASP 240
Query: 239 FYKYDEIPHALYTHLA---DEL-------------AMIELKHTRSLENLDLNEAQA---- 278
+ +D +P A Y L D L + +L+ T LD ++A
Sbjct: 241 IHVWDGLPSANYQSLQTVIDALDIENDPYVKSLRSRLAKLRPTDDRHRLDQQLSKAIDKE 300
Query: 279 -ELIRKKVSKINSTLLYCLSELGVWLA--------LKAAETISCYESDFFAWEQLDG-FG 328
K + ELG W A +A + Y + AW++ + +
Sbjct: 301 DTFTHKGLRDFARAAAEICVELGPWAADWYVAKVIERAKVAANPYNNIMSAWQEKEKRYL 360
Query: 329 ETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV--- 385
+II K VT PS + + SG ++ K+ L++SL+ G+
Sbjct: 361 LSIISKVN-------VTTPPSDVD---------KIVSG-VSPKVRALVDSLVVEEGLFRS 403
Query: 386 --EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS---------R 434
ED +IFV R T + L LL + ++ + G++S + S
Sbjct: 404 RDEDYSGLIFVTRRDTVLALAELLQRIPETAQLFRIGCLLGSSSSFKRHSFLDITRNILD 463
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+ Q + + +F+ G N+IV+TS+ EEG+D+Q+C VI FDP + ++ QSRGRAR + S
Sbjct: 464 ESQADTLRDFKIGDKNLIVSTSVAEEGIDIQACGSVIRFDPPPNIVAWAQSRGRARRKRS 523
Query: 495 DYLLM--------VKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY 546
+++M VK ++T + + Y N R++ + + + Y E +
Sbjct: 524 SFIIMFEETGPQKVKEWEATERQMMLAY----NDPRRDAIVPVDEDDAFDDMDGYVE--F 577
Query: 547 HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE---MGICTLYLPNNCPIQ 603
V STG + TL S++ + +C+ +PS G+ P + ++ G +L P+ P Q
Sbjct: 578 EVASTGALLTLHSAIPHLNHFCAVIPSGGHESHVPIYELDPPDYVEGWHSLPNPSRMPYQ 637
Query: 604 ---------------------TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
T G+ + +Q +A +L+ G L ++LLP
Sbjct: 638 GPWGATVSLPRALPKHLRKFSTPQIHGSKRRAQQHVAYQAYLELYHAGLLDNHLLP 693
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 233/503 (46%), Gaps = 63/503 (12%)
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
L RR F + L ++ Q P F L P+ + +A S +PSI+
Sbjct: 930 LPRRRNFLIPLTLENADRRIQPPPDDSLFLLHPQYALVELA--SRDEVQYALMLPSILRW 987
Query: 953 LQSLLLAVNLK-NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
L + L L+ N+ + V +P + L AIT QE H + LETLGD+ LK+ +
Sbjct: 988 LANALTVDALRTNLFRTTSVAGVPLPLL--LTAITAPIAQELSHYQRLETLGDTVLKFTS 1045
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S QL+ + HEG LS KK+ ++N++L K ++ L +I + F P+ W +S
Sbjct: 1046 SNQLYAEFPLWHEGYLSRKKDHAVANSSLAKEAVKKGLYQWIIRDRFVPRKWKPHCASST 1105
Query: 1072 SYELNDDSLFNGRKIYVTGR------------KKVKSKTVADVVEALIGAFLSTGGENVG 1119
L++ V + +++ +K +ADVVE+LIGA GG ++
Sbjct: 1106 QGPLDELVEEKEEVKEVDAKVGKDGKPKKKKAEELSTKMLADVVESLIGAAYEHGGFDLA 1165
Query: 1120 LIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRH----LESLLNYSFRDPSLLVEALTHG 1175
+ + R G+ + + + + + E LV++ +E +LNY F+ + LV+ALTH
Sbjct: 1166 IDCVARFGLGISWKKLSERIKEMHEVEDLVDLPDQLALVEQMLNYQFKRRTFLVQALTHA 1225
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPGLSPGYLTDMRSASVNNDCYAL-- 1232
SY +RLEFLGD+ LD ++T YLY+ + SPGY+ + A+VN+ A
Sbjct: 1226 SYQGDSAVMSLERLEFLGDSALDMVVTDYLYHAEGKNYSPGYMHIKKEAAVNSHILAYVC 1285
Query: 1233 ------------------------SSVKHGLHKHILHASHELYKRINITVDSFEK----- 1263
S K L + +LH+SH + + N+T FEK
Sbjct: 1286 LSTSVTVESVMPTWTLGGGLATTDDSQKVHLWQCLLHSSHRVLEDQNLTFARFEKHGPAI 1345
Query: 1264 ---LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCNREVVFQSIRPL-----LE 1313
L + W ++TS PK + D++ES+ GA++VDS + + V +R L +E
Sbjct: 1346 AQALREDRIYPWAALTSLQAPKFISDMVESILGAVYVDSMGSLDAVRGVMRSLGLMQVIE 1405
Query: 1314 PMITPETMRFHPVRELTEYCQKN 1336
++ + HPV L + K
Sbjct: 1406 RVVIEDVDVLHPVSRLAIWAAKQ 1428
>gi|226294068|gb|EEH49488.1| Dicer [Paracoccidioides brasiliensis Pb18]
Length = 1423
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 249/987 (25%), Positives = 421/987 (42%), Gaps = 139/987 (14%)
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSGIQCQSRKKQNEIVEE 443
D +C++FVE+ +A +L L S + RH +T + G + +G + S ++Q + +
Sbjct: 381 DTKCVVFVEKRHSARLLGELFSLIGTRHM--RTGVLIGVRTDEAGGEKVSFRQQFWTLLK 438
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR+G +N +V I + V N + + A M D L+ +
Sbjct: 439 FRKGELNCLVCFMIAPPKIFVPLFNYDMQY---------------AHMMERDNLIHQRCL 483
Query: 504 DSTTQSRLENYLASGNKMRKE--VLSHASLPCSPLNNHMYGE---DFYHVESTGTIATLS 558
D ++ EN + + E ++ AS L+ +Y E + V STG+ T +
Sbjct: 484 DEAQEA--ENIMRQFCESLPEDRIIRGAS---DELDKFLYKERCRKTFTVPSTGSKLTYN 538
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL-- 614
S+++++ Y S L + + I++ G +C + LP P++ + + + L
Sbjct: 539 SALAVLAHYASSLQYENEMSTRANYFIHRIRGAFVCEVVLPEKSPVRGLTGRPAVAKLSA 598
Query: 615 KQAACLEACKKLHQIGALTDNLL-------PDIVVEKHDAQKRGNEPYNAEHPIYFPPEL 667
KQ+A E C L + G L D L P + K + + Y+ + P+L
Sbjct: 599 KQSAAFETCLMLRKNGLLDDYFLSKYHKRLPLMRNAKLAIKSKKTNQYD----MMVKPKL 654
Query: 668 VNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELES-EIKKVNFDLEVERGRLT 726
+S T H ++ L+ + +VL R L + + + ++E ++
Sbjct: 655 WEKSRGMTPYEVHATVLTLRPSAKLRRVHQPLVLLTRESLPKFPVFPLYLETDIECDVVS 714
Query: 727 VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPS 786
+ L+ +Q+ +++ L F + +F+ + D ++ + +LE +L S
Sbjct: 715 IPLR--ASMQVSQSELDLFTTFTLRIFQDLFHKVYDHQPAMMPYWLAPISLEYGNVLEDS 772
Query: 787 T-GQLIDWKTVATVL----------FPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIH 835
QLIDWK + V PR S N+ ++ R + S I
Sbjct: 773 NLRQLIDWKIIQHVQENPEICWTSDMPR--SSLENIFMFDKWDDRYRYFTSE--LELNIR 828
Query: 836 NSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNG 895
S P + + ++ N ++ YKK + G C +P++
Sbjct: 829 PSDPPPPTMAKRRYMDSIM------------NYCISLYKKSRLKFLGT--CDWNQPVVRA 874
Query: 896 RRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
+ +N L + + K +E S+ + PE RI P ++ F +FTF P+++ R++S
Sbjct: 875 ELVRLRRNLLDRTTEHKGEE---TSYYICPEPLRISALPAPVAVF-AFTF-PAMISRIES 929
Query: 956 LLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH--------------LESLET 1001
L+A+ N L Q IP + LEA+T + H E LE
Sbjct: 930 YLIALEACNKL-----QLTIIPEL-ALEALTKDSDNTEEHRAEQIHFQRGMGKNYERLEF 983
Query: 1002 LGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPK 1061
LGD FLK + S LF ++ E VK+ +I N L + F+RT+ F +
Sbjct: 984 LGDCFLKMSTSISLFAMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRTQGFSRR 1043
Query: 1062 MWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK--VKSKTVADVVEALIGAFLSTGGENVG 1119
W G L G+ T K + K++AD+ EALIGA L +GG
Sbjct: 1044 NWYPEGIK----------LLQGKAKSETAENKHSLADKSIADICEALIGASLLSGGRVHR 1093
Query: 1120 LIFLDRIGIKVDFVN-----------------VPYQRQFQVHAERLVNVRHLESLLNYSF 1162
F + FVN +P + + +L + + L Y F
Sbjct: 1094 --FDTAVKAVTAFVNSENHQVSDWQSYVGLYSLPRYQIAEADDTQLDLAQQIGDRLGYRF 1151
Query: 1163 RDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
+ P LL A TH SY ++P CYQRLEFLGD++LD + +LY+KYP P +LT+
Sbjct: 1152 KYPRLLSSAFTHASYPTGWSKVP-CYQRLEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEH 1210
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRIN---ITVDSFEKLSLGSTFGWESVTS 1277
+ A V+N +VK GLH+H+L+ S L +I +++ E S+ S W + +
Sbjct: 1211 KMAMVSNKFLGAVAVKLGLHRHLLYFSKALLGQITRYAEEIEATETESIDSPDFWTTTSD 1270
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVV 1304
PK L D++E+ GAIFVDS + EVV
Sbjct: 1271 PPKCLPDMLEAYIGAIFVDSNFSFEVV 1297
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 103 MGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYA 162
+ D W TWK SK+ ++V T ++L L S+ ++ I +LI DE HH + H YA
Sbjct: 122 LQTDLWSKETWKRHFSKNMIIVCTAEVLYQCLLHSFIQMEQINLLIFDEAHHTKKDHPYA 181
Query: 163 CIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS 222
I+ +FY ++ E+ + P+IFGMTASP+ +KV D + LE L++S++ T ++
Sbjct: 182 RIVKDFYLQMTES--QHRPKIFGMTASPVDAKV-----DVVTAVKSLEMLLDSQIATASN 234
Query: 223 ESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
L + T + + YD + A T L
Sbjct: 235 LDALRQSVARPTE--QEWVYDRLDPAFETDL 263
>gi|391332351|ref|XP_003740599.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1610
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 191/662 (28%), Positives = 298/662 (45%), Gaps = 93/662 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR------SYAYLLRKPSP-----FV 70
AR+YQ+E ++A ++NTIV L TG+GKT I+++LL+ S ++ +P+
Sbjct: 23 ARSYQIELFKSAKERNTIVCLGTGTGKTYISVLLLKHLEHEVSGCWVDGEPATPGSGGKR 82
Query: 71 AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL 130
++FL P V LV QQ + H +KVG Y G M VD W W E+ H VLVMTP IL
Sbjct: 83 SIFLAPTVPLVEQQGAVLGRHLSVKVGIYVGAMQVDLWSRERWVNELKAHGVLVMTPAIL 142
Query: 131 LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP 190
+ + LN I ++++DECH A G Y IM ++ L+ D PR+ G+T S
Sbjct: 143 YNAACHGFIPLNKISLIVMDECHRATGDDNYVSIMK--LYKDLQPQDR--PRVLGLTGSV 198
Query: 191 IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALY 250
I S + + ++I +LE + S T +S S L + + PH
Sbjct: 199 INSALRGVQ--VTRRIRELEATLFS---TASSASGLVSMYCTKPKEMIVSCPSRNPHNRL 253
Query: 251 THLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET 310
I+ LE+ D +L K KI S L C E G + L+ E
Sbjct: 254 P--------IDASSMEDLEDCD------DL--KDFQKILSGLSSCYEECGAFCTLRLIE- 296
Query: 311 ISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE 370
F E G+ S + L Y+ + + KF S L +
Sbjct: 297 -------FRQRELSRNVGD-------SQYPEELREYLMPKMKI-LERMKKFLGKSPPLLD 341
Query: 371 ---KIVCLIESLLEYRGVEDIRC-IIFVERVITAIVLQSLLSELLPRHCTW---KTKYIA 423
K+ L+E L +R C I+FV+ + A VL L E L + W + +I
Sbjct: 342 VPPKMHRLLEVLAAFRTNPAGLCGIVFVKLRVIAYVLYQWLGE-LSKTDDWRFLRCAFIV 400
Query: 424 GNNSGIQCQSR----------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
G+N S K Q + FR G+ N+++AT+++EEG+DV +CNLV+ F
Sbjct: 401 GHNQAPMSTSNREFENFKMNSKAQRRTIAAFRDGVYNLLLATNVIEEGMDVPACNLVVRF 460
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS------ 527
D R S+ QS+GRAR + S Y+++ D + +E+ + S + + V +
Sbjct: 461 DAPRDARSYTQSKGRARARQSLYVVLC---DENERLEVEDMIDSFQETERIVTTFCDQTR 517
Query: 528 ---HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH 584
A + L + + E F E+ + S++S++ +YC + D Y P+F
Sbjct: 518 RSPDAEESETVLRDDEFLEPFIAGEAR---ISAKSAMSILCWYCQTIVHDQYSNSLPEFF 574
Query: 585 I---NKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAA-----CLEACKKLHQIGALTDNL 636
N E +L +P CP++ I + +A LE C+KLH+ LT++L
Sbjct: 575 TLDKNDEGFTMSLTMPLLCPVRESITNEDRPMPTRAKAKAYLALEMCRKLHEKRELTEHL 634
Query: 637 LP 638
LP
Sbjct: 635 LP 636
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 24/259 (9%)
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFV-----NVPYQRQFQ 1142
+++ AD V+A+ G + G + L + +G++ DFV N+ R
Sbjct: 1242 RARVAADAVKAITGLAVDKCGPSGALRVMRWLGLEFGRSIDSPDFVDAFALNLDSLRVSD 1301
Query: 1143 VHA---ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
A RL + +ES L Y F +L++EA+TH SY + + +L +G V++Y
Sbjct: 1302 SDAVILNRLHQIETVESRLRYRFEHKALVLEAITHHSYRGDSLTQSNVQLCSIGAVVIEY 1361
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV- 1258
LI+ ++ + + L ++R++ + +A K+GLHK++L+ + L+ I +
Sbjct: 1362 LISKFIASLPLDVESYNLFELRASICSAVNHAHIVAKNGLHKNLLYTNQSLFTVIRNYID 1421
Query: 1259 --DSFEKLSLGSTFGWESVTS----FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
D +E S WES + P AL +++ +L GA+F+DSG N E+V+ L
Sbjct: 1422 CLDDYEPQPSKSLGDWESDDTDDDRVPLALAEMLMALVGAVFIDSGKNLEIVWSVYAELC 1481
Query: 1313 EPMI--TPETMRFHPVREL 1329
I + P+REL
Sbjct: 1482 GEQILRLANNIPISPIREL 1500
>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
Length = 1524
Score = 197 bits (502), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 184/665 (27%), Positives = 297/665 (44%), Gaps = 66/665 (9%)
Query: 7 ESDTTEEV---------SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR 57
E+DT E+ SA + R YQL+ E A +QNTI+ L+TGSGKT IA++LLR
Sbjct: 98 ENDTVEDSATIVESGTPSAKIVTTPRQYQLDLFERAKQQNTIIVLDTGSGKTYIAVLLLR 157
Query: 58 SYAYL---LRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWK 114
L ++ + A FLV KV L QQ ++ + + VGK++GD W
Sbjct: 158 HVLALELEKQQQTKRTAFFLVDKVALCLQQHRFLQANLEYPVGKFYGDKA----SMREWA 213
Query: 115 EEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLE 174
E+ ++ V+V T QILLD L K+N + +L+ DE HH + H YA IM + Y R+
Sbjct: 214 SEIQENMVIVCTAQILLDLLSSGLVKMNQVNLLVFDEAHHTKKNHPYASIMRDHYIRM-- 271
Query: 175 TGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
++ PRI GMTASP+ SK +D++ DLE + SK+ T + E +L+
Sbjct: 272 --KADRPRILGMTASPVDSKT----RDFYAAALDLEATLCSKIATVSEEVLLAGM----G 321
Query: 235 AKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY 294
K + + E + ADE+ MI L + S + + L + Y
Sbjct: 322 RKQQIERVVE--YGPLVDPADEMTMISLSLSLSTLCAPQSNFRIHLEAAR---------Y 370
Query: 295 CLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDA-----SQALVTYVPS 349
S +G W A + + + +L + GS A Q+ + +
Sbjct: 371 AASIIGPWGAHQYWRQLFKSRDQYLTITELAANTADELNSHGSGACCQVQEQSDDDLIKA 430
Query: 350 GAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLS 408
A+ + D + + + K+ L E L + + + RCI+FV++ A +L +
Sbjct: 431 RAKKLVTDHVR-KESTEDFSLKVHALHEVLHDVFECQQGTRCIVFVQKRYIAFLLSEAFN 489
Query: 409 ELLPRHCTWKTKYIAGN---NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
+ R ++ G+ +S I S K Q E ++ FR G N I AT + EEG+D+
Sbjct: 490 LSVLRVPDMAAGFVVGSQPASSSIVNMSIKDQTEALDRFRYGETNCIFATQVAEEGIDIP 549
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK-- 523
C+L+I FD + +IQS+GRAR +S Y+ MV+ + + RL + +R+
Sbjct: 550 ECDLIIRFDLYDSAIQYIQSKGRARQVHSVYINMVERDNIHHRRRLMQAARDVHALRRFC 609
Query: 524 ------EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
+ A + L + + + V TG T SS ++ + S +
Sbjct: 610 SSLPSDRKIDEAEIDDGLLKLRVKSQISFEVPQTGARLTFDSSRGVLAKFVSSVCGGADA 669
Query: 578 KP----TPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGA 631
P TP N + LP++CPI++ L + +A +AC +L
Sbjct: 670 HPEYIVTP---TNTGKFTAIVLLPDSCPIKSSSGTPQRSKLLARGSAAFKACIELLNYKY 726
Query: 632 LTDNL 636
+ NL
Sbjct: 727 IDGNL 731
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 211/445 (47%), Gaps = 53/445 (11%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLE 983
P C II+ P+++ST V ++ L + ++ + +D C + ++ I LE
Sbjct: 1013 PRGCFIILEPLAISTLPVDVVVTALA--LPVTIYSIESAAIAMDACGLIDLAIYPPLALE 1070
Query: 984 AITTKKCQEDFHLES------LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISN 1037
A+T K +ED ++S LE LGD+FLK A + LF N +E V++ +I N
Sbjct: 1071 ALT--KSEEDVDVQSNKNYERLEFLGDAFLKMATTISLFTLIPNKNEFEYHVERMILICN 1128
Query: 1038 AALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRK---IYVTGRKKV 1094
L ++ L ++R+ FD + W D L G+K + +T R +
Sbjct: 1129 KNLFNHAVDRGLQEYVRSRGFDRRSW-----------YPDLVLRKGKKHKPVALTHR--L 1175
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFL----------DRIGIKVDFVNVPYQRQFQVH 1144
K++ADV EALIGA T E + L R+ D+ Q+ +Q
Sbjct: 1176 ADKSIADVCEALIGAAYMTEPEGMNLAVKAVTKMVQSRNHRMTKYSDYYEGYVQQAWQTI 1235
Query: 1145 AERLVNV---RHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYL 1200
R + V +E + Y FR P LL A H SY PE+P YQRLEFLGDA+LD
Sbjct: 1236 PPRPIEVLAADKVEGSIGYKFRSPKLLRSAFKHPSYPYEPELPN-YQRLEFLGDALLDVA 1294
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
I +L+ +YP P +LT+ + A +N ++ V+ GLH+HIL + I V+
Sbjct: 1295 IVDFLFRRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSMMGHIAGFVEQ 1354
Query: 1261 FEKLSLGSTFG------WESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRP 1310
EK L + G W + PKAL DI+E++ GA++ DS + R+ + I P
Sbjct: 1355 IEKAKLQTEDGVLQLDFWLNTEHPPKALSDILEAVVGAMYEDSKYDYNSVRDFFTKFIAP 1414
Query: 1311 LLEPMITPETMRF-HPVRELTEYCQ 1334
+ M +T HPV +LT+ Q
Sbjct: 1415 HFQDMTLYDTYAAGHPVTQLTKLMQ 1439
>gi|315051166|ref|XP_003174957.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
gi|311340272|gb|EFQ99474.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
Length = 1425
Score = 197 bits (502), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 203/730 (27%), Positives = 334/730 (45%), Gaps = 87/730 (11%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
E ++ +A + +R YQ+E L+ +LKQN IV ++TGSGKT IAI+ +R L R
Sbjct: 31 EESPKDQEAAPAMVKSRTYQIEMLKESLKQNIIVAMDTGSGKTQIAILRIRHE--LERCS 88
Query: 67 SPFVAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLV 124
+ + FL PKV L QQ AI + G ++ W W + ++V
Sbjct: 89 NDKLVWFLAPKVPLAEQQYRAISSQLPAFQTKILTGADNLERWSTQKIWDAFLLNTRIVV 148
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH----RLLETGDSNL 180
TPQ+LLD L + L I +LI DE HH IM FYH +L ET D L
Sbjct: 149 STPQVLLDALSNGFITLQRIALLIFDEAHHCVKSSPENRIMQNFYHARKDQLSETND--L 206
Query: 181 PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
P I G+TASP S + ++ + Q +H K T E ++ F+ + Y
Sbjct: 207 PYILGLTASPTSSLIENALRQLEQNLHAC-----CKTPTIHREDMM-QFVHIPELRKVSY 260
Query: 241 KYDEI-PHALYTHLADELAMIELKHT------------RSLENLDLNEAQAELIRKKVSK 287
+ D I P + L I+ K+ +SLE L A+ ++ +
Sbjct: 261 QNDSIIPLNMELKFLSMLNDIDTKYDPFFQRYQGKTDRKSLERFSLVAARKTPCFVQLKR 320
Query: 288 INSTLLYCLSELGVWLALKAAETISCYESDFF--AWEQLDGFGETIIKKFGSDASQALVT 345
+ + ELG W + S Y S+ + A E+ + ++ D + +
Sbjct: 321 CCRRISHMFGELGQWAS-------STYISEVYRRAREKETKLLDQNWSEWDRDDTSFICN 373
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQ 404
+ E I + +N +++EK+ L+ L E G R IIFVE+ TA++L
Sbjct: 374 ALKPVVE--IMGERCWNAPPDVISEKVEHLVHILSSELTGAS--RGIIFVEQRATAVMLT 429
Query: 405 SLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ-------NEIVEEFRRGLVNVIVATSI 457
L+S PR + Y GN++ +S + + +++ R G N+++ATS+
Sbjct: 430 HLISHH-PRLTHVNSDYFLGNSAFAARKSDITELSKAGDMKDSIDDLRSGKKNLLIATSV 488
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLAS 517
LEEG+DV +C+LV+ FDP + + SF+Q RGRAR +S +++ D+TT+ +++ A
Sbjct: 489 LEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKASSKFVIFYAEDDTTTK---KDWEAM 545
Query: 518 GNKMRKEVLSHASLPCSPLNNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSD 574
+ M+++ S+ + S L E + +ESTG + TL ++ S + +CS LP +
Sbjct: 546 EDIMKEKYSSNKAFIDSLLEQEDEEEVEYESFRIESTGALLTLENAPSHLSHFCSTLPCE 605
Query: 575 GYFKPTPKFHINKEMGICTLYLPNNCPIQTVI-----------AQGNIKTLKQAACLEAC 623
+ P F I+K +GI L L + TV+ A K K+ A +A
Sbjct: 606 -FTDTQPDFIISK-VGIKDL-LTAKVLLPTVLDHQFRDFEGIEAWKKEKMAKRDAAFQAY 662
Query: 624 KKLHQIGALTDNLLPD---------IVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQD 674
+L++ G + D+L+P+ VEKH + +E ++ P ++V Q
Sbjct: 663 LQLYKAGLVNDHLMPEHCRATDEETAHVEKHSSMTTCSE-------VFTPWKMVADRWQT 715
Query: 675 TKITYHCYLI 684
T Y ++
Sbjct: 716 TDTFYQSSVV 725
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 207/424 (48%), Gaps = 69/424 (16%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-V 981
+P I M P+ + F F+PS++H + LLA +L N +L ++ IK V
Sbjct: 920 IPARQSSISMLPMGFTKFA--LFIPSLIHSIGRFLLAEDLSNTIL----SSIGFKDIKLV 973
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT +E+ + + LE LGDS LK AS QL + HEG+LS KK+ I+SN+ L
Sbjct: 974 LTAITATSARENTNYQRLEFLGDSALKLHASMQLLADHPIWHEGILSKKKDSIVSNSRLW 1033
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
K + L FI T F W P NS +Y N + R+ +++ +KT+AD
Sbjct: 1034 KAAVDTGLDRFILTTCFTGAKWR-PLYNS-TYRHN---VGTARR---EQTRELSTKTLAD 1085
Query: 1102 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYQRQFQVHAERLVN 1150
VVE+LIGA + GGEN L +FL I +++ + + P F R +
Sbjct: 1086 VVESLIGAAIVDGGENKVLRCLELFLPEINWLPSGERVEILYDSAP---DFSDDFPRDI- 1141
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L++YSF +LL +L+H S ++ + YQRLEFLGD++LD ++T L+
Sbjct: 1142 LSKIEPLIDYSFTKRALLAASLSHPSNLISGM--TYQRLEFLGDSILDNVVTRALFRCDK 1199
Query: 1211 GLSPGYLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHIL 1244
+ + +R+A VN D A S+ + L +++
Sbjct: 1200 EIPHQDMHLIRTALVNADFLAFLCMKTSTDERREDVCASPTGNVKVTSSTRRVSLWQYMA 1259
Query: 1245 H-ASHELYKRINITVDSFEKLS--------LGSTFGWESVTSF--PKALGDIIESLAGAI 1293
H AS ++ + +FEKL G+ + W +++ PK DI+ES+ GAI
Sbjct: 1260 HSASLDILETQQAMACTFEKLRDEIDDALRSGTRYPWTLLSTLNAPKFFSDIVESILGAI 1319
Query: 1294 FVDS 1297
F+DS
Sbjct: 1320 FIDS 1323
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L + F+D L++ A+T S YQRLEFLGD+ L ++ L +P G
Sbjct: 962 LSSIGFKDIKLVLTAITATS---ARENTNYQRLEFLGDSALKLHASMQLLADHPIWHEGI 1018
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVT 1276
L+ + + V+N ++V GL + IL K + +S + ++G+ ++
Sbjct: 1019 LSKKKDSIVSNSRLWKAAVDTGLDRFILTTCFTGAKWRPL-YNSTYRHNVGTARREQTRE 1077
Query: 1277 SFPKALGDIIESLAGAIFVDSGCNR 1301
K L D++ESL GA VD G N+
Sbjct: 1078 LSTKTLADVVESLIGAAIVDGGENK 1102
>gi|167046036|gb|ABZ10549.1| dicer 1 [Nematostella vectensis]
Length = 412
Score = 197 bits (501), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 189/384 (49%), Gaps = 68/384 (17%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+TTK + F LE LE LGD+FLK A S L+ Y++ EG L+ +K +SN AL
Sbjct: 20 LLQALTTKSAGDAFDLERLEMLGDAFLKQAVSIFLYCCYKDGDEGKLTKRKTSQLSNRAL 79
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPG------DNSGSYELNDDSLFNGR---------- 1084
++ C LP +++ D W P + GS + + N R
Sbjct: 80 YRVACRLGLPEYLQNTQLDRVSWTTPSLQAAEVEPVGSPGKSQKTASNKRCQSASRQPEN 139
Query: 1085 -------KIYVTGRKK-----VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-- 1130
+ T R K + K+VAD VEALIGA+L+T G L FLD +G+KV
Sbjct: 140 RPEMSTLEKPETARDKALHQSIPDKSVADSVEALIGAYLTTCGYQGALHFLDWLGVKVLP 199
Query: 1131 ---------------DFVNVP----YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEA 1171
P Y QV V ++ E+ + Y F + L++A
Sbjct: 200 ESPMSTDGPRASSKYSIFTRPTITEYNSNPQVLKRFAVQLQGFENRIGYEFSNKLYLIQA 259
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
LTH SY + CYQRLEFLGDA+LD+L+T +Y++ L PG LTD+R A VNN+ +A
Sbjct: 260 LTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLDPGELTDLRQALVNNNIFA 319
Query: 1232 LSSVKHGLHKHILHASHELYKRINITV---------------DSFEKLSLGSTFGWESVT 1276
+VKHG +K + S E + +I + V D F LS G E+
Sbjct: 320 EIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQISKDPFLTLSNDDEEGIEA-- 377
Query: 1277 SFPKALGDIIESLAGAIFVDSGCN 1300
PK LGDI ES+AGAIF+DSG +
Sbjct: 378 --PKVLGDIFESVAGAIFLDSGMD 399
>gi|189234048|ref|XP_968993.2| PREDICTED: Dicer-1 [Tribolium castaneum]
Length = 1865
Score = 197 bits (500), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 226/474 (47%), Gaps = 68/474 (14%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ Y+N HEG LS + + +SN L
Sbjct: 1385 LLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSNLNL 1444
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP------------------------GDNSGSYEL 1075
+LG + L ++ FDP W+ P D + + ++
Sbjct: 1445 YRLGRRKGLGEYMIATKFDPHDNWLPPCFYVPKELEEALIDAQFPANCWTVADMAATRDM 1504
Query: 1076 NDD-------------SLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 1122
D SL N + + + K++AD VEALIGA+L G L+F
Sbjct: 1505 TLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLF 1564
Query: 1123 LDRIGIKV------------DFVNVPYQRQFQVHAERLV----NVRHLESLLNYSFRDPS 1166
+ +GI+V + P E L E + Y FRD S
Sbjct: 1565 MAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLLDGYDQFERHIGYKFRDRS 1624
Query: 1167 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN 1226
L++ALTH S+ + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VN
Sbjct: 1625 YLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVN 1684
Query: 1227 NDCYALSSVKHGLHKHILHASHEL----YKRINITVDS----FEKLSLGSTFGWESVTSF 1278
N +A +V++G H++ + S L K + + DS ++L L
Sbjct: 1685 NTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHTLVDELYLVVETEEVEDVEV 1744
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEYCQKN 1336
PKALGD+ ES+AGAIF+DSG + + V++ +++ I + + P+REL E +
Sbjct: 1745 PKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPIRELLE-LEPE 1803
Query: 1337 HFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
KP + VTVEV G +F+ + + + AK A K LK+L+
Sbjct: 1804 TAKFGKPEKLADGRRVRVTVEVFGKG-VFKG--IGRNYRIAKCTAAKCALKNLK 1854
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 253/605 (41%), Gaps = 111/605 (18%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
K+Q E++ ++R N+++ATS LE+G D+ CNLVI FD ++ S+I S+ RAR +
Sbjct: 459 KRQEEVLRKYRSHECNIMIATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKARARANEA 518
Query: 495 DYLLMVKSGDSTT-------QSRLEN------YLASGNKMRKEVLSHASLPCSPLNNHMY 541
+LL+ + + + +EN Y +K + V +SL C P
Sbjct: 519 HFLLLANENEVSDFVENLAEYNEVENTLLKRCYSLEPDKNEELVADASSLQCRPYQP--- 575
Query: 542 GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-EMG-ICTLYLPNN 599
E +LS++++L+ YC++LPSD + + TP +H K E G IC++ LP N
Sbjct: 576 -----SAEPGANSVSLSNAIALVNRYCAKLPSDTFTRLTPIWHEEKVENGYICSIRLPIN 630
Query: 600 CPI-QTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLLP--------------DIVV 642
P+ +TV + I TL ++AA C+ LH+ G L DNL P +
Sbjct: 631 SPVKKTVTSPPMINTLLARRAAAFMICQLLHKAGELDDNLQPIGKENFKVNEEDWNSSAL 690
Query: 643 EKHDAQKRGNEPYNAEHPIYF----PPELVNQSPQDTKITYH--------CYLIELKQHF 690
E+ D + P + Y+ L++ P + TY C L E +
Sbjct: 691 EESDEENLDPRPGTTKRRQYYYKKVADALLDCHPIIGQPTYFYKIVMKLTCPLPEEQNTR 750
Query: 691 NYDI-SARNIVLAMRTELESEIKKVN-FDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRF 748
I + EI K++ F + G ++V+L+ ++ + NQ+ R F
Sbjct: 751 GRKIYPPEDSPQGFGILTSKEIPKISAFPIFTRSGEVSVDLQLCSQLIVTENQICKIREF 810
Query: 749 QITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPS---TGQLIDWK---------TV 796
F ++ +L + L F D YL++P+ +DW TV
Sbjct: 811 LNYTFTSVL-----RLQKYLTLFN-PDASANSYLIVPTIDGATTTVDWDFIDLIYANLTV 864
Query: 797 ATVLFPRDNGSKHNMNCSTMFNARIV---HTKSGPLCTCKIHNSLVCTPHNGQIYCITGV 853
+ P + + + +A ++ + P Q + + +
Sbjct: 865 LPEIIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQP-----------------QYFYVAEI 907
Query: 854 LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYL--- 905
+LN S F T++++Y +Y IQ+ + LL+ R F Y+
Sbjct: 908 CSNLNPASDFP--GSDYATFEEYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTPRYVNRK 965
Query: 906 -------SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
S+ ++ ++E + L PELC I P S S + +P I++R+ +LLL
Sbjct: 966 GVALPTSSEATKRAKREKLEQKQILVPELCAI--HPFSASLWRKAVCLPCILYRINALLL 1023
Query: 959 AVNLK 963
A ++
Sbjct: 1024 ADQIR 1028
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLV--PKVVL 80
R YQ+E L++A K+NTIV S K I I LL+ +++ +R P A+F++ P
Sbjct: 17 REYQVELLDSAKKRNTIVCSSASSAKAFITIKLLQEFSHKMRVPHGKQALFVLDGPN--- 73
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
VP +K+ TDL V D + V+V T ++ + + ++
Sbjct: 74 VPIMTSHVKLLTDLTVTSI---------DKEENPPSLKASNVIVTTAEVCVLLCKKNFVH 124
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
L+ ++++D C + + IM + + + PRI G+TA + S++
Sbjct: 125 LDSYALIVID-CLYGGQQSLVREIMARY-----QAIQAPRPRILGLTAGLLGSEMQPDRL 178
Query: 201 DYWQKIHDLETLMNSKVYTCA 221
+ ++ LE L++S V T +
Sbjct: 179 E--AELQRLEKLLSSSVDTSS 197
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 50/227 (22%)
Query: 1127 GIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 1186
+++D + ++ + +L+ + P++L++ALT +
Sbjct: 1344 ALQIDLAPQDARNEYDISETMTFKFDEQPNLVEHPGPSPNVLLQALTMSN---ANDGINL 1400
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN-DCYALSSVKHGLHKHIL- 1244
+RLE +GD+ L Y IT YLY+KY + G L+ +RS V+N + Y L K GL ++++
Sbjct: 1401 ERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSNLNLYRLGRRK-GLGEYMIA 1459
Query: 1245 --------------HASHELYKRI-------------------NITVDSF--------EK 1263
+ EL + + ++T+D E
Sbjct: 1460 TKFDPHDNWLPPCFYVPKELEEALIDAQFPANCWTVADMAATRDMTLDDICSMVRQRGES 1519
Query: 1264 LSLGSTFGWESVT--SFP-KALGDIIESLAGAIFVDSGCNREVVFQS 1307
LSL + + VT S P K++ D +E+L GA ++ G ++F +
Sbjct: 1520 LSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMA 1566
>gi|270015102|gb|EFA11550.1| dicer-1 [Tribolium castaneum]
Length = 1835
Score = 197 bits (500), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 226/474 (47%), Gaps = 68/474 (14%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ Y+N HEG LS + + +SN L
Sbjct: 1355 LLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSNLNL 1414
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP------------------------GDNSGSYEL 1075
+LG + L ++ FDP W+ P D + + ++
Sbjct: 1415 YRLGRRKGLGEYMIATKFDPHDNWLPPCFYVPKELEEALIDAQFPANCWTVADMAATRDM 1474
Query: 1076 NDD-------------SLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 1122
D SL N + + + K++AD VEALIGA+L G L+F
Sbjct: 1475 TLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLF 1534
Query: 1123 LDRIGIKV------------DFVNVPYQRQFQVHAERLV----NVRHLESLLNYSFRDPS 1166
+ +GI+V + P E L E + Y FRD S
Sbjct: 1535 MAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLLDGYDQFERHIGYKFRDRS 1594
Query: 1167 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN 1226
L++ALTH S+ + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VN
Sbjct: 1595 YLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVN 1654
Query: 1227 NDCYALSSVKHGLHKHILHASHEL----YKRINITVDS----FEKLSLGSTFGWESVTSF 1278
N +A +V++G H++ + S L K + + DS ++L L
Sbjct: 1655 NTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHTLVDELYLVVETEEVEDVEV 1714
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEYCQKN 1336
PKALGD+ ES+AGAIF+DSG + + V++ +++ I + + P+REL E +
Sbjct: 1715 PKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPIRELLE-LEPE 1773
Query: 1337 HFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
KP + VTVEV G +F+ + + + AK A K LK+L+
Sbjct: 1774 TAKFGKPEKLADGRRVRVTVEVFGKG-VFKG--IGRNYRIAKCTAAKCALKNLK 1824
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 253/605 (41%), Gaps = 111/605 (18%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
K+Q E++ ++R N+++ATS LE+G D+ CNLVI FD ++ S+I S+ RAR +
Sbjct: 459 KRQEEVLRKYRSHECNIMIATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKARARANEA 518
Query: 495 DYLLMVKSGDSTT-------QSRLEN------YLASGNKMRKEVLSHASLPCSPLNNHMY 541
+LL+ + + + +EN Y +K + V +SL C P
Sbjct: 519 HFLLLANENEVSDFVENLAEYNEVENTLLKRCYSLEPDKNEELVADASSLQCRPYQP--- 575
Query: 542 GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-EMG-ICTLYLPNN 599
E +LS++++L+ YC++LPSD + + TP +H K E G IC++ LP N
Sbjct: 576 -----SAEPGANSVSLSNAIALVNRYCAKLPSDTFTRLTPIWHEEKVENGYICSIRLPIN 630
Query: 600 CPI-QTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLLP--------------DIVV 642
P+ +TV + I TL ++AA C+ LH+ G L DNL P +
Sbjct: 631 SPVKKTVTSPPMINTLLARRAAAFMICQLLHKAGELDDNLQPIGKENFKVNEEDWNSSAL 690
Query: 643 EKHDAQKRGNEPYNAEHPIYF----PPELVNQSPQDTKITYH--------CYLIELKQHF 690
E+ D + P + Y+ L++ P + TY C L E +
Sbjct: 691 EESDEENLDPRPGTTKRRQYYYKKVADALLDCHPIIGQPTYFYKIVMKLTCPLPEEQNTR 750
Query: 691 NYDI-SARNIVLAMRTELESEIKKVN-FDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRF 748
I + EI K++ F + G ++V+L+ ++ + NQ+ R F
Sbjct: 751 GRKIYPPEDSPQGFGILTSKEIPKISAFPIFTRSGEVSVDLQLCSQLIVTENQICKIREF 810
Query: 749 QITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPS---TGQLIDWK---------TV 796
F ++ +L + L F D YL++P+ +DW TV
Sbjct: 811 LNYTFTSVL-----RLQKYLTLFN-PDASANSYLIVPTIDGATTTVDWDFIDLIYANLTV 864
Query: 797 ATVLFPRDNGSKHNMNCSTMFNARIV---HTKSGPLCTCKIHNSLVCTPHNGQIYCITGV 853
+ P + + + +A ++ + P Q + + +
Sbjct: 865 LPEIIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQP-----------------QYFYVAEI 907
Query: 854 LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYL--- 905
+LN S F T++++Y +Y IQ+ + LL+ R F Y+
Sbjct: 908 CSNLNPASDFP--GSDYATFEEYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTPRYVNRK 965
Query: 906 -------SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
S+ ++ ++E + L PELC I P S S + +P I++R+ +LLL
Sbjct: 966 GVALPTSSEATKRAKREKLEQKQILVPELCAI--HPFSASLWRKAVCLPCILYRINALLL 1023
Query: 959 AVNLK 963
A ++
Sbjct: 1024 ADQIR 1028
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLV--PKVVL 80
R YQ+E L++A K+NTIV S K I I LL+ +++ +R P A+F++ P
Sbjct: 17 REYQVELLDSAKKRNTIVCSSASSAKAFITIKLLQEFSHKMRVPHGKQALFVLDGPN--- 73
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
VP +K+ TDL V D + V+V T ++ + + ++
Sbjct: 74 VPIMTSHVKLLTDLTVTSI---------DKEENPPSLKASNVIVTTAEVCVLLCKKNFVH 124
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
L+ ++++D C + + IM + + + PRI G+TA + S++
Sbjct: 125 LDSYALIVID-CLYGGQQSLVREIMARY-----QAIQAPRPRILGLTAGLLGSEMQPDRL 178
Query: 201 DYWQKIHDLETLMNSKVYTCA 221
+ ++ LE L++S V T +
Sbjct: 179 E--AELQRLEKLLSSSVDTSS 197
Score = 45.4 bits (106), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 50/227 (22%)
Query: 1127 GIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 1186
+++D + ++ + +L+ + P++L++ALT +
Sbjct: 1314 ALQIDLAPQDARNEYDISETMTFKFDEQPNLVEHPGPSPNVLLQALTMSN---ANDGINL 1370
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN-DCYALSSVKHGLHKHIL- 1244
+RLE +GD+ L Y IT YLY+KY + G L+ +RS V+N + Y L K GL ++++
Sbjct: 1371 ERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSNLNLYRLGRRK-GLGEYMIA 1429
Query: 1245 --------------HASHELYKRI-------------------NITVDSF--------EK 1263
+ EL + + ++T+D E
Sbjct: 1430 TKFDPHDNWLPPCFYVPKELEEALIDAQFPANCWTVADMAATRDMTLDDICSMVRQRGES 1489
Query: 1264 LSLGSTFGWESVT--SFP-KALGDIIESLAGAIFVDSGCNREVVFQS 1307
LSL + + VT S P K++ D +E+L GA ++ G ++F +
Sbjct: 1490 LSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMA 1536
>gi|125586950|gb|EAZ27614.1| hypothetical protein OsJ_11558 [Oryza sativa Japonica Group]
Length = 258
Score = 196 bits (499), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGDA+LD+L T Y Y+KYP +P LTD+RSASVNN+CYA ++VK GL+KHILH+S
Sbjct: 46 RLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSS 105
Query: 1248 HELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQS 1307
EL+++++ ++ F + G ++GWE+ PK LGD+IES+AGAI++DS C++EVV++S
Sbjct: 106 SELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRS 165
Query: 1308 IRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEH 1367
++ LLEP+ TPET+ PV+ L E+C + F + + + G ++V V+A +
Sbjct: 166 MKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYE-KNHVDGVSSVIARVKAGETTYSA 224
Query: 1368 TFLDADKKTAKKVACKEVLKSLRASFPGT 1396
T K AKK+A K VLK L A T
Sbjct: 225 TKSGPCKLVAKKLASKAVLKDLIAGHKDT 253
>gi|426194802|gb|EKV44733.1| hypothetical protein AGABI2DRAFT_209093 [Agaricus bisporus var.
bisporus H97]
Length = 1524
Score = 196 bits (498), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 197/726 (27%), Positives = 323/726 (44%), Gaps = 126/726 (17%)
Query: 15 SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFL 74
+ D +P R YQ E LE ++K N I+ ++TGSGKT IA+ LR + R+PS A F
Sbjct: 8 AEDNIPTTRGYQQEMLEESIKHNIIIAMDTGSGKTHIAV--LRIKHEVEREPSK-AAWFF 64
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDG 133
P V L QQ I+ H + VG G + D W A W+ ++ H V+V TPQ+ LD
Sbjct: 65 APTVALCAQQKAVIQTHLPVSVGLVSGALEPDQWKSAELWERVLNTHRVIVSTPQVFLDA 124
Query: 134 LRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL----------PR 182
LR +Y L I +L+ DE HHA G H YA IM +FYHR +E +NL P
Sbjct: 125 LRHAYIDLGKDISLLVFDEAHHATGDHPYARIM-DFYHR-IEERPANLRLYGISQVSRPY 182
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
+ G+TASPI + +K +L+ ++ + T A L+ F+ F+ Y
Sbjct: 183 VLGLTASPIYGGDVVKSFNMLEK--NLDCIIRAPRRTRAE---LAQFV--HRPIFQHVMY 235
Query: 243 DEIPHALYT----------------------HLADELAMIE---LKHTRSLENLDLN-EA 276
++ P A ++ L +LA ++ ++ R + L +
Sbjct: 236 EQWPDAPFSTNLTVISNIVRSLQIEKDPYVISLRQKLATVKPLTSEYFRLDQKLSITIRT 295
Query: 277 QAELIRKKVSKINSTLLYCLSELGVW--------LALKAAETISCYESDFFAWEQLDGFG 328
Q + K + L +LG W +A KA E + + + +W+ D
Sbjct: 296 QKTFVFKGLRDFERAASDILLDLGPWAADWYVWRIAEKAREAANPFNNIMASWK--DTEK 353
Query: 329 ETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI 388
++K S A++T V G E +GD ++K+ LIE+LL + +
Sbjct: 354 SHLLKLLDS----AVLTPVSYGEEDIMGD----------CSDKLQRLIETLLNEKMETEK 399
Query: 389 R-----CIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS---------R 434
R ++FV+R T I L +L+ ++ ++ G + + S R
Sbjct: 400 RDEVYSGLVFVQRRDTVIALAEVLNNHPFTKNIFRIGFLLGTSDSSRRHSFLDISRKLAR 459
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+ Q E + EFR G +N+I+AT++ EEG+D+Q+C VI +D + + S+ QSRGRAR + S
Sbjct: 460 ETQEETMAEFRSGDLNLIIATAVAEEGIDIQACGSVIRWDLPQNMASWAQSRGRARKRRS 519
Query: 495 DYLLMVKSGDSTTQS-----RLENYLAS--GNKMRKEVLSHASLPCSPLNNHMYGEDFYH 547
+ LM +G Q+ LE + + R + SL ++ ++ +
Sbjct: 520 TFTLMFANGSQDEQNVRKWELLERRMVELYNDPARDLAMETESL----MDTDDDVDEIFF 575
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN-KEMGIC-------TLYLPNN 599
VEST ++ S++S + +C+ +P + P + I+ +M + + LP N
Sbjct: 576 VESTRASTSVHSAISHLAHFCAVIPIRAHVDIRPIYEIDPPDMPLAWHADPHRSNLLPYN 635
Query: 600 CPIQTVIAQGNIKTLK-----------------QAACLEACKKLHQIGALTDNLLP--DI 640
P + + L + EA L++ G L +NLLP +
Sbjct: 636 GPWGSKVILPRCLPLACREFSVPMKYSSKVSAHRHVAFEAYVGLYKAGLLNENLLPLTSV 695
Query: 641 VVEKHD 646
VV + D
Sbjct: 696 VVPQDD 701
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 230/508 (45%), Gaps = 73/508 (14%)
Query: 899 FHVQ-NYL--SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
FH + N+L +K R P L PE I + S Y+F +PS++ L+
Sbjct: 932 FHPRCNFLIPTKPRDPGSSAPEIKYVYLMPEFTGITLIS-STEVEYAF-LLPSVLRSLEI 989
Query: 956 LLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQL 1015
L +L++ L IP + A+T E ++ + LETLGD+ LK+ + Q+
Sbjct: 990 NLTMASLRSNLFMPSPSLQDIPLALLSNAMTASSAGEKYNYQRLETLGDTVLKFLVALQV 1049
Query: 1016 FKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW-------IIPGD 1068
Y HEG L+ KK+ ++N L K +L +I E + W ++P
Sbjct: 1050 LVEYPLWHEGYLTKKKDHTVANVNLAKENINHRLYRWIIKEIMLGRKWRPRYSTKLLPPT 1109
Query: 1069 NSGSYELNDDSLF----NGRKIYVTG---------RKKVKSKTVADVVEALIGAFLSTGG 1115
S E + L G ++ G + + +K +ADVVE+LIGA GG
Sbjct: 1110 TPLSEEKIVEELLMVVDEGAELSSKGAAKKKKKSKNQGLSTKILADVVESLIGAAYIHGG 1169
Query: 1116 ENVGLIFLDRIGIKVDFVNVPYQ-RQFQVHAERLVNV----RHLESLLNYSFRDPSLLVE 1170
+G G+ + ++ P + + F E N+ ++E +L Y+F+ LL+E
Sbjct: 1170 FPLGYECTKLFGLGLRWLPPPERIKDFLGAVEPDKNIPSALYYVEKMLGYTFKHKVLLLE 1229
Query: 1171 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LSPGYLTDMRSASVNND 1228
ALTH SY Y+R+EFLGD+VLD ++T YLY+ PG SPG++ RS+ VN
Sbjct: 1230 ALTHASYQQDARTVSYERMEFLGDSVLDMVVTDYLYHA-PGKNYSPGHIHLRRSSVVNTH 1288
Query: 1229 CYAL----SSVKHG---------------------LHKHILHASHELYKRINITVDSFEK 1263
A +SVK L + +LH+S + T F+K
Sbjct: 1289 FLAYICLKTSVKFDALMPRADDEGIELLADAQEVMLWQCLLHSSSRIMDDQANTHTRFKK 1348
Query: 1264 --------LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCN----REVVFQ-SI 1308
L + F W ++T PK DIIES+ GA+F+DS + R+V+ + I
Sbjct: 1349 RREEIEEGLMNDTIFPWAALTRLQAPKFFSDIIESVIGAVFLDSNGDIDTARDVITKLGI 1408
Query: 1309 RPLLEPMITPETMRFHPVRELTEYCQKN 1336
P LE ++ +HPV ++++ K+
Sbjct: 1409 LPTLERIVHDNVDVWHPVSRISQWASKH 1436
>gi|225684422|gb|EEH22706.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1469
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 248/992 (25%), Positives = 412/992 (41%), Gaps = 169/992 (17%)
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSGIQCQSRKKQNEIVEE 443
D +CI+FVE+ +A +L L S + RH +T + G + +G + S ++Q + +
Sbjct: 462 DTKCIVFVEKRHSATLLGELFSLIGTRHM--RTGVLIGVRTDEAGGEKVSFRQQFWTLLK 519
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR+G +N + A + + L Q C
Sbjct: 520 FRKGELNCLYAHMMERDNLIHQRC------------------------------------ 543
Query: 504 DSTTQSRLENYLASGNKMRK--EVLSHASL---PCSPLNNHMYGE---DFYHVESTGTIA 555
LE + N MR+ E L + L+ +Y E + V STG+
Sbjct: 544 -------LEEAQEAENIMRQFCESLPEDRIIRGASDELDKFLYKERCRKTFTVPSTGSKL 596
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKT 613
T +S+++++ Y S L + + I++ G +C + LP P++ + + +
Sbjct: 597 TYNSALAVLAHYASSLQYENEMSTRVNYFIHRIRGAFVCEVVLPEKSPVRGLTGRPAVAK 656
Query: 614 L--KQAACLEACKKLHQIGALTDNLL-------PDIVVEKHDAQKRGNEPYNAEHPIYFP 664
L KQ+A E C L + G L D L P + K + + Y+ +
Sbjct: 657 LSAKQSAAFETCLMLRKNGLLDDYFLSKYHKRLPLMRNAKLAIKSKKTNQYD----MMVK 712
Query: 665 PELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELES-EIKKVNFDLEVERG 723
P+L +S T H ++ L+ + +VL R L + + + ++E
Sbjct: 713 PKLWEKSRGMTPYEVHATVLTLRPSAKLRRVHQPLVLLTRESLPKFPVFPLYLETDIECD 772
Query: 724 RLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLL 783
+++ L+ +Q+ +++ L F + +F+ + D ++ + +LE +L
Sbjct: 773 VVSIPLR--ASMQVSQSELDLFTTFTLRIFQDLFHKVYDHQPAMMPYWLAPISLEYGNVL 830
Query: 784 LPST-GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP 842
S QLIDWK + V N I T P + + N +
Sbjct: 831 EDSNLRQLIDWKIIQHV----------------QENPEICWTSDMPRSS--LENIFMFDK 872
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEER---YGIQL-----------CFD 888
+G+ T L LN L + T K+ Y + Y I L C
Sbjct: 873 WDGRYRYFTSEL-ELN---LRPSDPPPPTMAKRRYMDNIMNYCISLYKNSRLKFLETCDW 928
Query: 889 REPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPS 948
+P++ + +N L + + K +E ++ + PE RI P ++ F +FTF P+
Sbjct: 929 NQPVVRAELVRLRRNLLDRTTEHKGEE---TAYYICPEPLRISALPAPVAVF-AFTF-PA 983
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH------------- 995
++ R++S L+A+ N L Q IP + LEA+T + H
Sbjct: 984 MISRIESYLIALEACNKL-----QLTIIPEL-ALEALTKDSDNTEEHRAEQIHFQRGMGK 1037
Query: 996 -LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
E LE LGD FLK + S LF ++ E VK+ +I N L + F+R
Sbjct: 1038 NYERLEFLGDCFLKMSTSISLFAMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVR 1097
Query: 1055 TESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK--VKSKTVADVVEALIGAFLS 1112
T+ F + W G L G+ T K + K++AD+ EALIGA L
Sbjct: 1098 TQGFSRRNWYPEGIK----------LLQGKAKSETAENKHSLADKSIADICEALIGASLL 1147
Query: 1113 TGGE---------------NVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESL 1157
+GG N G + V ++P + + +L + +
Sbjct: 1148 SGGRVHRFDTAVKAVTAFVNSGNHQVSDWQSYVGLYSLPRYQIAEADDTQLDLAQQIGDR 1207
Query: 1158 LNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
L Y F+ P LL A TH SY ++P CYQRLEFLGD++LD + +LY+KYP P
Sbjct: 1208 LGYRFKYPRLLSSAFTHASYPTGWSKVP-CYQRLEFLGDSLLDMVCVEHLYHKYPDRDPQ 1266
Query: 1216 YLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN---ITVDSFEKLSLGSTFGW 1272
+LT+ + A V+N +VK GLH+H+L+ S L +I +++ E S+ S W
Sbjct: 1267 WLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSKALLGQITRYAEEIEATETESIDSPDFW 1326
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ + PK L D++E+ GAIFVDS + EVV
Sbjct: 1327 TTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1358
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 128/255 (50%), Gaps = 33/255 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R YQLE E A N I L+TGSGKTLIA++LL+ A R P ++ FLV
Sbjct: 99 REYQLELFEKAKTTNIIAVLDTGSGKTLIAVLLLKHMIRIELADRARGKPPRISFFLVDS 158
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA +K + D + K+ G + D W TWK SK+ ++V T ++L L S
Sbjct: 159 VTLVYQQAAVLKANIDQSIDKFCGALQTDLWSKETWKRHFSKNMIIVCTAEVLYQCLLHS 218
Query: 138 YFKLNMIKVLILDECHHARGKHQYA-------------------CIMTEFYHRLLETGDS 178
+ ++ I +LI DE HH + H YA I+ +FY ++ E+
Sbjct: 219 FIQMEQINLLIFDEAHHTKKDHPYARLEGSMFSAHSVSVADGIYRIVKDFYLQMTES--Q 276
Query: 179 NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK 238
+ P+IFGMTASP+ +KV D + LE L++S++ T ++ L + T +
Sbjct: 277 HRPKIFGMTASPVDAKV-----DVVTAVKSLEMLLDSQIATASNLDALRQSVARPTE--Q 329
Query: 239 FYKYDEIPHALYTHL 253
+ YD + A T L
Sbjct: 330 EWVYDRLDPAFETDL 344
>gi|408399323|gb|EKJ78431.1| hypothetical protein FPSE_01388 [Fusarium pseudograminearum CS3096]
Length = 1860
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 295/632 (46%), Gaps = 69/632 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS------YAYLLRKPSPFVAVFLVP 76
R YQ+E E A ++NTIV L TGSGKTLIA +LLR KP VA F+V
Sbjct: 440 REYQIELFERAKRENTIVVLPTGSGKTLIAALLLRHCLEQELEDRAAGKPKR-VAFFVVE 498
Query: 77 KVVLVPQQAEAIKMHTDL-KVGKYWGDM-GVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
KV L QQ + + V K+WG M G D W ++ S + +V T QILLD L
Sbjct: 499 KVALCFQQFAVLNCNLGAYPVTKFWGKMSGTKTKD--YWNKQFSDNMAIVCTAQILLDCL 556
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
++ ++ I +L+ DE HHA+ +H YA I+ H + GD PRI GMTASP+ ++
Sbjct: 557 NSNFINMSQINLLVFDEVHHAKKEHPYARIIKN--HYVHHEGDK--PRILGMTASPVDAQ 612
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
+D+ ++ET + SK+ T + + VL+N + + YD AL
Sbjct: 613 T----KDFEGTAVEIETFLCSKIATVSGD-VLANSMDLRKQLQEKAYYD----ALRFPEE 663
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-LALKAAETISC 313
+ A+ EL + L N L +A E + S + S +C W L + ET+
Sbjct: 664 SKTALRELIVGQILHNA-LFKASLEFTEEASSTLGS---WCADRY--WHLLITEDETMQL 717
Query: 314 Y---ESDF---FAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGL 367
+ +F FA + DG + + + + L PS S+
Sbjct: 718 AAKTDREFAKSFASIKADGATDAVRRVRDIVKNNVLGIVRPSSPGLSVK----------- 766
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS 427
+K+ ++ + + G + RCI+FVE+ TA +L L + Y+ G S
Sbjct: 767 -VKKLHEILLNAFTFNGTK--RCIVFVEKRYTACLLSDLYQQPEMGIRGMNASYMIGRQS 823
Query: 428 GIQ---CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
I S + Q ++ F+RG VN + AT + EEG+D+ C+LV+ FD +V ++Q
Sbjct: 824 SISNIGGMSFRDQVITLQRFKRGDVNCLFATPVAEEGIDIPDCDLVVRFDLFNSVIQYLQ 883
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS---------LPCSP 535
SRGRAR Q S Y+ M++ G+S L+ + K ++S S P +
Sbjct: 884 SRGRARQQRSKYITMLEHGNSKQIRSLKQAERDAASLEKFIMSLPSDRKLQDESMDPVTA 943
Query: 536 LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE--MGICT 593
N + + Y + STG T S S+ ++ + S L S +F ++K+ I
Sbjct: 944 TQNELTTQKVYVMPSTGARLTFSISLGVLAKFTSSLSSSD--NGNLEFVVSKQGPTFIAD 1001
Query: 594 LYLPNNCPIQTV--IAQGNIKTLKQAACLEAC 623
+ LP++ P++++ I Q + K +A EAC
Sbjct: 1002 VILPDSSPLRSMSGIPQRSKALAKCSAAFEAC 1033
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 212/461 (45%), Gaps = 74/461 (16%)
Query: 928 CRIIMAPISLS------TFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIK 980
C +I+ P+ +S F + TF P+I++R++S+L+A LD C ++TIP
Sbjct: 1322 CFVILEPLRVSPIPIDVVFMTMTF-PAIINRIESILIA-------LDACASLDLTIPPAL 1373
Query: 981 VLEAITTKKC--------QEDF------HLESLETLGDSFLKYAASQQLFKTYQNNHEGL 1026
L+A+T Q +F + E LE LGDSFLK A + LF ++E
Sbjct: 1374 ALQALTKDGGGTGDLDVKQSNFQPGMGDNYERLEFLGDSFLKMATTISLFTLIPESNECG 1433
Query: 1027 LSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKI 1086
++ +I N L G E L +IR++SFD + W D L G+
Sbjct: 1434 YHAERVLLICNQNLFNHGVEHNLHQYIRSKSFDRRAW-----------YPDLPLKKGKVT 1482
Query: 1087 YVTGRKKVKSKTVADVVEALIGAFLSTGGE---NVGLIFLDRI----GIKVDFVNVPYQR 1139
T + KT+ADV EALIGA +G E ++G+ + R+ +++F Y
Sbjct: 1483 KTTMTHDLADKTIADVCEALIGAAYLSGEEGNMDMGVKAVTRMVKSKNHEMEFFR-DYFA 1541
Query: 1140 QFQV---HAERLVNVRH-----LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
F+V H + ++ + + Y F +LL H S+ +P YQRLEF
Sbjct: 1542 AFKVPPWHTAKSTTLQRRLVDCVAKVTGYRFNSSALLQSVFKHPSWPYEAVPD-YQRLEF 1600
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGDA+LD ++ +LY ++ P +LT+ + A V+N V+ LHKH+L + L
Sbjct: 1601 LGDALLDMVVVDFLYKRFKLADPQWLTEHKMAMVSNQFLGCLCVQLNLHKHLLFTTSSLT 1660
Query: 1252 KRINITVDSFE-------KLSLGSTFG-----WESVTSFPKALGDIIESLAGAIFVDSGC 1299
+I+ V E K++ + W + PK L D+ E+L GA+FVD+
Sbjct: 1661 GQISEYVAELELAKEDAHKVAKANRTPTRMDFWLHASLPPKVLADVAEALIGAMFVDAKY 1720
Query: 1300 NREVVFQSIRPLLEPMITPETM-----RFHPVRELTEYCQK 1335
N VV Q +EP T + HPV L + Q+
Sbjct: 1721 NYSVVNQFFTRFVEPYFTEMVLYDTFASQHPVTVLCKKMQQ 1761
>gi|391341486|ref|XP_003745061.1| PREDICTED: endoribonuclease Dicer [Metaseiulus occidentalis]
Length = 1863
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 223/466 (47%), Gaps = 61/466 (13%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P I +L+A+T + +LE LET+GDSFLKYA + L+ TY HEG LS + + IS
Sbjct: 1360 PAI-LLQALTMSNANDGINLERLETVGDSFLKYAITNYLYCTYLGVHEGKLSFLRSKQIS 1418
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPK-MWIIPG-----------------DNSGSYELNDD 1078
N L +LG E + + F+P W+ PG ++ + D
Sbjct: 1419 NVNLYRLGKELGIGSLMVATKFEPSDNWLAPGFCIPEGLEKAVLDSKIPNSHCNISQFKD 1478
Query: 1079 SLFNGRKIYVT----GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD--- 1131
+G +V + K++AD +EALIGA+L + G L + G++V
Sbjct: 1479 GEASGEGEFVPYSLLTHHSIPDKSIADCLEALIGAYLVSCGRCNTLKCMTWFGLRVLPLD 1538
Query: 1132 ---------FVNVPYQRQFQVHAERLVNVRH----LESLLNYSFRDPSLLVEALTHGSYM 1178
F +P L + H E + Y F++ L++A TH SY
Sbjct: 1539 CEGDAFASLFKKIPPPLPASYDERVLRQLLHGHVSFEERIGYKFKNKGFLLQAFTHASYH 1598
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLY-NKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
+ CYQRLEFLGDAVLDYLIT YLY + SPG LTD+RSA VNN +A +VK+
Sbjct: 1599 YNTLTDCYQRLEFLGDAVLDYLITRYLYEDPVKQHSPGALTDLRSALVNNTFFAALAVKY 1658
Query: 1238 GLHKHILHASHELYKRINITVDS---------FEKLSLG-STFGWESVTSFPKALGDIIE 1287
HK+ L+ S L+K I+ V + FEK LG PKALGDI E
Sbjct: 1659 EFHKYFLNLSPRLFKLIHRFVSTKKHLSGKQYFEKYYLGEDECEEAEEIEVPKALGDIFE 1718
Query: 1288 SLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFH----PVRELTEYCQKNHFSMKKP 1343
S+AGAI++DSG + + + +++P I E H P+REL E + K
Sbjct: 1719 SVAGAIYLDSGMSLDTTWNVYLAMMKPEI--EYFSKHVPKSPIRELLELEPQTAKFEKAE 1776
Query: 1344 VASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
+ ++GK V VEV G + +K+ AK A K L+S+
Sbjct: 1777 LT--LNGKIRVKVEVFGKGSFIG---IGRNKRIAKCTAAKRALRSV 1817
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 265/1160 (22%), Positives = 450/1160 (38%), Gaps = 191/1160 (16%)
Query: 25 YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQ 84
+Q+E L A + V + K + + Y LR PS + LV V L +
Sbjct: 39 FQVELLAEAKRGGNKVIFISVLDKPFFIVNFTKENGYWLRPPSASIDKLLV--VCLSSTE 96
Query: 85 A----EAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
+ + +TDL D D ++ +S V++ P + LS F
Sbjct: 97 MLSTFQWLDDYTDLTCVCLDPDADED----EGLEKRLSNSSVILTVPTAIS---TLSEFS 149
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
L VLI D C YA LL+ R+ G+T + S V S+E
Sbjct: 150 LKFCTVLI-DRCE------SYAETDIAGSANLLKLIADRKLRVVGLTNA--LSGVGSAET 200
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFK----FYKYDEIPHALYTHL-AD 255
+I +LE ++ C +VLS + P K FY ++ + + L +
Sbjct: 201 AR-SRIQNLEKYWKAQATVCNDLTVLSKYGPKPEEKVLEYGIFYADKDVEYDMVLDLIEN 259
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI---- 311
L +E+ +L L +E+I++ + + L Y LG W A +AA+
Sbjct: 260 NLKFLEM-------SLKLKGNYSEVIQEAM-RYPMELAYVFLTLGPWCAAEAAQEFLGEV 311
Query: 312 --SCYESDFFAWEQLDGFGETIIKKFGS---DASQALVTYV---PSGAEWSIGDDSKFNL 363
S ++ Q+ I+ F + + LV V PS A +I D NL
Sbjct: 312 SRSIDNLEYLTDIQISKTTLQIVFTFLQQFLELCRILVDLVKCDPSEAN-AIHPDKLTNL 370
Query: 364 -DSGLLTEKIVCLIESLLEYRGVEDIRCI------------IFVERVITAIVLQSLL--- 407
D+ LL K + + E C+ I V ITA+V+ L
Sbjct: 371 MDAILLYTKPKMVPSQISEDGKKSKPHCVPWHEDPTALCGLIIVRHRITALVVNRWLETV 430
Query: 408 SELLPRHCTWKTKYIAG------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
S+ +P K+ +I G ++ + +Q E++++FR N+++ T+ E+
Sbjct: 431 SKTVPSLAFVKSNFIIGQTTLDGDDPELVAAGLTRQEEVLQKFRYRDYNLLITTTATEDT 490
Query: 462 LDVQSCNLVIMFDPSRTVCSFI--QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
L++ CNLV+ FDP + S+I +++ +A + + + +M+ ++ ++ + +
Sbjct: 491 LELPHCNLVVRFDPPESYKSYIVCKAKAKASSKCARFFIMLSQYET---AKFTHLFSDYR 547
Query: 520 KMRKEVL--SHASLPCSPLNNHMYGEDFY--HVESTGT--IATLSSSVSLIYFYCSRLPS 573
KM +L SH + + D + S+G +ATLS+S+++I YC RLPS
Sbjct: 548 KMEGLLLERSHQEDVTTEGDEGASPSDLERCYRPSSGDCLVATLSNSIAIINRYCLRLPS 607
Query: 574 DGYFKPTPKFHINK---EMGICTLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLH 627
D K P F INK + C L LP N P++ I + T KQ L A ++LH
Sbjct: 608 DTLTKLAPVFRINKLPDDTYQCVLRLPINSPLKEEIVGEPMATPVLAKQDVSLRALERLH 667
Query: 628 QIGALTDNLLP-----------DIVVEKHDAQKRG-NEPYNAEHPIYFPPELVN--QSPQ 673
+ G + D+L P D VV + G P + Y+ L Q
Sbjct: 668 KRGEIDDHLSPFGKDSLKAKTEDQVVPLDETVAHGAARPGTTKRRQYYHKSLAPPFQGTL 727
Query: 674 DTKITYHCYLIELK------QHFN------YDI--SARNIVLAMRTELESEIKKVNFDLE 719
DT+ T+ Y I +K + N YD S R T L F +
Sbjct: 728 DTE-TFFLYNISMKLLCAIPEEQNSRARTIYDPADSPRGFGFVSGTRL---TPLCPFPIY 783
Query: 720 VERGRLTVNLKHLG-RIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLE 778
G + V+++ L + L Q F +FR ++ +L + F+L+ +
Sbjct: 784 TRSGEVMVDVEELSCALPLTEEQRKKAEFFHAYVFRDVL-----RLEKFPMKFDLKAS-R 837
Query: 779 IDYLLLPSTGQLIDWKTVATVLFPRDNGSKHNMN----CSTMFNARIVHTKSGPLCTCKI 834
+L++P T ++W + ++ D H ++ S FN +I
Sbjct: 838 AGFLIIPITDGSVEWSFIDRIM-NEDEFKPHKVDEEERRSFTFNR-------------EI 883
Query: 835 HNSLVCTP-----HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDR 889
+ V P Q + + + L S F T+ +Y +Y I +C
Sbjct: 884 FSDAVVMPWYRNIDKPQFFYVANICEQLTPVSEFPAT--PFKTFDDYYRHKYNIGICNKS 941
Query: 890 EPLLN----------------GRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMA 933
+PLL+ R+ + + R+ K++ + L PELC ++
Sbjct: 942 QPLLDVDHTSARLNLLTPRYVNRKGVSLPTSSEESRKAKRENLQQKQI-LVPELC--LIH 998
Query: 934 PISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQED 993
P S + +P I++R+ LLLA +++ +++ C + + E
Sbjct: 999 PFPASLWRKVVCLPCILYRMNHLLLADSIRMRIVNAC-------------GVGKAELPEG 1045
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERI--ISNA---ALCKLGCEQK 1048
F + L T G + + + K E V +ERI I NA L K G E
Sbjct: 1046 FKWKML-TFGWTLTEVLKENAMLKQSVPVTEK-EPVNEERIAEIRNAYLGGLRKGGVELT 1103
Query: 1049 LPGFIRTESFDPKMWIIPGD 1068
G + ++FDP IP D
Sbjct: 1104 PDGQLVIDTFDPSKVTIPND 1123
>gi|409076508|gb|EKM76879.1| hypothetical protein AGABI1DRAFT_77978 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1528
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 190/712 (26%), Positives = 321/712 (45%), Gaps = 116/712 (16%)
Query: 15 SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFL 74
+ D +P R YQ E LE ++K N I+ ++TGSGKT IA+ LR + R+PS A F
Sbjct: 8 AEDNIPTTRGYQQEMLEESIKHNIIIAMDTGSGKTHIAV--LRIKHEVEREPSK-AAWFF 64
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDG 133
P V L QQ I+ H + VG G + D W A W+ ++ H V+V TPQ+ LD
Sbjct: 65 APTVALCAQQKAVIQTHLPVSVGLVSGALEPDQWKSAELWERVLNTHRVIVSTPQVFLDA 124
Query: 134 LRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL----------PR 182
LR +Y L I +L+ DE HHA G H YA IM +FYHR +E +NL P
Sbjct: 125 LRHAYIDLGKDISLLVFDEAHHATGDHPYARIM-DFYHR-IEERPANLRLYGISQVSRPY 182
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
+ G+TASPI + +K +L+ ++ + T A L+ F+ F+ Y
Sbjct: 183 VLGLTASPIYGGDVVKSFNMLEK--NLDCIIRAPRRTRAE---LAQFV--HRPIFQHVMY 235
Query: 243 DEIPHALY----THLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL-- 296
++ P A + T +++ + ++++ + +L A A+ + + +++ L +
Sbjct: 236 EQWPDAPFSTNLTVISNIVRSLQIEKDPYVISLRQKLATAKPLTSEYFRLDQKLSITIRT 295
Query: 297 SELGVWLALKAAETISC--------YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP 348
+ V+ L+ E + + +D++ W + A +A +
Sbjct: 296 QKTFVFKGLRDFERAASDILLDLGPWAADWYVW------------RIAEKAREAANPFNN 343
Query: 349 SGAEWSIGDDSKF--NLDSGLLT------EKIVC--------LIESLLEYRGVEDIR--- 389
A W + S LDS +LT E I+C LIE+LL + + R
Sbjct: 344 IMASWKDTEKSHLLKLLDSAVLTPVSYGEEDIMCDCSDKLQRLIETLLNEKMETEKRDEV 403
Query: 390 --CIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS---------RKKQN 438
++FV+R T I L +L+ ++ ++ G + + S R+ Q
Sbjct: 404 YSGLVFVQRRDTVIALAEVLNNHPFTKNIFRIGFLLGTSDSSRRHSFLDISRKLARETQE 463
Query: 439 EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLL 498
E + EFR G +N+I+AT++ EEG+D+Q+C VI +D + + S+ QSRGRAR + S + L
Sbjct: 464 ETMAEFRSGDLNLIIATAVAEEGIDIQACGSVIRWDLPQNMASWAQSRGRARKRRSTFTL 523
Query: 499 MVKSGDSTTQS-----RLENYLAS--GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVEST 551
M +G Q+ LE + + R + + SL ++ ++ + VEST
Sbjct: 524 MFANGSQDEQNVRKWELLERRMVELYNDPARDLAMENESL----MDTDDDVDEIFFVEST 579
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN-KEMGIC-------TLYLPNNCPIQ 603
++ S++S + +C+ +P + P + I+ +M + + LP N P
Sbjct: 580 RASTSVHSAISHLAHFCAVIPIRAHVDIRPIYEIDPPDMPLAWHADPHRSNLLPYNGPWG 639
Query: 604 TVIAQGNIKTLK-----------------QAACLEACKKLHQIGALTDNLLP 638
+ + L + EA L++ G L +NLLP
Sbjct: 640 SKVILPRCLPLACREFSVPMKYSSKVSAHRHVAFEAYVGLYKAGLLNENLLP 691
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 230/507 (45%), Gaps = 71/507 (14%)
Query: 899 FHVQ-NYL--SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
FH + N+L +K R P L PE I + S Y+F +PS++ L+
Sbjct: 932 FHPRCNFLIPTKPRDPGSSAPEIKYVYLMPEFTGITLIS-STEVEYAF-LLPSVLRSLEI 989
Query: 956 LLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQL 1015
L +L++ L IP + A+T E ++ + LETLGD+ LK+ + Q+
Sbjct: 990 NLTMASLRSNLFMPSPSLQDIPLALLSNAMTASSAGEKYNYQRLETLGDTVLKFLVALQV 1049
Query: 1016 FKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW-------IIPGD 1068
Y HEG L+ KK+ ++N +L K +L +I E + W ++P
Sbjct: 1050 LVEYPLWHEGYLTKKKDHTVANVSLAKENINHRLYRWIIKEIMLGRKWRPRYSTKLLPPT 1109
Query: 1069 NSGSYELNDDSLF----NGRKIYVTG--RKKVKSKT-------VADVVEALIGAFLSTGG 1115
S E + L G ++ G RKK SK +ADVVE+LIGA GG
Sbjct: 1110 TPLSEEKIVEELLMVVDEGAELSSKGAARKKKNSKNQGLSTKILADVVESLIGAAYIHGG 1169
Query: 1116 ENVGLIFLDRIGIKVDFVNVPYQ-RQFQVHAERLVNVR----HLESLLNYSFRDPSLLVE 1170
+G G+ + ++ P + + F E N+ ++E +L Y+F+ LL+E
Sbjct: 1170 FPLGYECTKLFGLGLRWLPPPERIKDFLGAVEPDKNIPSALYYVEKMLGYTFKHKVLLLE 1229
Query: 1171 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY-PGLSPGYLTDMRSASVNNDC 1229
ALTH SY Y+R+EFLGD+VLD ++T YLY+ SPG++ RS+ VN
Sbjct: 1230 ALTHASYQQDARTVSYERMEFLGDSVLDMVVTDYLYHAPDKNYSPGHIHLRRSSVVNTHF 1289
Query: 1230 YAL----SSVKHG---------------------LHKHILHASHELYKRINITVDSFEK- 1263
A +SVK L + +LH+S + T F+K
Sbjct: 1290 LAYICLKTSVKFDALMPRADDEGIELLADAQEVMLWQCLLHSSSRIMDDQANTHTRFKKR 1349
Query: 1264 -------LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDS----GCNREVVFQ-SIR 1309
L + F W ++T PK DIIES+ GA+++DS G R+V+ + I
Sbjct: 1350 REEIEEGLMNDTIFPWAALTRLQAPKFFSDIIESVLGAVYLDSNGDIGTARDVITKLGIL 1409
Query: 1310 PLLEPMITPETMRFHPVRELTEYCQKN 1336
P LE ++ +HPV ++++ K+
Sbjct: 1410 PTLERIVHDNVDVWHPVSRISQWASKH 1436
>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1374
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 185/673 (27%), Positives = 299/673 (44%), Gaps = 104/673 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETG--------------------SGKTLIAIMLLRSYAY- 61
R YQ+E E A QNTI L+TG SGKTLIA++LL+
Sbjct: 5 REYQVELFERAKSQNTIAVLDTGTCIQAQLDVIPFFSPNCTTGSGKTLIAVLLLKHIIQN 64
Query: 62 -LLRKPS---PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM 117
L+ + + P ++ FLV V L QQA ++ + D V +++G MG D W TW +
Sbjct: 65 ELIDRANGKPPRISFFLVDSVTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQF 124
Query: 118 SKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD 177
+ V+V T +IL L SY +++ I +LI DE HH + H YA I+ E Y L+
Sbjct: 125 ENNMVIVCTAEILNQCLLNSYIRMDQINLLIFDEAHHTKKDHPYARIIRESY---LKADP 181
Query: 178 SNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI--PFSTA 235
+ PRIFGMTASPI +K D + LE L++SK+ T + ++L + P +
Sbjct: 182 TKRPRIFGMTASPIDTK-----GDIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEES 236
Query: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
++YD++ T L L QA +S + +
Sbjct: 237 ----WEYDKLDPPFATKLYQIL-------------------QARF--GDISSLQPVFRFT 271
Query: 296 L---SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAE 352
L SELG A +A Y +L+G + + S Q + + E
Sbjct: 272 LQASSELGPCCADRAW----AYALADDVLPKLEGNVRKLAQSISSPIPQCALKEISRIQE 327
Query: 353 WS-IGDDSKFNLDS--GLLTEKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLS 408
S I + FN + G L+ K+ L + L++Y +CI+F ++ TA +L L S
Sbjct: 328 ASDIVKNHSFNSPNVPGELSPKVQLLRQKLIKYFEHPTKTKCIVFTQKRYTAKMLFDLFS 387
Query: 409 ELLPRHCTWKTKYI---------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
T + Y+ +G+ G+ R++ +V +FR G +N + ATS+ E
Sbjct: 388 -------TLEIPYLRPGVLIGVRSGDIVGMNVSFRQQFLALV-KFRSGEINCLFATSVAE 439
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EGLD+ CNLV+ FD T+ ++QSRGRAR +S Y M++ ++ +RL +
Sbjct: 440 EGLDIPDCNLVVRFDLYNTLIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEK 499
Query: 520 KMRK--EVLSHASL---PCSPLNNHMYGED---FYHVESTGTIATLSSSVSLIYFYCSRL 571
M+ E L + S +++ + GE+ + + +TG T S+++++ Y S L
Sbjct: 500 LMQSFCETLPEDRILHGIDSEIDSILQGEEEKRTFIIRATGAKLTYHSALAILARYASSL 559
Query: 572 PSDGYFKPTPKFHI------NKEMGICTLYLPNNCPIQ--TVIAQGNIKTLKQAACLEAC 623
++ +C + LP P++ T + KQ+A + C
Sbjct: 560 VRTVQYEKETSAQATYVVLPQNNSFVCEVILPEKSPVRGLTGVPASKKSAAKQSAAFDTC 619
Query: 624 KKLHQIGALTDNL 636
L + L D+
Sbjct: 620 VLLRKHKLLDDHF 632
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 187/445 (42%), Gaps = 86/445 (19%)
Query: 928 CRIIMAPISLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKV 981
C + + P+ +S S P+I++RL + L+A L+ C ++++
Sbjct: 908 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIA-------LEGCKTLDLSVKPEYA 960
Query: 982 LEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
LEA T + H E LE LGD FLK A S LF ++ E
Sbjct: 961 LEAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDF 1020
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--- 1084
V + +I N L +++L + R+ F W G +L +GR
Sbjct: 1021 HVNRMCLICNKNLFNTALKKELYQYTRSRGFSRHTWYPDGL----------TLLHGRDHR 1070
Query: 1085 -KIYVTGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN-------- 1134
KI + ++ KTVADV EALIGA L +GG N + + + VD N
Sbjct: 1071 KKISAESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWAD 1130
Query: 1135 ------VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCY 1186
+P + L R +E L Y F+ P LL A TH SY ++P CY
Sbjct: 1131 YTSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CY 1189
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD------------------MRSASVNND 1228
QRLEFLGD++LD + L+ +YP P +LT+ ++ A V+N
Sbjct: 1190 QRLEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKVSVRLFVSTKHLLTITLQMAMVSNK 1249
Query: 1229 CYALSSVKHGLHKHILHASHELYKRIN---ITVDSFEKLSLGSTFGW------ESVTSFP 1279
+VK GLH H+ H S+ L +I + + E S G+ W V P
Sbjct: 1250 FLGALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKVRRCP 1309
Query: 1280 KALGDIIESLAGAIFVDSGCNREVV 1304
L D++E+ GA FVDS VV
Sbjct: 1310 GCLPDMVEAYLGAAFVDSDFQFRVV 1334
>gi|336386278|gb|EGO27424.1| hypothetical protein SERLADRAFT_446652 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1267
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 255/1018 (25%), Positives = 410/1018 (40%), Gaps = 150/1018 (14%)
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q+E +F G N++V T E LD+ + +LVI +D + S+I + +S
Sbjct: 156 QDETCRKFSLGTHNLLVITKS-NEDLDISASSLVIKYDLFESQLSYIYAWCHTGRCHSYL 214
Query: 497 LLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIAT 556
+ M + GD T + L + + R + L H ED H + T
Sbjct: 215 VHMAEKGDETHRRILSELTSFSQENRTSIEKFKEYRGRFLLPHKL-EDTIHSYDSQTEDE 273
Query: 557 LSSSVSLIYFYCS-------------RLPSDGYFKPTP----KFHINKEMG-------IC 592
SVSL S RL + Y P F INK + C
Sbjct: 274 GEKSVSLKDPVTSNRICLRDATSTVYRLAAAMYDVEKPFDVELFRINKHLDEQGSWTYSC 333
Query: 593 TLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVE------ 643
+ LP + P V + T +++AC C +L G L L P ++
Sbjct: 334 NVMLPAH-PTLRVFTGSSCPTPADARRSACYYTCTELFNAGVLDYRLFPQQRLKPARFLE 392
Query: 644 -------KHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISA 696
K+ + K G N +P P N T + ++ L F+ D A
Sbjct: 393 DDFEEPKKNMSNKNGQATPNHLYPRRKPAFWSNSLTAVFNDTLYPVMVALSG-FSPDQYA 451
Query: 697 RNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVI 756
++L R L + +F L ++L G +++ NQ+ L ++ + + R++
Sbjct: 452 -PVLLLTRHPLP---RMHDFKLFFSGISAPLHLAWGGPLEVDQNQLALLHQYTLRICRIV 507
Query: 757 MDHNLD-KLNEI------LDGFELRDNLEIDYLL-LPSTGQLIDWKTVATVLFPRDNGSK 808
+ LNE+ L R + ++ +P + I W++V
Sbjct: 508 ANKPFACPLNEMAYFYAPLKSDCTRTSSQVQSKWNIPDFSEFICWESVRIA--------- 558
Query: 809 HNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNG 868
+ +T N R V + I + V + L ++ + R
Sbjct: 559 -SRQWATPLNWRNVEDLANDTADAVIQDRWVEFTRRYYVVKTRPDLSPMSKPADSPREAA 617
Query: 869 SVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPEL 927
+ R G+ D+E PL+ + + N+LS + + L PEL
Sbjct: 618 YPNLLEYCKSRRKGLDCLVDQEQPLIEVSKTPGLSNHLSPTFRPLTTSAKASAKYLIPEL 677
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT 987
C + P S T + +PSI R+ +L+ L +H + + L AI+T
Sbjct: 678 CAKLTIPAS--TLRTALLLPSISRRIDDILIVKELNAKFFNHHITEELL-----LAAIST 730
Query: 988 KKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
D+ E LE LGD+FLKY +S +F T +EG L V +++IISN AL K C
Sbjct: 731 PSAGFDYDYERLEVLGDAFLKYLSSIYVFVTNPAKNEGALHVSRQQIISNKALLKTACTV 790
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGS----YELNDDSLFNGRK-------------IYVTG 1090
LP FI++ F K+W P + S + NDD+ + I
Sbjct: 791 GLPPFIQSRPFSYKVWQPPNFSLVSIREDFTPNDDTKKISKAPSQSPLARKETEAIMEAP 850
Query: 1091 RKKVKS----------------------------------KTVADVVEALIGAFLSTGGE 1116
KK++S K +ADVVEA+IGA +GG
Sbjct: 851 PKKIESEDSVKGKALPGSHASSKKENRGQQDTQYTQWLGDKAIADVVEAIIGAAYISGGR 910
Query: 1117 NVGLIFLDRIGIKV-------DFVNVPYQRQFQVHAE-RLVNVRHLESLLNYSFRDPSLL 1168
++ L + I + DF +V A+ R ++ +E+++ + F P LL
Sbjct: 911 DLALTTAKTLDIPIRNIEHWADFGRKALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLL 970
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
+ALTH S + CY+RLEF+GDA+L++++ +++N+ +SPG LT M+ A V+N
Sbjct: 971 AQALTHASVQGYQ-STCYERLEFIGDAILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNS 1029
Query: 1229 CYALSSVKHGLHKHILHASHELYKRINITVDSF-----EKLSLGS----TFG--WESVTS 1277
A V GLH+HIL+ S L I +D E+ L + T G W V
Sbjct: 1030 ALAAVCVWSGLHEHILYESFPLAGNIQGYIDELKKKQTEEYELAAREQRTPGQFWLDVEP 1089
Query: 1278 FPKALGDIIESLAGAIFVDSG---CNREVVFQSI-RPLLEPMITPETMRFHPVRELTE 1331
PKAL D++ES+ GAI++ G E+VF +I +P IT +T+ HP + + E
Sbjct: 1090 -PKALSDVVESIIGAIYISDGFQPIGSELVFNNILKPFYNKHITLKTLSHHPTKVILE 1146
>gi|194744012|ref|XP_001954492.1| GF18290 [Drosophila ananassae]
gi|190627529|gb|EDV43053.1| GF18290 [Drosophila ananassae]
Length = 2252
Score = 193 bits (491), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 238/537 (44%), Gaps = 143/537 (26%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1727 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1785
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWI------------------IP----------- 1066
N L +LG ++L ++ F+P W+ IP
Sbjct: 1786 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1845
Query: 1067 -------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKSK 1097
G SG + ++DS N ++ + + K
Sbjct: 1846 IKNLSSVQICELVREKAEALGLEQNGPQSGQLDDSNDSC-NDFSCFIPYNLVSQHSIPDK 1904
Query: 1098 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ-------------FQVH 1144
++AD VEALIGA+L G L+F+ +GI+V +P+ RQ +
Sbjct: 1905 SIADCVEALIGAYLIECGPRGALLFMAWLGIRV----LPFTRQPAEQEEAKRVPGSSKSD 1960
Query: 1145 AERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTHG 1175
AE +V V E+ L Y FRD S L++A+TH
Sbjct: 1961 AEGMVTVYGAWPTPRSPLLHFAPNATGELDQLLSGFEEFEASLGYKFRDRSYLLQAMTHA 2020
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSV 1235
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +V
Sbjct: 2021 SYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAV 2080
Query: 1236 KHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV--------------TSFPKA 1281
+HG HK H S L N +D F ++ + PKA
Sbjct: 2081 RHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDVEVPKA 2136
Query: 1282 LGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTEYCQK 1335
LGD+ ES+AGAIF+DS + +VV+Q + M++PE +F P+REL E +
Sbjct: 2137 LGDVFESIAGAIFLDSNMSLDVVWQ----VYSNMMSPEIEQFSNSVPKSPIRELLEL-EP 2191
Query: 1336 NHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
KP + VTV+V G TF + + + AK A K L+ L+
Sbjct: 2192 ETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2243
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 487 GSDTLCGLIYCNQNHTARVLFELLAEMSRRDPNLKFLRCQYTTDRVADPATEPKEAELEH 546
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TSILEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 547 RRQEEVLKRFRMHDCNVLIGTSILEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 606
Query: 495 DYLLMV 500
++++V
Sbjct: 607 YHVILV 612
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-EMGICTLY-----LPNNCPIQT 604
TG L S+++LI YC+RLPSD + K T + + E TLY LP N P++
Sbjct: 817 TGASVDLGSAIALINKYCARLPSDTFTKLTALWRCTRSERAGKTLYQYTLRLPINSPLKH 876
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 877 DIVGLPMPTQTLARRLAALQACAELHRIGELDDQLQP 913
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L +A ++NTI+ L S K IA+ LL+ + R V+V+L +V
Sbjct: 18 RDFQVELLASAFERNTIICLGHRSSKEFIALKLLQELSRRARCRGK-VSVYLSTQVGRNT 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ M H TDL+V + DM V F W + + V ++ P+ + L
Sbjct: 77 EPTSIYTMLSHLTDLRVWQEQPDMQVPF--DHCW----TDYNVSILRPEEFISLLEAREL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L+ +++++L++CH + Y I+ F +L + PRI G+ A P+ S
Sbjct: 131 LLSSVELIVLEDCHDS---EVYRRILPLFEDHILPAAHHDRPRILGL-AGPLHS 180
Score = 40.4 bits (93), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1719 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1775
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1776 LSHLRSKQVAN 1786
>gi|402079303|gb|EJT74568.1| dicer-like protein 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1607
Score = 192 bits (489), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 284/642 (44%), Gaps = 70/642 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK--------PSPFVAVFL 74
R YQ+E E A ++NTI L+TG+GKTLI+I+L+R +++ K FL
Sbjct: 174 REYQIELFERAKQKNTIAVLDTGTGKTLISILLIR---HIIEKELETRSQGKENRATFFL 230
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDG 133
V KV LV QQ + + + D + GD W D W++ S + V+V T +IL
Sbjct: 231 VDKVTLVWQQTKQLHSNLDFAITGIHGDSVTHLWNDIEYWQKLRSDNMVIVCTAEILYTC 290
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L Y + I +L+ DE HH + H YA I+ +FY + E PR+ GMTASP +
Sbjct: 291 LARGYINMRQINLLVFDEAHHTKKNHPYARIIKDFY--VTEEDPDARPRVLGMTASPFDT 348
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
K E+ +LE L++S++ T A + +L + A+ + Y +PH T L
Sbjct: 349 KTIHIEK----AASELERLLHSEIATIADDELLKAI--GNRAEERNVPYAFLPHREPTDL 402
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
+L + H+ + K ST SELG W A +
Sbjct: 403 CKKLETLLRSHS------------------QFKKAFSTAKIVASELGPWCADR------L 438
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWS-IGDDSKFN--LDSGLLTE 370
+E F L+G E+ ++ S+ + E + I +S D GL +
Sbjct: 439 WELKFQDDSGLEGRAESNSRRENSEWQMCETDQLGDLREAALIVKNSALGPPQDDGL-SS 497
Query: 371 KIVCLIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSE--LLPRHCTWKTKYI--AGN 425
K + L+E L E E +CI+FVER A++L L+ + R Y+ +G
Sbjct: 498 KTLKLLEILEENFCSETSTQCIVFVERRDVAVLLTDLVQNPAMSVRFPYLNAAYLIASGR 557
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
S KKQ V FR +N + ATSI EEGLD+ CNLVI FD +T +IQS
Sbjct: 558 GDSHTSISNKKQEATVWSFRLRELNCLFATSIAEEGLDIPGCNLVIRFDLHKTTIQYIQS 617
Query: 486 RGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--------EVLSHASLPCSPLN 537
RGRARM S ++ M + G+ + A MR+ +L
Sbjct: 618 RGRARMAGSVFIQMTEMGNQDHMRSWYQHQADERTMRQFCAALPEDRILQRIGADVDSAL 677
Query: 538 NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD-GYFKPTPKFHINKEMG--ICTL 594
+ G+ Y V TG T S++++ Y LP + P++ + +G +
Sbjct: 678 HGDQGQRVYVVPETGARLTYKHSLNVLAEYVGTLPVNVEGLSFGPEYTVIPVIGGFQGEV 737
Query: 595 YLPNNCPIQTVIAQGNIKTLKQAACLEA----CKKLHQIGAL 632
LP + P+++ A G+I+ K A A C L + G L
Sbjct: 738 LLPESSPLRS--ATGSIQRSKAVAKCSAAYAMCISLIEAGYL 777
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 217/493 (44%), Gaps = 90/493 (18%)
Query: 926 ELCRIIMAPISL-STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
E +I P+ + S Y+F P+I++RL++ L+A+N N+L ++I LEA
Sbjct: 1068 ETLQISRLPVEVVSMAYNF---PAIIYRLENNLIALNCCNLL------GLSIRPDLALEA 1118
Query: 985 ITTKKCQED--------------FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVK 1030
+T D + E LE LGD FLK A + LF T E V+
Sbjct: 1119 VTKDSDNSDEPDEAPVNFQGGMGKNYERLEFLGDCFLKMATTIALF-TLMAGDEFEYHVE 1177
Query: 1031 KERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG 1090
+ I N L + + L +IR++SF+ + W G +L G+++
Sbjct: 1178 RMTDICNKNLLNVALDMGLQKYIRSKSFNRRTWYPSGL----------TLLKGKRLEADA 1227
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGEN-------VGLIFLDRIG--------------IK 1129
+ K++ADV EALIGA TG E + L R +K
Sbjct: 1228 THSLGDKSIADVCEALIGAAYLTGRERNSFDMAVKAVTLLTRSQTHTMKSFAEYRAAYVK 1287
Query: 1130 VDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQ 1187
++ VP R +L R ++ + Y F+D LL A H SY + IP YQ
Sbjct: 1288 PEWQTVPASRL------QLELARRIKEKMGYEFKDARLLRSAFMHPSYPRVYENIP-SYQ 1340
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGDA+LD +L+ ++P P +LT+ + A V+N Y +V+ G H+H++
Sbjct: 1341 RLEFLGDALLDMTCIDHLFGRFPDRDPQWLTEHKMAMVSNQFYGCLAVELGFHRHVVCLK 1400
Query: 1248 HELYKRINITVDSF-------EKLSL-----GSTFG---WESVTSFPKALGDIIESLAGA 1292
+L +I VD E+ ++ + F W + PK L D++E+ GA
Sbjct: 1401 TQLQGQIADWVDRLGERRRRAEQAAVDAGRPAADFARNFWVDMEHPPKCLPDVLEAYVGA 1460
Query: 1293 IFVDSGCNREVV----FQSIRPLLEPMITPETMR-FHPVRELT-----EYCQKNHFSMKK 1342
+FVD+G + V + +RP M +T HPV L + +H + +
Sbjct: 1461 LFVDAGYDYGAVEAFWAEHVRPWFADMAAYDTYSAHHPVTHLNSILVHQLGCTHHRLLVR 1520
Query: 1343 PVASRISGKAAVT 1355
+A SG+A V
Sbjct: 1521 EIADTASGEAVVA 1533
>gi|350399948|ref|XP_003485689.1| PREDICTED: endoribonuclease Dicer-like [Bombus impatiens]
Length = 1490
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 286/617 (46%), Gaps = 61/617 (9%)
Query: 6 MESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
ME+D E + R YQ++ E A K+N I++L TG+GKT IA+ML++ + +R+
Sbjct: 1 METDIKEFI-------PRPYQIDLFETACKENVIIYLPTGAGKTFIAVMLIKELSADIRR 53
Query: 66 PSPFVA---VFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
P +F+V V LV QQ++ IK T L G + GVDFW W E +++HEV
Sbjct: 54 PYAEGGKHTIFIVNTVPLVIQQSDYIKRLTGLSCGTLSSEEGVDFWHDEEWNEHLNQHEV 113
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
LVMT QIL++ L Y LN I ++I DECH A H IM F + PR
Sbjct: 114 LVMTSQILVNALCHGYIFLNRINLIIFDECHRAVNDHPMRQIMQLFEN----CPKEEQPR 169
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTC--ASESVLSNFIPFSTAKFKFY 240
+ G++AS + S V + + LE N+++ T A +S ++ I +F +
Sbjct: 170 VLGLSASLLNSNVRLKKVQ--SVMQSLEVTFNARIATATVADKSYYASPIE-EIIQFDQH 226
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAEL----IRKKVSKINSTLLYCL 296
D++ + ++ E+ +I L +NL NE+ AE KK+S I + Y
Sbjct: 227 IIDDVGECI-NNIIKEVELI-LNCIALKDNLKYNESSAEFRPKTTSKKLSGILRNIQYHF 284
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV-------PS 349
G++ A K QL+ ++I + L+T V
Sbjct: 285 LRTGIYGASKCV---------LLHLIQLEYLKKSIDDVETLYILEYLITNVINCRKLLED 335
Query: 350 GAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSE 409
+ S + +N S + + + L + + CIIFV+R TA +L +L
Sbjct: 336 KMKGSPEKERIYNYSSDQIRKLLKALKDFYNNKHHDQVFCCIIFVQRRFTAKILYQILKS 395
Query: 410 LLPRHCTWK---TKYIAG-------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILE 459
+ +K +++ G N + C S + + E++ FR GL+N IVAT +++
Sbjct: 396 ISLHDEEYKFLHPEFVMGVSSNPFKNPKELLCVSERNK-EVLLRFRNGLLNCIVATDVID 454
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EG+DV C+L+I +D V ++IQS+GRAR S Y+++++ DS R Y
Sbjct: 455 EGIDVPKCSLIIRYDLPMDVRTYIQSKGRARHAYSRYVVLLQKDDSQYLRRHNEYKKIEQ 514
Query: 520 KMRKEVLSHASLPCSPLNNHMYGEDFYH-------VESTGTIATLSS--SVSLIYFYCSR 570
+++ ++ P N + E + H + G + ++ ++++I YC+
Sbjct: 515 HLKQLLVDKTDERNVPTENEIQSELYQHDIEPYQVISDDGQVCCITEQMAINVINQYCTS 574
Query: 571 LPSDGYFKPTPKFHINK 587
L + +P + ++K
Sbjct: 575 LLKSKFACLSPIWTLHK 591
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 194/415 (46%), Gaps = 74/415 (17%)
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
TK + F+LE LETLGD++LK+ S L+ + + EG L+ K +II N L G +
Sbjct: 1019 TKTGHDAFNLERLETLGDAYLKFITSLFLYNEFPKHSEGYLTALKGKIIGNRNLYYCGIK 1078
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELND-------------------DSLFNGR--- 1084
+ +PG ++ +SF P I + ++ D D +G
Sbjct: 1079 KNIPGCMKVDSFIPLSNFIAPAYTVYRQVQDVLLHAKVSPNVLYEIEIPRDEQLSGHISE 1138
Query: 1085 --------KI-------------YVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 1123
KI + G + V KTVAD VEALIG +L + G LI L
Sbjct: 1139 ATKNAIQTKILDWETAEAQTGMEHYLGIQTVSDKTVADCVEALIGVYLRSMGIKDTLILL 1198
Query: 1124 DRIGI---KVDFVNVPY-QRQFQVHAERLVN-----VRHLESLLNYSFRDPSLLVEALTH 1174
I K+D + + Q + +E +N ++E+ L Y F + L++A TH
Sbjct: 1199 QWFQILPYKIDANELLFGTPQNPIISEGNINHLMPWASNIETKLGYRFNNRGYLLQAFTH 1258
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDA+LD+LIT Y+Y L+PG LTD+RSA VNN +A +
Sbjct: 1259 PSYTPNNMTECYQRLEFLGDAILDFLITNYIYESCGNLNPGALTDLRSALVNNITFACLT 1318
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKL------SLGSTFGW----------ESVTSF 1278
V+HGLH +L + ++N ++ F K ++ W
Sbjct: 1319 VRHGLHIALLSYA----PKLNNIIERFVKFQEERNYAVNDELLWILLEEDECNMAEHVDV 1374
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTE 1331
PK LGDI ES+ GAI++DS N VV+ + ++ I + + P+R L E
Sbjct: 1375 PKVLGDIFESVIGAIYMDSNKNLTVVWNIVYSIMHKEIDEFSKNIPKQPIRVLYE 1429
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 1164 DPSLLVEALT---HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
DP + ALT H ++ L +RLE LGDA L ++ +++LYN++P S GYLT +
Sbjct: 1010 DPGQIAYALTKTGHDAFNL-------ERLETLGDAYLKFITSLFLYNEFPKHSEGYLTAL 1062
Query: 1221 RSASVNN 1227
+ + N
Sbjct: 1063 KGKIIGN 1069
>gi|296812107|ref|XP_002846391.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
gi|238841647|gb|EEQ31309.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
Length = 1437
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 203/723 (28%), Positives = 320/723 (44%), Gaps = 101/723 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQ+E LE +LKQN IV ++TGSGKT IAI+ +R L R P + FL PKV L
Sbjct: 57 SRAYQVEMLEESLKQNIIVAMDTGSGKTQIAILRIRHE--LERCPIHKIVWFLAPKVPLA 114
Query: 82 PQQAEAI-KMHTDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ AI K + G ++ W W + ++V TPQ+LLD L +
Sbjct: 115 EQQYLAISKQLPAYQTRILTGADNLERWSTQKIWDAFLLNTRIVVSTPQVLLDALSNGFI 174
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYH----RLLETGDSNLPRIFGMTASPIKSKV 195
L I +L+ DE HH IM FYH +L +T D LP I G+TASP
Sbjct: 175 TLRRIALLVFDEAHHCVKSAPENRIMQNFYHAQVHQLRKTND--LPYILGLTASP----T 228
Query: 196 SSSEQDYWQK-------------IHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY 242
SSS +D ++ IH E + + S + + + + KF+
Sbjct: 229 SSSAEDALRQLELNLHACCKTPNIHREEMMQFVHIPELRKVSYQKDLMLLNNLEVKFFA- 287
Query: 243 DEIPHALYTHLADELAMIELKHTRSLE---NLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
+ +++ + KH R + L L LI+ K + S ++Y SEL
Sbjct: 288 --MLNSIDIQDDPFFQRYKGKHDRKSQERYTLALERKTPCLIQLK--RCFSKIVYMFSEL 343
Query: 300 GVWLALKAAETISCYESDFFA------WEQLDGFGETIIKKFGSDASQALVTYVPSGAE- 352
G+W A I D A W + D K S A++ + E
Sbjct: 344 GLWAASTYISEIYRRAHDKKAKLIDQNWSEWD-------KDDASFICNAMLPVIEIMGER 396
Query: 353 -WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL 411
W DS +++K+ LI LL R IIFVE+ TA++L L+S+
Sbjct: 397 HWDTAPDS--------VSQKVDHLIH-LLSSEHTGTSRGIIFVEQRATAVMLTHLISQH- 446
Query: 412 PRHCTWKTKYIAGNNSGIQCQSRKKQ-------NEIVEEFRRGLVNVIVATSILEEGLDV 464
P+ K+ Y GN++ +S + + + + + G N++VATS+LEEG+DV
Sbjct: 447 PKLTHIKSDYFLGNSAFAARKSDITELSKPGDMKDSINDLKSGKKNLLVATSVLEEGIDV 506
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
+C+LV+ FDP + + SF+Q RGRAR NS Y++ D++T+ +++ A + M++
Sbjct: 507 SACDLVVCFDPPKQLRSFVQRRGRARKANSKYVIFHAEDDTSTK---KDWEAMEDIMKER 563
Query: 525 VLSHASLPCSPLNNHMYGED-----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
++ L L ED +ESTG + TL ++ + +CS LP D +
Sbjct: 564 YSNNKELIDEYLAQESDDEDENDYENLRIESTGALLTLDNARQHLSHFCSTLPCD-FTDI 622
Query: 580 TPKFHINKE----MGICTLYLPNNCPIQTVIAQG-----NIKTLKQAACLEACKKLHQIG 630
P F I+K M + LP Q +G K K+ A +A +L+++
Sbjct: 623 QPDFIISKAVAGTMFTAKVLLPTALDPQFREFEGIRTWKKEKMAKRDAAFQAYLQLYEVS 682
Query: 631 ALTDNLLPD---------IVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHC 681
+ ++L+P+ +EKH + +E ++ P E + Q T Y
Sbjct: 683 LVNEHLMPEHCHTTDEETAHIEKHPSTATCSEAFS-------PWETIADQWQATDTFYQS 735
Query: 682 YLI 684
++
Sbjct: 736 SIV 738
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 198/421 (47%), Gaps = 65/421 (15%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVL 982
P I M P+ S F F+PS++H + LLA L +L +++ + VL
Sbjct: 934 PVRDSSISMLPVGFSKFA--LFIPSLIHTVGRFLLAEELSKTILSPIGFKDIQL----VL 987
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + LE LGDS LK S QL + HEGLLS KK IISN+ L K
Sbjct: 988 TAISASSARESTNYQRLEFLGDSALKLHTSMQLLVDHPFWHEGLLSHKKGFIISNSRLWK 1047
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI T F W P NS +Y N ++ +++ +KT+ADV
Sbjct: 1048 ATIETGLDRFILTACFTGAKW-RPLYNS-TYTA------NAGRVGKNSTREISTKTLADV 1099
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ----FQVHAERLVNVRH----- 1153
VEALIGA + GGE+ L L ++++++ Y+++ + E N H
Sbjct: 1100 VEALIGAAIVDGGEDKALHCLQVFLPEINWLS--YEKRIEMLYDASPEFHDNAPHDILSK 1157
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E L++YSF +LL +L+H S P YQRLEFLGD++LD ++T L+ +
Sbjct: 1158 IEPLIDYSFTKKALLATSLSHPSN--PISGMTYQRLEFLGDSILDSIVTRALFRSNKEIP 1215
Query: 1214 PGYLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHILH-A 1246
+ MR+A VN D A S+ + L +++ H A
Sbjct: 1216 HQDMHLMRTALVNADYLAFLCMNTSTDEQREDVSASSIGKVEITSSTRRVSLWQYMSHSA 1275
Query: 1247 SHELYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVD 1296
+ ++ TV FE+ L G+ + W + + PK DIIES+ GAIF+D
Sbjct: 1276 ALDIANAQLATVRKFEELREKIDEALRSGTRYPWTLLLTLNAPKFFSDIIESILGAIFID 1335
Query: 1297 S 1297
S
Sbjct: 1336 S 1336
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
F+D L++ A++ S YQRLEFLGD+ L ++ L +P G L+ +
Sbjct: 980 FKDIQLVLTAISASS---ARESTNYQRLEFLGDSALKLHTSMQLLVDHPFWHEGLLSHKK 1036
Query: 1222 SASVNNDCYALSSVKHGLHKHILHA--SHELYKRINITVDSFEKLSLGSTFGWESVTSFP 1279
++N ++++ GL + IL A + ++ + + + +G E T
Sbjct: 1037 GFIISNSRLWKATIETGLDRFILTACFTGAKWRPLYNSTYTANAGRVGKNSTREIST--- 1093
Query: 1280 KALGDIIESLAGAIFVDSGCNR 1301
K L D++E+L GA VD G ++
Sbjct: 1094 KTLADVVEALIGAAIVDGGEDK 1115
>gi|403419584|emb|CCM06284.1| predicted protein [Fibroporia radiculosa]
Length = 1482
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 201/699 (28%), Positives = 309/699 (44%), Gaps = 109/699 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAI--MLLRSYAYLLRKPSPFVAVFLVPKVVL 80
R YQ E L+ +L+ N ++ L+TGSGKT IA+ M L S L + V+ FL P V L
Sbjct: 18 RGYQQEMLDESLRMNLVIALDTGSGKTHIAVLRMKLESERELSK-----VSWFLAPTVAL 72
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
V QQ+E IK + V G W D W+ + H V+V TPQILLD L Y
Sbjct: 73 VEQQSEVIKSAIPVSVTAISGASEPKQWIDPKLWRSVLDTHRVIVSTPQILLDALHHGYI 132
Query: 140 KLNM-IKVLILDECHHARGKHQYACIMTEFYHRL------LETGDSNLPRIFGMTASPI- 191
L I +LI DE HHA KH Y IM FY L + T P + G+TASPI
Sbjct: 133 DLGRDIGLLIFDEAHHAMSKHPYNMIMQNFYFSLPPRSECVNTNGRMRPMVLGLTASPIY 192
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTC-ASESVLSNFIPFSTAKFKFYK-----YDEI 245
V +S H LE ++S + + L+ ++ K FY DEI
Sbjct: 193 GGNVDAS-------FHALERNLDSTIRSSRMHREELAQYVHRPVFKHIFYDCPPYLEDEI 245
Query: 246 PHALYTHLADELAMIELK---HTRSLENLDLNEAQAELIRKKVSKINSTL----LYCLSE 298
P A Y L + +++++ + +SL N + R+ +++ T+ +C
Sbjct: 246 PSANYQALQSVVDLMKIEDDPYVKSLRNQLKRANPGDEWRRIDQQLSKTIRKEDTFC--H 303
Query: 299 LGVWLALKAAETISC----YESDFFAWEQLDGFGET------IIKKFGSDASQALVTYVP 348
G+ +AA+ I + +D++ E ++ I+ +G+ + L+ +
Sbjct: 304 KGLRDFARAAQDIGLELGPWAADWYVLEVIEQAQRAADPYNNIMASWGNTEKRYLLDTLA 363
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIV---CLIESLLEYRGV-EDIRCIIFVERVITAIVLQ 404
+ D L SGL ++ CL+ E+R E ++FV R T + L
Sbjct: 364 KVKPIKVPFDEN-ALFSGLSSKVWTLANCLVAEEKEFRSQNESYSGLVFVTRRDTVLALA 422
Query: 405 SLLSELLPRHCTWKTKYIAGNNSGIQCQ-----SRK----KQNEIVEEFRRGLVNVIVAT 455
+L L ++ + G++S +R+ + + EFR G N+I++T
Sbjct: 423 EVLRRLPQTGQLFRIGCLVGSSSSFSRHAFLDITRQLVIDSHLDTLAEFRSGEKNLIIST 482
Query: 456 SILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL 515
S+ EEG+D+Q+C VI FD S+ QSRGRAR S ++LM ++G Q ++E +
Sbjct: 483 SVAEEGIDIQACGSVIRFDLPPNTVSWAQSRGRARKSRSSFVLMFENGAEQRQ-KVEEWE 541
Query: 516 ASGNKMRKEVLSHASLPCSPLNNHMYGEDF-----------YHVESTGTIATLSSSVSLI 564
+ KM +L P N + G F Y V STG I TL S+ S +
Sbjct: 542 QTEYKM-------MTLYNDP--NRISGAVFEEDDDEEVDLQYVVPSTGAILTLHSATSHL 592
Query: 565 YFYCSRLPSDGY------FKPTPKF------HINKEMGI--------CTLYLPNNCP--I 602
+C+ LP+ Y P P F ++E GI T+ LP P +
Sbjct: 593 NHFCAVLPNSAYQYAAYDLDP-PDFPEDWHSKQDEEKGIPVYQGPWGATITLPRALPKHL 651
Query: 603 QTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
+T +T + A +A +LH+ G L D+LLP
Sbjct: 652 RTFTTPREHRTKRSAQRHVAFQAYVELHKAGLLNDHLLP 690
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 241/533 (45%), Gaps = 79/533 (14%)
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIM 950
PLL + N+L + P++ S L P L + + +S Y ++PS++
Sbjct: 920 PLLEVQAFPQRANFLIPLAAPSEGLPNEESIFLLPSLATVEL--VSNQDVYFAMYLPSVL 977
Query: 951 HRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYA 1010
L ++L V+L+ LL + P + A+T QE + + LETLGD+ LKY
Sbjct: 978 RALANVLTVVSLRETLLAGSPVS-QAPFSLLTTAVTAPVSQELSNYQRLETLGDTVLKYV 1036
Query: 1011 ASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS 1070
+ QLF + HEG L+ +K+ +SN L K ++L +I + F P+ W
Sbjct: 1037 TTIQLFADHPLWHEGYLARRKDHAVSNIQLAKQAISKRLYQWIIRDRFVPRKW------- 1089
Query: 1071 GSYELNDDSLFN---GRKIYVTGRKK----VKSKTVADVVEALIGAFLSTGGENVGLIFL 1123
+ + D + N I + +KK + +K +ADVVE+LIGA GG ++ +
Sbjct: 1090 RPHYITDVDVQNVSTEETIPLDDKKKKTQALSTKVLADVVESLIGAAYEHGGFDLAVDCT 1149
Query: 1124 DRIGIKVDFVNVPYQRQFQVHAERLVNVRH-----------LESLLNYSFRDPSLLVEAL 1172
G+ + + +P VH E ++ + +E ++ Y F +LLV+AL
Sbjct: 1150 SIFGMGLTWKKIP------VHIENILAITEELENPPPQLALVERMIGYQFSRKALLVQAL 1203
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LSPGYLTDMRSASVNNDCY 1230
TH SY Y+RLEFLGD+ LD ++T +LY+ PG PG++ + A VN+
Sbjct: 1204 THASYHGDTASMSYERLEFLGDSALDMIVTDFLYHA-PGKNYKPGHMHIRKEALVNSHFL 1262
Query: 1231 A---------LSSVKHG-----------------LHKHILHASHELYKRINITVDSFEK- 1263
A + + H L++ +LH+SH + N+ +++
Sbjct: 1263 AFICLRTHTDVDGISHRWTPAEGVTTTPDRQTIHLYQCLLHSSHRVLDDQNVAFGRYKRG 1322
Query: 1264 -------LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCNREVVFQSIRPL--- 1311
L + + W ++TS PK + D++ESL GA+FVD+ + V +R L
Sbjct: 1323 GQDIQDALDRDAIYPWAALTSLQSPKFVSDMVESLLGAVFVDAAGDLGAVRGVLRTLGVV 1382
Query: 1312 --LEPMITPETMRFHPVRELTEYCQKNHFSMKKPV-ASRISGKAAVTVEVQAN 1361
+E ++ + HP+ LT + K K + +R G + V V +
Sbjct: 1383 GIMERIVADDVDVQHPISRLTIWADKQEPKRKAKLEVTRADGNVSCAVLVDGS 1435
>gi|393246694|gb|EJD54202.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1453
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 195/688 (28%), Positives = 307/688 (44%), Gaps = 95/688 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR----SYAYLLRKPSPFVAVFLVPKV 78
R YQ E L +LK+N I+ LETGSGKT IA++ LR A L + + FLVP V
Sbjct: 11 RKYQEEMLNESLKRNIIIVLETGSGKTHIAVLRLRLEVERQAALGTNKASW---FLVPTV 67
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLS 137
L QQ ++ VG G + D W A+ WK+ +S ++V+V TPQ+LLD LR +
Sbjct: 68 ALCQQQHRVLERELPCSVGLISGALQPDKWTSASVWKQVVSVNQVVVSTPQVLLDALRHA 127
Query: 138 YFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
Y L + +LI DE HHA H Y IM EFY L + P I G+TASP+ V
Sbjct: 128 YLDLGRDVGLLIFDEAHHALRGHPYNRIMREFYDPL---QPDDKPFIMGLTASPL--NVD 182
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY---DEIPHALYT-- 251
+ EQ+ L+ + T +E L + T K Y + E P +L +
Sbjct: 183 TLEQN----------LLCRALTTRENEEELRAHVFPPTLKHVIYDHRPRHEQPESLQSLS 232
Query: 252 ------HLADELAMIELKHTRSLEN---LDL--NEAQAELIRKKVSKINSTLLYCLSELG 300
+ D+ ++ L+H + +D E Q + K V K N+ L +L
Sbjct: 233 TVYEDLDIEDDPSVRHLRHALQTPHDGPVDAVERERQEARLAKAVRKRNTVTHETLKKL- 291
Query: 301 VWLALKAAETISCYESDFFAWEQLDGFGETIIKK-----FGSDASQALVTYVPS--GAEW 353
+ AL + + +D+F + +D I F S + Y+ G+
Sbjct: 292 LKSALDTFYELGPWAADWFVADSVDKLRRPIDASQEFSFFNSKRTTEETRYLRDILGSVR 351
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLL-EYRGVE---DIRC-IIFVERVITAIVLQSLLS 408
+ ++ + + L++ L+ E R E DI IIFV +++L ++S
Sbjct: 352 VARPSLEPDVVAAGTAPQTQALVDLLVDEKRAAEASGDIYSGIIFVTLRTASLLLSKVIS 411
Query: 409 ELLPRHCTWKTKYIAGNNSGIQCQ---------SRKKQNEIVEEFRRGLVNVIVATSILE 459
+ Y+ G ++ + + + K Q E +++F G +N+++ATS+LE
Sbjct: 412 AHPKTRDAFHVGYLVGWSNDERRRNVLDLLVGGNDKAQEETLKDFAEGRLNLLIATSVLE 471
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGN 519
EGLDV CN VI F+P+ + S++QSRGRAR + S +++M S Q ++ + A
Sbjct: 472 EGLDVARCNCVIRFNPANNITSWVQSRGRARRERSSFVVMF-SDIQDGQEQMLRWTALER 530
Query: 520 KMR---KEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY 576
+M KE + ++ H + ++ VE TG + TL ++ + I +C +LP Y
Sbjct: 531 EMNAKYKEAMRERAVGAPQREEHQH---YFKVEETGALLTLDNATAHISHFCDKLPHSAY 587
Query: 577 FKPTPKFHINKEMGI---------------------CTLYLPNNCPIQ-----TVIAQGN 610
+ P + I G CTL LPN T + +
Sbjct: 588 ARMVPIYDIFPPDGFMEPLAPGQALPALKEESKLFGCTLTLPNVVSPALRKHVTPMVHPS 647
Query: 611 IKTLKQAACLEACKKLHQIGALTDNLLP 638
K K+ EA +KL G + NLLP
Sbjct: 648 EKAAKRQVAFEAYQKLFNAGLVNPNLLP 675
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 218/489 (44%), Gaps = 90/489 (18%)
Query: 925 PELCRI-IMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE 983
P+ CR+ I+AP + F+PSI+ +QS +L +L L + +V +P + V
Sbjct: 922 PQFCRVDILAP---AMARLSMFLPSILRDMQSAILGRDLHRHLFTTGLLSV-VPLLDVRT 977
Query: 984 AITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKL 1043
AITT + ++ + +ETLGD LK+ S QL + HEG L++KK+ I+SN+ L +
Sbjct: 978 AITTPLTGDAYNYQRVETLGDCVLKFLTSVQLLDMHPEWHEGYLTMKKDHIVSNSNLARE 1037
Query: 1044 GCEQKLPGFIRTESFDPKMW------IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSK 1097
KL +I + K W +P + +D + V ++ +K
Sbjct: 1038 AKRNKLALWIIRDRMVAKKWQPQYLTALPDTSMDVDPPTEDPPAKEKDENV---PRLSTK 1094
Query: 1098 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER---LVN---- 1150
+ADVVE+LIG GG + + L R+GI + +++ A+R +VN
Sbjct: 1095 VLADVVESLIGVAHENGGYDAAVDMLRRLGIGQSM-----ELEWKTVADRVHSIVNRIEP 1149
Query: 1151 ---------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 1201
VR LE +L + F PSLL EALTH +Y Y+RLEFLGD++LD ++
Sbjct: 1150 LPHGYPEDYVRTLEQMLGHRFEHPSLLFEALTHANYTGDVHTVSYERLEFLGDSLLDNVV 1209
Query: 1202 TVYLYNKYPGLSPGYLTDMRSASVNND-----CYALSSVKH------------------- 1237
T +Y+ L P +T R A+VN + C LS+ +
Sbjct: 1210 TEQVYHSPRRLPPVLMTRCRIATVNTEMLAYCCANLSTEQQHMTVQRAPDRPEGATFVPT 1269
Query: 1238 ------------------GLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSF- 1278
G+ + + +++RI E+ + G F W +
Sbjct: 1270 SRTVRLPTFIRMSNVAMVGVVRDYIAGYERVHERIA------ERFAHGREFPWTDLFELR 1323
Query: 1279 -PKALGDIIESLAGAIFVD-----SGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
PK LGDI+ESL AI++D + R + I P+L +I HP+ L EY
Sbjct: 1324 APKFLGDIVESLIAAIYLDTRGSMAAVERFIERLGILPVLRHLIDDRVDVRHPLTVLGEY 1383
Query: 1333 CQKNHFSMK 1341
K+ +K
Sbjct: 1384 AAKSQGKLK 1392
>gi|310794641|gb|EFQ30102.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1447
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 186/660 (28%), Positives = 303/660 (45%), Gaps = 73/660 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ E + +++QN IV ++TGSGKT +A++ +R A + R S + FL P V L
Sbjct: 65 ARAYQTEMFDQSMRQNIIVAMDTGSGKTQVAVLRIR--AEVERTSSKHIVWFLAPTVSLC 122
Query: 82 PQQAEAIKMHT-DLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ ++ ++++ GD VD W D TW E + ++V T QILLD L ++
Sbjct: 123 AQQFAVLQSQIPEVQIKFLSGDDNVDSWSDQRTWDEVLHNVRIVVSTYQILLDALSHAFV 182
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-LPRIFGMTASP-IKSKVSS 197
++ + +++ DE H+ GK + IMT FYH E G P I G+TASP SKV
Sbjct: 183 RMERLSLIVFDEAHNCIGKSPGSKIMTVFYHE--EKGKGRYTPHILGLTASPTFGSKV-- 238
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
+ I+ LE +++ C S +V + + K PH Y
Sbjct: 239 ------EGINALEATLDA---VCKSPTVHRSDLLACVKKPTMTYISFQPHRCYDPPGSLQ 289
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL----------ALKA 307
++ K RSL+ LD + L + + L+ L W+ A +
Sbjct: 290 SL--RKAIRSLDILD-DPHILHLQSEGTERSQRALMVALESHDTWIQNQMTSFGRQANQI 346
Query: 308 AETISCYESDFFAWEQLDGF-----GETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
+ + ++++ W F ++I D + + + + E +
Sbjct: 347 FNDLGPWAAEYYIWVVKSRFMAALRSQSISLNTWKDDEKEYLAKILNQVECQCPPEETIG 406
Query: 363 LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
D +L+EK+ LIE LL+ + DI ++FV T S+L LL H + +Y
Sbjct: 407 GD--VLSEKVFLLIEQLLQDK--TDIMGVVFVRERATV----SVLCHLLASHKLLRARYR 458
Query: 423 AGNNSGI-QCQSRKKQN---------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
G G Q Q+RK+ + + +FR G N+++ATS+LEEG+DV +CN+VI
Sbjct: 459 MGAMVGTSQFQARKRDIWDLSRSEDLQSLHQFRNGKTNLLIATSVLEEGIDVPACNVVIC 518
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ--SRLENYLASGNKMRKEVLSHAS 530
FD + SFIQ RGRARM++S L++ S +S + + LE + S + ++ L H
Sbjct: 519 FDYPPNLKSFIQRRGRARMKDSKLLMLHDSSESAPKEWAALEAEMKSQYEEKERELEHLK 578
Query: 531 LPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
+ E + + TG + ++ + C R+ S G F +I K++G
Sbjct: 579 ---EVEDTEESTEMIFVINQTGAVLDPENAKQHLDHLC-RILSPGEFIDWRPDYIIKKLG 634
Query: 591 I-------CTLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
T+ LP+ P ++T +Q K+ K A A +A L++ G + DNLLP
Sbjct: 635 AVDAPDIRATVVLPSYLPSHVRTAESQMAWKSEKNATKDAAFQAYVGLYKAGLVNDNLLP 694
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 215/494 (43%), Gaps = 90/494 (18%)
Query: 903 NYLSKCRQQKQKEPSK---ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLA 959
++L + + + + PS S P ++ P + F +PSI+H +++ L+A
Sbjct: 899 DFLHRPQSEPGQSPSSSKPYSRVYPMPWAKVDTIPAKYAQF--GVLIPSILHHIETRLVA 956
Query: 960 VNLK-NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKT 1018
L +L + ++++ +L AI+T E + E +E LGDS LK++A+ +
Sbjct: 957 RELSLGLLRPLAISDLSL----ILTAISTGSASEPTNYERIEFLGDSILKFSATINVAAL 1012
Query: 1019 YQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDD 1078
E LLS K+ I+SN+ LCK + L +I T+ F + W
Sbjct: 1013 NPQWPERLLSFHKDAIVSNSTLCKAAVKHGLDRYILTKPFTGQKW--------------- 1057
Query: 1079 SLFNGRKIYV---------TGRKKVKSKTVADVVEALIGAFLSTGGENVGL----IFLDR 1125
R IYV +K+ +KT+AD+VEALIGA + GG + L IFL +
Sbjct: 1058 -----RPIYVDSVLSRGEDKSMRKMSTKTLADIVEALIGASMIDGGLDKALKCMSIFLQQ 1112
Query: 1126 IGIK-VDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 1184
I + +D + E + LE L+ Y F +LL++A+TH S+ L
Sbjct: 1113 INWRTLDACRLALYNFSPPDVELPSTLEPLEHLIGYKFDRKTLLIQAMTHASFNLGNPFG 1172
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHG------ 1238
C +RLEF+GD+VLDY++ L+ P L + +++A VN D S++
Sbjct: 1173 CLERLEFMGDSVLDYVVVNRLFAVEPPLPHQTMHLLKTAMVNGDFLGFLSLEQSIGQDEV 1232
Query: 1239 --------------------LHKHILHASHEL-YKRINI----------TVDSFEKLSLG 1267
L K + H S + ++IN+ +DS E+ G
Sbjct: 1233 VLGENTGKEPNLQHSRFSLPLWKFMRHQSPAIGLEQINVHKRYTALRDQIIDSMER---G 1289
Query: 1268 STFGWE--SVTSFPKALGDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITPETM 1321
T+ W + K DI ESL GA++VDSG C R V I L+ ++
Sbjct: 1290 KTYPWALLARIQLRKFYSDIFESLLGAVYVDSGDLGVCARVVERFGITGYLDRILRDGVH 1349
Query: 1322 RFHPVRELTEYCQK 1335
HP EL K
Sbjct: 1350 VLHPKEELGHLADK 1363
>gi|339239929|ref|XP_003375890.1| putative RNase3 domain protein [Trichinella spiralis]
gi|316975421|gb|EFV58865.1| putative RNase3 domain protein [Trichinella spiralis]
Length = 1903
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 225/502 (44%), Gaps = 99/502 (19%)
Query: 980 KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+VL AIT E F+LE LE LGDSFLKY + +K Y HEG LS+ + R+ISN
Sbjct: 1402 EVLHAITASAVAETFNLEGLEILGDSFLKYVTTVYCYKAYSKMHEGKLSLLRSRMISNYN 1461
Query: 1040 LCKLGCEQKLPGFIRTESFDPK-MWIIP---------GDNSGSYE--------LNDDSLF 1081
L KLG + +P ++ FDP W+ P D + E +ND+S+
Sbjct: 1462 LYKLGKRKNIPQYMIAIKFDPSDTWLPPCYVPLNCEVQDTAIEEEDKLMEQRLMNDESVV 1521
Query: 1082 -NGRKIYVTGRKK---------------------------VKSKTVADVVEALIGAFLST 1113
R + TGR+ + K VAD VEALIGA+L
Sbjct: 1522 EQQRNVETTGRQATTGSKSTKWVPEDLSQLVPFNLLAQQGISDKGVADCVEALIGAYLLF 1581
Query: 1114 GGENVGLIFLDRIGIKVD-------------------FVNVPYQRQFQVHAERLVN---- 1150
G L FL +G+KV+ F N + V L+N
Sbjct: 1582 CGTRRTLDFLHWLGLKVEDEVSLRGFSRCIVSPTPISFANFDL---YGVTKSALINNSAD 1638
Query: 1151 -------------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
+ E ++ Y F+D SLLV+ALTH +Y E+ CYQRLEFLGDAVL
Sbjct: 1639 SEACLKTLWNRFSLSQFEDIIGYRFKDRSLLVQALTHSTYFYNEVTDCYQRLEFLGDAVL 1698
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSA-SVNNDCYALSSVKHGLHK--HILHASHELYKRI 1254
D+LIT +LY SPG LTD+RSA C L + K +I+ + + +
Sbjct: 1699 DHLITRHLYEDKRMHSPGMLTDLRSALYFMYLCPGLMMMIEKFVKTLNIIKENANFDREV 1758
Query: 1255 NITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
+ + + L E PKALGDI ES+AGAI++DSGC+ V+ +L
Sbjct: 1759 RVHLLNLYLLEGEEENA-EEQVEVPKALGDIFESVAGAIYLDSGCSLHTVWCIYYNMLRE 1817
Query: 1315 MITPETMR--FHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDA 1372
I + P+R+L E + + + + + GK V V V+ GR F+ A
Sbjct: 1818 EIEKCCLNPPISPIRDLLEL-EPDRVKFSRVERNAVEGKVKVAVTVEGKGR-----FVGA 1871
Query: 1373 DK--KTAKKVACKEVLKSLRAS 1392
+ + AK A K L+ L+ S
Sbjct: 1872 GRSYRIAKSTAAKRALRYLKGS 1893
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 151/650 (23%), Positives = 279/650 (42%), Gaps = 65/650 (10%)
Query: 37 NTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVVLVPQQAEAIKMHTD 93
N I L + + +++ML+R ++ +LRKP + V+LV + + A+ I+++T+
Sbjct: 29 NLIAPLGSAVDRLYVSVMLIREFSSMLRKPCSKNRRWCVYLVDRATSIKSVADRIRIYTN 88
Query: 94 LKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECH 153
L VG+ + D+ ++ +M +E+ V T + L LS+ N ++I ++CH
Sbjct: 89 LNVGEIFCDIHLESEAKQYCAAQMEGNEIFVTTGTHFMKLLDLSFIPRNCYCLVIFEDCH 148
Query: 154 HARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLM 213
A H Y I+ EF L PR+ G+T S I +V Y I ++ ++
Sbjct: 149 LAIRSHPYRNIVKEF----LNIEKEYRPRLLGLTMSLINDEVKGDCLQY--GIDTMQEVL 202
Query: 214 NSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDL 273
SKV S F+ T K Y + + + + + T LEN+ L
Sbjct: 203 CSKV-VLTMLSPAKKFLKRDT-KVVLISYPSTSLFSWDMFDNYILHLLVSPTFILENITL 260
Query: 274 NEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIK 333
+ + V + + + + E+G W A K C + + ++ ++
Sbjct: 261 PNDDDMICMQHVIESLNKVKWIHDEMGPWCAWKV-----CQKQEM-QLNRMKRIKPGTMQ 314
Query: 334 KFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL--EYRGV------ 385
+ Q + + E + + F+ +T + IE L + R V
Sbjct: 315 YLLIEMGQTYLRCLRKVFENHVKNLKNFSSLCAYITGHVYSFIELLSHNKMRSVFADDEN 374
Query: 386 --EDIRCIIFVERVITAIVLQSLL---SELLPRHCTW-KTKYIAGNNSGIQCQSRK---- 435
E+ CI+F + A V + LL L P + K ++ G +S S++
Sbjct: 375 FPENFCCIVFFKHRYIAYVYKILLKTLQNLWPDMFGYLKVDFLVGYDSETADASKEALHE 434
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
+Q+E++++FR +N+++ T +L +G++++ N VI +D ++ SFI + RA NS
Sbjct: 435 RQHEVLKKFRTKELNLLLTTRVLAKGIELRGANCVIHYDEPESLRSFIYVKNRANKPNSH 494
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRK---------------EVLSHASLPCSPLNNHM 540
Y +++ S + + N +K+ + + L P P +
Sbjct: 495 YFILLSECTSALSASVINTFVDIDKIIRNYSLLDYEDDNLELPDDLDDTFKPYYPKKSEE 554
Query: 541 YGEDFYHVE---STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM-GIC---- 592
G+D + + ATL++S+ ++ YC RLP D + + H+ K M G C
Sbjct: 555 VGDDDEEADKLKNNNVCATLANSIRIVNHYCQRLPCDIFSRLVADCHVEKVMSGECAPSP 614
Query: 593 ----TLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
TL LP N P TV ++ +++ LE K LH+ G L D+L+P
Sbjct: 615 KYRATLKLPINSPGPTV---DSVMLARRSVALETVKLLHRRGELYDSLMP 661
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE--------- 922
++K ++ ++YG+++ D +PLLN N L R+Q ++E + ++
Sbjct: 929 SFKSYFWQKYGLEIYHDDQPLLNVDYTASRLNRLFP-RRQARRESLEADYDTMSVVAQKQ 987
Query: 923 -LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDH 969
L PEL I PI ST+ ++PSI++RL SLLLA L+ +LLD
Sbjct: 988 KLVPELVDI--HPIPASTWRCLQYLPSILYRLSSLLLANELRLQVLLDE 1034
>gi|403418950|emb|CCM05650.1| predicted protein [Fibroporia radiculosa]
Length = 1373
Score = 189 bits (481), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 229/501 (45%), Gaps = 72/501 (14%)
Query: 888 DREPLLNGRRIFHVQNYLSKCRQ---QKQKEPSKISFELPPELCRIIMAPISLSTFYSFT 944
+++PLL NYL+ + Q K P K L PELC P S TF +
Sbjct: 788 EKQPLLEVAVAPPAINYLNPVLRPLLQSSKAPPKY---LIPELCAKFTIPAS--TFRTML 842
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
VPSI+HR+ LL L H TI ++ A+T F E LE GD
Sbjct: 843 LVPSILHRIDHQLLVKELNAHFFQH-----TILEEHLIAALTPPSASVAFDYERLELFGD 897
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
+FLKY AS F T + EG L + +++IISN AL LP +I+++ F K W
Sbjct: 898 AFLKYVASIYCFVTTPHVREGALHMARQKIISNKALLTGANRIGLPPYIQSKPFVAKTWT 957
Query: 1065 I---------PGDNSGSYELNDDSLFNGRKIYVTGRKKVK-------------SKTVADV 1102
P ++ + ND + I T ++ K KTVADV
Sbjct: 958 PITSPHSSRDPINDQKAVHYNDAVAGDTSAIQTTSKRSKKQKQQDEQNIQWLGDKTVADV 1017
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVN------------ 1150
VEA+IGA +GG+ + L + KV VN+P Q+ + +
Sbjct: 1018 VEAIIGAAYLSGGQRIALQTM-----KVLSVNIPGVEQWSDFSRLFTSQTSPSTVPLPTA 1072
Query: 1151 -VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
VR +E+++ F P LL +ALTH S + R Y RLEF+GDAVLD+L+ ++Y++
Sbjct: 1073 TVRAVETIVGNVFARPQLLAQALTHTSIGAHD-DRTYDRLEFVGDAVLDFLVVQFIYDRN 1131
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL----- 1264
PGLSP LT ++SA V+N A V GLH H+ HA+ E+ + + V ++
Sbjct: 1132 PGLSPNGLTLLKSAMVSNHALAAFCVHSGLHIHLRHAAPEVGTAVQVYVRKLGEVREKEY 1191
Query: 1265 -------SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRPLLE 1313
L + W ++ PK L D++ES+ GA+++ R +I+P E
Sbjct: 1192 RLAQSERRLPGQY-WLALDP-PKTLSDVVESVIGALYISDDFQETSVRAFFDGTIKPFYE 1249
Query: 1314 PMITPETMRFHPVRELTEYCQ 1334
I +++ HP L E Q
Sbjct: 1250 YHIRLQSLCPHPTTTLFELLQ 1270
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 130/320 (40%), Gaps = 41/320 (12%)
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
FN+ L K+V LIE+ R ++ V+R I A ++ LL EL
Sbjct: 234 FNVSPKFL--KLVELIET--NTSPTNSFRVLVLVKRKIVASMIVELLRELA------AFN 283
Query: 421 YIAGNNSGIQCQSRKKQNEIV-EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
+ Q++ E+ ++F RG N+++ T E + C++VI FD +
Sbjct: 284 RVRNVRPEAMTQAQYMDQELTFDKFVRGDTNILLITKS-SEHMTFPKCDIVIRFDLFESQ 342
Query: 480 CSFIQSRGRARMQNSD-YLL-MVKSGDSTTQSRLENYLASGNKMRKEVL-----SHASLP 532
S+ S A NSD YL+ MV+ G++ + L + A + ++ + S ++P
Sbjct: 343 LSYAASV--AHCSNSDGYLVHMVERGNAGHRRVLADITALSDDFQRWLPRLKPGSTGAIP 400
Query: 533 CSPLNNHM--YGEDFYHVE--------STGTIATLSSSVSLIYFYCSRLPSD-GYFKPTP 581
L+ + Y D E +TG I S ++++I+ + L D F P
Sbjct: 401 PRSLHETLDPYWSDSDDDEPSPLIRDPTTGGIVKCSDAITVIHRLAASLQDDHNGFTIEP 460
Query: 582 KFH---INKEMGICTLYLPNNCPIQTVIAQGNIKTLK----QAACLEACKKLHQIGALTD 634
F + M T+ LP I+ + G + QAAC AC KL G L
Sbjct: 461 FFQCAETREGMRTFTISLPQPSSIRPIT--GPPRKFPPDSLQAACYLACSKLLDEGMLDY 518
Query: 635 NLLPDIVVEKHDAQKRGNEP 654
+ P ++ G+ P
Sbjct: 519 RMFPQRLLSTGSQSTWGDRP 538
>gi|195997771|ref|XP_002108754.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
gi|190589530|gb|EDV29552.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
Length = 1018
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 236/465 (50%), Gaps = 49/465 (10%)
Query: 909 RQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 968
R + + SKI+ EL PELC+ +S S + T +PS + R+++LLLA LK++L
Sbjct: 552 RNTQSETSSKIT-ELIPELCKRYF--LSASVWKVITCIPSFLWRMETLLLAHELKDVLFG 608
Query: 969 HC-MQNVTIP-----TIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNN 1022
+ ++I T+K+LEA+T + ++D LE LE LGDSFLK+ + LF ++
Sbjct: 609 SIPINGISISKNQTFTLKLLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKY 668
Query: 1023 HEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD---PKMWIIPGDNSGSYELND-- 1077
HEG L+ + +I+ N L KLG + +I + F+ + WI PG S ++ +
Sbjct: 669 HEGQLTNELTKIVRNDNLLKLGKSTPICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLD 728
Query: 1078 ---DSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV- 1133
S +G K +K SK++ADV++A++ A L E F+ + + F
Sbjct: 729 EKVTSDLDGDK--AVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTI 786
Query: 1134 ------------NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE 1181
N+ +++ N+ LE ++ YSF++ ++ ALTH SY +
Sbjct: 787 NASAASLLPDDDNISSNEINKIYETN--NLERLEKVIGYSFQNKLFMIRALTHSSYHHHD 844
Query: 1182 IP-RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH 1240
I Q+LEFLGD +L Y+I + +N +P P L D + A VNN C A+ + G+
Sbjct: 845 IAIESNQKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVS 904
Query: 1241 KHILHASHELYKRIN-----ITVDSFEKLSLGSTFGWESV-------TSFPKALGDIIES 1288
K++ S +L++ I+ IT D + E++ PK + D++E+
Sbjct: 905 KYVFQESPDLFRDIDQFAKIITCDYMIDDEMNYNDRTEALFENFTEEVKIPKPVSDVVEA 964
Query: 1289 LAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTE 1331
L GAI++D+G + V +++ PLL+P I+ + P+R+L E
Sbjct: 965 LIGAIYIDTGESIAEVTKALMPLLQPRISLVLRDIPISPIRQLYE 1009
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 117/210 (55%), Gaps = 11/210 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY-LLRKP---SPFVAVFLVPKV 78
R YQ E LE AL+ N I+ L TGSGKT IA+ML++ + +L KP FLV V
Sbjct: 20 RAYQSELLEAALRSNAIICLNTGSGKTFIAVMLIKKLQHEILPKPLDQGGKKTFFLVNTV 79
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
L QQ++ ++ T KVG Y GD VD W+ W E+ +VLVMT IL L+ Y
Sbjct: 80 PLARQQSDVLRKETPFKVGDYVGD-DVDLWNKTKWVYELDSQQVLVMTADILAQILQHGY 138
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
K++ I +LI DECHHA G H Y IM ++ ++ ++ PRIFGMTAS K
Sbjct: 139 IKVSQINLLIFDECHHAVGNHTYVQIMRDYVYKEQKSK----PRIFGMTASVFHGKCRIG 194
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSN 228
+ + KI LE ++ S+V T + L+N
Sbjct: 195 QIE--NKIRSLEAILLSRVVTTSYRQDLAN 222
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 67/274 (24%)
Query: 390 CIIFVERVITAIVLQSLLSELLPRHCTW---KTKYIAGNNSGIQCQ------SRKKQNEI 440
IIF E+ A L S+L ++ + K+ ++ G+ + + S +Q
Sbjct: 253 AIIFTEKRCVAYALSSILDKVAEHDNAFSCIKSDFVVGHGTRVSSSLVATNMSHNQQTRA 312
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ +FRR VN++VAT++LEEG+DV CNLV+ FD +T S++Q++GRAR Q++ Y+++V
Sbjct: 313 INKFRRQDVNILVATNVLEEGIDVPKCNLVVRFDEIKTFGSYLQAKGRARAQHAHYIILV 372
Query: 501 ---KSGDS----TTQSRLENYLASGNKMR-----KEVLSHASLPCSPLNNHMYGEDFYHV 548
K D+ +T S LE YL + R ++ L+ SL P Y V
Sbjct: 373 EKDKIADARDQFSTWSYLERYLQDQCQCRAVGTEEDYLADDSLNLVPP---------YEV 423
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQ 608
ESTG T+S++ T+ LP++ P+ I
Sbjct: 424 ESTGAKVTMSNT--------------------------------TIQLPSSSPLPDSIT- 450
Query: 609 GNI----KTLKQAACLEACKKLHQIGALTDNLLP 638
G + K K + L C++LH+IG L DNL+P
Sbjct: 451 GPLAITEKRAKASTALLVCQELHEIGQLDDNLVP 484
>gi|195424855|gb|ACF96960.1| dicer-1 [Litopenaeus vannamei]
Length = 2473
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 235/539 (43%), Gaps = 119/539 (22%)
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
+ + + + + LL+H + ++ +L+A+T + +LE LET+GDSFLKYA +
Sbjct: 1942 EEMSFSFDFQPDLLNHPGPSPSV----ILQALTMSNANDGVNLERLETIGDSFLKYAITT 1997
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD------PKMWIIP- 1066
L+ TY HEG LS + + +SN L +LG + L + F+ P + +P
Sbjct: 1998 FLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPR 2057
Query: 1067 ------------------GDNSGSYELNDDS---LFNGRKIYVTGRKK------------ 1093
D G ++L D L R + K
Sbjct: 2058 ELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSKSEQATSELMATQN 2117
Query: 1094 -----------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+ K++AD VEALIGA+L+T G L+F+ +GIKV +P
Sbjct: 2118 PHDPPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKV----LP 2173
Query: 1137 YQRQFQVHAERLVNVRHLES-----------------------------LLNYSFRDPSL 1167
+ A L+ HLES + Y+FRD S
Sbjct: 2174 CTLESSPEACELITYGHLESPQSPPYHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSY 2233
Query: 1168 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN
Sbjct: 2234 LLQASTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNN 2293
Query: 1228 DCYALSSVKHGLHKHILHASHELYKRINITVDSFEK----------LSLGSTFGWESVTS 1277
+A +VK+ HK+ H S + I V E+
Sbjct: 2294 TIFASLAVKYDYHKYFRHFSPGPDRVIRDFVKMQEENGHKINEEYYFMEEDEREAAEDIE 2353
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTE 1331
PKALGD+ ES+AGAIF+DSG + + V+ + M+ PE RF P+REL E
Sbjct: 2354 VPKALGDVFESVAGAIFLDSGSSLDAVWS----VYYTMMCPEIERFSGVVPKSPIRELLE 2409
Query: 1332 YCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ KP + GK V+VE+ G + + + + AK A K L+ L+
Sbjct: 2410 M-EPETAKFGKP-ERLVDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2463
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 132/282 (46%), Gaps = 46/282 (16%)
Query: 391 IIFVERVITAIVLQSLLSEL----------LPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
+IFV A ++ LL EL P++ + + + + + KKQ E+
Sbjct: 931 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAE-HKKQEEV 989
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ FR N++V+T +LEEG+DV CNLV+ FDP S++ S GRAR ++ Y ++
Sbjct: 990 LRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLI 1049
Query: 501 KSG-------DSTTQSRLENYLAS--GN---KMRKEVL-SHASLPCSPLNNHMYGEDFYH 547
D T S + L S G+ +EVL S A+ +P +
Sbjct: 1050 TKNQEISFLHDMATYSAFQQVLVSHCGSVEVGTDREVLSSEANAAHAP-----------Y 1098
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN--KEMGI------CTLYLPNN 599
+ T++S++ L+ YC++LPSD + + T + + KE C + LP N
Sbjct: 1099 ITPAEAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIKEAEALTPVYKCKIMLPIN 1158
Query: 600 CPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
P++ I Q + K AA LE C++LHQ+G L D L P
Sbjct: 1159 SPLKGTIEGPWQKKVSLAKMAAALECCRRLHQMGELDDQLQP 1200
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-------PFVAVFLV 75
R YQ+E ++ LK NT+ L + S +T + M+ R A+L R + +
Sbjct: 18 REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P +V + EAI+ +T+L V Y V+ W + W + ++ +V++MT +L GL
Sbjct: 78 PGLV---RAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQVIIMTVDVLEKGLE 134
Query: 136 LSYFKLNMIKVLILDECH 153
+L+M+ +L++ + H
Sbjct: 135 TGLLQLDMLNLLVITDAH 152
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HLN S F + T++K+Y +YG+Q+C +PLL+ GR
Sbjct: 1428 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1485
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
++++ ++ K + + + L PELC I P SL + +P+I+
Sbjct: 1486 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1543
Query: 951 HRLQSLLLAVNLK 963
+R+ +LLLA L+
Sbjct: 1544 YRINALLLADQLR 1556
>gi|336373452|gb|EGO01790.1| hypothetical protein SERLA73DRAFT_85682 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1354
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 255/1019 (25%), Positives = 410/1019 (40%), Gaps = 151/1019 (14%)
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q+E +F G N++V T E LD+ + +LVI +D + S+I + +S
Sbjct: 250 QDETCRKFSLGTHNLLVITKS-NEDLDISASSLVIKYDLFESQLSYIYAWCHTGRCHSYL 308
Query: 497 LLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIAT 556
+ M + GD T + L + + R + L H ED H + T
Sbjct: 309 VHMAEKGDETHRRILSELTSFSQENRTSIEKFKEYRGRFLLPHKL-EDTIHSYDSQTEDE 367
Query: 557 LSSSVSLIYFYCS-------------RLPSDGYFKPTP----KFHINKEMG-------IC 592
SVSL S RL + Y P F INK + C
Sbjct: 368 GEKSVSLKDPVTSNRICLRDATSTVYRLAAAMYDVEKPFDVELFRINKHLDEQGSWTYSC 427
Query: 593 TLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVE------ 643
+ LP + P V + T +++AC C +L G L L P ++
Sbjct: 428 NVMLPAH-PTLRVFTGSSCPTPADARRSACYYTCTELFNAGVLDYRLFPQQRLKPARFLE 486
Query: 644 -------KHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISA 696
K+ + K G N +P P N T + ++ L F+ D A
Sbjct: 487 DDFEEPKKNMSNKNGQATPNHLYPRRKPAFWSNSLTAVFNDTLYPVMVALSG-FSPDQYA 545
Query: 697 RNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVI 756
++L R L + +F L ++L G +++ NQ+ L ++ + + R++
Sbjct: 546 -PVLLLTRHPLP---RMHDFKLFFSGISAPLHLAWGGPLEVDQNQLALLHQYTLRICRIV 601
Query: 757 MDHNLD-KLNEI------LDGFELRDNLEIDYLL-LPSTGQLIDWKTVATVLFPRDNGSK 808
+ LNE+ L R + ++ +P + I W++V
Sbjct: 602 ANKPFACPLNEMAYFYAPLKSDCTRTSSQVQSKWNIPDFSEFICWESVRIA--------- 652
Query: 809 HNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNG 868
+ +T N R V + I + V + L ++ + R
Sbjct: 653 -SRQWATPLNWRNVEDLANDTADAVIQDRWVEFTRRYYVVKTRPDLSPMSKPADSPREAA 711
Query: 869 SVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPEL 927
+ R G+ D+E PL+ + + N+LS + + L PEL
Sbjct: 712 YPNLLEYCKSRRKGLDCLVDQEQPLIEVSKTPGLSNHLSPTFRPLTTSAKASAKYLIPEL 771
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT 987
C + P S T + +PSI R+ +L+ L +H + + L AI+T
Sbjct: 772 CAKLTIPAS--TLRTALLLPSISRRIDDILIVKELNAKFFNHHITEELL-----LAAIST 824
Query: 988 KKCQEDFHLESLETL-GDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
D+ E LE L GD+FLKY +S +F T +EG L V +++IISN AL K C
Sbjct: 825 PSAGFDYDYERLEVLAGDAFLKYLSSIYVFVTNPAKNEGALHVSRQQIISNKALLKTACT 884
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGS----YELNDDSLFNGRK-------------IYVT 1089
LP FI++ F K+W P + S + NDD+ + I
Sbjct: 885 VGLPPFIQSRPFSYKVWQPPNFSLVSIREDFTPNDDTKKISKAPSQSPLARKETEAIMEA 944
Query: 1090 GRKKVKS----------------------------------KTVADVVEALIGAFLSTGG 1115
KK++S K +ADVVEA+IGA +GG
Sbjct: 945 PPKKIESEDSVKGKALPGSHASSKKENRGQQDTQYTQWLGDKAIADVVEAIIGAAYISGG 1004
Query: 1116 ENVGLIFLDRIGIKV-------DFVNVPYQRQFQVHAE-RLVNVRHLESLLNYSFRDPSL 1167
++ L + I + DF +V A+ R ++ +E+++ + F P L
Sbjct: 1005 RDLALTTAKTLDIPIRNIEHWADFGRKALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHL 1064
Query: 1168 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
L +ALTH S + CY+RLEF+GDA+L++++ +++N+ +SPG LT M+ A V+N
Sbjct: 1065 LAQALTHASVQGYQ-STCYERLEFIGDAILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSN 1123
Query: 1228 DCYALSSVKHGLHKHILHASHELYKRINITVDSF-----EKLSLGS----TFG--WESVT 1276
A V GLH+HIL+ S L I +D E+ L + T G W V
Sbjct: 1124 SALAAVCVWSGLHEHILYESFPLAGNIQGYIDELKKKQTEEYELAAREQRTPGQFWLDVE 1183
Query: 1277 SFPKALGDIIESLAGAIFVDSG---CNREVVFQSI-RPLLEPMITPETMRFHPVRELTE 1331
PKAL D++ES+ GAI++ G E+VF +I +P IT +T+ HP + + E
Sbjct: 1184 P-PKALSDVVESIIGAIYISDGFQPIGSELVFNNILKPFYNKHITLKTLSHHPTKVILE 1241
>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1453
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 184/669 (27%), Positives = 300/669 (44%), Gaps = 91/669 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQLE +++QN IV ++TGSGKT +A+ LR A L R + + FL P V L
Sbjct: 70 SRAYQLEMFAESMRQNIIVAMDTGSGKTQVAV--LRIKAELERTATEQIVWFLAPTVSLC 127
Query: 82 PQQAEAIKMHTDLKVGKYW-GDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ +K K+ GD VD W D A W + ++V T QILLD L ++
Sbjct: 128 AQQLAVLKSQIPAVQIKFLSGDDNVDSWSDQAVWDAVLLNVRIVVSTYQILLDALSHAFV 187
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP-IKSKVSSS 198
++ + +++ DE H+ GK + IMT FYH + + +P I G+TASP SKV S
Sbjct: 188 RMERLSLIVFDEAHNCVGKSPGSKIMTNFYHPH-KRDERRVPHIMGLTASPTFGSKVESI 246
Query: 199 E--QDYWQKIHDLETLMNSKVYTCASESVLS--NFIP---FSTAK--------FKFYKYD 243
+ + T+ + C + L+ F+P + T K +
Sbjct: 247 NVLESTLDAVCKTPTMHRDDLLACVKKPELTFVEFLPKPDYRTPKSLQTLRNAIRSLDIS 306
Query: 244 EIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL 303
E P L+ E E + E+ + +++ ELG W
Sbjct: 307 EDPFVLHLQ-------AEGTDRSKRELFAVLESHDTYVHNQMTSFGRQANQICRELGPWA 359
Query: 304 ALKAAETISCYESDFFAWEQLDGFGETI------IKKFGSDASQALVTYVPSGAEWSIGD 357
A +++ WE + F + ++ + D + L + +
Sbjct: 360 A------------EYYIWEVITRFDSAVRSQSRWLEAWKEDEKKYLGKIL---GQIECRR 404
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW 417
S + +L+EK+ LIE L + + DI I+F + T VL LL+ H
Sbjct: 405 PSPTEISRDVLSEKVFILIEQLFQDK--VDITGIVFAKERATVAVLGHLLTS----HEAL 458
Query: 418 KTKYIAGNNSGI-QCQSRKKQN---------EIVEEFRRGLVNVIVATSILEEGLDVQSC 467
+ KY G G Q Q+RK+ + + +FR G +N+++ATS+LEEG+DV +C
Sbjct: 459 RAKYRVGAMMGTSQYQARKRDIWDLSRTEDLQSLHQFRSGKINLLIATSVLEEGIDVPAC 518
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ--SRLENYLASGNKMRKEV 525
NLVI FD + SFIQ RGRARM++S L+++ ++ +Q +E + + ++
Sbjct: 519 NLVICFDRPPNLKSFIQRRGRARMRDSKLLMLLDRSETFSQEWESMEAEMKRQYEQQERE 578
Query: 526 LSHASLPCSPLNNHMYGEDF----YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
L H L E+ ++VE+TG + L + S + +C R+ S G F
Sbjct: 579 LEH-------LQQIEEAEELADMQFNVETTGALLDLDIAKSHLDHFC-RILSPGEFIDWR 630
Query: 582 KFHINKEMGIC-------TLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEACKKLHQI 629
+I K++ T+ LP+ P +++ ++ K+ K A A +A L++
Sbjct: 631 PDYILKKLDNTDAPDLRYTVVLPSYLPAEVRSAESKSTWKSEKNAMKDAAFQAYVALYRA 690
Query: 630 GALTDNLLP 638
G + DNLLP
Sbjct: 691 GLVNDNLLP 699
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 228/522 (43%), Gaps = 98/522 (18%)
Query: 881 YGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSK---ISFELPPELCRIIMAPISL 937
YG + P L + ++L + + + PS S P + ++ P
Sbjct: 881 YGFEKAPQDVPYLTLTKWSRRSDFLHRPQSDPSQAPSNPKPYSRVYPVPMAKVDAIPAKY 940
Query: 938 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE-AITTKKCQEDFHL 996
+ F +PSI+HR+++ L+A L LL + + I ++ AI+ E +
Sbjct: 941 AHFG--VLIPSILHRIETCLVAKELSTTLL----RPLAIDDWSLVHTAISAGSAAEPTNY 994
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E LE LGDS LK++A+ + + E LLS KK+ I++N+ LCK + L FI T+
Sbjct: 995 ERLEFLGDSILKFSATINVAALNPDWPERLLSFKKDSIVANSTLCKAAIKHGLDRFILTK 1054
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGRKIYV---------TGRKKVKSKTVADVVEALI 1107
F + W R IYV T +++ +KT+AD+VEALI
Sbjct: 1055 PFTGQKW--------------------RPIYVEDVLKRGEDTSTRRISTKTLADIVEALI 1094
Query: 1108 GAFLSTGGENVGL--------IFLDRIGIKVDFVNVPYQRQFQV---HAERLVNVRHLES 1156
GA + GGE+ GL IFL +I K ++ Q + V + E ++ LE
Sbjct: 1095 GASMIDGGEDGGLSKALDCMSIFLQQI--KWRRIDDCRQLLYDVAPDNVELPSTLKPLEE 1152
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ Y F SLL++++TH S C +RLEF+GDAVLDY+I L++ P LS
Sbjct: 1153 LIGYDFDKKSLLIQSMTHASSNFGNPLGCLERLEFIGDAVLDYIIVNRLFSIRPHLSHQS 1212
Query: 1217 LTDMRSASVNNDCYALSSVKHG--------------------------LHKHILHASHEL 1250
+ +++A VN D S++ L K + H S +
Sbjct: 1213 MHLLKTAVVNGDFLGFLSLEQSVEQEEVVIGEIRDKVPELKRSRFTLPLWKFMRHQSSAV 1272
Query: 1251 -YKRINI----------TVDSFEKLSLGSTFGWESVTSFP--KALGDIIESLAGAIFVDS 1297
++INI +D+ E G+T+ W + K DI ESL GA++VD+
Sbjct: 1273 GLEQINIEKRHAEMRGPIIDAMEH---GATYPWALLARLQLRKFYSDIFESLLGAVWVDA 1329
Query: 1298 G----CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK 1335
G C + V I L+ ++ HP EL K
Sbjct: 1330 GDMKVCEQVVERFGILGCLDRILRDGVHCLHPKEELGHLADK 1371
>gi|443725259|gb|ELU12939.1| hypothetical protein CAPTEDRAFT_223153 [Capitella teleta]
Length = 1651
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 236/506 (46%), Gaps = 101/506 (19%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+ +T + F+LE LET+GDSFLK+A + L+ Y HEG LS + + +SN L
Sbjct: 1134 ILQTLTMSNANDFFNLERLETIGDSFLKFAITVYLYCEYPGIHEGKLSYLRSKQVSNYNL 1193
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWI---------------------IPG-------DNSG 1071
KLG ++ LP + F+P + W+ IP + SG
Sbjct: 1194 YKLGKKKGLPDCMVAVKFEPTENWLPPGYVIRKEGAYKGLNVRIASIPAPLLAPAFNESG 1253
Query: 1072 SY---ELND-----------------DSLFNGRKI-------YVTGRKKVKSKTVADVVE 1104
S +L D D G I + + + K++AD VE
Sbjct: 1254 SKKEEQLPDGQMEKFTKELEECTKAEDEKLKGSDIPHMLIPYNLQTQHSLPDKSIADGVE 1313
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNV-PYQRQ----------------FQVHAER 1147
ALIG +L T G+ L F+ +G++V NV P + H
Sbjct: 1314 ALIGCYLVTCGQRAALQFMSWLGLRV-LPNVKPADKNNLAMSGFSCLPPPPSPLLTHVSN 1372
Query: 1148 LVNV-RHL-------ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
+V +HL E + Y FRD S L++A TH SY + CYQRLEFLGDA+LDY
Sbjct: 1373 SEDVLKHLLDGYEEFEEKICYKFRDRSYLLQAFTHASYHYNTVTDCYQRLEFLGDAILDY 1432
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV- 1258
+IT +L+ SPG LTD+RSA VNN+ +A +VK HK+ S +L+ I+ V
Sbjct: 1433 VITRHLFEDSEKHSPGVLTDLRSALVNNNIFAALAVKWNFHKYFRAISPQLFYVIDKFVT 1492
Query: 1259 ---DSFEKLSLGSTFGWESVT--------SFPKALGDIIESLAGAIFVDSGCNREVVFQS 1307
D ++++L FG PKALGDI ES+AGAI++DSG + + V+Q
Sbjct: 1493 WQKDRNDEINLDEEFGELEEDGEGTEEDIEIPKALGDIFESVAGAIYLDSGMSLDTVWQV 1552
Query: 1308 IRPLLEPMITPETMRF--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLF 1365
+++P I T R PVREL E + +KP + + GK VTV V G
Sbjct: 1553 YYRMMKPQIDAFTERIPKSPVRELLEM-EPETAKFEKPERT-MDGKIRVTVNVVGKGNF- 1609
Query: 1366 EHTFLDADKKTAKKVACKEVLKSLRA 1391
+ + + AK A K LK +++
Sbjct: 1610 --RGIGRNYRIAKSAAAKRALKHIKS 1633
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 141/278 (50%), Gaps = 29/278 (10%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK-------YIAG------NNSGIQCQ 432
E + ++FVER TA VL L+ EL C W T +I G NNS Q
Sbjct: 421 ESLCGVVFVERRHTAFVLNKLIVEL----CNWDTDLFFVQSHHICGGAAGPTNNSSQQTP 476
Query: 433 SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQ 492
KKQ EI++ FR+ +N++V+TS+LEEG+D CNLV+ FD + S++QS+ RAR
Sbjct: 477 LYKKQEEILKRFRQKDLNLLVSTSVLEEGIDFPKCNLVVKFDAPTSYRSYVQSKARARAL 536
Query: 493 NSDYLLMVK-SGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY--HVE 549
S Y ++ + + + L Y N + + L P ++ ++F +V
Sbjct: 537 KSKYYILTEPTNQGPFHTTLSTYKGIENILISKCLQSRENPLRDDDDASLPDNFMPVYVS 596
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNNCPIQ 603
G T+SS+++L+ YC +LPSD + TPK + ++E TL LP N PI+
Sbjct: 597 PGGAKVTMSSAIALVNRYCGKLPSDAFTHLTPKCQVQAINEADQETWRATLQLPINSPIK 656
Query: 604 TVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
I A + K A L+ C+ LHQ G L D+LLP
Sbjct: 657 RPIYGEAMPSRKLAMMAVALKTCEILHQQGELDDHLLP 694
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 97/177 (54%), Gaps = 14/177 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA---VFLVPKVV 79
R YQ+ LENALK NTIV L S KT IA+ML++ A+ +R+P +FLV
Sbjct: 17 RTYQVALLENALKHNTIVCL--ASRKTFIAVMLIKELAHQVRQPLQLGGKRTLFLVYSDD 74
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
V Q + + +HTDL VG+ D V A W+EE KH+VLV++ Q+ ++ L
Sbjct: 75 DVEAQVKVLGLHTDLSVGECCADSTV-----AQWQEEFVKHQVLVISAQVFVEILLQGAA 129
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+++ +LI D+C HA Y IM +FY + + PRI G+T S + ++S
Sbjct: 130 QISQTNLLIFDDCQHAIEDPAYEKIM-QFY---TDQTNGQRPRILGLTTSILSEQIS 182
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 1157 LLNYSFRDPSLLVEALTHGS----YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
L+N+ P L+++ LT + + L +RLE +GD+ L + ITVYLY +YPG+
Sbjct: 1123 LVNFIGPSPCLILQTLTMSNANDFFNL-------ERLETIGDSFLKFAITVYLYCEYPGI 1175
Query: 1213 SPGYLTDMRSASVNN-DCYALSSVKHGL 1239
G L+ +RS V+N + Y L K GL
Sbjct: 1176 HEGKLSYLRSKQVSNYNLYKLGK-KKGL 1202
>gi|302901921|ref|XP_003048541.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
gi|256729474|gb|EEU42828.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
Length = 1381
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 191/675 (28%), Positives = 311/675 (46%), Gaps = 87/675 (12%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
EE A + R YQ E LE +L++N IV ++TGSGKT +A++ ++ L K SP
Sbjct: 6 EESPAPEIINPRAYQREMLEQSLERNVIVAMDTGSGKTQVAVLRIQVE---LEKSSPDKI 62
Query: 72 VFLVPKVV-LVPQQAEAI-KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
++ + K V L QQ + I + + + + G + +D W W + ++ ++V T +I
Sbjct: 63 IWFLGKTVSLCEQQFKVIQRQNPSVSMKILTGQLNIDAWSPEVWPKILNGTRIVVSTFEI 122
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L D L + K++M+ +++ DE H+ + IM FYH G +P I G+TAS
Sbjct: 123 LHDALTHGFVKMSMLSLIVFDEVHNCVKRSSGRKIMLNFYHEDKNAG-LPVPAILGLTAS 181
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESV-------LSNFIPFSTAKFKFYKY 242
P+ S +S +ETL N+ C + +V N + +++ K
Sbjct: 182 PVISSDLAS----------IETLENTMDAICTTPTVHREELLQCVNKPHLVRSVYEYKKR 231
Query: 243 DEIPH---ALYT-----HLADELAMIELKHTRSLENLD-LNEA---QAELIRKKVSKINS 290
E+ + AL+T + + ++ R+ ENL L +A + ++ + +
Sbjct: 232 SELTNLMRALHTAYQNMDITTDPEVLRFSRCRNEENLKRLRDAIMRNDTFSQNQMKGLWN 291
Query: 291 TLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG 350
L ELG W A + +S +DF + ++D +T + ++ L Y+
Sbjct: 292 RSRVILEELGSWAADR---YVSRLIADFLS--RVDAPDDT----WSNENRTYLAGYLRGV 342
Query: 351 AEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL 410
S+G++ D L+ K LI LL +D+ IIFV+ TA VL LL+
Sbjct: 343 PISSLGNEPPTATD---LSHKAAKLIHELLA--AGDDVVGIIFVKERTTANVLCDLLNSS 397
Query: 411 LPRHCTWKTKYIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVIVATSILEE 460
P + +Y G G + QN +I+E+FR G+VN++VATS+LEE
Sbjct: 398 PPV----RARYRVGAMVGTSSSRSRTQNMYEFNNGTSTQILEDFRSGVVNLLVATSVLEE 453
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNK 520
G+DV +CNLV FD + T+ SFIQ RGRARMQ S M+ S T SR L G K
Sbjct: 454 GIDVPACNLVACFDETTTLKSFIQRRGRARMQESK---MIAMESSLTSSRTWEELEEGMK 510
Query: 521 MR-----KEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
R +E+ L S + +Y Y ++S+G L ++ + +C +
Sbjct: 511 RRYQDDQRELERLDELARSEQTDSIY----YIIKSSGARLDLDNARQHLEHFCQVVFKAD 566
Query: 576 YFKPTPKFHINKE-------MGICTLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEAC 623
Y P++ KE M L LP+ P ++ + + K+ K A A A
Sbjct: 567 YVDRRPEYIFQKEQNELGEDMLRAVLTLPSGLPANLRKFRSSSSWKSEKNAMKDAAFRAY 626
Query: 624 KKLHQIGALTDNLLP 638
L + G +++NLLP
Sbjct: 627 VALIEEGLVSENLLP 641
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 199/432 (46%), Gaps = 58/432 (13%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLG 1003
+PSI+H + L+A L LL Q V I ++ VLEAI+++ E E LE LG
Sbjct: 888 LIPSIIHEIGVQLVASELSTTLL----QPVNINDLQLVLEAISSRSAHEPVDYERLEFLG 943
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DS LKY Q + + EGLL K++++SN L + E L FI +++F + +
Sbjct: 944 DSILKYCTVIQAYAEHPLWPEGLLVPFKDQLVSNKRLHRACLESGLSKFILSKAFTGRSY 1003
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--- 1120
G L+D F + + K +ADVVEALIGA GG + L
Sbjct: 1004 --SGKKWKPLYLDD---FLPEESVEPLDRITGHKNLADVVEALIGASFQDGGMDKALKCI 1058
Query: 1121 -IFLDRIGIKVDFVNVPYQRQFQVHAE-----RLVNVRHLESLLNYSFRDPSLLVEALTH 1174
+FL G K + R ++ + LE L+ YSFR SLL+EA+TH
Sbjct: 1059 SVFL---GDKCHWHEAGRGRDILFNSALDGVPLPPTLEPLEELIGYSFRKKSLLIEAVTH 1115
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
GSY R Y++LEFLGDAVLDY+I ++N P L L +++A VN + A +
Sbjct: 1116 GSYAGDTHQRSYEQLEFLGDAVLDYIIVTKVFNVKPPLPHSDLHLIKTAMVNGEFLAFVN 1175
Query: 1235 VKHGLHK----------------------HILHASHELYKRINITVDSFEKLSL------ 1266
++H L + + + S + TV+ FE L
Sbjct: 1176 LEHRLRRVETDVNADGVTEDTIKTLALWQFMRYTSPAIGNEQVRTVERFETLRREIVDAI 1235
Query: 1267 --GSTFGWESVTSF-PKAL-GDIIESLAGAIFVDSGCNR--EVVFQ--SIRPLLEPMITP 1318
G+ + W + F PK D+ E+L GA++VDSG E VF I P LE +I
Sbjct: 1236 ENGTHYPWTLLARFQPKKFYSDLFEALIGAVWVDSGSTEVCEGVFHRFGILPYLERIIRD 1295
Query: 1319 ETMRFHPVRELT 1330
+ HP EL+
Sbjct: 1296 KVHIKHPKEELS 1307
>gi|148829108|gb|ABR14013.1| Dicer-1 [Penaeus monodon]
Length = 2473
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 235/539 (43%), Gaps = 119/539 (22%)
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
+ + + + + LL+H + ++ +L+A+T + +LE LET+GDSFLKYA +
Sbjct: 1942 EEMSFSFDFQPDLLNHPGPSPSV----ILQALTMSNANDGVNLERLETIGDSFLKYAITT 1997
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD------PKMWIIP- 1066
L+ TY HEG LS + + +SN L +LG + L + F+ P + +P
Sbjct: 1998 FLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPR 2057
Query: 1067 ------------------GDNSGSYELNDDS---LFNGRKIYVTGRKK------------ 1093
D G ++L D L R + K
Sbjct: 2058 ELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSKSEQATSELMATQN 2117
Query: 1094 -----------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+ K++AD VEALIGA+L+T G L+F+ +GIKV +P
Sbjct: 2118 PHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKV----LP 2173
Query: 1137 YQRQFQVHAERLVNVRHLES-----------------------------LLNYSFRDPSL 1167
+ A L+ HLES + Y+FRD S
Sbjct: 2174 CTLESSPEASELITYGHLESPQSPLYHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSY 2233
Query: 1168 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN
Sbjct: 2234 LLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNN 2293
Query: 1228 DCYALSSVKHGLHKHILHASHELYKRINITVDSFEK----------LSLGSTFGWESVTS 1277
+A +VK+ HK+ H S L + I V E+
Sbjct: 2294 TIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYYFMEEDECEAAEDIE 2353
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTE 1331
PKALGD+ ES+AGAIF+DSG + + V+ + M+ E +F P+REL E
Sbjct: 2354 VPKALGDVFESVAGAIFLDSGSSLDAVWS----VYYTMMCREIEQFSGVVPKSPIRELLE 2409
Query: 1332 YCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ KP + GK V+VE+ G + + + + AK A K L+ L+
Sbjct: 2410 M-EPETAKFGKP-ERLVDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2463
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 44/281 (15%)
Query: 391 IIFVERVITAIVLQSLLSEL----------LPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
+IFV A ++ LL EL P++ + + + + + KKQ E+
Sbjct: 931 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAE-HKKQEEV 989
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ FR N++V+T +LEEG+DV CNLV+ FDP S++ S GRAR ++ Y ++
Sbjct: 990 LRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLI 1049
Query: 501 KSG-------DSTTQSRLENYLAS--GN---KMRKEVLSHASLPCSPLNNHMYGEDFYHV 548
D T S + L S G+ +EVLS + N +
Sbjct: 1050 TKNQEISFLHDMATYSAFQQVLVSHCGSVEVGTDREVLSSEA-------NAAHAPYLTPA 1102
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--------CTLYLPNNC 600
E+ T++S++ L+ YC++LPSD + + T + + + C + LP N
Sbjct: 1103 EAA---VTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEEAEVEIPKYKCKIMLPINS 1159
Query: 601 PIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
P++ I Q + K AA LE C++LHQ+ L D L P
Sbjct: 1160 PLKGTIEGPWQSKVSLAKMAAALECCRRLHQMEELDDQLQP 1200
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-------PFVAVFLV 75
R YQ+E ++ LK NT+ L + S +T + M+ R A+L R + +
Sbjct: 18 REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P +V + EAI+ +T+L V Y V+ W + W + ++ +V++MT +L GL
Sbjct: 78 PGLV---RAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQVIIMTVDVLEKGLE 134
Query: 136 LSYFKLNMIKVLILDECH 153
+L+M+ +L++ + H
Sbjct: 135 TGLLQLDMLNLLVITDAH 152
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HLN S F + T++K+Y +YG+Q+C +PLL+ GR
Sbjct: 1428 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1485
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
++++ ++ K + + + L PELC I P SL + +P+I+
Sbjct: 1486 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1543
Query: 951 HRLQSLLLAVNLK 963
+R+ +LLLA L+
Sbjct: 1544 YRINALLLADQLR 1556
>gi|289711908|gb|ACC62400.2| ribonuclease III [Penaeus monodon]
Length = 2473
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 235/539 (43%), Gaps = 119/539 (22%)
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
+ + + + + LL+H + ++ +L+A+T + +LE LET+GDSFLKYA +
Sbjct: 1942 EEMSFSFDFQPDLLNHPGPSPSV----ILQALTMSNANDGVNLERLETIGDSFLKYAITT 1997
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD------PKMWIIP- 1066
L+ TY HEG LS + + +SN L +LG + L + F+ P + +P
Sbjct: 1998 FLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPR 2057
Query: 1067 ------------------GDNSGSYELNDDS---LFNGRKIYVTGRKK------------ 1093
D G ++L D L R + K
Sbjct: 2058 ELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSKSEQATSELTATQN 2117
Query: 1094 -----------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+ K++AD VEALIGA+L+T G L+F+ +GIKV +P
Sbjct: 2118 PHDLPIFIPYNLLTQHSIPDKSIADYVEALIGAYLTTCGPRGALLFMSWLGIKV----LP 2173
Query: 1137 YQRQFQVHAERLVNVRHLES-----------------------------LLNYSFRDPSL 1167
+ A L+ HLES + Y+FRD S
Sbjct: 2174 CTLESSPEASELITYGHLESPQSPLYHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSY 2233
Query: 1168 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN
Sbjct: 2234 LLQAFTHASYYKNRLTGCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNN 2293
Query: 1228 DCYALSSVKHGLHKHILHASHELYKRINITVDSFEK----------LSLGSTFGWESVTS 1277
+A +VK+ HK+ H S L + I V E+
Sbjct: 2294 TIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYYFMEEDECEAAEDIE 2353
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTE 1331
PKALGD+ ES+AGAIF+DSG + + V+ + M+ E +F P+REL E
Sbjct: 2354 VPKALGDVFESVAGAIFLDSGSSLDAVWS----VYYTMMCREIEQFSGVVPKSPIRELLE 2409
Query: 1332 YCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ KP + GK V+VE+ G + + + + AK A K L+ L+
Sbjct: 2410 M-EPETAKFGKP-ERLVDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2463
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 44/281 (15%)
Query: 391 IIFVERVITAIVLQSLLSEL----------LPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
+IFV A ++ LL EL P++ + + + + + KKQ E+
Sbjct: 931 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAE-HKKQEEV 989
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ FR ++V+T +LEEG+DV CNLV+ FDP S++ S GRAR ++ Y ++
Sbjct: 990 LRRFRHHECKILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVLSCGRARGHDTFYFHLI 1049
Query: 501 KSG-------DSTTQSRLENYLAS--GN---KMRKEVLSHASLPCSPLNNHMYGEDFYHV 548
D T S + L S G+ +EVLS + N +
Sbjct: 1050 TKNQEISFLHDMATYSAFQQVLVSHCGSVEVGTDREVLSSEA-------NAAHAPYLTPA 1102
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--------CTLYLPNNC 600
E+ T++S++ L+ YC++LPSD + + T + + + C + LP N
Sbjct: 1103 EAA---VTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEEAEVEIPKYKCKIMLPINS 1159
Query: 601 PIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
P++ I Q + K AA LE C++LHQ+G L D L P
Sbjct: 1160 PLKGTIEGPWQSKVSLAKMAAALECCRRLHQMGELDDQLQP 1200
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-------PFVAVFLV 75
R YQ+E ++ LK NT+ L + S +T + M+ R A+L R + +
Sbjct: 18 REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P +V + EAI+ +T+L V Y V+ W + W + ++ +V++MT +L GL
Sbjct: 78 PGLV---RAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQVIIMTVDVLEKGLE 134
Query: 136 LSYFKLNMIKVLILDECH 153
+L+M+ +L++ + H
Sbjct: 135 TGLLQLDMLNLLVITDAH 152
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HLN S F + T++K+Y +YG+Q+C +PLL+ GR
Sbjct: 1428 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1485
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
++++ ++ K + + + L PELC I P SL + +P+I+
Sbjct: 1486 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1543
Query: 951 HRLQSLLLAVNLK 963
+R+ +LLLA L+
Sbjct: 1544 YRINALLLADQLR 1556
>gi|17738129|ref|NP_524453.1| Dicer-1 [Drosophila melanogaster]
gi|51316117|sp|Q9VCU9.1|DCR1_DROME RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1
gi|7300916|gb|AAF56056.1| Dicer-1 [Drosophila melanogaster]
Length = 2249
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 237/539 (43%), Gaps = 146/539 (27%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1723 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1841
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1842 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1900
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1901 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1956
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1957 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 2016
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 2017 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2076
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF---------------GWESVTSFP 1279
V+HG HK H S L N +D F ++ + E V P
Sbjct: 2077 VRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDV-EVP 2131
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTEYC 1333
KALGD+ ES+AGAIF+DS + +VV+ + M++PE +F P+REL E
Sbjct: 2132 KALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSNSVPKSPIRELLEL- 2186
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
+ KP + VTV+V G TF + + + AK A K L+ L+
Sbjct: 2187 EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2240
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 489 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 548
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 549 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 608
Query: 495 DYLLMV 500
++++V
Sbjct: 609 YHVILV 614
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 816 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 875
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 876 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 912
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 61/316 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V
Sbjct: 18 RDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRARRHG-RVSVYLSCEVGTST 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ M H TDL+V + DM + F W + + V ++ P+ L L
Sbjct: 77 EPCSIYTMLTHLTDLRVWQEQPDMQIPF--DHCW----TDYHVSILRPEGFLYLLETREL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK----- 194
L+ +++++L++CH + Y I F + ++ ++ PRI G+ A P+ S
Sbjct: 131 LLSSVELIVLEDCHDSA---VYQRIRPLFENHIMPAPPADRPRILGL-AGPLHSAGCELQ 186
Query: 195 -----VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF---------- 239
+++ EQ +I ++ Y + PF +
Sbjct: 187 QLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHK 246
Query: 240 -----YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN--STL 292
++YD P+ +Y + M ELK ++ KV +N ++L
Sbjct: 247 SFLLDHRYD--PYEIY---GTDQFMDELK---------------DIPDPKVDPLNVINSL 286
Query: 293 LYCLSELGVWLALKAA 308
L L E+G W +AA
Sbjct: 287 LVVLHEMGPWCTQRAA 302
Score = 40.0 bits (92), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>gi|194910778|ref|XP_001982226.1| GG12488 [Drosophila erecta]
gi|190656864|gb|EDV54096.1| GG12488 [Drosophila erecta]
Length = 2249
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 237/538 (44%), Gaps = 144/538 (26%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1723 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1841
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1842 IKNLSSVQICEMVREKAEALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1900
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQ-------------V 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1901 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLEGANQEHRIPGSTKP 1956
Query: 1144 HAERLVNV----------------------RHL-------ESLLNYSFRDPSLLVEALTH 1174
+ E++V V HL E L Y FRD S L++A+TH
Sbjct: 1957 NVEKMVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEVFEESLGYKFRDRSYLLQAMTH 2016
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 2017 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2076
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV--------------TSFPK 1280
V+HG HK H S L N +D F ++ + PK
Sbjct: 2077 VRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDVEVPK 2132
Query: 1281 ALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTEYCQ 1334
ALGD+ ES+AGAIF+DS + +VV+ + M++PE +F P+REL E +
Sbjct: 2133 ALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSNSVPKSPIRELLEL-E 2187
Query: 1335 KNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
KP + VTV+V G TF + + + AK A K L+ L+
Sbjct: 2188 PETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2240
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 487 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 546
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 547 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 606
Query: 495 DYLLMV 500
++++V
Sbjct: 607 YHVILV 612
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L ++++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 814 TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTMFQYTLRLPINSPLKH 873
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 874 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 910
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 61/316 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRGRQRG-RVSVYLSCEVGTST 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ M H TDL+V + DM + F W + + V ++ P+ L L
Sbjct: 77 EPCSIYTMLTHLTDLRVWQEQPDMQIPF--DHCW----TDYHVSILRPEGFLSLLEDREL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK----- 194
L+ +++++L++CH + Y I F ++ + PRI G+ A P+ S
Sbjct: 131 LLSSVELIVLEDCHDSA---VYQRIRRLFEEHIMPAAPVDRPRILGL-AGPLHSAGCELQ 186
Query: 195 -----VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF---------- 239
+++ EQ +I ++ Y + PF +
Sbjct: 187 QLSAMLATLEQSVLCRIETASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHK 246
Query: 240 -----YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN--STL 292
++YD P+ +Y + M ELK ++ KV +N ++L
Sbjct: 247 SFLLDHRYD--PYEIY---GTDQFMDELK---------------DIPDPKVDPLNVINSL 286
Query: 293 LYCLSELGVWLALKAA 308
L L E+G W +AA
Sbjct: 287 LAVLHEMGPWCTQRAA 302
Score = 40.4 bits (93), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>gi|195572986|ref|XP_002104476.1| Dicer-1 [Drosophila simulans]
gi|194200403|gb|EDX13979.1| Dicer-1 [Drosophila simulans]
Length = 1533
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 235/538 (43%), Gaps = 144/538 (26%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1007 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1065
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1066 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1125
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1126 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1184
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1185 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1240
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1241 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1300
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1301 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 1360
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV--------------TSFPK 1280
V+HG HK H S L N +D F ++ + PK
Sbjct: 1361 VRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDVEVPK 1416
Query: 1281 ALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTEYCQ 1334
ALGD+ ES+AGAIF+DS + +VV+ + M++PE +F P+REL E +
Sbjct: 1417 ALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSNSVPKSPIRELLE-LE 1471
Query: 1335 KNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
KP + VTV+V G TF + + + AK A K L+ L+
Sbjct: 1472 PETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAKCALRQLK 1524
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 100 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 159
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 160 DIVGLPMPTQTLARRLAALQACVELHKIGELDDQLQP 196
Score = 41.6 bits (96), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 375 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 422
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 423 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 480
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 481 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 538
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 539 AVCLPCILYRINGLLLADDIRKQV 562
Score = 40.4 bits (93), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 999 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1055
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1056 LSHLRSKQVAN 1066
>gi|409080003|gb|EKM80364.1| hypothetical protein AGABI1DRAFT_128037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1365
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 258/1035 (24%), Positives = 425/1035 (41%), Gaps = 143/1035 (13%)
Query: 368 LTEKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
++ K + L++ L ++ + D R IIFV++ I A +L +L+ +PR + I+ N
Sbjct: 362 VSHKFILLVQQLEAHQILGDNFRGIIFVQKRIVAQLLVALIHISMPR--LQFLRPISLTN 419
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
+ S + + ++F G N+++AT E+ + +VI+FD + S +R
Sbjct: 420 YRVLSDSEAFER-MTQQFVSGEYNLLIATKSFEDA-GLPKAPVVILFDVFESQISRAYTR 477
Query: 487 GRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL---------PCSPL- 536
A +Q + M++ G+S L +Y S + + E++ A+ P P
Sbjct: 478 RCASVQGGYLIHMLEQGNS-----LHHYALSHSALDPEMIRWATTLENDYFNRAPPQPPQ 532
Query: 537 -NNHMYG------EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
+N Y D ++ T + + S I F+ +D K F +
Sbjct: 533 ESNDPYSSDSEDDRDLEVIQDPITGHHIRKNQSTIAFHRYAARADAQTKCEDLFKFVSQK 592
Query: 590 GI-----CTLYLPNNCPIQTVIAQGN-IKTL-KQAACLEACKKLHQIGALTDNLLPDI-- 640
C + L P+ V K L ++ AC AC +L G L
Sbjct: 593 STYSEWRCRINLAGT-PVDGVSGPAAPTKALARKEACYIACLRLQHFGLLDSAFFFRTRA 651
Query: 641 -VVEKHDAQKRGNEPYNA---EHP-IYFPPELVNQSPQDTKITYHCYLIELKQHFNYDIS 695
VE HD P++ E P I PE S + Y I + F
Sbjct: 652 RKVESHDETFDCPGPHSGSIHERPHIPLTPEFWKNSILTSPSLRFLYPIVVSIPFPVSSV 711
Query: 696 ARNIVLAMRTELESEIKKV-NFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFR 754
+ + T + + + F L + LT+ + + L ++ L +F I R
Sbjct: 712 CEKAPICILTR--AALPPIPQFQLSHDGDALTLQSQRYLPLSLDAGRLDLIHKFTIRFCR 769
Query: 755 VIMDHNLDKLN---------EILDGFELRDNLEIDYLLLPSTGQLIDWKTVATVLFPRDN 805
+IM+ + L+ + ++ D+ E D + IDW+ V+ V
Sbjct: 770 IIMNKPFEALSYKNLGYMFAPLRKAWKPPDDEEYDL------SEDIDWEMVSVV------ 817
Query: 806 GSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTR 865
+ N + F K I + V + +I CI + +
Sbjct: 818 ----SENWAVPFGDLTQLRKEAE--DALIQDRAVEFTNRYEILCIREDMTPTSE----VE 867
Query: 866 NNGSVTTYKKHYEERYGIQ-LCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELP 924
G T ++ Y R + L +P+L R+ NYL+ Q + P+K + L
Sbjct: 868 GKGGKTLLEQCYSRRKNFEGLAHPNQPILEVMRMPAPTNYLNPPISQLEL-PAKTTQYLI 926
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PE CR + +S ST +PSI+ R+ LL L L+HC+++ + + A
Sbjct: 927 PECCRRLT--VSASTLRMGYLLPSIIRRIDEFLLIKQLNAKNLNHCVKDDLL-----IMA 979
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
++ D++ E LE LGD+ LKY ++ +F N EG L ++R ISN LC +
Sbjct: 980 TSSPLAGNDYNYERLELLGDALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQLCDIV 1039
Query: 1045 CEQKLPGFIRTESFDPKMWIIPG--------DNSGSYELNDDSLFNGR-------KIYVT 1089
LPG+I+ + F+ K W+ PG +++ + DD N R +I +
Sbjct: 1040 SGWGLPGYIQLKPFNIKSWLPPGMIIDDRQKESTVGGGVMDDGHLNMRPAQPNEDRIGAS 1099
Query: 1090 GR-------------KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
R + +KTVADV EA+IGA +GG + L + + F +V
Sbjct: 1100 KRPKNKKRRLNKKTSSPIANKTVADVAEAIIGAAYISGGRDSALKATK--ALMIPFTDVE 1157
Query: 1137 YQRQF--QVHAERL-------VNVRH-LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY 1186
F + A RL +V H +E++ + F+ PSLL LT S + + +
Sbjct: 1158 EWADFGRKASAPRLDTGHAPEPSVMHFIETITGFRFQQPSLLRLTLTQNSMEMKD----H 1213
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHK--HIL 1244
QRLEFLGDAVLD+L+ YLY+K SPG L+ M+S V+N A V GLH+ H+
Sbjct: 1214 QRLEFLGDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLHRFVHVR 1273
Query: 1245 HASHE--------LYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
+ L R S K + T+ W + PK L D+IES+ GA ++
Sbjct: 1274 QQQKQVVWDYEKALRGREAAETSSTSKEAARVTYFWMDL-DVPKVLSDVIESIIGAAYIS 1332
Query: 1297 ---SGCNREVVFQSI 1308
S EV+F +
Sbjct: 1333 DDFSQAGVEVIFDKM 1347
>gi|440632208|gb|ELR02127.1| hypothetical protein GMDG_05286 [Geomyces destructans 20631-21]
Length = 1377
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 190/671 (28%), Positives = 301/671 (44%), Gaps = 88/671 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQLE E ++ +NTIV ++TGSGKT IA+M R A L R P FL P V L
Sbjct: 31 SRLYQLEMFEASMARNTIVVMDTGSGKTHIAVM--RIQAELERCPPQKRVWFLAPTVTLC 88
Query: 82 PQQAEAIK-----MHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLR 135
QQ ++ + T L VG VD W + W + ++V T +L D L
Sbjct: 89 EQQYTTLRTNIPYVQTRLLVGSD----NVDRWSEQRIWDAVLENVRIVVSTHGVLSDALS 144
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-TGDSNLPRIFGMTASP-IKS 193
+ ++ + +L+ DE HH G+H IM +YH LL G + +P I G+TASP I+S
Sbjct: 145 HGFVRIEELTLLVFDEAHHCAGEHPANKIMKNYYHPLLALKGPNAVPHILGLTASPVIRS 204
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESV-----LSNFIPFSTAKFKFYKYDEIPHA 248
K S DLE + + C + V L P + + + I +
Sbjct: 205 KPS-----------DLEIIERNLNALCRTPRVHRGELLEYVHPPTFVRLAYLSNPSI-YG 252
Query: 249 LYTHLA-DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
YT A L ++ T S + D +++ +++ + ELG W A
Sbjct: 253 QYTSPALVNLTIVYANATNSSASQD-----SDIDLRELKSFCRKSRHIYDELGQWAA--- 304
Query: 308 AETISCYESDFFAWEQLDGFGETIIKKFG------SDASQALVTYVPSGAEWSIGDDSKF 361
D++ +D + K+ G S AL+ + + +
Sbjct: 305 ---------DYYIKTSVDIWSAAETKRNGDPFFDNGKRSNALLKLLRHQVQSASSALDSS 355
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY 421
+ D T K+ L+ L Y G D+ IIFVE+ T VL LLS H K
Sbjct: 356 HPDEMNTTRKVRQLVRFLTSY-GNGDLHGIIFVEQRATVAVLHQLLS----LHPMTKGML 410
Query: 422 IAGNNSGIQCQSRK-----------KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
G G S + +Q + ++ FR+ N I+ATS+LEEG+D+ +CN+V
Sbjct: 411 RCGTFIGTSSFSSRKSSLGDWLTPLEQMDTLDCFRKKDKNFIIATSVLEEGIDISACNIV 470
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS 530
I F+ + SFIQ RGRAR S ++L+V S D + + + N++R+E AS
Sbjct: 471 ICFNKPPNLKSFIQRRGRARKSRSIFVLLVSSDDRSLGP--QEWGDMENQIREEYQKDAS 528
Query: 531 -----LPCSPLNNHMYGED--FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF 583
H+ G + ++STG + TL ++V+ I+ +C+ LP Y PKF
Sbjct: 529 KRQKLQQLEDAEEHVEGRSNARFEIKSTGALLTLETAVAHIHHFCATLPPQPYVDLQPKF 588
Query: 584 HINKEM-GICT--LYLPN--NCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDN 635
+ + G+ T + LPN + ++T + K+ + A A +A L++ G + +N
Sbjct: 589 YFQESFYGLITGNVTLPNCVDSSVRTASSGWEWKSERMAKKDAAFQAYVALYKKGLVNEN 648
Query: 636 LLPDIVVEKHD 646
LLP ++ ++ D
Sbjct: 649 LLPLLLGKEED 659
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 196/462 (42%), Gaps = 76/462 (16%)
Query: 893 LNGRRIFHVQNYLSKCRQQKQKEPS-KISFELPPELCRIIMAPISLSTFYSFTFVPSIMH 951
L RR F +++ SK + + + S K + LP E + P + +PSIMH
Sbjct: 848 LPKRRDFLHRSFASKSETENEVDCSEKPALFLPLESSTVDKLP--MEYVECSLLIPSIMH 905
Query: 952 RLQSLLLAVNLKNMLL-DHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYA 1010
RL +A++L N + D N+ V+ A E+ + + LE +GDS LKY
Sbjct: 906 RLWRQAVALDLYNAVFEDQGFLNLDY----VITATNAPSANENSNYQRLEFIGDSVLKYL 961
Query: 1011 ASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG--- 1067
L+ + + EG LS K++ ++N+ L + L +I T++F + W P
Sbjct: 962 VCVNLYASQPSWPEGYLSRAKDQAVANSHLSRAALAVGLDRYIVTKTFTARKWSPPYIQD 1021
Query: 1068 --DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLI--- 1121
D + S E ++ + +K +ADVVEALIG AFL G E
Sbjct: 1022 ILDAASSPE----------------KRTLSTKVLADVVEALIGGAFLDRGYEAAATCISR 1065
Query: 1122 FLD--RIGIKVDFVNVPYQRQFQVHAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSY 1177
FL RI +D + L N + +E L+ Y F++ L+EA+TH S
Sbjct: 1066 FLPEMRITAPLDIFARGIHTESVFAPTSLANGHLADVERLIGYQFKNRGYLLEAITHPSC 1125
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
YQRLEF+GDA LD ++ ++ + P LS G + ++A VN A +
Sbjct: 1126 EHDSHTSSYQRLEFIGDATLDMIVVSFMIDNAPELSHGRMHLTKTAVVNAGFLAYLCMDA 1185
Query: 1238 GLHK-------------------------HILHASHELYKRINITVDS----FEKL---- 1264
L + H+ + IN + S + KL
Sbjct: 1186 SLEQVVTDVALSPNHYSTGFTEVHSSKLVHLCQLMRHQHPEINTAMSSCLERYHKLQPAI 1245
Query: 1265 ----SLGSTFGWESVTSFPKA--LGDIIESLAGAIFVDSGCN 1300
+ G+ + W +TS A L DI+ES+ GA+ +D+ +
Sbjct: 1246 ASAIAHGNEYPWVLLTSLAPAKFLSDIVESIIGAVLIDAAGD 1287
>gi|154300125|ref|XP_001550479.1| hypothetical protein BC1G_10438 [Botryotinia fuckeliana B05.10]
Length = 1398
Score = 186 bits (472), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 185/674 (27%), Positives = 296/674 (43%), Gaps = 92/674 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +LK+N IV ++TGSGKT +A+ LR A L R + FL P V L
Sbjct: 74 RTYQLEMLEESLKRNVIVAMDTGSGKTHVAV--LRILAELERMKPGKIIWFLAPTVALCA 131
Query: 83 QQAEAIKMHT-DLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
Q E ++++ + + G GVD W + W + +V+V + Q+LLD L + +
Sbjct: 132 QHHEYLQLNIPSVLIKMLIGADGVDRWTEQRQWDTVLKDVKVVVSSYQVLLDALTHGFVR 191
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ + ++I DE H+ K A IM FYH LP I G++ASP+ S
Sbjct: 192 MGRLSLIIFDEAHNCVNKAPGAKIMKSFYHPYKSI--FPLPHILGLSASPVMRSSPQSLS 249
Query: 201 DYWQ---------KIH--DLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL 249
D + KIH DL + + + + SN I T A
Sbjct: 250 DIEETLDAICCTPKIHRADLRLRVKLPLLSIIYYTPESNIIVTKTV------------AS 297
Query: 250 YTHLADELAMIELKHTRSLENLDLNEAQAELIR-------------KKVSKINSTLLYCL 296
+ L + E + +L+ D ++Q EL + K + K ++ ++ L
Sbjct: 298 LRKIVQSLNIFEDPYVLTLKRSDSEKSQRELAKVLKSFKTYSQTQLKSIDKTSNEII--L 355
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIG 356
ELG W A T+ A D F D+ A Y+
Sbjct: 356 VELGPWAADYYISTVVTRY--LKAMSAKDTF-------IVEDSPAAEKLYIAKALRQVEI 406
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT 416
S + D+G ++ K+ L+ + + + IIFV+ T S+L+ LL H
Sbjct: 407 SPSTLS-DTGKISNKVEKLLGIIAQQK--PPFSAIIFVQERATV----SVLAHLLSHHPL 459
Query: 417 WKTKYIAGNNSGIQCQSRK-----------KQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
K ++ G G ++ +Q + + F+RG +++++AT++LEEG+DV
Sbjct: 460 TKDRFKIGTMVGTSLNGKRTDQIGELVDVNQQKDTLSSFKRGKIDILIATNVLEEGIDVP 519
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
+CNLVI F + SF+Q RGRAR Q+S +L+ SGD T N+ KMR+E
Sbjct: 520 ACNLVICFSKPANLKSFVQRRGRARQQDSKLILLDASGDKAT-----NWHELERKMREEY 574
Query: 526 ------LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
L H + + +ESTG L S++ +Y +CS L + +
Sbjct: 575 GKEMRELQHI-YEIETADEQSEDDRVLRIESTGAQLDLDSALPHLYHFCSVLTTKDFVDL 633
Query: 580 TPKFHINKEMGI----CTLYLPNNC--PIQTVIAQGNIKTLKQA---ACLEACKKLHQIG 630
P F + E+G + LP + P++ ++G+ + + A A EA L++ G
Sbjct: 634 RPDFVYSSELGSEYVRAKVILPGSVSKPLRVHESRGSWLSERSAAKDAAFEAYSALYRGG 693
Query: 631 ALTDNLLPDIVVEK 644
+ DNLLP +V +K
Sbjct: 694 LVNDNLLPLMVHDK 707
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 206/486 (42%), Gaps = 113/486 (23%)
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSK-ISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
P L ++ ++L K + +K +K S LP C + P LS F +PSI
Sbjct: 884 PYLAVVKVSRRADFLHKVQNEKPSSFTKQFSSVLPASTCVQDVMPAQLSRF--GMMIPSI 941
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE-AITTKKCQEDFHLESLETLGDSFLK 1008
H ++ L+ L +L +++ I +++ AIT D + + LE LGDS LK
Sbjct: 942 THHIEVQLVVDRLSRTIL----KDLEISDQSLIQTAITHASYSLDSNYQRLEFLGDSILK 997
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD 1068
S QL + + HEG LS K+RI+SN+ + E L +I T+ F W
Sbjct: 998 LCTSVQLVAEHLDWHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKW----- 1052
Query: 1069 NSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI 1128
DD + +K +++ SK ++DVVEALIGA L
Sbjct: 1053 ---RPMYVDDLVVTEQKT-----REMSSKILSDVVEALIGASL----------------- 1087
Query: 1129 KVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
R +E +L Y+F SLLVEA+TH SY + +R
Sbjct: 1088 -----------------------RPVEQILAYTFTKKSLLVEAMTHPSYT--SGTQSLER 1122
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL---- 1244
LEFLGD++LD +I +++ LS ++ +RSA VN D A ++ + +++
Sbjct: 1123 LEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNADFLAFLCMEMSIDQNVTNLTE 1182
Query: 1245 ---HASHELYKRINITVDSF---------------------------EKLSLGSTFGWES 1274
H HE + R +++ SF E + G TF W
Sbjct: 1183 GKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRHAELRDQILEAIYTGDTFPWAL 1242
Query: 1275 VTSFP--KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR---------F 1323
++ K D+IESL GA+++DSG + EV Q L+E M MR
Sbjct: 1243 LSRLDARKFFSDMIESLLGAVWIDSG-SMEVCTQ----LIERMGVLRYMRRILKDGVRIM 1297
Query: 1324 HPVREL 1329
HP EL
Sbjct: 1298 HPKEEL 1303
>gi|226286856|gb|EEH42369.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1450
Score = 186 bits (472), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 195/714 (27%), Positives = 323/714 (45%), Gaps = 110/714 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +LK+N I+ ++TGSGKT IAI+ +R + + FL P V L
Sbjct: 31 RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCTEDK--LVWFLTPTVALAD 88
Query: 83 QQAEAIKMHTDLKVGKYW-GDMGVDFWD-GATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ + I + + G V +W W + + +++V TPQILLD L +
Sbjct: 89 QQHKNISQQLSVYQTRLLLGTDKVHYWSTKKIWDDVLLNIKIVVSTPQILLDALSHGFIT 148
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-TG-DSNLPRIFGMTASPIKSKVSSS 198
++ I +L+ DE HH G IM FYH L+ TG ++LP I G+TASP+ S
Sbjct: 149 MSRISLLVFDEAHHCDGFSPANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVTRADPES 208
Query: 199 EQDYWQKIHDLETLMNSKVYTCA-SESVLSNFI---PFSTAKFKFYKYDEIPHA-LYTHL 253
+ +E +N++ T L ++ T KF+ D + H+ + +L
Sbjct: 209 -------LKRVEKNLNARCETPRIHREELMRYVHRPELYTVKFR---TDSLIHSDMLQNL 258
Query: 254 ADELAMIELKHTRSLENLDLNE---AQAELI-----RK-----KVSKINSTLLYCLSELG 300
+ + ++++ ++ L E +Q +L+ RK ++SK+ + +LG
Sbjct: 259 SRIVGTVDIEKDPWIKRLRRQEDRRSQGKLLYALEKRKTHCLSQLSKLLRQAINVHDDLG 318
Query: 301 VWLALK-AAETISCYESDFFAWEQ------LDGFGETIIKKFGSDASQALVTYVPSGAEW 353
W A +E I E+ ++ LD E I + S+ S + P +W
Sbjct: 319 PWAADAFISEVIERLETKRTMYQHVELHSSLDREEEAFIFELLSELSIS-----PVKQDW 373
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ +S +++ K+ L+E LLE D IIF ++ T ++LS L+ R
Sbjct: 374 --------DSESNIVSTKVNLLVE-LLESEHTADFTGIIFAQQRATV----TMLSHLISR 420
Query: 414 HCTWKTKYIAGNNSGIQC-----------QSRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
H K + G G C + Q +++ R G N+++ATS+LEEG+
Sbjct: 421 HPRLKDIIVTGAFLGDACYASRTSTITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEGI 480
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS---GDSTTQSRLENYLAS-- 517
DV +C+LV+ FD + + SFIQ RGRAR + S +++ + S + +RLE + S
Sbjct: 481 DVSACHLVVCFDAIKNLRSFIQRRGRARKERSKFVMFLDSDKISEEKQWTRLEEVMRSIY 540
Query: 518 GNKMRK--EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
+ MR+ +V++ ++ G+ + +ESTG + TL ++ + +C+ L
Sbjct: 541 EDDMRRLEDVMARENIVEE-------GDQYLRIESTGALLTLENARQHLEHFCATLHY-A 592
Query: 576 YFKPTPKFHINKEMGICTL----YLPNNCPIQTVIAQGN--IKTLKQA---ACLEACKKL 626
+ P F ++ G T+ LPN + + G+ KT + A A +A KL
Sbjct: 593 FTDSRPHFIFDESEGDGTIAAKVVLPNVLDPKFRVIHGSKRWKTEQMAQRDASFQAYLKL 652
Query: 627 HQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
H G + D LLP RG+E E+ Q P KI+ H
Sbjct: 653 HNEGLVNDYLLP--------VHWRGDEDPKLEY--------CEQRPSVVKISRH 690
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 181/425 (42%), Gaps = 77/425 (18%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVL 982
P C I P+ + F PSI+H++++ L+A L +L ++ + V+
Sbjct: 911 PARECSIDKLPLEYTMFS--LLCPSIIHKVETFLIAEELNKTILSPVGFTDLNL----VI 964
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
A+ +E + + +E LGDS LK+ S QL HEGLLS K+ ++SN L
Sbjct: 965 TALCAPDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSY 1024
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N E D R+++ +KT+ADV
Sbjct: 1025 AAIETGLDKFIFMDIFTGVKW-RPRYNKAHVEEQD-----------IPRREMSTKTLADV 1072
Query: 1103 VEALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV------- 1151
+EAL+GA GG E IFL I +P+ +F + V
Sbjct: 1073 IEALLGAATIDGGRTKVEKCLKIFLPEIRW------MPFADRFDALYNSVPEVYENLPSS 1126
Query: 1152 --RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
R +ESL+ Y F L +A TH S P YQRLEFLGD++LD++I +++N
Sbjct: 1127 WFRDIESLVGYIFNKKVFLAQAFTHPSN--PGSTMSYQRLEFLGDSILDHIIVDHIFNSP 1184
Query: 1210 PGLSPGYLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHI 1243
+ MR++ N D A +++ K L +++
Sbjct: 1185 RNFQHVDMHLMRASLANADFLAFLCIGMTTEEERGEIVEASRNGTFTRMTTRKISLWQYM 1244
Query: 1244 LHA-SHELYKRINITVDSFEKLSLGSTFGWESVTSFPKAL----------GDIIESLAGA 1292
H S EL TV+ ++ L T ++P AL D+IES+ GA
Sbjct: 1245 RHGTSWELTVSQQQTVNQYQALKADITKALYESDTYPWALLSRLRAQKFFSDLIESVLGA 1304
Query: 1293 IFVDS 1297
IF+DS
Sbjct: 1305 IFIDS 1309
>gi|115387529|ref|XP_001211270.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195354|gb|EAU37054.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1344
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 179/631 (28%), Positives = 293/631 (46%), Gaps = 85/631 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS---PFVAVFLVPK 77
R YQ+E E A QNTI L+TGSGKTLIA++LL+ L+ + + P ++ FLV
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA ++ + D V ++G MGVD W+ TW E K+ V+V T +IL L +
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
Y + I +L+ DE HH + H YA I+ + Y L S+ PRIFGMTASP+ +K
Sbjct: 230 YITMQQINLLVFDEAHHTKKDHPYARIIRDSY---LRVPPSSRPRIFGMTASPVDTK--- 283
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
D + +LE L++SK+ T + ++L + + + + YD++ T +D
Sbjct: 284 --GDVLEAARNLEALLDSKIATTSKLTILRQVV--NRPNEEVWIYDKLQP---TFTSDLY 336
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
++E + ++ E R S++ + +C VW++ A + + E
Sbjct: 337 KLMESR----FGDISHLEPMFRFARHATSELGT---WCADR--VWVSALADDVLPKVEGS 387
Query: 318 FFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG---LLTEKIVC 374
Q G G+ + K D +T + +E +S D G L+ K+
Sbjct: 388 IGGKRQSTGLGQ-LPKDVHRD-----ITRIKEASELV---ESHPPNDPGAPEALSSKVRV 438
Query: 375 LIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNS----G 428
L + + + G E + +CI+F E+ TA VL L + L +P + + G S G
Sbjct: 439 LWKEISQCFGQETNTKCIVFTEKRYTAKVLFDLFTVLNVP---GLRPGVLIGVRSSDRIG 495
Query: 429 IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR 488
+ R++ +V FR G +N + AT++ EEGLD+ CNLV+ S I+
Sbjct: 496 MNVTFRQQILTMV-RFRTGEINCLFATAVAEEGLDIPDCNLVV---------SMIEK--- 542
Query: 489 ARMQNSDY---LLMVKSGDSTTQSRL----ENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
N+D+ L+ V + QS E+ + GN + + L+ +
Sbjct: 543 ---DNADHESILVQVNDAEKIMQSFCQLLPEDRILHGNDDDTDAV---------LDREEW 590
Query: 542 GEDFYHVESTGTIATLSSSVSLIYFYCSRL--PSDGYFKPTPKFHINKEMGICTLYLPNN 599
E+ Y + ST T S+++++ Y S L +D + T + +C + LP
Sbjct: 591 -EEPYTLPSTAARLTHHSAITVLARYASSLQYENDTSAQVTYVVLPVNDAYVCEVILPEK 649
Query: 600 CPIQTVIAQGNIK--TLKQAACLEACKKLHQ 628
PI+ +K T K+ A EAC+ L +
Sbjct: 650 SPIRGATGMPAMKKSTAKRYAAFEACRLLRK 680
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E LE LGD FLK A S LF + +++E V + +I N L +++L FIR+
Sbjct: 1046 ERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSR 1105
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGR----KIYVTGRKKVKSKTVADVVEALIGAFLS 1112
F W G +L GR KI + + KT+ADV EALIGA L
Sbjct: 1106 GFSRDTWYPEGL----------TLLQGRDHSKKIGSESKHALAEKTIADVCEALIGAALL 1155
Query: 1113 TGGE----NVGLIFLDRIGIK-----------VDFVNVP-YQRQFQVHAERLVNVRHLES 1156
T G ++G+ + + + ++P YQ Q +E + R +E
Sbjct: 1156 TPGPQHRFDMGVRAVSAVVDSNEHNAASWRDYISLYSIPKYQEQAPDGSE-IDLCRRVEE 1214
Query: 1157 LLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
L Y FR P LL A TH SY +P CYQ LEFLGDA+LD + L+ ++P P
Sbjct: 1215 KLGYHFRYPRLLHSAFTHPSYPSAWARVP-CYQSLEFLGDALLDMVCVEDLFRRFPDRDP 1273
Query: 1215 GYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
+LT+ + A V+N +VK GLH H+ + S L +I
Sbjct: 1274 QWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQI 1313
>gi|342872111|gb|EGU74508.1| hypothetical protein FOXB_14953 [Fusarium oxysporum Fo5176]
Length = 1500
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 182/647 (28%), Positives = 286/647 (44%), Gaps = 68/647 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY------AYLLRKPSPFVAVFLVP 76
R YQ+E E A ++N +V L TG+GKTLI+ +LLR + A + K VA FLV
Sbjct: 82 REYQIELFERAKERNLLVVLPTGTGKTLISALLLRHHLEQELEARAIGKLKK-VAFFLVE 140
Query: 77 KVVLVPQQAEAIKMHTDLK-VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
KV L QQ + + V K+ G M W E+ ++ V+V T QILLD L
Sbjct: 141 KVALCVQQHAVLSCNLGAHPVTKFVGHMKGMTKTKEYWDEKFGENMVVVCTAQILLDCLT 200
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
+ ++ I +LI DE HH + KH YA IM +Y + + PRI GMTASP+ ++
Sbjct: 201 CGFITMSRINLLIFDEAHHTKKKHPYARIMDGYYCK----HEGEKPRILGMTASPVDART 256
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF-IPFSTAKFKFYKYDEIPHALYTHLA 254
+D +LE ++S++ T + E ++ T + Y E P THL
Sbjct: 257 ----KDVRDTALELERSLDSQIATISDEVLMETMHRKKQTEETVNYSRLEAPDDTKTHLW 312
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE-TISC 313
+++ + ++ + L+ K+ S + LG W A + E ++
Sbjct: 313 EQIFALVSRNEQFKLTLEFT--------KEASSV----------LGTWCADRYWELAMTD 354
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQAL--VTYVPSGAEWSIGDDSKFNLDSGLLTEK 371
E++ A F I A++A+ V + ++ D L + K
Sbjct: 355 LETERLAARTSREFIGDIAVTRADLATEAVRRVQEIVQAHKFGAIDPKAEGLSA-----K 409
Query: 372 IVCLIESLLEYRGVEDI-RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNS 427
+ L E L ++ RCI+FVE+ TA +L L S+ R Y+ G NS
Sbjct: 410 VKSLHEILSHAFTMDGTKRCIVFVEKRYTARLLSDLYSQPSMRIPGMSASYMVGCQSTNS 469
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
S ++Q + EF+RG N + T + EEG+DV C+LVI FD +V ++QS+G
Sbjct: 470 SFGTMSFREQVLALHEFKRGNTNCLFTTPVAEEGIDVPDCDLVIRFDLYNSVIQYLQSKG 529
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP---LNNHMYGED 544
RAR S Y+ M++ G+ T + L + K LP S L++ + ED
Sbjct: 530 RARQARSRYITMMEEGNLTHIRSAKQALRDSQALEK-----FCLPLSADRKLHDDLIDED 584
Query: 545 F-----------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICT 593
Y + STG T +S+ ++ + S L + Y K + + +
Sbjct: 585 MEMMVERMQHQVYEIPSTGARLTFPASLEILARFVSHLSTGSYAKVEYQVQKVGDRYLAD 644
Query: 594 LYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLLP 638
+ +P P+ V L K +A EACK L + + NL P
Sbjct: 645 VVMPLQSPVNFVKGTQQRSKLLAKCSAAFEACKILIRDKHVDGNLQP 691
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 203/457 (44%), Gaps = 74/457 (16%)
Query: 928 CRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
C II+ P+ +S + F P+I+HR+ S+L+ ++ N+L ++ IP
Sbjct: 964 CFIILEPLHVSPLPIDVVSMAMAF-PAIIHRIDSVLIVLDACNLL------DLEIPPELA 1016
Query: 982 LEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
LEA+T H E LE LGD FLK A + ++ + +E
Sbjct: 1017 LEAMTKDSDNSGEHDTEQINFQTGMGDNYERLEFLGDCFLKMATTISIYTLMPDGNECKY 1076
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIY 1087
V++ +I N L ++KL F+R+++FD + W D L G+
Sbjct: 1077 HVERMLLICNQNLFNHAVDRKLQEFVRSKAFDRRTW-----------YPDLPLKKGKAPK 1125
Query: 1088 VTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFL----------DRIGIKVDFVN-- 1134
+ + + KT+ADV EALIGA +L++ N+ L R+ D+
Sbjct: 1126 TSMKHNLADKTIADVCEALIGAAYLTSKASNMDLAVKAVTRMTKSKNHRMKAFKDYYKAY 1185
Query: 1135 -VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLG 1193
VP ++ A + V+ + Y F+ L+ A H S+ +P YQRLEFLG
Sbjct: 1186 KVPEWQEGNASASQRSLVQKVAQATGYRFKSAQLVQSAFKHPSWPYESVPD-YQRLEFLG 1244
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
D++LD I YLY +P P +LT+ + A V+N VK GLH+H+L ++ L +
Sbjct: 1245 DSLLDMAIVDYLYQNFPRADPQWLTEHKMAMVSNQFLECLCVKLGLHQHLLSSTSSLLSQ 1304
Query: 1254 INITVDSF---------EKLSLGSTFG---WESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
I V E +G+ W V S PK D+IE+L GA+FVDS
Sbjct: 1305 IRDYVVELEVAEENAHKEAKEVGTPMRKDFWLKVGSAPKVYADVIEALVGAMFVDSKYKF 1364
Query: 1302 EVVFQSIRPLLEPMITPETMRF-------HPVRELTE 1331
VV ++P + MR HPV L++
Sbjct: 1365 SVVENFFTKFIQPYF--QDMRLYDTFANKHPVTFLSK 1399
>gi|295673975|ref|XP_002797533.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280183|gb|EEH35749.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1450
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 191/681 (28%), Positives = 329/681 (48%), Gaps = 104/681 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL-----LRK--PSPFVAVFLV 75
R YQLE LE +LK+N I+ ++TGSGKT IAI+ +R +RK FV FL
Sbjct: 31 RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCTEDKVRKFGLKEFVW-FLA 89
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYW-GDMGVDFWD-GATWKEEMSKHEVLVMTPQILLDG 133
P V L QQ + I + + G V +W W + + ++V TPQILLD
Sbjct: 90 PTVALADQQHKIISQQLSVYQTRLLLGSDKVHYWSTKKIWDDILLNIRIVVSTPQILLDA 149
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-TG-DSNLPRIFGMTASPI 191
L + ++ I +L+ DE HH G IM FYH L+ TG ++LP I G+TASP
Sbjct: 150 LSHGFVTMSRISLLVFDEAHHCDGFSPANTIMQRFYHEQLQRTGTKTDLPHILGLTASP- 208
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCA-SESVLSNFI---PFSTAKFKFYKYDEIPH 247
V+ ++ + +K+ E +N++ T L ++ T KF+ D + H
Sbjct: 209 ---VTRADPESLKKV---EKNLNARCETPRIHREELMRYVHRPELYTVKFR---TDSLIH 259
Query: 248 A-LYTHLADELAMIELKHTRSLENLDLNE---AQAELI-----RK-----KVSKINSTLL 293
+ + +L+ + ++++ ++ L E +Q +L+ RK ++SK+ +
Sbjct: 260 SDMLQNLSRIIGTVDIEKDPWIKRLRRQEDRRSQEKLLHALEKRKTHCLSQLSKLLRQAI 319
Query: 294 YCLSELGVWLALK-AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQAL--VTYVPSG 350
+LG W A +E I E+ ++Q++ F ++ ++ + S+ L ++ P
Sbjct: 320 SVHDDLGPWAADAFISEVIERLETKRGMYQQVE-FHSSLDREEEAFISEVLSELSISPVK 378
Query: 351 AEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL 410
+W + +S +++ K+ L+E LLE D IIF ++ T ++LS L
Sbjct: 379 QDW--------DSESNVVSTKVNLLVE-LLESEHTADFTGIIFAQQRATV----TMLSHL 425
Query: 411 LPRHCTWKTKYIAGNNSGIQC-----------QSRKKQNEIVEEFRRGLVNVIVATSILE 459
+ +H K ++G G C + Q +++ R G N+++ATS+LE
Sbjct: 426 ISKHPRLKDIIVSGAFLGDACYASRTSTITEVHDTRSQKGSIDDLRSGKKNLLIATSVLE 485
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ---SRLENYLA 516
EG+DV +C+LV+ FD + + SFIQ RGRAR ++S +++ + S + + + +RLE+ +
Sbjct: 486 EGIDVSACHLVVCFDAIKNLRSFIQRRGRARKEHSKFVMFLDSDNISEEKQWTRLEDVMK 545
Query: 517 S--GNKMRKEVLSHASLPCSPLNNHMY-------GEDFYHVESTGTIATLSSSVSLIYFY 567
S + MR+ L ++M G+ + +ESTG + TL ++ + +
Sbjct: 546 SIYEDDMRR------------LEDNMARENIVEEGDQYLRIESTGALLTLENARQHLEHF 593
Query: 568 CSRLP---SDGYFKPTPKFHINKEMGICT--LYLPNNCPIQTVIAQGN--IKTLKQA--- 617
C+ L +D +P FH +KE G+ + LPN + + G+ KT + A
Sbjct: 594 CATLHYAFTDS--RPHFIFHESKEDGMVAAKVILPNVLDPKFRVIHGSKRWKTERMAQRD 651
Query: 618 ACLEACKKLHQIGALTDNLLP 638
A +A KL+ G + D LLP
Sbjct: 652 AAFQAYLKLYNEGLVNDYLLP 672
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 70/459 (15%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKV 981
P C I P+ + F + PSI+H++++ L+A L +L ++ + V
Sbjct: 918 FPARDCSIDKLPLEYTMFALLS--PSIIHKVETYLIAEELNKTILSPVGFTDLNL----V 971
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
+ A+ +E + + +E LGDS LK+ S QL HEGLLS K+ ++SN L
Sbjct: 972 ITALCAPDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLS 1031
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
E L FI + F W P N + D R+++ +KT+AD
Sbjct: 1032 YAAIETGLDKFIFVDIFTGVKW-RPLYNKAHVKEQD-----------IPRREMSTKTLAD 1079
Query: 1102 VVEALIGAFLSTGG----ENVGLIFLDRIGIK--VDFVNVPYQRQFQVHAERLVN-VRHL 1154
V+EAL+GA GG E IFL I D +N Y +V+ + R +
Sbjct: 1080 VIEALLGAATIDGGQIKVEKCLKIFLPEIRWIPFADRLNALYNSVPEVYENLPTSWFRDI 1139
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN---KYPG 1211
ESL+ Y+F L +A TH S P YQRLEFLGD++LD++I +L+N +P
Sbjct: 1140 ESLVGYTFNKKVFLAQAFTHPSN--PGSTMSYQRLEFLGDSILDHIIVDHLFNSPRNFPH 1197
Query: 1212 ------------------LSPGYLTD-----MRSASVNNDCYALSSVKHGLHKHILHA-S 1247
L G TD + AS N +++ K L +++ H S
Sbjct: 1198 VDMHLMRASLANADFLAFLCIGMTTDEERGEIVEASRNGTFTRMTTRKISLWQYMRHGTS 1257
Query: 1248 HELYKRINITVDSFEKLSLGSTFGWESVTSFPKAL----------GDIIESLAGAIFVDS 1297
EL TV+ ++ L T ++P AL D+IES+ GAIF+DS
Sbjct: 1258 WELTVSQQQTVNQYQALKADITKALYEADTYPWALLSRLRAQKFFSDLIESVLGAIFIDS 1317
Query: 1298 -----GCNREVVFQSIRPLLEPMITPETMRFHPVRELTE 1331
C + + L ++ E HP + L E
Sbjct: 1318 HGSLDACTAFLERIGLMNFLRRILQAEIDIMHPKQRLGE 1356
>gi|358397707|gb|EHK47075.1| hypothetical protein TRIATDRAFT_291296 [Trichoderma atroviride IMI
206040]
Length = 1507
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 181/668 (27%), Positives = 299/668 (44%), Gaps = 87/668 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQLE LE +L+QN IV ++TGSGKT +A+ LR A L R + F+ P V L
Sbjct: 124 SRAYQLEMLEQSLRQNVIVAMDTGSGKTQVAV--LRIKAELERCDPKKIVWFITPTVHLS 181
Query: 82 PQQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ +K+ + + G+ + W W ++K V++ TPQILLD L +Y K
Sbjct: 182 AQQHTVLKLQIPSVPMQMLAGNRHLPTWTQEMWTPLLAKTRVVITTPQILLDALDHAYLK 241
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ + +++ DE H+ GK+ IM YH L G S +P I G+TA+P + S
Sbjct: 242 MEHLALIVFDEVHNCVGKYPGGKIMQHHYHPCLSAGKS-VPAILGLTATP---SIQSEAT 297
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI 260
D + LE LM+++ C S ++ + + K K I H Y A+E +
Sbjct: 298 D----LVALEQLMDAR---CISPTLHRDEL------LKCVKRPSIQHKAYIP-AEEYSTP 343
Query: 261 ELKH-TRSLENLDLNEAQ-AELIRKKVSKINSTLL---------YCLSELGVWLALKAA- 308
+K +R +LD+N+ + +R+ +++ N LL Y ++ + + +
Sbjct: 344 TMKSLSRVYSDLDINKDPFVQSLRENLTERNGRLLEKTILKEDTYTQIQMKTFKSQSQSI 403
Query: 309 -ETISCYESDFFAWEQLDGF------GETII----------KKFGSDASQALVTYVPSGA 351
+ + + +D F W+ + + G+ KK+ + + + P A
Sbjct: 404 CKQLGPWAADLFIWKSISSYLDKAEYGDEFFDQWYQCRDREKKYLAGIFRRVEVEPPPKA 463
Query: 352 EWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL 411
+ D S D L+ + + I+ + IIFVE V+ +L+E+L
Sbjct: 464 PQGLNDIS----DKVLVLLEELLSIDE-------QSTMGIIFVEER----VMVKMLAEIL 508
Query: 412 PRHCTWKTKYIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVIVATSILEEG 461
+ K KY G G S K++ + ++ FR G +N+++AT++LEEG
Sbjct: 509 SINPAIKKKYRVGTMVGSSSYSSKRRVVYDFGDKGDLKALQNFRSGKINLLIATAVLEEG 568
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+DV +CNLVI FD +T SFIQ RGRARM++S +L GD++++ E
Sbjct: 569 IDVPACNLVICFDVPKTSKSFIQRRGRARMKDSRLVLFFDEGDASSKKWEEKEDEMARLF 628
Query: 522 RKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
E L + + G Y TG ++ + +C L + P
Sbjct: 629 EDEQREIQQLEMIEESESL-GTICYTHPVTGARLDFDNAKPHLEHFCRTLSPTEFVDSRP 687
Query: 582 KFHINKEMGI------CTLYLPNNCPI-----QTVIAQGNIKTLKQAACLEACKKLHQIG 630
+ I+KE G+ T+ LP P+ + + K + A +A L+ G
Sbjct: 688 DYIIHKEDGVGSNALTATVLLPPFIPVNPRQYNSASVWRSEKNATKDAAFQAYMALNDAG 747
Query: 631 ALTDNLLP 638
L DNLLP
Sbjct: 748 LLNDNLLP 755
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 237/537 (44%), Gaps = 86/537 (16%)
Query: 858 NANSLFTRNN-----GSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK 912
N NS +T + S+T + + YG + ++ P L ++ ++L + +
Sbjct: 919 NTNSPYTYKDIIECKPSITLVQNAF---YGFEKAPEKGPYLVLKKWTRRTDFLHRLQGNP 975
Query: 913 QKEPSK---ISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH 969
+KE + S P E + P + + F +P+I+H L +L+A L +L
Sbjct: 976 EKEQASSRPYSRVYPMEWAIVDTVPATHAMF--GMIIPTIIHELGVMLMAKELATTVL-- 1031
Query: 970 CMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
+ V I V EAI + E + E LE LGDS LK Q T + EG LS
Sbjct: 1032 --EPVGISDWGLVREAICARSANEPMNYERLEFLGDSILKLCTCIQAAVTKPDWPEGYLS 1089
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYV 1088
++R+ISN L + + +LP F+ T+ F W L + +
Sbjct: 1090 YWRDRLISNVRLYQAAVDFRLPRFLVTKPFTGHKW---------RPLYLEDVLQEDVNAP 1140
Query: 1089 TGRKKVKSKTVADVVEALIGAFLSTGG----ENVGLIFLDRI-------GIKVDFVNVPY 1137
T +++ +KT+ADVVEALIGA GG E +FL I G ++ F VP
Sbjct: 1141 TTERRLSTKTLADVVEALIGASYCEGGIAMAEKCIAMFLSEIDWDGIDKGREILFNRVPP 1200
Query: 1138 QRQFQVHAERLVNV-RHLESLLNYSFRDPSLLVEALTHGSYMLPEI----PRCYQRLEFL 1192
ERL + LE LL Y+F+ +LL EALTH S+M + R +R+EFL
Sbjct: 1201 N-------ERLPPILEPLERLLGYTFQRKALLTEALTHASFMADGVMDHGKRSLERMEFL 1253
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL------------- 1239
GDAVLD++I ++ P L + +++ VN D A +++HGL
Sbjct: 1254 GDAVLDHVIVTRIFEVRPELPHYTMHTLKTGLVNGDFLAFMTMEHGLKSMETVVTEEGSV 1313
Query: 1240 -----HKHIL----HASHEL--------YKRINITVDSFEKLSLGSTFGWESVTSF-PKA 1281
H ++ HA++ + + + + + + G+ + W + + PK
Sbjct: 1314 ENQETHTYLWQFMRHAANSIGIEQLATATRHAALRAEILDVMENGAHYPWALLAALNPKK 1373
Query: 1282 L-GDIIESLAGAIFVDSG---CNREVVFQ-SIRPLLEPMITPETMRFHPVRELTEYC 1333
D+ E++ GA++VDSG R V Q + LE ++ + HP +L ++
Sbjct: 1374 FYSDLFEAVLGAVWVDSGSIEACRAVCAQFGLMKYLERLLRDKVHVQHPKEQLGKWA 1430
>gi|452988240|gb|EME87995.1| hypothetical protein MYCFIDRAFT_104430, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1360
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 179/667 (26%), Positives = 297/667 (44%), Gaps = 80/667 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ E LE ++++N IV ++TGSGKT IA+ +R L + V FL P L
Sbjct: 4 RSYQTEMLEASVQKNIIVAMDTGSGKTHIALARIRVE---LERNDKLV-WFLTPSKTLAE 59
Query: 83 QQAEAI---------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
QQ + + ++ T W D G+ W ++ ++V TP ILLD
Sbjct: 60 QQHQVLSAELSGYGTRLLTGADACDKWSDQGL-------WTAALTNVRLVVATPAILLDA 112
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L ++ + + + + DE HH KH IM FY E G+S +P I G++ASP
Sbjct: 113 LTHAFMHMTRLALCVFDEAHHCTKKHPMNSIMQLFYRPARERGES-VPHILGLSASPHLP 171
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFIPFSTAKFKFYKYDEIPHALYTH 252
+ +++ D+ ++ +E+ +N+ T L F+ + Y AL
Sbjct: 172 EAAAA--DHVRRT--IESNLNAITVTPKQHRRELDTFVHPPDVQNIVYTAPS-GGALPGR 226
Query: 253 LADELAMIELKHTRSLEN--LDLNEAQAELIRKKVSK-INSTLLYCLSELGVWLALKAA- 308
L+ LA + + S + L+L E E RK++ K + YCL +L L ++A
Sbjct: 227 LSTALAYLTRTYDLSTDPYVLELTEQDDERSRKQLQKTMMKRKTYCLDQLRA-LDIRAGF 285
Query: 309 --ETISCYESDFFAWEQLDGFGETIIKK------FGSDASQALVTYVPSGAEWSIGDDSK 360
E + +D++ + F ++ + Q L E +
Sbjct: 286 LLEQLGASMADWYVAACIRRFRAGLMSECIVLPDLSEKERQHLARIFDRIRELAPATPDT 345
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
D +T K L+E LL++ +R IIFVE+ + L L L + ++
Sbjct: 346 NGSD---ITAKATELLELLLKH-ADPSLRGIIFVEQRVLVTALAEWLRGLPQLNDQYQIA 401
Query: 421 YIAGNNSGIQCQ-------SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
G ++ + + + Q +E FRRG N++VAT++LEEG+D+ +CNLVI F
Sbjct: 402 AFVGTSTSTNRKISVADLVTLQDQARDLEAFRRGEKNLMVATNVLEEGIDISACNLVICF 461
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC 533
DP + + SF+Q RGRAR Q+S Y + K+ D + L + M++ C
Sbjct: 462 DPPQNLVSFVQRRGRARQQHSKYFIFTKANDIGKAKQPWTLLEAA--MKELYSDDTRQVC 519
Query: 534 SPLNNHMYGED--FYHVESTGTIATLSSSVSLIYFYCSRLPSD--GYFKPTPKFHINKE- 588
L +H ++ Y V+ST + TL ++ S +Y +CS S+ GY P+F +++
Sbjct: 520 EALESHDLDKESRIYQVQSTQALLTLDNAKSHLYHFCSVCISNAAGYVDLRPEFDTSQDQ 579
Query: 589 ---MGICTLYLPNNCPIQTVIAQGNIKTLKQA------------ACLEACKKLHQIGALT 633
+ T+ LP ++++ + A A EA LHQ G +
Sbjct: 580 ETHLWTATVDLP-------AFVHPDLRSARSAESWSREELAIKDAAFEAYVALHQAGLIN 632
Query: 634 DNLLPDI 640
DNLLP +
Sbjct: 633 DNLLPPL 639
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 183/421 (43%), Gaps = 72/421 (17%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK-NMLLDHCMQNVTIPTIKV 981
+P C I P + F +F VPS++HRL L A L+ L D ++N T+ +
Sbjct: 860 VPASECTIERMPARYALFAAF--VPSMLHRLDLALTAAILQAGTLGDIDVKNTTL----I 913
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L+A+ + E LE LGD LK+ A Q+ + EG L++++++I+ N+ L
Sbjct: 914 LDALCSPSAGEPADYNRLEYLGDQILKHCAEVQVMAQHLKRPEGSLTLQRDKIVRNSTLA 973
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
K + L FI T+ F W P F+ G++++ +KT+AD
Sbjct: 974 KAALQAGLDEFIITKPFTGAKWRPPS-------------FSKTSGLDCGKREISTKTLAD 1020
Query: 1102 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV---PYQRQFQV------HAERLVNVR 1152
VVE+L+GA GG GL IK+ N P F + A +
Sbjct: 1021 VVESLVGAAYLDGGLAKGLQC-----IKILLPNEIWHPLPHCFNLLLSDLGPAASHDGLS 1075
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPR-CYQRLEFLGDAVLDYLITVYLYNKYPG 1211
LE ++ + F LL++A+TH P + Y+RLEFLGD+VLD +IT +L+
Sbjct: 1076 FLERMIGHEFEHKQLLMQAITH--VTCPYKGQLSYERLEFLGDSVLDLVITPHLFAHKRL 1133
Query: 1212 LSPGYLTDMRSASVN--------------NDCYALSSVKHGLHKHI-----------LHA 1246
L L A VN D + +V G ++ + L A
Sbjct: 1134 LRHWELHQAHEALVNKYFLGYCCMNYAIEQDENDIVAVADGSYRAMPKLRKVHLYDFLRA 1193
Query: 1247 SHELYKRINITVDSF--------EKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVD 1296
+ + V F E+L G+ + W + + PK DIIES+ GA+++D
Sbjct: 1194 DSQTAQMRRTAVAKFDAMVPEIAERLQGGTEYPWPELVTLSPPKFFSDIIESVLGALYID 1253
Query: 1297 S 1297
S
Sbjct: 1254 S 1254
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
+L + ++ +L+++AL S P Y RLE+LGD +L + V + ++ G
Sbjct: 901 TLGDIDVKNTTLILDALCSPSAGEPAD---YNRLEYLGDQILKHCAEVQVMAQHLKRPEG 957
Query: 1216 YLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV 1275
LT R V N A ++++ GL + I+ + SF K S G G +
Sbjct: 958 SLTLQRDKIVRNSTLAKAALQAGLDEFIITKP---FTGAKWRPPSFSKTS-GLDCGKREI 1013
Query: 1276 TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
++ K L D++ESL GA ++D G + + Q I+ LL I +HP+
Sbjct: 1014 ST--KTLADVVESLVGAAYLDGGLAKGL--QCIKILLPNEI------WHPL 1054
>gi|392585234|gb|EIW74574.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1534
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 207/728 (28%), Positives = 323/728 (44%), Gaps = 122/728 (16%)
Query: 8 SDTTEEVSADTLPF-ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
SD +E A P R+YQLE +L++N IV +TGSGKTLIAI LR + R+P
Sbjct: 18 SDHGDETPAPRTPVVTRDYQLEMFTASLRENIIVAQDTGSGKTLIAI--LRMKHEVEREP 75
Query: 67 SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVM 125
V F P V L QQ + I + + VG G + + W D A W+ + +H ++V
Sbjct: 76 RK-VCWFFAPTVALCEQQRDVIALDIPVSVGLISGALEPNQWKDIALWRGVLQRHRIIVS 134
Query: 126 TPQILLDGLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLL--ETGDSN--- 179
TPQ+LLD LR Y KL I +L+ DE HHA H Y CIM EFY R+ E G ++
Sbjct: 135 TPQVLLDALRHGYVKLGEDIGLLVFDEAHHAVDNHPYNCIMKEFYFRVAVREHGAASGAE 194
Query: 180 ----LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSK----------VYTCASESV 225
P + G+TASP+ + ++ +L+ ++ S V+ + V
Sbjct: 195 SREERPMVLGLTASPVYGGNVEASMRILER--NLDCIVRSPRLHRSQLISFVHRPIFKHV 252
Query: 226 LSNFIPFSTAKFKFYKYDEIPHALYT-HLADELAMIEL------KHTRSLENLDLNEAQA 278
L PF + + L T ++ D+ +I L K S + + ++ +
Sbjct: 253 LYRPAPFFDKTYTASNITALSSVLATLNVKDDPYIISLRGQLAHKTPGSPDYMRTDQKLS 312
Query: 279 ELIRKK-------VSKINSTLLYCLSELGVWLA--------LKAAETISCYESDFFAWEQ 323
+ I+K+ + I ST +LG W A A E YES F + ++
Sbjct: 313 KTIKKEDTYTHRGLKDIVSTATEICFDLGRWAADWYVHKAISLARENPMPYESAFTSVQE 372
Query: 324 LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL-EY 382
+ + + + + + +Y P+ E + D K+ LI++LL E
Sbjct: 373 KE---KAYLLRILARVHVSPPSYDPAAIEAGVSD-------------KLCVLIDTLLAEK 416
Query: 383 RGVED-----IRCIIFVERVITAIVLQSLLSELLPRHC-TWKTKYIAGNNSGIQCQS--- 433
RG E+ ++FV R + L +L+ + PR + I G + ++
Sbjct: 417 RGAEEEANEAYSGLVFVTRRDAVLSLAEVLA-VHPRTAGVLRVGRIVGTSESAYRKTLLD 475
Query: 434 ------RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
R E + FR G NV+VATS+ EEGLD+Q+C V+ +D + S+ QSRG
Sbjct: 476 VTRALMRNTHGETLGSFRTGEFNVLVATSVAEEGLDIQACCNVVRWDVPNNMVSWAQSRG 535
Query: 488 RARMQNSDYLLMVKSG--DSTTQSR---LENYLAS--GNKMRKEVLSHASLPCSPLNNHM 540
RAR S ++LM +SG D+ R LE + N+MR L+ +LP +
Sbjct: 536 RARRWRSTFVLMFESGNMDAAGVERWMQLERQMVEQYNNQMR---LAGNALPRYDEEDDE 592
Query: 541 YGEDFYH-----VESTGTIATLSSSVSLIYFYCSRLPS------------------DGYF 577
ED H VESTG + TL S+ + +CS LP+ +G+
Sbjct: 593 DQEDDDHAVRFTVESTGALLTLQSAPPHLNHFCSVLPNSRHTAHRALYDIDPPEFPEGWH 652
Query: 578 KPTPKFHINKEMGI--CTLYLPNNCP--IQTV-IAQGNIKTL--KQAACLEACKKLHQIG 630
P+ + G CT+ LP P ++T + Q L ++ +A K L+ G
Sbjct: 653 ALDPRTNTLPYPGPFGCTVTLPRVLPPLLRTFSVPQKYSSKLSARRHVSFKAYKTLYDAG 712
Query: 631 ALTDNLLP 638
L ++L+P
Sbjct: 713 LLNEHLMP 720
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 240/550 (43%), Gaps = 88/550 (16%)
Query: 903 NYLSKCRQQKQKEPSKISFELPPELCRI-IMAPISLSTFYSFTFVPSIMHRLQSLLLAVN 961
N+L ++ ++ K L PE + +++P+ VPSI+ + A +
Sbjct: 963 NFLHPAEKRSRRSSEKARKLLIPEYSFVELVSPVEAEFAL---LVPSILRYISVANTAAS 1019
Query: 962 LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
L+ LL Q IP V AI+ QE + + LE+LGD+ LK L+ +
Sbjct: 1020 LRATLLTDP-QLAEIPLSLVKMAISAPVSQEPTNYQRLESLGDAVLKLVVGAYLYSEHPL 1078
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIP--GDNSGSY--ELND 1077
HEG L+ +++ +SN L K ++KL +I + F PK ++ DN G+ E N
Sbjct: 1079 WHEGYLTQRRDHAVSNVRLAKSAIQKKLYRWIVRDHFAPKRFMPRYLTDNRGATNEEENS 1138
Query: 1078 DSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY 1137
D NG+ G++ + +K +ADVVE+LIGA GG + + + I + + +
Sbjct: 1139 DENGNGK-----GKEDLSTKVLADVVESLIGAAYVHGGFELAISLIRTIDVHLALSPLSA 1193
Query: 1138 QRQFQVHA-----ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
+ A E V H+++++ Y+F P LLVEALTH S+ Y+RLEFL
Sbjct: 1194 SIEAAYAAADPSLEAPPQVAHVQNMIGYTFTKPLLLVEALTHASHQTDLRTVSYERLEFL 1253
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY-----------------ALSSV 1235
GDAVLD LI YLY SPG +T +R ++ N + A +
Sbjct: 1254 GDAVLDMLIADYLYKHPKNFSPGEIT-LRKHAIGNALFLSYACLSSCTPVDASVPAPDPL 1312
Query: 1236 KHG------------LHKHILHASHELYKRINITVDSF--------EKLSLGSTFGWESV 1275
+HG L++ +LH+S L F LS S F W +
Sbjct: 1313 RHGKITLRAKTEHIYLYQCMLHSSSALLDEQKGAFARFASVGGPLARSLSHSSVFPWAEL 1372
Query: 1276 TSF--PKALGDIIESLAGAIFVDSGCN----REVVFQ-SIRPLLEPMITPETMRFHPVRE 1328
T PK L DI+ES+ GA+++D+ + R V+ + + +LE + + HPV
Sbjct: 1373 TRLQAPKILSDIVESVIGAVYIDARGDVVAVRGVLGRMGMWTMLERVSDGDVEVEHPVST 1432
Query: 1329 LTEYCQKNHFSMKKPVASRI-------SGKAAVTVEVQ-----------------ANGRL 1364
L + + +P ++ GK TV ++ AN R
Sbjct: 1433 LHRWASQRKTEAGEPAPRKVVYEYEVERGKVVCTVRLEGVEELGSVAAECEKRGSANARR 1492
Query: 1365 FEHTFLDADK 1374
E +L A+K
Sbjct: 1493 NEAKYLAANK 1502
>gi|170591572|ref|XP_001900544.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158592156|gb|EDP30758.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 1856
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 249/520 (47%), Gaps = 67/520 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A K+N IV L TGSGKT IA++L++ Y L P A FLV KV
Sbjct: 16 RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTTKLVTPWKNGGKRAFFLVDKVS 75
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQA I+ HT L VGK G + D W + A + ++ HEV V+T QI LD L +
Sbjct: 76 LVEQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDTFIALHEVTVLTAQIFLDLLDHGF 135
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
F ++ V+I DECHH G KH Y IM HR + + + PRI G+TAS I SK+
Sbjct: 136 FNMSNAAVIIFDECHHVLGSKHPYRLIM----HRYGQLTEVDRPRILGLTASLISSKIPP 191
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE- 256
S ++ + LE +M+S + T S+ + S + +Y + H + +
Sbjct: 192 SNLEHL--LEKLERIMHSSIETA------SDLVSISKYGARPKEYVIMCHDFFCCTCETS 243
Query: 257 ---LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
++ +E T L+ + + RK V + S L +LG W C
Sbjct: 244 KKVISTLESLRTFCLKCTEFHPEFDVDPRKPVLEAVSRTKSVLEQLGPW----------C 293
Query: 314 YESDFFAWEQLDGFGETIIKKFGS-----------DASQALVTYVPSGAEWSIGDDSKFN 362
AW+ F + K+ G + + ++ + + + F+
Sbjct: 294 ------AWKLCQLFQRQLKKQSGQGFLPEKQIIFLQMAYTTMRFIKRLLDVKVANIRCFS 347
Query: 363 LDSGLLTEKIVCLIESL-------LEYRGVEDIRC-IIFVERVITAIVLQSLLSELLPRH 414
+L +++ L E L +E + C IIFVE+ A VL +L+ + R
Sbjct: 348 DVKPILPDRLARLFEILKFFSPSNMEKVDPDFTFCGIIFVEQRYVAYVLNTLI-RAISRW 406
Query: 415 CTWKTKY------IAGNNSGIQCQS----RKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
K Y I N++ I + K+Q ++ +FR+ +N+++ATS+LEEG+DV
Sbjct: 407 DNDKFGYLVSDFVIGYNSANIGTEETMALHKRQELVLRKFRQRHLNLLIATSVLEEGVDV 466
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
+ CN+VI FD +++QS+GRAR + Y L+V+ D
Sbjct: 467 RQCNVVIRFDRPTDYRAYVQSKGRARKDGASYFLLVEERD 506
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 172/340 (50%), Gaps = 48/340 (14%)
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYQ 1138
++ + K++AD VE+LIGA L G L F+ +G+KV F++ Q
Sbjct: 1514 QQSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTZPVQMEPPLLRFIDTTDQ 1573
Query: 1139 RQFQVHAERLVNVR----HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1194
+ + ++ LE + Y F D + L++A TH SY I CYQRLEFLGD
Sbjct: 1574 PDKSLRKLNDLWIQFQFSKLEDCIGYRFHDRAYLLQAFTHASYYKNRITGCYQRLEFLGD 1633
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVLDY+IT +L+ SPG LTD+RSA VNN +A +VK+ HKH + L+ I
Sbjct: 1634 AVLDYVITRFLFQHSAHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMI 1693
Query: 1255 ----------NITVDSF-EKLSLGST-----FGWESVTSFPKALGDIIESLAGAIFVDSG 1298
N++ +F E++ + +T G E PKA+GDI ES+AGAI++DSG
Sbjct: 1694 EKFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSG 1753
Query: 1299 CNREVVFQSIRPLLEPMIT------PETMRFHPVRELTEY-CQKNHFSMKKPVASRISGK 1351
+ V++ L++ I P + P+REL E ++ FS + + +GK
Sbjct: 1754 RSLNTVWRVFYNLMKETINECCSNPPRS----PIRELLEMEPERARFSKLERILE--TGK 1807
Query: 1352 AAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
VTV++Q R T + + AK A K L+ LR+
Sbjct: 1808 VRVTVDIQGKCRF---TGMGRSYRIAKCTAAKRALRYLRS 1844
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + LF T HEG LS + + +SN L
Sbjct: 1340 LLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEVSNCNL 1399
Query: 1041 CKLGCEQKLPGFIRTESFDPK-MWIIP 1066
+LG + LP I FDP W+ P
Sbjct: 1400 YRLGRKHNLPSLIIGSKFDPNDGWLPP 1426
>gi|426198231|gb|EKV48157.1| hypothetical protein AGABI2DRAFT_202619 [Agaricus bisporus var.
bisporus H97]
Length = 1179
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 257/1053 (24%), Positives = 427/1053 (40%), Gaps = 143/1053 (13%)
Query: 368 LTEKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWK----TKY- 421
++ K + L++ L ++ + D R IIFV++ I A +L +L+ +PR + T Y
Sbjct: 140 VSHKFILLVQQLEAHQILGDNFRGIIFVQKRIVAQLLVALIHISMPRLQFLRPISLTNYR 199
Query: 422 IAGNNSGIQCQ--------SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
+ ++ C + Q + ++F G N+++AT E+ + +VI+F
Sbjct: 200 VLSDSEAFVCDIFLTHVPVTYPLQERMTQQFVSGEYNLLIATKSFEDA-GLPKAPVVILF 258
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS--- 530
D + S +R A +Q + M++ G+S L +Y S + + E++ A+
Sbjct: 259 DVFESQISRAYTRRCASVQGGYLIHMLEQGNS-----LHHYALSHSALDPEMIRWATTLE 313
Query: 531 ---LPCSPLNNHMYGEDFYHVES-------------TGTIATLSSSVSLIYFYCSRLPSD 574
+P D Y+ +S TG + S + Y +R +
Sbjct: 314 NDYFNRAPPQPPQESNDPYNSDSEDDRDLEVIQDPITGHHIRKNQSTIAFHRYAARADAQ 373
Query: 575 GYFKPTPKFHINKEM---GICTLYLPNNCPIQTVIA-QGNIKTL-KQAACLEACKKLHQI 629
+ KF K C + L P+ V K L ++ AC AC +L
Sbjct: 374 TKCEDLFKFVSQKSTYSEWRCRINLAGT-PVDGVSGPAAPTKALARKEACYIACLRLQHF 432
Query: 630 GALTDNLLPDI---VVEKHDAQKRGNEPYNA---EHP-IYFPPELVNQSPQDTKITYHCY 682
G L VE HD +P++ E P I PE S + Y
Sbjct: 433 GLLDSAFFFRTRARKVESHDETFDCPDPHSGSIHERPHIPLTPEFWKNSILTSPSLRFLY 492
Query: 683 LIELKQHFNYDISARNIVLAMRTELESEIKKV-NFDLEVERGRLTVNLKHLGRIQLIPNQ 741
I + F + + T + + + F L + LT+ + + L +
Sbjct: 493 PIVVSIPFPVSSVCEKAPICILTR--APLPPIPQFQLSHDGDALTLQSQRYLPLSLDAGR 550
Query: 742 VLLCRRFQITLFRVIMDHNLDKLN---------EILDGFELRDNLEIDYLLLPSTGQLID 792
+ L +F I R+IM+ + L+ + ++ D+ E D + ID
Sbjct: 551 LDLIHKFTIRFCRMIMNKPFEALSYKNLGYMFAPLRKAWKPPDDEEYDL------SEDID 604
Query: 793 WKTVATV----LFPRDNGSKHNMNC-STMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQI 847
W+ V+ V P + ++ + R V + C + + G++
Sbjct: 605 WEMVSVVSENWAVPFGDLTQLRKEAEDALIQDRAVEFTNRYEILCIREDMTPTSVVEGKV 664
Query: 848 YCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQ-LCFDREPLLNGRRIFHVQNYLS 906
+ + + F R G T ++ Y R + L +P+L R+ NYL+
Sbjct: 665 SGLLFRMWRPHNGRYFFRQGGK-TLLEQCYSRRKNFEGLAHPNQPILEVMRMPAPTNYLN 723
Query: 907 KCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 966
Q + P+K + L PE CR + +S ST +PSI+ R+ LL L
Sbjct: 724 PPISQLEL-PAKTTQFLIPECCRRLT--VSASTLRMGYLLPSIIRRIDEFLLIKQLNAKN 780
Query: 967 LDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGL 1026
L+HC+++ + + A ++ D++ E LE LGD+ LKY ++ +F N EG
Sbjct: 781 LNHCVKDDLL-----IMATSSPLAGNDYNYERLELLGDALLKYLSTTYVFVQNLNGTEGE 835
Query: 1027 LSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG---------DNSGSYELND 1077
L ++R ISN LC + LPG+I+ + F+ K W+ PG G ++D
Sbjct: 836 LHTARQRFISNRQLCDIVSGWGLPGYIQLKPFNIKSWLPPGMTIDDRQKESTVGGGVVDD 895
Query: 1078 DSL------FNGRKIYVTGR-------------KKVKSKTVADVVEALIGAFLSTGGENV 1118
L N +I + R + +KTVADV EA+IGA +GG +
Sbjct: 896 GHLDMRPAQPNEDRIGASKRPKNKKRRLNKKTLSPIANKTVADVAEAIIGAAYISGGRDS 955
Query: 1119 GLIFLDRIGIK-------VDF---VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLL 1168
L + I DF + P R HA + +E++ + F+ PSLL
Sbjct: 956 ALKATKALMIPFADVEEWADFGRKASAP--RHDTGHAPEPSVMHFIETITGFRFQQPSLL 1013
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
LT S + + +QRLEFLGDAVLD+L+ YLY+K SPG L+ M+S V+N
Sbjct: 1014 RLTLTQNSMEMKD----HQRLEFLGDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNS 1069
Query: 1229 CYALSSVKHGLHK--HILHASHE--------LYKRINITVDSFEKLSLGSTFGWESVTSF 1278
A V GLH+ H+ + L R S K + T+ W +
Sbjct: 1070 ILAAICVWSGLHRFVHVRQQQKQVVWDYEKALRGREAAETASTSKEAARVTYFWMDL-DV 1128
Query: 1279 PKALGDIIESLAGAIFVD---SGCNREVVFQSI 1308
PK L D+IES+ GA ++ S EV+F +
Sbjct: 1129 PKVLSDVIESIIGAAYISDDFSQAGVEVIFDQM 1161
>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
Length = 1399
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 185/673 (27%), Positives = 293/673 (43%), Gaps = 86/673 (12%)
Query: 20 PFA-RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKV 78
PF R+YQ E +E +++ N I ++TGSGKT IAI R+ + R + FL P V
Sbjct: 8 PFRLRSYQAEMVEESMQSNIICVMDTGSGKTHIAIDRTRAELEICRPDK--IVWFLAPTV 65
Query: 79 VLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRL 136
L QQ K + + G +D W D W + + +++ T Q+LLD L
Sbjct: 66 TLCEQQFAVFKSNLPGYGIQLLSGKDNLDHWTDQGVWDDVLLNIRIVLSTHQVLLDALSH 125
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ K+ + +LI DE HH KH IM++FY + T LPRI G++ASPIK+
Sbjct: 126 GFVKMRNLSLLIFDEAHHCSLKHPAHRIMSDFYKPRIGT---ELPRILGLSASPIKTAKV 182
Query: 197 SSEQDYWQ------------KIHDLETL-------MNSKVYTCASESVLSNFIPFSTAKF 237
+SE D Q K+H E L + Y + + SN + F + +
Sbjct: 183 TSE-DLQQIERNLCATVKTPKLHRSELLRYVHRPHLMRIDYPVEPQDLQSNMLSFLKSAY 241
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN-STLLYCL 296
Y + P + EL R Q + K + K+ YC
Sbjct: 242 TNYDLQKDPW-----------VSELLQQRQ---------QGHDVTKNIHKVFIGGKTYCR 281
Query: 297 SELGVWLALKA---AETISCYESDFFAWEQLDGFGETI------IKKFGSDASQALVTYV 347
+L LALKA ++ + D++ + F + + + + +D + L+ +
Sbjct: 282 DQLRS-LALKAEAMSQELGMSVMDWYLRGCITQFSKMVHMSDSQLLDWSADEKRHLLEIL 340
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVE-RVITAIVLQS 405
+ + + G ++ K+ LI+ L+ E + + C++FVE RV A +
Sbjct: 341 RTLPSIDLNSHDIPPMSLGSMSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACI--- 397
Query: 406 LLSELLPRHCTWKTKYIAGNNSGIQCQSRKK-----------QNEIVEEFRRGLVNVIVA 454
+E+L H + G G S++K Q +E FR G +N+I+A
Sbjct: 398 --AEVLAIHPETRDLLRVGTFVGESENSKRKANIASISEPRNQQATLENFRAGKLNLILA 455
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
TS+LEEG+DV SC+LV+ F+ + + SF+Q RGRAR + S Y++ V
Sbjct: 456 TSVLEEGIDVSSCHLVVCFESPKNLKSFVQRRGRARKEESKYVIFVPQAGRRRDPESWQS 515
Query: 515 LASGNKMRK-EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
L G K + L L G + V+STG + TL ++ ++ +CS L +
Sbjct: 516 LEEGMKAAYLDDLRQVKLATEKEQQSETGHRNFEVKSTGALLTLDNASQHLHHFCSILGA 575
Query: 574 DGYFKPTPKFHINK-EMGICT----LYLPNNCPIQTVIA---QGNIKTLKQAACLEACKK 625
Y P+F + G+ T L L + ++T A K KQ A EA K
Sbjct: 576 GPYIDNRPQFEFTEIRPGVITARVILPLTVDPEVRTACALDTWATEKMAKQDAAFEAYKA 635
Query: 626 LHQIGALTDNLLP 638
L+ G + DNLLP
Sbjct: 636 LYVAGLVNDNLLP 648
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 188/412 (45%), Gaps = 53/412 (12%)
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
E+ + C + P S F +PSI+HR ++A L+ LL + + ++ +
Sbjct: 875 EMAAKDCIVDPVPAPYSVFA--LLLPSILHRFGMAIIAETLRTTLLGPVALD-SAHSLLL 931
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
A+ + + + + LE LGD LK+ A+ L E L+ KK RI+SN L
Sbjct: 932 TRALKSSAADGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLA 991
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG---RKKVKSKT 1098
+ L F+ T+SF W + G + TG +++ SK
Sbjct: 992 RATIAAGLDRFMITKSFTGAKWA--------------PRYAGDLLAETGPAVKEERSSKL 1037
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAE----RLVNVRHL 1154
+AD++E+LIGA + GG ++ + + +++VP A L+ + L
Sbjct: 1038 IADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANSILHEAAPAEADLMGLDVL 1097
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
E+L+ Y+F+ LL+EALTH S+ P + Y+RLEFLGDAVLDY+I+ L+ P LS
Sbjct: 1098 ETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPELSH 1157
Query: 1215 GYLTDMRSASVNNDCYAL-------------------SSVKHGLHKHILHASHELYKRIN 1255
+ +R+A+VN A S K + + + S L +
Sbjct: 1158 QKMHAIRTATVNASFLAFRLFETTIDEETINKTSMRPESQKRAIWQFLRSGSPSLNANRD 1217
Query: 1256 ITVDSFEK--------LSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDS 1297
+ E+ L+ + F W ++T PK L D++ES+ GA+++DS
Sbjct: 1218 NALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 1269
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD +L ++ TV+L P +LT + V+N A +++ GL + ++
Sbjct: 946 YQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMIT 1005
Query: 1246 ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV- 1304
S K + L T K + DIIESL GA + G + V+
Sbjct: 1006 KSFTGAK----WAPRYAGDLLAETGPAVKEERSSKLIADIIESLIGACYTVGGFEKAVLC 1061
Query: 1305 FQSIRPLLEPMIT 1317
Q++ P LEP I+
Sbjct: 1062 VQTLLP-LEPWIS 1073
>gi|169768544|ref|XP_001818742.1| ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40]
gi|121804870|sp|Q2UNX5.1|DCL2_ASPOR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|83766600|dbj|BAE56740.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868391|gb|EIT77606.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1377
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 184/682 (26%), Positives = 297/682 (43%), Gaps = 117/682 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF-VAVFLVPKVVLV 81
R YQ E E +LK+N IV ++TG+GKT IA++ + A+ L P + FL P V L
Sbjct: 17 RQYQYEMFEASLKENIIVAMDTGTGKTQIALLRI---AHQLEGGGPRKLTWFLTPTVALC 73
Query: 82 PQQAEAIKMH-TDLKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ E I+ H ++ G V+ W W E + +V+V T +L + L +
Sbjct: 74 LQQYEVIRSHLPAVRACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALTHGFV 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKSKVSSS 198
+++ + +LI DE HH +H IM +FYH L G ++P I G+TASP+ S
Sbjct: 134 RISQLGLLIFDEAHHCMRRHPANMIMLDFYHPTLRKHGRDSVPCILGLTASPVVRSKS-- 191
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL--YTHLADE 256
Q++ LE+ ++S C + V K + Y P L DE
Sbjct: 192 -----QEMKTLESNLDS---ICKTPQV---------HKQELTTYAHRPELLPIICKAIDE 234
Query: 257 ----LAMIELKHTRSLENLD------------LN---EAQAELIRK-----KVSKINSTL 292
A+ L+H ++D LN E +A ++RK ++ +
Sbjct: 235 GPGGRALQALEHAWDTADIDGDPDAIPQNGSLLNGSGEYKALMVRKTLCNEQIKRFVDRS 294
Query: 293 LYCLSELGVWLA-------LKAAETISCYESDFFAWEQLD-GFGETIIKKFGSDASQALV 344
+ +ELG W A ++ T +S WE + + + K QA
Sbjct: 295 RHIFAELGEWAADYYICTSVEQLRTTIRDQSLTMDWEDEERAYLSNFLSKLPVAEVQA-- 352
Query: 345 TYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQ 404
++ D + F + + K+ LI L ++ E +IFV++ +T
Sbjct: 353 ---------NLADPNNFTM-----SPKLAALINFLDKFDDPE-FSGLIFVKQRVTV---- 393
Query: 405 SLLSELLPRHCTWKTKYIAGNNSGIQCQS-----------RKKQNEIVEEFRRGLVNVIV 453
S+L+ LL H + ++ G+ S KKQ +++FR G N+IV
Sbjct: 394 SVLARLLSLHPQTRDRFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIV 453
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS-------- 505
TS+LEEG+DV +C +V+ FD + SFIQ RGRAR Q S Y +M + D
Sbjct: 454 TTSVLEEGIDVTACRVVVCFDKPANLKSFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQ 513
Query: 506 -TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLI 564
Q+ +E Y ++R+ A P + VE+TG + T S V+ +
Sbjct: 514 ILEQAMVEAYQDEERRLREAEAQEAVDENVP--------EMITVEATGAVITPDSVVTHL 565
Query: 565 YFYCSRLPSDGYFKPTPKFHINKE-MGIC--TLYLPNNCPIQTVIAQGNI-----KTLKQ 616
Y +C+ LP + Y P+F K+ G+ T+ LP+ + QG + + +
Sbjct: 566 YHFCAVLPEERYVDNRPEFSFEKDRQGLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVK 625
Query: 617 AACLEACKKLHQIGALTDNLLP 638
+A + L++ G L D+LLP
Sbjct: 626 ETAFQAYRALYEFGLLNDHLLP 647
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 194/415 (46%), Gaps = 62/415 (14%)
Query: 926 ELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEA 984
E C + P+S + F F+P I+ RL+S L+A N L + +V I+ V+ A
Sbjct: 881 ESCTVDKLPVSTAIFG--LFIPHIVDRLESTLIA----NRLCATILCDVGFADIQHVITA 934
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
I Q + + E LGDS LKY S QLF N EG L+ + I+ N L +
Sbjct: 935 IMAPSAQGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAA 994
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
+ L FI T++ P+ WI P L + R ++++ +K +ADV+E
Sbjct: 995 LDAGLDSFIITKALTPRRWIAP-------------LISTRVGAAPVKRQMSAKVLADVIE 1041
Query: 1105 ALIGAFLSTGGENVGLI----FLDRIGIK-VDFVNVPYQRQFQVHAERLVNVRHLESLLN 1159
ALIGA GG + I FL + + +D ++ Q + A +++ L+ L
Sbjct: 1042 ALIGAAYLDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTEHGRTARHIID-GDLQRHLG 1100
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y+F++ LL+EALTH S + + YQRLEFLGDA+LD +I ++ +SPG +T
Sbjct: 1101 YTFKNEDLLIEALTHPSCQHDQTTQSYQRLEFLGDAILDMVIVPIIFQYSNKISPGDMTL 1160
Query: 1220 MRSASVNNDCYAL-------------------------SSVKH-GLHKHILHASHELYKR 1253
++ A VN + S +H L + + S +L
Sbjct: 1161 IKHAVVNANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLDLQTS 1220
Query: 1254 INITVDSFEKL------SL--GSTFGWESVTSF--PKALGDIIESLAGAIFVDSG 1298
+ +D +L SL G ++ W+S++ K DI+ES+ GAI+VDSG
Sbjct: 1221 RDAALDRHRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSG 1275
>gi|238497846|ref|XP_002380158.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
gi|220693432|gb|EED49777.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
Length = 1339
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 184/681 (27%), Positives = 298/681 (43%), Gaps = 115/681 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP-FVAVFLVPKVVLV 81
R YQ E E +LK+N IV ++TG+GKT IA++ + A+ L P + FL P V L
Sbjct: 17 RQYQYEMFEASLKENIIVAMDTGTGKTQIALLRI---AHQLEGGGPQKLTWFLTPTVALC 73
Query: 82 PQQAEAIKMH-TDLKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ E I+ H ++ G V+ W W E + +V+V T +L + L +
Sbjct: 74 LQQYEVIRSHLPAVRACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALTHGFV 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKSKVSSS 198
+++ + +LI DE HH +H IM +FYH L G ++P I G+TASP+ S
Sbjct: 134 RISQLGLLIFDEAHHCMRRHPANMIMLDFYHPTLRKHGRDSVPCILGLTASPVVRSKS-- 191
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESV----LSNFIPFSTAKFKFYK-YDEIPHALYTHL 253
Q++ LE+ ++S C + V L+ + YK DE P
Sbjct: 192 -----QEMKTLESNLDS---ICKTPQVHKQELTTYAHRPELLPIIYKAIDEGPGGR---- 239
Query: 254 ADELAMIELKHTRSLENLD------------LN---EAQAELIRK-----KVSKINSTLL 293
A+ L+H ++D LN E +A ++RK ++ +
Sbjct: 240 ----ALQALEHAWDTADIDGDPDAIPQNGSLLNGSGEYKALMVRKTLCNEQIKRFVDRSR 295
Query: 294 YCLSELGVWLA-------LKAAETISCYESDFFAWEQLD-GFGETIIKKFGSDASQALVT 345
+ +ELG W A ++ T +S WE + + + K QA
Sbjct: 296 HIFAELGEWAADYYICTSVEQLRTTIRDQSLTMDWEDEERAYLSNFLSKLPVAEVQA--- 352
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQS 405
++ D + F + + K+ LI L ++ E +IFV++ +T S
Sbjct: 353 --------NLADPNNFTM-----SPKLAALINFLDKFDDPE-FSGLIFVKQRVTV----S 394
Query: 406 LLSELLPRHCTWKTKYIAGNNSGIQCQS-----------RKKQNEIVEEFRRGLVNVIVA 454
+L+ LL H + ++ G+ S KKQ +++FR G N+IV
Sbjct: 395 VLARLLSLHPQTRDRFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVT 454
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS--------- 505
TS+LEEG+DV +C +V+ FD + SFIQ RGRAR Q S Y +M + D
Sbjct: 455 TSVLEEGIDVTACRVVVCFDKPANLKSFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQI 514
Query: 506 TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIY 565
Q+ +E Y ++R+ A P + VE+TG + T S V+ +Y
Sbjct: 515 LEQAMVEAYQDEERRLREAEAQEAVDENVP--------EMITVEATGAVITPDSVVTHLY 566
Query: 566 FYCSRLPSDGYFKPTPKFHINKE-MGIC--TLYLPNNCPIQTVIAQGNI-----KTLKQA 617
+C+ LP + Y P+F K+ G+ T+ LP+ + QG + + +
Sbjct: 567 HFCAVLPEERYVDNRPEFSFEKDRQGLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVKE 626
Query: 618 ACLEACKKLHQIGALTDNLLP 638
+A + L++ G L D+LLP
Sbjct: 627 TAFQAYRALYEFGLLNDHLLP 647
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 169/410 (41%), Gaps = 90/410 (21%)
Query: 926 ELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEA 984
E C + P+S + F F+P I+ RL+S L+A N L + +V I+ V+ A
Sbjct: 881 ESCTVDKLPVSTAIFG--LFIPHIVDRLESTLIA----NRLCATILCDVGFADIQHVITA 934
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
I Q + + E LGDS LKY S QLF N EG L+ + I+ N L +
Sbjct: 935 IMAPSAQGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAA 994
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
+ L FI T++ P+ WI P L + R ++++ +K +ADV+E
Sbjct: 995 LDAGLDSFIITKALTPRRWIAP-------------LISTRVGAAPVKRQMSAKVLADVIE 1041
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRD 1164
ALIGA GG + + Q H L +
Sbjct: 1042 ALIGAAYLDGGHS--------------------KAQICTHC-------FLPEVNRQPLDI 1074
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PSL+ + HG I EFLGDA+LD +I ++ +SPG +T ++ A
Sbjct: 1075 PSLITQT-EHGRTARQIID------EFLGDAILDMVIVPIIFQYSNKISPGDMTLIKHAV 1127
Query: 1225 VNNDCYAL-------------------------SSVKH-GLHKHILHASHELYKRINITV 1258
VN + S +H L + + S +L + +
Sbjct: 1128 VNANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLDLQTSRDAAL 1187
Query: 1259 DSFEKL------SL--GSTFGWESVTSF--PKALGDIIESLAGAIFVDSG 1298
D +L SL G ++ W+S++ K DI+ES+ GAI+VDSG
Sbjct: 1188 DRHRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSG 1237
>gi|353236820|emb|CCA68807.1| hypothetical protein PIIN_02669 [Piriformospora indica DSM 11827]
Length = 1466
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 243/528 (46%), Gaps = 83/528 (15%)
Query: 879 ERYGIQLCFD-REPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE---LPPELCRIIMAP 934
+R G + D +PL+ + V N LS P + + PELC P
Sbjct: 846 KRKGFEGLVDYDQPLIEVSNLPSVVNRLSPTISSSNTAPGAPLYTAKFVIPELCSKFTIP 905
Query: 935 ISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDF 994
S T + + +PSIM R++ LL L M N I + AIT +
Sbjct: 906 AS--TMRTLSLLPSIMKRVEDTLLVRELNAMYF-----NNEIDESALQAAITAPSASMEV 958
Query: 995 HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
E LE LGD++LKY +S LF T N HEG+L + +++IISN AL + LP +I+
Sbjct: 959 DYERLELLGDAYLKYLSSIYLFVTNPNKHEGILHLARQKIISNRALLVNADKSGLPQYIQ 1018
Query: 1055 TESFDPKMWIIPG-------------------------------------------DNSG 1071
++ F PKMW+ G D S
Sbjct: 1019 SKPFLPKMWLPRGYTVVRPEPKSTATHKESRGNTNMEIKEERSSPDPNGLPTSANEDKSL 1078
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD 1131
+ + ++ L + + +Y + + K VADV EA+IGA TGG ++GL + + + +
Sbjct: 1079 TIKADEQKLKSKKSLYDEDHQWLGDKCVADVAEAIIGAAFQTGGPSLGLKVVKSLHLPLP 1138
Query: 1132 FVNVPYQRQFQVHAERLV---------NV-RHLESLLNYSFRDPSLLVEALTHGSYMLPE 1181
F+ F + A+ NV +E+ + F P +L +ALTH S +
Sbjct: 1139 FIES--WDDFSLKAKAPPPDLTITLEDNVLETVEATVGAKFHRPHILAQALTHTSARGND 1196
Query: 1182 IPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHK 1241
+ CY+RLEFLGDAVLD+L+ ++++ + L+PG LT ++ A V+N A SV +GLHK
Sbjct: 1197 M-TCYERLEFLGDAVLDFLVIQHIFDLHGRLTPGALTMLKGAMVSNSALAAISVHYGLHK 1255
Query: 1242 HILHASHELYKRINITVDSFEKLSL---------GSTFG--WESVTSFPKALGDIIESLA 1290
++ S + K I+ V + E+ G G W V PK++ D++ES+
Sbjct: 1256 FLVVESKNVKKAIDEYVPAVEEKQRLEYAAADEEGRLKGQYWLEVEP-PKSVADVVESIL 1314
Query: 1291 GAIFVDSG---CNREVVFQS-IRPLLEPMITPETMRFHPVRELTEYCQ 1334
GA++V G + ++ + +RP + I+ +T+ HP + L E Q
Sbjct: 1315 GALYVSDGFKLTGAQAMYDTLLRPFYDQHISLKTLSHHPTKILFELFQ 1362
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 43/311 (13%)
Query: 362 NLDSGL----LTEKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCT 416
NLD+ ++ K+ L++ L ++ D R ++ V R ITA+ + +L + +
Sbjct: 266 NLDAASRGFNVSPKVTKLVQILQCFQQAGDTFRGVVLVRRRITALAIVEIL-----KTAS 320
Query: 417 WKTKYIAGNN-SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ +I +G Q ++E+F+ G+ N+++AT I E+GLD+ C VI +D
Sbjct: 321 EQIPFIRVEALTGPWSHENLPQLSLLEDFKNGIYNLLIATKIAEDGLDMPPCTCVIRYDI 380
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMV-KSGDSTTQ-----SRLENYLASGNKMRKEVLSHA 529
S + S+ Q+R A+ ++ +LM+ K+ D Q +R+ + + + R +
Sbjct: 381 SHSSVSYAQTRAMAKGKDCHLILMLDKNSDMGRQTIRGVARMPDEVKDWTQ-RVAINKSG 439
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTI---------ATLSS------SVSLIYFYCSRLPSD 574
+ P + ++ + G Y+ +S G T+S +VS+IY Y + L
Sbjct: 440 AYPPATISQNTEG---YYSDSDGEAHAQAEYIKDPTMSGRIYAEDAVSVIYRYLATLRKG 496
Query: 575 GY--FKPTPKFHINKEMG---ICTLYLPNNCPIQTVIAQGNIK--TLKQAACLEACKKLH 627
K F+ +CT+ P N I V ++ K+AAC EACK+LH
Sbjct: 497 SVEDVKMENVFYFTMRASSEHVCTVVFPPNGFIAHVEGPPSVSPGAAKRAACFEACKRLH 556
Query: 628 QIGALTDNLLP 638
++G L+ L P
Sbjct: 557 ELGLLSYRLFP 567
>gi|393246311|gb|EJD53820.1| ribonuclease III [Auricularia delicata TFB-10046 SS5]
Length = 1227
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 248/523 (47%), Gaps = 64/523 (12%)
Query: 888 DREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVP 947
+ +PL+ RI + N L + +E F +P E+C + P S TF + VP
Sbjct: 637 ENQPLIEVARIPGLVNRLFPASRAISEEIDPPKFIIP-EVCARFVIPAS--TFETAYLVP 693
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
+ R++ LL LL+H + I +L AI++ D + LE LGDS L
Sbjct: 694 CCLRRIEDTLLV-----KLLNHQFFDNEIEERLLLSAISSPSLCGDLDYQRLELLGDSVL 748
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ AS LF + E L + ++ I SN AL + LP FI T+ F K WI P
Sbjct: 749 KFLASAALFVRKPTSSESELHLGRQNIFSNRALTQAARRAGLPPFILTKPFSIKSWIPPN 808
Query: 1068 ---DNSGSYELNDDSLFNGRKI--YVTGRKK--------------------VKSKTVADV 1102
D + + L+++ K+ Y R++ + KT+ADV
Sbjct: 809 YDFDRAPAKPLSEEDALIPEKVAAYKLAREREQKADAQARVKRQQDASEHWIGEKTIADV 868
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKV-DFV----NVPYQRQFQVHAERLVNVRHLESL 1157
EA++GA TGG+N+ L R+ +K+ D+V N+P + Q+ E L H+E L
Sbjct: 869 TEAILGAAFLTGGKNLVLRAAKRLAVKLQDYVDVKANIPGRSHVQLRCESL---EHVERL 925
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
L + P L+ +ALTH S + + YQRLEFLGDA+LD L+ Y++ +Y L P L
Sbjct: 926 LGRPIQRPHLVAQALTH-SVIDSSLATSYQRLEFLGDAILDLLVVRYIW-RYEKLDPEAL 983
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF-----EKLSLGSTFGW 1272
T +++A V+N A V+ GLHKHI+HAS L +I+ V + ++ +L +
Sbjct: 984 TLLKAAMVSNSTLAAVCVQCGLHKHIIHASPSLGVKIDNYVKALHSARDKERALAQSEVR 1043
Query: 1273 ESVTSF-----PKALGDIIESLAGAIFVDSG---CNREVVFQSI-RPLLEPMITPETMRF 1323
+ V + PK L D+IESL GA+F+ E F+++ R + I +
Sbjct: 1044 QPVQYWLELEHPKPLSDLIESLLGALFISENYAIAPLEAFFENVLRLFYDEHIRLSSCSS 1103
Query: 1324 HPVREL-----TEYCQKNHF--SMKKPVASRISGKAAVTVEVQ 1359
HP L + CQ+ + +K A I GK ++T Q
Sbjct: 1104 HPTTTLFKMLESRSCQRFEMEKTTQKAAAYHIDGKLSLTSAFQ 1146
>gi|158300291|ref|XP_320248.4| AGAP012289-PA [Anopheles gambiae str. PEST]
gi|157013088|gb|EAA00264.4| AGAP012289-PA [Anopheles gambiae str. PEST]
Length = 1672
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 210/436 (48%), Gaps = 70/436 (16%)
Query: 973 NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKE 1032
NV + +L+A+TTK + F+LE E LGD+FLK+A S + + + HEG L+ K
Sbjct: 1191 NVALQQSDLLQALTTKSSADVFNLERFEVLGDAFLKFAVSVYILFRHTSWHEGYLTTCKG 1250
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKM-WI-----IPG-------DNSGS------Y 1073
R++SN L LPG I+ FDPK W+ +PG D + S
Sbjct: 1251 RMVSNRNLLYCAMGYGLPGKIKAHPFDPKNDWVPPLSTVPGAVRRAMVDANESPALLYNL 1310
Query: 1074 ELNDDSLFNGRKIYVTGRK-----------------------KVKSKTVADVVEALIGAF 1110
+L ++ + +G T K +++ K VADV EAL+G
Sbjct: 1311 KLTEEEIQSGVVAQATVDKFLPLIEQAPAPSQSTLHTVLQQVQIRDKVVADVTEALLGVC 1370
Query: 1111 LSTGGENVGLIFLDRIGIKVDFVNVPYQRQ---------FQVH---AERLVNVRHLESLL 1158
+ T G FL +GI +VP + F V + L N +E+ L
Sbjct: 1371 VKTVGYERSFRFLSHLGIIPKGADVPMLLRTTTFPIGDYFPVRHKVDQLLCNPERIEATL 1430
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
Y FR+ + L++A TH SY + YQ+LEFLGDAVLD+L+++Y+Y + P +SPG LT
Sbjct: 1431 GYRFRNRTYLLQAFTHTSYTSNSLTGSYQQLEFLGDAVLDFLVSMYIYERNPSMSPGQLT 1490
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGW------ 1272
D+RSA VNN A V++ LH+HIL S L I V + + W
Sbjct: 1491 DLRSALVNNVNLACVLVRNELHRHILSQSPMLTDAIGKFV-AVHRCHRNQGSNWVRLLTE 1549
Query: 1273 ESVTSF------PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR--FH 1324
ES T PK LGD++E+L GAI++DSG + ++ LL I T +
Sbjct: 1550 ESDTPMAEYVDVPKVLGDVLEALIGAIYLDSGNDLAATWEVCFRLLRDEIADFTRKTPIQ 1609
Query: 1325 PVRELTEYCQKN-HFS 1339
VR+L E+ + + HFS
Sbjct: 1610 VVRQLYEHPEASPHFS 1625
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 167/667 (25%), Positives = 286/667 (42%), Gaps = 120/667 (17%)
Query: 382 YRGVEDI--RCIIFVERVITAIVLQSLLSELLPRHC-------------TWKTKYIAGNN 426
YR ED + ++FV+R TA VL L+ HC K +I G N
Sbjct: 375 YRTAEDKNKQALVFVKRRFTAKVLYHLIRIYF--HCLSKRDNEDELVEPIVKPDFIVGAN 432
Query: 427 SGIQ-----CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
+ ++ ++ ++E FR+ +NV+ AT++LEEG+D+Q CN+VIM+D + S
Sbjct: 433 AALEESIDAILVVREDRRVIENFRKRKINVLCATNVLEEGIDLQMCNMVIMYDAPLSYAS 492
Query: 482 FIQSRGRARMQNSDYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
F+QS+GRARM+ S YL+M + D R++ Y N++++E++ PL N +
Sbjct: 493 FMQSKGRARMKTSTYLMMTPAADLQQFAKRMKLYRDIENRLKEELVGKTINRPEPLENDV 552
Query: 541 YGE---DFYHVESTGTIATLS--SSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMG--IC 592
E D T A L S++ L+ YC +P D + + I++ I
Sbjct: 553 RKELLDDLIPPFYTPFKAKLDALSAIQLLNRYCMSMPRDLFTGSNVTWERIDRSPTEIIV 612
Query: 593 TLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA-- 647
T+ LP ++ VI N+K KQ+A ACK+L ++G L LLP +K +
Sbjct: 613 TVKLPLQSTVREVIHGQTMKNLKLAKQSAAFNACKRLFEVGELNMYLLPIATKDKVEELS 672
Query: 648 -------QKRGNEP---------YNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN 691
+K +EP Y H I +P E V +PQ + Y++ ++ HF+
Sbjct: 673 EQYFKLWRKMSDEPNPKQAGTMKYVRGHKIVYPEETVGCTPQADGEQCYVYIVRMRAHFD 732
Query: 692 YDISARNIVLAMRTELESEIKKVNFDL-------EVERGRLTVNLKHLGRIQLIPNQVLL 744
+ N+ + EL S NF + + R +L V L +G ++++P V +
Sbjct: 733 ANTHLENVRIFQ--ELYSSAN--NFGILTRKRLPRLARMKLFVTLGAIG-VEIVPEPVCI 787
Query: 745 C-----------RRFQITLFRVIMDHNLDKLNEILDGFELRDNL--EIDYLLLPS-TGQL 790
+RF + LFR ++ ++ F + D L E +L++P Q
Sbjct: 788 TLAPDSGELQRLKRFHLLLFRDLL--------KVWKPFTVLDALPEENGFLIVPMLRSQS 839
Query: 791 IDWKTVATVLFPR------DNGSKHNMNCSTMFNARIVHT--KSGPLCTCKIHNSLVCTP 842
IDW+ + + R +H + + R+VH K+ P
Sbjct: 840 IDWELMGKFPYLRPAAETSTRARQHLRFETEQYLLRVVHPWYKNDP-------------- 885
Query: 843 HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHY-EERYGIQLCFDREPLLNGRRIFHV 901
Q Y + V L S F N +Y++++ +E + + + + + L+ + I
Sbjct: 886 --DQNYVVVRVRDDLRPTSPFP--NAKYDSYEQYFAQEHHQVVVRHEDQFLIEVKGITTS 941
Query: 902 QNYLSKCRQQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
N L + ++ + L PEL P + T +PS +HR+ L
Sbjct: 942 LNRLHPGAEADGGASTRSRYWEFQEILIPELVHNFEFPADY--WLKATLLPSALHRVHYL 999
Query: 957 LLAVNLK 963
LLA ++
Sbjct: 1000 LLAEGIR 1006
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 8/215 (3%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
RNYQ++ E L +NTI+FL TGSGKT IA+M+++ ++ LR FL V
Sbjct: 13 RNYQVQMKEICLAKNTIIFLPTGSGKTYIALMVMKEISHQLRNTVHEGGKRTFFLANTVA 72
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA+ H V Y ++ VD W W EE S+ +V++ T QILLD LR Y
Sbjct: 73 LAKQQAQFFARHMPFNVRLYTSEVNVDAWKSDRWHEEFSEGQVIICTAQILLDVLRHGYM 132
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
I +++ DECH A G+H IM E ++ S PR+ G++ + + ++ +
Sbjct: 133 SPANINLIVFDECHRAVGQHPMHAIMKE----IVAAPASERPRVLGLSGTLLFKELKMAS 188
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
Q ++ LE +S + T A+ + FST
Sbjct: 189 Q-VPDELERLENTFSSTIATVANYDDYATVASFST 222
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 187/662 (28%), Positives = 301/662 (45%), Gaps = 81/662 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE L+ +LKQN IV ++TGSGKT +A+ LR A L R + FL P V L
Sbjct: 85 RAYQLEMLDQSLKQNVIVVMDTGSGKTQVAV--LRIKAELDRSAPDKIIWFLAPTVALCG 142
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ + I++ + + G+ VD W TW + V+V T Q+LLD L ++ +
Sbjct: 143 QQFDVIRLQAASVPMKLITGNDQVDTWSADTWDTILDGVRVVVSTYQVLLDALCHAFINI 202
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+ + ++I DE GKH + IMT+FYHR T +S +P I G+TA+P S +D
Sbjct: 203 DRLSLIIFDE-----GKHPGSKIMTDFYHRNKHTAES-IPNILGITATP------SMTED 250
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK--YDEIPHALYTHLADELAM 259
+ + LE ++++K C S + + + + Y YD YT +M
Sbjct: 251 L-ENMEILEAVLDAK---CISPTRHREELLKCVKRPQIYSILYDAPRSLQYTE-----SM 301
Query: 260 IELKHTRSLENLDLNEAQAEL----------IRKKVSKINSTLLYCLSEL-GVW-LALKA 307
L+ R NLD+ E L R V + + +++ G+W +++
Sbjct: 302 YRLR--REFLNLDITEDPYILRLQEDPSDRNCRALVRAVEKYDTFVQNQIKGLWGRSVEI 359
Query: 308 AETISCYESDFFAWEQLDGF-GETIIKKFGSDASQALVTYVPSGAEW-SIGDDSKFNLDS 365
+ + + +D + W+ F T +D A Y+ S +
Sbjct: 360 LQQLGTWAADMYIWKSASAFLARTNTNGIFNDWLDAEKKYLADFIRRVSPSCPAPMPQSG 419
Query: 366 GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
++EK L+ L+ E C+IFV+ TA L+ L PR K+ G+
Sbjct: 420 SEVSEKATALVRELVSVE--ESTICLIFVKERATASALREFLMS-CPRIV---EKHRIGS 473
Query: 426 NSGI-QCQSRK-----------KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
G QSRK Q ++ FR G +N+++ATS+LEEG+DV +CN+VI F
Sbjct: 474 MVGTSNYQSRKLTLSELIGQSSDQMAALQSFRSGKINILIATSVLEEGIDVPACNMVICF 533
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---QSRLENYLASGNKMRKEVLSHAS 530
D T SF+Q RGRARM+ S +L+ + S ++ EN A ++E+ + S
Sbjct: 534 DHPATPKSFVQRRGRARMKESKLILLSEYSSSAVGKWEALEENMKAVYQDTQREIRTIQS 593
Query: 531 LPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF------- 583
L ++ F VESTG ++ S + +C L + P +
Sbjct: 594 L----EDSEESSSTFMEVESTGARLDFENAKSHLEHFCRVLSQGDFVDSRPDYITHSHED 649
Query: 584 --HINKEMGICTLYLPNNCPIQ--TVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNL 636
+K M T+ LP+ P Q + ++ + ++ K A A +A + L+Q G + ++L
Sbjct: 650 WDSSSKPMLSATVLLPSLVPAQLRQIDSKSSWRSEKNATKDAAFQAYQTLYQAGLVNEHL 709
Query: 637 LP 638
LP
Sbjct: 710 LP 711
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 221/494 (44%), Gaps = 66/494 (13%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PS++H L+ L+A L LL+ N+T + V EAI+++ E + E LE LGD
Sbjct: 957 LIPSLIHELEVTLIAKELSTTLLERI--NITDLGL-VREAISSRSAAEPVNYERLEFLGD 1013
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW- 1063
S LKY + Q+ + EG LS K+R++ N+ L + + L FI T+SF + W
Sbjct: 1014 SILKYCTAIQVSAIHPEWPEGYLSFFKDRLVGNSRLSRAAIDVGLAKFILTKSFTGQKWR 1073
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG----ENVG 1119
+ DN + G V+ RK + +KT+ADVVEALIGA GG +N
Sbjct: 1074 PLYLDN-----------YTGNPGKVSPRK-ISTKTLADVVEALIGASYINGGITKAQNCI 1121
Query: 1120 LIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV-----RHLESLLNYSFRDPSLLVEALTH 1174
+F++ I + +V R R +V + LE L+ Y F+ SLL+EA+TH
Sbjct: 1122 SLFVNEI----QWQDVSANRALFFKMARDQDVLPAELKPLEHLVGYQFKKKSLLIEAMTH 1177
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
S M R Y+ LEF+GDA+LD++I +Y P L+P + +++A VN D A S
Sbjct: 1178 QSCMFDYNRRSYEHLEFIGDAILDFIIVRKMYTAGPLLAPYQMHSLKTAMVNGDFLAFLS 1237
Query: 1235 VKHGLHK-----------------------HILHASHELYKRINITVDSFE--------K 1263
+ H + + + H+S + T+ +E
Sbjct: 1238 LDHQMRRTETAVTSSLQIIDKETTPLALWTFMRHSSEAIGIEQAATLKRYEALRGEILAA 1297
Query: 1264 LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCNR--EVVFQ--SIRPLLEPMIT 1317
L GS + W + K DI ESL GA++VDSG E + Q + +L+ ++
Sbjct: 1298 LRQGSRYPWALLARLQAKKFYSDIFESLLGAVWVDSGSIELCECMLQKFGVLSILDRLLK 1357
Query: 1318 PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTA 1377
HP L + + V G+ A T V ++ ++
Sbjct: 1358 DRVAVQHPKEVLGKMAVTQTVTYDVDVQEAPDGEKAFTCRVLMGEKVVTEVVDGVTREEV 1417
Query: 1378 KKVACKEVLKSLRA 1391
K A +E ++ L A
Sbjct: 1418 KTKAAEEAIRILGA 1431
>gi|225684610|gb|EEH22894.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1415
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 192/715 (26%), Positives = 318/715 (44%), Gaps = 112/715 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +LK+N I+ ++TGSGKT IAI+ +R + + FL P V L
Sbjct: 31 RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCTEDK--LVWFLTPTVALAD 88
Query: 83 QQAEAIKMHTDLKVGKYW-GDMGVDFWD-GATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ + I + + G V +W W + + +++V TPQILLD L +
Sbjct: 89 QQHKNISQQLSVYQTRLLLGTDKVHYWSTKKIWDDVLLNIKIVVSTPQILLDALSHGFIT 148
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-TG-DSNLPRIFGMTASPIKSKVSSS 198
++ I +L+ DE HH G IM FYH L+ TG ++LP I G+TASP+ S
Sbjct: 149 MSRISLLVFDEAHHCDGFSPANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVTRADPES 208
Query: 199 EQDYWQKIHDLETLMNSKVYTCA-SESVLSNFI---PFSTAKFKFYKYDEIPHA-LYTHL 253
+ +E +N++ T L ++ T KF+ D + H+ + +L
Sbjct: 209 -------LKRVEKNLNARCETPRIHREELMRYVHRPELYTVKFR---TDSLIHSDMLQNL 258
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL--ALKAAETI 311
+ + ++++ ++ L E + K + + +CLS+L L A+ + +
Sbjct: 259 SRIVGTVDIEKDPWIKRLRRQEDRRSQ-EKLLYALEKRKTHCLSQLSKLLRQAINVHDDL 317
Query: 312 SCYESDFFAWE-------------------QLDGFGETIIKKFGSDASQALVTYVPSGAE 352
+ +D F E LD E I + S+ S + P +
Sbjct: 318 GPWAADAFISEVIERLETKRTMYQHVELHSSLDREEEAFIFELLSELSIS-----PVKQD 372
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
W DSK S +++ K+ L+E LLE D IIF ++ T ++LS L+
Sbjct: 373 W----DSK----SNIVSTKVNLLVE-LLESEHTADFTGIIFAQQRATV----TMLSHLIS 419
Query: 413 RHCTWKTKYIAGNNSGIQC-----------QSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
+H K + G G C + Q +++ R G N+++ATS+LEEG
Sbjct: 420 KHPRLKDIIVTGAFLGDACYASRTSTITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEG 479
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS---GDSTTQSRLENYLAS- 517
+DV +C+LV+ FD + + SFIQ RGRAR + S +++ + S + +RLE + S
Sbjct: 480 IDVSACHLVVCFDAIKNLRSFIQRRGRARKERSKFVMFLDSDKISEEKQWTRLEEVMRSI 539
Query: 518 -GNKMRK--EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD 574
+ MR+ +V++ ++ G+ + +ESTG + TL ++ + +C+ L
Sbjct: 540 YEDDMRRLEDVMARENIVEE-------GDQYLRIESTGALLTLENARQHLEHFCATLHY- 591
Query: 575 GYFKPTPKFHINKEMGICTL----YLPN--NCPIQTVIAQGNIKTLKQA---ACLEACKK 625
+ P F ++ G T+ LPN + + + KT + A A +A K
Sbjct: 592 AFTDSRPHFIFDESEGDGTIAAKVVLPNVLDPKFRVIYGSKRWKTERMAQRDASFQAYLK 651
Query: 626 LHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
L+ G + D LLP RG+E E+ Q P KI+ H
Sbjct: 652 LYNEGLVNDYLLP--------VHWRGDEDPKLEY--------CEQRPSVVKISRH 690
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 181/425 (42%), Gaps = 77/425 (18%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVL 982
P C I P+ + F PSI+H++++ L+A L +L ++ + V+
Sbjct: 911 PARECSIDKLPLEYTMFS--LLCPSIIHKVETFLIAEELNKTILSPVGFTDLNL----VI 964
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
A+ +E + + +E LGDS LK+ S QL HEGLLS K+ ++SN L
Sbjct: 965 TALCAPDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSY 1024
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N E D R+++ +KT+ADV
Sbjct: 1025 AAIETGLDKFIFMDIFTGVKW-RPRYNKAHVEEQD-----------IPRREMSTKTLADV 1072
Query: 1103 VEALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV------- 1151
+EAL+GA GG E IFL I +P+ +F + V
Sbjct: 1073 IEALLGAATIDGGRTKVEKCLKIFLPEIRW------MPFADRFDALYNSVPEVYENLPSS 1126
Query: 1152 --RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
R +ESL+ Y F L +A TH S P YQRLEFLGD++LD++I +++N
Sbjct: 1127 WFRDIESLVGYIFNKKVFLAQAFTHPSN--PGSTMSYQRLEFLGDSILDHIIVDHIFNSP 1184
Query: 1210 PGLSPGYLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHI 1243
+ MR++ N D A +++ K L +++
Sbjct: 1185 RNFQHVDMHLMRASLANADFLAFLCIGMTTEEERGEIVEASRNGTFTRMTTRKISLWQYM 1244
Query: 1244 LHA-SHELYKRINITVDSFEKLSLGSTFGWESVTSFPKAL----------GDIIESLAGA 1292
H S EL TV+ ++ L T ++P AL D+IES+ GA
Sbjct: 1245 RHGTSWELTVSQQQTVNQYQALKADITKALYESDTYPWALLSRLRAQKFFSDLIESVLGA 1304
Query: 1293 IFVDS 1297
IF+DS
Sbjct: 1305 IFIDS 1309
>gi|305354766|emb|CBL30926.1| Dicer protein [Echinococcus multilocularis]
Length = 1981
Score = 182 bits (463), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 219/456 (48%), Gaps = 77/456 (16%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
PT+ +L+++T + ++E LET+GDSFLK+A + LF Y HEG LS + +I+
Sbjct: 1503 PTM-ILQSLTLLGAGDFINMERLETIGDSFLKFAVTMDLFLRYPEAHEGHLSSLRSQIVG 1561
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIPGDNSGSYELNDDSLFNGRKIYVTGR---- 1091
N+ L +LGCE+ LPG I +F+P + W+ P Y DS N + +
Sbjct: 1562 NSNLYRLGCEKNLPGRIVGMAFEPHENWLPP-----CYVCTTDSTNNIASTRIKNQCPSL 1616
Query: 1092 --KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDFVNVPYQ---- 1138
+ + +K+VAD VE+L+G +L+ GE L L GI ++ P++
Sbjct: 1617 THQFLTNKSVADCVESLVGCYLTERGERSALKLLQWFGIECLPPAGEMQPAGSPWKLAEE 1676
Query: 1139 ----RQFQVHAERLVNV---RHLESLLNYSFRDPSLLVEALTHGSYM------------- 1178
+ + ER+ LE ++ Y+F++ LL+EA TH +
Sbjct: 1677 KPLSKVEEATVERVYRAGRFSKLEEIIGYTFKNRRLLIEAFTHSTCRDLHGPPSDDDGGF 1736
Query: 1179 ---LPEIPRCYQRLEFLGDAVLDYLITVYLY--NKYPGLSPGYLTDMRSASVNNDCYALS 1233
+ I Y+RLEFLGDAVLDY +T +L+ + LSPG LTD+RSA VNN +
Sbjct: 1737 HGSVTSISGGYERLEFLGDAVLDYAVTRFLFTTDATARLSPGALTDLRSALVNNVVFGAL 1796
Query: 1234 SVKHGLHKHILHASHELYKRINI-----------TVDSFEKLSLGSTFGWESVTS----- 1277
+V+HGLH + A+ L + + + +D + + + T+
Sbjct: 1797 AVRHGLHAFLRAAAPPLTRTMALFLRHHHDVVRGDLDVLIAPEVNACRENKGATASQAEG 1856
Query: 1278 --------FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVR 1327
PKALGD+ ESLAGA+F+DSG +++ PLL I + PVR
Sbjct: 1857 DRANEEVEVPKALGDVFESLAGAVFLDSGLCLNTLWRVFFPLLRERIERYSTCVAKSPVR 1916
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGR 1363
L E C + ++P+ R GK V V V GR
Sbjct: 1917 RLLELCPE-RVKFERPMV-RPDGKMRVVVRVAGIGR 1950
>gi|321458470|gb|EFX69538.1| hypothetical protein DAPPUDRAFT_329028 [Daphnia pulex]
Length = 1597
Score = 182 bits (463), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 237/485 (48%), Gaps = 62/485 (12%)
Query: 952 RLQSLLLAVNLK--NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKY 1009
R S AVN + + +D+C + + +VL A+TT + LE LE +GDSFLK
Sbjct: 1126 RNSSAAFAVNFRFDDGPMDNCPKGPS--PGEVLRALTTSVANAGYDLERLEVIGDSFLKL 1183
Query: 1010 AASQQLF-KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM-WIIP- 1066
AAS +++ + + HEG ++ + + N L KLG + +P F+ F K W+ P
Sbjct: 1184 AASIRVYCDSPSHFHEGKMTHLRMLQVCNRNLFKLGKIKSIPRFVVATKFVAKENWLPPC 1243
Query: 1067 ----GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 1122
+ EL D N K++ +++ K+VAD VEAL G +L+ G L
Sbjct: 1244 YFPNNTDDDCMELETDEKPNA-KLW----QRISKKSVADSVEALFGLYLTLHGIKGALKV 1298
Query: 1123 LDRIGIKVD-----------------------FVNVPYQRQFQVHAERLVNVRHLESLLN 1159
+ +G+ V ++ P + + + L LE LN
Sbjct: 1299 MRWMGVNVPDSSGDEDSSSSSSSFGGTPPEPLLLDSPQAKH--LLDDHLAGFETLERSLN 1356
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPGLSPGYLT 1218
+ F + L++A +H SY + CYQRLEFLGDAV DYLIT YLY+ + L+PG L+
Sbjct: 1357 FRFGNRFYLLQAFSHASYHHNRMTSCYQRLEFLGDAVFDYLITKYLYDCRLFQLTPGALS 1416
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN-----------ITVDSFEKLSLG 1267
DMRSA VNN +A+ +V++G H+++ H ++++ I+ T D F +
Sbjct: 1417 DMRSALVNNVTFAVLAVRNGFHRYLKHLVPDVHQAIDRFVQQQEMCDHATPDEFFLIGTH 1476
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET--MRFHP 1325
E+V PK LGDI ESL GA+F+DS + + V++ PL+ I T + P
Sbjct: 1477 DDPMAEAV-EVPKVLGDIFESLVGAVFLDSDMSLDAVWRVFYPLIRQEIEACTRVVPKSP 1535
Query: 1326 VRELTE-YCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKE 1384
+R + E Y K F K + + G+ + VEV NGRL++ + + + AK A K
Sbjct: 1536 IRTIYEKYPGKVQF---KTLENLPDGRICIAVEVLNNGRLYKG--VGKNSRIAKNTAAKY 1590
Query: 1385 VLKSL 1389
L L
Sbjct: 1591 ALSQL 1595
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 132/224 (58%), Gaps = 24/224 (10%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV- 70
EE +++P RNYQLE E+A ++NTIV+L TGSGKT+IA++L+R YA + K + +
Sbjct: 5 EEPKENSIP--RNYQLELYEHARRENTIVYLPTGSGKTMIAVLLIRDYAAQVNKFAAQIK 62
Query: 71 -----------AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK 119
VFLVP V+L QQA I+ HT L+VG+Y+G++GVD W G W +E+ K
Sbjct: 63 CFRPLAQDGQRVVFLVPTVILAKQQAAYIRRHTCLEVGEYYGELGVDLWKGDRWAKELEK 122
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARG----KHQYACIMTEFYHRLLET 175
+ VLVMT Q+ ++ + + + + +L++DECH A KH ++ EF R
Sbjct: 123 NNVLVMTAQLFVNAVNHGFISVGQMALLVIDECHRAVKDSPMKHSL-IVLNEFCQR---H 178
Query: 176 GDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYT 219
G ++PR+ G+TA+ K +D + I L+T MNS + T
Sbjct: 179 GAGSVPRVLGLTAALFLEKCKP--KDVTKNISKLKTSMNSIIRT 220
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 182/702 (25%), Positives = 299/702 (42%), Gaps = 142/702 (20%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYI---------AGNNSGIQCQSR---KKQN 438
I+FVER +A VL +L E C Y+ +GN G ++ + Q+
Sbjct: 395 IVFVERRSSANVLYHILREA--SQCDPGLSYLNPLFTMGQASGNPKGKMKENHHLNQSQS 452
Query: 439 EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLL 498
+I+ +FR G N++VATS+LEEG+DV++CNLVI FD +T C ++QS+GRAR N+ Y+L
Sbjct: 453 KIIRQFRDGTCNLLVATSVLEEGVDVRACNLVIRFDGIKTFCDYVQSKGRARSPNAFYIL 512
Query: 499 MVKSGDSTTQSRLENYLASGNKMRKEVLSHASL---------PCSPLNNHMYGEDF--YH 547
MV + S + LA + + + ++ +S+ P P ++ + Y
Sbjct: 513 MVPT---EKLSPFLDTLAGFHFIEQSLMDPSSVMMSSVTDDEPSDPQLEQLWQKIIPPYC 569
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-------EMGI--------- 591
G TL SS+SL+ +YC+ LPSDG P + +N+ EM
Sbjct: 570 PYPDGPRVTLLSSISLLNWYCATLPSDGSAPLAPYYVVNRISAGSLAEMDRDHTNHLRRL 629
Query: 592 ---------CTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTD-NLLP 638
CTL LP NCP++ + + + KQ L+AC +LHQ+G L D +L+P
Sbjct: 630 GSTIQNPFRCTLLLPLNCPLRDELIGRVMPSKRLAKQEVSLQACIRLHQLGELDDQHLMP 689
Query: 639 ------------DIVVEKHDAQKRGNEPY----------NAEHPIY---FPPELVNQSPQ 673
D+ + +G++ Y P Y E+V S Q
Sbjct: 690 LSKSVVETDENADVDFDCQFEHSQGSDFYLRGVARLLDGVIASPFYLYLLTYEVVKDSAQ 749
Query: 674 DTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVN-FDLEVERGRLTVNLKHL 732
+ F+ + + R + +L + VN F L G++ V +
Sbjct: 750 P------------ENQFDPNRAQRRMGFLSSQKLPA----VNPFGLYSPAGQINVGFLEV 793
Query: 733 GR-IQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPSTGQLI 791
++L + V LC RFQ LF I+ L G E + YL++P T I
Sbjct: 794 DSFLRLTLDDVKLCHRFQQFLFEKILQ---------LPGEEQYNPSRGSYLVVPITNNRI 844
Query: 792 DWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQI---- 847
D V F ++ + + + ++ + K++ V T H+ Q
Sbjct: 845 D------VAFMNEHLDSTVPDWQPHPPSSLSSSQV--VDYFKVYGDAVVTAHHDQTKGKS 896
Query: 848 --YCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRR-IFHVQNY 904
Y + V + S F N + TY ++ +R+ + +PLL R+ F N+
Sbjct: 897 SCYYVNAVRPEVTPLSRFP--NPAYATYANYFRDRHNAIIANLSQPLLEVRKESFKTFNF 954
Query: 905 LSK---CRQQKQKEPSKISFELP-------PELCRIIMAPISLSTFYSFTFVPSIMHRLQ 954
L+ R++ E LP PE C + P S+ + ++PSI +RL
Sbjct: 955 LTPKYVNRKEAADEGDGEIQSLPKGSIYFVPEFCEVHRFPASM--WRQAVWIPSIFYRLN 1012
Query: 955 SLLLAVNLKNMLLDHCMQNVTI--PTIK--VLEAITTKKCQE 992
SLLLA L+ + +++ P ++ L+ T+ KCQ+
Sbjct: 1013 SLLLADELRMEIQAKTGLGLSVLPPNLQWEPLQMKTSGKCQQ 1054
>gi|283827860|gb|ADB44075.1| dicer-1 [Marsupenaeus japonicus]
Length = 2482
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 235/539 (43%), Gaps = 119/539 (22%)
Query: 954 QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQ 1013
+ + + + + LL+H + ++ +L+A+T + +LE LET+GDSFLKYA +
Sbjct: 1951 EEMSFSFDFQPDLLNHPGPSPSV----ILQALTMSNANDGVNLERLETIGDSFLKYAITT 2006
Query: 1014 QLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD------PKMWIIP- 1066
L+ TY HEG LS + + +SN L +LG + L + F+ P + +P
Sbjct: 2007 FLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPR 2066
Query: 1067 ------------------GDNSGSYELNDDS---LFNGRKIYVTGRKK------------ 1093
D G ++L D L R + K
Sbjct: 2067 ELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSKNEQATSELMATQN 2126
Query: 1094 -----------------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP 1136
+ K++AD VEALIGA+L+T G L+F+ +GIKV +P
Sbjct: 2127 PHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKV----LP 2182
Query: 1137 YQRQFQVHAERLVNVRHLES-----------------------------LLNYSFRDPSL 1167
+ +L+ HLES + Y+F+D S
Sbjct: 2183 CTLEDSPETGQLIIYGHLESPQSPLYHCPLTDTKKELDLLLSGYQVFEEKIGYTFQDRSY 2242
Query: 1168 LVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN
Sbjct: 2243 LLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNN 2302
Query: 1228 DCYALSSVKHGLHKHILHASHELYKRINITVDSFEK----------LSLGSTFGWESVTS 1277
+A +VK+ HK+ H S L + I V E+
Sbjct: 2303 TIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYYFMEEDECEAAEDIE 2362
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELTE 1331
PKALGD+ ES+AGAIF+DSG + + V+ + M+ E +F P+REL E
Sbjct: 2363 VPKALGDVFESVAGAIFLDSGSSLDAVWS----VYYTMMCREIEQFSGVVPKSPIRELLE 2418
Query: 1332 YCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ KP + GK V+VE+ G + + + + AK A K L+ L+
Sbjct: 2419 M-EPETAKFGKP-ERLVDGKVRVSVEIFGKGSF---SGVGRNYRIAKSTAAKRALRHLK 2472
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 47/282 (16%)
Query: 391 IIFVERVITAIVLQSLLSEL----------LPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
+IFV A ++ LL EL P++ + + + + + KKQ E+
Sbjct: 941 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAE-HKKQEEV 999
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ FR N++V+T +LEEG+DV CNLV+ FDP S++ S GRAR ++ Y ++
Sbjct: 1000 LRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLI 1059
Query: 501 KSG-------DSTTQSRLENYLAS--GN---KMRKEVL-SHASLPCSPLNNHMYGEDFYH 547
D T S + L S G+ +EVL S A+ +P +
Sbjct: 1060 TKNQELSFLHDMATYSAFQQVLVSHCGSVEVGTDREVLSSEANAAHAP-----------Y 1108
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--------ICTLYLPNN 599
+ T++S++ L+ YC++LPSD + + T + + +EM C + LP N
Sbjct: 1109 ITPAAAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDV-EEMEETAGALKYKCKIMLPIN 1167
Query: 600 CPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
P++ I Q + K AA LE C++LHQ+G L D L P
Sbjct: 1168 SPLKGTIEGPWQDKVSLAKMAAALECCRRLHQMGELDDQLQP 1209
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-------PFVAVFLV 75
R YQ+E ++ LK NT+ L + S +T + M+ R A+L R + +
Sbjct: 18 REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P +V + EAI+ +T+L V Y VD W + W ++ +V++MT +L GL
Sbjct: 78 PGLV---RAGEAIQQNTNLAVTTYTRLEQVDGWLPSRWSHTFTEAQVIIMTVDVLEKGLE 134
Query: 136 LSYFKLNMIKVLILDECH 153
+L+M+ +L++ + H
Sbjct: 135 TGLLQLDMLNLLVITDAH 152
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HLN S F + T++K+Y +YG+Q+C +PLL+ GR
Sbjct: 1437 QYFYVAEICTHLNPQSDFP--DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLL 1494
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
++++ ++ K + + + L PELC I P SL + +P+I+
Sbjct: 1495 TPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPFPASL--WRKAVCLPTIL 1552
Query: 951 HRLQSLLLAVNLK 963
+R+ +LLLA L+
Sbjct: 1553 YRINALLLADQLR 1565
>gi|395331143|gb|EJF63525.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1526
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 190/729 (26%), Positives = 316/729 (43%), Gaps = 141/729 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E L+ + ++N ++ L+TGSGKT IA++ ++ Y + S V+ F+ P V LV
Sbjct: 23 RAYQQELLDESKRRNIVIALDTGSGKTHIAVLRVK---YEAERESRKVSWFIAPTVALVE 79
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ+E IK + VG G + W D W+ ++KH ++V TPQ+LLD L Y +
Sbjct: 80 QQSEVIKTAIPVSVGYVSGASEPNQWKDAGLWRGIIAKHRIMVTTPQVLLDALHHGYVDM 139
Query: 142 NM-IKVLILDECHHARGKHQYACIMTEFYHRL-----LETGDSNL-PRIFGMTASPI-KS 193
I +L+ DE HHA GKH Y IM + Y L L T S + P + G+TASP +
Sbjct: 140 GSDISLLVFDEAHHAIGKHPYNMIMKKHYFGLPPRSPLGTSTSRVRPMVLGLTASPTYGA 199
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCA-SESVLSNFIPFSTAKFKFYK-----YDEIPH 247
V + DLE ++S + + + L+ ++ K Y D IP
Sbjct: 200 NVDVA-------FRDLEKNLDSTIRSSRNNRHELAQYVHRPEFKHVIYASPIHVQDGIPS 252
Query: 248 ALYTHLADELAMIELKHTRSLENL--DLNEAQAELIRKKVSKINSTLL------------ 293
Y L +A ++++ S+ L L + Q R++V + S L
Sbjct: 253 VNYKALEVVIAELDIEQDPSVIALRARLAKLQPGDDRRRVDQQLSKALDKKDTFTHKGLR 312
Query: 294 --------YCLSELGVWLA--------LKAAETISCYESDFFAWEQ------LDGFGETI 331
C+ +LG W A +A + + Y + AW++ L
Sbjct: 313 DFARTAADICI-DLGTWAADWYIARVIERAKQAANPYNNIMSAWQEKEKRYLLGILNRVS 371
Query: 332 IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV-----E 386
+ + D Q + LT K+ L++SLL + E
Sbjct: 372 VMEPSEDIEQIVAN----------------------LTPKVRTLVDSLLVEEALFRSMDE 409
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS---------RKKQ 437
+ IIFV R T +VL LL + ++ + G++S + S + Q
Sbjct: 410 EYSGIIFVTRRDTVLVLAELLRRIPETSHLFRIGCLLGSSSSFKRHSFLDITRSMLDESQ 469
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
++++ +F+ G N+IV+TS+ EEG+D+Q+C V+ FD V S+ QSRGRAR + S ++
Sbjct: 470 SDVLRDFKIGDKNLIVSTSVAEEGIDIQACGSVVRFDIPPNVVSWAQSRGRARRKRSSFV 529
Query: 498 LMVKSGD--------STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
+M + T+ R+ +A+ N R++ + AS+ ++ + G + V
Sbjct: 530 IMFDQAEPREVVRKWEETERRM---MAAYNDPRRD--AAASVEEDDFDD-LDGYCEFEVA 583
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN-------------------KEMG 590
STG + T+ ++V + +C+ +P+ G+ P + ++ + G
Sbjct: 584 STGALLTIHTAVPHLNHFCAVIPTGGHEHLVPIYELDPPDYAEGWHALPEHARFTERYTG 643
Query: 591 I--CTLYLPNNCP-----IQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP---DI 640
T+ LP P + +Q EA L+Q G L ++LLP I
Sbjct: 644 PWGATVTLPRALPPHLRKFSVDRIHRTKRRAQQRVAFEAYVALYQAGLLNNHLLPHTSGI 703
Query: 641 VVEKHDAQK 649
EK D K
Sbjct: 704 EPEKEDEVK 712
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 214/460 (46%), Gaps = 75/460 (16%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQN--VTIPTIKVLEAITTKKCQEDFHLESLETL 1002
+PSI+ L L +L+ L QN T+ ++ AIT QE FH + LETL
Sbjct: 985 LLPSILRWLAMALTVHSLRTSLFK---QNPVSTVALRHLVTAITAPAAQERFHYQRLETL 1041
Query: 1003 GDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM 1062
GD+ LK+ S L+ + HEG LS KK+ ++N L + ++ L +I + F P+
Sbjct: 1042 GDTVLKFITSNLLYADFPLWHEGYLSRKKDHAVANVNLARWAVKKGLYRWIIRDRFIPRK 1101
Query: 1063 WI------------IPGDNS--GSYELNDDSLFNGR-KIYVTGR-KKVKSKTVADVVEAL 1106
W I D S G+ +D + NG K G+ + + +K +ADVVE+L
Sbjct: 1102 WKPHYSSAAGAFDEILDDRSREGTPTASDAAAQNGNSKESRKGKAEDLSTKMLADVVESL 1161
Query: 1107 IGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA--------ERLVNVRHLESLL 1158
IGA GG + + + + + + +P + +HA E+L V E ++
Sbjct: 1162 IGAAYEDGGFDRAIDCVTAFNLGLSWKKLP-EYIGAMHAVDDIDDIPEQLALV---EQMI 1217
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYPGLSPGYL 1217
NY F + LV+ALTH SY +RLEFLGDA LD ++ YLY+ + SPGY+
Sbjct: 1218 NYRFARRTFLVQALTHASYQGDFATMSLERLEFLGDAALDMIVVDYLYHAEGKDYSPGYM 1277
Query: 1218 TDMRSASVNNDCYALSSVK---------------HGLH-----------KHILHASHELY 1251
+ A VN+ A + +K HGL + +LH+SH +
Sbjct: 1278 HIKKMAVVNSHILAYTCLKTAVTVESTMPTWSPEHGLEAVDDSQQVYLWQCLLHSSHRVL 1337
Query: 1252 KRINITVDSFEK--------LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCNR 1301
+ N+T ++K L + + W +TS PK + D++ES+ GA++VDS +
Sbjct: 1338 EDQNLTFLRYQKHGAEIADALENDAVYPWAGLTSLQAPKFISDMVESILGAVYVDSFGDL 1397
Query: 1302 EVVFQSIRPL-----LEPMITPETMRFHPVRELTEYCQKN 1336
V Q + L LE ++ + HPV L + ++
Sbjct: 1398 GKVRQVMETLGLMRVLERVVHDDVDALHPVSRLEIWAAQH 1437
>gi|169610828|ref|XP_001798832.1| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
gi|160702165|gb|EAT83689.2| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
Length = 1443
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 179/652 (27%), Positives = 286/652 (43%), Gaps = 112/652 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E A QNTI L+TG
Sbjct: 49 RDYQMELFLRAKMQNTIAVLDTG------------------------------------- 71
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
TD V G MG + TW + + + V+V T Q+L+D + S+ ++
Sbjct: 72 ---------TDQGVEGISGAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMHSFMSIS 122
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
+ +LI DE HHA+ H YA +M ++Y L+T S PRIF MTASP+ K S+E
Sbjct: 123 RMNLLIFDEAHHAKSNHPYARVMKDYYAHELDT--SKRPRIFAMTASPVDVKGQSAEH-V 179
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIEL 262
+ +LETL++S++ T + ++ N I + A+YT L +E L
Sbjct: 180 REAARELETLLHSRIATTSDSALARNSITRPEEEV----------AVYTRLRNEFE-TPL 228
Query: 263 KHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWE 322
+ D+ + I K+ SELG W + Y S FA E
Sbjct: 229 HQKVKAKYGDVAPFRKLFITAKLHA---------SELGRWAS-------DMYWSFAFADE 272
Query: 323 Q---LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE-----KIVC 374
Q L E + D S A + + + + ++ + + L+E K++
Sbjct: 273 QSRKLQIREELKYNRSKRDWSAAELDAQMARLKEATAFVQQYEIGAPTLSEQDLSSKVMK 332
Query: 375 LIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS 433
L L L Y RCI+FVE+ TA +L+ + + + N +G + S
Sbjct: 333 LQYWLNLYYERTTLARCIVFVEKRHTAQLLKLIFDHIGGPNLHCDVLVGINNRAGEENVS 392
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
+ Q +++FRRG +N + ATS+ EEGLD+ CNLV+ FD RT+ ++QSRGRAR +N
Sbjct: 393 LRSQILTLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGRARHRN 452
Query: 494 SDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSH---------ASLPCSPLNNHMYG 542
S YL M+++ + RL N N MR+ + L+H L + ++
Sbjct: 453 SKYLHMLEAENKEHTERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAELIALEDKLFP 512
Query: 543 EDFYHVESTGTIATLSSSVSLIYFYCSRLPS-DGYFKPTPKFHINKEMG----------- 590
Y E +G T SS+S++ + + PS D P + +N ++
Sbjct: 513 S--YTDEKSGAKLTYRSSLSILSHFVATYPSPDHNTMAQPTYVVNPKISDDPRDPQRNGF 570
Query: 591 ICTLYLPNNCPIQTVIAQ-GNIKTL-KQAACLEACKKLHQIGALTDNLLPDI 640
+C + LP +CPI +++ Q + KT+ K +A + C +L + L + LLP I
Sbjct: 571 VCEVILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLPTI 622
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 210/483 (43%), Gaps = 82/483 (16%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRI--IMAPISLSTFYSFTFVP 947
+P+L +I +N+L+ +++KE + + + PE I + P + + +P
Sbjct: 866 QPVLQVEKIPFRRNHLANVEDKEKKELANLETYICPEPLHISNLATPFVVMCY----VLP 921
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH------------ 995
+I+HR +S L+A++ ++L ++ + LEA+T + H
Sbjct: 922 AIIHRFESYLIALDACDVL------DLKVSPALALEALTKDSDNSEEHGEEKINFKSGMG 975
Query: 996 --LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQK----- 1048
E LE LGD FLK A S +F +E V++ ++ N L + +K
Sbjct: 976 PNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKVASA 1035
Query: 1049 --------LPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
L ++RT++F + W G L L + ++ + K+VA
Sbjct: 1036 NGTERDLQLYKYVRTDAFSRRNWY----PEGLKLLRGKGLKKTEEDWLNVTHNLGDKSVA 1091
Query: 1101 DVVEALIGA-FLS--TGG--------ENVGLIFL-----DRIGIK-VDFVNVPYQRQFQV 1143
DV EA IGA F+ GG E V + L D + K D+ + ++Q
Sbjct: 1092 DVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLMEKWTDYYAAYTKPKYQT 1151
Query: 1144 H---AERLVNVRHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLD 1198
A +L +E Y FR P LL A H S +M IP YQRLEFLGD++LD
Sbjct: 1152 AGATATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIP-SYQRLEFLGDSLLD 1210
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
++L+ KYP P +LT+ ++ V+N ++ +++ V
Sbjct: 1211 MAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVQIRDYVYE----------------V 1254
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+ E+ + G+ W SV+ PK L D+IE+ AIFVDS + VV + L+P
Sbjct: 1255 EEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVVQKFFDLHLKPFFLD 1314
Query: 1319 ETM 1321
T+
Sbjct: 1315 MTL 1317
>gi|327303976|ref|XP_003236680.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
gi|326462022|gb|EGD87475.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
Length = 1460
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 180/666 (27%), Positives = 301/666 (45%), Gaps = 83/666 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E LE ++KQN IV ++TGSGKT IAI+ +R L R + + FL PKV L
Sbjct: 83 RGYQREMLEASIKQNIIVAMDTGSGKTQIAILRIRHE--LERCSNDKLVWFLAPKVPLAE 140
Query: 83 QQAEAIKMHTDLKVGKYW-GDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ AI K G ++ W W + ++V TPQILLD L +
Sbjct: 141 QQYRAISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFIT 200
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYH----RLLETGDSNLPRIFGMTASPIKSKVS 196
L I +L+ DE HH IM FYH +L ET D LP I G+TASP +
Sbjct: 201 LRRIALLVFDEAHHCVKASPENKIMKNFYHARIDQLSETND--LPSILGLTASPTSRLIE 258
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCA---SESVLSNFIPFSTAKFKFYKYDEIPHAL---Y 250
S + LE +++ T A E + IP K + K IPH + Y
Sbjct: 259 DS-------LRQLEQNLDAFCKTPAIHREEMMQYVHIP-ELLKVSYQKDSIIPHNMKMKY 310
Query: 251 THLADELAMIE---------LKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGV 301
H+ D++ + +S E A+ ++ + + + + ELG
Sbjct: 311 LHMLDDIDIESDPFFQRYKGKTDRKSTERFLCALARKTPCLDQLKRCFTKVSHMYGELGH 370
Query: 302 WLALKAAETI---------SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAE 352
W + I + ++ W++ D F +A + +V
Sbjct: 371 WASSTYISEIYRRTREKRAKLVDQNWSEWDRDDS-------SFMCNALEPVV-------- 415
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+I + +N ++ K+ L++ LL R IIFVE+ TA++L L++ P
Sbjct: 416 -AIMGERCWNSTPDAVSPKVEHLVD-LLSSELTGASRGIIFVEQRATAVMLSHLIAHY-P 472
Query: 413 RHCTWKTKYIAGNNSG-------IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
K+ Y GN++ + + +++ + G N++VATS+LEEG+DV
Sbjct: 473 ELAHIKSDYFLGNSAFSDRKADITEISKPGDMKDSIDDLKSGKKNLLVATSVLEEGIDVS 532
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
+C+LV+ FDP + + SF+Q RGRAR ++S +++ D+ T +++ A + M++
Sbjct: 533 ACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAEDDTAT---YKDWEAMEDIMKERY 589
Query: 526 LSHASLP---CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
LS+ + + + +ESTG + TL+++ + + +CS +P + + P
Sbjct: 590 LSNKEFIDRLQEEDDEDEIEYESFRIESTGALLTLANARAHLSHFCSTIPCE-FTDTQPD 648
Query: 583 FHIN----KEMGICTLYLPNNCPIQ-----TVIAQGNIKTLKQAACLEACKKLHQIGALT 633
F I+ K+M + LP +Q + A K K+ A +A +L+++G +
Sbjct: 649 FIISKSGIKDMLTAKVLLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYEVGLVN 708
Query: 634 DNLLPD 639
D+L+P+
Sbjct: 709 DHLMPE 714
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 215/464 (46%), Gaps = 70/464 (15%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKV 981
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 956 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQL----V 1009
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT +ED + + LE LGDS LK AS QL + HEG+LS KK+ I+SN+ L
Sbjct: 1010 LTAITAASAREDINYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1069
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
K + L FI T F W P NS N KI +++ +KT+AD
Sbjct: 1070 KAAVDTGLDQFILTTCFTGAKW-RPLYNSTYTN-------NAGKIGEKSTRELSTKTLAD 1121
Query: 1102 VVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVN---------VR 1152
VVE+LIGA + GGEN L L+ ++++ +P + ++ + ++ +
Sbjct: 1122 VVESLIGAAIIDGGENKVLHCLELFLPEINW--LPSGERIEILYDSALDFNDDCPRDILS 1179
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+E L+ YSF +LL +L+H S P YQRLEFLGD++LD ++T L+ +
Sbjct: 1180 KVEPLIEYSFTKKALLAASLSHPSN--PISGMTYQRLEFLGDSILDNIVTRALFRCKKEI 1237
Query: 1213 SPGYLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHILHA 1246
+ +R+A VN D A S+ + L +++ H+
Sbjct: 1238 PHQDMHLIRTALVNADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMSHS 1297
Query: 1247 SHELYKRINITVDSFEK--------LSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVD 1296
S ++ + +FE+ L G+ + W S + PK DIIES+ GAIF+D
Sbjct: 1298 STDIVETQQAMARTFEELRGQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIFID 1357
Query: 1297 S-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTEYCQ 1334
S C + + + L+ ++ + + F HP + L Q
Sbjct: 1358 SRGSILACQKFLTRIGLMDYLQRVLEDDGIDFMHPKQRLGVVAQ 1401
>gi|167046020|gb|ABZ10541.1| dicer-like protein B [Trichoplax adhaerens]
Length = 357
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 196/359 (54%), Gaps = 43/359 (11%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L+A+T + +DF+LE+LE LGDS+LKYA S F +Y HEG LS K +I+SN L
Sbjct: 1 LKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG-------DNSGSYE-LNDDSLFNGRKIYVTGRK 1092
++G + LPG+I + D +W+ PG D+ G E L+ +L +++ T +
Sbjct: 61 QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPT--Q 118
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFL-DRIGIKV-----------DFVNVPYQRQ 1140
K+K+K +ADV+EAL+G L GEN F+ + +GIKV D +
Sbjct: 119 KLKNKCIADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDDDARKEISKI 178
Query: 1141 FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY---MLPEIPRCYQRLEFLGDAVL 1197
+ H N++ LE++L YSF+D LL+ ALTH +Y + E CYQRLEFLGDA+L
Sbjct: 179 YNAH-----NLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAIL 233
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
Y++ + Y+ P L D AS+ N+ A+ ++ +G+HK+ + S L+ +IN
Sbjct: 234 QYIVVRHCYHANNNYKPADLHDFVEASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQL 293
Query: 1258 VD------------SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ S E+ +L + + PK LGD+ ESL GAIF+D G + EVV
Sbjct: 294 LQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVV 352
>gi|350855011|emb|CAZ36047.2| dicer-1, putative [Schistosoma mansoni]
Length = 2319
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 240/555 (43%), Gaps = 152/555 (27%)
Query: 981 VLEAITTKKCQEDF-HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+L+A+T C DF +LE +ET+GDSFLK+ + L+ TY HEG LS + RI+ N+
Sbjct: 1751 ILQALTMS-CSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSN 1809
Query: 1040 LCKLGCEQKL-----------------PGF------------------------------ 1052
L +LG + L PG+
Sbjct: 1810 LYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIWSTDTL 1869
Query: 1053 -----IRTESFDPKMWIIPGDNS--GSYELNDDSLFNGRKI----YVTGRKKVKSKTVAD 1101
+R F + I P +N ++ ND + + + + +T ++ + K++AD
Sbjct: 1870 MDDEVLRNIDFIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIPDKSIAD 1929
Query: 1102 VVEALIGAFLSTGGENVGLIFLDRIGI--------------------KVDFVNVPYQRQF 1141
VEALIG +L+T GE L + GI K ++++ R
Sbjct: 1930 CVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDTDENRAN 1989
Query: 1142 QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY------------------MLPEIP 1183
A + LES LNY+F+DPSLL++A TH SY M
Sbjct: 1990 LNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNLMFSTDL 2049
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN+ +A +V+ GLHK+
Sbjct: 2050 DCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLHKYF 2109
Query: 1244 LHASHELYKRINITV---------------------------DSFEKLSLGSTFGWESVT 1276
+S +L I++ V ++E+ S +
Sbjct: 2110 RASSPQLLHTIDVFVRYQKDVAKDDLDFITNESENQSSKPQHQTYEQHLSKSGKSNNANN 2169
Query: 1277 SFP------------------KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+ P KAL DI ESLAGAIF+DS + + V+Q P+++ I
Sbjct: 2170 TIPTNTGHLTTNRLSDDVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKERIER 2229
Query: 1319 ET--MRFHPVRELTEYCQKNHFSMKKPVASR-ISGKAAVTVEVQANGRLFEHTFLDADKK 1375
T + PVR+L E + K A R + G+ +V V GR + + + +
Sbjct: 2230 YTACIPKSPVRQLLELEPE---GTKFERARRMVDGRISVCAHVLGKGRFYG---VGRNYR 2283
Query: 1376 TAKKVACKEVLKSLR 1390
AK +A K L+ LR
Sbjct: 2284 LAKSLAAKRALRVLR 2298
Score = 43.5 bits (101), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 437 QNEIVEEFRRGLVNVIVAT-----SILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q E + FRRG +N++VAT ++ G ++ CNLVI ++ ++ S+ R+R+
Sbjct: 629 QEETITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRL 688
Query: 492 QN 493
N
Sbjct: 689 VN 690
>gi|408394282|gb|EKJ73491.1| hypothetical protein FPSE_06330 [Fusarium pseudograminearum CS3096]
Length = 1451
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 181/661 (27%), Positives = 292/661 (44%), Gaps = 75/661 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E LE ++K+N IV ++TGSGKT +A+M ++ + L +P V+ + K V +
Sbjct: 79 RGYQREMLEQSIKRNVIVAMDTGSGKTQVAVMRIQ---HELDTCAPDKIVWFLGKTVSLC 135
Query: 83 QQAEAI--KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
+Q ++ + + + G + +D W W ++ ++V T IL D L ++ K
Sbjct: 136 EQQYSVVQRQMPSVSMKLLTGQLNIDAWSEDVWPRILNGTRIIVSTFDILRDALDHAFVK 195
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+NM+ +++ DE H+ IM FYH G +P I G+TASPI+SK + E
Sbjct: 196 MNMLSLIVFDEVHNCVKNSSGRKIMVNFYHEHKNAG-MPVPAILGLTASPIQSKSNHDE- 253
Query: 201 DYWQKIHDLETLMNSKVYT-CASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADEL 257
I +LE M+S T + L + Y +E P L L E
Sbjct: 254 -----ILELEVTMDSVCITPTINRKELLQHVNKPNLSRVLYDVEEHPTRTPLMQTLQSEY 308
Query: 258 AMIELKHTRSL---------------ENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+ +++ S+ E L L +K++ + + L ELG W
Sbjct: 309 SAMDITQDPSIIKTKQLIAKGEKTGPEILSLLMKHGTFSQKQLKSLWNKSKDILDELGPW 368
Query: 303 LALK-AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
A K +E +S + L F + F S TY+ +
Sbjct: 369 AADKYISELVSLF---------LKRFDSPMT--FNESWSNEDRTYLAGHLRQIAASPHQP 417
Query: 362 NL-DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
L D L +K LI+ LL ED+ IIFV A VL ++L E H + +
Sbjct: 418 KLPDRHNLADKTNKLIQELLA--ADEDVVGIIFVRSRAAANVLCAILRE----HPEIRQR 471
Query: 421 YIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
Y G+ G +KQN + + +F+ G +N++V+TS+LEEG+DV CNLV
Sbjct: 472 YRVGSVVGSAANKIRKQNIYEYLPGATADTLRDFKTGAINLLVSTSVLEEGIDVAVCNLV 531
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS-GDSTTQSRLENYLASGNKMRKEVLSHA 529
I FD + T+ S IQ RGRAR Q S +++ +S D+ LE + S + +E L
Sbjct: 532 ICFDETTTLKSHIQRRGRARKQKSKMIVLARSTSDAREWDSLERDMKSRYEQEREELDTL 591
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-E 588
+ + Y V+ +G L +S + +C+++ Y P + +K E
Sbjct: 592 EIEARTEATSHFA---YTVKKSGARLDLENSRQHLEHFCNKVFHRDYVDQRPVYIFHKTE 648
Query: 589 MG------ICTLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLL 637
+G T+ LP+ P ++ +G ++ K A A A LHQ G ++D+LL
Sbjct: 649 LGSAPPTFSATVTLPSGLPKHLRRCQGRGGWRSEKNAMKEAAFHAFVILHQEGLVSDHLL 708
Query: 638 P 638
P
Sbjct: 709 P 709
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 153/510 (30%), Positives = 236/510 (46%), Gaps = 80/510 (15%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLG 1003
+PSI+H L+ L+A L + LL V I ++ V+EAI+++ E E +E LG
Sbjct: 955 LIPSIIHELEVQLIANELSSTLL----APVGITDLQLVIEAISSRSAAEPVDYERIEFLG 1010
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DS LKY Q + + EGLL+ K+R++SN L ++ E L FI +++F W
Sbjct: 1011 DSVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKW 1070
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--- 1120
L D + + + R + KT+ADVVEAL+GA GG + L
Sbjct: 1071 ---------RPLYRDEFLDKKPVDGVSRF-IGPKTLADVVEALVGASYQDGGISKALECI 1120
Query: 1121 -IFLDRIGIKVDFVNVPYQRQFQVHAERL-----VNVRHLESLLNYSFRDPSLLVEALTH 1174
IFL G K ++ + R A + LE L+ Y+F SLL+EA+TH
Sbjct: 1121 KIFL---GTKCNWHDDKVARCILFRAATSDVPLPPTMEPLEELIGYTFEKKSLLIEAMTH 1177
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
GSY R Y++LEFLGDAVLDY++ ++ P + G L +++A N D A ++
Sbjct: 1178 GSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMANADFLAFTN 1237
Query: 1235 VKHGLH----------------------KHILHASHELYKRINITVDSFEKL-------- 1264
++HGL K + H+S E+ + +N T FE L
Sbjct: 1238 MQHGLRRPEVAINDDGEPVSTEVSLPIWKFMRHSSPEMGRIMNETQARFESLQGEINEAR 1297
Query: 1265 SLGSTFGWESVTSF-PKAL-GDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITP 1318
+ G + W + PK DI E+ GAI+VDSG C + + P L+ +++
Sbjct: 1298 TNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSGDIEVCTAFLHKFGVLPYLDRILSE 1357
Query: 1319 ETMRFHPVRELTEYC--QK---NHFSMKKP---------VASRISGKAAVTV-EVQANGR 1363
HP EL + QK ++ ++ P V R+ G + + +V+A +
Sbjct: 1358 NIHVQHPKEELAKLAIDQKMTYDYTAVDGPIKEYLCTAKVGDRVVGVVSGALNKVEAMTK 1417
Query: 1364 LFEH--TFLDADKKTAKKVACKEVLKSLRA 1391
E L A++K A+K A EV + L A
Sbjct: 1418 AAEEGVNLLSAEQKRAEKAAQDEVARFLVA 1447
>gi|121714731|ref|XP_001274976.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
gi|158706439|sp|A1C9M6.1|DCL2_ASPCL RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119403130|gb|EAW13550.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
Length = 1389
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 180/673 (26%), Positives = 306/673 (45%), Gaps = 94/673 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
ARNYQLE LE ++K+N IV ++TGSGKT IA+ LR A L P + FL P V L
Sbjct: 16 ARNYQLEMLEASMKENIIVAMDTGSGKTHIAV--LRIKAELDSCPPDKIIWFLAPTVALC 73
Query: 82 PQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ + I + ++ G V+ W + A W + V+V T +L D L +
Sbjct: 74 TQQHKVIASNLPAVQTRTLTGLDKVELWTEQAIWDAILKDVRVVVSTYAVLADALSHGFM 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKSKVSSS 198
+++ + ++I DE HH KH IM +FYH + G S +PRI G+TASP+ V S+
Sbjct: 134 RMSRLALIIFDEAHHCMRKHAANKIMQDFYHPTVSKFGPSAVPRIMGLTASPV---VRSN 190
Query: 199 EQDYWQKIHDLETLMNSKVYTC-ASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
++ + +ET +++ T A L F K Y+ + P L
Sbjct: 191 REE----LFTIETNLDAVCKTPRAHRQELLKFSHRPELKQLLYEPPD-PMGLQVSSQTLR 245
Query: 258 AMIELKHTRSLEN-----------LDLNEAQAELI------RKKVSKINSTLLYCLSELG 300
A+IE T +E+ LD + L+ R+++ + + ELG
Sbjct: 246 ALIEAWETLDIEDDPYVKRLRKSSLDGGALEKALMTGKTFCREQLKRFVDRSRHIFEELG 305
Query: 301 VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGS-DASQALVTYVPSGAEWSIGDDS 359
W A D++ + + + + + D +A Y+ S D
Sbjct: 306 EWAA------------DYYIYTSIQHLKTRVQTSYMTGDWDEAERAYLVSFLSKLPAADI 353
Query: 360 KFNL-DSGLLTEKIVCLIESLLEYRGVED---IRCIIFVERVITAIVLQSLLSELLPRHC 415
+ L D+ L +I +E+L+ + D +IFV++ T S++++LL H
Sbjct: 354 QITLSDAACL--RISPKLEALIGFLDAMDDPEFSGLIFVKQRATV----SVMTDLLAVHP 407
Query: 416 TWKTKYIAGNNSGIQCQSRKK-----------QNEIVEEFRRGLVNVIVATSILEEGLDV 464
+ ++ + G S K Q +++FR G N+I+AT +LEEG+D+
Sbjct: 408 RTRERFRSAAYVGWSNSSGSKDFLGNLLSMHGQLSTLDDFRSGHKNLIIATDVLEEGIDI 467
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST---------TQSRLENYL 515
+C++V+ +D + SF+Q RGRAR + S Y +M + DS Q+ +E Y
Sbjct: 468 SACSVVVCYDKPPNLKSFVQRRGRARQKQSTYAIMFPAEDSAFDLAKWQTLEQAMIEAYQ 527
Query: 516 ASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
++ +++ +N + + + VEST + T ++++ ++ +C+ LPS
Sbjct: 528 DDERHLQ------SAIELERVNEEVV--ERFTVESTSAVLTADTAMAHLHHFCAVLPSQP 579
Query: 576 YFKPTPKFHINKEM-----GICTLYLPNNCPIQTVIAQGN--IKTLKQA---ACLEACKK 625
Y P F + ++ GI + LPN + ++G +T + A A +A K
Sbjct: 580 YVDMRPVFSVETDIANLRRGI--VILPNCVHPKVRRSEGQRWWRTERAAMKEAAFQAYKS 637
Query: 626 LHQIGALTDNLLP 638
L++ G + DNLLP
Sbjct: 638 LYEFGLVNDNLLP 650
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 206/456 (45%), Gaps = 66/456 (14%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQK---EPSKISFELPPELCRIIMAPISLSTFYSFTFV 946
+P R + H Q +K + ++ EP + + C I P S + F V
Sbjct: 850 DPFPRRRNLLHRQTLATKKLENDKEDTPEPVNKMRTVAADQCTIDRLPFSNAILGLFISV 909
Query: 947 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDS 1005
++ +L++ L+A L +L ++V + + ++ AI+ Q + + E LGDS
Sbjct: 910 --VVQQLETELIATKLYETIL----RDVGFTSTQHIITAISAPSAQALTNYQRYEFLGDS 963
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII 1065
LK++ S QLF + N HEG LS ++ I+ N L K + L F+ T+ F P+ W
Sbjct: 964 ILKFSVSCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSA 1023
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
P L + R V G+++V SK +ADVVEALIGA GG + R
Sbjct: 1024 P-------------LISERLERVAGKRQVSSKVLADVVEALIGAAYMDGGHAAAQACIRR 1070
Query: 1126 IGIKVDFVNVPYQ---RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 1182
+++ ++ + R R L+ ++Y+F + SLLVEALTH S
Sbjct: 1071 FLPEINLHSLDTRTLSRSVAPEGARQTIHDRLKRHISYTFENESLLVEALTHPSCDYDAS 1130
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
+ YQRLEFLGDAVLD +I ++N + G++T ++ A VN + A ++ + +
Sbjct: 1131 TQSYQRLEFLGDAVLDMIIVSAIFNHPVQMPQGHMTKIKHALVNANLLAFLCMEFAIPEE 1190
Query: 1243 ILHASHELYKRINITVDSFEKL--------------------SLG--------------- 1267
AS E + V S E+L SL
Sbjct: 1191 --RASVEQISTLQFEVISNEELVELWRFMRYRGLDLNNARDASLARHRALRDEILHSLQH 1248
Query: 1268 -STFGWESVT--SFPKALGDIIESLAGAIFVDSGCN 1300
+ W++++ S K DI+ES+ GAIFVDSG +
Sbjct: 1249 DPHYPWQALSRLSADKFFSDIMESILGAIFVDSGGD 1284
>gi|37266499|gb|AAQ90464.1| Dicer1 [Danio rerio]
Length = 1243
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 177/341 (51%), Gaps = 50/341 (14%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------DFVNVPY 1137
+ K++AD VEAL+G +L++ GE +FL +G+KV ++ +P
Sbjct: 908 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 967
Query: 1138 QRQFQ-VHAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
+ F+ AER +N + ES +NY+F++ + L++A TH SY I CYQRLEF
Sbjct: 968 RCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1027
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+ S EL+
Sbjct: 1028 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1087
Query: 1252 KRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDIIESLAGAIFVD 1296
+D F + L G +S PKA+GDI ESLAGAI++D
Sbjct: 1088 H----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMD 1143
Query: 1297 SGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEY-CQKNHFSMKKPVASRISGKAA 1353
SG + E V+Q P++ P+I + PVREL E + FS P GK
Sbjct: 1144 SGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVR 1200
Query: 1354 VTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 1201 VTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 1238
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 657 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 716
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDD---SLFNGR 1084
+LG ++ LP + FDP + W+ PG D S + + + D L NG+
Sbjct: 717 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKWDSDENKDLANGK 769
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPK---FHINKEMGICTLYLPNNCPIQTVIA---QG 609
T+++++ + YC+RLPSD + PK +N TL+LP N P++ +
Sbjct: 1 TMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRSTLFLPINSPLRVPVTGPVMN 60
Query: 610 NIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ ++A L C+KLH+IG L D+L+P
Sbjct: 61 CARLAEKAVALLCCEKLHKIGELDDHLMP 89
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 673 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 713
>gi|158706440|sp|P0C5H7.1|DCL2_EMENI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1429
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 180/655 (27%), Positives = 286/655 (43%), Gaps = 92/655 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR+YQLE E +LK N IV + TGSGKT IA++ + + L + FL P V L
Sbjct: 14 ARSYQLEMFEASLKGNIIVVMGTGSGKTQIALLRI---IHELENSDGKLIWFLAPTVPLC 70
Query: 82 PQQAEAIKMHTD-LKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ I H +K G V+ W + A W + +V+V TP +L D + +
Sbjct: 71 LQQHRVISQHIPAVKSRTLLGSDKVELWTEQAVWDAVLEGLQVIVSTPAVLHDAMTHGFV 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLL-ETGDSNLPRIFGMTASPIKSKVSSS 198
+++ + +LI DE HH KH IM FYH L E G +PRI G+TAS S+
Sbjct: 131 RISRLGLLIFDEAHHCIRKHPTNMIMRNFYHPALQEYGPGAVPRILGLTASAGSSR---- 186
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+ + +E +NS C + + ++ E+ LYT L E A
Sbjct: 187 -----EGLQTIEMNLNS---VCTTPQAHRQEL------LEYTHMPELRRVLYTPLMKENA 232
Query: 259 MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA---LKAAETISCYE 315
L +L+ L E ++ ++ ELG+W A ++A ++
Sbjct: 233 --SLWEGSTLQK--LLERDNTYCSGQMKTFVCKAVHIFQELGIWAAEYFIRA--SVEELL 286
Query: 316 SDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCL 375
S + ++D D + LV + I S D ++ K L
Sbjct: 287 SHAYVHSKID---------LDYDEREYLVNILSKSPVPDIDVHSTDPKDFP-VSPKFEAL 336
Query: 376 IESLLEYRGVEDIR--CIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS 433
I L+ EDI +IFVE+ V+ LLS H + + ++ G+ G+ +
Sbjct: 337 ISFLM---STEDINFSGLIFVEQRAAVTVMSYLLST----HPSTRDRFRTGSFIGMSNST 389
Query: 434 RKK-----------QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
+K Q + +++FR G N+IVAT +L+EG+DV +C++VI ++ + SF
Sbjct: 390 NRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESF 449
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTT--------QSRLENYLASGNKMRKEVLSHASLPCS 534
IQ RGRAR QNS Y +M+ + D + + +E + +E+ + SL
Sbjct: 450 IQRRGRARRQNSTYSMMLSTEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGSL--- 506
Query: 535 PLNNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG- 590
ED + V STG I T ++ + +C LP Y + P+F + G
Sbjct: 507 -------DEDVCTRFCVRSTGAILTAEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGG 559
Query: 591 --ICTLYLPNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
+ LP++ + A+G + K+ A A K L++ G + DNLLP
Sbjct: 560 LLRAKVILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLP 614
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 201/490 (41%), Gaps = 89/490 (18%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQ--QKQ----KEPSKISFELPPELCRIIMA 933
RYG L F R +G Y SK R Q+Q K P++ P RI+ A
Sbjct: 783 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRILSA 842
Query: 934 --------PISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVLEA 984
P S + F F +P I+ RL++ L+A L + +L D Q++ V+ A
Sbjct: 843 SHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDLR----HVITA 896
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
IT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 897 ITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAA 956
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR-KKVKSKTVADVV 1103
+Q L +I + F P+ W P K+Y + + + +K +ADVV
Sbjct: 957 LDQGLDAYIISNRFTPRKWSAP--------------LISEKLYASASTRSMSAKVLADVV 1002
Query: 1104 EALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER--LVNVRHLESL 1157
EALIGA GG ++ + FL I + + P ++ L+ +LE+
Sbjct: 1003 EALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENH 1062
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+ Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G +
Sbjct: 1063 IGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEM 1122
Query: 1218 TDMRSASVNNDCYAL--------------SSVKHG------------------------- 1238
T ++ A VN A S+ G
Sbjct: 1123 TKIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSP 1182
Query: 1239 -----LHKHILHASHELYKRINITVDS-FEKLSLGSTFGWE--SVTSFPKALGDIIESLA 1290
LH S R N+ S L+ + + W S K D++ES+
Sbjct: 1183 SRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESII 1242
Query: 1291 GAIFVDSGCN 1300
GAIFVDSG +
Sbjct: 1243 GAIFVDSGGD 1252
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 1148 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 872 LVATRLCETVLRDIQFQDLRHVITAIT---MPLAQAPTDYQRYEFFGDSVLKFTVAASLF 928
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
P GYLT+ A V N +++ GL +I+ S+ R EKL
Sbjct: 929 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYII--SNRFTPRKWSAPLISEKLYA 986
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
++ + + K L D++E+L GA ++D G ++
Sbjct: 987 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 1017
>gi|358370394|dbj|GAA87005.1| dicer-like protein 2-1 [Aspergillus kawachii IFO 4308]
Length = 1396
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 171/662 (25%), Positives = 302/662 (45%), Gaps = 76/662 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E E +LK+N IV + TGSGKT IA LLR L P + FL P V L
Sbjct: 20 RSYQVEMFEASLKENIIVTMGTGSGKTHIA--LLRIMKELESNPHKLIW-FLTPTVALCL 76
Query: 83 QQAE-------AIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGL 134
QQ + A++ T + K V+ W + W + + +V+V T +L D +
Sbjct: 77 QQFKFISDNIPAVRARTLTSLDK------VELWTEQPIWDAILKEMQVVVSTHAVLADAM 130
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKS 193
+ K+ + ++I DE HH +H IM +FYH LE G +P+I G+TASP+
Sbjct: 131 SHGFVKITQLGLIIFDEAHHCMRRHPANKIMEDFYHPALERHGAEAVPKILGLTASPV-- 188
Query: 194 KVSSSEQDYWQKIHDLET------LMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
V S++Q+ + +L+ + S++ T L + F D++
Sbjct: 189 -VRSNKQELLKVESNLDAVCKTPRIHRSELMTHTHRPHLQQIL------FTPVLLDDLQA 241
Query: 248 ALYT--HLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL-- 303
T L + + L+ ++ L + ++K + S YC +L +
Sbjct: 242 GSRTLKALVNAWTSMRLEDDPYIKKLRKSPLDGRALQKV---LESGKTYCNDQLKRFTTR 298
Query: 304 ALKAAETISCYESDFFAW---EQLDGFGETIIKKFG-SDASQALVTYVPSGAEWSIGDDS 359
+L E + + +D+F + EQL + + G +D +A + + S D +
Sbjct: 299 SLHIFEELGEWAADYFIYASVEQLKTRADNSVDSMGWTDEEKAYLLDIVSKLPTPSIDLT 358
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLPRH---C 415
+ D ++ K L+E L+ +G + +IF ++ T V++ LLS + +H C
Sbjct: 359 PSDPDRIPISPKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRC 417
Query: 416 TWKTKYIAGNNSGI--QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
+ G + + + + Q + + EFR G N+I+AT +LEEG+D+ +C++V+ +
Sbjct: 418 ASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCY 477
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---------QSRLENYLASGNKMRKE 524
D + SF+Q RGRAR + S Y +M + D ++ Q+ +E Y ++R
Sbjct: 478 DKPPNLKSFVQRRGRARHRQSTYAIMFSTDDESSALSKWEDLEQAMIEAYEDDERRLRD- 536
Query: 525 VLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH 584
+ +N + + V STG + T ++V+ + +C+ LP Y P+F
Sbjct: 537 -----AWALEAINEEVV--ERLEVPSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFS 589
Query: 585 INKEMGIC---TLYLPNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNL 636
K+ T+ LP+ QG + ++ A +A K+L++ G L+D+L
Sbjct: 590 FEKDDADLLRGTVTLPSCVHPGVRRTQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHL 649
Query: 637 LP 638
LP
Sbjct: 650 LP 651
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 195/453 (43%), Gaps = 71/453 (15%)
Query: 896 RRIFHVQNYLSKCRQQKQKEP---SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
R + H Q +K Q + P SKI L E C I P + + F F V I+ R
Sbjct: 854 RNLLHRQTLAAK--QLDTETPDNSSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 908
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
L++ L+A L +L +++ +I+ V+ AIT Q + + E GDS LK+
Sbjct: 909 LEATLVATRLCETIL----RDLEFSSIRHVITAITAPSAQSLTNYQRYEFFGDSVLKFTV 964
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S QLF + N HEG LS ++ I+ N+ L + + L FI + F P+ W P
Sbjct: 965 SCQLFFQHPNWHEGYLSQGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWTAP----- 1019
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLI----FLDRI 1126
KI +T +++ S K +ADVVEALIGA GG FL +
Sbjct: 1020 ---------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEV 1070
Query: 1127 GIK-VDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
++ +D + + +N HL + + Y+F SLLVE+LTH S +
Sbjct: 1071 NLEHIDRTTTTAPSTPEGTTKHTLNDDHLMTHIGYTFTHKSLLVESLTHPSCQFDTTTQS 1130
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL------------- 1232
YQRLEFLGDAVLD I L + + G +T ++ A VN + A
Sbjct: 1131 YQRLEFLGDAVLDMAIMSTLLSHPHEIPQGQMTKIKHAVVNANLLAFFCMEFALVEKRST 1190
Query: 1233 -------------SSVKHGLH---------KHILHA-SHELYKRINITVDSFEKLSLGST 1269
SS H L H+ A L + ++ L +
Sbjct: 1191 VQITPSGTASLNPSSTDHKLELWRFMRYQGAHLQTARDAALARHASLRKSIIHGLQHSPS 1250
Query: 1270 FGWESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
+ W+ ++ K DIIES+ GAIF+DS N
Sbjct: 1251 YPWKYLSQLNADKFFSDIIESILGAIFIDSHGN 1283
>gi|317035030|ref|XP_001400925.2| ATP-dependent helicase dcl2 [Aspergillus niger CBS 513.88]
Length = 1407
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 174/657 (26%), Positives = 302/657 (45%), Gaps = 66/657 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E E +LK+N IV + TGSGKT IA LLR L P + FL P V L
Sbjct: 20 RSYQVEMFEASLKENIIVTMGTGSGKTHIA--LLRIIKELESNPHKLI-WFLTPTVALCL 76
Query: 83 QQAE-------AIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGL 134
QQ + A++ T + K V+ W + W + + +V+V T +L D +
Sbjct: 77 QQFKFLSDNIPAVRARTLTSLDK------VELWTEQPVWDAILKEMQVVVSTHAVLADAM 130
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKS 193
+ K+ + ++I DE HH +H IM +FYH LE G +P+I G+TASP+
Sbjct: 131 SHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTASPV-- 188
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIP-FSTAKFKFYKYDEIPHALYT- 251
V S+ Q+ + +L+ + + T SE + P F D++ T
Sbjct: 189 -VRSNRQELLKIESNLDAVCKTP-RTHRSELMTHTHRPHLQQILFTPVLLDDLQVGSKTL 246
Query: 252 -HLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL--ALKAA 308
L + L+ ++ L + ++K + S YC +L + +L
Sbjct: 247 KALVSAWTSLRLEDDPYIKKLRKSPLDGRALQKV---LESGKTYCNDQLKRFATRSLHIF 303
Query: 309 ETISCYESDFF---AWEQLDGFGETIIKKFG-SDASQALVTYVPSGAEWSIGDDSKFNLD 364
E + + +D+F + EQL G +D +A + + S D + + D
Sbjct: 304 EELGEWAADYFIHASIEQLKARAGNSADTMGWTDEEKAYLLDIVSKLPIPNIDLTHSDPD 363
Query: 365 SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLPRH---CTWKTK 420
++ K L+E L+ +G + +IF ++ T V++ LLS + +H C
Sbjct: 364 RIPISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRCASFVG 422
Query: 421 YIAGNNSGI--QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
+ G + + + + Q + + EFR G N+I+AT +LEEG+D+ +C++V+ FD
Sbjct: 423 WSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPN 482
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTT---------QSRLENYLASGNKMRKEVLSHA 529
+ SF+Q RGRAR + S Y +M + D ++ Q+ +E Y ++R+
Sbjct: 483 LKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAYEDDERRLRE------ 536
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE- 588
+ +N + + V+STG + T ++V+ + +C+ LP Y P+F K+
Sbjct: 537 AWALEAINEEVV--ERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSYEKDD 594
Query: 589 ----MGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
G TL + ++ + Q +T + A A +A K+L++ G L+D+LLP
Sbjct: 595 ADLLRGTVTLPSCVHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLP 651
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 199/451 (44%), Gaps = 71/451 (15%)
Query: 896 RRIFHVQNYLSKCRQQKQKEP---SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
R + H Q +K Q + P SKI L E C I P + + F F V I+ R
Sbjct: 854 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 908
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
L++ L+A L +L +++ +I+ ++ AIT Q + + E GDS LK+
Sbjct: 909 LEATLVATRLCETIL----RDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 964
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S QLF + N HEG LS ++ I+ N+ L + + L FI + F P+ W P
Sbjct: 965 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1019
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
KI +T +++ S K +ADVVEALIGA GG + R +V
Sbjct: 1020 ---------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEV 1070
Query: 1131 DFVNV-----PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
+ N+ P + + +N HL + + Y+F + SLLVE+LTH S +
Sbjct: 1071 NLENIDRTTAPMPKDGVTN--HTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQS 1128
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH--- 1242
YQRLEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1129 YQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTN 1188
Query: 1243 ---------ILHASHE----------------------LYKRINITVDSFEKLSLGSTFG 1271
L+ S E L + ++ L ++
Sbjct: 1189 VQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYP 1248
Query: 1272 WESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
W+S++ K DIIES+ GAIF+DS N
Sbjct: 1249 WKSLSQLNADKFFSDIIESILGAIFIDSHGN 1279
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 1061 KMWIIPG-DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
K W++ G D++ EL D++ R + R+ + +K A+ +
Sbjct: 830 KRWVVSGQDDTPIVELECDAVPKRRNLL--HRQTLAAKQPDSETPAI--------SSKIR 879
Query: 1120 LIFLDRIGI-KVDFVNVPYQRQFQVHAERL----VNVRHLESLL-NYSFRDPSLLVEALT 1173
LI + I K+ + + R V +RL V R E++L + F ++ A+T
Sbjct: 880 LILAENCTIDKLPYAETIFGRFISVILDRLEATLVATRLCETILRDLEFSSIRHIITAIT 939
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
S + YQR EF GD+VL + ++ L+ ++P GYL++ R V N A +
Sbjct: 940 APS---AQSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARA 996
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAI 1293
++ GL I++ K + EK+SL + T K L D++E+L GA
Sbjct: 997 ALDAGLDAFIMNKMFTPRKWSAPLIS--EKISLTP----KQRTMSTKVLADVVEALIGAS 1050
Query: 1294 FVDSG 1298
++D G
Sbjct: 1051 YIDGG 1055
>gi|326475978|gb|EGD99987.1| hypothetical protein TESG_07315 [Trichophyton tonsurans CBS 112818]
Length = 1435
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 180/666 (27%), Positives = 292/666 (43%), Gaps = 64/666 (9%)
Query: 13 EVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV 72
E + DTL +R YQ+E L+ ++KQN IV ++TGSGKT IAI+ +R L R + +
Sbjct: 49 EDAPDTLR-SRGYQIEMLDASIKQNIIVAMDTGSGKTQIAILRIRHE--LERCSNDKLVW 105
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYW-GDMGVDFWDGAT-WKEEMSKHEVLVMTPQIL 130
FL PKV L QQ AI K G ++ W W + ++V TPQIL
Sbjct: 106 FLAPKVPLAEQQYRAISQQLPAYQTKILTGADNLERWSTQKIWDAFLLNTRIVVSTPQIL 165
Query: 131 LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH----RLLETGDSNLPRIFGM 186
LD L + L I +L+ DE HH IM FYH +L ET D LP I G+
Sbjct: 166 LDVLSNGFITLRRIALLVFDEAHHCVKASPENKIMKNFYHARIDQLSETND--LPSILGL 223
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TASP S + Q +H K + E ++ K + K IP
Sbjct: 224 TASPTSKLTEDSLRQLEQNLHAC-----CKTPSFHHEEMMQYVHIPELLKISYQKDSTIP 278
Query: 247 HALYTHLADELAMIELKHT------------RSLENLDLNEAQAELIRKKVSKINSTLLY 294
H + L I+++ +S+E + ++ + + + +
Sbjct: 279 HNMEMKFLSMLNDIDIESDPFFQRYKGKTDRKSIERFMRARDRKTPCLDQLKRCFTRVSH 338
Query: 295 CLSELGVWLALKAAETISCYESDFF--AWEQLDGFGETIIKKFGSDASQALVTYVPSGAE 352
ELG W + S + S+ + E+ + ++ D S L +
Sbjct: 339 IYGELGHWAS-------STFISEIYRRTREKRAKLIDQSWSEWDRDDSSFLCNALKPVV- 390
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+I + +N +++K+ L++ LL R IIFVE+ TA++L L+S P
Sbjct: 391 -AIIGERCWNSTPDAVSQKVEHLVD-LLASELTGTSRGIIFVEQRATAVMLSHLISHY-P 447
Query: 413 RHCTWKTKYIAGNNSG-------IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
Y GN++ + +++ + G N++VATS+LEEG+DV
Sbjct: 448 ELAHIMPDYFLGNSAFSDRKADITELSKPGDMKNSIDDLKSGKKNLLVATSVLEEGIDVS 507
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ---SRLENYLASGNKMR 522
+C+LV+ FDP + + SF+Q RGRAR Q+S +++ D+ T +E+ +
Sbjct: 508 ACDLVVCFDPPKQLRSFVQRRGRARKQSSKFVIFYAEDDTATHKDWEAMEDIMKERYFNN 567
Query: 523 KEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
KE + + +ESTG + TL ++ S + +CS LP + + P
Sbjct: 568 KEFIDRLREEDDEEDVEYES---LRIESTGALLTLENARSHLSHFCSTLPCE-FTDTQPD 623
Query: 583 FHIN----KEMGICTLYLPNNCPIQ-----TVIAQGNIKTLKQAACLEACKKLHQIGALT 633
F I+ K+M + LP +Q + A K K+ A +A +L++ G +
Sbjct: 624 FIISNSGIKDMLTAKVLLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYKAGLVN 683
Query: 634 DNLLPD 639
D+L+P+
Sbjct: 684 DHLMPE 689
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 221/466 (47%), Gaps = 74/466 (15%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKV 981
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 931 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSQTILSPVGFQNIQL----V 984
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT +ED + + LE LGDS LK AS QL + HEG+LS KK+ I+SN+ L
Sbjct: 985 LTAITATSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1044
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
K + L FI T F W P NS + N KI +++ +KT+AD
Sbjct: 1045 KAAVDTGLDQFILTTCFTGAKW-RPLYNSTYAD-------NAGKIGEKSTRELSTKTLAD 1096
Query: 1102 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYQRQFQVHAERLVN 1150
VVE+LIGA + GGEN L +FL I I++ F + P F R +
Sbjct: 1097 VVESLIGAAIIDGGENKVLRCLELFLPEINWQPSGERIEILFDSAP---DFNDDCPRDI- 1152
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L++YSF +LL +L+H S ++ + YQRLEFLGD++LD ++T L+
Sbjct: 1153 MSKIEPLIDYSFTKKALLATSLSHPSNLISRM--TYQRLEFLGDSILDNIVTRALFRCKK 1210
Query: 1211 GLSPGYLTDMRSASVNNDCYA------------------------LSSVKH--GLHKHIL 1244
+ + +R+A VN D A ++S H L +++
Sbjct: 1211 EIPHQDMHLIRTALVNADFLAFLCMNTSTDVTREDVCVSPTGEVEVTSSTHQVSLWQYMS 1270
Query: 1245 HASHELYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALGDIIESLAGAIF 1294
H+S ++ + +FE+ L G+++ W +++ PK DIIES+ GAIF
Sbjct: 1271 HSSTDIVETQQAIARTFEELRDQIEKALRSGASYPWTLLSTLNAPKFFSDIIESILGAIF 1330
Query: 1295 VDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTEYCQ 1334
+DS C + + + L+ ++ + + F HP + L Q
Sbjct: 1331 IDSRGLILACQKFLARIGLMDYLQRVLEEDGIDFMHPKQRLGVVAQ 1376
>gi|158706449|sp|A2R345.2|DCL21_ASPNC RecName: Full=Dicer-like protein 2-1; Includes: RecName:
Full=Endoribonuclease dcl2-1; Includes: RecName:
Full=ATP-dependent helicase dcl2-1
Length = 1387
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 176/668 (26%), Positives = 304/668 (45%), Gaps = 88/668 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E E +LK+N IV + TGSGKT IA LLR L P + FL P V L
Sbjct: 20 RSYQVEMFEASLKENIIVTMGTGSGKTHIA--LLRIIKELESNPHKLI-WFLTPTVALCL 76
Query: 83 QQAE-------AIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGL 134
QQ + A++ T + K V+ W + W + + +V+V T +L D +
Sbjct: 77 QQFKFLSDNIPAVRARTLTSLDK------VELWTEQPVWDAILKEMQVVVSTHAVLADAM 130
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKS 193
+ K+ + ++I DE HH +H IM +FYH LE G +P+I G+TASP+
Sbjct: 131 SHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTASPV-- 188
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIP-FSTAKFKFYKYDEIPHALYT- 251
V S+ Q+ + +L+ + + T SE + P F D++ T
Sbjct: 189 -VRSNRQELLKIESNLDAVCKTP-RTHRSELMTHTHRPHLQQILFTPVLLDDLQVGSKTL 246
Query: 252 ----------HLADELAMIELKHT----RSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
L D+ + +L+ + R+L+ + E+ ++ + + L+
Sbjct: 247 KALVSAWTSLRLEDDPYIKKLRKSPLDGRALQKV--LESGKTYCNDQLKRFATRSLHIFE 304
Query: 298 ELGVWLALKAAETISCYESDFF---AWEQLDGFGETIIKKFG-SDASQALVTYVPSGAEW 353
ELG W A D+F + EQL G +D +A + + S
Sbjct: 305 ELGEWAA------------DYFIHASIEQLKARAGNSADTMGWTDEEKAYLLDIVSKLPI 352
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLP 412
D + + D ++ K L+E L+ +G + +IF ++ T V++ LLS +
Sbjct: 353 PNIDLTHSDPDRIPISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVT 411
Query: 413 RH---CTWKTKYIAGNNSGI--QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
+H C + G + + + + Q + + EFR G N+I+AT +LEEG+D+ +C
Sbjct: 412 KHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISAC 471
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---------QSRLENYLASG 518
++V+ FD + SF+Q RGRAR + S Y +M + D ++ Q+ +E Y
Sbjct: 472 SVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAYEDDE 531
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
++R+ + +N + + V+STG + T ++V+ + +C+ LP Y
Sbjct: 532 RRLRE------AWALEAINEEVV--ERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYAS 583
Query: 579 PTPKFHINKE-----MGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIG 630
P+F K+ G TL + ++ + Q +T + A A +A K+L++ G
Sbjct: 584 NEPEFSYEKDDADLLRGTVTLPSCVHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFG 643
Query: 631 ALTDNLLP 638
L+D+LLP
Sbjct: 644 LLSDHLLP 651
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 199/451 (44%), Gaps = 71/451 (15%)
Query: 896 RRIFHVQNYLSKCRQQKQKEP---SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
R + H Q +K Q + P SKI L E C I P + + F F V I+ R
Sbjct: 854 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 908
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
L++ L+A L +L +++ +I+ ++ AIT Q + + E GDS LK+
Sbjct: 909 LEATLVATRLCETIL----RDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 964
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S QLF + N HEG LS ++ I+ N+ L + + L FI + F P+ W P
Sbjct: 965 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1019
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
KI +T +++ S K +ADVVEALIGA GG + R +V
Sbjct: 1020 ---------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEV 1070
Query: 1131 DFVNV-----PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
+ N+ P + + +N HL + + Y+F + SLLVE+LTH S +
Sbjct: 1071 NLENIDRTTAPMPKDGVTN--HTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQS 1128
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH--- 1242
YQRLEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1129 YQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTN 1188
Query: 1243 ---------ILHASHE----------------------LYKRINITVDSFEKLSLGSTFG 1271
L+ S E L + ++ L ++
Sbjct: 1189 VQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYP 1248
Query: 1272 WESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
W+S++ K DIIES+ GAIF+DS N
Sbjct: 1249 WKSLSQLNADKFFSDIIESILGAIFIDSHGN 1279
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 1061 KMWIIPG-DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
K W++ G D++ EL D++ R + R+ + +K A+ +
Sbjct: 830 KRWVVSGQDDTPIVELECDAVPKRRNLL--HRQTLAAKQPDSETPAI--------SSKIR 879
Query: 1120 LIFLDRIGI-KVDFVNVPYQRQFQVHAERL----VNVRHLESLL-NYSFRDPSLLVEALT 1173
LI + I K+ + + R V +RL V R E++L + F ++ A+T
Sbjct: 880 LILAENCTIDKLPYAETIFGRFISVILDRLEATLVATRLCETILRDLEFSSIRHIITAIT 939
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
S + YQR EF GD+VL + ++ L+ ++P GYL++ R V N A +
Sbjct: 940 APS---AQSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARA 996
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAI 1293
++ GL I++ K + EK+SL + T K L D++E+L GA
Sbjct: 997 ALDAGLDAFIMNKMFTPRKWSAPLIS--EKISLTP----KQRTMSTKVLADVVEALIGAS 1050
Query: 1294 FVDSG 1298
++D G
Sbjct: 1051 YIDGG 1055
>gi|406034947|emb|CCF23094.1| Dicer 2 [Blattella germanica]
Length = 1649
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 230/490 (46%), Gaps = 86/490 (17%)
Query: 980 KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+V++A+T+ + F+LE LETLGDSFLK AS L+ Y EG L+ K ++I N
Sbjct: 1162 EVVQALTSASSNDIFNLERLETLGDSFLKLMASLYLYMHYLRLDEGKLTQVKGKLIGNRN 1221
Query: 1040 LCKLGCEQKLPGFIRTESFDPKM-WI----------------------------IPGDNS 1070
L G QKL G+++ F P WI +P +
Sbjct: 1222 LYYCGINQKLGGYMKVHDFVPTSDWIAPGICVDREIQQLMRAMNVSPNFLYELVLPPNEQ 1281
Query: 1071 GSYELND-----------DSLFNGRKIYVT-----GRKKVKSKTVADVVEALIGAFLSTG 1114
S L++ D+ + I+ + + V KT+AD VEALIGA+L
Sbjct: 1282 MSGVLSENTKEIIRQKLTDANVDKSGIHSSMENFLAVRAVADKTIADGVEALIGAYLKGS 1341
Query: 1115 GENVGLIFLDRI---------GIKVDFVNVPYQRQFQVHAER-----LVNVRH---LESL 1157
G L L + G +D + + H + L+++ +E++
Sbjct: 1342 GIRGALRLLTWLKILPSEALPGALLDTQPPTADVKMRDHNQPGDIYVLLSIHECMAIENI 1401
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
L Y+F+D S L++ALTH SY + CYQRLEFLGDA+LD+LIT ++Y L+PG L
Sbjct: 1402 LQYTFKDRSYLLQALTHASYTPNRVTECYQRLEFLGDAILDFLITCHIYESCGELTPGEL 1461
Query: 1218 TDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWE-- 1273
TD+RS+ VNN +A +V++G HK + + S R+ VD F K G + E
Sbjct: 1462 TDLRSSLVNNVTFASLTVRYGFHKFMKYTS----TRLMDMVDRFVKFQEDNGHSINEEVL 1517
Query: 1274 -----------SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PET 1320
PK LGD+ ES+AGAI++DSG N + V++ L+ I +
Sbjct: 1518 ILLEETETNIAEAIDVPKVLGDLFESIAGAIYLDSGMNLKEVWRVYYRLMRKEIRTFSKE 1577
Query: 1321 MRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG-RLFEHTFLDADKKTAKK 1379
+ PVR L E +K + S VTV++ +G R + H F + K AK+
Sbjct: 1578 VPKQPVRLLYENAPHRPEFLKSRLIDN-SNVVMVTVKLLVDGKRRYFHGFGNT-KLQAKR 1635
Query: 1380 VACKEVLKSL 1389
A K LKSL
Sbjct: 1636 AAAKCALKSL 1645
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 180/672 (26%), Positives = 307/672 (45%), Gaps = 96/672 (14%)
Query: 364 DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK---TK 420
D + E C +SL R E ++FVER TA V+ +L EL ++
Sbjct: 376 DIAISPEDADCNTDSL--QRKKEKFCTLVFVERRFTAKVVYWILEELCKVDADFQHISPD 433
Query: 421 YIAGNNSGIQCQSRK---KQN---EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
+I G N +R+ ++N + + F+ G N++VA+++LEEG+D+Q CNLV+ FD
Sbjct: 434 FIVGFNYNPFNDTREGALQRNWCYDCLNRFQTGEKNLLVASNVLEEGMDIQKCNLVVKFD 493
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
S++QS+GRAR + S Y+LMV S D+T S+ E Y A+ + + ++
Sbjct: 494 LPLNYRSYVQSKGRARHRTSHYILMVPSSDNTFMSKYEEYKATEKAIERLLVGRTEEREG 553
Query: 535 P----LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--E 588
P + +Y + ++ + L S++ L++ YC+ LP D + P +++ + +
Sbjct: 554 PSEELIAKTLYDQLVPPYRTSKSSVNLVSAIPLLHRYCNMLPQDKFTVLAPIWYMAETTK 613
Query: 589 MGICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLP------- 638
IC L LP N P+ +I N K K++A LEACK+LHQ+G LTD+LLP
Sbjct: 614 PKIC-LQLPMNSPLTELIEGQEMDNRKLSKRSAALEACKRLHQMGELTDSLLPTGRESAV 672
Query: 639 ------------DIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITY-HCYLIE 685
D E+ D RG++ +PI FP L N P+ ++ H ++E
Sbjct: 673 LDSSDLFPLYVEDDETEELDTAPRGSKNRKQYYPIQFPDFLSNCRPKPNVDSFLHVIVME 732
Query: 686 LKQHFNYDISARNIVLAMRTELES----------EIKKVNFDLEVERGRLTVNLKHLGRI 735
D + + + + +ES EI +F + + G L V+++ +
Sbjct: 733 PVYSKPTDNNRKLVFYNLLDSVESFAILSSKPMPEI--CDFPIYMNVGELIVHVQQNDKF 790
Query: 736 -QLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLP----STG-Q 789
+L +V F I +FR I+ L K I+D ++NLE Y ++P S G
Sbjct: 791 YRLTEEEVASLEVFNIMIFRQIL--KLMKPFMIID----KENLENSYFMVPTRIDSNGVH 844
Query: 790 LIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP-----HN 844
IDW V R +G+ ++ + + ++ V P
Sbjct: 845 EIDWDVV------RSHGT------LPEVVEPTEEERNNLVISEELFGKTVVVPWYRSTQP 892
Query: 845 GQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY 904
Q Y +T + L +S F N+ T+Y +Y+++Y +++ +PLL + I + N
Sbjct: 893 DQNYIVTQITS-LTPSSPFPSND--YTSYADYYDKKYKLEIVKVDQPLLEVKAISNKINC 949
Query: 905 L-------SKCRQQKQKEPSKISFE--LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
L S ++++ + FE L ELC P L + T +P+I+HR+
Sbjct: 950 LRPRGNKVSHSTSKRKRHELQEDFEENLIGELCMRFQFPSVL--WLKATCLPTILHRINH 1007
Query: 956 LLLAVNLKNMLL 967
+LLA L+ ++
Sbjct: 1008 ILLAEELRQKIV 1019
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 114/201 (56%), Gaps = 12/201 (5%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR--SYAYLLRKPSPFVAVFLVPKVV 79
AR YQ + A K+N+I++L TGSGKT IA+ML++ S A L K + F+V V
Sbjct: 12 ARPYQEVLMNQAKKRNSIIYLPTGSGKTYIAVMLIKELSGALELGKHT----FFMVNTVA 67
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQAE IK HT VG+Y GDM VDFW W++E++KH+++VMT QI +D L
Sbjct: 68 LVNQQAEYIKRHTHYSVGEYSGDMNVDFWTRDKWEQELNKHQIMVMTCQIFVDILSFGVV 127
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
KL + +LI DECHHA +M F ++ PR+ G+TA+ + S+ +
Sbjct: 128 KLQNVNLLIFDECHHAVNDQPMRQVMQHFERCPIQQQ----PRVLGLTATLLNKNCSAVK 183
Query: 200 QDYWQKIHDLETLMNSKVYTC 220
++ LET S V TC
Sbjct: 184 --VANEVKKLETTFQSTVATC 202
>gi|167046022|gb|ABZ10542.1| dicer-like protein B [Placozoa sp. DMJ-2008]
Length = 357
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 195/359 (54%), Gaps = 43/359 (11%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L+A+T + +DF+LE+LE LG S+LKYA S F +Y HEG LS K +I+SN L
Sbjct: 1 LKALTLARANDDFNLETLEFLGGSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60
Query: 1042 KLGCEQKLPGFIRTESFDPK-MWIIPG-------DNSGSYE-LNDDSLFNGRKIYVTGRK 1092
++G + LPG+I + D +W+ PG D+ G E L+ +L +++ T +
Sbjct: 61 QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPT--Q 118
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFL-DRIGIKV-----------DFVNVPYQRQ 1140
K+K+K +ADV+EAL+G L GEN F+ + +GIKV D +
Sbjct: 119 KLKNKCIADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDDDARKEISKI 178
Query: 1141 FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY---MLPEIPRCYQRLEFLGDAVL 1197
+ H N++ LE++L YSF+D LL+ ALTH +Y + E CYQRLEFLGDA+L
Sbjct: 179 YNAH-----NLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAIL 233
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN-- 1255
Y++ + Y+ P L D AS+ N+ A ++ +G+HK+ + S L+ +IN
Sbjct: 234 QYIVVRHCYHANNNYKPADLHDFVEASLQNESLAAMTMVYGIHKYFFYNSPSLFSQINQL 293
Query: 1256 -ITVD---------SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
VD S E+ +L + + PK LGD+ ESL GAIF+D G + EVV
Sbjct: 294 LQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVV 352
>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666
SS1]
Length = 1500
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 173/677 (25%), Positives = 298/677 (44%), Gaps = 75/677 (11%)
Query: 15 SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFL 74
S D P R YQ E A N I L TGSGKT I+I+L++S + + VFL
Sbjct: 9 SGDITP--RQYQEEIFIRARHSNVIAVLGTGSGKTYISILLIKSITSQSHLSAGKIVVFL 66
Query: 75 VPKVVLVPQQAEAI-KMHTDLKVGKYWGD--MGVDFWDGATWKEEMSKHEVLVMTPQILL 131
VPKV LV QQ+ I K L+V K G + D + A WK+ +++VMT Q+ +
Sbjct: 67 VPKVPLVEQQSVFIEKQLPSLRVRKVHGGDALAGDMLNRAEWKKFFDSADIVVMTAQVFV 126
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ L S++ ++ + +LI DECHH R H Y IM + Y S P+IFGMTAS +
Sbjct: 127 NALTHSHWSIDKVSLLIFDECHHTRLNHPYNVIMRDSYK---HCSPSQRPKIFGMTAS-V 182
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTC------------ASESVLSNFIPFSTAKFKF 239
+ S +++D + +LE + +K T + V + K
Sbjct: 183 VWRPSRAQED----LQELEANLVAKAITVQMHHEELGHHSPKPKEVCAPIYDRLEIDIKA 238
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
+P A A A+++ ++T +L NL A+ L + ++
Sbjct: 239 AGSYALPVAPLDDPAIPWAIVDARYTTALRNLGPYAAETFLYKDLSDRLRQ--------- 289
Query: 300 GVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT------YVPSGAEW 353
++ A+ +S S A E +++ L+T +P
Sbjct: 290 --FIQPSQADEMSRLRSQLQAMHTESSTPEQLLRDPEMRQIYDLITEYSPLFEMPGPVHG 347
Query: 354 SIGDDSKFNLDSGLL------TEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
S S+ G + + K+ L+E +L + + I+FVE+ A L LL
Sbjct: 348 SSIPSSENQFPPGWVFDLSWCSPKVHVLVE-VLRNQFTPASQGIVFVEQRHVASGLARLL 406
Query: 408 SELLPRHCTWKTKYIAGNNSGI-QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
S++ + G+ S + +QN ++E FR+ +N+++AT + EEGLD +
Sbjct: 407 SKVDELKGVVRCAEFVGHASDTGEGMKAGEQNRVLESFRKRSINLLIATQVAEEGLDFPA 466
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLA-SGNKMRKEV 525
C++V+ FD + + F+QSRGRAR ++S +++MV+ GD T R + +
Sbjct: 467 CDVVVRFDSIQHLVGFVQSRGRARHKDSTFVIMVEQGDETAIERYKRFAEIDSLSSVSSA 526
Query: 526 LSHASLPCSPLNNHMYGED--------------FYHVESTGTIATLSSSVSLIYFYCSRL 571
+ + P + + G D + V T + + ++++ L+ C+ +
Sbjct: 527 SAASETPTNLTSMRGMGSDEDDEPNEVDLAQRERFVVSDTKAVLSYNNAIDLLSRLCALI 586
Query: 572 PSDGY---FKPTPKFHINKE-MGICTLYLPNNCPIQ------TVIAQGNIKTLKQAACLE 621
P+D + +KPT +I + +C+L LP+ P+ T + + + K+A
Sbjct: 587 PTDNFTRTYKPTYITNIAQTGYYVCSLTLPSALPLPHGHLKYTGPGKCSKREAKRAVAFL 646
Query: 622 ACKKLHQIGALTDNLLP 638
A K L+ + + LLP
Sbjct: 647 AVKALYGLNVFDEYLLP 663
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 210/440 (47%), Gaps = 46/440 (10%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRL------QSLLLAVNLKNMLLDHCMQNVTI 976
P CR IS S + +F +P ++HR+ QS LA+ L + D ++ TI
Sbjct: 928 FPLSSCR--WTAISTSLYRTFGLLPRLLHRINDVFRAQSAQLALGLPPINTDLLIEAYTI 985
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P + ++ + ETLGDS LK S +F Y HEG LSV ++ IS
Sbjct: 986 PAART-----------GWNNQRFETLGDSVLKLCTSVHVFNKYPWRHEGQLSVLRQVAIS 1034
Query: 1037 NAALCKLGCEQKLPGFIRTESF-DPKMWII-----PGDNSGSYELNDDSLFNGRKIYVTG 1090
N L + L F+ TES + W P + + + D
Sbjct: 1035 NMTLLRKAKAVSLESFLNTESTSNETTWRYCLPSGPAPHHPCHPVKDTDRVPLPPPSSRP 1094
Query: 1091 ----RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF----Q 1142
++ +++ D +EA +GA +TGG + L +G+ ++P+ +F +
Sbjct: 1095 RRLVHRRFPRRSLQDCMEATLGAAYATGGIPMALQAGTALGLNFGG-SIPWLTRFGKQCE 1153
Query: 1143 VHAER---LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
AER L NV L+ L Y+FR+P LLVEA+TH S+ + YQRLEFLGDAV+D
Sbjct: 1154 SSAERPGVLFNV--LQERLGYTFRNPELLVEAMTHPSFATGG--QSYQRLEFLGDAVIDL 1209
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITV 1258
+ YLYNK+P + G L+ R+ +V+ + +VKH GLHK +L L + +
Sbjct: 1210 TVMSYLYNKFPSATSGKLSTARARAVSAPVLSSIAVKHLGLHKLMLVNETNLSIAMGKYL 1269
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN---REVVFQSIRPLLEPM 1315
+ E+ S PKA+ D++ESL GA+FVDSG N + V + + + +
Sbjct: 1270 PTLEETSYEDMVLNAWAHDPPKAISDVLESLLGAVFVDSGWNWDLAQAVTEGVMNDVLEL 1329
Query: 1316 ITPETMRFHPVRELTEYCQK 1335
++P+T + PV EL + K
Sbjct: 1330 LSPDTPK-DPVSELMVWTAK 1348
>gi|330944921|ref|XP_003306459.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
gi|311316023|gb|EFQ85435.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
Length = 1448
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 196/723 (27%), Positives = 328/723 (45%), Gaps = 86/723 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR--KPSPFVAVFLVPKVVL 80
R YQ E +E +++ N IV ++TGSGKT IAI R+ + KP+ + FL P V L
Sbjct: 63 RAYQAEMVEESMRANIIVVMDTGSGKTQIAIERTRAELETCQPDKPTRKIVWFLAPTVSL 122
Query: 81 VPQQAEAIKMHTDLKVGK--YWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLS 137
QQ E M G G ++FW W ++ ++V T Q+L + L
Sbjct: 123 CEQQHEVF-MSNLPGFGHQILCGRDDIEFWTTQRQWDSILTNVRIVVSTHQVLFEALTHG 181
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ L + +LI DE HH H +MT+FY L ++LP++ G+TASP+ V++
Sbjct: 182 FVTLTKLALLIFDEAHHCTLNHPANQLMTKFYMPQLHCNSTSLPKVLGLTASPVMKAVAT 241
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVL--SNFIPF-STAKFKFYKYDEIPHALYTHLA 254
+ LE L+ +Y A L S + + + Y P + H
Sbjct: 242 RQ--------GLE-LIEQNLYATAKTPKLHRSELMRYVHQPELVQIAYPSAPPGTH-HSQ 291
Query: 255 DELAMIELKHTRSLEN-------LDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
LA+ + T L+ LD + ++ R+ +S YC +L L KA
Sbjct: 292 LLLALQDAYQTYDLQKDPYLIALLDQHSKGYDVSRQLDRLWSSRKTYCYDQLK-QLKNKA 350
Query: 308 ---AETISCYESDFF------AWEQLDGFGETIIKKFGSDASQALVTY---VPSGAEWSI 355
A+ + +F+ +E + G + + ++ Q L+ +P S+
Sbjct: 351 EAMADELGTSVMEFYLRQCIATFENMTGIFDQQLLDLSTNERQHLLNVFKSLPLNNPTSV 410
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
D NL ++K+ L+++L+ E G D ++FVE+ + L +L+
Sbjct: 411 PDGILDNL-----SQKVNILVDTLVAEVEGNPDFTGLVFVEQRVWVASLAEILT------ 459
Query: 415 CTWKTKYI--AGNNSGIQCQSRKKQN-----------EIVEEFRRGLVNVIVATSILEEG 461
C +TK++ G G S++K N +++FR G++N+++ATS+LEEG
Sbjct: 460 CHPRTKHLLRVGTFVGTSKSSKRKSNISVFAEPKNQQTTLDDFRAGIINLVLATSVLEEG 519
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+DV SC+LVI F+ + + SF+Q RGRAR Q S YL+ V D+ ++++ + +M
Sbjct: 520 IDVSSCHLVICFEQPKNLKSFVQRRGRARRQRSRYLVFVP--DTRNVQSVKSWQSLEAEM 577
Query: 522 RKEVLS---HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
RK L YGE + +ESTG + TL ++ ++ +C+RL S Y
Sbjct: 578 RKAYEDDNRKVRLAQEKEQVDEYGERYLRIESTGALLTLDNASQHLHHFCARLASGTYAN 637
Query: 579 PTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLK---------QAACLEACKKLHQI 629
TP+F + G T + PI K+LK + A EA K L+
Sbjct: 638 MTPEFDFTHDHGQITAKV--TLPISVDPKVRTAKSLKTWVTERMAQKDAAFEAYKALYHA 695
Query: 630 GALTDNLLPDIVVEKHD--AQKRGNEPYNAEHPIYF---PPELVNQSPQDTKITYHCYLI 684
+ DNLLP + E+ D AQ + E ++ P+ P ++ +S + T++ L+
Sbjct: 696 KLVNDNLLP-VRDEEEDQAAQYQVREDRSSMVPVSLTMDPCWMMAKSHELKPYTWYRTLL 754
Query: 685 ELK 687
E++
Sbjct: 755 EVR 757
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 194/406 (47%), Gaps = 53/406 (13%)
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAIT 986
C + PI + F PSI+H+L+ ++A L+ LL + N+ +P + + A+T
Sbjct: 948 CIVENLPIPYAIF--GLLFPSIVHKLEVNIVAETLRTTLLKPVEVDNLHLPVL--VTALT 1003
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
+ E + LE LGD LK+ AS L EG+L+ KK +++SN L +
Sbjct: 1004 SSATNEGNDYQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLA 1063
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEAL 1106
L +I + F W S L + +L +++ SK +ADV+E+L
Sbjct: 1064 AGLDQYIFYKRFTGAKW---KPRYISLVLAESTL--------PEKQEKSSKLIADVIESL 1112
Query: 1107 IGAFLSTGGENVG------LIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNY 1160
IGA GG + L+ L++ + + Y H + ++++ +E LL Y
Sbjct: 1113 IGASYIIGGFSKAFACVQTLLPLEKWTPLAEAKEILYNAA--PHQDTVMSLGLIEKLLGY 1170
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F + +LL+EALTH ++ Y+R EFLGDAVLDY+++ LY P LS + +
Sbjct: 1171 KFNNKALLLEALTHVTFRGLNTNCSYERHEFLGDAVLDYIVSRKLYAHKPELSHRKMHGI 1230
Query: 1221 RSASVNNDCYALS--------------SVKHGLHKHILH-----ASHELY-KRINIT--- 1257
R+A VN A S +++ +H+ L S+EL RI T
Sbjct: 1231 RTAMVNASFLAYSMFETTVTEELTNKNTLEPEVHQRALWQFLRCTSNELVASRIIATQQH 1290
Query: 1258 VDSFEKLSLG----STFGWE--SVTSFPKALGDIIESLAGAIFVDS 1297
++ +++ G S F W+ S+T PK L DI+ES+ GA+++DS
Sbjct: 1291 AEARNRIATGLKHDSRFPWQALSLTDPPKYLSDIVESVIGALYIDS 1336
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD +L ++ +++L + G LT + V+N A +++ GL ++I
Sbjct: 1013 YQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYI-- 1070
Query: 1246 ASHELYKRINIT--VDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
YKR + L L + E K + D+IESL GA ++ G ++
Sbjct: 1071 ----FYKRFTGAKWKPRYISLVLAESTLPEKQEKSSKLIADVIESLIGASYIIGGFSKAF 1126
Query: 1304 V-FQSIRPL 1311
Q++ PL
Sbjct: 1127 ACVQTLLPL 1135
>gi|413918888|gb|AFW58820.1| hypothetical protein ZEAMMB73_649074, partial [Zea mays]
Length = 237
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 136/211 (64%), Gaps = 10/211 (4%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQL+ + A+ +N IV+L TG GKT IA++L+ +L+RKPS V VFL P
Sbjct: 20 DPRTIARKYQLDLCKRAVDENIIVYLGTGCGKTHIAVLLMYELGHLIRKPSREVCVFLAP 79
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+ LV QQA I T+ KV +Y+G G D W++EM ++EVLVMTPQILL LR
Sbjct: 80 TIPLVRQQAMVIADSTNFKVQRYYGS-GKHSRDHQAWEKEMGEYEVLVMTPQILLHNLRH 138
Query: 137 SYFKLNMIKVLILDECHHARG--KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ ++++I +LI DECHHA+ +H YA IM EFY+ D + PR+FGMTASPI K
Sbjct: 139 CFIRMDLIALLIFDECHHAQAQKRHPYAQIMKEFYN----NADKH-PRVFGMTASPIIGK 193
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESV 225
S++ Y + I+ LE L+N+KV C+ ++V
Sbjct: 194 GGSNKLTYTKCINSLEELLNAKV--CSVDNV 222
>gi|46117132|ref|XP_384584.1| hypothetical protein FG04408.1 [Gibberella zeae PH-1]
Length = 1451
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 290/661 (43%), Gaps = 75/661 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E LE ++K+N IV ++TGSGKT +A+M ++ + L +P ++ + K V +
Sbjct: 79 RGYQREMLEQSIKRNVIVAMDTGSGKTQVAVMRIQ---HELDTCAPDKIIWFLGKTVSLC 135
Query: 83 QQAEAI--KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
+Q ++ + + + G + +D W W ++ ++V T IL D L ++ K
Sbjct: 136 EQQYSVVQRQMPSVSMKLLTGQLNIDAWSEDVWPRILNGTRIIVSTFDILRDALDHAFVK 195
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+NM+ +++ DE H+ +M FYH G +P I G+TASPI+SK E
Sbjct: 196 MNMLSLIVFDEVHNCVKNSSGRKVMVNFYHEHKNAG-MPVPAILGLTASPIQSKSIHDE- 253
Query: 201 DYWQKIHDLETLMNSKVYT-CASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADEL 257
I +LE M++ T + L + Y +E P L L E
Sbjct: 254 -----ILELEVTMDAVCITPTINRKELLQHVNKPNLSRVLYDVEEHPTRTPLMQTLQSEY 308
Query: 258 AMIELKHTRSL---------------ENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+ +++ S+ E L + +K++ + + L ELG W
Sbjct: 309 SAMDITQDPSIIKAKQLIAKGEKTGPEILSMLMKHRTFSQKQLKSLWNKSKDILDELGPW 368
Query: 303 LALK-AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
A K +E +S + +++D F S TY+ +
Sbjct: 369 AADKYISELVSLF------LKRIDS-----PMTFNESWSNEDRTYLAGHLRQIAASPHQP 417
Query: 362 NL-DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
L D L +K LI+ LL ED+ IIFV A VL +LL E H + +
Sbjct: 418 KLPDRHNLADKTNKLIQELLA--ADEDVVGIIFVRSRAAANVLCALLRE----HPEIRQR 471
Query: 421 YIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
Y G+ G +KQN + + +F+ G +N++V+TS+LEEG+DV CNLV
Sbjct: 472 YRVGSVVGSAATKIRKQNIYEYLPGATADTLRDFKTGAINLLVSTSVLEEGIDVAVCNLV 531
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVK-SGDSTTQSRLENYLASGNKMRKEVLSHA 529
I FD + T+ S IQ RGRAR Q S +++ + S D+ LE + S + + L
Sbjct: 532 ICFDETTTLKSHIQRRGRARKQKSKMIVLARSSSDAREWDSLERDMKSRYEQERGELDAL 591
Query: 530 SLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK-E 588
+ + Y V+++G L +S + +C+++ Y P P + +K E
Sbjct: 592 EIEARTEATSSFS---YTVKNSGARLDLENSRQHLEHFCNKVFQRDYVDPRPVYIFHKTE 648
Query: 589 MG------ICTLYLPNNCPIQTVIAQG-----NIKTLKQAACLEACKKLHQIGALTDNLL 637
+G T+ LP+ P QG + K + A A LHQ G ++D+LL
Sbjct: 649 LGSAPPTFSATVTLPSGLPKHLRRCQGGGGWRSEKNAMKEAAFRAFVMLHQEGLVSDHLL 708
Query: 638 P 638
P
Sbjct: 709 P 709
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 237/510 (46%), Gaps = 80/510 (15%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLG 1003
+PSI+H L+ L+A L + LL V I ++ V+EAI+++ E E +E LG
Sbjct: 955 LIPSIIHELEVQLIANELSSTLL----APVGITDLQLVIEAISSRSAAEPVDYERIEFLG 1010
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DS LKY Q + + EGLL+ K+R++SN L ++ E L FI +++F W
Sbjct: 1011 DSVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKW 1070
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--- 1120
L D + + + R V KT+ADVVEAL+GA GG + L
Sbjct: 1071 ---------RPLYRDEFLDKKPVDGVSRF-VGPKTLADVVEALVGASYQDGGISKALECI 1120
Query: 1121 -IFLDRIGIKVDFVNVPYQRQFQVHAE-----RLVNVRHLESLLNYSFRDPSLLVEALTH 1174
+FL G K ++ + R A + LE L+ Y+F+ SLL+EA+TH
Sbjct: 1121 KVFL---GTKCNWHDDKVARDILFRAAISDVPLPPTMEPLEELIGYTFQKKSLLIEAMTH 1177
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
GSY R Y++LEFLGDAVLDY++ ++ P + G L +++A N D A ++
Sbjct: 1178 GSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMANADFLAFTN 1237
Query: 1235 VKHGLH----------------------KHILHASHELYKRINITVDSFEKL-------- 1264
++HGL K + H+S E+ + +N T FE L
Sbjct: 1238 MQHGLRRPEVEINENGEPVPTEVSLPIWKFMRHSSPEMGRIMNETQARFESLQEEINEAR 1297
Query: 1265 SLGSTFGWESVTSF-PKAL-GDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITP 1318
+ G + W + PK DI E+ GAI+VDSG C + + P L+ +++
Sbjct: 1298 TNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSGDIEVCTAFLHKFGVLPYLDRILSD 1357
Query: 1319 ETMRFHPVRELTEYC--QK---NHFSMKKP---------VASRISGKAAVTV-EVQANGR 1363
HP EL + QK ++ ++ P V R+ G + + + +A +
Sbjct: 1358 NIHVQHPKEELAKLAIDQKMTYDYTAVDGPIKEYLCTAKVGDRVVGVVSGALNKAEAMTK 1417
Query: 1364 LFEH--TFLDADKKTAKKVACKEVLKSLRA 1391
E FL+ ++K A+K A E+ + L A
Sbjct: 1418 AAEEGVNFLNGEQKRAEKAAQDEMARFLVA 1447
>gi|443922458|gb|ELU41905.1| dicer-like protein 1 [Rhizoctonia solani AG-1 IA]
Length = 1426
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 243/1061 (22%), Positives = 437/1061 (41%), Gaps = 162/1061 (15%)
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG-RARMQNSDYLL 498
I+E+F+ GL+N ++ T + +D C+ VI +F+ RG R Q + +L
Sbjct: 366 IIEDFKNGLINTLICTESILSSIDGDVCSHVI----CGASLTFLAERGNREHYQVARDIL 421
Query: 499 MVKSGDSTTQSRLENYLASGNKMRKEVLSHA------SLPCSPLNNHMYGEDFYHVESTG 552
+ D++ + + N G + L++ S+ P + G
Sbjct: 422 KM---DNSIYNWVLNMNVDGAPSPPKPLANCRRFNQYSIIIGPSRESSRESPYIQDPIIG 478
Query: 553 TIATLSSSVSLIY-FYCSRLPSDGYFKPTPKFHIN---------KEMGICTLYLPNNC-- 600
+ + S + Y F +R D P F K+ CT+ N+C
Sbjct: 479 SRIYIQESEEVFYRFLANRAEEDAALIPVKVFSYERVSVENTDLKDHWCCTIRT-NSCDP 537
Query: 601 PIQTVIAQGNIKTL-KQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEH 659
P++ K L + +AC AC L +G L + P + H + +P
Sbjct: 538 PLEIHGEPSLCKALARSSACFRACFTLFNLGLLPSSFFPSRPL--HTWKHGILQPPKNRV 595
Query: 660 PI--YFPPELV----NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKK 713
I Y+PP L N ++ YLI+ + +++L +R L +IK+
Sbjct: 596 AIDTYYPPVLPLFWHNCLLAAPSKLFYPYLIQFSMGSQTGLYP-SMILLIRIPL-GDIKE 653
Query: 714 VNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL 773
F + + L V+L + LI QV L R+ + L+R++ + D +
Sbjct: 654 --FSVFPNQTELKVSLSQCAPLSLITEQVELAFRYTLNLWRILGNKQYDSPSG------- 704
Query: 774 RDNLEIDYLLLPST-GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTC 832
E+ Y +LP G + +A S +N F R + +
Sbjct: 705 ----ELAYFVLPVKFGPNFEPTRIARTTSIEPCISWQEVNDLVSFRVRPLKCNNVDEMWL 760
Query: 833 KIHNSLVCTPHN--GQIYCITGVLGHLNANSLFTRNNGS------VTTYKKHYEERYGIQ 884
+ N ++ N + + + LN SL ++ + Y+ H E GIQ
Sbjct: 761 DLMNGVIQDRSNEFTRRFENAKLRKDLNPLSLIMQDKPGEPQISLLDYYRTHRHEFEGIQ 820
Query: 885 LCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPS--KISFELPPELCRIIMAPISLSTFYS 942
++PL+ + + N L+ +EP+ K + L PE+C + + I TF +
Sbjct: 821 NL--QQPLIEATLLPGLANQLNP------QEPTVQKTTNYLVPEICYV--SSIPAPTFRT 870
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETL 1002
+ +PS++ ++++L+A + +Q+ V A+ ++ F E LE L
Sbjct: 871 ASLLPSVIWHIENVLIAKEVNLTFFQGQIQDEL-----VAHALCSRMAHRTFSYERLEFL 925
Query: 1003 G------------------DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
G D+F+KYAAS L+ G+L K++++++N +L
Sbjct: 926 GRHHIVPHMFDSMRLIYAGDTFIKYAASAYLYGVEPTAPSGVLHSKRQKMVNNRSLWLGA 985
Query: 1045 CEQKLPGFIRTESFDPKMWIIP-----------GDNSGSYELNDDSLFNGRKIYVTGR-- 1091
LP I+++ F PK W+IP G+N G F G+ + R
Sbjct: 986 QALGLPPCIQSDVFRPKQWVIPNVLISKKSPIHGENPG---------FTGQAQLLNSRQY 1036
Query: 1092 -KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNV----PYQRQFQ 1142
+++ KT+ADVVEA+IGA L +GGE + +G D+++V P +
Sbjct: 1037 SRQIPPKTIADVVEAMIGAALLSGGEELAFSVAKTLGFDTLKTCDWLDVISYAPNKSMTM 1096
Query: 1143 VHAE-RLVNVRHLESLLNYSFRDPSLLVEALT------------------HGSYMLPEIP 1183
++ + + L ++ S +P LL++A+ H S +
Sbjct: 1097 KESDHKGETLDGLIKIIGVSLDNPELLLQAMVRIFLSIIKLEVQLRTVQQHAS--MARSS 1154
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
Y+RLEFLGDAVLD L+ ++ SP +T ++S+ V+N A+ ++ GLH+++
Sbjct: 1155 ESYERLEFLGDAVLDMLVVQSFFSDEEEWSPHSMTLIKSSMVSNRALAIICIESGLHQYL 1214
Query: 1244 LHASHELYKRINITVDSFEKL-SLGSTFG-----WESVTSFPKALGDIIESLAGAIFVDS 1297
+H + L + I +D +K + T W + + PKALGD++ESL GAI++ S
Sbjct: 1215 MHDINSLAQSIVTFIDEVQKCKQIARTDAQRLKYWSKLVA-PKALGDVVESLLGAIYISS 1273
Query: 1298 GCN----REVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK---NHFSMKKPVASRISG 1350
G + + V + ++P + I + M HP+ L + + F + K +G
Sbjct: 1274 GFSITRVKTVYDRVLKPFYDRYIDKKAMLTHPMSRLMKRLESIGCRSFGVAKAETQLPNG 1333
Query: 1351 KAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
EV+ +G++ + ++ A K A + L L A
Sbjct: 1334 GTGFKCEVKIHGQIIAQAASEKAQQ-AIKDATERALNLLDA 1373
>gi|406863987|gb|EKD17033.1| RNase3 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1477
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 184/672 (27%), Positives = 304/672 (45%), Gaps = 63/672 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV-FLVPKVVLV 81
R YQ E L+ +LK+N IV ++TGSGKT IA+M ++ + + + SP + FL P V L
Sbjct: 70 RPYQQEMLQESLKRNIIVAMDTGSGKTHIAVMRMQ---HEIERSSPNQIIWFLAPTVDLC 126
Query: 82 PQQAEAIKMHTDLKVGKYW-GDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ I+ K+ GD GVD W T W + +++V T QILLD L +
Sbjct: 127 DQQFAYIQSQITAVQSKFLRGDDGVDRWTEQTHWNAVLKNVKIVVSTYQILLDALSHGFV 186
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ + +++ DE H+ H A IMT FYH + + +PRI G+TASP V S+
Sbjct: 187 SMETLALIVFDEAHNCVKSHAGAKIMTNFYHG-RKASNLGVPRILGLTASP----VMRSD 241
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-----LYTHLA 254
KI ++ + SE L +P K Y P A T
Sbjct: 242 PRSLVKIEEVLDAICRTPSKHRSELRLQVKLP----KLVTVLYQTAPQAGSEGHTKTMKT 297
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN-STLLYCLSELGVW--LALKAAETI 311
E A ++ T L L++ +E RKK ++ + +C S++ + A K +
Sbjct: 298 LEDAFSNMEVTADPWYLYLSKDTSEKGRKKFDRLRINHNTWCHSQMKSFHTTATKILRDL 357
Query: 312 SCYESDFFAWEQL-------DGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD 364
+ +D++ + + +G S A + +T V E S F D
Sbjct: 358 GAWAADYYVSQVIRKLTKVANGSATHTDLSDMSKAEKLHLTKVLQQVELSQRSCLGFE-D 416
Query: 365 SGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYIA 423
LL++K+ LI+ LL I+FV+ R + + QS+ + L + + A
Sbjct: 417 LHLLSDKVTKLIDVLLNEPA--SFSGIVFVQVRDLATLDRQSMKTYLTTGAS--DSSHPA 472
Query: 424 GNNSG---IQCQSR--------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
++ G ++ + R +Q + F+ G +N+ +ATS+LEEG+DV +CN VI
Sbjct: 473 PSDIGTPLVRARVRNISDLIDLNEQKHTLSRFKSGQINLAIATSVLEEGIDVPACNTVIC 532
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
F + SF+Q RGRAR ++S +L+ D ++ + MRK
Sbjct: 533 FQAPANIKSFVQRRGRARHRDSRLVLLSDYAD----GKVVEWKKLEEDMRKMYEDERRTL 588
Query: 533 CSPLNNHMYGED---FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM 589
S L ED + VE+TG + + ++V+ +Y +C+++P Y P+F +E
Sbjct: 589 QSLLLAEDSEEDDGRVFRVETTGALLDMDNAVAHLYHFCAKIPQSAYVDRRPEFTCCEES 648
Query: 590 GI--CTLYLPNNCPIQTVIAQG-----NIKTLKQAACLEACKKLHQIGALTDNLLPDIVV 642
G+ + LP + +AQ + K + A +A L++ G + DNLLP++ +
Sbjct: 649 GLSRAEVVLPLSVDQTVRVAQSLRPWQSEKNAIKDAAFQAYIALYKAGLVNDNLLPNLGI 708
Query: 643 E--KHDAQKRGN 652
+ HD + N
Sbjct: 709 DIVPHDLRSSAN 720
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 186/421 (44%), Gaps = 79/421 (18%)
Query: 940 FYSF-TFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLE 997
Y F F+PSIM+RL+ LA L K +L D +Q++ ++ AIT ++ H E
Sbjct: 949 LYQFGRFIPSIMYRLEKSFLATLLTKTILKDIQIQDLN----GIVTAITASSASDESHYE 1004
Query: 998 S---------LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQK 1048
+ LE LGD+ LK S QL Y HEG L+ K RI+SN+ L E
Sbjct: 1005 NIKYEANYQRLEFLGDTILKMCTSIQLMAQYPLWHEGYLTELKGRIVSNSCLYAAAIENG 1064
Query: 1049 LPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG 1108
L FI T+ F W +Y DD L G +V + + SK ADVVEALIG
Sbjct: 1065 LDRFIITKKFSGHKW------RPTY--VDDLLAMGTD-HVDKPRTMSSKIPADVVEALIG 1115
Query: 1109 AFLSTGGENVGL--------IFLDRIGIK--VDFVNVPYQRQFQVHAERLVNVRHLESLL 1158
A G +G IF+ RI + ++ +QR V + +R LE +L
Sbjct: 1116 ACYEDG--EMGFEKPLQCLKIFIPRIDWQPLAQSQSLLFQRAPNVELPQ--TLRILEDML 1171
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LSPGY 1216
Y F + LLVEA+TH SY L +RLEFLGDA+LDYL+ L G +S
Sbjct: 1172 GYEFNNKGLLVEAVTHASYNLGSA--SLERLEFLGDAILDYLVVERLMQTEDGTFISHVK 1229
Query: 1217 LTDMRSASVNNDCYALSSVKH---------------------------GLHKHILHASHE 1249
+ +R+A VN D A ++ L K + H S
Sbjct: 1230 MHLIRTALVNADILAFLCMEFHTTQEVIDLEIQPDGGSPQERPKMATLPLWKFMRHTSSA 1289
Query: 1250 LYKRINITVDSFEKLS--------LGSTFGWE--SVTSFPKALGDIIESLAGAIFVDSGC 1299
+ + + + L+ G + W + PK D++ESL GA++VDSG
Sbjct: 1290 IAAEQQVAAELHDLLAPKIRDVFDSGKNYPWALLARQQAPKFFSDLVESLIGALYVDSGL 1349
Query: 1300 N 1300
+
Sbjct: 1350 D 1350
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD +L ++ L +YP GYLT+++ V+N C +++++GL + I+
Sbjct: 1012 YQRLEFLGDTILKMCTSIQLMAQYPLWHEGYLTELKGRIVSNSCLYAAAIENGLDRFIIT 1071
Query: 1246 ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
+K VD L++G+ + T K D++E+L GA + D E
Sbjct: 1072 KKFSGHKWRPTYVDDL--LAMGTDHVDKPRTMSSKIPADVVEALIGACYEDGEMGFEKPL 1129
Query: 1306 QSIRPLL-----EPMITPETMRFH 1324
Q ++ + +P+ +++ F
Sbjct: 1130 QCLKIFIPRIDWQPLAQSQSLLFQ 1153
>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1402
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 187/707 (26%), Positives = 307/707 (43%), Gaps = 111/707 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQLE L +LK N IV ++TGSGKT IAI+ +R A L V FL P V+L
Sbjct: 27 SRAYQLEMLRRSLKDNVIVAMDTGSGKTQIAILRIR--AQLESTSDQKVIWFLAPTVLLC 84
Query: 82 PQQAEAIKMHT-DLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ +AIK+ + + G V W +TWK ++ + +V T Q+LLD L ++ K
Sbjct: 85 AQQFDAIKLEIPSISMRLVVGSDNVHTWSSSTWKSLLNGTQAVVSTYQVLLDALDHAFVK 144
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYH--RLLETGD--SNLPRIFGMTASPIKSKVS 196
L+ + +LI DE H+ G + IM FYH L + D SN P I G+TA+P
Sbjct: 145 LDRLSLLIFDEAHNCVGSNPGGKIMKHFYHYQGLRQDADDGSNRPAILGLTATP------ 198
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
S + + + + LE ++N+ C S S+ + K + E A H +
Sbjct: 199 -SMKAHIKGVEKLEQVLNA---ICVSPSLHREEL-LKHVKRPQLRIIECETAATEHFTET 253
Query: 257 LAMIELKHTRSLENLDLNEAQ--AELIRKKVSKINSTLLYCLSELGVWLALKAAETIS-- 312
++ + + +D+ E L + + L L + W + + +S
Sbjct: 254 MSSLH----QECAKMDILEDPYVVSLCAQNDDRSKRCLAKVLIDEKTWSRHQLSSLLSRS 309
Query: 313 --------CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP---------------- 348
+ +DF+ W+ F + + S L +VP
Sbjct: 310 RIIRQLLGPWAADFYIWKAKRSFLQNVKSTVPS-----LDGWVPEEKLYVARILQDVAAL 364
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLL 407
A IG DS +++K+ L+ L+ ++G D+ IIFV ER A++ L
Sbjct: 365 EPAPRPIGYDS--------ISDKVGLLLRELIMHKG--DVTGIIFVQERATAAVLAALLH 414
Query: 408 SELLPRHCTWKTKYIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVIVATSI 457
S +P+ + +Y G G +K + + +++FRRG VN++VATS+
Sbjct: 415 S--IPK---IRERYRVGCMVGTSHNHLRKASLYEVLDSSDCKTLQDFRRGEVNLLVATSV 469
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT------QSRL 511
LEEG+D+ +CNLVI FD + SFIQ RGRARMQ+S ++ G S T + +
Sbjct: 470 LEEGIDIPACNLVICFDSPKNPKSFIQRRGRARMQDSQLIIFTHQGHSLTDHWAIFEDEI 529
Query: 512 ENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF-YHVESTGTIATLSSSVSLIYFYCSR 570
+ + R+++ + L DF + V TG ++ + +C
Sbjct: 530 QKLCQDSERERQQLQT--------LERLDEDVDFCFRVPHTGARLDPENAKQHLEHFCRV 581
Query: 571 LPSDGYFKPTPKF--------HINKEMGICTLYLPNNCP-----IQTVIAQGNIKTLKQA 617
+ S Y P + H + ++ ++LP + P Q++ + + +
Sbjct: 582 ISSQEYTDGRPDYITKFTSGDHDHDQLVSAEVFLPASLPTKLRHFQSLRSWRSEANAMKD 641
Query: 618 ACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFP 664
A +A L+Q G + NLLP D + R P P++ P
Sbjct: 642 AAFQAYLALYQAGLVNKNLLPLETNIDFDVESRA--PIIPVEPLFDP 686
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 213/456 (46%), Gaps = 65/456 (14%)
Query: 930 IIMAPISLSTFYSF--------TFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIK 980
I + P+S +T S +PSI+H ++++L+A +L LL + + ++
Sbjct: 891 ITVLPVSFATVDSIHIKHARFGMLIPSIIHTIETMLIARHLSVTLLKPLELTDYSL---- 946
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
V +AI+ + E + E LE LGDS LK+ AS Q T + EG L+ K+R+++N+ L
Sbjct: 947 VRDAISARSAYEPTNYERLEFLGDSILKFCASMQAGATNLSWPEGYLTRYKDRLVANSRL 1006
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
+ E L FI T F + W + +++ +G K+ ++++ +K +A
Sbjct: 1007 SRAAVETGLAKFILTVPFTAQKW---------HPFFLETILSG-KMKPFKKREMSTKVLA 1056
Query: 1101 DVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ--FQVHAERLVNVRHL---E 1155
DVVEAL+G GG + L + D+++ R+ F V+ +L E
Sbjct: 1057 DVVEALVGVAYIAGGIPKAIQCLSIFINECDWIDPSECREEFFACAPSHCVDSSYLHILE 1116
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
L+ YSF SLL+EA TH SY+ R ++RLEFLGDAVLDY+I L N+ P L
Sbjct: 1117 ELIGYSFTKKSLLLEATTHASYIGDISGRSWERLEFLGDAVLDYMIVSKLMNRSPPLPHS 1176
Query: 1216 YLTDMRSASVNNDCYALSSV-----------------------KHGLHKHILHASH---- 1248
+ +++A VN D A S+ + L + I H+S
Sbjct: 1177 RMHMIKTAMVNKDFLAFLSLEEHELSQTESFVTEDGVVLTTNKRSALWRFIRHSSSGIGP 1236
Query: 1249 ---ELYKR-INITVDSFEKLSLGSTFGWESV--TSFPKALGDIIESLAGAIFVDSG---- 1298
E KR N+ ++ +L G+ + W + K D+ E+L GAI+VDSG
Sbjct: 1237 AQLETAKRHENLRLEILHELHHGTHYPWHILLKQQASKFYSDLFEALVGAIWVDSGSLAT 1296
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQ 1334
C+ + + P LE ++ HP EL Q
Sbjct: 1297 CDAFLRRIGMLPYLERVLADSLHMQHPKEELGGLAQ 1332
>gi|389635425|ref|XP_003715365.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|374095503|sp|A4RHU9.3|DCL2_MAGO7 RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|351647698|gb|EHA55558.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|440467937|gb|ELQ37130.1| hypothetical protein OOU_Y34scaffold00618g20 [Magnaporthe oryzae
Y34]
gi|440483523|gb|ELQ63906.1| hypothetical protein OOW_P131scaffold00922g30 [Magnaporthe oryzae
P131]
Length = 1485
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 195/701 (27%), Positives = 307/701 (43%), Gaps = 101/701 (14%)
Query: 4 VSMESDTTEEVSADTLP--------FARNYQLEALENALKQNTIVFLETGSGKTLIAIML 55
S S T + +S + P AR YQLE + +++QN IV ++TGSGKT +A++
Sbjct: 39 ASTHSTTDDAISEEPQPSGNGPRSIIARAYQLEMFQASMQQNIIVSMDTGSGKTQVAVLR 98
Query: 56 LRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGK---YWGDMGVDFW-DGA 111
+R A L R P FL P V L QQ E I+ + +KV GD VD W D
Sbjct: 99 IR--AELERTPPEKRVWFLAPTVALCAQQYEVIR--SQIKVANSIVMTGDDNVDSWSDVQ 154
Query: 112 TWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHR 171
TW ++ V+V T IL + L ++ ++ I +L++DE H+ GK IM FY
Sbjct: 155 TWDAVLANVRVVVCTYMILFEALSHAFVTMDSISLLVMDEAHNCTGKFPGRLIMKRFYMP 214
Query: 172 LLETGDSNLPRIFGMTASPI-KSKVSSSEQDYWQKIHDLETLMNS--KVYTCASESVLSN 228
GD ++P I G+TASP+ KS +SS E DLE+ ++S + T E + +N
Sbjct: 215 RKSAGD-HVPHILGLTASPVMKSDLSSME--------DLESSLDSVCRGPTLQREELFAN 265
Query: 229 FIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQ--AELIRKKVS 286
+ + + D YT + L + + ENLD+ E L+ ++
Sbjct: 266 VHQPTMTVTTYKECDLRSPVQYTRNMNNLHL-------AFENLDIAEDPYVLHLMGQRTP 318
Query: 287 KINSTLLYCLSELGVWL--ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALV 344
K L L++L + +KA + S +D + +++K V
Sbjct: 319 KSLRELDRILTKLDTYTQNQMKALQRKSSSLFRELGQWAVDSYIYNVVEK---------V 369
Query: 345 TYVPSGAEWSIG--DDSKFNLDSG-----------------LLTEKIVCLIESLLEYRGV 385
+ + + + W G DD + L + + K+ L+ L Y G
Sbjct: 370 SNLDARSSWLGGWLDDEQRYLHRAIQGINALPVSAAIPAPEMTSIKLQVLLRILRGYEGS 429
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK-------KQN 438
I+FV+ TA +L LL+ + + +K + G + + SRK +Q
Sbjct: 430 P--VGIVFVKERATAGILSQLLAIIPDINARYKVGCMVGTS---RYMSRKMNIHEVLQQG 484
Query: 439 E---IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
+ +E+FR G +N++VATS+LEEG+DV CNLVI FD + SFIQ RGRARM+ S
Sbjct: 485 DDLLALEKFRSGAINLLVATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRGRARMRESK 544
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKE-----------VLSHASLPCSPLNNHMYGED 544
LM++ DS + L + K R E V + PL++
Sbjct: 545 LHLMIEE-DSLVSVKDWGALEAAMKQRYENDMRELDHLAQVEEEDEMDVPPLHSRTTAAK 603
Query: 545 FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPI 602
++ G + V+ Y P T F K + I T+ LP + P
Sbjct: 604 VTVDDAKGHLEHFCRVVTRSQQYVDASPEYLVTTKTTAFVGGKPIPILGVTVLLPASLPP 663
Query: 603 QTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
A + + K+ A L+A K L++ G + ++LLP
Sbjct: 664 NLRQAHSSRDWISERNAKKDAALQAYKMLYEAGLINEHLLP 704
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 205/504 (40%), Gaps = 93/504 (18%)
Query: 909 RQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 968
++ + P + + +P +LC P +L VPSI ++ +A + +L
Sbjct: 940 KEYQTSSPRRFDYIIPEQLCTFDTVPATLVQL--GMLVPSITQAMEPYFVA---QELLRR 994
Query: 969 HCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
+ ++ I V+ IT+ + E +E LGD+ LK A+ + EG L
Sbjct: 995 TALGSLDFKDIDLVMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFPEGYL 1054
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIY 1087
S+ K+R++SN+ LCK L FI T + K W ++ +
Sbjct: 1055 SLLKDRLVSNSRLCKAATALGLDQFIITRQYSLKQW--------------RNMLTAPE-P 1099
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER 1147
T +K+ SKT+ADV EALIGA GG + L + + +P +R + R
Sbjct: 1100 PTNTRKMSSKTLADVTEALIGAAYIEGGMSKALRCISLM--------IPNERWRSLDESR 1151
Query: 1148 LV-------------NVRHLESLLNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLG 1193
V + LE LL YSF SLL+EA+TH SY +P +RLEFLG
Sbjct: 1152 AVLYQVALNDIPLPSTLGPLEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFLG 1211
Query: 1194 DAVLDYLITVYLYN-KYPGLSPGY-LTDMRSASVNNDCYALSSVK--------------- 1236
D+VLD+++ L++ K P Y + +R+A VN + +++
Sbjct: 1212 DSVLDFVVVARLFSVKDPAPIEHYNMHLLRTAVVNGEFLGFLAMEWRTAATQRSVVVRTG 1271
Query: 1237 -----------------HGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFP 1279
G +H +AS + + + + +++ G E +P
Sbjct: 1272 QGTADELETVETPGLPLFGFLRH--NASGDWVRDQQLAEERHAEMAPGIRDALEHGQRYP 1329
Query: 1280 ----------KALGDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITPETMRFHP 1325
K D++E++ GA++VDSG C + + I L+ + HP
Sbjct: 1330 WDLLARLRISKVHSDVLEAVIGAVWVDSGSLEECEKLIERVGILRYLDRALRDGVKILHP 1389
Query: 1326 VRELTEYCQKNHFSMKKPVASRIS 1349
EL Q N K A R +
Sbjct: 1390 KEELGRVAQNNKVVYKVDKAKRAA 1413
>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1400
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 181/677 (26%), Positives = 289/677 (42%), Gaps = 103/677 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ E ++ +LK+N IV ++TGSGKT IAI +R+ LR + FL P L
Sbjct: 23 RSYQTEMVDRSLKENIIVAMDTGSGKTHIAIARIRAEVERLRDNR--LVWFLAPSRTLAE 80
Query: 83 QQAEAIKMHTDLKVGKYW-----GDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRL 136
QQ A+ DL++ Y G GV+ W D W ++ +V++ TP +L D L
Sbjct: 81 QQYRAL----DLELSAYGVRLLTGADGVEKWTDQRLWDAVLTNIKVVIATPAVLKDALAH 136
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ ++ + + + DE H K IM FY E G+ +P I G++ASP+ S
Sbjct: 137 GFVTISRLALCVFDEAHRCTKKAPMNQIMQLFYRPARERGEP-VPHILGLSASPVTSVKQ 195
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
+ +H L + K + E + N T +F H L D
Sbjct: 196 GGLETIESNLHSLA--VTPKTHRTELEKHV-NLPELLTIRFSE------SHTASNRLCDA 246
Query: 257 LAMIELKH--TRSLENLDLNEAQAELIRKKVSKIN-STLLYCLSELGVWLALKAAETISC 313
LA+ + R + L + RK + ++ YCL +L L +AA
Sbjct: 247 LAVAARSYDLARDPYFVALTGQHDDRSRKILQQVQLKQETYCLQQLRA-LDTRAARLHKQ 305
Query: 314 YESDFFAWEQLDGFGETIIKKFG-------------SDASQALVTYVPSGAEWSIGDDSK 360
W + T I++F S+A + + + E G
Sbjct: 306 LGPSMAQW-----YISTCIRRFRQGMSSENFLMPDLSEAERKHLLEIFEDVEQHAGPAVA 360
Query: 361 FNL--DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
D+ +++EK L++ LL++ + C+IFVE+ + L LL + ++K
Sbjct: 361 LGTVDDTLVISEKARLLLQILLQH-AEPGVHCLIFVEQRVQVTALAELLRRVPALEDSYK 419
Query: 419 TKYIAGNNSGIQCQ-------SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
G ++ + + Q++ ++ FR G NV+VAT++LEEG+D+ +CNLVI
Sbjct: 420 IAGFVGTSTNTNRKISVADLVALSDQSKDLQAFRDGHKNVMVATNVLEEGIDISACNLVI 479
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL 531
FD + + SF+Q RGRAR +S Y L V EN A GNK
Sbjct: 480 CFDAPKNLVSFVQRRGRARRTDSKYFLFVS----------ENESAKGNK----------- 518
Query: 532 PCSPLNNH---MYGED--------------FYHVESTGTIATLSSSVSLIYFYC--SRLP 572
P S L MY +D Y V STG + T+ ++S +Y +C S
Sbjct: 519 PWSALEAEMKAMYMDDSRQLQLRPSEKPPRVYGVASTGAMMTMDDAMSHLYHFCSVSTKH 578
Query: 573 SDGYFKPTPKFHIN------KEMGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEAC 623
++ Y P+F + + L + + ++ + +T ++A A LEA
Sbjct: 579 ANNYIDLRPEFETSLNEITTRWSASVDLPMTVHPSVRHANSAKPWETEEEAIKDAALEAY 638
Query: 624 KKLHQIGALTDNLLPDI 640
LH+ G + DNLLP I
Sbjct: 639 IALHRAGLVNDNLLPLI 655
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 199/410 (48%), Gaps = 56/410 (13%)
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL-EAIT 986
C I + P + F +F VPSI++RL++ LL +L ++ ++++ + ++ EAI+
Sbjct: 878 CTIDVLPAKYALFSAF--VPSILYRLETSLLVRDL----METALKDIALTDHALIKEAIS 931
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
+ E LE LGD LK+ Q+ + + E L+++++RI+ N+ L K E
Sbjct: 932 SPAAGEPTDYNRLEYLGDCVLKHYTELQVMSQHTDWPEAYLTLERDRIVRNSNLAKAALE 991
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEAL 1106
++L +I TE F + W P + + D + ++++ +KT+ADVVEAL
Sbjct: 992 RELDKYILTEPFTGRKWRPP---YATEHVKDQA----------AKRQMSTKTLADVVEAL 1038
Query: 1107 IGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-QVHAERLVNVRHLESLLNYSFRDP 1165
IGA G + + + + N ++ ++ A + NV LE+L+ ++F P
Sbjct: 1039 IGAAYLEGDTEKAFQCIRVLLPQEKWSNDCFETLIAELTACPVANVLLLETLIGHTFSHP 1098
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
+LLVEA THGS + Y+RLEFLGD+VLD +IT L++ L L + +A V
Sbjct: 1099 TLLVEATTHGSCPANKTGMSYERLEFLGDSVLDMIITPKLFSHPRKLKHWQLHSVHAALV 1158
Query: 1226 NNDCYALSSVKHGLHKH---ILHASHELYKRI-------------------NITVDSFE- 1262
N+ +++ +++ I+ + Y + NIT + E
Sbjct: 1159 NSHLLGYCCLRYYINQEMFDIVQTTSGNYDSVSARRKTHLYEFMRAGAQVNNITCQAVEH 1218
Query: 1263 ----------KLSLGSTFGW-ESVT-SFPKALGDIIESLAGAIFVDSGCN 1300
L+ G + W E VT S PK D++ES+ GAIF+D+ N
Sbjct: 1219 FHECSSQIEKALAHGIEYPWVELVTLSPPKFFCDLVESILGAIFIDTHGN 1268
>gi|156044530|ref|XP_001588821.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980]
gi|154694757|gb|EDN94495.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1515
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 191/692 (27%), Positives = 303/692 (43%), Gaps = 103/692 (14%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
+ EE + R YQLE LE +LK N IV ++TGSGKT +A+ LR A L R
Sbjct: 95 SEEEKGKNVTVTPRTYQLEMLEESLKGNIIVAMDTGSGKTHVAV--LRILAELERMEPDK 152
Query: 70 VAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTP 127
+ FL P V L Q E ++++ + + V G GVD W + W + ++ V
Sbjct: 153 LIWFLAPTVALCTQHNEYLQLNISSVLVKLLVGSDGVDRWTEQRQWDAILKDVKIAVSPY 212
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
Q+LLD L + ++ + ++I DE H+ K A IMT FYH S LP I G++
Sbjct: 213 QVLLDALAHGFVRMERLSLIIFDEAHNCLNKAPGAKIMTSFYHPYKSI--SPLPHILGLS 270
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNS-KVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
ASP+ + S Q + L+ + + K++ ++ L +P +Y+ P
Sbjct: 271 ASPV---IRSDPQSLSKIEETLDAVCRTPKIHQ--ADLRLRVKLPI----LSIIEYNPEP 321
Query: 247 HALYTHLADELAMI-------ELKHTRSLENLDLNEAQAELIR-----KKVSKINSTLLY 294
L T L + E + +L++ ++Q EL + K S+ L+Y
Sbjct: 322 EYLMTKTVASLGKVIQDLNISEDPYVLALKSSGSEKSQRELAKLLNNYKTNSQRELRLIY 381
Query: 295 -----CLSELGVWLA--------------LKAAETISCYESDFFAWEQLDGFGETIIKKF 335
L ELG W A +KA E D A E+L + +K+
Sbjct: 382 NTGKTILVELGSWAADYYISAVVTKYLKTMKAREVFVVM--DLAATERL--YIAKALKQV 437
Query: 336 GSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE 395
G S + +S+ D + ++K+ L+ +L+ IIFVE
Sbjct: 438 GI-----------SPSVFSLADKT---------SDKVAKLLNIILQQE--PPFSAIIFVE 475
Query: 396 RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK-----------KQNEIVEEF 444
T VL LLS+ H K ++ G G S++ KQ + + F
Sbjct: 476 ERATVFVLADLLSQ----HPLTKERFKIGTMVGSSSNSKRTQIVGELVDLDKQKDTLSRF 531
Query: 445 RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
+ G +++++AT++LEEG+DV++CNLVI F + SFIQ RGRAR Q+S +L+ G
Sbjct: 532 KLGKIDILIATNVLEEGIDVRACNLVICFSKPSNLKSFIQRRGRARQQDSKLILLDPLGG 591
Query: 505 STTQ-SRLENYLAS--GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSV 561
LE + N+MR+ L H S + VESTG L ++V
Sbjct: 592 KVIDWHELERNMRKMYENEMRE--LQHIS-EIETADEQSEDGRVLRVESTGAQLDLDNAV 648
Query: 562 SLIYFYCSRLPSDGYFKPTPKFHINKEMGI----CTLYLPNNCPIQTVIAQG-----NIK 612
+Y +CS L + + P F + ++G + P + P + + + K
Sbjct: 649 PHLYHFCSVLTAKDFVDLRPDFVYSFDLGTDFVRAKVIFPLSVPETLRVHESRGVWLSEK 708
Query: 613 TLKQAACLEACKKLHQIGALTDNLLPDIVVEK 644
+ A EA L++ G + DNLLP +V +K
Sbjct: 709 GAAKDAAFEAYVALYKGGLVNDNLLPLMVHDK 740
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 208/481 (43%), Gaps = 82/481 (17%)
Query: 903 NYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL 962
++L K Q + S LP +C P L F +PSI H ++ L+ L
Sbjct: 946 DFLHKVENQSPSSSKQFSCVLPASVCVQDAMPFQLVQFG--MMIPSITHHIEVQLIVDRL 1003
Query: 963 -KNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
K +L D + + + V AIT + + LE LGDS LK S QL Y
Sbjct: 1004 CKTILKDLEISDRGL----VQTAITHASYSLTSNYQRLEFLGDSILKLCTSVQLISEYPL 1059
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLF 1081
EG LS K+RI+SN+ + E L +I T+ F W
Sbjct: 1060 WPEGYLSAMKDRIVSNSRSSRAAVELGLDEYIITKKFTGSKW------------------ 1101
Query: 1082 NGRKIYVTG--------RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV 1133
R +YV +++ SK ++DVVEALIGA + GG L L +++++
Sbjct: 1102 --RPMYVEDYLKTTEQKSRQMSSKVLSDVVEALIGACMVDGGIPKALKSLQLFFPELNWL 1159
Query: 1134 NVPYQRQ--FQVHAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
+ ++ +Q+ A+ L + ++ +E +L Y+F SLLVEA+TH SY+ + +R
Sbjct: 1160 PLETRQMSLYQLAADDLHLPIALQPIEQILAYTFTKKSLLVEAMTHPSYI--NGTQSLER 1217
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL---- 1244
LEFLGDA+LD +I +++ LS + +RSA VN D A ++ + +++
Sbjct: 1218 LEFLGDAILDNIIVTAMWSYETELSHFQMHLLRSALVNADFLAFLCMEMSIEQYVTDLTE 1277
Query: 1245 ---HASHELYKRINITVDSFEK---------------------------LSLGSTFGWES 1274
H HE + R ++ +F + + G F W
Sbjct: 1278 GKDHQIHETHTRRRFSLVNFLRHSSATFSIYQKQALARHQELREEILAVIKTGDKFPWTL 1337
Query: 1275 VTSFP--KALGDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
++ K D+IESL GAI++DSG C R V I + ++ HP E
Sbjct: 1338 LSRLDARKFFSDMIESLLGAIWIDSGSIDVCTRVVERMGILRYMRRILREGVRIMHPKEE 1397
Query: 1329 L 1329
L
Sbjct: 1398 L 1398
>gi|119487463|ref|XP_001262524.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
gi|158705692|sp|A1D9Z6.1|DCL2_NEOFI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119410681|gb|EAW20627.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
Length = 1388
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 174/669 (26%), Positives = 309/669 (46%), Gaps = 88/669 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
RNYQLE LE ++K+N IV ++TGSGKT IA+ LR A L P + FL P V L
Sbjct: 17 RNYQLEMLEASMKENIIVAMDTGSGKTHIAV--LRIKAELDICPPDKLVWFLAPTVALCI 74
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ E I + ++ G V+ W + + W ++ + V+V T +L D L + K
Sbjct: 75 QQHEVIASNLPAVRTRTLTGLDKVELWTEQSIWDAVLNGYRVIVSTHAVLADALSHGFVK 134
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++ + +LI DE HH +H IM +FYH L ++G +PRI G+TASP+ V S+
Sbjct: 135 MSRLALLIFDEAHHCTRRHAANKIMRDFYHPTLTKSGPGAVPRIMGLTASPV---VRSNH 191
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADEL 257
Q +L T+ ++ C + V + + K+ PH ++ D
Sbjct: 192 Q-------ELLTVESNLDAVCRTPRV---------HRQELVKFTHRPHLQQIWYTPTDPA 235
Query: 258 AMIELKHT-----RSLENLDLNEAQAELIRKKVSKINSTLL---------YCLSELGVWL 303
T + E LD+ + + R + S ++ T L YC +L ++
Sbjct: 236 GFKSASQTLGALYHAWETLDIGD-DPYIQRLRKSPLDDTALKKALLTGKTYCREQLRRFV 294
Query: 304 --ALKAAETISCYESDFFAWEQLDGFGETIIKKFGS-DASQALVTYV--------PSGAE 352
+ E + + ++++ + + G+ + + S D +A Y+ S +
Sbjct: 295 DRSRHIFEELGEWAAEYYIYASIKQLGDRVRNSYMSGDWDEAEKAYLVDFLSKIPASEIQ 354
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
++ D F + E ++ ++SL E + +IFV++ T + SLLS + P
Sbjct: 355 LALNDPGSFRISPKF--ESLLNFLDSLDE----REFSGLIFVKQRATVSAMTSLLS-VHP 407
Query: 413 RHCTWK----TKYIAGNNSGIQCQ------SRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
CT + Y+ +N + + Q + +++FR G N+I+AT +LEEG+
Sbjct: 408 --CTRERFRCAAYVGWSNGSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGI 465
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ----SRLENYLASG 518
D+ +C++V+ +D + SF+Q RGRAR + S + +M + D++ LE +
Sbjct: 466 DISACSVVVCYDKPPNLKSFVQRRGRARRKQSTFAIMFPTDDASADVSKWQDLEQAMIEA 525
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY-- 576
+ + L S L+ + + VEST + T +++ ++ +C+ LP Y
Sbjct: 526 YQDDERQLQSVS-ALESLDEEVM--ERLTVESTSAVLTADMAMAHLHHFCAVLPPQPYAD 582
Query: 577 FKPTPKFHINKEMGIC--TLYLPNNCPIQTVIAQGN--IKTLKQA---ACLEACKKLHQI 629
+P F N++ G+ T+ LP+ + +G +T + A +A K L++
Sbjct: 583 MRPVFSFETNED-GLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQAYKALYEF 641
Query: 630 GALTDNLLP 638
G + D+LLP
Sbjct: 642 GLVNDHLLP 650
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 199/452 (44%), Gaps = 61/452 (13%)
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE--LPPELCRIIMAPISLSTFYSFTFVPS 948
P + R + H Q + ++ P + + + C I P +++ F F+ +
Sbjct: 851 PFPHRRNLLHRQRLANSQVDVDEETPESAAKNPIVAADACTIDRLPFTMAIF--GLFISA 908
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
I+ RL++ L+A L+ +L ++V T ++ AI+T + + E LGDS L
Sbjct: 909 IVERLETELIATRLRETIL----RDVGFKSTDHIITAISTPFAHALTNYQRYEFLGDSIL 964
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K++ S QLF + N HEG LS + I+ N L K + L +I T+ + W P
Sbjct: 965 KFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAYIVTKRIASRKWSAP- 1023
Query: 1068 DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG 1127
L + + V ++++ +K +ADVVEALIGA GG + R+
Sbjct: 1024 ------------LISEKLERVPAKRQMSTKVLADVVEALIGAAYMDGGHATAQACIRRLL 1071
Query: 1128 IKVDFVNVPYQ---RQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 1184
+++ V + R + R + L+ + Y+F D SLLVEALTH S +
Sbjct: 1072 PEINLHAVDTRTATRSVAPESARHMMNERLKDHIGYTFEDESLLVEALTHPSCDYDSTTQ 1131
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
YQRLE+LGDAVLD +I ++N G +T ++ A VN + A ++ + L
Sbjct: 1132 SYQRLEYLGDAVLDMVIVSAIFNHPIQRPQGDMTKIKHAVVNANLLAFLCMESATSEEKL 1191
Query: 1245 HASH---------------ELYK-------RINITVDS------------FEKLSLGSTF 1270
+ EL++ +N D+ L +
Sbjct: 1192 DVAQTSKDSFAVTTSQESVELWRFMRYRGQNLNAARDASLARHRALRDEIASSLLHAPHY 1251
Query: 1271 GWESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
W +++ K DI+ES+ GAIFVDSG +
Sbjct: 1252 PWHALSRLNADKFFSDIVESVLGAIFVDSGGD 1283
>gi|356518185|ref|XP_003527762.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 455
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 156/302 (51%), Gaps = 14/302 (4%)
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV-----NV 1151
KT+AD VEALIGA+ GG L + +GI V+ + ++
Sbjct: 126 KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLDEAITAASLSTCVPIESDI 185
Query: 1152 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
LE + Y F LL+EA+TH S I CY+RL+FLGD+VLD LIT +LY +
Sbjct: 186 ASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLYQSHTD 245
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG 1271
+ PG L D+RSASVNND +A +V+H LH+H+LH+S L +I E + + S
Sbjct: 246 IDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQI------LEYVKVISESD 299
Query: 1272 WESVTSF--PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVREL 1329
S+ S PKALGD++ES+ G I + + + + V+ PLL P++TP+ + P REL
Sbjct: 300 PRSLPSIRAPKALGDVVESIVGPILIGTKLSLDQVWNVFYPLLSPIVTPDKLELPPFREL 359
Query: 1330 TEYCQK-NHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
E C HF K ++ V V VQ L +KKTAK A +LK
Sbjct: 360 NELCDSLGHFVKVKENCEKMGSAMHVEVSVQLPNALLVREGKGPNKKTAKGEAAFHLLKD 419
Query: 1389 LR 1390
L
Sbjct: 420 LE 421
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 25/86 (29%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+E E A ++NTI L+TGSGKTL A+ML++
Sbjct: 47 RGYQIEVYEVARRRNTIAVLDTGSGKTLNAVMLMK------------------------- 81
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFW 108
+Q + +K TD +V +Y+G GVD W
Sbjct: 82 EQFKNMKFLTDFQVEEYYGAKGVDTW 107
>gi|342877213|gb|EGU78706.1| hypothetical protein FOXB_10811 [Fusarium oxysporum Fo5176]
Length = 927
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 187/680 (27%), Positives = 288/680 (42%), Gaps = 114/680 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E LE +LK+N IV ++TGSGKT +A+ LR A L R + FL V L
Sbjct: 70 RAYQREMLEQSLKRNVIVAMDTGSGKTQVAV--LRIQAELERSSPNKLVWFLGKTVSLCE 127
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ IK + + G + +D W W + ++V T IL D L ++ +
Sbjct: 128 QQFNVIKRQMPSVPMRLLTGQLNIDAWSPEVWPRILKGTHIIVSTFSILRDALDHAFVTM 187
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+M+ +++ DE H+ IM FYHR G +P I G+TASPI +SS
Sbjct: 188 DMLALIVFDEVHNCVKNSSGRKIMMNFYHRHKNVG-MPVPAILGLTASPI---ISSD--- 240
Query: 202 YWQKIHDLETLMNSKVYTCAS--ESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADEL 257
++I LE M++ T + E +L + + Y +IP L L E
Sbjct: 241 -LKEIEKLENTMDAICVTPTTHREQLLKHVNKPHLIRL-LYDATKIPPRTPLMQQLQSEY 298
Query: 258 AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESD 317
+ +++ + L + E R+K+ + + D
Sbjct: 299 SNMDIAKDPEVLKLKALVSNDEKKREKLMNV------------------------IMKHD 334
Query: 318 FFAWEQLDGF---GETIIKKFGSDA-----SQALVTYVPSGAEWSIGDDSKFNLDSGLL- 368
F+ +Q+ G I+ + GS A SQ + T++ +S D+ N D L
Sbjct: 335 TFSQQQIRGLWNKSREILAELGSWAVDHYISQMIKTFLDRIDAYSTFTDAWSNEDRTYLA 394
Query: 369 ---------------------TEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
+ K LI LL D+ IIFV+ A L LL
Sbjct: 395 GHLRRINIGVVDNSPPTAQTVSHKTSRLIHELLAAEN--DVVGIIFVKERTAAHTLCELL 452
Query: 408 SELLPRHCTWKTKYIAGNNS-GIQCQ-----SRKKQNEIVEEFRRGLVNVIVATSILEEG 461
+ P + I G +S G+Q Q S +++++FR G +N++VATS+LEEG
Sbjct: 453 NNYPPIRDRYHVGAIVGASSYGLQKQKVYEYSSGPGPQVLDDFRSGAINLLVATSVLEEG 512
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+DV +CNLV+ FD T+ SFIQ RGRARMQ S + ++ S+T R L G K
Sbjct: 513 IDVPACNLVVSFDEIATLKSFIQRRGRARMQESKMIALLS---SSTDIRAWEELEKGMKE 569
Query: 522 RKEVLSHASLPCSPLNNHMYGED----FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF 577
R E + L+ E+ +Y V++TG L ++ + +C + Y
Sbjct: 570 RYE---DDQRELARLDEQARAEEIDSTYYIVKNTGARLDLDNARQHLDRFCQIVFRSDYV 626
Query: 578 KPTPKFHINKE-------MGICTLYLPNNCPIQTVIAQGNIKTLKQA------------A 618
P + +KE + T+ LP P+ N++T K A A
Sbjct: 627 GQLPDYVFHKEETPYGGPILRATVTLPGGLPL-------NLRTFKSACGWKSERNAMRDA 679
Query: 619 CLEACKKLHQIGALTDNLLP 638
+A L++ G +TDNL P
Sbjct: 680 AFQAYVALYEAGLVTDNLAP 699
>gi|325091272|gb|EGC44582.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H88]
Length = 1432
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 216/455 (47%), Gaps = 57/455 (12%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C ++P++ + +N L + +Q++ E + ++ + PE RI + +
Sbjct: 893 CDWKQPVVRAELVRLRRNLLDRATEQERGE--ETAYYICPEPLRI--SALPPPVAAFAFA 948
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT------KKCQEDFHL--- 996
P+I+ R++S L+++ + L ++I T LEA+T + +E H
Sbjct: 949 FPAIISRIESYLISLEACDKL------QLSIETHLALEALTKDSDNTEEHRKEQIHFQRG 1002
Query: 997 -----ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGD FLK A S LF +N E VK+ +I N L KL
Sbjct: 1003 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYE 1062
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK--VKSKTVADVVEALIGA 1109
F+RT+ F + W G L G+ + + K + KT+AD+ EALIGA
Sbjct: 1063 FVRTQGFSRRNWYPEGIK----------LLQGKAKSESAQNKQALGDKTIADICEALIGA 1112
Query: 1110 FLSTGGENVGL--------IFLDRIGIKV-------DFVNVPYQRQFQVHAERLVNVRHL 1154
L +GG+ +F+D +V D ++P + Q A +L + +
Sbjct: 1113 SLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLPSYQIVQADAGQLDLAKQI 1172
Query: 1155 ESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ L Y F P LL A TH SY +P CYQRLEFLGD++LD + YLY+ YP
Sbjct: 1173 GNRLGYHFTYPRLLRSAFTHASYPSAWSTVP-CYQRLEFLGDSLLDMVCVEYLYHHYPDR 1231
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE---KLSLGST 1269
P +LT+ + A V+N +VK GLHKH+L+ S+ L+ +I + E S S
Sbjct: 1232 DPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSP 1291
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
W + + PK L D++E+ GAIFVDS + EVV
Sbjct: 1292 DAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1326
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 166/631 (26%), Positives = 269/631 (42%), Gaps = 93/631 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE E A N I L+T + P ++ FLV V LV
Sbjct: 94 REYQLELFEKAKAANIIAVLDTADRAS---------------GNPPRISFFLVDSVTLVY 138
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA +K + D + K+ G M D W TW++ SK+ ++V T ++L L S+ ++
Sbjct: 139 QQAAVLKANIDQNIDKFSGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRSFIRME 198
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +LI DE HHA+ +H YA I+ +FY R ET P+IFGMTASP+ +KV D
Sbjct: 199 HINLLIFDEAHHAKKEHPYARIVKDFYLRRPET--QKRPKIFGMTASPVDAKV-----DV 251
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIEL 262
+ +LETL++S++ T ++ L I T + + YD++ T L +
Sbjct: 252 AKAAKNLETLLDSQIATASNLDALRQAIARPTE--QIWVYDKLDATFETDLY-KCMQSRF 308
Query: 263 KHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW-LALKAAE------TISCYE 315
R LE + +A S++L +W AL+AAE +S
Sbjct: 309 GKIRELERIFFYALEA-----------SSMLGRWCSDWLWTFALEAAELPKLEGRVSKSY 357
Query: 316 SDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCL 375
+ + G E I K +A Q + + D+ + + L ++ +
Sbjct: 358 MQSSSRDHSKGLDEAI--KLLREAGQLIRNHTF---------DTPVDCPAHLSSKVRLLR 406
Query: 376 IESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG-NNSGIQCQ-- 432
E L + D +CI+FV++ TA +L L S + RH +T + G + GI
Sbjct: 407 HELSLYFERHTDTKCIVFVQQRHTARLLAELFSRIGTRHM--QTGILIGVQHDGIGGANF 464
Query: 433 SRKKQNEIVEEFRRGLVNVIVATSILEEGLD--VQSCNLVIMFDPSRTVCSFIQSRGRAR 490
S ++Q + +FR+G +N +V + + V+ NL+ S IQ RA
Sbjct: 465 SFRQQFLTLLKFRKGELNCLVRPELDHDSYAHMVERDNLI--------HASCIQEAQRAE 516
Query: 491 MQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVES 550
+M + +S + R+ + M L+ Y + F V S
Sbjct: 517 H------IMRRFCESLPEDRIIRGSSDDLGMN-------------LDKERYYKSFT-VHS 556
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQ 608
TG T SS+ ++ Y S L + P + I + G +C LP P + + +
Sbjct: 557 TGATLTYPSSLVVLAHYASSLQYEKETSPQVNYFIERIDGAFVCEAILPEKSPFRGLTGK 616
Query: 609 GNIKTL--KQAACLEACKKLHQIGALTDNLL 637
+ + L +Q+A E C L + G L D+ +
Sbjct: 617 PSARKLHARQSAAFETCLMLRKNGILDDHFV 647
>gi|402073770|gb|EJT69322.1| dicer-like protein 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1538
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 182/690 (26%), Positives = 295/690 (42%), Gaps = 101/690 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE + +++QN IV ++TGSGKT +A+ LR + L R + FL P V L
Sbjct: 74 RVYQLELFQASMEQNIIVSMDTGSGKTQVAV--LRIISELERTDADKRIWFLAPTVTLCN 131
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ E ++ + V GD VD W + W + + V+V T QIL D L S+
Sbjct: 132 QQFEVLRSQLPSIGVKILTGDDNVDSWSNQSIWDAVLFETRVVVCTYQILFDALSHSFVT 191
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI-KSKVSSSE 199
L+ I +++ DE H+ G + +M +FYH E+G +P I G+TASP+ +S ++S +
Sbjct: 192 LDTISLIVFDEAHNCLGNNSGRRMMMQFYHPRKESG-LPVPHILGLTASPVMRSDITSMD 250
Query: 200 Q--------DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA---------KFKFYKY 242
+H E L N A ++ P + F K
Sbjct: 251 SLEASLDAVCRGPTVHRDELLANVNRPLMAIDAYPRPPDPMTCPTDNMRRLQDAFSQLKI 310
Query: 243 DEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
E P+ ++ + A + R LE + E IR+++ S L E+G W
Sbjct: 311 AEDPYVMHLY-----AQGTDRSKRMLEK--VFENHDTFIRRQIKAFISRSQTILEEMGSW 363
Query: 303 L-------ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSI 355
A+K A S W LD ++K V P +
Sbjct: 364 AADSYMCQAIKRATKSRTRSSYLVGW--LDAEQRYLVKILKG------VRAKPPQPPYPA 415
Query: 356 GDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC 415
+ S K+ L+ L ++G + I+FV+ TA VL SLL E +
Sbjct: 416 FETS---------APKLQALLTVLASHQG--NPVGIVFVKERATAAVLSSLLQEFPMINE 464
Query: 416 TWKTKYIAGNNSG---------IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
+K Y+ G + + K ++ FR G +N++VATS+LEEG+DV
Sbjct: 465 RYKVGYMVGTSRNAARKRDFYDLSPMEDGKGASALDNFRSGRINLLVATSVLEEGIDVPV 524
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG-----------DSTTQSRLENYL 515
CNLV+ FD + SFIQ RGRARM++S L+++ G + + R E+ +
Sbjct: 525 CNLVVCFDRPANLKSFIQRRGRARMRSSQLHLLLEEGERLVAHDWEALEKEMKRRYEDEM 584
Query: 516 ASGNKMRK---EVLSHASL--PCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSR 570
+ +++ E + ++ P +PL T T+ + + +C
Sbjct: 585 RELDHLKQLEDEEAENTTMDGPLAPL----------RARDTAAEITIKDAKGHLDHFCRV 634
Query: 571 LPSDGYFKPTPKFHINKEMGI--CTLYLPNNCPIQTVIAQGNIKTLKQA-----ACLEAC 623
+ S + P+P++ IN+ T+ LP + P++ + + Q A L+A
Sbjct: 635 IGSRMFVDPSPEYLINETSSEIHATVLLPVSLPLKLRRISSSRGWMSQKNACKDAALQAY 694
Query: 624 KKLHQIGALTDNLLP---DIVVEKHDAQKR 650
K L+ G L +LLP ++V D + R
Sbjct: 695 KMLYDAGLLNQHLLPIREEVVAANRDVEGR 724
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 163/349 (46%), Gaps = 50/349 (14%)
Query: 910 QQKQKEPSKISFE-----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-- 962
QQ +P K + +P C + ++++ +PSI + +++ ++A L
Sbjct: 948 QQGSDQPPKDNKRPYPRIVPASDCIVDDDSLTMTMAQFGMLIPSITNAMENYMVAEELLR 1007
Query: 963 KNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNN 1022
L ++V + V+ A++ Q + E +E LGDS LK AS
Sbjct: 1008 TTPLGTLGFKDVAL----VVTALSAPSSQNVTNYERIEFLGDSILKLCASITCAANNLEY 1063
Query: 1023 HEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFN 1082
EG LS+ K+RI+SN+ LC+ + L FI T+ + W
Sbjct: 1064 PEGYLSLVKDRIVSNSRLCRAAVKFGLDRFIITKQHTLRGW------------------- 1104
Query: 1083 GRKIY--VTGRKKVKSKTVADVVEALIGAFLSTGGEN-----VGLIFLDRIGIKVDF-VN 1134
+++ + ++ + +KT+ADVVEALIGA L GG + + L D +D
Sbjct: 1105 -KRVLQAMEAQRDLSTKTLADVVEALIGAALIEGGMDKALRCISLFLPDEEWRSLDLGRQ 1163
Query: 1135 VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR-CYQRLEFLG 1193
+ YQ + + V +R +E LL Y+FR+ +LLVEALTH SY +P C +RLEFLG
Sbjct: 1164 ILYQAAPKSVKKLPVTMRPVEGLLGYTFRNKALLVEALTHSSYSVPGSETGCLERLEFLG 1223
Query: 1194 DAVLDYLITVYLY----------NKYPGLSPGYLTDMRSASVNNDCYAL 1232
D++LD ++ L+ N P L+ + +R+A VN D A
Sbjct: 1224 DSILDSVVVEKLFAIGGGDGDGDNGRPPLAHTDMHLLRTAMVNGDFLAF 1272
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
AE L+ L +L F+D +L+V AL+ S + Y+R+EFLGD++L ++
Sbjct: 1002 AEELLRTTPLGTL---GFKDVALVVTALSAPSS---QNVTNYERIEFLGDSILKLCASIT 1055
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL--YKRINITVDSFE 1262
GYL+ ++ V+N ++VK GL + I+ H L +KR+ +++
Sbjct: 1056 CAANNLEYPEGYLSLVKDRIVSNSRLCRAAVKFGLDRFIITKQHTLRGWKRVLQAMEAQR 1115
Query: 1263 KLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
LS K L D++E+L GA ++ G ++
Sbjct: 1116 DLST-------------KTLADVVEALIGAALIEGGMDK 1141
>gi|302687578|ref|XP_003033469.1| hypothetical protein SCHCODRAFT_37756 [Schizophyllum commune H4-8]
gi|300107163|gb|EFI98566.1| hypothetical protein SCHCODRAFT_37756, partial [Schizophyllum
commune H4-8]
Length = 1343
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 189/720 (26%), Positives = 311/720 (43%), Gaps = 137/720 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ E LE +L +N I+ L+TGSGKT IA++ L+ + + + + ++ F P V L
Sbjct: 1 RSYQQEMLEQSLHRNIIIALDTGSGKTHIAVLRLK---HEMERRTNKISWFFAPTVGLCE 57
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ I+ + VG G + D W D A W + H++++ TPQ+LLD LR Y L
Sbjct: 58 QQRSVIQRSLPVPVGLISGALEPDQWKDAALWMRVLRDHKIMISTPQVLLDALRHGYINL 117
Query: 142 NM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL--------------PRIFGM 186
I +L+ DE HHA H Y +M EFY R L T N+ P + G+
Sbjct: 118 GRDISLLVFDEAHHAVDNHPYNRVMLEFY-RPLATVPVNVESQIAPGKVVPLCRPAVLGL 176
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS----ESVLSNFIPFSTAKFKFYKY 242
TASPI ++E+ + +E+ +++ + CA + +LS+ + +
Sbjct: 177 TASPIFG--GNTEKAF----RTIESNLDATI--CAPVVHRKELLSHVHRPTFKHVMYTPP 228
Query: 243 DEIPHALYTHLAD------------ELAMIELKHTRSLENLDLNEAQAELIRKKVSK-IN 289
E T+LA + A+I L+ + L L + E +++SK I+
Sbjct: 229 GEWDRPFSTNLASLQAVVKSVDINRDPAVISLR--QKLPTLARGTPEYERTDQRLSKAIH 286
Query: 290 STLLYCLSELGVW--LALKAAETISCYESDFFAW------EQLDGFGETII--------- 332
+ + L + A + E I + +D++ W + G +II
Sbjct: 287 KKKTFTHTGLTQFQRAAEEICEDIGGWAADWYVWTVVQEARKAARIGNSIISLSSWGNKE 346
Query: 333 KKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-----YRGVED 387
KK+ D + S A I DDS TEK+ L+ +LL E
Sbjct: 347 KKYLLDILDRVHVNPVSLAPDDILDDS---------TEKVHALVNTLLSEKAEAEAANEA 397
Query: 388 IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK------------ 435
++FVER + L+ELL H ++ GN G + +
Sbjct: 398 FSALVFVERRDSVFA----LAELLKNHPVAGREFSVGNLVGTSESTHRHSFLDITRVLLD 453
Query: 436 -KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
K +E +E+FR G NVIV+TS+ EEG+D+Q+C V+ +DP + S++QSRGRAR + S
Sbjct: 454 QKLDETLEDFRLGTKNVIVSTSVAEEGIDIQACGCVVRWDPPPNMASWVQSRGRARRKRS 513
Query: 495 DYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED---------- 544
++ + +T+ + ++ KE++ + P N G
Sbjct: 514 VFVSLF-----STEGGHRKDVNEWERLEKEMVDRYTDPTRVQYNQDAGWGEDGEDEDEEE 568
Query: 545 -FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF--KP---------TPKFHINKEMGI- 591
Y +TG TL S++ + +C+ +P + +P P +H N + +
Sbjct: 569 LIYTNPTTGAKITLQSALPHLEHFCAMIPFSAHTDNRPIYDVDPPEMPPGWHENTRVEVP 628
Query: 592 -------CTLYLPNNCPIQ----TVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
T+ LP P++ TV + I + A + A LH+ G L D+ LP
Sbjct: 629 LPTGPFGATVTLPRVVPLEVRSFTVPREFSTKISAFRHVAFV-AYTTLHKCGLLNDHFLP 687
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 204/467 (43%), Gaps = 85/467 (18%)
Query: 913 QKEPSKISF--ELPPELCRIIMAPIS-------LSTFYSF-----------TFVPSIMHR 952
Q P++++F LPP R AP S L F S +PS +
Sbjct: 875 QPLPARVNFLAPLPP---RASAAPTSDPRFVYLLPQFASVILQGQQDAEYAALLPSTLRA 931
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAAS 1012
L+ +LK L ++P + A+T QE + + LET+GD+ LKY S
Sbjct: 932 LEVTTTVDSLKEHLFASTPME-SVPQSLMSVAMTAPVSQEPVNYQRLETMGDTVLKYLVS 990
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
QL+ Y HEG L+ +K+ +SN L K+ + + +I E PK +N S
Sbjct: 991 IQLYAEYPLWHEGYLAKQKDHTVSNVRLAKISVRRHIFQWIIREKNKPKKKKKKDNNQLS 1050
Query: 1073 YELNDDSLFNGRKIYVTGRKKV-KSKTVADVVEALIGAFLSTGGENVGLI---FLDRIGI 1128
+ G + +T + K +ADV+E+LIGA GG ++G F D +G+
Sbjct: 1051 TK--------GTVLKITSELLLTKLSVLADVIESLIGAAYVHGGLSLGRACAQFFD-LGL 1101
Query: 1129 KVDFVNVPYQRQFQVHAERLVNV-------RHLESLLNYSFRDPSLLVEALTHGSYMLPE 1181
K D + + R V + +++E +L Y+F +LL+EALTH SY P
Sbjct: 1102 KWDTTSA----RISTILSRTVTLDQYPAELQYVERMLGYTFERKALLIEALTHASYQEPL 1157
Query: 1182 IPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS--SVKHGL 1239
Y RLEFLGDAVLD +T Y++ SPG++ RSA+VN A K +
Sbjct: 1158 PTPSYGRLEFLGDAVLDMAVTPYIFASKKNYSPGHIHLRRSAAVNMHFLAFVCLRAKVAV 1217
Query: 1240 HKH-------------------------ILHASHELYKRINITVDSF--------EKLSL 1266
KH +LH+S + N T F E L
Sbjct: 1218 DKHMPRPTAPDWRVQMATESQDIYLWQCMLHSSSTVIDDQNNTFARFRRLEKEISEALET 1277
Query: 1267 GSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
G F W ++T PK D++ESL GA+F+D+ + E+ IR L
Sbjct: 1278 GDIFPWAALTRMQAPKFFSDVVESLIGAVFLDAEGDMEIATDVIRTL 1324
>gi|154283385|ref|XP_001542488.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410668|gb|EDN06056.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1359
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 216/455 (47%), Gaps = 57/455 (12%)
Query: 886 CFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
C ++P++ + +N L + +Q++ E + ++ + PE RI + +
Sbjct: 820 CDWKQPVVRAELVRLRRNLLDRATEQERGE--ETAYYICPEPLRI--SALPPPVAAFAFA 875
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT------KKCQEDFHL--- 996
P+I+ R++S L+++ + L ++I T LEA+T + +E H
Sbjct: 876 FPAIISRIESYLISLEACDKL------QLSIETHLALEALTKDSDNTEEHRKEQIHFQRG 929
Query: 997 -----ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
E LE LGD FLK A S LF +N E VK+ +I N L KL
Sbjct: 930 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYE 989
Query: 1052 FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK--VKSKTVADVVEALIGA 1109
F+RT+ F + W G L G+ + + K + KT+AD+ EALIGA
Sbjct: 990 FVRTQGFSRRNWYPEGIK----------LLQGKAQPESAQNKQALGDKTIADICEALIGA 1039
Query: 1110 FLSTGGENVGL--------IFLDRIGIKV-------DFVNVPYQRQFQVHAERLVNVRHL 1154
L +GG+ +F+D +V D ++P + Q A +L + +
Sbjct: 1040 SLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLPSYQIAQADAGQLDLAKQI 1099
Query: 1155 ESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ L Y F P LL A TH SY +P CYQRLEFLGD++LD + YLY+ YP
Sbjct: 1100 GNRLGYHFTYPRLLRSAFTHASYPSAWSTVP-CYQRLEFLGDSLLDMVCVEYLYHHYPDR 1158
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE---KLSLGST 1269
P +LT+ + A V+N +VK GLHKH+L+ S+ L+ +I + E S S
Sbjct: 1159 DPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSP 1218
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
W + + PK L D++E+ GAIFVDS + EVV
Sbjct: 1219 DAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1253
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Query: 109 DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEF 168
D TW++ SK+ ++V T ++L L S+ ++ I +LI DE H A+ +H YA I+ +F
Sbjct: 114 DTETWEKHFSKNMIIVCTAEVLCQCLLRSFIRMEQINLLIFDEAHRAKKEHPYARIVKDF 173
Query: 169 YHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN 228
Y R E P+IFGMTASP+ +KV D + +LETL++S++ T ++ L
Sbjct: 174 YLRRPEA--QKRPKIFGMTASPVDAKV-----DVAKAAKNLETLLDSQIATASNLDALRQ 226
Query: 229 FIPFSTAK 236
I T +
Sbjct: 227 AIARPTEQ 234
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 368 LTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG-N 425
L+ K+ L+ L L + D +CI+FV++ TA +L L S + RH +T + G
Sbjct: 325 LSSKVRLLLHELSLYFERHTDTKCIVFVQQRHTARLLAELFSRIGTRHM--QTGILIGVQ 382
Query: 426 NSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLD--VQSCNLVIMFDPSRTVCS 481
+ GI S ++Q + +FR+G +N +V + + V+ NL+ S
Sbjct: 383 HDGIGGANFSFRQQFLTLLKFRKGELNCLVRPELDHDSYAHMVERDNLI--------HAS 434
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
IQ RA +M + ++ + R+ + M L+ Y
Sbjct: 435 CIQEAQRAEH------IMRRFCEALPEDRIIRGSSDDLGMN-------------LDKERY 475
Query: 542 GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--ICTLYLPNN 599
+ F V STG T SS+ ++ Y S L + P + I + G +C LP
Sbjct: 476 HKSFT-VHSTGATLTYPSSLVVLAHYASSLQYEKETSPQVNYFIERIDGAFVCEAILPEK 534
Query: 600 CPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLL 637
P + + + + + L +Q+A E C L + G L D+ +
Sbjct: 535 SPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILDDHFV 574
>gi|332029751|gb|EGI69620.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1257
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 201/432 (46%), Gaps = 80/432 (18%)
Query: 978 TIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISN 1037
+I+++ A+TTK + F+LE LETLGDS+LK+ S L+ + +EG L+ K ++I N
Sbjct: 777 SIEIVHALTTKLGSDMFNLERLETLGDSYLKFIVSLFLYHKFPTFNEGQLTALKGKMIGN 836
Query: 1038 AALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYEL---------------------- 1075
L G ++ +PG I+ ++F P IP S + L
Sbjct: 837 RNLYYCGNKKGIPGRIKNDAFVPMSNFIPPAYSVYHPLQKILMDELVAPNVLYEFLIPNM 896
Query: 1076 -------NDDSLFNGRKIYVTGRKKVK--------------SKTVADVVEALIGAFLSTG 1114
++D+L ++ + K+ K KTVAD VEALIG +L
Sbjct: 897 ERFTGYISEDTLNMMKQTVSSWDKRDKQTGVEHYLGVQILSDKTVADSVEALIGVYLKNN 956
Query: 1115 GENVGLIFLDRIGI----KVDF----------VNVPYQRQFQVHAERLVNVRHLESLLNY 1160
L GI K+D + V + A+ L ES + Y
Sbjct: 957 HIKGAAKLLKWFGILPDVKIDMLLGSISQNPVIGVGDPNYYMPWADTL------ESKIGY 1010
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++A TH SY I CYQRLEFLGDA+LD+LIT Y+Y LSPG LTD+
Sbjct: 1011 KFKNRAFLLQAFTHPSYTANGITECYQRLEFLGDAILDFLITCYIYENDVNLSPGDLTDL 1070
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK------------LSLGS 1268
RSA VNN +A SV+HGLH +L + +L++ I+ V E+ L
Sbjct: 1071 RSALVNNITFACLSVRHGLHTALLAYAPKLHEIIDCFVRFQEERDYVVNDELLYVLIEED 1130
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPV 1326
PK LGD+ ESL GAI++DSG N V++ I + I + P+
Sbjct: 1131 ECNITEYVDVPKVLGDLFESLIGAIYLDSGKNLTKVWEIIYSFMHKEIDEFSRNIPKQPI 1190
Query: 1327 R---ELTEYCQK 1335
R E T+ C K
Sbjct: 1191 RVIYENTDICPK 1202
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 149/648 (22%), Positives = 275/648 (42%), Gaps = 115/648 (17%)
Query: 413 RHCTWKTKYIAG-------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
R+ + Y+ G N + C + K E+++ + G N IVAT +++EG+D+
Sbjct: 95 RYSFLQPDYVIGFQNNPYKNTREVSCIA-KWNKEVLQRLKNGSSNCIVATDVVDEGIDIP 153
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
C L+I +D +++QS+GRAR S YL++V++ D + Y + K+++ +
Sbjct: 154 MCTLIIRYDVPTDFRAYVQSKGRARHNLSSYLILVENDDEDFLKKYHQYKDTEKKLKRIL 213
Query: 526 LSHASLPCSPLNNHMYG--EDF----YHVESTGTIA---TLSSSVSLIYFYCSRLPSDGY 576
+ P ++ + G DF Y V+ + T +++ LI YC+ L + +
Sbjct: 214 VGKNERPLPTQDDIVNGLYSDFDIEPYTVKCDDVVKSRLTEFTAIDLINMYCAALLTSKF 273
Query: 577 FKPTPKFHINKE----MGICTLYLPNNCPIQTVIAQGNIKTL---KQAACLEACKKLHQI 629
P + ++K+ M +L LPN P++ VI ++++ K++ ++ C +LH++
Sbjct: 274 VYLVPIWKLDKDDSKNMYRISLKLPNLSPLKDVIYGDFMRSIDGAKRSVAMKTCIQLHKL 333
Query: 630 GALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITY-HCY-LIELK 687
GALT +P PQ + Y H + L
Sbjct: 334 GALT-----------------------------YPIAFYGAYPQPLRSLYLHVFDCTSLY 364
Query: 688 QHFNYDISARNIVLAMRTELESEI---------KKVNFDLEVERGRLTVNLK-HLGRIQL 737
YD R ++ +S K +F + ++ G L V++K + I L
Sbjct: 365 PVTGYD--NRRVIFYNLLNDKSGFGILSTKRLPKIPSFPIFMKDGELNVDVKSNHATIVL 422
Query: 738 IPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFEL--RDNLEIDYLLLP-STGQLIDWK 794
N + L +RF LF I+ ++ F + DNLE ++++P + Q I+W+
Sbjct: 423 SQNNIELLKRFNFLLFSEII--------PVIKSFMIFDNDNLENSFVIVPLNDKQEINWE 474
Query: 795 TVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHN-GQIYCITGV 853
V T + + F+ R T +LV + +Y +T V
Sbjct: 475 IVETY------QDLERITPNIPFHFR----------TSDYELALVAPNYRYNAVYIVTRV 518
Query: 854 LGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY-----LSKC 908
L S F N TY +Y+E++G+ + ++ +L + I NY LS+
Sbjct: 519 CDDLTPESYFP--NEDFDTYTHYYKEKHGLIIENLQQSMLEVKPIPIKINYIKPRKLSEG 576
Query: 909 RQQKQKEPSKISF---ELPPELCRIIMAPISLSTFY-SFTFVPSIMHRLQSLLLAVNLKN 964
+ +K + L PELC I P S ++ T +PSI+HR+ +L+A +L+
Sbjct: 577 PLKNKKTDDTVEDLQEHLVPELCYKINFP---SVYWLKATTLPSILHRICQILIAEDLRV 633
Query: 965 MLLDHCMQNVTI----PTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
+ I ++K+ E++ ++ E+ + LE DS K
Sbjct: 634 TIARETKLGTLILKESSSLKIEESV--ERSNEEDYTNGLELTDDSIEK 679
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 39 IVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVVLVPQQAEAIKMHTDLK 95
I++L TG+GKT IA+MLL+ + +RKP ++F+V V LV QQ+ IK HTDL+
Sbjct: 2 ILYLPTGAGKTYIAVMLLKHLSRDVRKPYQEGGKRSIFVVNTVALVEQQSTYIKRHTDLR 61
Query: 96 VGKYWGDMGVDFW 108
Y GDM VDFW
Sbjct: 62 CKGYSGDMMVDFW 74
>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1377
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 177/655 (27%), Positives = 293/655 (44%), Gaps = 61/655 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL-LRKPSPFVAVFLVPKVVLV 81
RNYQ E E +L++N IV ++TGSGKT +A LLR L R+P + FL P V L
Sbjct: 17 RNYQTEMFEASLQENIIVAMDTGSGKTHVA--LLRIMNELETRRPQKLIW-FLAPTVALC 73
Query: 82 PQQAEAI-KMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ + I K +K G V+ W + A W + +V+V T +L D + +
Sbjct: 74 FQQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSNGFV 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSNLPRIFGMTASPIKSKVSSS 198
+++ + +LI DE HH +H IM +FYH L++ G +P I G+TASP+ S
Sbjct: 134 RVSQLGLLIFDEAHHCMRRHPANRIMQDFYHPTLVKQGPDAVPGILGLTASPVVRTNS-- 191
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
Q++ +E+ MN+ C + + T + + P + +
Sbjct: 192 -----QELSMIESNMNA---ICKTPRAHRQELLTHTHRPHLQQIWYTPVNIDDPTSGTRT 243
Query: 259 MIELKHTRSLENLDL-NEAQAELIRKKV---SKINSTLL----YCLSELGVWL--ALKAA 308
+ L H + E +DL ++ + +R+ + LL YC L ++ +
Sbjct: 244 LRALIH--AWETIDLEDDPYVKQLRRSTFDGKALQKALLTRKTYCNESLRRFVERSCHIF 301
Query: 309 ETISCYESDFFAWEQLDGFGETI-----IKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
+ + + D+F + E I + + ++ + L +++ + A +I D
Sbjct: 302 QELGGWAVDYFIHASIRRLREKIDDSALMLDWDNEEKEYLASFLSNIA--TIQSDPPRRP 359
Query: 364 DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLPR---HCTWKT 419
+ + + K+ LI S L +IF ++ T VL +LLS L + C
Sbjct: 360 EDFIPSPKLEALI-SFLSSTDDSTFSGLIFAKQRATVTVLATLLSVHPLTKDRFRCAAFV 418
Query: 420 KYIAGNNSGI---QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G N + S + Q + + EFR G N+IVAT +LEEG+D+ +C++VI +D
Sbjct: 419 GWSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKP 478
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPL 536
V SF+Q RGRAR + S + ++ + D R L M + C L
Sbjct: 479 ANVKSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEA--MIEAYQDDERKRCEAL 536
Query: 537 NNHMYGE---DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI-----NKE 588
E + + VESTG + T ++V+ ++ +CS LP Y P+ +
Sbjct: 537 ALETMAEVVTERFEVESTGAVLTADTAVARLHHFCSILPQQPYVDNRPELSFEYDGTGRR 596
Query: 589 MGICTLYLPNNCPIQTVIAQG-NIKTLKQAACLEA----CKKLHQIGALTDNLLP 638
G T LP+ +G T ++AA EA CK+L++ G L D+LLP
Sbjct: 597 RG--TFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGLLNDHLLP 649
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 211/493 (42%), Gaps = 74/493 (15%)
Query: 916 PSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 975
P+K +P C I P + + F F+ +I+ RL++ L+A L +L Q+V
Sbjct: 876 PAKARI-IPATACTIDRLPFTDTIFG--LFISAILDRLEATLIATRLCETIL----QDVQ 928
Query: 976 IPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERI 1034
+ + V+ AI+ Q + E GDS LK+ S QL+ + N EG LS ++ I
Sbjct: 929 FSSTRHVITAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEI 988
Query: 1035 ISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKV 1094
+ N L + + L FI T F P+ W P L + + + V G++ +
Sbjct: 989 VQNNRLARAALDVGLDAFILTRRFTPRKWTAP-------------LISEKAVEVAGKRPL 1035
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF--VNVPYQRQFQVHAERLVNVR 1152
SK +ADVVE+LIGA GG+ + R+ +++ + P + H V
Sbjct: 1036 SSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPITPPPVHESAPH----VMND 1091
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
L+ L Y+F + +LLVEALTH S + YQRLEFLGDAVLD ++ + +
Sbjct: 1092 SLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVHAMAHHAVEC 1151
Query: 1213 SPGYLTDMRSASVNNDC-------------------------YALSSVKHGLHKHILHAS 1247
G +T ++ A N + +AL S + + S
Sbjct: 1152 PQGEMTMIKHALTNANLLAFFCMEFVVAQEHTDVDAVPAAGGFALRSEQKPIELWRFMRS 1211
Query: 1248 HE----------LYKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFV 1295
L++ + + L G+ + W++++ K DI+ES+ GAIFV
Sbjct: 1212 EALDLNNARETVLHRHSQLRAEIVHALHHGAQYPWQALSQLNADKFFSDIVESILGAIFV 1271
Query: 1296 DSGCNREVVFQSIR-----PLLEPMITPETMRFHPVRELTEYCQKNH--FSMKKPVASRI 1348
DS + +V + P L ++ HP R + K F+ K+ V
Sbjct: 1272 DSRGDLDVCAMFVERIGLLPYLRRILADRVDVMHP-RHTAQRLSKGEALFTAKRVVDG-- 1328
Query: 1349 SGKAAVTVEVQAN 1361
SG A+ V+ N
Sbjct: 1329 SGNASYRCVVKRN 1341
>gi|307109321|gb|EFN57559.1| hypothetical protein CHLNCDRAFT_143199 [Chlorella variabilis]
Length = 2232
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 161/596 (27%), Positives = 254/596 (42%), Gaps = 157/596 (26%)
Query: 869 SVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE------ 922
++ +Y +Y ER+G + + +PLL R+ Q ++ +K + E
Sbjct: 1644 ALVSYAAYYAERWGQRELDEGQPLLAAARVSRQQLARGLDMRRARKRGCALQLEAEEEVR 1703
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL 982
L P+LC I+ P+ + + +P++M +L+ LLA L +L + P +++L
Sbjct: 1704 LLPQLC--IVHPVPAALWRPLGTLPALMWQLEGALLADQLLEQMLPADLPPEKAPPLELL 1761
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISN----A 1038
TT+ LETLGD+FLK+A S QLF ++ HEG L+ +KE +++N
Sbjct: 1762 R--TTR----------LETLGDAFLKFAVSAQLFSAHRQYHEGQLTKRKELVVANIHLAE 1809
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
A KLG +++L R F W P S SK
Sbjct: 1810 AAVKLGLDRRL----RVLPFSMHNWASPEAVRKS-----------------------SKV 1842
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV--------------DFVNVPYQRQF--- 1141
+AD +EAL+GAFL GG L FL + + PY +
Sbjct: 1843 LADAMEALLGAFLVAGGYPAALAFLQASAGRRGRRLRLPRAAAPGWGLCSQPYSQHLGLL 1902
Query: 1142 ----QVHAERLV---------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
+ AE + +V +E++L ++F L+VEALTH S+ + RC+QR
Sbjct: 1903 KGWVPISAEACIPPESPELECDVGAIEAVLGHTFASKWLVVEALTHCSWPGSGV-RCFQR 1961
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGDAVLD L + DMRS +VN A + K L
Sbjct: 1962 LEFLGDAVLDAL----------------MHDMRSVAVNASRLAYAG------KPGLDFVE 1999
Query: 1249 ELYKRINITVDSFEKLSLGST----------------------------------FGWES 1274
E R+ +++ E+ + ++ FG+++
Sbjct: 2000 EWRDRLREALEAQEQQACPASPAGGTAGAAAGDADAAASKEALRAAELSVMTQFAFGFQT 2059
Query: 1275 VTSFPKALG-----------------DIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
+ + PKA G D++ESL GA+FVD+G + V++ + LL+PM+
Sbjct: 2060 IQA-PKASGRDQPPSPALHCLQTVLSDVVESLIGAVFVDTGGDMGRVWEVTQRLLDPMVV 2118
Query: 1318 PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAA-VTVEVQANGRLFEHTFLDA 1372
PET+ HP+R L E Q+ + K A R G A V V+V A G + + + A
Sbjct: 2119 PETLPVHPIRRLQELVQRCGVNPKYEEAGREQGGAGRVHVKVSAQGVVLGESVMQA 2174
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 168/385 (43%), Gaps = 96/385 (24%)
Query: 367 LLTEKIVCLIESLLEYRGVEDIR------C-IIFVERVITAIVLQSLLSELLPRHCTWKT 419
L++ K+ L L+ YRG C I+FV + + A L +LS L ++T
Sbjct: 786 LVSPKMAALAGQLMRYRGAAAALAPGPGWCGIVFVTQRMAAWALHKMLSTLPATRGVFRT 845
Query: 420 KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
I G ++Q+ I+ FR G +N++V+TS+ EEG+DV+SC LV+ +D
Sbjct: 846 SAIMGLGP-------REQSRILRRFRAGELNLLVSTSVAEEGIDVKSCQLVVRYDLPNNA 898
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVL------------- 526
S+IQSRGRARM NS+ L+MV+ G + + + +++R+EVL
Sbjct: 899 QSYIQSRGRARMINSELLMMVQEGVEEEHRMVRHMVEYEHQLRQEVLLNIERLQAGAIDD 958
Query: 527 -SHASLPCSPLNNHMYGEDFYHVESTGTIATLSSS------------------------- 560
+ + + L + Y VESTG ATL ++
Sbjct: 959 DADVAAEAAELQAALAHAPVYEVESTGARATLENAQARPHTCAQAASRPAQRRCSCCRTA 1018
Query: 561 -----VSLIYFYCSRLPSDGYFKPTPKF---HINKEMGICTLYLPNNCPIQTVIAQGNIK 612
++L++ Y S+LPSD Y P F +++ + ++LPNN P+ A G
Sbjct: 1019 VQEGPLALLHTYTSKLPSDQYTVLRPLFRTEQLDQRVFRTRVFLPNNSPLP--WADG--- 1073
Query: 613 TLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP----------IY 662
+GAL D LLP ++ E A++ + P A+ P +
Sbjct: 1074 ----------------LGALNDFLLPAVLDE---AKRAAHTPRAAKGPREGQAAGHKRLA 1114
Query: 663 FPPELVNQSPQDTKITYHCYLIELK 687
P L QD + T HCY E +
Sbjct: 1115 EPGSLRGLLAQD-RATLHCYRWEAR 1138
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDL-KVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VA+FL PKV LV QQAE ++ H +V + G+MGVD ++ W + H+VL MTPQ
Sbjct: 168 VAIFLAPKVALVVQQAEVLRAHLGADQVAHFVGEMGVDLFEKERWHAAFADHDVLAMTPQ 227
Query: 129 ILLDGLRLSYFKLNM 143
ILL+ L K ++
Sbjct: 228 ILLNLLSHGIIKASL 242
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+++ + +L+ DECHH + KH + IM +FYH E + P +FGMTA+P ++
Sbjct: 303 QMSQVHLLVFDECHHCKSKHPFNRIMQQFYHS-HEALLAPRPHVFGMTAAPANVGRRETQ 361
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
+D KI LE ++++V T + + + T + Y+
Sbjct: 362 EDMEAKIRVLEANLDARVVTVVNRASVEEVARPPTLRVAAYR 403
Score = 47.4 bits (111), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR 57
AR YQLE LE A K+N I FL+TG+GKT ++++L+R
Sbjct: 44 ARIYQLELLELAKKRNVIAFLDTGAGKTFVSVLLIR 79
>gi|158706446|sp|Q4WA22.2|DCL2_ASPFU RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1388
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 180/687 (26%), Positives = 314/687 (45%), Gaps = 97/687 (14%)
Query: 10 TTEEVSADTLPF-ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP 68
+T D P+ RNYQLE LE ++K+N IV ++TGSGKT IA++ +++ L SP
Sbjct: 3 STVSTCQDASPYQPRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKAE---LDICSP 59
Query: 69 -FVAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVM 125
V FL P V L QQ E I + ++ G V+ W D + W ++ + V+V
Sbjct: 60 DKVVWFLAPTVALCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVS 119
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSNLPRIF 184
T +L D L + K++ + +LI DE HH +H IM +FYH L ++G + +PRI
Sbjct: 120 THAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTKSGPAAVPRIM 179
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE 244
G+TASP+ V S+ Q+ +L+ + C + + + KF
Sbjct: 180 GLTASPV---VRSNHQELLMVESNLDAV-------CRTPRLHRQEL------LKFTHRPH 223
Query: 245 IPHALYTHL------ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL----- 293
+ YT + L + L H + ENLD+ + + R + S ++ L
Sbjct: 224 LQQIWYTPTDPAGFRSASLTLGALYH--AWENLDIGD-DPYIQRLRKSPLDDRALKKALL 280
Query: 294 ----YCLSELGVWL--ALKAAETISCYESDFFAWEQLDGFGETIIKKFGS-DASQALVTY 346
YC +L ++ + E + + ++++ + + + + + S D +A Y
Sbjct: 281 TGKTYCREQLRRFVDRSRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMSGDWDEAEKAY 340
Query: 347 -------VP-SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIR---CIIFVE 395
+P S +++ D F +I ESLL + D R +IFV+
Sbjct: 341 LVDFLSKIPTSDIHFALNDPDGF---------RISPKFESLLNFLDSSDQREFSGLIFVK 391
Query: 396 RVITAIVLQSLLS-ELLPRHCTWKTKYIAGNNSGIQCQ------SRKKQNEIVEEFRRGL 448
+ +T + SLLS R Y+ +NS + + Q + +++FR G
Sbjct: 392 QRVTVSAMTSLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGR 451
Query: 449 VNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT- 507
N+I+AT +LEEG+D+ +C++V+ +D + SFIQ RGRAR + S + +M + D++
Sbjct: 452 KNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSAD 511
Query: 508 --------QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
Q+ +E Y ++ + V + SL + + G +ST + T
Sbjct: 512 VSRWQDLEQAMIEAYQDDERQL-QSVSALESLD-EEVMERLTG------DSTSAVLTADM 563
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHI-NKEMGIC--TLYLPNNCPIQTVIAQGN--IKTL 614
+++ ++ +C+ LP Y P F E G+ T+ LP+ + +G +T
Sbjct: 564 AMAHLHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTE 623
Query: 615 KQA---ACLEACKKLHQIGALTDNLLP 638
+ A +A K L++ G + D+LLP
Sbjct: 624 RAAMKETAFQAYKSLYEFGLVNDHLLP 650
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 189/418 (45%), Gaps = 65/418 (15%)
Query: 926 ELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTIKVLEA 984
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 888 EACTIDRLPFTMAIFG--LFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 941
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
I+T + + E LGDS LK++ S QLF + N HEG LS ++ I+ N L K
Sbjct: 942 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 1001
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
+ L +I T+ + W P L + + V ++++ +K +ADVVE
Sbjct: 1002 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLGRVPAKRQMSTKVLADVVE 1048
Query: 1105 ALIGAFLSTGGENVGLI----FLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNY 1160
ALIGA GG + FL I + + A ++N R L+ + Y
Sbjct: 1049 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDR-LKDHIGY 1107
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
+F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N G +T +
Sbjct: 1108 TFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKI 1167
Query: 1221 RSASVN------------------------NDCYALSSVKHGLH------------KHIL 1244
+ A VN D +A++S + + K
Sbjct: 1168 KHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAAR 1227
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
AS ++ + + S L + W +++ K DIIES+ GAIFVDSG N
Sbjct: 1228 DASLARHRALRDEIAS--SLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGN 1283
>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1561
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 215/466 (46%), Gaps = 80/466 (17%)
Query: 927 LCRIIMAPISLSTF------YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTI 979
+C +I+ P+ +ST +F F P+I+HR+ S+++A LD C N+TI
Sbjct: 1022 ICYVILQPLRVSTLPIETVVLAFAF-PAIIHRMDSVMIA-------LDACKHLNLTIRPD 1073
Query: 980 KVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
LEA+T D H E LE LGD FLK A + +F + ++ E
Sbjct: 1074 LALEAMTKDSDNNDEHDQEKINFQSGMGKNYERLEFLGDCFLKMATTIAIFTSKPDDDEF 1133
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRK 1085
V++ +I N L ++ L ++R++SFD + W G L G++
Sbjct: 1134 QYHVQRMLLICNQNLFNKAVDRGLQEYVRSQSFDRRSWYPQGLK----------LMRGKQ 1183
Query: 1086 IYVTGRKKVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKV-----------DFV 1133
+ + K++ADV EALIGA +LS + + + + V D+V
Sbjct: 1184 GQPANKHALADKSIADVCEALIGAAYLSYADSDNYDMAIRAVTAMVKEKTHRMTSWGDYV 1243
Query: 1134 NVPYQRQFQVHAERLVN---VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---- 1186
++Q + + +E + Y F+ P+LL A H SY PR Y
Sbjct: 1244 AGYRHPEWQFRKPTPIQRDMAQQVEESMGYKFKSPALLRSAFHHPSY-----PRAYESLP 1298
Query: 1187 --QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
QRLEFLGDA+LD + +L+NK+P P +LT+ + A V+N A SVK GLHKHIL
Sbjct: 1299 DYQRLEFLGDALLDMVCVDFLFNKFPNADPQWLTEHKMAMVSNQFLASLSVKLGLHKHIL 1358
Query: 1245 HAS-------HELYKRINITVDSFEKLSLGSTFG---WESVTSFPKALGDIIESLAGAIF 1294
+ E +N+ + E + F W +V PK L D++E+ GA+F
Sbjct: 1359 VGTSAMLSQKEEYVSSLNLAMAEAESGAESGMFSQDYWINVKHSPKYLSDVLEAYVGAVF 1418
Query: 1295 VDSGCN----REVVFQSIRPLLEPMITPETM-RFHPVRELTEYCQK 1335
VDSG + R+ + IRP M ++ + HPV L+ +K
Sbjct: 1419 VDSGYDYNEVRKFFDKHIRPFFTDMSLYDSFAKKHPVTRLSHLMEK 1464
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---------KPSPFVAVF 73
R YQ+E E A +N I L+TGSGKTLIA +LL+ ++L+ KP +A F
Sbjct: 139 REYQIELFERAKMRNIIAVLDTGSGKTLIAALLLQ---HVLQNEVEDRAAGKPRR-IAFF 194
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
LV KV LV QQ ++ + V ++ GDM W W ++ +++V+V T IL
Sbjct: 195 LVDKVSLVFQQHAVLECNLGHSVARFCGDMLDSMWSHEFWAQQFEENKVVVCTAAILQKC 254
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L SY +++ I +LI DE HH + H YA I+ ++Y + E P+IFGMTASP+ +
Sbjct: 255 LAHSYIRMDQINLLIFDEAHHTKKDHPYARIIKDYY--IKEPDMEKRPKIFGMTASPVDA 312
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESV 225
+ D LE L++S++ T +S
Sbjct: 313 QT-----DVKIAAARLEGLLHSEIATIPEDST 339
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 368 LTEKIVCLIESL-LEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN- 425
L+ K++ L E L + D +CI+FV+ +TA++L L + + +++ G+
Sbjct: 458 LSTKVLRLWEELQARFSKPTDHKCIVFVDMRLTALLLTDLFRQEATKLPFLNAEFLIGSR 517
Query: 426 -NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
+SG S K+Q + +FR G VN + AT + EEG+D+ C++VI FD R+ +IQ
Sbjct: 518 PDSGAANMSFKEQVLTISKFRHGKVNCLFATQVAEEGIDIPDCSIVIRFDLYRSAIQYIQ 577
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED 544
S+GRAR S+YL ++ G+ + MR+ + P + + G D
Sbjct: 578 SKGRARRAESEYLTFIEGGNGRHTRTVAQAQCDQVTMRRFCTA------LPEDKKISGVD 631
Query: 545 F-------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG- 590
Y + STG T SS+ ++ + S L P++ + E
Sbjct: 632 MTALFLHGEAQKKTYVIASTGATLTWMSSLEVLSNFTSSLRQSNDEVLAPEYVVVNEGQK 691
Query: 591 -ICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTDNLLPDIV 641
+ + LP PIQT+ GN + KQ +A E CK+L + + D L P V
Sbjct: 692 FLAEVQLPPRSPIQTMA--GNPHSTKQDARCSAAFEMCKELIKKKYIDDRLRPVFV 745
>gi|322707759|gb|EFY99337.1| Dicer-like protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 1442
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 182/684 (26%), Positives = 306/684 (44%), Gaps = 88/684 (12%)
Query: 4 VSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL 63
++ +++T+ SA + R YQLE L+ +LKQN IV ++TGSGKT +A+ LR A L
Sbjct: 67 IACDNETSGTPSATAMS-PRAYQLEMLDQSLKQNAIVVMDTGSGKTQVAV--LRIKAELD 123
Query: 64 RKPSPFVAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
R + FL P V L QQ + I++ + + G+ VD W TW + V
Sbjct: 124 RSAPDKIIWFLAPTVALCGQQFDVIRLQAASVAMKLLTGNDQVDTWSADTWDTILDGVRV 183
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
+V T Q+LLD L ++ ++ ++I DE GKH + IMT+FYH S +P
Sbjct: 184 VVSTYQVLLDALCHAFISIDRFSLIIFDE-----GKHPGSKIMTDFYHHNKHAAKS-IPN 237
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK- 241
I G+TA+P S ++ + + LE ++++K C S + + + + Y
Sbjct: 238 ILGITATP-------SMKEDLENMEILEAVLDAK---CISPTRHREELLKCVKRPQIYSI 287
Query: 242 -YDEIPHALYTHLADEL--AMIELKHTRSLENLDLNEAQAELIRKK-VSKINSTLLYCLS 297
YD YT L ++L + L L E ++ R+ V + + +
Sbjct: 288 VYDAPRSLQYTESMYRLRKEFLDLDIRKDPYILRLQEDPSDRNRRALVRAVEKYDTFVQN 347
Query: 298 EL-GVW-LALKAAETISCYESDFFAWEQLDGFGETI------------IKKFGSDASQAL 343
++ G+W + + + + + +D + W+ F I KK+ +D + +
Sbjct: 348 QIKGLWGRSAEILQQLGTWAADMYIWKSSAAFLARINTDAIFNDWIDAEKKYLADFIRRV 407
Query: 344 VTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVL 403
P+ S + ++EK L+ L+ E C+IFV+ TA L
Sbjct: 408 SPSCPASMPQSGSE----------VSEKATALVRELVSVE--ESTVCLIFVKERATAGAL 455
Query: 404 QSLLSELLPRHCTWKTKYIAGNNSGI-QCQSRK-----------KQNEIVEEFRRGLVNV 451
+ L PR K+ G+ G QSRK ++ FR G +N+
Sbjct: 456 REFLVS-CPRIV---EKHRIGSMVGTSNYQSRKLALYELVGQSSDPMAALQSFRSGKINI 511
Query: 452 IVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---Q 508
++ATS+LEEG+DV +CN+VI FD +T SF+Q RGRARM+ S +L+ + S +
Sbjct: 512 LIATSVLEEGIDVPACNMVICFDHPQTPKSFLQRRGRARMKESKLILLSEHSSSAVAKWE 571
Query: 509 SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYC 568
+ EN A ++E+ + S+ N+ F VESTG ++ S + +C
Sbjct: 572 ALEENMKAVYQDTQREIRAIQSM----ENSEESSSTFMEVESTGARLDFENAKSHLEHFC 627
Query: 569 SRLPSDGYFKPTPKFHI---------NKEMGICTLYLPNNCP-----IQTVIAQGNIKTL 614
L + P + I +K T+ LP+ P I + + + K
Sbjct: 628 RVLSQGEFVDSRPDYIIHSHEDCDSSSKPRLSATVLLPSFVPSQLRQIDSKFSWRSEKNA 687
Query: 615 KQAACLEACKKLHQIGALTDNLLP 638
+ A +A + L++ G + +LLP
Sbjct: 688 TKDAAFQAYQTLYEAGLVNKHLLP 711
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 214/489 (43%), Gaps = 56/489 (11%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PS+MH L+ L+A L +L+ N+T + V EAI+++ E + E LE LGD
Sbjct: 958 LIPSLMHELEVTLIAKELSTTILERI--NITDLRL-VREAISSRSAAEPVNYERLEFLGD 1014
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
S LKY + Q+ + EG LS K+R++SN+ L + + L FI T++F + W
Sbjct: 1015 SILKYCTAIQVSAIHPEWPEGYLSFFKDRLVSNSRLSRAAIDVGLAKFILTKTFTGQKW- 1073
Query: 1065 IPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLD 1124
Y N + G V+ RK + +KT+ADVVEALIGA GG L +
Sbjct: 1074 -----RPLYLEN----YTGNPGKVSPRK-LSTKTLADVVEALIGASYVNGGITKALSCIS 1123
Query: 1125 RIGIKVDFVNVPYQRQFQVHAER-----LVNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
++ + +V R R ++ LE L+ Y F SLL+EA+TH S M
Sbjct: 1124 LFVNEIQWQDVSANRALFFKMARDQDKLPAELKPLEHLVGYQFNKKSLLIEAMTHQSCMF 1183
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
R Y+ LEF+GDA+LD++I +Y P L+P + +++A VN D A S+ H +
Sbjct: 1184 DYQRRSYEHLEFIGDAILDFIIVRKMYTAEPLLAPHQMHSLKTAMVNADFLAFLSLDHQM 1243
Query: 1240 HK-----------------------HILHASHELYKRINITVDSFEK--------LSLGS 1268
+ + H+S + T+ +E L GS
Sbjct: 1244 RRTETAVTSDLQIVDKETTPLALWTFMRHSSEAIGIEQATTLKRYEALRGEILATLRQGS 1303
Query: 1269 TFGWESVTSF--PKALGDIIESLAGAIFVDSGCNR--EVVFQ--SIRPLLEPMITPETMR 1322
+ W + K DI ESL GA++VDSG E + Q + +L+ ++
Sbjct: 1304 HYPWALLAGLQAKKFYSDIFESLLGAVWVDSGSIELCECMLQKFGVLSILDRLLKDRVQV 1363
Query: 1323 FHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
HP L + + V G A T V R+ K+ K A
Sbjct: 1364 QHPKEVLGKMAVTQTVTYNVDVQEAPDGDRAFTCRVLVGQRVITEVVDGVTKEEVKTKAA 1423
Query: 1383 KEVLKSLRA 1391
+ ++ + A
Sbjct: 1424 EAAIRIMSA 1432
>gi|442570278|sp|Q1DW80.3|DCL2_COCIM RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|392868830|gb|EAS34630.2| dicer-like protein 2 [Coccidioides immitis RS]
Length = 1435
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 192/696 (27%), Positives = 301/696 (43%), Gaps = 109/696 (15%)
Query: 5 SMESDTTEEVSADTLP--FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
S+ D T + LP AR YQLE L +L+QN IV ++TGSGKT IAI LR L
Sbjct: 28 SILEDGTSKSQEALLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAI--LRIQREL 85
Query: 63 LRKPSPFVAVFLVPKVVLVPQQAEAI-KMHTDLKVGKYWGDMGVDFWD-GATWKEEMSKH 120
R P+ F+ P V LV QQ AI K + G V W W + +
Sbjct: 86 ERCPAHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVSHWSTKKIWDDILLNI 145
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSN 179
+++ TPQ+LLD L + L+ I +L+ DE HH IM +FYH E G
Sbjct: 146 RIVISTPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDG 205
Query: 180 LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESV----LSNFIPFSTA 235
LP I G+TASP + DLE L + C + + + F+
Sbjct: 206 LPHILGLTASPTTRARQT----------DLEVLEINLNAVCVTPKMHREEMMQFVHMPEY 255
Query: 236 KFKFYKYDEIPHALYTHLADELAMI--EL--------KHTRSLENLDLNEAQAELIRKKV 285
+ Y+ D ++ + ++L++I EL K R +L + + + K
Sbjct: 256 RSIEYQPDV---QNFSSIVEKLSVIINELDIENDPFVKFMRRRNDLKSRQRLLDALENKK 312
Query: 286 SKINSTLLYCL-------SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSD 338
+ L CL ELG W S+ F + G +K ++
Sbjct: 313 TPCLDQLKRCLRRSRVIHRELGPW------------ASERFLTRCIMG-----LKSKQTN 355
Query: 339 ASQALVTYVPSGAEWSIGDDS-KFNLDSGLLT----------EKIVCLIESLLEYRGVED 387
AS P A+W D+S N+ S +++ +++ + L+++ +E
Sbjct: 356 ASG------PQWADWDREDNSYMLNVLSQVVSSTEMGVQNPPDELSRKVHKLIDFLVLEH 409
Query: 388 IRCII---FVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK-------- 436
+ I F E I+L LLS L PR KT G+++ + SRK
Sbjct: 410 VNGSIGIVFAEERTIVIMLAQLLS-LHPRTKHIKTTAFLGSSASV---SRKSDITELHNP 465
Query: 437 --QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
Q+ +++ R G ++I+AT++LEEG+DV C+LVI FD + + SFIQ RGRAR + S
Sbjct: 466 IDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRGRARKKGS 525
Query: 495 DYLLMVKSGDSTTQSRL---ENYLASGNKMRKEVLSHASLPCSPLNN-HMYGEDFYHVES 550
+ L + S D T S L E + K L H L N G D + V S
Sbjct: 526 KFALFLHSEDRATSSELHLMEKTMKQLYLENKRALEHIQY----LENVEEEGYDGFRVAS 581
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--------NKEMGICTLYLPNNCPI 602
TG + TLS++ + + +C L ++ + P+F + + ++ + + P
Sbjct: 582 TGALLTLSNARNHLSHFCGTLSAE-FIATDPEFVLEGDDTTGFSAKVILPSFLDPKLREF 640
Query: 603 QTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ ++ K K+ A +A L++ G + D L+P
Sbjct: 641 RGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 203/468 (43%), Gaps = 80/468 (17%)
Query: 884 QLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE-------LPPELCRIIMAPI 935
Q+ +DRE P + GR ++L + EPS S P C + P+
Sbjct: 881 QVTYDREVPHIEGRVWPKRTDFLHRL------EPSNTSKAHHTAKCFYPANNCSVDRLPV 934
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDF 994
S F F+P ++H +++ +A L +L N+++ VL AI++ +E
Sbjct: 935 EYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VLTAISSSAAREAS 988
Query: 995 HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
+ + LE LGDS LK S QL + EG L+++K I+SN L + L FI
Sbjct: 989 NYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFIL 1048
Query: 1055 TESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTG 1114
T+ F W SY N D + G T +++ +K +ADVVEALIGA G
Sbjct: 1049 TKPFTGAKW------RPSY--NTDHINTGDMTEPT--REMSTKVLADVVEALIGAANIDG 1098
Query: 1115 GENVGL----IFLDRIGIKV--DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLL 1168
GEN L IF+ I + VN+ + ++ E + +E L+ Y+F+ LL
Sbjct: 1099 GENKILNCLKIFIPDIKWSPLNECVNILHHQEDSFSDENNNMLSEIEGLVGYTFKKKPLL 1158
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
+ A+TH S YQRLEF+GD++LD ++ L+ + MR+A VN D
Sbjct: 1159 LAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRCFHHFDMHLMRTALVNAD 1216
Query: 1229 ----------------------------------CYALSSVKHGLHKHILHASHEL---Y 1251
Y +KH I++A Y
Sbjct: 1217 FLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQY 1276
Query: 1252 KRINITVDSFEKLSLGSTFGWESVTSFPKA--LGDIIESLAGAIFVDS 1297
++++ +D EKL T+ W + A DI+ES+ GAIF+DS
Sbjct: 1277 EKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILT 1049
Query: 1246 ASHELYK-RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
K R + D + S K L D++E+L GA +D G N+
Sbjct: 1050 KPFTGAKWRPSYNTDHINTGDMTEPTREMST----KVLADVVEALIGAANIDGGENK 1102
>gi|307169911|gb|EFN62420.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 506
Score = 169 bits (429), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 211/456 (46%), Gaps = 98/456 (21%)
Query: 955 SLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQ 1014
SL + V+ N+ H ++++ A+TTK + F LE LETLGDS+LK+ S
Sbjct: 9 SLDILVSTDNLFFSHGPN-----AVEIMHALTTKLGNDMFDLERLETLGDSYLKFITSLF 63
Query: 1015 LFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM-WIIPG------ 1067
L+ + +EG L+ K +II N L G ++ +PG I+ ++F P +I P
Sbjct: 64 LYHKFPAFNEGQLTALKGKIIGNRNLYYCGNKKNIPGRIKNDAFIPTSNFIAPAYTVLRP 123
Query: 1068 ------DNSGS----YEL------------NDDSLFNGRKIYVT--------------GR 1091
D S + YEL ++D+ ++I + G
Sbjct: 124 LQKILLDESVAPNVLYELRIPEEEKFTGYISEDTKMTMQQIVMNWDKEDTKTGYEHYLGV 183
Query: 1092 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI----KVDFVNVPYQRQFQVHAER 1147
+ + KT+AD VEALIG +L + G L GI ++D + + +
Sbjct: 184 QILSDKTIADSVEALIGVYLKSNGIKGAAKLLKWFGILPNIQID------ELLYSNPPDP 237
Query: 1148 LVN----------VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
L+N +E+ + Y F + + L++A TH SY I CYQRLEFLGDA+L
Sbjct: 238 LINPGNPNSYMPWANDMETKIGYKFNNRAFLLQAFTHPSYTPNVITECYQRLEFLGDAIL 297
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
D+LIT Y+Y LSPG+LTD+RSA VNN +A +V++GL +L + +L++ I
Sbjct: 298 DFLITCYIYETCGNLSPGHLTDLRSALVNNITFACLAVRYGLDTALLSYAPKLHEAI--- 354
Query: 1258 VDSFEKLSLGSTF----------------GWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
D F K + PK LGD+ ESL GAI++DSG N
Sbjct: 355 -DRFVKFQQERNYVVNDELLWVLLEEEECNLAEYVDVPKVLGDLFESLIGAIYLDSGKNL 413
Query: 1302 EVVFQSIRPLLEPMI------TPETMRFHPVRELTE 1331
V++ + I TP+ HPVR + E
Sbjct: 414 TKVWEIVYSFTHKEIDKFSKNTPK----HPVRLIYE 445
>gi|327349134|gb|EGE77991.1| dicer [Ajellomyces dermatitidis ATCC 18188]
Length = 1482
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 174/676 (25%), Positives = 303/676 (44%), Gaps = 99/676 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +L++N I+ ++TGSGKT +AI+ +R L + + FL P V L
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIRHE--LETCAAHKLVWFLAPTVALAD 105
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ ++I + + G V++W W + + ++V TPQ+LLD + +
Sbjct: 106 QQHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDILLNIRIVVSTPQVLLDAMTHGFMT 165
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-TGDSN-LPRIFGMTASPIKSKVSSS 198
++ I +L+ DE HH +M FYH L+ TG +N LP I G+TASPI +KV
Sbjct: 166 MSRIALLVFDEAHHCAENEAPNILMQRFYHEQLQRTGTANDLPHILGLTASPI-TKV--- 221
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+ Y KI E +NS+ C + + + + +Y P + +++
Sbjct: 222 DPKYLMKI---EHNLNSR---CETPRI---------HREELMRYVHRPELCTVNFQVDVS 266
Query: 259 ----MIELKHTRSLENLDLNEAQ--AELIRKKVSKINSTLLYCLSE---LGVWLALKAAE 309
+++ H R +E +D+ + L ++K + +TLL + + + K
Sbjct: 267 VGSDILQSLH-RIVETVDIEQDPWIKRLKQQKDRRSQNTLLNAMVKRKTFAISQMTKLRR 325
Query: 310 TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV---------------------P 348
+ + AW D F ++K+ G+ ++ ++ P
Sbjct: 326 QATNIHENLGAWAA-DAFISEVLKRLGAKRAKQSADHLGTLEREQENFVFETLSQLPIYP 384
Query: 349 SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
S W D L++ K LI+ LLE D IIF ++ T +L L+S
Sbjct: 385 SKQYWDSEPD--------LVSSKANLLID-LLEKEHTSDFTGIIFAQQRSTVTMLAHLIS 435
Query: 409 E-------LLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
+ ++P Y ++ + + K Q +++ R G N++VATS+LEEG
Sbjct: 436 KHPRLKDLIVPGAFLGDAGYADRTSTITELHNTKTQRGSIDDLRSGKKNLLVATSVLEEG 495
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+DV +C+LV+ FD + SFIQ RGRAR + S +++ + +GD +Q + NKM
Sbjct: 496 IDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFVIFL-NGDDKSQEK------KWNKM 548
Query: 522 RKEVLSHASLPCSPLNNHMYGED-----------FYHVESTGTIATLSSSVSLIYFYCSR 570
+ S L N E+ + +E TG + T ++ + +C+
Sbjct: 549 EDVMKSMYEEDMRRLENIWAIENIEEEADEKENEYLRIEPTGALLTFENARPHLEHFCAT 608
Query: 571 LPSD-GYFKPTPKFHINKEMGICT--LYLPNNCPIQTVIAQGNI-----KTLKQAACLEA 622
L D +P + ++ G+ T + LPN + + +G+ + ++ A +A
Sbjct: 609 LQCDFTDTRPVFLYSESEPGGMVTGKVILPNVLDPKFRVIRGSKWWRRERMAQRDAAFQA 668
Query: 623 CKKLHQIGALTDNLLP 638
KL++ G + DNLLP
Sbjct: 669 YVKLYREGLVNDNLLP 684
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 201/459 (43%), Gaps = 68/459 (14%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F T PSIMH+++ L+A L K +L ++++ V+
Sbjct: 932 PARDCSIDKLPLEFSLFALLT--PSIMHKVEIYLIAEQLNKTILKPVAFTDLSL----VV 985
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL HEGLLS K+ ++SN L
Sbjct: 986 TAISASVAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSY 1045
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N E + + ++++ +KT+ADV
Sbjct: 1046 AAVETGLDKFILVDVFTGAKW-RPRYNKVHLESEEQGI---------PQREMTTKTLADV 1095
Query: 1103 VEALIGAFLSTGGENVG----LIFLDRIGIKV--DFVNVPYQRQFQVHAE-RLVNVRHLE 1155
VEAL+GA GGE IFL I D +N Y + + R + +E
Sbjct: 1096 VEALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDRINALYNSVPEAYENIRTSWFQEIE 1155
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
SLL YSF LV+A TH S YQRLEF+GDA+LD++I +L+N L
Sbjct: 1156 SLLGYSFNKKVFLVQAFTHPSNP-GSTTSSYQRLEFVGDAILDHIIVHHLFNSSRNLPHF 1214
Query: 1216 YLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHILHA-SH 1248
+ MR+A N D A L++ K L +++ H S
Sbjct: 1215 DMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKKNTVTSLTTRKVFLWQYMRHGTSW 1274
Query: 1249 EL--------YKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDS- 1297
EL + + D E L +T+ W ++ K D+IES+ GAIF+DS
Sbjct: 1275 ELAAAQQQTADQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAIFIDSH 1334
Query: 1298 ----GCNREVVFQSIRPLLEPMITPETMR-FHPVRELTE 1331
C + + L M+ E+M HP + L +
Sbjct: 1335 GSLDACTAFLERIGLMKFLRRMLVEESMDIMHPKQRLGQ 1373
>gi|395504573|ref|XP_003756622.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer [Sarcophilus
harrisii]
Length = 1924
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 178/374 (47%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFVNVPY--------- 1137
+ K++AD VEAL+G +L++ GE +FL +G+KV D+ N Y
Sbjct: 1556 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWENTLYPSKDNFNSQ 1615
Query: 1138 QRQFQVH----------------------------------AERLVN-----VRHLESLL 1158
Q+ V+ AE+ +N + E +
Sbjct: 1616 QKNLSVNFASISVANLQSSLYKDLEYGCLKIPPRCMFDYPDAEKTLNHLISGFENFEKKI 1675
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NY+F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1676 NYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1735
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1736 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1791
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1792 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1851
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1852 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1905
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1906 AARRALRSLKANQP 1919
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 35 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNG 94
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQA A++ H+DLKVG+Y W W +E KH+VLVMT Q
Sbjct: 95 KRTVFLVNSANQVAQQASAVRTHSDLKVGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQ 154
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM ++ E S PRI G+TA
Sbjct: 155 VALNVLKNDYLSLSNINLLVFDECHLAILDHPYREIM-----KICEDYPS-CPRILGLTA 208
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
S + K +E + +KI LE ++ S T VL +
Sbjct: 209 SILNGKCDPAELE--EKIQKLEKILKSNAETATDLVVLDRY 247
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 25/276 (9%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR-------- 434
+I C IIFVER TA+VL L+ E P + +I G+ G + Q R
Sbjct: 441 NILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEF 499
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S
Sbjct: 500 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPIS 559
Query: 495 DYLLMVKSGD-STTQSRLENYLASGNKMRKEV---LSHASLPCSPL--NNHMYGEDFYHV 548
+Y+++ S + + L+ Y A +R + + P+ ++ ++
Sbjct: 560 NYIMLADSDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETETEPIVDDDDIFPPYVLRP 619
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGICTLYLPNNCPIQTV 605
+ T+++++ I YC+RLPSD + PK ++ TLYLP N P++
Sbjct: 620 DDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELSDGTFYSTLYLPINSPLRAA 679
Query: 606 IAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
I + + A L C+KLH+IG L D+L+P
Sbjct: 680 IVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 715
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 12/116 (10%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1301 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1360
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-------DNSGSYELN----DDSLFNGR 1084
+LG ++ LP + FDP + W+ PG N+ +E + D+ L NG+
Sbjct: 1361 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYIVNQDKSNTDKWEKDEMTKDNMLANGK 1416
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1297 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1349
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1350 MRSKKVSN 1357
>gi|380026731|ref|XP_003697097.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Apis
florea]
Length = 1362
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 230/515 (44%), Gaps = 92/515 (17%)
Query: 887 FDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFV 946
+ EP+LNG I + + + K +EP + L + I + +Y F
Sbjct: 861 LESEPVLNGPEIDVLNTEIYQYPWSKYQEPPNLFKHLED------LQLIQIEHYYHFMSE 914
Query: 947 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSF 1006
+ LQ L ML + C + ++V+ A+TTK + F+LE LETLGDS+
Sbjct: 915 TLTVPPLQIL--------MLKNSCGPD----PVQVMYALTTKLGNDAFNLERLETLGDSY 962
Query: 1007 LKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIP 1066
LK+ S L+ + EG L+ K +II N L G + +PG ++ +SF P I
Sbjct: 963 LKFIISLFLYNQFPKYAEGSLTTIKGKIIGNRNLYYCGIXKNIPGRMKVDSFVPLSNFIA 1022
Query: 1067 GDNSGSYELNDDSL-------------------FNGRKIYVT------------------ 1089
+ +L D L F+G T
Sbjct: 1023 PAYTVFRQLQDVLLEAKVSPTVLYEIQISQQEQFSGLMTETTKNLIQQKVLNWELAESQT 1082
Query: 1090 ------GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI---KVDFVNVPY-QR 1139
G + V K VAD VEALIG +L G L L I ++D + +
Sbjct: 1083 GMEHYLGIQTVSDKAVADCVEALIGVYLRNMGIKDTLTLLKWFQILPNEIDSNTLLFGTS 1142
Query: 1140 QFQVHAERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1194
+ + ++ +N +E+ L Y F++ L++A TH SY + CYQRLEFLGD
Sbjct: 1143 ENPIISKGDINSLMPWASEIETKLGYKFKNRGYLLQAFTHPSYSANHMTECYQRLEFLGD 1202
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
A+LD+LIT Y+Y L+PG LTD+RSA VNN +A +V+HGLH +L S ++
Sbjct: 1203 AILDFLITSYIYENCGNLNPGSLTDLRSALVNNITFACLTVRHGLHIALLCYS----PKL 1258
Query: 1255 NITVDSFEKLS------LGSTFGW----ESVTSF------PKALGDIIESLAGAIFVDSG 1298
N ++ F K + W ES + PK LGDI ES+ GAI++DS
Sbjct: 1259 NDIIERFVKFQEERNHIVNDELLWILLEESECNIAEHVDVPKVLGDIFESIIGAIYLDSN 1318
Query: 1299 CNREVVFQSIRPLLEPMIT--PETMRFHPVRELTE 1331
N VV++ I ++ I + + P+R L E
Sbjct: 1319 KNLMVVWEIIYSIMHKEIDEFSKNIPKQPIRILYE 1353
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 117/225 (52%), Gaps = 21/225 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQ+E E A KQN I++L TG+GKT IA+ML++ + +RK VF+V V
Sbjct: 11 RTYQIELFEIACKQNVIIYLPTGAGKTFIAVMLIKELSADIRKSYDEGGKHTVFIVNTVP 70
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQ+E I T L GD+G+D W W ++ +H+VLVMT QIL+D L Y
Sbjct: 71 LVMQQSEYITRLTGLSCAALSGDIGIDVWTNTEWNAQLKEHKVLVMTSQILIDALCHGYI 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
LN I ++I DECH A H IM F + + P++ G++A+ + S V
Sbjct: 131 FLNRINLIIFDECHRAVNDHPMRQIMQYFENY----SKEDQPKVLGLSATLLNSNVK--- 183
Query: 200 QDYWQKIH----DLETLMNSKVYTC----ASESVLSNFIPFSTAK 236
+KIH LE ++KV T AS+ +L + I K
Sbjct: 184 ---LEKIHSVIESLEITFHAKVVTIGIYGASKCLLLHLIQLECLK 225
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 390 CIIFVERVITAIVLQSLLSELLPRHCTWK---TKYIAG--NNSGIQCQSR----KKQNEI 440
CIIFV+R TA +L +L + + ++ +++ G N+ C+ K E
Sbjct: 294 CIIFVKRRFTAKLLYQILKNISKNNEEYRFLHPEFLIGFSNDPYRNCKESLCISKWNKEA 353
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ F+ GL N IVAT IL+EG+++ C+L+I +D V ++IQS+GRAR +S Y+L++
Sbjct: 354 LHRFKNGLSNCIVATDILDEGVNIPKCSLIIRYDLPMDVRTYIQSKGRARHVHSQYILLL 413
Query: 501 KSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV---------EST 551
G+ SR + +++ +L+ + P N + E + H E
Sbjct: 414 DKGNLRFISRYNEFKRIEQYLQELLLNKTNERNVPTENKIQNELYQHKIQPYVVISNEGQ 473
Query: 552 GTIATLSSSVSLIYFYCSRL 571
T +++ LI YC L
Sbjct: 474 KCCITEQTAIHLINKYCMSL 493
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 845 GQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY 904
+ Y +T V + NS F +N +Y +Y+E++G+ + ++P+L + I NY
Sbjct: 695 AETYIVTQVCDDITPNSCFPTDN--FLSYAHYYKEKHGLTIKNLKQPMLEVKAISRTINY 752
Query: 905 LSKCRQQKQKE-------PSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLL 957
+ Q + + P + L PELC I P + T +PSI+HR+ LL
Sbjct: 753 ILPRHMQSESKNRRYVDLPKNMKEHLVPELCTKINFPALY--WLKATILPSILHRISQLL 810
Query: 958 LAVNLK 963
+A +L+
Sbjct: 811 VAEDLR 816
>gi|258567596|ref|XP_002584542.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905988|gb|EEP80389.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1055
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 216/463 (46%), Gaps = 66/463 (14%)
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
++ C +P++ I +N L K R +K+K+ F + E + P S++ +
Sbjct: 583 LETCDWNQPVIRAELIQLRRNLLDK-RTEKEKQNEGECF-ICLEALTVSAIPASVAAL-A 639
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------ 995
F F P+I+ RL+S L+A L+ C + +++IP LEA+T + H
Sbjct: 640 FAF-PAIISRLESYLIA-------LEACQKLDLSIPAELALEALTKDSDNTEEHRAMQVH 691
Query: 996 --------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGD FLK A S LF +N E VK+ ++ N L K
Sbjct: 692 FQRGMGKNYERLEFLGDCFLKMATSISLFTMNPDNDEYDFHVKRMCLVCNQNLFKAALNL 751
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR---KIYVTGRKKVKSKTVADVVE 1104
KL FIR++SF + W G +L G+ K + + KT+ADV E
Sbjct: 752 KLYEFIRSQSFSRRGWYPEGL----------TLLQGKGQSKTAPENKHALADKTIADVCE 801
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKVDFVN-----------------VP-YQRQFQVHAE 1146
ALIGA +GG++ R + V FVN +P YQ AE
Sbjct: 802 ALIGASYLSGGKSHRFDMAVR-AVTV-FVNSSDHNVSDWQDYSKLYALPRYQTAVSDPAE 859
Query: 1147 RLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVY 1204
+ V ++ L Y F+ P LL A TH SY +P CYQRLEFLGD++LD +
Sbjct: 860 -IDLVAQIKEKLGYQFKYPKLLRSAFTHSSYPSAWAAVP-CYQRLEFLGDSLLDMACVEH 917
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY++YP P +LT+ + A V+N +VK GLH H+ H S + +I V+ E
Sbjct: 918 LYHRYPDKDPQWLTEHKMAMVSNKFLGCVAVKLGLHPHLRHFSAPIQSQIATYVEEIEAA 977
Query: 1265 SL---GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
L S W S + PK L D++E+ GAIF+DS EVV
Sbjct: 978 ELESGDSPDAWTSTSDPPKCLPDMVEAYIGAIFIDSDFRYEVV 1020
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 133/327 (40%), Gaps = 80/327 (24%)
Query: 367 LLTEKIVCLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY---- 421
LL+ K+ L + L +Y D +CI+F E+ TA +L L +++ T+Y
Sbjct: 40 LLSPKVRRLHQELSKYFERHTDTKCIVFTEKRHTARILSDLFAKI-------GTEYLRPG 92
Query: 422 ----IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIV---------------------ATS 456
+ + SG S ++Q V +FR G VN +V ATS
Sbjct: 93 LLIGVRSDPSGATNVSFRQQILEVVKFRNGEVNCLVIYLDMLPVGLLMSTRLIVVKFATS 152
Query: 457 ILEEGLDVQSCNLVI----------------MFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ EEGLD+ CNLV+ FD + T+ +IQSRGRAR NS + MV
Sbjct: 153 VAEEGLDIPDCNLVVRYANHLRMKMLYTEVDRFDLACTLTQYIQSRGRARHVNSTFAHMV 212
Query: 501 KSGDSTTQSRLENYLAS---GNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATL 557
+ D+ YL S + R + +H +L Y E H+ + G+
Sbjct: 213 EQ-DNVVHKESVKYLQSSEVSERSRVNIYTHVNLVLG------YYEPILHLFTKGSHPE- 264
Query: 558 SSSVSLIYFYCSRLPSDGYFKPTPK----FH-INKEMGICTLYLPNNCPIQTVIAQGNIK 612
+ R Y K T +H ++ C + LP P++ + + K
Sbjct: 265 ---------FLQRYRRPQYEKETSANVNYYHSFSQNAFHCEVVLPEKSPVRGLTGKPASK 315
Query: 613 TL--KQAACLEACKKLHQIGALTDNLL 637
L KQ+A E C L + G L D+ +
Sbjct: 316 KLVAKQSAAFETCLLLRKHGLLDDHFV 342
>gi|47210543|emb|CAF93935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 479
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 173/350 (49%), Gaps = 60/350 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------------------- 1130
+ K++AD VEAL+G +L++ GE +FL +G+KV
Sbjct: 136 IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEQGAAAGAAQSGRTAASDLC 195
Query: 1131 -DFVNVPYQRQFQVHAERLVNVRHL-------ESLLNYSFRDPSLLVEALTHGSYMLPEI 1182
++ +P R H + + HL E ++Y+F++ + L++A TH SY I
Sbjct: 196 YGWLKIP-PRCMLDHPDAEHTLNHLISGFENFERKISYTFQNKAYLLQAFTHASYHYNTI 254
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 255 TDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKY 314
Query: 1243 ILHASHELYKRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDIIE 1287
S EL+ +D F + L G +S PKA+GDI E
Sbjct: 315 FKAISPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFE 370
Query: 1288 SLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFSMKKPV 1344
SLAGAI++DSG + E V+Q P++ P+I + PVREL E + FS P
Sbjct: 371 SLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS---PA 427
Query: 1345 ASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 428 ERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 474
>gi|358253873|dbj|GAA53880.1| endoribonuclease Dicer [Clonorchis sinensis]
Length = 2384
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 186/406 (45%), Gaps = 106/406 (26%)
Query: 958 LAVNLKNMLLDHCMQNVTIP-TIKVLEAITTKKCQEDF-HLESLETLGDSFLKYAASQQL 1015
L++N + H + V P VL+A+T C DF +LE +ET+GDSFLK+ A+ L
Sbjct: 1718 LSLNNDQHRVTHHSERVYRPGPANVLQALTMS-CSNDFINLERMETIGDSFLKFVATVHL 1776
Query: 1016 FKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP-KMWIIPG------- 1067
+ TY N HEG LS + R++ N+ L +LG + L + F P + W+ PG
Sbjct: 1777 YLTYPNAHEGKLSHMRSRVVCNSNLYRLGRAKHLQDRMIACKFGPYENWVPPGYVVRHDP 1836
Query: 1068 --------------DNSGSYELN----------DDSLFNGRKIY---------------- 1087
+ E+N DD + G K+Y
Sbjct: 1837 RLVTKADHNSLQSPTRQSNKEVNLNIWSTDTLMDDEVLLGMKVYTEEIKPIDNFAVSQWD 1896
Query: 1088 -----------------VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-- 1128
VT ++ + K++AD VEALIG +L+ GE L + GI
Sbjct: 1897 PNSPEVVKTQKSVDHCLVTIQQAIPDKSIADCVEALIGCYLTARGERSALRLMRWFGIDC 1956
Query: 1129 ------KVDFVNVPYQ-----------RQFQVHAERLV-NVRHLESLLNYSFRDPSLLVE 1170
++ P+ R+ Q+ RL LE+ LNY FRDP+LL++
Sbjct: 1957 LPGPDVRLRPRGAPWAIPPPLIPLNDPRRAQLEEARLSWRFDELEAKLNYKFRDPTLLIQ 2016
Query: 1171 ALTHGSY-----MLPEIPR-------------CYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
A TH SY LP P CYQRLEFLGDAVLDY+IT +LY
Sbjct: 2017 AFTHPSYHQLRKTLPVNPDDDPFSSTFLTDTDCYQRLEFLGDAVLDYVITRFLYEDSQQH 2076
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
SPG LTD+RSA VNN+ +A SV+ GLH+ + +S +L I++ V
Sbjct: 2077 SPGVLTDLRSALVNNNIFAALSVRAGLHQFLRASSPQLLHTIDVFV 2122
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 16/144 (11%)
Query: 19 LPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR--SYAYLLRKPSPFVAVFLVP 76
LP+ YQL+ L+ A ++NTI+ L K+ I + L+R Y +L ++ A++
Sbjct: 25 LPYP--YQLDLLDTAYERNTIICLSNELTKSFITLSLIREMGYDHLGKR-----ALYFTQ 77
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL---LDG 133
+ ++ + A + HT L V + W + W +E+S+H V VM+P ++ L G
Sbjct: 78 EKNII-ETAHCLARHTGLSVVHFQYKEPFIGWRFSDWTKELSRHHVTVMSPWLIPCVLSG 136
Query: 134 LRLSYFKLNMIK---VLILDECHH 154
F++ +++ +L + ECHH
Sbjct: 137 SSPDEFQVFLLENFYLLAVSECHH 160
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET--MRFHPVRELTEYCQK 1335
PKALGDI ESLAGA+F+DS + + V+ PL++ I T + PVR+L E +
Sbjct: 2255 IPKALGDIFESLAGALFLDSDLSLDTVWTVFYPLMKERIERYTACIPKSPVRQLLEL-EP 2313
Query: 1336 NHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++P + G+ +V V GR + + + + AK +A K L+ LR
Sbjct: 2314 EGTKFERPRRT-ADGRISVCAHVLGKGRFYG---IGRNYRLAKSLAAKRALRVLR 2364
Score = 48.5 bits (114), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 437 QNEIVEEFRRGLVNVIVAT----SILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q E + +FRRG +N+++AT S G ++ CNLV+ P R++ ++ S+ R+R+
Sbjct: 693 QEETISKFRRGSINLLIATQPAVSAAAGGAELPRCNLVVALQPPRSLAEYLSSKARSRL 751
>gi|126290301|ref|XP_001367933.1| PREDICTED: endoribonuclease Dicer-like [Monodelphis domestica]
Length = 1923
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 177/374 (47%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFVNVPY--------- 1137
+ K++AD VEAL+G +L++ GE +FL +G+KV D+ Y
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWETTLYPSKDNFNSQ 1614
Query: 1138 QRQFQVH----------------------------------AERLVN-----VRHLESLL 1158
Q+ V+ AE+ +N + E +
Sbjct: 1615 QKNLSVNYASISVANLQSSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1674
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NY+F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 1735 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSEL 1790
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1791 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1850
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1851 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1904
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1905 AARRALRSLKANQP 1918
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQA A++ H+DLKVG+Y W W +E KH+VLVMT Q
Sbjct: 94 KRTVFLVNSANQVAQQASAVRTHSDLKVGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQ 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L+ L+ Y L+ I +L+ DECH A H Y IM ++ E S PRI G+TA
Sbjct: 154 VALNVLKNDYLSLSNINLLVFDECHLAILDHPYREIM-----KICEDCPS-CPRILGLTA 207
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
S + K +E + +KI LE ++ S T VL +
Sbjct: 208 SILNGKCDPAELE--EKIQKLEKILKSNAETATDLVVLDRY 246
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 143/277 (51%), Gaps = 27/277 (9%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR-------- 434
+I C IIFVER TA+VL L+ E P + +I G+ G + Q R
Sbjct: 440 NILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEF 498
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S
Sbjct: 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPMEYRSYVQSKGRARAPIS 558
Query: 495 DYLLMVKSGD-STTQSRLENYLASGNKMRKEV---LSHASLPCSPL--NNHMYGEDFYHV 548
+Y+++ S + + L+ Y A +R + + P+ ++ ++
Sbjct: 559 NYIMLADSDKIKSFEDDLKTYKAIEKILRNKCSKSVDTGETETEPIVDDDDIFPPYVLRP 618
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG----ICTLYLPNNCPIQT 604
+ T+++++ I YC+RLPSD + PK +E+ TLYLP N P++
Sbjct: 619 DDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCK-TRELPDGTFYSTLYLPINSPLRA 677
Query: 605 VIA--QGNIKTL-KQAACLEACKKLHQIGALTDNLLP 638
I Q N L ++ L C+KLH+IG L D+L+P
Sbjct: 678 AIVGPQMNCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 12/116 (10%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1300 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1359
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-------DNSGSYELN----DDSLFNGR 1084
+LG ++ LP + FDP + W+ PG N+ +E + D+ L NG+
Sbjct: 1360 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYIVNQDKSNTDKWEKDEMTKDNMLANGK 1415
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1296 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1348
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1349 MRSKKVSN 1356
>gi|307198394|gb|EFN79336.1| Endoribonuclease dcr-1 [Harpegnathos saltator]
Length = 1479
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 203/445 (45%), Gaps = 88/445 (19%)
Query: 972 QNVTIPTI--------------KVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
+N+T+P + ++L+A+TTK C + F+LE LETLGDS+LK+ S L+
Sbjct: 1031 ENITVPPLNILAEKHSYGPGPTEILQALTTKMCHDMFNLERLETLGDSYLKFITSLFLYH 1090
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP-KMWIIPG--------- 1067
T+ EG L+ K RII N L G + +PG ++ + F P +I+P
Sbjct: 1091 TFPMLSEGQLTAIKGRIIGNRNLYYNGVNKGIPGRLKIDEFAPMSTFIVPAYTVFRPLQK 1150
Query: 1068 -----DNSGS--YELN--DDSLFNGRKIYVTGR------------------------KKV 1094
D S + YEL D+ G T + +
Sbjct: 1151 TLLDQDVSSNILYELPVPDEERLTGDISASTSNTIQNTISQWSLAEIQTGMEHYLNIQII 1210
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI----KVD-FVNVPYQRQFQVHA---- 1145
K ++D +EALIG +L G + L GI K+D +N +
Sbjct: 1211 SDKAISDSIEALIGVYLRNTGISGAAKLLKWFGILPDIKIDELLNGTNSSNPIIGIGNPN 1270
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
E + +E L Y F + + L++A TH SY + I CYQRLEFLGDAVLD+LIT ++
Sbjct: 1271 EHMPWADSIEKRLGYKFNNRAYLLQAFTHPSYSVNRITDCYQRLEFLGDAVLDFLITCHI 1330
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
Y LSPG LTD+RSA VNN +A +V++GLH +L + +L++ IN F K
Sbjct: 1331 YEFCGNLSPGALTDLRSALVNNITFACLAVRYGLHTCLLAYAPQLHEMIN----RFVKFQ 1386
Query: 1266 LGSTFGWESVT----------------SFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
+ PK LGD+ E+L GAI++DS N V++ +
Sbjct: 1387 EDRNYAINDELLWVLLEEEDCNIAEYIDVPKVLGDLFETLIGAIYLDSNRNLAKVWEMVY 1446
Query: 1310 PLLEPMIT--PETMRFHPVRELTEY 1332
+ I + +PVR + E+
Sbjct: 1447 SFMHKEIDEFSRNVPKNPVRVIYEH 1471
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 11/224 (4%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSPFVAVFLVPKVV 79
R YQ++ E A++ N IV+L TG+GKT IA+MLL+ ++ ++ + ++F+V V
Sbjct: 11 RAYQIDLYEKAVENNIIVYLPTGAGKTYIAVMLLKKFSGEIQMSYSKNGKRSIFIVNTVA 70
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQ + I+ HT L Y GDM VD W W E+ ++VLVMT QI +D + Y
Sbjct: 71 LVRQQTDYIRRHTCLTCKGYSGDMKVDCWKEDQWILELDANQVLVMTAQIFVDTITHGYI 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
KL+ I +++ DECH A H IM F + PRI M+A+ + + + S +
Sbjct: 131 KLDRINLIMFDECHRAVNNHPMRQIMQLFE----KYCKKQQPRILAMSATLLNANIKSDK 186
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD 243
+ I DLE +KV T S + + + K KYD
Sbjct: 187 IE--STIKDLEVTFQAKVATVKSTDCIQEYC--TNPKENIIKYD 226
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 16/197 (8%)
Query: 390 CIIFV-ERVITAI---VLQSLLSE------LLPRHCTWKTKYIAGNNSGIQCQSRKKQNE 439
CIIFV ER +T + +L++L LLP N + C + K Q E
Sbjct: 416 CIIFVKERFMTQVLYHILKTLSMHDDQYHFLLPDFIVGCHNSPYKNTREVLCLA-KWQKE 474
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
+++ FR+GL N IVAT +++EG+DV C LV+ +D +++QS+GRAR S Y ++
Sbjct: 475 VMQRFRKGLSNCIVATDVVDEGIDVPLCALVVRYDLPTDYRAYVQSKGRARHGTSHYTVL 534
Query: 500 VKSGDSTTQSRLENYLASGNKMRKEVLSHA--SLPCSP-LNNHMYGEDF--YHVESTGTI 554
V D T SR +++ + KM+ ++ + SLP + N +Y + Y V + G +
Sbjct: 535 VPRDDETFLSRYKDFKITELKMKTILIGNEVRSLPTDKEIENGLYQHEILPYTVSAAGIV 594
Query: 555 ATLSSSVSLIYFYCSRL 571
T ++ VS++ YC+ L
Sbjct: 595 LTENNVVSILNRYCNSL 611
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 32/205 (15%)
Query: 774 RDNLEIDYLLLPSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCK 833
+DNLE +L++P +DW+ D+ K+ + + ++ + H +
Sbjct: 749 KDNLENSFLIVPLN---VDWE------INWDDVRKYQ-HVEKVPSSTLSHVRYSDYEVTL 798
Query: 834 IHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLL 893
++ S +P +Y +T V L SLF ++ TY +YEE++GI++ ++PLL
Sbjct: 799 VNPSYRTSP---SVYIVTQVCDDLTPTSLFPTDD--FETYTHYYEEKHGIKIQNLKQPLL 853
Query: 894 NGRRIFHVQNY---------LSKCRQQKQKEPSKISFE--LPPELCRIIMAPISLSTFYS 942
+ I N LSK R+ E FE L PELCR+I P +L +
Sbjct: 854 EVKAISTKINCIKPRSMKPGLSKRRRADVLE----DFEEHLIPELCRMICFP-ALYWLKA 908
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLL 967
T +PSI+HR+ LL+A +L+ ++
Sbjct: 909 ST-LPSILHRITHLLIAEDLRETIV 932
>gi|350289218|gb|EGZ70443.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1547
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 189/677 (27%), Positives = 305/677 (45%), Gaps = 87/677 (12%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
++VS AR YQLE E +LKQN IV ++TGSGKT +A++ + A L + +
Sbjct: 66 DQVSTPAALTARAYQLEMFEASLKQNIIVAMDTGSGKTQVAVLRI---ARELEQRDKRI- 121
Query: 72 VFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQI 129
FL P V L QQ + ++ +K G GVD W + A W + ++V T QI
Sbjct: 122 WFLTPTVALARQQHQVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQI 181
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L D S+ +L+ + ++++DE H+ G H A +MTE Y + G +P I G+TAS
Sbjct: 182 LFDANAHSFVRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAG-LPVPSILGLTAS 240
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNS--KVYTCASESVLSN-----FIPFSTAKFKFYKY 242
P+KS + I LE ++++ + T E +L++ + S K
Sbjct: 241 PLKS-------NNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSKGPGT 293
Query: 243 DEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSEL-G 300
+ P L T + A L ++ + L L + E R+K+ + + EL G
Sbjct: 294 EPTPTDLMTRFLE--AYHRLDISKDPDVLLLKAQRTERAREKLRQMVTKKDTLAQKELRG 351
Query: 301 VW-LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
V+ AL I + +D++ + + S L P IG+
Sbjct: 352 VYNRALLVRREIGPWAADYY------------LTRTVSHMLAELERGEPPAQHRYIGEAL 399
Query: 360 K------FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLLSELLP 412
+ + + L+ K+ L++ L ++ +D I+FV ERV+ +IV + ++
Sbjct: 400 RSIPIPAISKEPIQLSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIV-----THIIS 452
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFRRGLVNVIVATSILEEGL 462
H K +Y + G K +N + +E FRRG N++VATS+LEEG+
Sbjct: 453 THPLTKDRYRTASMIGTASVPGKARNHMDMTKKEDMTSLEGFRRGRFNLLVATSVLEEGI 512
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK--SGDSTTQ-SRLENYLASGN 519
DV CNLVI FD + SFIQ RGRAR +S LMV+ SG+S LE +
Sbjct: 513 DVPICNLVICFDEPSNIKSFIQRRGRAREVSSTLYLMVQNASGESAMDWHNLERLMK--E 570
Query: 520 KMRKEVLSHASLPCSPLNNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPS----- 573
+ E+ +A L L++ G VESTG T+ S + +C+++ S
Sbjct: 571 RYEDEMRQNAELEL--LDDPRIGSYPVLEVESTGARMTIRDVRSHLNHFCAKVSSRSRYL 628
Query: 574 --DGYF-----KPTPKFHINKEMGICTLYLPNNCPI-----QTVIAQGNIKTLKQAACLE 621
+ YF P P + + T++LP + +++ + K A +
Sbjct: 629 QKEPYFVIRQVSPDPASPGRRTLLQATVHLPASLAPDLRRHESLWTWTSEKLAIMDASFQ 688
Query: 622 ACKKLHQIGALTDNLLP 638
A K L+ G + +NLLP
Sbjct: 689 AYKALYNAGLVNENLLP 705
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 23/271 (8%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+P+ ++ L+A +L L C+Q +P I A+ + + + E LE +GD+
Sbjct: 963 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPLITT--ALISSGSRGPTNYERLEFIGDT 1019
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII 1065
LK+ A + N+HE LLS K+++++N LC+ + L +I S K W
Sbjct: 1020 ILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYI-IHSAASKKW-- 1076
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG-----ENVGL 1120
+ +D L + +++ SK VADVVE+LIGA GG E V L
Sbjct: 1077 ------RPKFVEDYLDEMKSPESAETRQMSSKMVADVVESLIGAAYMCGGMSKALECVAL 1130
Query: 1121 IFLDRIGIKVDFVNVPYQRQ--FQVHAERLVNVRHLESL---LNYSFRDPSLLVEALTHG 1175
+ + + + R F+ + + + LE L ++Y+F SLL+EA+TH
Sbjct: 1131 LLPTPKSSQFKWQEISLSRAQLFEFAPKDAILSKQLEPLEKAMSYTFHKKSLLIEAMTHP 1190
Query: 1176 SYM-LPEIPRCYQRLEFLGDAVLDYLITVYL 1205
S L CY+ LEFLGDA+LD ++ L
Sbjct: 1191 SCAGLSTNESCYELLEFLGDAILDVIVVKRL 1221
Score = 48.5 bits (114), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
P Y+RLEF+GD +L + + +P L+ + VNN +S GL ++
Sbjct: 1007 PTNYERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEY 1066
Query: 1243 ILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
I+H++ R D +++ + ++S K + D++ESL GA ++ G ++
Sbjct: 1067 IIHSAASKKWRPKFVEDYLDEMKSPESAETRQMSS--KMVADVVESLIGAAYMCGGMSK 1123
>gi|380706515|gb|AFD97515.1| dicer, partial [Hymenolepis microstoma]
Length = 1897
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 216/454 (47%), Gaps = 76/454 (16%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+++T + ++E LET+GDSFLK+A + L+ Y + EG LS+ + ++ N+ L
Sbjct: 1417 ILQSLTRLAAGDFINMERLETIGDSFLKFAVTTYLYLKYPDAQEGSLSLFRSHVVENSNL 1476
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
+ GC +KLPG I +F+P+ W+ P N + + R V + + +K++
Sbjct: 1477 YRFGCGKKLPGRIVGVAFEPQENWLPPC--YVCNSDNSSADDSSRLQMVQTHQFLSNKSI 1534
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDFVNVPYQ--------RQFQVH 1144
AD VEAL+G +L+ GE L L G+ ++ P++ ++
Sbjct: 1535 ADCVEALVGCYLTERGERSALKLLQWFGVECLPPSSEMQPTGAPWKMPDERGLTEAEKIE 1594
Query: 1145 AERLVNVRH---LESLLNYSFRDPSLLVEALTHGS----YMLPEIPRC----------YQ 1187
+R+ +V LE+ + Y F++ LL+EALTH + + P + Y+
Sbjct: 1595 IDRIYHVSRYDKLENTIGYRFKNRRLLIEALTHSTCRDLHSNPSVNNTPSSVFFGNGGYE 1654
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPG-----LSPGYLTDMRSASVNNDCYALSSVKH-GLHK 1241
RLEFLGDAVLDY +T L+ G LSPG LTD+RSA VNN + +V H GLH
Sbjct: 1655 RLEFLGDAVLDYTVTRVLFESTDGETVRELSPGGLTDLRSALVNNAVFGALAVTHCGLHA 1714
Query: 1242 HILHASHELYKRINITVDSFEKLSLGSTFGWESVT------------------------- 1276
++ + L + + + +S GS +T
Sbjct: 1715 YLRGTAPYLTEGTSAFLRHIRNVSRGSLNSKRLLTPDSNTVARLNDAENQADSGAVRPSN 1774
Query: 1277 ----SFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELT 1330
PKALGD+ ESLAGA+F+DSG +++ PLL I + PVR L
Sbjct: 1775 EMEAEVPKALGDVFESLAGAVFLDSGLCLNTLWRIFFPLLRERIERYSTCVAKSPVRRLL 1834
Query: 1331 E-YCQKNHFSMKKPVASRISGKAAVTVEVQANGR 1363
E Y ++ F +KP+ R GK + V V GR
Sbjct: 1835 EQYPERVKF--EKPMV-RPDGKIRLVVRVVGIGR 1865
Score = 43.9 bits (102), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 54/223 (24%)
Query: 437 QNEIVEEFR-RGLVNVIVAT-SILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
Q E V FR G VN++V T S L + CNLV F PS ++ +++ ++ R R
Sbjct: 642 QEETVANFRCGGEVNLLVTTQSGLAAASTLPKCNLVASFHPSNSIETYLLAKSRLR---- 697
Query: 495 DYLLMVKSGDSTTQSRLENYL-ASGNKMRKE-------VLSHASLPCSPLNNHMYGEDFY 546
L+ +K TT++RL ++L S MR + ++ S LN H D
Sbjct: 698 --LVSIK----TTKARLWHFLEPSKISMRNQFQEIERMLIQRCSRSGLSLNEH--DVDLK 749
Query: 547 HVESTGTI---ATLSSSVSLIYFYCSRLPSDGYFKPTPKFH--------INKEMG----- 590
V+ S ++ +I YC+RLP + + P+++ + E+G
Sbjct: 750 FVDEAFDFLPKRNASRAIDVINHYCARLPCNFMTRLAPRWNLISRPLVDVKSELGDSGKI 809
Query: 591 ---------------ICTLYLPNNCPIQTVIAQGNIKTLKQAA 618
C L +P+N PI V+ G+ K+ A
Sbjct: 810 LTCPDTDHKDPKVAYRCALQMPSNSPINQVV-WGDWSVCKKMA 851
>gi|256087296|ref|XP_002579808.1| dicer-1 [Schistosoma mansoni]
Length = 2174
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 172/352 (48%), Gaps = 55/352 (15%)
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI------------------- 1128
+T ++ + K++AD VEALIG +L+T GE L + GI
Sbjct: 1808 ITIQQAIPDKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSL 1867
Query: 1129 -KVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY---------- 1177
K ++++ R A + LES LNY+F+DPSLL++A TH SY
Sbjct: 1868 PKSNYLDTDENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSN 1927
Query: 1178 --------MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDC 1229
M CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN+
Sbjct: 1928 NLSDQSNLMFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNI 1987
Query: 1230 YALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG--------STFGWESVTSFPKA 1281
+A +V+ GLHK+ +S +L I++ V + +T PKA
Sbjct: 1988 FAALAVRIGLHKYFRASSPQLLHTIDVFVRKSNNANNTIPTNTGHLTTNRLSDDVEIPKA 2047
Query: 1282 LGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET--MRFHPVRELTEYCQKNHFS 1339
L DI ESLAGAIF+DS + + V+Q P+++ I T + PVR+L E +
Sbjct: 2048 LSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKERIERYTACIPKSPVRQLLELEPE---G 2104
Query: 1340 MKKPVASR-ISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
K A R + G+ +V V GR + + + + AK +A K L+ LR
Sbjct: 2105 TKFERARRMVDGRISVCAHVLGKGRFYG---VGRNYRLAKSLAAKRALRVLR 2153
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 981 VLEAITTKKCQEDF-HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+L+A+T C DF +LE +ET+GDSFLK+ + L+ TY HEG LS + RI+ N+
Sbjct: 1637 ILQALTMS-CSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSN 1695
Query: 1040 LCKLGCEQKLPGFIRTESFDP-KMWIIPG 1067
L +LG + L + F+P + WI PG
Sbjct: 1696 LYRLGKAKDLQNRMIGCKFEPHENWIPPG 1724
Score = 43.5 bits (101), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 437 QNEIVEEFRRGLVNVIVAT-----SILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q E + FRRG +N++VAT ++ G ++ CNLVI ++ ++ S+ R+R+
Sbjct: 628 QEETITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRL 687
Query: 492 QN 493
N
Sbjct: 688 VN 689
>gi|328716579|ref|XP_001944314.2| PREDICTED: endoribonuclease Dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1609
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 232/516 (44%), Gaps = 87/516 (16%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PE + I + I+++ Y + +H +Q+ + + + L DH + ++ +L+A
Sbjct: 1077 PEDSKYIKSEININ--YKINDSVNEVHGVQTGTFSFDFQPDLNDHPGPSPSV----LLQA 1130
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHE-------------------G 1025
+T + +LE LET+GDSFLKYA + L+ T+ N HE G
Sbjct: 1131 LTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSNLNLYRLG 1190
Query: 1026 LLSVKKERIISNA--------ALCKLGCEQKLPGFIRTESFDPKMWII--------PGDN 1069
L + ER+IS C KL + S +W + P D
Sbjct: 1191 KLKMFGERMISTKFEPHDNWLPPCYF-VPHKLEKALINASIPTTLWNMITLPTFKDPTDK 1249
Query: 1070 S------------GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
+ ++ + LF + + + K++AD VEALIGA+L + G
Sbjct: 1250 EIEEVIQQFKVGFSNEDIENTPLFVPYNL--VTQHSIPDKSIADCVEALIGAYLISCGAR 1307
Query: 1118 VGLIFLDRIGIKV----DFVNVPYQRQFQVHAERLVN------------VRHLESLLNYS 1161
L+F+ +GI+V D + Y + R V+ E L Y
Sbjct: 1308 GALLFMSWLGIRVLPTLDDSKLGYLKPPSSPLLRNVDDPEGELTKLMDGFESFEQHLGYH 1367
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
F+D S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+R
Sbjct: 1368 FQDRSYLLQAMTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLR 1427
Query: 1222 SASVNNDCYALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTFGW------- 1272
SA VNN +A +V++G HK+ H S L + +T+ ++ F +
Sbjct: 1428 SALVNNTIFASLAVRNGFHKYFKHLSPGLSDVVCRFVTIQEENGHTIDEEFYFLGEDDCE 1487
Query: 1273 --ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRE 1328
E V PKALGD+ ES+AGAI++DS + + V++ ++E + + + P+RE
Sbjct: 1488 EAEDV-EVPKALGDVFESVAGAIYLDSNMSLDTVWKVYHKIMENEMEQFSKNVPKSPIRE 1546
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRL 1364
L E + KP + V VE+ G
Sbjct: 1547 LLE-LEPETAKFSKPEKLADGRRVRVVVEIFGKGEF 1581
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 137/601 (22%), Positives = 250/601 (41%), Gaps = 85/601 (14%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
KKQ E + FR+ NV++ T +LE G+D+ CNLVI ++ + S+++S+ RA+ ++
Sbjct: 246 KKQEETLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKSRAKTLDA 305
Query: 495 DYLLMV-KSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV----- 548
Y+LM + S SRL+ Y + + +LSH +L + Y + +
Sbjct: 306 HYILMFDEDATSNILSRLKLY----KDINQMLLSHCTLKDIDMEKETYADRYNWFVTPFK 361
Query: 549 ---ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNN 599
+ +++++ L+ YC++LPSD + K +P + N+ M +C++ LP N
Sbjct: 362 PGKKEDSAFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKTQSVVYENQPMFVCSIRLPIN 421
Query: 600 CPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYN 656
PI+ I + K+ A LE C++LH G L D L P I E A +E
Sbjct: 422 SPIKHDIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQP-ITKESFHALFNADEVLP 480
Query: 657 AEHPIYFPPELVNQSPQDTKITYH-----------CYLIELKQHFNYDISARNIVLAMRT 705
P + P K + C +E K Y I N+ +
Sbjct: 481 DAEDALIPWDTEEPRPGTNKRRQYYYKRIAEALNDCRPVENKPCHLYAI-LLNMNCPVPE 539
Query: 706 ELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD-----HN 760
E + ++++ E G + +KH+ I P C ++L + D H
Sbjct: 540 EQNTRGRRIHPPEESVHGFGILTIKHIPSIPPFP-IYTRCGEVYVSLKPIKTDMFLTQHQ 598
Query: 761 LDKLNEILDGFELRDNLEID--------------YLLLPS----TGQL-IDWKTVATVLF 801
LD + L+ + + L + Y ++P+ +G + IDW + +
Sbjct: 599 LDNIATFLN-YTFTNVLRLQKCHVAFDPTTTHNCYYIVPTLRDASGSIDIDWNFLDNMHK 657
Query: 802 PRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANS 861
RDN N M + + T N Q + + + HLN S
Sbjct: 658 CRDNKLSIITNEDRMNFQPDIDVLKDAVVTPWYRNQ-----EQPQYFYVAEICTHLNPKS 712
Query: 862 LFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYLSK--------- 907
F + + T++ +Y +Y +++ +PLL+ R F Y+++
Sbjct: 713 PFPGSIENYKTFEDYYYLKYSLKIQNLEQPLLDVDHTSARLNFLTPRYMNRKGVILPTSS 772
Query: 908 --CRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNM 965
++ K+ S+ L PELC + + P S+ + +P I++R+ +LLLA ++ +
Sbjct: 773 DATKRAKRDNLSQKQI-LVPELCNVHLFPASM--WRKAVSLPCILYRINALLLADEIRTI 829
Query: 966 L 966
+
Sbjct: 830 V 830
>gi|158706450|sp|A2QX45.2|DCL22_ASPNC RecName: Full=Dicer-like protein 2-2; Includes: RecName:
Full=Endoribonuclease dcl2-2; Includes: RecName:
Full=ATP-dependent helicase dcl2-2
Length = 1362
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 181/704 (25%), Positives = 300/704 (42%), Gaps = 118/704 (16%)
Query: 8 SDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS 67
+D+T +++ R YQLE L +LK+N IV + TG+GKT +AI LR A + + S
Sbjct: 9 ADSTPGTTSNMELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVAI--LRILADIDKGNS 66
Query: 68 PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTP 127
L P V L QQ ++ + G + D A W +S ++ V T
Sbjct: 67 DKFVWLLCPTVALSEQQY--------IQYATVFLPSGAE--DKAIWDNALSGIKIAVSTY 116
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
Q+L D L + KL+ + +LI DE HH + H IM YH+ ++G NLP+I G+T
Sbjct: 117 QVLYDALSHGFVKLSQMSLLIFDEAHHCKKDHVANKIMQVHYHKQHQSGVQNLPKILGLT 176
Query: 188 ASPIKSKVSSSE-------------QDYWQKIHDLET----LMNSKVYTCASESVLSNFI 230
ASPI S +SS E + Y+ ++ L YT + SV + +
Sbjct: 177 ASPILSDLSSLEIVESNLGSICKTPRQYYAQLLQFTNRPLILPRLPTYTIPNCSVKAPIL 236
Query: 231 PFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINS 290
DE+P + ++ +LKH R + IN
Sbjct: 237 EKLCGILS--SEDEVPS------SSKMKSKQLKHIRRF-------------MQTSESIN- 274
Query: 291 TLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG 350
ELG+W A + + F G +T I +G D + ++T +
Sbjct: 275 ------QELGIWAATEYMRKSIMH----FKESMRMGAEKTNISNYGKDFAMEILTRLGKL 324
Query: 351 AEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSE 409
+ S + ++ CL++ L + YR E ++FV + T + L+ L+
Sbjct: 325 QDCSPA------IQPEEISPMCQCLLDELSKAYR--EGFCGLVFVTQRATVLALKWLIEN 376
Query: 410 ------------LLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSI 457
+ T +K GN I + Q E +E+FR+G +N+I+ T
Sbjct: 377 HPLTSHLFTCGTFIGMSTTQYSKTELGNLHDI-----RNQTETLEKFRQGSLNLIITTDA 431
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV--KSGDSTTQ----SRL 511
LEEG+DV +CN V+ F+ ++ SFIQ RGRAR +NS +++++ +SG + +
Sbjct: 432 LEEGIDVPACNTVLNFNCQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEI 491
Query: 512 ENYLASGNKMRKEVLSHASLPCSPLNNHMYGED--FYHVESTGTIATLSSSVSLIYFYCS 569
E N R+++ P + L+ Y ++ TG + +V +Y +CS
Sbjct: 492 ELVQKLQNAERRQI------PANELDFDKYERISLSLDIDRTGAQLIMREAVGYLYNFCS 545
Query: 570 RLPSDGYFKPTPKFHI---NKEMGICTLYLPNNCP-----IQTVIAQGNIKTLKQAACLE 621
+LP+ Y P F N + LP+N + + +K ++ A L+
Sbjct: 546 KLPAQLYVSNKPLFTYERNNYGRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQ 605
Query: 622 ACKKLHQIGALTDNLLP---------DIVVEKHDAQKRGNEPYN 656
A K L+Q G + D L+P DI+ H + + +P+
Sbjct: 606 AYKALYQAGLVNDYLVPTQVSDHLEGDIIFRSHYSIQNQLDPWQ 649
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 192/436 (44%), Gaps = 75/436 (17%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IPTIKVLEAITTKKCQEDFHLESLE 1000
F PSI H ++ ++A L+ L +++VT I + + T+ + + F L L
Sbjct: 875 FTPSISHEVEVYMIAQILRQEL---SLRSVTPWQRIDLLAIAIRPTSIEHRATFRL--LA 929
Query: 1001 TLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP 1060
+GD+F+KY + QLF + HEGLLS K+R +S+A L + L F+ ++ +
Sbjct: 930 FIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLNG 989
Query: 1061 KMWIIP---GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
K W+ P G S E ++ + + T+AD+ +A++GA + GG N
Sbjct: 990 KRWVPPLVSGIEPASNEAR--------------QRSIGAATLADMTKAVVGAAFTDGGLN 1035
Query: 1118 VGLIFLDRIGIKVDFVNVP------YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEA 1171
+ K+ N Y + +A + +E LL Y+F D SL VE+
Sbjct: 1036 QAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVES 1095
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
+TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1096 MTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLT 1155
Query: 1232 LSSV---------------KHGLHKHILHASHELYKRINITVDSF------------EKL 1264
++ +H +HK++ S L+ + + D+ EK
Sbjct: 1156 FIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKA 1215
Query: 1265 SLGSTFGWESVTSFP----KALG------DIIESLAGAIFVDS-----GCNREVVFQSIR 1309
WE +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 1216 DAIKHELWEQ-RFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIV 1274
Query: 1310 PLLEPMITPETMRFHP 1325
PLLE I+ + HP
Sbjct: 1275 PLLEHFISHQITTDHP 1290
>gi|384494893|gb|EIE85384.1| hypothetical protein RO3G_10094 [Rhizopus delemar RA 99-880]
Length = 407
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 210/418 (50%), Gaps = 37/418 (8%)
Query: 917 SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 976
+K + L PE RI PIS S + + +P I+ ++ + LL LK + H +Q I
Sbjct: 7 TKSTVWLKPEEHRIF--PISASVYQASQLIPDILLQIDAFLLIQQLKTV---HNLQ--FI 59
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
+LEA T+ E LE LGD+ LK+ S L+ Y E L+ ++ + S
Sbjct: 60 DDELMLEAFTSPSANRKQDYERLEFLGDAVLKFIVSSYLYAKYPTYSEAELTSLRQVMTS 119
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N + + + KL +I ++S + W P ++ DS N K ++T V
Sbjct: 120 NKSFANIAKDLKLHRYIISQSTVRRFWRPP-----HFQNVLDS--NKIKHWLT-HHLVSD 171
Query: 1097 KTVADVVEALIGA-FLSTGGENVGLIF--------LDRIGIKVDFVNVPYQRQFQVHAER 1147
T+AD++E+ +GA FLS + G I+ L I + D ++ +
Sbjct: 172 NTLADIIESTVGAAFLSQSID--GAIYAATQLKLPLGSIKVWSDLRHIWTPSPASATGQI 229
Query: 1148 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++V + +L Y F++ L+ EALTHGS M +P CY+RLEFLGDA+LD+ +T Y+Y
Sbjct: 230 NIDVVRVGEMLGYQFKNYLLVQEALTHGSVMDSLVP-CYERLEFLGDAILDFFVTQYIYQ 288
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK--LS 1265
K+P +PG L ++R +SVN+ + + GL KHI+H S E+ I + ++ K S
Sbjct: 289 KHPTAAPGILHNLRKSSVNHHILSAVCLNMGLDKHIIHVSAEIAASI-LKAEAIHKDMQS 347
Query: 1266 LGSTFG--WESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRPLLEPMIT 1317
G W + PK L D+IESL GAI VDSG + E + +P+LE I+
Sbjct: 348 KGKDTDEYWLHLNP-PKVLSDVIESLMGAILVDSGFDINQVEEFFERWFKPILEKHIS 404
>gi|255933596|ref|XP_002558177.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582796|emb|CAP80997.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1393
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 181/691 (26%), Positives = 294/691 (42%), Gaps = 117/691 (16%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAI----------------MLLRSYAYLLRK 65
+R YQLE LE + K+N IV ++TGSGKT + + +LR L
Sbjct: 15 SRGYQLEMLEASRKENIIVAMDTGSGKTHMHVSSFTFCRHVFLTVFFSAILRIIDELENS 74
Query: 66 PSPFVAV-FLVPKVVLVPQQAEAIKMHT-DLKVGKYWGDMGVDFW-DGATWKEEMSKHEV 122
SP + FL P V L QQ E I +K G VD W D W + + V
Sbjct: 75 DSPDKLIWFLAPTVALSLQQHEVITSQILSVKTKILTGLDNVDRWTDQGIWDKVLKDIRV 134
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSNLP 181
+V T +L D L + +++ + +L+ DE HH +H IM YH LL +G + +P
Sbjct: 135 VVSTYAVLADALGHGFVRMSRLALLVFDEAHHCTKRHPANKIMQNHYHPTLLRSGPNAVP 194
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESV-----LSNFIPFSTAK 236
RI G+TASP+ V SS+ ++LET+ ++ C + V L N +
Sbjct: 195 RILGLTASPV---VRSSQ-------NELETIESNLNAICKTPRVHRTELLENTHRPHLER 244
Query: 237 FKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKK------VSKINS 290
+ +DE + + L L +IE ++E+ + E +R K + +
Sbjct: 245 VNYISFDEAHYGSGSRLL--LPLIECCRAYNIED----DPWVESLRSKDHTVELTKALTT 298
Query: 291 TLLYCLSELGVWLALKAA--ETISCYESDFFAWEQLDGFGETIIKKFGSDASQA------ 342
+C +L + A E + + DFF +D ++ DAS+
Sbjct: 299 GKTFCSEQLRNFQARSCHIYEELGGWAVDFFISASIDQLQRSM-----QDASEMSHLDQM 353
Query: 343 ---------LVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIF 393
L P AE +S ++ K+ L+ + LE ++F
Sbjct: 354 ERIYLLELLLAMPAPVSAE-----------ESNHVSVKLEMLL-NFLEKMDRPGFSGLLF 401
Query: 394 VERVITAIVLQSLLSELLPR-----HCTWKTKYIAGNNSGIQCQS----RKKQNEIVEEF 444
++ T VL +LS + P+ C + + N C R Q + ++EF
Sbjct: 402 AKQRATVSVLARILS-IHPKTRDRFQCAAYVGWSSDRNRK-GCLGDLLHRDMQRDTLDEF 459
Query: 445 RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
+ G N+IV T +LEEG+DV +C+LVI +D + SF+Q RGRAR + S Y LM+ + D
Sbjct: 460 KVGRKNLIVTTDVLEEGIDVSACSLVICYDKPANLKSFVQRRGRARHRESTYALMISNED 519
Query: 505 ---------STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIA 555
Q+ ++ Y + R+EV + + ++ VE T +
Sbjct: 520 ELLNLHKWQELEQAMIKAY-QDDERRRREVYDLEA-------TEEHVKERLWVEKTSALL 571
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE---MGICTLYLPNNC--PIQTVIAQGN 610
T ++ +Y +C+ LP D Y P F + + + T+ LPN+ ++ +
Sbjct: 572 TADDALQHLYHFCAVLPVDEYSNNLPLFSFQENSVGLLLGTVTLPNSVHPTVRRTTGKAW 631
Query: 611 IKTLKQA---ACLEACKKLHQIGALTDNLLP 638
+T + A +A K LH G + DNLLP
Sbjct: 632 WRTERAARKETAFQAYKALHAYGLVNDNLLP 662
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 196/451 (43%), Gaps = 61/451 (13%)
Query: 896 RRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
RR +Q + + + + K S+ LP C I P + F F+ +I+ RL++
Sbjct: 866 RRRNLLQMPATNIAEDGEADAPKKSYILPAAACVIDKLPAKQAVFG--LFISAILDRLEA 923
Query: 956 LLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQ 1014
L+A L + +L + V I I V+ AI+ Q + + E GDS LK+ S Q
Sbjct: 924 SLVAHRLNDTIL----KGVGIKDIAHVITAISAPIAQASTNYQRYEFFGDSVLKFTVSCQ 979
Query: 1015 LFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYE 1074
LF N HEG LS ++++I N+ L + + + F+ T F P+ W P
Sbjct: 980 LFFRNGNWHEGYLSESRDKLIQNSRLARAALDLGIDSFVLTSRFTPRKWTTP-------- 1031
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FV 1133
L + T ++ + +K +ADVVE+LIGA GG L R +++ F
Sbjct: 1032 -----LIRNKLEPSTAKRNISTKVLADVVESLIGAAYVDGGIREAQACLHRFLPEINLFT 1086
Query: 1134 N--VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
N P L+N L L+ Y+F DP+LL EALTH S + YQRLEF
Sbjct: 1087 NDISPLILPQGKGVSNLINHHRLAGLIGYTFNDPALLTEALTHASCEYDTSTQSYQRLEF 1146
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
LGDAVLD ++ + + G +T ++ + VN + A ++ H +
Sbjct: 1147 LGDAVLDMVVMAVIAGHPVEMDQGPMTLLKHSVVNANLLAFFCMELCAPDEPSHVTQFTN 1206
Query: 1252 KRINITVDSFEKLSL-----------------------------------GSTFGWESVT 1276
IN+ V ++++ L G+ + WE
Sbjct: 1207 GGINL-VPRYDQIHLWRFLRSHGPNIKSAQEACLERHQGLRAEIRDALENGTQYPWELFA 1265
Query: 1277 SF--PKALGDIIESLAGAIFVDSGCNREVVF 1305
K L DIIES+ GAIF+D G + +V +
Sbjct: 1266 RLRADKFLSDIIESVLGAIFIDCGGDLDVCY 1296
>gi|71051733|gb|AAH98796.1| Dicer1 protein [Rattus norvegicus]
Length = 401
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 173/372 (46%), Gaps = 81/372 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV D + P Q
Sbjct: 35 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQ 94
Query: 1145 ---------------------------------------AERLVN-----VRHLESLLNY 1160
AE+ +N + E +NY
Sbjct: 95 QKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINY 154
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 155 IFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 214
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES---- 1274
RSA VNN +A +VK+ HK+ S EL+ +D F + L G +S
Sbjct: 215 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQGMDSELRR 270
Query: 1275 ---------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P++ P+I +
Sbjct: 271 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPR 330
Query: 1324 HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
PVREL E + FS P GK VTVE+ G+ + + AK A
Sbjct: 331 SPVRELLEMEPETAKFS---PAERTYDGKVRVTVELVGKGKF---KGVGRSYRIAKSAAA 384
Query: 1383 KEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 385 RRALRSLKANQP 396
>gi|409050172|gb|EKM59649.1| hypothetical protein PHACADRAFT_114689 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1230
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 227/480 (47%), Gaps = 46/480 (9%)
Query: 888 DREPLLNGRRIFHVQNYLSKCRQQKQ--KEPSKISFELPPELCRIIMAPISLSTFYSFTF 945
+ +PL+ + V N L+ + K P+++ L PELC + P S+ + +
Sbjct: 674 ENQPLIEVSLVPPVANNLAPASKDTSTVKNPARL---LVPELCYKFVIPASI--WRTVLL 728
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+PSI H + +LL ++ + N +I + +A+T + E LE LGD+
Sbjct: 729 LPSITHMIDRMLLVKEMRVAVF-----NQSIGEGDLFQAVTPVSANVEKDYERLELLGDA 783
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW-- 1063
LK S F T EG LS + +++SN L + +P +I+++ K+W
Sbjct: 784 LLKDILSTYFFATMPTKREGALSSARGQVVSNKMLHQNAMAAGMPPWIQSKPLVVKLWTP 843
Query: 1064 -IIPGDNSGSYELNDDSLFNGRKIYVTGR--KKVKSKTVADVVEALIGAFLSTGGENVGL 1120
++ ++G ++D R+ + + + + KTVADVVEA++GA GG + L
Sbjct: 844 YLVARQDAGDVGTSNDHRRGKRQKQLEEQDVQWLGDKTVADVVEAVVGAAFHQGGTDNVL 903
Query: 1121 -------IFLDRIGIKVDF--VNVPYQRQFQVHAERLVNVRH-LESLLNYSFRDPSLLVE 1170
+ I DF V P + + V +E++ + F P++L E
Sbjct: 904 RTMKILQFNMPEIAEHSDFWRVYAPNAPSHKTFCDLPVGTSEAVEAITGFKFHTPAILAE 963
Query: 1171 ALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY 1230
ALTHGS + Y RLEFLGD +LD I Y++ YP LSPG L+ +++A V+N
Sbjct: 964 ALTHGSISNQHM-TSYDRLEFLGDGILDSNIVWYIFKAYPKLSPGGLSLLKAAMVSNLTL 1022
Query: 1231 ALSSVKHGLHKHILHASHELYKRINITV------------DSFEKLSLGSTFGWESVTSF 1278
A +V+ GL++H+ + S E+ + + V D+ + L + F W V +
Sbjct: 1023 AAVAVESGLYEHVRYCSKEIMSAVKLYVQKIFTLRDQEYRDAEAESRLPNQF-WLEVDA- 1080
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVV---FQSI-RPLLEPMITPETMRFHPVRELTEYCQ 1334
PK L D++E++ GAI+V + V FQ + RP + I T+ HP L E+ Q
Sbjct: 1081 PKPLADLVEAIVGAIYVSDRFGTQGVKTFFQKVLRPFYDRHIRLHTLAPHPGTSLFEFLQ 1140
>gi|326485005|gb|EGE09015.1| dicer-like protein 2 [Trichophyton equinum CBS 127.97]
Length = 1417
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 179/695 (25%), Positives = 297/695 (42%), Gaps = 87/695 (12%)
Query: 13 EVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAI------------------- 53
E + DTL +R YQ+E L+ ++KQN IV ++TGSGKT +++
Sbjct: 49 EDAPDTLR-SRGYQIEMLDASIKQNIIVAMDTGSGKTQMSVNYTHAETLSYDHLNNQASS 107
Query: 54 --------MLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYW-GDMG 104
+LR L R + + FL PKV L QQ AI K G
Sbjct: 108 NTVGHIYSAILRIRHELERCSNDKLVWFLAPKVPLAEQQYRAISQQLPAYQTKILTGADN 167
Query: 105 VDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYAC 163
++ W W + ++V TPQILLD L + L I +L+ DE HH
Sbjct: 168 LERWSTQKIWDAFLLNTRIVVSTPQILLDVLSNGFITLRRIALLVFDEAHHCVKASPENK 227
Query: 164 IMTEFYH----RLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNS--KV 217
IM FYH +L ET D LP I G+TASP SK++ + LE +++ K
Sbjct: 228 IMKNFYHARIDQLSETND--LPSILGLTASPT-SKLTEDSLSLLMESRQLEQNLHACCKT 284
Query: 218 YTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHT------------ 265
+ E ++ K + K IPH + L I+++
Sbjct: 285 PSFHREEMMQYVHIPELLKISYQKDSTIPHNMEMKFLSMLNDIDIESDPFFQRYKGKTDR 344
Query: 266 RSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFF--AWEQ 323
+S+E + ++ + + + + ELG W + S + S+ + E+
Sbjct: 345 KSIERFMRARDRKTPCLDQLKRCFTRVSHIYGELGHWAS-------STFISEIYRRTREK 397
Query: 324 LDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYR 383
+ ++ D S L + +I + +N +++K+ L++ LL
Sbjct: 398 RAKLIDQSWSEWDRDDSSFLCNALKPVV--AIIGERCWNSTPDAVSQKVEHLVD-LLASE 454
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG-------IQCQSRKK 436
R IIFVE+ TA++L L+S P Y GN++ +
Sbjct: 455 LTGTSRGIIFVEQRATAVMLSHLISHY-PELAHIMPDYFLGNSAFSDRKADITELSKPGD 513
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
+++ + G N++VATS+LEEG+DV +C+LV+ FDP + + SF+Q RGRAR Q+S +
Sbjct: 514 MKNSIDDLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKQSSKF 573
Query: 497 LLMVKSGDSTTQ---SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGT 553
++ D+ T +E+ + KE + + +ESTG
Sbjct: 574 VIFYAEDDTATHKDWEAMEDIMKERYFNNKEFIDRLREEDDEEDVEYES---LRIESTGA 630
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN----KEMGICTLYLPNNCPIQ-----T 604
+ TL ++ S + +CS LP + + P F I+ K+M + LP +Q
Sbjct: 631 LLTLENARSHLSHFCSTLPCE-FTDTQPDFIISNSGIKDMLTAKVLLPTVLDLQFREFEG 689
Query: 605 VIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPD 639
+ A K K+ A +A +L++ G + D+L+P+
Sbjct: 690 IQAWKREKMAKRDAAFQAYLQLYKAGLVNDHLMPE 724
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 201/423 (47%), Gaps = 70/423 (16%)
Query: 986 TTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGC 1045
++ +ED + + LE LGDS LK AS QL + HEG+LS KK+ I+SN+ L K
Sbjct: 971 SSTSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAV 1030
Query: 1046 EQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEA 1105
+ L FI T F W P NS + N KI +++ +KT+ADVVE+
Sbjct: 1031 DTGLDQFILTTCFTGAKW-RPLYNSTYAD-------NAGKIGEKSTRELSTKTLADVVES 1082
Query: 1106 LIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYQRQFQVHAERLVNVRHL 1154
LIGA + GGEN L +FL I I++ F + P F R + + +
Sbjct: 1083 LIGAAIIDGGENKVLRCLELFLPEINWQPSGERIEILFDSAP---DFNDDCPRDI-MSKI 1138
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
E L++YSF +LL +L+H S ++ + YQRLEFLGD++LD ++T L+ +
Sbjct: 1139 EPLIDYSFTKKALLATSLSHPSNLISRM--TYQRLEFLGDSILDNIVTRALFRCKKEIPH 1196
Query: 1215 GYLTDMRSASVNNDCYA------------------------LSSVKH--GLHKHILHASH 1248
+ +R+A VN D A ++S H L +++ H+S
Sbjct: 1197 QDMHLIRTALVNADFLAFLCMNTSTDVTREDVCVSPTGEVEVTSSTHQVSLWQYMSHSST 1256
Query: 1249 ELYKRINITVDSFEK--------LSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDS- 1297
++ + +FE+ L G+++ W S + PK DIIES+ GAIF+DS
Sbjct: 1257 DIVETQQAIARTFEELRDQIEKALRSGASYPWTLLSTLNAPKFFSDIIESILGAIFIDSR 1316
Query: 1298 ----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTEYCQKNHFSMKKPVASRISGKA 1352
C + + S+ L+ ++ + + F HP + L Q S+K V S + K
Sbjct: 1317 GSILACQKFLARISLMDYLQRVLEEDGIDFMHPKQRLGVVAQS--LSVKY-VVSEVHVKP 1373
Query: 1353 AVT 1355
VT
Sbjct: 1374 GVT 1376
>gi|378734261|gb|EHY60720.1| hypothetical protein HMPREF1120_08668 [Exophiala dermatitidis
NIH/UT8656]
Length = 1469
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 186/664 (28%), Positives = 298/664 (44%), Gaps = 77/664 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQ+E E+++K N I + TG+GKT +A LR A R P + F P VVL
Sbjct: 26 SRAYQIEMFEHSMKGNVIAVMGTGTGKTQVAK--LRIEAEFERSPIKRI-WFTAPSVVLA 82
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVD---FWDGA-TWKEEMSKHEVLVMTPQILLDGLRLS 137
QQ + L ++ G+D FWD W + + +V TP ILL L
Sbjct: 83 YQQYCFLSWQ--LPAFQFRLITGMDNAEFWDTQEVWDKALHNINGVVSTPAILLQALDGG 140
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG-DSNLPRIFGMTASPIKSKVS 196
+ + I +L++DE HH K IM YH + + LP I G++ASPI K
Sbjct: 141 FVSMKTISLLVVDEAHHCVAKSLVNTIMKVHYHPVKKANCPYELPHILGLSASPITKKSP 200
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPF-STAKFKFYKYDE--IPHA-LYTH 252
+ +I +LE ++++ T + L + F + + +DE P A L T
Sbjct: 201 A-------EITELEANLDAQCKTPLQQ--LEEYTAFVNMPEIVILTFDEEMTPDARLLTQ 251
Query: 253 LADELAMIELKHTRSLENLDLNEAQ--AELIRKKVSKINSTLLYCLSELGVWLALKAAET 310
L+ ++ + ++ L + Q AE +RK + K + + L+ L L++A T
Sbjct: 252 LSSLVSDLRFTDDPIMKKLQEKDDQKAAEKLRKIIHKGATPAMTELNTL-----LRSATT 306
Query: 311 ISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGA---------------EWSI 355
I + D W + + ++K A + G S+
Sbjct: 307 I---QQDLGRW-ACETYITACVRKLHCAVRNAAGLEIHPGLTHDNRPFMESTLRPLHASL 362
Query: 356 GDDSKFNLDSGL-LTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
G +L S L+ K+ L+ L EYR D+R +IFV TA L +++ P
Sbjct: 363 GAPGGGSLSSPEDLSAKVAILLNFLRKEYRS--DVRGLIFVHARHTAWALTEVINSH-PA 419
Query: 414 HCTWKT-KYIAGNNSGIQCQSRKKQNEI----VEEFRRGLVNVIVATSILEEGLDVQSCN 468
++ ++ +N Q Q I +E FRRG +N+ +ATS+LEEG+DV S N
Sbjct: 420 MSNYRAFSFVGVSNPAYQGAFDFAQLHIQFENLERFRRGQLNLCIATSVLEEGIDVPSMN 479
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS- 527
LVI FD + SF+QSRGRAR +NS Y+ + S + S+++++ A M+++ S
Sbjct: 480 LVISFDARPNLRSFVQSRGRARQRNSKYVELRSSLEP--YSKIKSFEAWEADMKRKCESS 537
Query: 528 ----HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT-PK 582
A L G + V STG T ++ + +CS+LP + +P P
Sbjct: 538 LRDLEARKVVESLKEE--GGSIFRVPSTGATLTFDNARQSLQRFCSKLPRNADSEPPEPI 595
Query: 583 FHINKEMGI---CTLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTD 634
F + E+G+ +YLP P + V +Q +T + A A A L++ G + +
Sbjct: 596 FCLEGEIGLRIFAKVYLPTCLPPHLHVVSSQLGWQTERMAKKDAAFHAYLGLYKAGLVNE 655
Query: 635 NLLP 638
NL P
Sbjct: 656 NLQP 659
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 40/308 (12%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQ-SLLLAVNLKNMLLDHCMQNVTIPTIKV 981
LP + C ++ P+ + VPSI H L+ L A + L + ++ + V
Sbjct: 889 LPVDQCVLLGVPVDYARL--MLLVPSITHMLEVCLRTAAACQGPLAGLPLVDMDL----V 942
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
EA+T + + E LE LGD LK+ S Q F E L++ + RI++NA L
Sbjct: 943 SEALTLPRVGPR-NYERLEFLGDDLLKFYTSIQGFVDNPTYPESGLTIARNRIVNNARLQ 1001
Query: 1042 KLGCEQKLPGFIRTESFDPKMWI--IPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
+ L F+ F W + ++ + + D++ +G K +++ SKT+
Sbjct: 1002 RATRTLALEQFLTQHRFSGAEWTAGVSKEDREGHGDSTDTVAHGEKTHLS------SKTL 1055
Query: 1100 ADVVEALIGAF------LSTGGENV------GLI-----FLDRI---GIKVDFVNVPYQR 1139
ADV+EALIGA +T G+N+ G+I FL+ + + + V +
Sbjct: 1056 ADVIEALIGAASLNGSTTTTNGDNIESRSQEGVIAALRLFLEEVPWRPVSENLVRIHVMD 1115
Query: 1140 QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
++ +L +ESL+ Y F +LL EALT S++ ++ Y RLEFLGDAVLD+
Sbjct: 1116 DSEITGYQLYAP--VESLIGYRFTRHALLAEALTQ-SWLGGQV-SSYDRLEFLGDAVLDH 1171
Query: 1200 LITVYLYN 1207
++ L++
Sbjct: 1172 IVKQALFH 1179
>gi|296417821|ref|XP_002838549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634492|emb|CAZ82740.1| unnamed protein product [Tuber melanosporum]
Length = 1490
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 174/660 (26%), Positives = 282/660 (42%), Gaps = 114/660 (17%)
Query: 69 FVAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEM----SKHEV 122
++ FLVP V L QQ E +K + + G VD W D W E + + H V
Sbjct: 12 LLSWFLVPNVSLGNQQYEVLKASLPPVNIQFLSGGDKVDKWSDQEIWDEILGIKDNDHAV 71
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
+V T Q+LLD L + ++ I +++ DE HH G+H IM EFYH + G +P
Sbjct: 72 VVSTHQVLLDALTHGFVRMEGIGLIVFDEAHHCVGQHPANRIMQEFYHPRVRKG-LEVPA 130
Query: 183 IFGMTASPIKSKVSSSEQDY-----------WQKIHDLETLMN--SKVYTCASESVLSNF 229
+ G+TASP+ + W + +ET +N S+ E +L +
Sbjct: 131 VLGLTASPVVKSTPDQLRHVSPKFWIGVLANWVYVRVIETNLNAISRTPVRNREELLRHV 190
Query: 230 IPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLD-LNEAQAELIRKKVSKI 288
P + + D +P AL + L A ++++ ++ L N I +SK
Sbjct: 191 HPPVLKRIQGVATDNVPSALDS-LQLAWATMDIRQDPYIKALQSANPPDLGRIETTISKR 249
Query: 289 NSTLLYC--------------LSELGVWLALKAAETISCY------ESDFFAWEQLDGFG 328
N+ YC E G W ++ CY ++ FA E+
Sbjct: 250 NT---YCQVQMRGLLNKAFHLRKEFGAW-------SVDCYLKHAIQKAIKFADEE---DP 296
Query: 329 ETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI 388
E++ ++ ++ + L + + I G L++K+ LIE LL +
Sbjct: 297 ESMWMEWNNEEKRYLKSILSK-----IAVPRDIGPIEGRLSDKVEKLIEVLLGEHKDDGG 351
Query: 389 R--CIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI------------QCQSR 434
+ +IFVE+ + S+L+E+L K + G G+ + +
Sbjct: 352 KFAGLIFVEQRVGV----SILAEILKTDSRTKDIFRVGTVVGVSEGNGRTRKAIYELVNL 407
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
K Q E +E+FR G N++V+TS++EEG+D+ +C LV+ F + SFIQ RGRARM S
Sbjct: 408 KGQYETIEDFRAGKKNLVVSTSVVEEGMDIPACRLVVCFSLPPNLKSFIQRRGRARMAKS 467
Query: 495 DYLLMVKSGDSTTQ---------SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF 545
+Y+LM GD+ + +E YL K+ E + P +
Sbjct: 468 NYVLMFNEGDTQGKIDKFKQLEMDMIEEYLDETRKLEAETKTETEDPDEDSILNKGRNRR 527
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH---INKE-------MG----- 590
+ +ESTG + TL S+VS ++ +C+ LP Y P FH +N+E MG
Sbjct: 528 FQIESTGALLTLDSAVSHLHHFCNCLPRGEYMDLRPIFHTWIVNQEQLDTLKAMGSGLSA 587
Query: 591 ----ICTLYLPNNCPIQTVIAQ-----GNIKTLKQAACLEACKKLHQIGA---LTDNLLP 638
+ + LPN + A+ G K K+ A EA L Q+ + D+L+P
Sbjct: 588 RPLYMAEVLLPNCIAPEVRRARSREAWGTEKWAKRDAAFEAYLALRQLQGDPLIDDHLMP 647
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 220/471 (46%), Gaps = 73/471 (15%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL 982
L PELC + + P S F ++P I+ R++ +A +L+ LL H + +IP K++
Sbjct: 884 LIPELCTVDVVPWKYSQFA--MYLPGIIRRIEMSFIAADLERTLL-HPVGFNSIP--KMV 938
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
A++ +E + E LGDS LK+ S L + HEG L+ KKE++++N+ L +
Sbjct: 939 TALSASSARESTDYQRFEFLGDSVLKFLTSVNLLDEHPFWHEGYLTRKKEQMVANSRLAR 998
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
+ +L +I T+ F W Y ++++ F +K G K++ +K +ADV
Sbjct: 999 AAIDNRLAKWIITDIFTGSKW------RPRYVISEEEEFPEKK--RKGPKQLSTKILADV 1050
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQ---------RQFQVHAERLVNVRH 1153
VEALIGA G L + G+ +++ ++ + R +VH L +++
Sbjct: 1051 VEALIGAAYLEGNYPKALKVIRAFGLNINWKSLEERTTSLLNRASRYPEVH---LSHLKG 1107
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LESL+ Y F +LL+EA+TH S+ YQR+EFLGDA+LD ++ +L+ LS
Sbjct: 1108 LESLIGYHFTHKALLLEAITHPSWESDMTSLSYQRMEFLGDALLDMVVVNHLFFSPRNLS 1167
Query: 1214 PGYLTDMRSASVNND--------C------YALSSVKHGLHKHILHASH--ELYKRI--- 1254
+ +S+ VN + C Y +S I++ S EL+K I
Sbjct: 1168 HIDMHLYKSSVVNGNFLAYLSLRCAVDAKYYGISQRAQSTEVEIVNKSRKVELWKFIRHQ 1227
Query: 1255 --------NITVDSFEK---------LSLGSTFGWESVTSFP-------KALGDIIESLA 1290
I +E+ L G + W ++ K L D++E++
Sbjct: 1228 HQQIQHAQKICSKRYEEDLRDSVQAALDYGKDYPWTELSPLESDKSGRNKFLSDVVEAII 1287
Query: 1291 GAIFVDSGCNREVVFQ-----SIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
GA+F+DSG + E V I +L+ ++ HPV++L E N
Sbjct: 1288 GAVFIDSGGDFETVQSLAERLGILKVLKRLVADHVDVTHPVKKLGEAVAAN 1338
>gi|392593064|gb|EIW82390.1| ribonuclease III [Coniophora puteana RWD-64-598 SS2]
Length = 1217
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 261/559 (46%), Gaps = 74/559 (13%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
+PL+ ++ ++ N L+ + + + L PEL P ++ + +PS+
Sbjct: 640 QPLIQVSKVPNLSNLLNPLKTAAEVGKPTARY-LIPELTAKYTIPANV--YRMALLLPSV 696
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKY 1009
R+ ++L+A L ML +H I +L A++ F E LE LGD+FLKY
Sbjct: 697 TQRIDNILIAKELNAMLFEH-----QITEGLLLSALSAPSALYAFDYERLELLGDAFLKY 751
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDN 1069
S +F Y + EG L ++++ SN AL + +LP +I+ + K+W+
Sbjct: 752 ITSIYVFVIYPAHAEGSLHNLRQKMTSNKALLQNALAIELPPYIQGKPLSLKLWL----- 806
Query: 1070 SGSYELN------------------DDSLFNGRK----IYVTGRKKVK------------ 1095
+Y L+ D ++ + R +KKV+
Sbjct: 807 PTNYTLDKCPPIAHQRHDEHAASAVDTTVVDTRPHPDTTQARTKKKVRKQNQDQVTQWLG 866
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN--VPYQRQFQVHAERLV---- 1149
KT+ADVVEA+IGA +GG +V L + + I ++ V + R+ R+
Sbjct: 867 DKTIADVVEAIIGAAYLSGGCDVALRVMKALTIPLNSVEQWSDFGRKVLTPPPRVSAALP 926
Query: 1150 --NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++ +E L+ + P LL +ALTHGS + YQRLEFLGDA+LD+++ ++Y+
Sbjct: 927 PRSLEFVEKLVRRKVKYPHLLAQALTHGSIQGYDA-TTYQRLEFLGDAILDFMVVRHIYH 985
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL---YKRINITVDSFEK- 1263
+ LSPG +T ++SA V N A V GL++H+L +E+ +K+ + + E+
Sbjct: 986 RDESLSPGVMTILKSAMVANSALAAICVWSGLNEHLLVDDYEVSESFKKYARDLKAKEQE 1045
Query: 1264 -----LSLGSTFG--WESVTSFPKALGDIIESLAGAIFVDSG---CNREVVFQSI-RPLL 1312
L G+ G W +T PKAL D++ES+ GA+++ G + E+ F + P
Sbjct: 1046 VRTASLRDGTPIGQFWLHITP-PKALSDVVESIIGALYISDGFEPLSIEIFFDEVLMPFY 1104
Query: 1313 EPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDA 1372
+ IT +T+ HP + L + Q + + + G+ +V +G L D
Sbjct: 1105 DQYITLKTITEHPAKILFDLLQAHGCQEYELDKGKGDGQFKF-CKVVVHGTLVAEATSDT 1163
Query: 1373 DKKTAKKVACKEVLKSLRA 1391
+ A+++AC E L +L
Sbjct: 1164 -QSAARRLACMETLDALEG 1181
>gi|94957752|ref|NP_001035555.1| endoribonuclease Dicer [Gallus gallus]
gi|257051054|sp|Q25BN1.3|DICER_CHICK RecName: Full=Endoribonuclease Dicer
gi|90074858|dbj|BAE87103.1| Dicer protein [Gallus gallus]
Length = 1921
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 176/374 (47%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 1132
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSE 1612
Query: 1133 ----------------------------VNVPYQRQF-QVHAERLVN-----VRHLESLL 1158
+ +P + F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1849 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1902
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y + W W +E SKH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCH 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L LR Y L+ I +L+ DECH A H Y IM ++ E S PRI G+TA
Sbjct: 154 VALTVLRNEYLSLSNINLLVFDECHLAIQDHPYREIM-----KICEDYPS-CPRILGLTA 207
Query: 189 SPIKSK 194
S + K
Sbjct: 208 SILNGK 213
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 25/276 (9%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR-------- 434
+I C IIFVER TA+VL L+ E P + +I G+ G + Q R
Sbjct: 440 NILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEF 498
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S
Sbjct: 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPIS 558
Query: 495 DYLLMVKSGD-STTQSRLENYLASGNKMRKEV---LSHASLPCSPL--NNHMYGEDFYHV 548
+Y+++ + + + L+ Y A +R + + + P+ ++ ++
Sbjct: 559 NYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDDVFPPYVLRT 618
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGICTLYLPNNCPIQTV 605
+ T+++++ I YC+RLPSD + PK + TLYLP N P++
Sbjct: 619 DENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPLRAS 678
Query: 606 IAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
I + + A L C+KLH+IG L D+L+P
Sbjct: 679 IVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|367035818|ref|XP_003667191.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
gi|347014464|gb|AEO61946.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
Length = 1475
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 180/673 (26%), Positives = 297/673 (44%), Gaps = 92/673 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQLE LE +LK+N IV ++TGSGKT +AIM R A L R +A FL P V L
Sbjct: 81 ARAYQLEMLEESLKKNVIVAMDTGSGKTQVAIM--RIQAELERGDK--IAWFLAPTVSLA 136
Query: 82 PQQAEAIKMH-TDLKVGKYWGDMGVDFWDG--ATWKEEMSKHEVLVMTPQILLDGLRLSY 138
QQ E I+ ++ G V+ W W + ++V T QIL D + +
Sbjct: 137 EQQFETIRAQIPGVQSRLILGSDNVEAWSSKPGVWDAVLFNTRIIVSTYQILFDAVTHAL 196
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
L + ++++DE HH++G + A +M E Y G +P I G+TASP+ +
Sbjct: 197 VPLASLGIIVVDEAHHSKGNNPVARLMREHYVPNKARG-LPVPHILGLTASPLMTS---- 251
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL- 257
++DLE L + C + S + A+ + I + L D
Sbjct: 252 ------NLNDLEVLERTLDAVCKTPSKHREEL---MAQVNHPEMKTISYGGAASLDDAAQ 302
Query: 258 ---AMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
AM+ L++T L+L+ Q +R ++ + L ++ L ET S
Sbjct: 303 PTPAMLRLRNT----CLELDIRQDPFVRHLLTDNTARGRETLKKV-----LLTKETYSRS 353
Query: 315 ESDFF---AWEQLDGFGE--------TIIKKF--GSDASQALVTYVPSGAEWSIGDDSKF 361
+ + F AWE FG +I F GSD + EW+ ++
Sbjct: 354 QMETFCRRAWEVWKTFGPWAADYYIYRVISSFLRGSDNPPSQEGDSLGDQEWAYLAEAFR 413
Query: 362 NLDSGL-------LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRH 414
LD+ L+ K+ L+++L + G I I ER A+ LS +L H
Sbjct: 414 KLDAQPPPETPTELSPKVHALLDALESHEG-NPIGIIFVKERASVAV-----LSHILAVH 467
Query: 415 CTWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFRRGLVNVIVATSILEEGLDV 464
+Y G+ G ++++ + ++ FR+G +N++VATS+LEEG+DV
Sbjct: 468 PKTSRRYRVGSMVGTSRVPGRRRDILDLSQKDYLLALQAFRKGAINLLVATSVLEEGIDV 527
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK- 523
+CNLVI FD + SFIQ RGRARM S L+V+ + + +N G RK
Sbjct: 528 PACNLVICFDKLDNLKSFIQRRGRARMSASHLYLLVEDESDPSSRQWQNL--EGEMKRKY 585
Query: 524 --EVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
++ + L ++ + E+ I L + L +F C+ L + Y +P
Sbjct: 586 EDDMRENKRLEQIEDSDDLDYPILRDRETGAQITILDAKAHLEHF-CATLSTRKYVDWSP 644
Query: 582 KFHIN---------KEMGI--CTLYLPNNCP-----IQTVIAQGNIKTLKQAACLEACKK 625
+ ++ ++ G+ T++LP + +++ A + + A +A K
Sbjct: 645 FYVVHDLEGNPVDARQPGLRKATVHLPVSLAPELRTFESLHAWRSEAKACRDAAFQAYAK 704
Query: 626 LHQIGALTDNLLP 638
L+++G + N+LP
Sbjct: 705 LYEVGLVNRNMLP 717
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 26/305 (8%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTK---KCQEDFHLESLET 1001
F+P+I L+ L+A +L LD ++ I + ++ A + + D+ E +E
Sbjct: 969 FIPAITRALEVHLVAKDL----LDTRLEPTGITDLSLVVAAISASAARGPTDY--ERVEF 1022
Query: 1002 LGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPK 1061
LGD+ LK+ + Y + EG LS K++I+SN+ L + L +I ++F
Sbjct: 1023 LGDAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLDRYIIHKTFTMH 1082
Query: 1062 MWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLI 1121
W +Y +D L N T +++ +KT+ADVVEALIGA +GG L
Sbjct: 1083 KW------RPAY--VEDLLENPPS--ETETRRLSTKTLADVVEALIGASYISGGTPKALA 1132
Query: 1122 FLDRIGIKVDFVNVPYQRQFQVHA----ERL-VNVRHLESLLNYSFRDPSLLVEALTHGS 1176
+ + ++ ++ + R+ + E L +R LESLL Y+F SLLVEA+TH S
Sbjct: 1133 CMSLFLPEFEWHSIEHCREVLYNQAPDDEPLPATMRSLESLLGYTFTKRSLLVEAMTHPS 1192
Query: 1177 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYN-KYP-GLSPGYLTDMRSASVNNDCYALSS 1234
P I RLEFLGDA+LDY++ L++ P L L +R+ VN D A +
Sbjct: 1193 CNGPNIRASLDRLEFLGDAILDYIVVKALFDMSTPTPLENSTLHLLRTTLVNADILAFLA 1252
Query: 1235 VKHGL 1239
++ +
Sbjct: 1253 LEWAI 1257
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
P Y+R+EFLGDA+L + V YP G+L+ ++ V+N ++V GL ++
Sbjct: 1014 PTDYERVEFLGDAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLDRY 1073
Query: 1243 ILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNRE 1302
I+H + ++K V+ + T E+ K L D++E+L GA ++ G +
Sbjct: 1074 IIHKTFTMHKWRPAYVEDLLENPPSET---ETRRLSTKTLADVVEALIGASYISGGTPKA 1130
Query: 1303 VVFQSI 1308
+ S+
Sbjct: 1131 LACMSL 1136
>gi|195143531|ref|XP_002012751.1| GL23778 [Drosophila persimilis]
gi|194101694|gb|EDW23737.1| GL23778 [Drosophila persimilis]
Length = 2278
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 196/433 (45%), Gaps = 94/433 (21%)
Query: 1026 LLSVKKERIISNAALCKLGCEQK----LPGFIRTESFDPKMWIIPGDNSGSYELNDDSLF 1081
LL +K +S+ +C++ E+ LPG E P+ +P D S ND S F
Sbjct: 1863 LLDIKN---LSSVQICEMVREKAEALGLPG--SAEQATPQATTVPLDESND-SCNDFSCF 1916
Query: 1082 NGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ- 1140
+ + + K++AD VEALIGA+L G L+F+ +G++V +PY RQ
Sbjct: 1917 IPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPYSRQP 1970
Query: 1141 ------------------------------------FQVHAER-----LVNVRHLESLLN 1159
+ +AER L E+ L
Sbjct: 1971 APASDSERTPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHLLSGFEEFEASLG 2030
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD
Sbjct: 2031 YRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2090
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV---- 1275
+RSA VNN +A +V+HG HK H S L N +D F ++ +
Sbjct: 2091 LRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLL 2146
Query: 1276 ----------TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKALGD+ ES+AGAIF+DS + +VV+ + M++PE +F
Sbjct: 2147 SEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSN 2202
Query: 1324 ----HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTA 1377
P+REL E + KP + VTV+V G TF + + + A
Sbjct: 2203 SVPKSPIRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIA 2256
Query: 1378 KKVACKEVLKSLR 1390
K A K L+ L+
Sbjct: 2257 KCTAAKCALRQLK 2269
Score = 73.6 bits (179), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS 433
++ G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 496 QHDGGDTLCALIYCNQNHTARVLFELLAEMGKRDADLKFLRCQYTTDRVADPTTEPKEAE 555
Query: 434 --RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR
Sbjct: 556 LEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARA 615
Query: 492 QNSDYLLMV 500
+ ++++V
Sbjct: 616 APAYHVILV 624
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N L
Sbjct: 1750 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNL 1809
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++L ++ F+P W+ P
Sbjct: 1810 YRLGRRKRLGEYMIATKFEPHDNWLPP 1836
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V +
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRGRRHGK-VSVYLSCQVGIDK 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ A M H TDL+V + DM F W + + V ++ P+ L L
Sbjct: 77 EPASIYTMLTHLTDLRVWQEQPDMQTPF--AHNWMD----YHVSILRPEGFLCLLVSGEL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L +++++L++CH + Y I+ F +L ++ PRI G+ A P+ S
Sbjct: 131 PLTSVELIVLEDCHDSA---VYQRILPIFLDHILPARPADRPRILGL-AGPLHS 180
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG LS++++L+ YC+RLPSD + K T + ++ G+ TL LP N P++
Sbjct: 829 TGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCAQSERSGVTLYQYTLRLPINSPLKH 888
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 889 DIVGLPMTTQTLARRLAALQACVELHKIGELDDQLQP 925
>gi|125773725|ref|XP_001358121.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
gi|54637856|gb|EAL27258.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
Length = 2280
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 196/433 (45%), Gaps = 94/433 (21%)
Query: 1026 LLSVKKERIISNAALCKLGCEQK----LPGFIRTESFDPKMWIIPGDNSGSYELNDDSLF 1081
LL +K +S+ +C++ E+ LPG E P+ +P D S ND S F
Sbjct: 1865 LLDIKN---LSSVQICEMVREKAEALGLPG--SAEQATPQATTVPLDESND-SCNDFSCF 1918
Query: 1082 NGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ- 1140
+ + + K++AD VEALIGA+L G L+F+ +G++V +PY RQ
Sbjct: 1919 IPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPYSRQP 1972
Query: 1141 ------------------------------------FQVHAER-----LVNVRHLESLLN 1159
+ +AER L E+ L
Sbjct: 1973 APASDSERTPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHLLSGFEEFEASLG 2032
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD
Sbjct: 2033 YRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2092
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV---- 1275
+RSA VNN +A +V+HG HK H S L N +D F ++ +
Sbjct: 2093 LRSALVNNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLL 2148
Query: 1276 ----------TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKALGD+ ES+AGAIF+DS + +VV+ + M++PE +F
Sbjct: 2149 SEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSN 2204
Query: 1324 ----HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTA 1377
P+REL E + KP + VTV+V G TF + + + A
Sbjct: 2205 SVPKSPIRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIA 2258
Query: 1378 KKVACKEVLKSLR 1390
K A K L+ L+
Sbjct: 2259 KCTAAKCALRQLK 2271
Score = 73.6 bits (179), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS 433
++ G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 498 QHDGGDTLCALIYCNQNHTARVLFELLAEMGKRDADLKFLRCQYTTDRVADPTTEPKEAE 557
Query: 434 --RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR
Sbjct: 558 LEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARA 617
Query: 492 QNSDYLLMV 500
+ ++++V
Sbjct: 618 APAYHVILV 626
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++N L
Sbjct: 1752 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNL 1811
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++L ++ F+P W+ P
Sbjct: 1812 YRLGRRKRLGEYMIATKFEPHDNWLPP 1838
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V +
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRGRRHGK-VSVYLSCQVGIDK 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ A M H TDL+V + DM F W + + V ++ P+ L L
Sbjct: 77 EPASIYTMLTHLTDLRVWQEQPDMQTPF--AHNWMD----YHVSILRPEGFLCLLVSGEL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L +++++L++CH + Y I+ F +L ++ PRI G+ A P+ S
Sbjct: 131 PLTSVELIVLEDCHDSA---VYQRILPIFLDHILPARPADRPRILGL-AGPLHS 180
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG LS++++L+ YC+RLPSD + K T + ++ G+ TL LP N P++
Sbjct: 831 TGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCAQSERSGVTLYQYTLRLPINSPLKH 890
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 891 DIVGLPMTTQTLARRLAALQACVELHKIGELDDQLQP 927
>gi|326920976|ref|XP_003206741.1| PREDICTED: endoribonuclease Dicer-like [Meleagris gallopavo]
Length = 1921
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 176/374 (47%), Gaps = 83/374 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-------KVDF-------------- 1132
+ K++AD VEAL+G +L++ GE +FL +G+ K D+
Sbjct: 1553 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKSDWESTLCPTGENCNSE 1612
Query: 1133 ----------------------------VNVPYQRQF-QVHAERLVN-----VRHLESLL 1158
+ +P + F AE+ +N + E +
Sbjct: 1613 QKNLSPNSVSACIVNSEPFLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKI 1672
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NYSF++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1673 NYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1732
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES-- 1274
D+RSA VNN +A +VK+ HK+ S EL+ +D F + + G +S
Sbjct: 1733 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQMEKNEMQGMDSEL 1788
Query: 1275 -----------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I +
Sbjct: 1789 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1848
Query: 1324 --HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
PVREL E + FS P GK VTVEV G+ + + AK
Sbjct: 1849 PRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSA 1902
Query: 1381 ACKEVLKSLRASFP 1394
A + L+SL+A+ P
Sbjct: 1903 AARRALRSLKANQP 1916
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R +
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
VFLV V QQ A++ H+DLKVG+Y + W W +E SKH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCH 153
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ L LR Y L+ I +L+ DECH A H Y IM ++ E S PRI G+TA
Sbjct: 154 VALTVLRNGYLSLSNINLLVFDECHLAIQDHPYREIM-----KICEDYPS-CPRILGLTA 207
Query: 189 SPIKSK 194
S + K
Sbjct: 208 SILNGK 213
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 141/279 (50%), Gaps = 31/279 (11%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR-------- 434
+I C IIFVER TA+VL L+ E P + +I G+ G + Q R
Sbjct: 440 NILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEF 498
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S
Sbjct: 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPIS 558
Query: 495 DYLLMVKSG-------DSTTQSRLENYLASGNKMRKEVLSHASLPCSPL--NNHMYGEDF 545
+Y+++ + D T +E L NK K V ++ + P+ ++ ++
Sbjct: 559 NYIMLADTDKIKSFEEDLKTYKAIEKILR--NKCSKSVDTN-EMETEPIVDDDDVFPPYV 615
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGICTLYLPNNCPI 602
+ T+++++ I YC+RLPSD + PK + TLYLP N P+
Sbjct: 616 LRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPL 675
Query: 603 QTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
+ I + + A L C+KLH+IG L D+L+P
Sbjct: 676 RASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP 714
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 1385
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|74204500|dbj|BAE23515.1| unnamed protein product [Mus musculus]
Length = 514
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 173/372 (46%), Gaps = 81/372 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 148 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 207
Query: 1128 ---------------------IKVDFVNVPYQRQF-QVHAERLVN-----VRHLESLLNY 1160
++ + +P + F AE+ +N E +NY
Sbjct: 208 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 267
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 268 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 327
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES---- 1274
RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 328 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 383
Query: 1275 ---------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 384 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 443
Query: 1324 HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 444 SPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAA 497
Query: 1383 KEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 498 RRALRSLKANQP 509
>gi|393220706|gb|EJD06192.1| hypothetical protein FOMMEDRAFT_145449 [Fomitiporia mediterranea
MF3/22]
Length = 1473
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 229/489 (46%), Gaps = 37/489 (7%)
Query: 917 SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI 976
S +F LP CR A + +F S R+ + A +N L + I
Sbjct: 906 SMATFLLPESYCR--RALFHMDIVEAFQVFASACQRVCDVFRARVARNFL-----KYPPI 958
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P ++EA+T F+ + LET+GDS LK + +F + N HEG L+ KE +S
Sbjct: 959 PDNLIVEALTLPSAMAGFNNQRLETMGDSVLKLSVVVYIFNAFPNRHEGQLTALKENSVS 1018
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L E L F+ +E+ + W + S L + G + +
Sbjct: 1019 NRLLLARAKEVHLERFLTSENRSMRTWRF--ERSSVTSLGTCKI--GSEEIALAHRTFPR 1074
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQV--HAERLVNVRHL 1154
+++ D +EA +GA GG N L +G+ P+ ++ + L
Sbjct: 1075 RSLQDCMEASLGAAYVAGGLNFALQTGTALGLCFGG-PTPWPERYPLTEFVPPAALFGKL 1133
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
+ L Y+FR+ LLVEA+ H S+ E CYQRLEFLGDAV++ ++T YLYNK+PG +
Sbjct: 1134 QEDLQYTFRNGKLLVEAVKHPSFDFLENYPCYQRLEFLGDAVIELVVTTYLYNKFPGANS 1193
Query: 1215 GYLTDMRSASV-NNDCYALSSVKHGLHKHIL----HASHELYKRINI-TVDSFEKLSLGS 1268
G ++ R+ ++ N AL+ + LHK++L S ++ K + I + S+E +SL
Sbjct: 1194 GQMSWARARAICNTTLAALAVNRLSLHKYLLANCVELSEDVAKEVEILSAASYEDVSLND 1253
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT---PETMRFHP 1325
W PK LGDI ES+ GA+FVDSG + + I L++ ++ P+ + + P
Sbjct: 1254 ---WR--YDPPKVLGDIFESVIGAVFVDSGFDYTITAPIIEELMKDVLVLLHPD-IPYDP 1307
Query: 1326 VRELTEY-----CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
V L ++ C + F + R++ K V V + + R+ A+K AK +
Sbjct: 1308 VSRLLQWVAKSGCMRAKFQ-RTQTNPRVNRKDGVVVLI--HDRIVAGPITAANKPLAKGL 1364
Query: 1381 ACKEVLKSL 1389
++ ++ L
Sbjct: 1365 VAEKAMQVL 1373
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 107/195 (54%), Gaps = 18/195 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF--VAVFLVPKVVL 80
R YQ E E A N I L+TGSGKT IA +L++ +++ +PS VFLVPKV L
Sbjct: 13 RAYQEEIFEQAQNGNVIAALDTGSGKTFIAALLIK---WVMSQPSQAGKKTVFLVPKVPL 69
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQ + + T L V Y G MGVD WD W+ E + + LVMT QI + L Y+
Sbjct: 70 VDQQRDVLSKQTPLIVRGYVGAMGVDAWDKGRWELEFLQSDCLVMTAQIFKNILVHGYWS 129
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
L+ + +LI DECHHAR H Y IM + Y P+IFGMTASPI ++
Sbjct: 130 LDQVALLIFDECHHARKYHPYNAIMVDHYR-----SSEWKPKIFGMTASPIWNRE----- 179
Query: 201 DYWQKIHDLETLMNS 215
+ + +ETL N+
Sbjct: 180 ---KPLESIETLQNN 191
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 166/353 (47%), Gaps = 30/353 (8%)
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS 427
L+ K+ ++ L+++R E + IIFV + A L +L +L + + G+
Sbjct: 352 LSPKLRAAVDILVKHRS-ESFQGIIFVNQRQVAKALSWILGRVLETKTWLRCGELIGHGE 410
Query: 428 GIQCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
+ S K+Q +IV+ FR G +N+++AT + EEGLD +C LVI +D + +
Sbjct: 411 SSKSSSSGKGMDIKRQRDIVQSFRSGNLNLLIATDVGEEGLDFPACALVIRYDSVKHMVG 470
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS-HASLPCSPLNN-- 538
++QSRGRAR QNS Y++M D+ +R + + ++R + +A L+N
Sbjct: 471 YVQSRGRARQQNSTYVVMAAENDAQEIARYKGLRNAEPELRIVYQTMNAGGSSGELDNGD 530
Query: 539 ----------HMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP-TPKFHI-- 585
+ + Y + STG T SS++SL+ +CS +P D Y + PK+ I
Sbjct: 531 ELDNDYVDPLDLASRETYTIPSTGATLTYSSAISLLSHFCSLIPGDSYTRSLQPKYIIES 590
Query: 586 -NKEMGICTLYLPNNCPIQT--VIAQG----NIKTLKQAACLEACKKLHQIGALTDNLLP 638
+K TL+LP P+ + ++ G + K K+A A + LH +G D L P
Sbjct: 591 ADKTEFTATLHLPRALPLTSDQLLYNGPPKRSKKEAKRAVAFIAMRMLHTLGIFDDYLSP 650
Query: 639 DIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFN 691
+ + P + + +++ SP T +H +++ + F+
Sbjct: 651 IKSRKGMSIEDADGRPIAKVNAVGVMMDVLVASPWSTGPPWHLHVLRINDKFH 703
>gi|37360146|dbj|BAC98051.1| mKIAA0928 protein [Mus musculus]
Length = 1475
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 173/372 (46%), Gaps = 81/372 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIG-------------------------- 1127
+ K++AD VEAL+G +L++ GE +FL +G
Sbjct: 1109 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQ 1168
Query: 1128 ---------------------IKVDFVNVPYQRQF-QVHAERLVN-----VRHLESLLNY 1160
++ + +P + F AE+ +N E +NY
Sbjct: 1169 QKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINY 1228
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LTD+
Sbjct: 1229 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1288
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWES---- 1274
RSA VNN +A +VK+ HK+ S EL+ +D F K L G +S
Sbjct: 1289 RSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQGMDSELRR 1344
Query: 1275 ---------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF-- 1323
PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I +
Sbjct: 1345 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPR 1404
Query: 1324 HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
PVREL E + FS P GK VTVEV G+ + + AK A
Sbjct: 1405 SPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAA 1458
Query: 1383 KEVLKSLRASFP 1394
+ L+SL+A+ P
Sbjct: 1459 RRALRSLKANQP 1470
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 118/217 (54%), Gaps = 14/217 (6%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E++ +FR N+++ATS++EEG+D+ CNLV+ FD S++QS+GRAR S
Sbjct: 58 RKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPIS 117
Query: 495 DYLLMVKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY-----HV 548
+Y+++ + + + L+ Y A +R + A + ++ + ED +
Sbjct: 118 NYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVLRP 177
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG----ICTLYLPNNCPIQT 604
+ G T+++++ I YC+RLPSD + PK +E+ TLYLP N P++
Sbjct: 178 DDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELPDGTFYSTLYLPINSPLRA 236
Query: 605 VI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
I +++ ++ L C+KLH+IG L ++L+P
Sbjct: 237 SIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP 273
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 856 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 915
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG-----DNSGSYELNDDSL 1080
+LG ++ LP + FDP + W+ PG D S S + D +
Sbjct: 916 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEM 961
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 1158 LNYSFR----DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+ YS R +P L+++ALT + L +RLE LGD+ L + IT YL+ Y
Sbjct: 842 VGYSSRTLGPNPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTY 894
Query: 1210 PGLSPGYLTDMRSASVNN 1227
P G L+ MRS V+N
Sbjct: 895 PDAHEGRLSYMRSKKVSN 912
>gi|302661784|ref|XP_003022555.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
gi|291186507|gb|EFE41937.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
Length = 1468
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 184/699 (26%), Positives = 303/699 (43%), Gaps = 116/699 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E LE ++KQN IV ++TGSGKT IAI+ +R L R + + FL P+V L
Sbjct: 58 RGYQREMLEASIKQNIIVAMDTGSGKTQIAILRIRH--ELERCSNDKLVWFLAPRVPLAE 115
Query: 83 QQAEAIKMHTDLKVGKYW-GDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ AI K G ++ W W + ++V TPQILLD L +
Sbjct: 116 QQYRAISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFIT 175
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYH----RLLETGDSNLPRIFGMTASPIKSKVS 196
L I +L+ DE HH IM FYH +L ET D LP I G+TASP +
Sbjct: 176 LRRIALLVFDEAHHCVKASPENKIMRNFYHARIDQLSETND--LPSILGLTASPTSKLIE 233
Query: 197 SS-----EQDYWQKIHDLETLMNSKVYTCA---SESVLSNFIPFSTAKFKFYKYDEIPHA 248
S E + LE +++ T A E + IP K + K IPH
Sbjct: 234 DSLSRQCECSLLMESRQLEQNLDAFCKTPAIHREEMMQYVHIP-ELRKISYQKDSIIPHN 292
Query: 249 L---YTHLADELAM------------IELKHT-RSLENLDLNEAQAELIRKKVSKINSTL 292
+ + H+ D++ + + K T R L L + +++ +K++
Sbjct: 293 MKVKFLHMLDDIDIESDPFFQRYKGKTDSKSTERFLRALARKTPGLDQLKRCFTKVS--- 349
Query: 293 LYCLSELGVWLA---------LKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQAL 343
+ ELG W + E + + W++ D F +A + +
Sbjct: 350 -HMYGELGHWASSAFISEIYRRTREERAKLVDHSWSEWDRDDS-------SFMCNALEPV 401
Query: 344 VTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVL 403
V +I + +N +++K+ L++ LL R IIFVE+ TA++L
Sbjct: 402 V---------AIMGERCWNSTPDAVSQKVEHLVD-LLSSELTGSSRGIIFVEQRATAVML 451
Query: 404 QSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ----------NEIVEEFRRGLVNVIV 453
L+S P K+ Y GN++ +RK +++ + G N++V
Sbjct: 452 SHLISR-YPELAHIKSDYFLGNSA---FSARKADLTELSKPGDMKNSIDDLKSGKKNLLV 507
Query: 454 ATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
ATS+LEEG+DV +C+LV+ FDP + + SF+Q RGRAR ++S +++ D+ T ++
Sbjct: 508 ATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAEDDTAT---YKD 564
Query: 514 YLASGNKMRKEVLSHASLP---CSPLNNHMYGEDFYHVESTG------------------ 552
+ A + M++ LS+ + + +ESTG
Sbjct: 565 WEAMEDIMKERYLSNKEFIDRLREEDDEEEVEYESLRIESTGYGVTPGLLLWDCLLTIYY 624
Query: 553 ---TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN----KEMGICTLYLPNNCPIQ-- 603
+ TL ++ + + +CS +P + + P F I+ K+M + LP +Q
Sbjct: 625 TVRALLTLENARAHLSHFCSTIPCE-FTDTQPDFIISKTGIKDMLTAKVLLPTVLDLQFR 683
Query: 604 ---TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPD 639
+ A K K+ A +A +L++ + D+L+P+
Sbjct: 684 EFEGIQAWKREKMAKRDAAFQAYLQLYKASLVNDHLMPE 722
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 215/466 (46%), Gaps = 74/466 (15%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKV 981
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 964 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQL----V 1017
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT +ED + + LE LGDS LK AS QL + HEG+LS KK+ I+SN+ L
Sbjct: 1018 LTAITATSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1077
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
K + L FI T F W P NS N KI +K+ +KT+AD
Sbjct: 1078 KAAVDTGLDQFILTTCFTGAKW-RPLYNSTYTN-------NAGKIGEKSTRKLSTKTLAD 1129
Query: 1102 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYQRQFQVHAERLVN 1150
VVE+LIG + GGEN L +FL I I++ + + P F R +
Sbjct: 1130 VVESLIGVAIIDGGENKVLRCLELFLPEINWLPSGERIEILYDSAP---DFNDDCPRDI- 1185
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L++YSF +LL +L+H S P YQRLEFLGD++LD ++T L+
Sbjct: 1186 LSKIEPLIDYSFTKKALLAASLSHPSN--PISGMTYQRLEFLGDSILDNIVTRALFRCKR 1243
Query: 1211 GLSPGYLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHIL 1244
+ + +R+A VN D A S+ + L +++
Sbjct: 1244 EIPHQDMHLIRTALVNADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMS 1303
Query: 1245 HASHELYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALGDIIESLAGAIF 1294
H+S ++ + +FE+ L G+ + W +++ PK DIIES+ GAIF
Sbjct: 1304 HSSTDIVETQQAMARTFEELRDQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIF 1363
Query: 1295 VDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTEYCQ 1334
+DS C + + + L+ ++ + + F HP + L Q
Sbjct: 1364 IDSRGSILACQKFLTRIGLMDYLQRVLEDDGIDFMHPKQRLGVVAQ 1409
>gi|195109134|ref|XP_001999145.1| GI24348 [Drosophila mojavensis]
gi|193915739|gb|EDW14606.1| GI24348 [Drosophila mojavensis]
Length = 2256
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 179/385 (46%), Gaps = 78/385 (20%)
Query: 1067 GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRI 1126
D S E ND S F + + + K++AD VEALIGA+L G L+F+ +
Sbjct: 1880 ADLDDSNETNDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWL 1937
Query: 1127 GIKVDFVNVPYQRQ-------------------------------------FQVHAER-- 1147
GI+V +PYQ + F +A R
Sbjct: 1938 GIRV----LPYQLEPAAADIEQRKPGSTKPDANNMVTVYGDWPTPRSPLLHFAPNAHREL 1993
Query: 1148 ---LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
L E+ L Y+FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +
Sbjct: 1994 EELLSGFEEFEASLGYTFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRH 2053
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY SPG LTD+RSA VNN +A +V+HG HK+ H S L N +D F ++
Sbjct: 2054 LYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL----NDVIDRFVRI 2109
Query: 1265 SLGSTF---------------GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
+ E V PKALGD+ ES+AGAIF+DS + +VV+Q
Sbjct: 2110 QQENGHCISEEYYLLSEEECDDAEDV-EVPKALGDVFESIAGAIFLDSNMSLDVVWQVFS 2168
Query: 1310 PLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEH 1367
+++P I ++ P+REL E + KP + VTV+V G
Sbjct: 2169 NMMKPEIEQFSNSVPKSPIRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG----- 2222
Query: 1368 TF--LDADKKTAKKVACKEVLKSLR 1390
TF + + + AK A K L+ L+
Sbjct: 2223 TFRGIGRNYRIAKCTAAKCALRQLK 2247
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 9/124 (7%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--RKK 436
E + +I+ + TA VL LL+EL R C + T +A + + ++
Sbjct: 489 ETLCALIYCNQNHTARVLFELLAELSRRDPDLKFLRCQYTTDRVADPATEPKEAELEHRR 548
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q ++++ FR NV++ TS+LEEG+DV CNLVI +DP T S++Q +GRAR + +
Sbjct: 549 QEDVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVIRWDPPTTYRSYVQCKGRARAAPAYH 608
Query: 497 LLMV 500
+++V
Sbjct: 609 IMLV 612
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1726 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1784
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 1785 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 1815
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 200/498 (40%), Gaps = 115/498 (23%)
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM--GIC----TLYLPNNCPIQ 603
STG LS++++L+ YC+RLPSD + K T + + G+ TL LP N P++
Sbjct: 820 STGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCASVVRDGVTLYQYTLRLPINSPLK 879
Query: 604 TVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP 660
I + T ++ A L+AC +LH+IG L D L P G E + A P
Sbjct: 880 HDIIGLPMPTQTLARRLAALQACVELHKIGELDDQLQP-----------IGKEGFRALEP 928
Query: 661 IYFPPELVNQSPQDTKITYH-----CYLIELKQHFNYDISAR------------------ 697
+ E + P+D +I + +Q++ I++
Sbjct: 929 DW---ECFDLEPEDEQIVQQNDEPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIQ 985
Query: 698 -NIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGR----------------IQLIPN 740
+ + E + +K+ E ++G + LK + + ++L +
Sbjct: 986 LTLQCPIPEEQNTRGRKIYPPEEAQQGFGILTLKRIPKLSAFSIFTRSGEVKVSLELARD 1045
Query: 741 QVLLCRRFQITLFRVIMDH---NLDKLNEILDGFELRDNLEIDYLLLP-----STGQLID 792
+V+L QI+ V +++ N+ +L + L F+ D+ E ++P + ++ID
Sbjct: 1046 RVVLTEE-QISCINVFLNYTFTNVLRLQKFLMLFD-PDSTENCVFIVPTIRSTADSRIID 1103
Query: 793 WKTVATVL---------FPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPH 843
W+ + + P + K + + +A ++ + + +C PH
Sbjct: 1104 WQFLELIQATGNMMPQPVPDEERQKQSFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC-PH 1162
Query: 844 NGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRI 898
+ C G T+K +Y +YG+ + +PLL+ R
Sbjct: 1163 LSPLSCFPG---------------DHYRTFKHYYLVKYGLTIQNAAQPLLDVDHTSARLN 1207
Query: 899 FHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPS 948
F Y+++ ++ K + + E L PELC + P SL + + +P
Sbjct: 1208 FLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRTAVCLPC 1265
Query: 949 IMHRLQSLLLAVNLKNML 966
I++R+ LLLA +++ +
Sbjct: 1266 ILYRINGLLLADDIRKQV 1283
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP--SPFVAVFLVPKVVL 80
R++Q+E L A ++NTI+ L S K IA+ LL+ L RK + V+V+L ++
Sbjct: 18 RDFQVELLATAFERNTIICLGHRSSKEFIALKLLQE---LSRKGLRNGKVSVYLTNQIDA 74
Query: 81 VPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ H TDLKV + D G+ W + + V + P L L+
Sbjct: 75 ENTSIYTMLTHLTDLKVWQEQRDQGISA--DHCW----TDYHVSIHKPTSFLSLLKAGNL 128
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L+ +++++L++CH + Y I+ F +L ++ PRI G+ A P+ S
Sbjct: 129 LLSSVQLIVLEDCHDSAV---YRSILPIFEEFILPAKSADRPRILGL-AGPLHS 178
Score = 40.4 bits (93), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1718 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1774
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1775 LSHLRSKQVAN 1785
>gi|350639413|gb|EHA27767.1| hypothetical protein ASPNIDRAFT_211065 [Aspergillus niger ATCC
1015]
Length = 1372
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 168/668 (25%), Positives = 297/668 (44%), Gaps = 103/668 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E E +LK+N IV +LRS LL+ + FL P V L
Sbjct: 20 RSYQVEMFEASLKENIIV-------------TVLRSSYALLQ-----LIWFLTPTVALCL 61
Query: 83 QQAE-------AIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGL 134
QQ + A++ T + K V+ W + W + + +V+V T +L D +
Sbjct: 62 QQFKFISDNIPAVRARTLTSLDK------VELWTEQPVWDAILKEMQVVVSTHAVLADAM 115
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRIFGMTASPIKS 193
+ K+ + ++I DE HH +H IM +FYH LE G +P+I G+TASP+
Sbjct: 116 SHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTASPV-- 173
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIP-FSTAKFKFYKYDEIPHALYT- 251
V S+ Q+ + +L+ + + T SE + P F D++ T
Sbjct: 174 -VRSNRQELLKIESNLDAVCKTP-RTHRSELMTHTHRPHLQQILFTPVLLDDLQVGSKTL 231
Query: 252 ----------HLADELAMIELKHT----RSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
L D+ + +L+ + R+L+ + E+ ++ + + L+
Sbjct: 232 KALVSAWTSLRLEDDPYIKKLRKSPLDGRALQKV--LESGKTYCNDQLKRFATRSLHIFE 289
Query: 298 ELGVWLALKAAETISCYESDFF---AWEQLDGFGETIIKKFG-SDASQALVTYVPSGAEW 353
ELG W A D+F + EQL G +D +A + + S
Sbjct: 290 ELGEWAA------------DYFIHASIEQLKARAGNSADTMGWTDEEKAYLLDIVSKLPI 337
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLP 412
D + + D ++ K L+E L+ +G + +IF ++ T V++ LLS +
Sbjct: 338 PNIDLTHSDPDRIPISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVT 396
Query: 413 RH---CTWKTKYIAGNNSGI--QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
+H C + G + + + + Q + + EFR G N+I+AT +LEEG+D+ +C
Sbjct: 397 KHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISAC 456
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---------QSRLENYLASG 518
++V+ FD + SF+Q RGRAR + S Y +M + D ++ Q+ +E Y
Sbjct: 457 SVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAYEDDE 516
Query: 519 NKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
++R+ + +N + + V+STG + T ++V+ + +C+ LP Y
Sbjct: 517 RRLRE------AWALEAINEEVV--ERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYAS 568
Query: 579 PTPKFHINKE-----MGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIG 630
P+F K+ G TL + ++ + Q +T + A A +A K+L++ G
Sbjct: 569 NEPEFSYEKDDADLLRGTVTLPSCVHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFG 628
Query: 631 ALTDNLLP 638
L+D+LLP
Sbjct: 629 LLSDHLLP 636
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 199/451 (44%), Gaps = 71/451 (15%)
Query: 896 RRIFHVQNYLSKCRQQKQKEP---SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
R + H Q +K Q + P SKI L E C I P + + F F V I+ R
Sbjct: 839 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 893
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
L++ L+A L +L +++ +I+ ++ AIT Q + + E GDS LK+
Sbjct: 894 LEATLVATRLCETIL----RDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 949
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S QLF + N HEG LS ++ I+ N+ L + + L FI + F P+ W P
Sbjct: 950 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 1004
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
KI +T +++ S K +ADVVEALIGA GG + R +V
Sbjct: 1005 ---------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEV 1055
Query: 1131 DFVNV-----PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
+ N+ P + + +N HL + + Y+F + SLLVE+LTH S +
Sbjct: 1056 NLENIDRTTAPMPKDGVTN--HTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQS 1113
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH--- 1242
YQRLEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1114 YQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTN 1173
Query: 1243 ---------ILHASHE----------------------LYKRINITVDSFEKLSLGSTFG 1271
L+ S E L + ++ L ++
Sbjct: 1174 VQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYP 1233
Query: 1272 WESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
W+S++ K DIIES+ GAIF+DS N
Sbjct: 1234 WKSLSQLNADKFFSDIIESILGAIFIDSHGN 1264
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 1061 KMWIIPG-DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
K W++ G D++ EL D++ R + R+ + +K A+ +
Sbjct: 815 KRWVVSGQDDTPIVELECDAVPKRRNLL--HRQTLAAKQPDSETPAI--------SSKIR 864
Query: 1120 LIFLDRIGI-KVDFVNVPYQRQFQVHAERL----VNVRHLESLL-NYSFRDPSLLVEALT 1173
LI + I K+ + + R V +RL V R E++L + F ++ A+T
Sbjct: 865 LILAENCTIDKLPYAETIFGRFISVILDRLEATLVATRLCETILRDLEFSSIRHIITAIT 924
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
S + YQR EF GD+VL + ++ L+ ++P GYL++ R V N A +
Sbjct: 925 APS---AQSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARA 981
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAI 1293
++ GL I++ K + EK+SL + T K L D++E+L GA
Sbjct: 982 ALDAGLDAFIMNKMFTPRKWSAPLIS--EKISLTP----KQRTMSTKVLADVVEALIGAS 1035
Query: 1294 FVDSG 1298
++D G
Sbjct: 1036 YIDGG 1040
>gi|358396694|gb|EHK46075.1| hypothetical protein TRIATDRAFT_292263 [Trichoderma atroviride IMI
206040]
Length = 1456
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 217/471 (46%), Gaps = 79/471 (16%)
Query: 930 IIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTK- 988
++++P+ + + +P +M+R+ S+L+A + +++ ++ I LEAIT
Sbjct: 911 LVVSPLPIDIVFMALLLPVVMYRIDSVLIASEVCSLV------DLAIRPELALEAITKDS 964
Query: 989 -------KCQEDF------HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERII 1035
+ Q DF + E LE LGD+FLK A + ++ Y + +E VK+ ++
Sbjct: 965 FNTEEHGEDQVDFQPGMGKNYERLEFLGDTFLKMATTISVYTLYPHENEFEYHVKRMLML 1024
Query: 1036 SNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
+N L E+KLPG+IRT +FD + W +D L G+ R+
Sbjct: 1025 NNKNLFTHAIEKKLPGYIRTRAFDRRTWYP----------SDLRLKKGKATKAKARRHCL 1074
Query: 1096 S-KTVADVVEALIGAFLSTGGEN---------VGLIFLDRIGIKVDFVN------VPYQR 1139
S K++ADV EALIGA TG N V + ++F + P
Sbjct: 1075 SHKSIADVCEALIGAAYLTGKSNNSMDMAVKAVTAMVSSENHTMINFSDYRARYTTPEWH 1134
Query: 1140 QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLD 1198
++ +A + V + ++ Y F+ LL A H SY+ E I R YQ+LEFLGDA++D
Sbjct: 1135 TYEPNAAQRNMVERIAEIIGYRFQCAPLLRSAFKHSSYVYEEKIRRDYQQLEFLGDALID 1194
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
++ +LY ++P P +LT+ + A V+N VK GL KH++ A+ L+ I
Sbjct: 1195 MVVVDFLYTRFPEADPKWLTEHKMAMVSNQFLGFLCVKLGLSKHLMLATSSLHSLIREYT 1254
Query: 1259 DSF---------------EKLSLGSTFG------------WESVTSFPKALGDIIESLAG 1291
K + GS G W + PKAL D++E+L G
Sbjct: 1255 AEAKEAEEKAKGCRKPHGNKAAAGSDKGASAEAPSVTLDFWAEIQQPPKALADVVEALVG 1314
Query: 1292 AIFVDSGCNREVV----FQSIRPLLEPM-ITPETMRFHPVRELTEYCQKNH 1337
A+FVDSG + VV + I+P E M + HPV L Q+++
Sbjct: 1315 AMFVDSGYSFSVVQDFFAKFIQPYFEDMSLLSSFASNHPVTVLIHALQEDY 1365
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 14/206 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL-----RKPSPFVAVFLVPK 77
R YQ++ E A +NTIV L+TG+GKTLIA +LLR + + +P A F+V K
Sbjct: 50 REYQIDLYERAKNENTIVVLDTGTGKTLIAALLLRRVLEVEIENREKGYTPKSAFFIVEK 109
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V L QQ + + + +GK +GDM D D W+++ S++ V T Q LL
Sbjct: 110 VALCFQQYAVLTSNLEFPIGKIFGDMNGDIGDPEFWRQQFSENMAFVCTAQTLLSMFGAG 169
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
+ ++ + +L+ DE HH + H YA IM E+Y R ++ PRI GMTASP V +
Sbjct: 170 FISMDRVNLLVFDEAHHTKKNHAYARIM-EYYPRW----ENERPRILGMTASP----VDT 220
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASE 223
S+ D DLE ++ K+ T + E
Sbjct: 221 SKGDVRIAAMDLEEMLCGKIATISDE 246
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 26/267 (9%)
Query: 389 RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN--SGIQCQSRKKQNEIVEEFRR 446
RCI+FVE+ TA +L L + +T Y+ G+N SG S K Q +++F+R
Sbjct: 371 RCIVFVEQRTTAFLLADLFKQPGMSIPGMRTAYMIGSNATSGAANMSLKDQVVSLQKFKR 430
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G N + ATS+ EEG+DV C++++ FD + +IQS+GRAR + Y+ +V+S +
Sbjct: 431 GEFNCLFATSVAEEGIDVPECDVIVRFDLCVSAIQYIQSKGRARQSSFLYVTLVESKNIH 490
Query: 507 TQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF-------------YHVESTGT 553
+ + ++ ++++ C L EDF ES G
Sbjct: 491 HHRKFQQAKSAAFELQRF--------CRALPEDRKVEDFDVRPEVLQSCETIIATESGGG 542
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTV--IAQGNI 611
+ L S++ + Y S L DG K +K+ I ++ LP+ PI+T+ I+Q
Sbjct: 543 L-KLVDSLACLAKYTSSLSRDGLQKIEYVVKSDKKQFIASVVLPDGSPIKTIQGISQRTK 601
Query: 612 KTLKQAACLEACKKLHQIGALTDNLLP 638
+ + +A EAC+ L + G + +L P
Sbjct: 602 QLARCSAAFEACRILIEKGYIDKHLRP 628
>gi|346327498|gb|EGX97094.1| RNA helicase/RNAse III, putative [Cordyceps militaris CM01]
Length = 1392
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 187/696 (26%), Positives = 302/696 (43%), Gaps = 107/696 (15%)
Query: 13 EVSADTLPF--ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV 70
+++ + PF +R YQLE L+ +LK+N IV ++TGSGKT IAI+ +R A L +
Sbjct: 21 DLTMEDAPFRASRAYQLEMLQMSLKENVIVAMDTGSGKTQIAILRIR--AQLESSSDQKL 78
Query: 71 AVFLVPKVVLVPQQAEAIKMHT-DLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
FL P V+L QQ AI+M + + G+ V W +TWK +S + +V T Q+
Sbjct: 79 IWFLAPTVLLCAQQVAAIRMEIPSISIRLIVGNDNVHTWGASTWKSLLSGTQAVVSTYQV 138
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLL---ETGDSNL-PRIFG 185
LLD L ++ KL+ H+ G H IM FYH E +S+ P I G
Sbjct: 139 LLDALDHAFVKLD---------AHNCVGSHPGGKIMNHFYHYQTTPQEAANSSARPAILG 189
Query: 186 MTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI--PFSTAKFKFYKYD 243
+TA+P S Q + + LE ++++K C S S+ + + + + +
Sbjct: 190 LTATP-------SMQAHITGVEKLEKVLDAK---CVSPSLHREELLRHVKRPQLRIIECE 239
Query: 244 EIPHALYTHLADELA-------MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCL 296
YT L ++E + SL + + + L R + + L
Sbjct: 240 STSTEHYTESMTSLRQECVKMDILEDPYVISLRTQNTDRSMRRLQRVMAEQKTWSRLQVS 299
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGF---GETII----------KKFGSDASQAL 343
S L ++ + + +DF+ W F E+++ K + + Q +
Sbjct: 300 SLLNRSRTIR--NVLGPWAADFYIWRSKHTFLQNLESVVPSLDGWIPEEKLYIARVLQDI 357
Query: 344 VTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIV 402
P+ IG DS +++K+ L+ LL ++G D+ IIFV ER A++
Sbjct: 358 AALEPTPR--PIGQDS--------VSDKVHLLLRELLTFQG--DVIGIIFVTERATAAVL 405
Query: 403 LQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQN----------EIVEEFRRGLVNVI 452
L S +P + +Y G G +K++ + + EFR G +N++
Sbjct: 406 AALLRS--IP---GIRDRYQIGCMVGTSNNQLRKRSLYEFFGSNDLQTLHEFREGTINLL 460
Query: 453 VATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLE 512
VAT++LEEG+DV +CNLVI FD ++ SFIQ RGRARMQ+S LL S ++
Sbjct: 461 VATAVLEEGIDVPACNLVICFDSPQSPKSFIQRRGRARMQDSTLLLFTHKESSI----ID 516
Query: 513 NYLASGNKMRK----EVLSHASLPCSPLNNHMYGEDF-YHVESTGTIATLSSSVSLIYFY 567
+ +++K H L L G DF + V TG ++ + +
Sbjct: 517 EWAVFEEEIQKLCQDSEREHQHL--QTLERLDEGIDFCFRVPYTGARLDHDNAKQHLEHF 574
Query: 568 CSRLPSDGYFKPTPKFHINKEMG------ICTLYLPNNCPIQTVIAQGNIKTLKQA---- 617
C + S Y P + G ++LP + P + + Q + L +A
Sbjct: 575 CRVISSRQYTDGRPDYVTKLTEGDHGLAITAQVFLPASLPPKLRVFQSSRSWLSEANAMK 634
Query: 618 -ACLEACKKLHQIGALTDNLLP-----DIVVEKHDA 647
A +A L G + NLLP D+ VE A
Sbjct: 635 DAAFQAYLALFHAGLVNKNLLPLEINIDLEVESRAA 670
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 206/452 (45%), Gaps = 65/452 (14%)
Query: 934 PISLSTFYSF--------TFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL-EA 984
P+S +T S VPSI+H ++++L+ L LLD + I +L +A
Sbjct: 885 PVSYATMDSIHIKHARFGMLVPSIVHIIETMLIVRQLSVTLLD----PLGISDYFLLRDA 940
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
I+ + E H E LE LGDS LKY AS Q T + EG LS KER+I+N+ L +
Sbjct: 941 ISARSAMEPTHYERLEFLGDSILKYCASMQAAVTNLDWSEGYLSKYKERLIANSRLSRAA 1000
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
E L FI + F + W + +++ G K+ + ++ + +K +ADVVE
Sbjct: 1001 VETGLSRFILSMPFTGQKW---------RPFHLETVLAG-KMKPSPKRNLSTKVLADVVE 1050
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ--FQVHAERLVNVRHL---ESLLN 1159
ALIG + GG + L + D+++ R+ F VN +L E L+
Sbjct: 1051 ALIGVAYTVGGIPKTIQCLSIFITECDWMDPSDCREEFFSCAPSHGVNSSYLHVLEELVG 1110
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
YSF SLL+EA TH SY+ R ++RLEF+GD++LDY+I L N P L+ +
Sbjct: 1111 YSFTKKSLLLEATTHASYIGDIFGRSWERLEFIGDSILDYIIVNKLINHTPPLAHSQMHI 1170
Query: 1220 MRSASVNNDCYALSSV----------------------KH-GLHKHILHASH-------E 1249
+++A VN D A S+ KH L K I H+S E
Sbjct: 1171 IKTAMVNMDFLAFISLEEHELSQTESFVTESGTVLTENKHTALWKFIRHSSSGIGPAQLE 1230
Query: 1250 LYKR-INITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSG----CNRE 1302
KR + + G + W + K D++E++ GA++VDSG C
Sbjct: 1231 TAKRHVQFRGAILRAIRDGDHYPWHILIKLHASKFYSDLVEAVVGALWVDSGSLAPCEAF 1290
Query: 1303 VVFQSIRPLLEPMITPETMRFHPVRELTEYCQ 1334
+ I P L+ ++ HP EL + Q
Sbjct: 1291 LARVGILPYLDRVLADGVHMQHPKEELGKLAQ 1322
>gi|119174400|ref|XP_001239561.1| hypothetical protein CIMG_09182 [Coccidioides immitis RS]
Length = 1357
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 210/443 (47%), Gaps = 47/443 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+E E A K N I L+TGSGKTLIA++LL+ V V LV
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEKPHRVDSVTLVF 159
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA ++ + + +V K+ G M D W+G TW+ ++K+ V+V T ++L L ++ K+
Sbjct: 160 QQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLHAFVKME 219
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +LI DE H+A+ H YA I+ +FY L+ G++ P+IFGMTASP+ +K+ D
Sbjct: 220 NINLLIFDEAHNAKKDHPYARIVKDFY---LKDGNAKRPKIFGMTASPVDAKM-----DV 271
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIEL 262
+ +LETL+NS++ T ++ S+L +P + + YD + T L EL
Sbjct: 272 VKAARNLETLLNSQIATASNLSLLRQSVPRPNE--EVWSYDRLDQPFETRLYKELRS-RF 328
Query: 263 KHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWE 322
R+LE K+ + L S LG W A+ + Y +
Sbjct: 329 GDLRALE-----------------KLFTFSLKASSNLGAW----CADWVWSYALTEESLP 367
Query: 323 QLDG------FGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN---LDSGLLTEKIV 373
+L+G G I K +A + + +E I KF + LL+ K+
Sbjct: 368 KLEGRAARTAMGNLPIAKIVR--PEAEIQRIREASE--IIRSHKFGDPAVRPELLSPKVR 423
Query: 374 CLIESLLEY-RGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY-IAGNNSGIQC 431
L LL+Y D +CI+F E+ TA +L L S + +H + + SG
Sbjct: 424 RLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSRIGTKHLRPGVLIGVRSDASGGMN 483
Query: 432 QSRKKQNEIVEEFRRGLVNVIVA 454
S ++Q V FR+G VN + A
Sbjct: 484 ISFRQQVLAVVSFRKGEVNCLFA 506
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 166/400 (41%), Gaps = 86/400 (21%)
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------------ 995
I+ R++S L+A L+ C + ++ I LEA+T D H
Sbjct: 898 IISRIESYLIA-------LEACQELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMG 950
Query: 996 --LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFI 1053
E LE LGD FLK A S LF +N ER L L +
Sbjct: 951 KNYERLEFLGDCFLKMATSISLFAMNPDN--------DERGWYPGGLTLLQGK------- 995
Query: 1054 RTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLST 1113
G + G+ E + + KT+ADV EALIGA
Sbjct: 996 -------------GQSKGATE---------------NKHALADKTIADVCEALIGACCLL 1027
Query: 1114 GGEN----------VGLIFLDRIGI-----KVDFVNVPYQRQFQVHAERLVNVRHLESLL 1158
+N L+ D + ++P + V A L ++ L
Sbjct: 1028 ASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVDAAELDLAAQVKKKL 1087
Query: 1159 NYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
Y F+ P LL A TH SY +P CYQRLEFLGDA+LD ++Y+K+P P +
Sbjct: 1088 GYDFKYPKLLRSAFTHPSYPSAWARVP-CYQRLEFLGDALLDMACVEHIYHKHPDKDPQW 1146
Query: 1217 LTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS---TFGWE 1273
LT+ + A V+N +V+ GLH H+ H S L +I V+ E L S W
Sbjct: 1147 LTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGDPPDAWT 1206
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
+ PK L D++E+ GAIF+DSG + EVV + + L+
Sbjct: 1207 LTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLK 1246
>gi|239610437|gb|EEQ87424.1| dicer-like protein 2 [Ajellomyces dermatitidis ER-3]
Length = 1509
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 174/700 (24%), Positives = 304/700 (43%), Gaps = 121/700 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIA-----------------IMLLRSYAYLLRK 65
R YQLE LE +L++N I+ ++TGSGKT + + +L + +LR
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVVPTHELEIDAQVLNYFSDLTILWIFRAILRI 107
Query: 66 PSPF-------VAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGAT-WKEE 116
+ FL P V L QQ ++I + + G V++W W +
Sbjct: 108 RHELETCAAHKLVWFLAPTVALADQQHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDI 167
Query: 117 MSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-T 175
+ ++V TPQ+LLD + + ++ I +L+ DE HH +M FYH L+ T
Sbjct: 168 LLNIRIVVSTPQVLLDAMTHGFVTMSRIALLVFDEAHHCAENEAPNILMQRFYHEQLQRT 227
Query: 176 GDSN-LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
G +N LP I G+TASPI +KV + Y KI E +NS+ C + +
Sbjct: 228 GTANDLPHILGLTASPI-TKV---DPKYLMKI---EHNLNSR---CETPRI--------- 268
Query: 235 AKFKFYKYDEIPHALYTHLADELA----MIELKHTRSLENLDLNEAQ--AELIRKKVSKI 288
+ + +Y P + +++ +++ H R +E +D+ + L ++K +
Sbjct: 269 HREELMRYVHRPELCTVNFQVDVSVGSDILQSLH-RIVETVDIEQDPWIKRLKQQKDRRS 327
Query: 289 NSTLLYCLSE---LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT 345
+TLL + + + K + + AW D F ++K+ G+ ++
Sbjct: 328 QNTLLNAMVKRKTFAISQMTKLRRQATNIHENLGAWAA-DAFISEVLKRLGAKRAKQSAD 386
Query: 346 YV---------------------PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRG 384
++ PS W D L++ K LI+ LLE
Sbjct: 387 HLGTLEREQENFVFETLSQLPIYPSKQYWDSEPD--------LVSSKANLLID-LLEKEH 437
Query: 385 VEDIRCIIFVERVITAIVLQSLLSE-------LLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
D IIF ++ T +L L+S+ ++P Y ++ + + K Q
Sbjct: 438 TSDFTGIIFAQQRSTVTMLAHLISKHPRLKDLIVPGAFLGDAGYADRTSTITELHNTKTQ 497
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
+++ R G N++VATS+LEEG+DV +C+LV+ FD + SFIQ RGRAR + S ++
Sbjct: 498 RGSIDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFV 557
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----------FY 546
+ + +GD +Q + NKM + S L N E+ +
Sbjct: 558 IFL-NGDDKSQEK------KWNKMEDVMKSMYEEDMRRLENIWAIENIEEEADEKENEYL 610
Query: 547 HVESTGTIATLSSSVSLIYFYCSRLPSD-GYFKPTPKFHINKEMGICT--LYLPNNCPIQ 603
+ESTG + T ++ + +C+ L D +P + ++ G+ T + LPN +
Sbjct: 611 RIESTGALLTFENARPHLEHFCATLQCDFTDTRPVFLYSESEPGGMVTGKVILPNVLDPK 670
Query: 604 TVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
+ +G+ + ++ A +A KL++ G + DNLLP
Sbjct: 671 FRVIRGSKWWRRERMAQRDAAFQAYVKLYREGLVNDNLLP 710
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 201/459 (43%), Gaps = 68/459 (14%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F T PSIMH+++ L+A L K +L ++++ V+
Sbjct: 958 PARDCSIDKLPLEFSLFALLT--PSIMHKVEIYLIAEQLNKTILKPVAFTDLSL----VV 1011
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL HEGLLS K+ ++SN L
Sbjct: 1012 TAISASVAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSY 1071
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N E + + ++++ +KT+ADV
Sbjct: 1072 AAVETGLDKFILVDVFTGAKW-RPRYNKVHLESEEQGI---------PQREMTTKTLADV 1121
Query: 1103 VEALIGAFLSTGGENVG----LIFLDRIGIKV--DFVNVPYQRQFQVHAE-RLVNVRHLE 1155
VEAL+GA GGE IFL I D +N Y + + R + +E
Sbjct: 1122 VEALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDRINALYNSVPEAYENIRTSWFQEIE 1181
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
SLL YSF LV+A TH S YQRLEF+GDA+LD++I +L+N L
Sbjct: 1182 SLLGYSFNKKVFLVQAFTHPSNP-GSTTSSYQRLEFVGDAILDHIIVHHLFNSSRNLPHF 1240
Query: 1216 YLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHILHA-SH 1248
+ MR+A N D A L++ K L +++ H S
Sbjct: 1241 DMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKKNTVTSLTTRKVFLWQYMRHGTSW 1300
Query: 1249 EL--------YKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDS- 1297
EL + + D E L +T+ W ++ K D+IES+ GAIF+DS
Sbjct: 1301 ELAAAQQQTADQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAIFIDSH 1360
Query: 1298 ----GCNREVVFQSIRPLLEPMITPETMR-FHPVRELTE 1331
C + + L M+ E+M HP + L +
Sbjct: 1361 GSLDACTAFLERIGLMKFLRRMLVEESMDIMHPKQRLGQ 1399
>gi|261195592|ref|XP_002624200.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239588072|gb|EEQ70715.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
Length = 1509
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 174/700 (24%), Positives = 304/700 (43%), Gaps = 121/700 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIA-----------------IMLLRSYAYLLRK 65
R YQLE LE +L++N I+ ++TGSGKT + + +L + +LR
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVVPTHELEIDAQVLNYFSDLTILWIFRAILRI 107
Query: 66 PSPF-------VAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGAT-WKEE 116
+ FL P V L QQ ++I + + G V++W W +
Sbjct: 108 RHELETCAAHKLVWFLAPTVALADQQHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDI 167
Query: 117 MSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLE-T 175
+ ++V TPQ+LLD + + ++ I +L+ DE HH +M FYH L+ T
Sbjct: 168 LLNIRIVVSTPQVLLDAMTHGFVTMSRIALLVFDEAHHCAENEAPNILMQRFYHEQLQRT 227
Query: 176 GDSN-LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
G +N LP I G+TASPI +KV + Y KI E +NS+ C + +
Sbjct: 228 GTANDLPHILGLTASPI-TKV---DPKYLMKI---EHNLNSR---CETPRI--------- 268
Query: 235 AKFKFYKYDEIPHALYTHLADELA----MIELKHTRSLENLDLNEAQ--AELIRKKVSKI 288
+ + +Y P + +++ +++ H R +E +D+ + L ++K +
Sbjct: 269 HREELMRYVHRPELCTVNFQVDVSVGSDILQSLH-RIVETVDIEQDPWIKRLKQQKDRRS 327
Query: 289 NSTLLYCLSE---LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT 345
+TLL + + + K + + AW D F ++K+ G+ ++
Sbjct: 328 QNTLLNAMVKRKTFAISQMTKLRRQATNIHENLGAWAA-DAFISEVLKRLGAKRAKQSAD 386
Query: 346 YV---------------------PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRG 384
++ PS W D L++ K LI+ LLE
Sbjct: 387 HLGTLEREQENFVFETLSQLPIYPSKQYWDSEPD--------LVSSKANLLID-LLEKEH 437
Query: 385 VEDIRCIIFVERVITAIVLQSLLSE-------LLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
D IIF ++ T +L L+S+ ++P Y ++ + + K Q
Sbjct: 438 TSDFTGIIFAQQRSTVTMLAHLISKHPRLKDLIVPGAFLGDAGYADRTSTITELHNTKTQ 497
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
+++ R G N++VATS+LEEG+DV +C+LV+ FD + SFIQ RGRAR + S ++
Sbjct: 498 RGSIDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFV 557
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-----------FY 546
+ + +GD +Q + NKM + S L N E+ +
Sbjct: 558 IFL-NGDDKSQEK------KWNKMEDVMKSMYEEDMRRLENIWAIENIEEEADEKENEYL 610
Query: 547 HVESTGTIATLSSSVSLIYFYCSRLPSD-GYFKPTPKFHINKEMGICT--LYLPNNCPIQ 603
+ESTG + T ++ + +C+ L D +P + ++ G+ T + LPN +
Sbjct: 611 RIESTGALLTFENARPHLEHFCATLQCDFTDTRPVFLYSESEPGGMVTGKVILPNVLDPK 670
Query: 604 TVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
+ +G+ + ++ A +A KL++ G + DNLLP
Sbjct: 671 FRVIRGSKWWRRERMAQRDAAFQAYVKLYREGLVNDNLLP 710
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 201/459 (43%), Gaps = 68/459 (14%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F T PSIMH+++ L+A L K +L ++++ V+
Sbjct: 958 PARDCSIDKLPLEFSLFALLT--PSIMHKVEIYLIAEQLNKTILKPVAFTDLSL----VV 1011
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL HEGLLS K+ ++SN L
Sbjct: 1012 TAISASVAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSY 1071
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N E + + ++++ +KT+ADV
Sbjct: 1072 AAVETGLDKFILVDVFTGAKW-RPRYNKVHLESEEQGI---------PQREMTTKTLADV 1121
Query: 1103 VEALIGAFLSTGGENVG----LIFLDRIGIKV--DFVNVPYQRQFQVHAE-RLVNVRHLE 1155
VEAL+GA GGE IFL I D +N Y + + R + +E
Sbjct: 1122 VEALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDRINALYNSVPEAYENIRTSWFQEIE 1181
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
SLL YSF LV+A TH S YQRLEF+GDA+LD++I +L+N L
Sbjct: 1182 SLLGYSFNKKVFLVQAFTHPSNP-GSTTSSYQRLEFVGDAILDHIIVHHLFNSSRNLPHF 1240
Query: 1216 YLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHILHA-SH 1248
+ MR+A N D A L++ K L +++ H S
Sbjct: 1241 DMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKKNTVTSLTTRKVFLWQYMRHGTSW 1300
Query: 1249 EL--------YKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDS- 1297
EL + + D E L +T+ W ++ K D+IES+ GAIF+DS
Sbjct: 1301 ELAAAQQQTANQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAIFIDSH 1360
Query: 1298 ----GCNREVVFQSIRPLLEPMITPETMR-FHPVRELTE 1331
C + + L M+ E+M HP + L +
Sbjct: 1361 GSLDACTAFLERIGLMKFLRRMLVEESMDIMHPKQRLGQ 1399
>gi|170091728|ref|XP_001877086.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648579|gb|EDR12822.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1358
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 235/533 (44%), Gaps = 100/533 (18%)
Query: 890 EPLLNGRRIFHVQNYL---SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFV 946
+P++ R+ V+N+L SK K P+K L PELC P S T + +
Sbjct: 750 QPIIQVERVSPVENHLDPTSKPLTPPSKAPAKY---LIPELCAKFTLPAS--TLRTALLL 804
Query: 947 PSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSF 1006
PSIM R+ LL+ L DH ++ + ++ +++ E LE LGD+F
Sbjct: 805 PSIMRRIDDLLIVKELNARFFDHAIREDLLHV-----SLCAPSAGLEYNYERLELLGDAF 859
Query: 1007 LKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE-----SFDP- 1060
LKY + +F +EG L + ++++ISN +L + LP +I+ + S+ P
Sbjct: 860 LKYLCTIYVFVAEPTQNEGSLHIARQKLISNKSLLENSNLIGLPVYIQAKPFPAKSWQPP 919
Query: 1061 ---------KMWIIPGDNS-----------------GSYE-----------------LND 1077
KM + D G++ +N+
Sbjct: 920 NFRLTPRTSKMIVDKSDEEAFTPMILGSEMSSDVVEGAFTRTSTACNPHVSGVDLAVINE 979
Query: 1078 DSLFNGRKIYVTGRKKVK-------------SKTVADVVEALIGAFLSTGGENVGLIFLD 1124
S N R G+K K K VADVVEA+IGA +GG L
Sbjct: 980 TSDVNERDPPFYGKKNKKKARQDEQSSQWLGDKAVADVVEAIIGAAYISGGRETALQVTK 1039
Query: 1125 RIGIKVDFVN--VPYQRQFQVHAE------RLVNVRHLESLLNYSFRDPSLLVEALTHGS 1176
+ I + +N + R R + +E ++ ++F+ P LL +ALTH S
Sbjct: 1040 ALAIPISNINRWSDFGRNVSTPPPDASAKLRPESTSAIERIIGHNFQRPHLLAQALTHSS 1099
Query: 1177 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVK 1236
M Y RLEF+GDA+LD+++ +++N+ LSPG LT ++ A V+N A V
Sbjct: 1100 -MQGHESASYGRLEFIGDAILDFMVIQHIFNRDQTLSPGALTLLKGAMVSNSALAAVCVS 1158
Query: 1237 HGLHKHILHASHELYKRINITVDSF------EKLSL---GSTFG--WESVTSFPKALGDI 1285
GL KH+L S++L I + + E L+ G + G W + PKAL D+
Sbjct: 1159 SGLRKHLLFESYQLAGSIEVYANELKARQQKEYLAAEREGRSPGQYWLGIEP-PKALSDV 1217
Query: 1286 IESLAGAIFVD---SGCNREVVFQSI-RPLLEPMITPETMRFHPVRELTEYCQ 1334
+ES+ GAI++ + E +F ++ +P + IT +T+ HP + L E Q
Sbjct: 1218 VESIIGAIYISDDFTPIGAERLFNNVLKPFYDKHITLQTLSHHPTKILFELFQ 1270
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 389 RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN-SGIQCQSRKKQNEIVEEFRRG 447
R IIFV++ A+VL L R+ + ++I G K+ EI F G
Sbjct: 225 RGIIFVQKRAIALVLVDLF-----RNLYHELRFIRPCALFGHSFSDFKRHQEIFHGFVTG 279
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
N++VAT E+ L++ ++VI +D + S ++ R + S + MV+ G+
Sbjct: 280 EYNLLVATKSTED-LEIPRASMVIRYDLFDSQTSHAYAKARTCGRESHLIHMVERGNDMH 338
Query: 508 QSRLENYLASGNKMRK--EVLSHASLPCSPLNNHMYGEDF--YHVESTGTIAT------- 556
L + + +G + + E L + +P+ E YH +S +T
Sbjct: 339 HHILSHIMNAGADILRWTEALYEMANNFAPVPPRDIRESINPYHSDSDDEDSTEEYITDP 398
Query: 557 -------LSSSVSLIYFYCSRLPSDGYFKPTPKF-----HINKEMG-----ICTLYLPNN 599
+ + ++IY + + L S G+ K I+ G +C++ LP
Sbjct: 399 TTSGRIYIQDATTVIYRFTAGLKSTGFRLEDDKSLFDLKEIHSGFGTTNTLVCSVTLPGT 458
Query: 600 CPIQTVIAQGNIK--TLKQAACLEACKKLHQIGALTDNL--LPDIVVEKHDA 647
I + ++ +++AC EAC++L G L + LP ++ +H+
Sbjct: 459 V-IDNISGSPSLSKSQARRSACFEACRELSNAGLLDYRMVPLPPFLLRQHNG 509
>gi|392568586|gb|EIW61760.1| ribonuclease III [Trametes versicolor FP-101664 SS1]
Length = 1232
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 207/464 (44%), Gaps = 66/464 (14%)
Query: 938 STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLE 997
STF + +PS+M ++ S LL L L H +I ++L A++T+ +F+ E
Sbjct: 681 STFRTLWLLPSVMTKVDSCLLVKELDAKLFHH-----SISEQQLLIALSTRAAWTEFNYE 735
Query: 998 SLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTES 1057
LE LGD+FLK AS L+ T EG L ++ II N L + + F++ +
Sbjct: 736 RLEFLGDAFLKVIASNFLYVTMPTAGEGTLHNVRQSIIGNKVLHECAMRVGICPFVQHKR 795
Query: 1058 FDPKMWIIPG-DNSGSYELNDDSLF--------------------NGRKIYVTGRKKVKS 1096
F K+W P + E N+D R++ R +
Sbjct: 796 FVAKLWQPPHIPAPTATEPNEDVEMADGEGTGDGGEGKGNRKKSKKERQLSAQNRLWMGD 855
Query: 1097 KTVADVVEALIGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYQRQFQVHAERLV 1149
K VADVVEA++ A +GG L I L I DF + Q+ Q
Sbjct: 856 KVVADVVEAILAAAFLSGGHEGALQAARRLQIPLPNIAQWTDFTRIGAQQGEQDAGAGAA 915
Query: 1150 -------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
V +++++ F P LL +ALTHGS Y+RLEF+GDA+LD+L+
Sbjct: 916 GAFVLDDTVEAVQAIVGSVFSKPELLAQALTHGSAFGSSEGASYERLEFIGDAILDFLVA 975
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE 1262
+++ ++P LSPG LT ++ V+N A V GLH+H+ AS +L I V S
Sbjct: 976 RHIFQRHPHLSPGGLTLLKGGMVSNRALAAFCVTTGLHRHLHFASDQLADSIQRYVTSLT 1035
Query: 1263 KL------------SLGSTFGWESVTSFPKALGDIIESLAGAIFV-----DSGCNR--EV 1303
+L L + + PK L D++ES+ GA++V + G R +
Sbjct: 1036 ELREKEYEAVAREQRLPGQYWLDLPLEPPKCLSDLVESILGALYVCDGFFEVGVGRFFDA 1095
Query: 1304 VFQSIRPLLEPMITPETMRFHPVRELTEYCQ----KNHFSMKKP 1343
VF +P ++ + +T+ +P L E Q + H +K P
Sbjct: 1096 VF---KPFMDAHVRLQTLSTNPKVTLLELLQAEGCRQHAVVKLP 1136
>gi|146149942|gb|ABQ02405.1| dicer [Schistosoma mansoni]
Length = 2641
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 173/375 (46%), Gaps = 98/375 (26%)
Query: 981 VLEAITTKKCQEDF-HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+L+A+T C DF +LE +ET+GDSFLK+ + L+ TY HEG LS + RI+ N+
Sbjct: 1947 ILQALTMS-CSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSN 2005
Query: 1040 LCKLGCEQKL-----------------PGF------------------------------ 1052
L +LG + L PG+
Sbjct: 2006 LYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIWSTDTL 2065
Query: 1053 -----IRTESFDPKMWIIPGDNS--GSYELNDDSLFNGRKI----YVTGRKKVKSKTVAD 1101
+R F + I P +N ++ ND + + + + +T ++ + K++AD
Sbjct: 2066 MDDEVLRNIDFIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIPDKSIAD 2125
Query: 1102 VVEALIGAFLSTGGENVGLIFLDRIGI--------------------KVDFVNVPYQRQF 1141
VEALIG +L+T GE L + GI K ++++ R
Sbjct: 2126 CVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDTDENRAN 2185
Query: 1142 QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY------------------MLPEIP 1183
A + LES LNY+F+DPSLL++A TH SY M
Sbjct: 2186 LNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNLMFSTDL 2245
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN+ +A +V+ GLHK+
Sbjct: 2246 DCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLHKYF 2305
Query: 1244 LHASHELYKRINITV 1258
+S +L I++ V
Sbjct: 2306 RASSPQLLHTIDVFV 2320
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET--MRFHPVRELTEYCQKN 1336
PKAL DI ESLAGAIF+DS + + V+Q P+++ I T + PVR+L E +
Sbjct: 2512 PKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKERIERYTACIPKSPVRQLLELEPE- 2570
Query: 1337 HFSMKKPVASR-ISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
K A R + G+ +V V GR + + + + AK +A K L+ LR
Sbjct: 2571 --GTKFERARRMVDGRISVCAHVLGKGRFYG---VGRNYRLAKSLAAKRALRVLR 2620
Score = 43.5 bits (101), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 437 QNEIVEEFRRGLVNVIVAT-----SILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q E + FRRG +N++VAT ++ G ++ CNLVI ++ ++ S+ R+R+
Sbjct: 765 QEETITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRL 824
Query: 492 QN 493
N
Sbjct: 825 VN 826
>gi|336365445|gb|EGN93795.1| hypothetical protein SERLA73DRAFT_115225 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1493
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 224/483 (46%), Gaps = 66/483 (13%)
Query: 916 PSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNV 974
P++ + L P R+++ + + + +PSI+ L + ++L++ L + +
Sbjct: 962 PAEKTVLLLPRYTRVVLLSPAETEYAQI--LPSIIRHLSVMTTVISLRDTLFTGTPLSKI 1019
Query: 975 TIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERI 1034
+P + A+T Q + E LETLGD LK+ S L + + HEG L+ +K+
Sbjct: 1020 PLPLLTT--ALTAPVSQGLINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHG 1077
Query: 1035 ISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKV 1094
+SNA L K +KL +I + F P+ W + N+D + ++ V G
Sbjct: 1078 VSNAQLAKNAVLKKLYRWIIRDRFTPRKWT---PRYCTPPQNEDQI--KEEVEVEGSDSR 1132
Query: 1095 KSKTV---------ADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA 1145
KS+ V ADVVE+LIGA GG ++G+ G+ +++ + + +
Sbjct: 1133 KSRAVIEELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGLGLEWWGLAKCVETALSV 1192
Query: 1146 ERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
+ V +E +L Y+F LL+EALTH S+ Y+R+EFLGD++LD +
Sbjct: 1193 VETTDDFPAQVTDVELMLGYNFTRKLLLIEALTHASHQFDTRTVSYERMEFLGDSILDMI 1252
Query: 1201 ITVYLYN-KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH------------------- 1240
IT YLY+ G SPG++ +S+ VN A +++ L
Sbjct: 1253 ITDYLYHVPGKGYSPGHMHMRKSSVVNTHFLAFICLRNSLKVDTSMPGPNHEGRITLNTQ 1312
Query: 1241 -------KHILHASHELYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALG 1283
+ +LH+SH + + T + K L S F W ++T PK
Sbjct: 1313 SQEIYLWQCLLHSSHTILEDQKTTFSRYNKVKAQIEDALQNDSIFPWAALTKLQAPKFFS 1372
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIR-----PLLEPMITPETMRFHPVRELTEYCQKNHF 1338
D+IESL GA ++DSG N VV + +R P LE ++ + HPV ++ + Q+ +
Sbjct: 1373 DMIESLIGAAYLDSGGNINVVREILRKLGILPTLERIVRDDVDVLHPVSRVSLWTQREYK 1432
Query: 1339 SMK 1341
+++
Sbjct: 1433 TIE 1435
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Query: 4 VSMESDTTEEVSADTLPFA--RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY 61
+ME + + S TL + R YQ E L+ +LK N I+ +TGSGKT IAI+ ++ A
Sbjct: 3 TNMEEPSDQAPSPSTLALSQTRGYQQEMLDASLKGNIIIAQDTGSGKTRIAILRMKIEAE 62
Query: 62 LLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKH 120
+P+ V+ FL P V L QQA+ IK+ + VG G W + A W+ + +H
Sbjct: 63 C--EPNK-VSWFLAPTVALCQQQADVIKLDLPVSVGMISGACEPIQWKESALWRGVLQRH 119
Query: 121 EVLVMTPQILLDGLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRL-LETGD- 177
+LV TPQ+LLD LR Y L I +LI DE HHA H Y CIM EFY +L + D
Sbjct: 120 RILVTTPQVLLDALRHGYINLGRDIGLLIFDEAHHATDNHPYNCIMKEFYFKLPVRQSDL 179
Query: 178 -------------SNLPRIFGMTASPI 191
+ P + G+TASPI
Sbjct: 180 DDAISRGVQRKFRNERPMVLGLTASPI 206
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 185/434 (42%), Gaps = 78/434 (17%)
Query: 369 TEKIVCLIESLLEYRGV-----EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
+EK+ L++SLL+ + E I+FV R + L +L+ ++ +
Sbjct: 396 SEKVKVLVQSLLDEKAWAESHNEPYSGIVFVTRRDVVLALTEVLAHHPETSQRFRVGCLL 455
Query: 424 GNNSGIQCQS---------RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
G++ +S ++ Q + +FR G +N+I+AT++ EEGLD+Q+C VI +D
Sbjct: 456 GSSDSAYRRSFLDITRTLLKQSQANTLLDFRSGDINLIIATAVAEEGLDIQACGNVIRWD 515
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-----RLENYLAS--GNKMRKEVLS 527
+ S+ QSRGRAR + S ++LM ++G Q +LE + N R +
Sbjct: 516 APNNMASWAQSRGRARRERSSFVLMFQAGSDDKQQVMKWEQLEKQMMDLYSNDQRDTGNT 575
Query: 528 HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK 587
H S L++H G+ + VESTG + +L S+VS + +CS LP+ P + I+
Sbjct: 576 HDENDESTLDDH--GDLEFQVESTGALLSLQSAVSHLNHFCSILPNSYRVSHLPIYDIDP 633
Query: 588 ---------------------EMGICTLYLPNNCPIQ-TVIAQGNIKTLKQAA----CLE 621
G CT+ LP P + V + KQ+A
Sbjct: 634 PDMPEGWHSFEHKSNVPPYPGPFG-CTVTLPRLLPSELRVFSVKREYPSKQSAIQHVAFN 692
Query: 622 ACKKLHQIGALTDNLLP-DIVVEKH----------DAQKR-GNEPYNAEHPIYFPPELVN 669
A L+ L DNLLP V+E++ D +KR G + + P
Sbjct: 693 AYLALYNAKLLNDNLLPLTSVIEENLEEEVKALLRDVEKRSGTATVRGQLDPWIP----- 747
Query: 670 QSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT-ELESEIKKVNFDLEVERGRLTVN 728
TKI + EL + S R + L T E E+ + L RG + V
Sbjct: 748 -----TKINNKWWSTELV--VDGLPSLRMLTLVKPTISAEQEMPTLYHPL---RGEMKVR 797
Query: 729 LKHLGRIQLIPNQV 742
L+HLG L P +
Sbjct: 798 LRHLGIANLSPGDL 811
>gi|336378007|gb|EGO19166.1| hypothetical protein SERLADRAFT_443209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1489
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 224/483 (46%), Gaps = 66/483 (13%)
Query: 916 PSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNV 974
P++ + L P R+++ + + + +PSI+ L + ++L++ L + +
Sbjct: 958 PAEKTVLLLPRYTRVVLLSPAETEYAQI--LPSIIRHLSVMTTVISLRDTLFTGTPLSKI 1015
Query: 975 TIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERI 1034
+P + A+T Q + E LETLGD LK+ S L + + HEG L+ +K+
Sbjct: 1016 PLPLLTT--ALTAPVSQGLINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHG 1073
Query: 1035 ISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKV 1094
+SNA L K +KL +I + F P+ W + N+D + ++ V G
Sbjct: 1074 VSNAQLAKNAVLKKLYRWIIRDRFTPRKWT---PRYCTPPQNEDQI--KEEVEVEGSDSR 1128
Query: 1095 KSKTV---------ADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA 1145
KS+ V ADVVE+LIGA GG ++G+ G+ +++ + + +
Sbjct: 1129 KSRAVIEELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGLGLEWWGLAKCVETALSV 1188
Query: 1146 ERLVN-----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
+ V +E +L Y+F LL+EALTH S+ Y+R+EFLGD++LD +
Sbjct: 1189 VETTDDFPAQVTDVELMLGYNFTRKLLLIEALTHASHQFDTRTVSYERMEFLGDSILDMI 1248
Query: 1201 ITVYLYN-KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH------------------- 1240
IT YLY+ G SPG++ +S+ VN A +++ L
Sbjct: 1249 ITDYLYHVPGKGYSPGHMHMRKSSVVNTHFLAFICLRNSLKVDTSMPGPNHEGRITLNTQ 1308
Query: 1241 -------KHILHASHELYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALG 1283
+ +LH+SH + + T + K L S F W ++T PK
Sbjct: 1309 SQEIYLWQCLLHSSHTILEDQKTTFSRYNKVKAQIEDALQNDSIFPWAALTKLQAPKFFS 1368
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIR-----PLLEPMITPETMRFHPVRELTEYCQKNHF 1338
D+IESL GA ++DSG N VV + +R P LE ++ + HPV ++ + Q+ +
Sbjct: 1369 DMIESLIGAAYLDSGGNINVVREILRKLGILPTLERIVRDDVDVLHPVSRVSLWTQREYK 1428
Query: 1339 SMK 1341
+++
Sbjct: 1429 TIE 1431
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 108/205 (52%), Gaps = 22/205 (10%)
Query: 6 MESDTTEEVSADTLPFA--RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL 63
ME + + S TL + R YQ E L+ +LK N I+ +TGSGKT IAI+ ++ A
Sbjct: 1 MEEPSDQAPSPSTLALSQTRGYQQEMLDASLKGNIIIAQDTGSGKTRIAILRMKIEAEC- 59
Query: 64 RKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEV 122
+P+ V+ FL P V L QQA+ IK+ + VG G W + A W+ + +H +
Sbjct: 60 -EPNK-VSWFLAPTVALCQQQADVIKLDLPVSVGMISGACEPIQWKESALWRGVLQRHRI 117
Query: 123 LVMTPQILLDGLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRL-LETGD--- 177
LV TPQ+LLD LR Y L I +LI DE HHA H Y CIM EFY +L + D
Sbjct: 118 LVTTPQVLLDALRHGYINLGRDIGLLIFDEAHHATDNHPYNCIMKEFYFKLPVRQSDLDD 177
Query: 178 -----------SNLPRIFGMTASPI 191
+ P + G+TASPI
Sbjct: 178 AISRGVQRKFRNERPMVLGLTASPI 202
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 185/434 (42%), Gaps = 78/434 (17%)
Query: 369 TEKIVCLIESLLEYRGV-----EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
+EK+ L++SLL+ + E I+FV R + L +L+ ++ +
Sbjct: 392 SEKVKVLVQSLLDEKAWAESHNEPYSGIVFVTRRDVVLALTEVLAHHPETSQRFRVGCLL 451
Query: 424 GNNSGIQCQS---------RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
G++ +S ++ Q + +FR G +N+I+AT++ EEGLD+Q+C VI +D
Sbjct: 452 GSSDSAYRRSFLDITRTLLKQSQANTLLDFRSGDINLIIATAVAEEGLDIQACGNVIRWD 511
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-----RLENYLAS--GNKMRKEVLS 527
+ S+ QSRGRAR + S ++LM ++G Q +LE + N R +
Sbjct: 512 APNNMASWAQSRGRARRERSSFVLMFQAGSDDKQQVMKWEQLEKQMMDLYSNDQRDTGNT 571
Query: 528 HASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK 587
H S L++H G+ + VESTG + +L S+VS + +CS LP+ P + I+
Sbjct: 572 HDENDESTLDDH--GDLEFQVESTGALLSLQSAVSHLNHFCSILPNSYRVSHLPIYDIDP 629
Query: 588 ---------------------EMGICTLYLPNNCPIQ-TVIAQGNIKTLKQAA----CLE 621
G CT+ LP P + V + KQ+A
Sbjct: 630 PDMPEGWHSFEHKSNVPPYPGPFG-CTVTLPRLLPSELRVFSVKREYPSKQSAIQHVAFN 688
Query: 622 ACKKLHQIGALTDNLLP-DIVVEKH----------DAQKR-GNEPYNAEHPIYFPPELVN 669
A L+ L DNLLP V+E++ D +KR G + + P
Sbjct: 689 AYLALYNAKLLNDNLLPLTSVIEENLEEEVKALLRDVEKRSGTATVRGQLDPWIP----- 743
Query: 670 QSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRT-ELESEIKKVNFDLEVERGRLTVN 728
TKI + EL + S R + L T E E+ + L RG + V
Sbjct: 744 -----TKINNKWWSTELV--VDGLPSLRMLTLVKPTISAEQEMPTLYHPL---RGEMKVR 793
Query: 729 LKHLGRIQLIPNQV 742
L+HLG L P +
Sbjct: 794 LRHLGIANLSPGDL 807
>gi|390603552|gb|EIN12944.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1524
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 243/535 (45%), Gaps = 69/535 (12%)
Query: 922 ELPPELCRIIMAPISLSTFYSFT--------FVPSIMHRLQSLLLAVNLKNMLLDHCMQN 973
E+P + I+ P +T + +PSI+ RL + A +L+ ML +
Sbjct: 949 EVPSSDAKPILLPADAATAILLSQAESEYALLLPSILRRLTVTMTAASLREMLF-LSPRL 1007
Query: 974 VTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKER 1033
+IP + AIT E + + LETLGD+ LK+ AS L Y HEG LS KK+
Sbjct: 1008 RSIPLDLLTAAITAPVSGEIRNYQRLETLGDTALKFMASISLLTDYPLWHEGYLSKKKDH 1067
Query: 1034 IISNAALCKLGCEQKLPGFIRTESFDPKMWIIP----GDNSGSYELNDDSLFNGRKIYVT 1089
++N L K+ ++L ++ + F K W +SG + +S +
Sbjct: 1068 AVANVRLAKIALSKELYRWMIRDRFIVKKWRPKLAEWQKSSGDEKKMPESEVDTNAEKGR 1127
Query: 1090 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP-------YQRQFQ 1142
G+ ++ K +AD+VEA+IGA G ++ + I +D P + Q
Sbjct: 1128 GQPQLSMKMLADIVEAIIGAAYLHGSFDLAVEVTRLFDIGIDIKTPPTCIERILVRAQAS 1187
Query: 1143 VHAERLV--NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL 1200
V R + + +E +L YSF + LLVEALTH S E Y+R+EFLGDAVLD +
Sbjct: 1188 VDDLREIPSQIDVVERMLGYSFNNKVLLVEALTHASLQGTEGTISYERMEFLGDAVLDMV 1247
Query: 1201 ITVYLYNKY-PGLSPGYL---------------------TDMRSASVNNDCYALSSVKHG 1238
+T YLY + PG++ T++ +A ++D +S+++
Sbjct: 1248 VTDYLYRRSDKNYGPGHMHLRKQAVVNMHFLAYVCFGISTELEAAMGSSDGVGNTSIRNS 1307
Query: 1239 -----LHKHILHASHEL-------YKRINITVDSFEKLSLGST-FGWESVTSF--PKALG 1283
L + +LH+SH + + R +F++ T F W ++T PKAL
Sbjct: 1308 SQRVYLWQCLLHSSHRILDDQSNAFTRYQRNRKAFDRAFQHDTLFPWTALTQLQAPKALS 1367
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIR-----PLLEPMITPETMRFHPVRELTEYCQKNHF 1338
D++ES GA+F+DSG + EV+ +R P LE ++ + HPV L+ + K
Sbjct: 1368 DVVESTIGAVFLDSGGSFEVIQNLLRRYRILPTLERIVDCDVDVQHPVSRLSIWAAKEKK 1427
Query: 1339 SMK---KPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+K RIS A+ ++ Q R+ E + K +A ++ ++ R
Sbjct: 1428 KVKYDFDKADGRIS--CAIYIDEQEEVRVTEPYRGRISQAEVKFMAAEQAIRKFR 1480
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 107/198 (54%), Gaps = 19/198 (9%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
E +TT + A LP +R+YQ E L +L +N ++ ++TGSGKT IA++ ++ Y +
Sbjct: 5 EPNTTTDNGA--LPVSRSYQREMLAESLHRNIVIAMDTGSGKTHIAVLRIK---YESERE 59
Query: 67 SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVM 125
S V+ F+ P V L QQ E + + VG G + D W D W+ + + V+V
Sbjct: 60 SKKVSWFVAPTVALCEQQREVLATALPVSVGIISGSLEPDQWKDARIWQRVIETNRVIVS 119
Query: 126 TPQILLDGLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLE--TGDSNL-- 180
TPQ+LLD +R Y + I +LI DE HHA KH Y IM EFY RL TG++ L
Sbjct: 120 TPQVLLDAMRHGYVDMGQHINLLIFDEAHHAADKHPYNLIMKEFYFRLPPRGTGETPLSA 179
Query: 181 --------PRIFGMTASP 190
P I G+TASP
Sbjct: 180 NSSINRERPMILGLTASP 197
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 54/316 (17%)
Query: 369 TEKIVCLIESLLEYR--GVED---IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
+EK+ LI SLL + ED ++FV R + + L +LS +K +
Sbjct: 396 SEKVNLLISSLLSEKLAAEEDHELFTGLVFVTRRDSVLALAEILSRHPRTRGAFKVGCLL 455
Query: 424 GNNSGIQCQS---------RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
G++ ++ ++ + Q E +E+ + G N+I++T++ EEG+D+Q+C V +D
Sbjct: 456 GSSDSVKRRAFLDITRELLVQSQTETLEDLKIGEKNLIISTAVAEEGIDIQACGAVFRWD 515
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ-----SRLEN-----YLASGNKMRKE 524
P + S+ QSRGRAR + S + LM + + RLE Y MR+
Sbjct: 516 PPPNMVSWAQSRGRARKKKSTFTLMFDDSGAHAKMVEQWERLEREMMNMYYDPSRDMRE- 574
Query: 525 VLSHASLPCSPLNNHMYGEDF--YHVESTGTIATLSSSVSLIYFYCSRLPS--------- 573
P + H+ ++ + V STG + TL S+V+ + +C+ +P
Sbjct: 575 -------PEDGMGEHIGVDEVLEFKVPSTGALLTLQSAVTHLNHFCACIPGGQHAPIYDI 627
Query: 574 ------DGYFKPTPKFHINKEMGICTLYLPNNCP-----IQTVIAQGNIKTLKQAACLEA 622
+G+ F + C + LP P + + + + A A
Sbjct: 628 DPPDLPEGWHATQTTFTPYQGPWGCVVILPRLLPRHLREFRVGREYTSKASARNHAAFFA 687
Query: 623 CKKLHQIGALTDNLLP 638
+ L++ G L D+LLP
Sbjct: 688 YRSLYEAGLLNDHLLP 703
>gi|380492403|emb|CCF34628.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1362
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 161/653 (24%), Positives = 293/653 (44%), Gaps = 100/653 (15%)
Query: 42 LETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHT-DLKVGKYW 100
++TGSGKT +A++ +R A + R S + FL P V L QQ ++ ++++
Sbjct: 1 MDTGSGKTQVAVLRIR--AEVERTSSKHIVWFLAPTVSLCAQQFAVLQSQIPEVQIKFLS 58
Query: 101 GDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKH 159
G+ VD W D TW E + ++V T QILLD L ++ ++ + +++ DE H+ GK
Sbjct: 59 GEDNVDAWSDQGTWDEVLHNVRIVVSTYQILLDALSHAFVRMERLSLVVFDEAHNCIGKS 118
Query: 160 QYACIMTEFYHRLLETGDSNLPRIFGMTASPI---KSKVSSSEQDYWQKIHDLETLMNSK 216
+ IMT FYH G ++P I G+TASP K++ + + + T+ S
Sbjct: 119 PGSKIMTVFYHEEKRRG-HHIPHILGLTASPTFGSKAEGIVTLEATLDAVCKSPTMHRSD 177
Query: 217 VYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYT--HLADELAMIELKHTRSLENLDLN 274
+ C + ++ F+ + + E+P +L + + L +++ + L++ +
Sbjct: 178 LLVCVRKPTMA-FVSYQPQECP-----ELPGSLRSLRKVIQSLDILDDPYVLHLQSEGTD 231
Query: 275 EAQAEL----------IRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQL 324
++ EL I+ +++ ++G+W ++++ W
Sbjct: 232 RSRRELMAVLESHDTYIQNQMTSFGRQANLIFRDIGIW------------ATEYYIW--- 276
Query: 325 DGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD---------------SKFNLDSGLLT 369
+I +F + A Q+ T++ + W + S+ +++ +L+
Sbjct: 277 -----VVISRFTA-ALQSQSTWLDT---WKKEEKEYLAMVLSQVECHCPSEHSINREVLS 327
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI 429
EK+ LIE L + + D+ I+F T S+L LL H + +Y G G
Sbjct: 328 EKVYTLIEQLSQDK--TDVIGIVFARERATV----SVLCHLLASHKLLRERYRIGAMVGT 381
Query: 430 -QCQSRKKQN---------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
Q Q+RK+ + + +FR G N+++ATS+LEEG+DV +CNLV FD +
Sbjct: 382 SQFQARKRDVWDLSRVEDLQSLHQFRTGKTNLLIATSVLEEGIDVPACNLVFCFDNPPNL 441
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNH 539
SFIQ RGRARM+ S LLM+ S +S + + A +M+ + +
Sbjct: 442 KSFIQRRGRARMRESK-LLMLHSSESIPK----EWEAMEAEMKSQYEEQERELERLQDME 496
Query: 540 MYGED---FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI----- 591
E + ++ TG + L ++ + C L + P + I K+
Sbjct: 497 DTEESKDMMFVIDRTGAVLDLDNAKQHLDHLCRILSPGEFIDWRPDYIIQKQDTSEAPYL 556
Query: 592 -CTLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
T+ LP+ P ++ +Q K+ + A A +A L++ G + DNLLP
Sbjct: 557 RVTVVLPSYLPSHVRKADSQKAWKSERNATKDAAFQAYVDLYKAGLVNDNLLP 609
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 222/500 (44%), Gaps = 77/500 (15%)
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPIS----LSTFYSF--T 944
P L R+ H ++L + + + PS R+ P + +ST Y+
Sbjct: 802 PYLALRKWSHRSDFLHRPQSDPDQSPSS-----GKPYNRVYPMPWAKVDTVSTDYARFGV 856
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSI+HR+++ L+A L LL ++ P + VL AI+T E + E +E LGD
Sbjct: 857 LIPSILHRIETHLVARELSAGLLRPLA--ISDPAL-VLTAISTGSAAEPTNYERIEFLGD 913
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWI 1064
S LK++ + + + E LLS KK+ I++N+ LCK + L FI T+ F + W
Sbjct: 914 SILKFSTTINVAALNPDWPERLLSFKKDGIVANSTLCKAAIKHGLDRFILTKPFTGQKW- 972
Query: 1065 IPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL---- 1120
DD L G + +++ +KT+AD+VEALIGA + GG L
Sbjct: 973 -------RPIYVDDVLHRGDE---KSTRRISTKTLADIVEALIGASMIDGGLEKALKCMS 1022
Query: 1121 IFLDRIGIK-VDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML 1179
IFL +I + +D E + LE L+ + F+ +LLV+++TH S+ L
Sbjct: 1023 IFLQQIKWRTLDDCRQALYDAAPPDVELPSTLEPLEQLVGHEFKKKALLVQSMTHASFTL 1082
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHG- 1238
C +RLEF+GD+VLDY+I L+ P LS + +++A VN D S++
Sbjct: 1083 GNTLGCLERLEFIGDSVLDYVIVSRLFAVTPPLSHQTMHLLKTAMVNGDFLGFLSLEQSV 1142
Query: 1239 --------------------------LHKHILHASHEL-YKRINIT----------VDSF 1261
L K + H S + + + ++ +DS
Sbjct: 1143 SQDEVVIGGDPTGKEPILRHSRFSLPLWKFMRHQSPAIGLEEVKVSKRYAGLRDQIIDSM 1202
Query: 1262 EKLSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPM 1315
E+ G T+ W + K DI ESL GA++VDSG C R V I L+ +
Sbjct: 1203 ER---GQTYPWALLARMQLRKFYSDIFESLLGAVYVDSGDLEVCARVVERFGILGYLDRI 1259
Query: 1316 ITPETMRFHPVRELTEYCQK 1335
+ HP EL K
Sbjct: 1260 LRDNVHALHPKEELGHLADK 1279
>gi|358380675|gb|EHK18352.1| hypothetical protein TRIVIDRAFT_47151 [Trichoderma virens Gv29-8]
Length = 1386
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 183/695 (26%), Positives = 291/695 (41%), Gaps = 131/695 (18%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP-FVAVFLVPKVVL 80
AR YQ+E LE +L++N IV ++TGSGKT +A++ ++S L P + F+ P V L
Sbjct: 3 ARAYQIEMLEQSLERNVIVAMDTGSGKTQVAVLRIKSE---LESCDPKKIVWFMAPTVSL 59
Query: 81 VPQQAEAIKMHTD-LKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ + +K+ + + G+ ++ W W + V+V TPQ+LLD L +Y
Sbjct: 60 CTQQKDVLKLQIPAVPMTLLAGNSAINAWGPEIWHTLLGTTRVVVSTPQVLLDALDHAYI 119
Query: 140 KLNMIKVLILDE--------------CHHARGKHQYACIMTEFYHRLLETGDSNLPRIFG 185
+N + +L+ DE H+ GK+ +M YH + G S +P I G
Sbjct: 120 TMNHLALLVFDEGKNKTADTVCLIYIAHNCIGKNPGGRVMLNHYHPCKQVGGS-VPSILG 178
Query: 186 MTASP-IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE 244
+TA+P I+S+ E L TC S ++ + + K K
Sbjct: 179 LTATPSIQSQPEDL-----------EALELLLDATCISPTLHRDEL------LKCVKRPT 221
Query: 245 IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
I H +Y +++ ++ LN+ EL K+ I+ Y L +
Sbjct: 222 IRHVIYNPGREDVMTPTMR--------SLNQVYLELDIKEDPYIH----YLLRDPTERNK 269
Query: 305 LKAAETISCYESDFFAWEQLDGF---GETIIKKFGSDASQALVTYVPSG----------- 350
AE I Y D + Q+ F + I K+ G A+ + S
Sbjct: 270 RALAEAIEKY--DTYTQNQMKSFRTRSKQICKQLGPWAADLYIEKAISAHLNRVEGDHEL 327
Query: 351 -AEWSIGDDSKF------------------NLDSGLLTEKIVCLIESLLEYRGVEDIRCI 391
+W I ++ K+ D +++K+ L+ LL E I
Sbjct: 328 PNQWWIDEEKKYLGQVYRRVNVQPLPKTPQTFDD--ISDKVDKLLIELLS--AEEPTVGI 383
Query: 392 IFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS--RKKQNEIVEE------ 443
IFVE T ++L+ELL + KY G G + RK E ++
Sbjct: 384 IFVEERATV----TMLAELLRVNQAIMAKYKIGTMFGTAAYATRRKAMYEFGDKTDYKDL 439
Query: 444 --FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
FR G +N+++ATS+LEEG+DV +CNLVI FD T SFIQ RGRAR ++S ++ +
Sbjct: 440 LNFRHGKINLLIATSVLEEGIDVPACNLVICFDTPTTSKSFIQRRGRARKRDSKLVIFFE 499
Query: 502 SGDSTTQSRLENYLASGNKMRK-------EV--LSHASLPCSPLNNHMYGEDFYHVESTG 552
LE ++ +M+K EV LS SP +D + V STG
Sbjct: 500 ----LESPALEKWITKEEEMKKLFDDEQREVRRLSQLEDSESP------SDDVFIVPSTG 549
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG----ICTLYLPNNCPI-----Q 603
++ S + +C L + P + I+KE C + LP P+
Sbjct: 550 ARLEFDNAKSHLEHFCRVLSPGEFVDSRPDYIIHKEPDSGSLTCVVLLPPFLPVSLRKHS 609
Query: 604 TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ A + K + A +A + L+ + DNL P
Sbjct: 610 SASAWQSEKNATKDAAYQAYRALYDAELVNDNLQP 644
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 216/467 (46%), Gaps = 55/467 (11%)
Query: 909 RQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLD 968
+ Q +P + LP + P+ + F +PSI+H L +++A L N +L
Sbjct: 861 KDQATSKPYARVYPLP--WATVDAIPVRHAQF--GMLIPSIIHELGVMIMAKELANNILR 916
Query: 969 HC-MQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
++N+ + V +AI + E + E +E LGDS LK+ ++ Y + EG L
Sbjct: 917 KVGIKNMDL----VRQAICARSASEPVNYERVELLGDSILKFFTCIRVAAEYPDYPEGYL 972
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIY 1087
S K++R+ISNA L K E KLP F+ T+ F + W ++ E+ + L
Sbjct: 973 SHKRDRLISNARLHKTALEFKLPRFLNTKPFTGQKWRPLYLDAVLDEVRQEGLEP----- 1027
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF---QVH 1144
+ ++K+ +KT+AD+VEALIG G + + + + ++ +V R+ +V
Sbjct: 1028 TSQKRKISTKTLADMVEALIGVSYVDGHLDKAVKCISLFLPETNWTSVENDRRNIFDKVP 1087
Query: 1145 AERLV--NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
A+ + + LE L+ YSF+ +LL+EALTH SY R +RLEF+GDAVLD +I
Sbjct: 1088 ADEPLPPTLEPLEGLIGYSFQKKALLIEALTHASYAAETGKRSLERLEFIGDAVLDNIIV 1147
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH---------------------- 1240
L+N P L + +++ VN D A +++ GL
Sbjct: 1148 TKLFNVKPELPHFRMHTLKTGLVNGDFIAFMTMERGLKLTEKIVTEDGTLKSEEMMSYLW 1207
Query: 1241 -------KHILHASHELYKR-INITVDSFEKLSLGSTFGWESVTSF-PKA-LGDIIESLA 1290
HI E KR + + +++ G+ + W + + PK D+ E++
Sbjct: 1208 TFMRHNSMHIGIEMKETMKRHAALRGEILDEMENGTHYPWALLAALNPKKFFSDVFEAIL 1267
Query: 1291 GAIFVDSG----CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
GA++VDSG C + ++ ++ + HP EL ++
Sbjct: 1268 GAVWVDSGSMVECEKVATRFGFLKYMDRLLRDKVHVQHPKEELGKWA 1314
>gi|449485409|ref|XP_004157159.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 132
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 96/114 (84%)
Query: 1281 ALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSM 1340
LGD+IESLAGAI+VDSG ++E+VF+SIRPLLEP+++PET++ HP REL E CQK ++ +
Sbjct: 15 VLGDVIESLAGAIYVDSGYDKEIVFRSIRPLLEPLVSPETLKKHPRRELNELCQKENYKL 74
Query: 1341 KKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
KK V SR++G++ VTVEV+ NGR+F+HT + D++T +KVA KEVLKSL+ ++P
Sbjct: 75 KKTVTSRVNGRSYVTVEVEVNGRIFKHTEISLDRETGEKVASKEVLKSLKEAYP 128
>gi|19072784|gb|AAL84637.1|AF484523_1 endoribonuclease Dicer [Mus musculus]
Length = 361
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 138/259 (53%), Gaps = 28/259 (10%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 108 FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 167
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFG 1271
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F K L G
Sbjct: 168 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQG 223
Query: 1272 WES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+S PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I
Sbjct: 224 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEK 283
Query: 1319 ETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKK 1375
+ PVREL E + FS P GK VTVEV G+ + +
Sbjct: 284 FSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYR 337
Query: 1376 TAKKVACKEVLKSLRASFP 1394
AK A + L+SL+A+ P
Sbjct: 338 IAKSAAARRALRSLKANQP 356
>gi|89114020|gb|ABD61601.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.0 bits (92), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114046|gb|ABD61614.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 41.6 bits (96), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNA-RIVHTKSGPLCTCKIHNSLVCTPH 843
P+ G+ IDW+ + + N +TM A K+ P + +++V +
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTMPRAVPDKERKAQPFDAQRFQDAVVMPWY 1083
Query: 844 NGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN----- 894
Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1084 RNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDHTS 1141
Query: 895 GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFT 944
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1142 ARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRTAV 1199
Query: 945 FVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1200 CLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114042|gb|ABD61612.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.8 bits (94), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 1081
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1082 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 1139
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1140 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 1197
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1198 AVCLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114034|gb|ABD61608.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.0 bits (92), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|395330621|gb|EJF63004.1| hypothetical protein DICSQDRAFT_83832 [Dichomitus squalens LYAD-421
SS1]
Length = 1330
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 208/473 (43%), Gaps = 72/473 (15%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PE+C P S TF + +PSIM++++S LL L L N I ++L A
Sbjct: 763 PEMCYKFTIPAS--TFRTLWLMPSIMNKIESYLLVKELNARLF----HNAVIEQ-QLLIA 815
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
++T +F+ E LE LGDSFLK AS + T + H G L ++ IISN L +
Sbjct: 816 LSTPAAWTEFNYERLEFLGDSFLKVVASNFCYATMPSVHVGDLHQARQSIISNKVLQEGA 875
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKK----------- 1093
+P +++ + F K+W P + E NG + +TG
Sbjct: 876 TRVGVPSYVQHKRFVAKLWQPPLSTANVAEELKTEGGNG-DVEMTGEAPEKKDKGKRSKK 934
Query: 1094 -----------VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV--------- 1133
+ K +ADVVEA++ A +GG V L R+ + + V
Sbjct: 935 QRQLDEQNTLWMGDKIIADVVEAILAASFLSGGHEVALEAARRLQVPIPNVAQWSDYARL 994
Query: 1134 ----NVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 1189
Q A + + LE L N F LL +ALTH S Y RL
Sbjct: 995 AAHHAAREQTVVMASAPSRMTISVLEKLFNSKFNRLDLLGQALTHTSAFSGAEGTSYDRL 1054
Query: 1190 EFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRS--ASVNNDCYALSSVKHGLHKHILHAS 1247
EF+GDA+LD+L++ Y++ ++P LSPG LT +++ A V+N A V GL +++ S
Sbjct: 1055 EFIGDAILDFLVSRYIWERHPYLSPGGLTMLKANGAMVSNQTLAAFCVHVGLQQYLRMES 1114
Query: 1248 HELYKRINITVDSFEKL------------SLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
+L I +D E+L L + + PK L D++ESL GA++V
Sbjct: 1115 KDLSTAIQKYIDFLEELRKKEYDFASREQRLPGQYWLDMPMEPPKCLSDVVESLIGALYV 1174
Query: 1296 -----DSGCNR--EVVFQSIRPLLEPMITPETMRFHPVREL-----TEYCQKN 1336
+ G R E VF +P LE + +T+ +P L E CQ N
Sbjct: 1175 SDNFFEVGVGRFFETVF---KPFLEAHVRLQTLSTNPKITLLELLQAEGCQNN 1224
>gi|198421916|ref|XP_002122382.1| PREDICTED: similar to rCG20888 [Ciona intestinalis]
Length = 2053
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 177/391 (45%), Gaps = 66/391 (16%)
Query: 1056 ESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG 1115
E F W P D SG N D L + + + + K++AD VEAL+GA+L+T G
Sbjct: 1674 EDFVIDTWT-PVDASGKPLNNSDPLM----LDLHTQHSLADKSIADCVEALLGAYLTTCG 1728
Query: 1116 ENVGLIFLDRIGIKV----------------DFVNVPYQRQFQVHAER-------LVNVR 1152
+ L +G+ V ++ P + + + LV +
Sbjct: 1729 HRSAQLLLCHLGLNVLPKVAQAETSKTVDRFGYLTPPTNKMLECRPNQQNKLDQLLVALS 1788
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
E +NY+F++ + L++A TH SY + CYQRLEFLGDAVLD+LIT +L+N
Sbjct: 1789 GFERKINYTFKNKAYLLQAFTHASYYYNTVTDCYQRLEFLGDAVLDFLITRHLFNDERHH 1848
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL---------------------- 1250
SPG LTD+RSA VNN +A +V + HK+ S EL
Sbjct: 1849 SPGALTDLRSALVNNTIFASLAVHYDFHKYFKSISPELHHIIEDFVMYQQKQEDAQGMDA 1908
Query: 1251 -----YKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
Y R+ I S L G PKALGDI ES+AGAI++DSG + V+
Sbjct: 1909 HLMRDYDRVEIVAPS--SLEKDEEEGENEDVEVPKALGDIFESVAGAIYMDSGMDLSSVW 1966
Query: 1306 QSIRPLLEPMIT--PETMRFHPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
+ ++ P+I + PVREL E + FS + R GK VTVE+ G
Sbjct: 1967 KVYSVMMLPLIEKFSACVPRSPVRELLEMEPETAKFSCAE---KRYDGKVRVTVEIIGKG 2023
Query: 1363 RLFEHTFLDADKKTAKKVACKEVLKSLRASF 1393
R + + AK A + L+ L+ F
Sbjct: 2024 RF---KGVGRSYRIAKSAAARRALRYLKGPF 2051
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 162/673 (24%), Positives = 273/673 (40%), Gaps = 134/673 (19%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWK-------TKYIAGNNSGIQCQS--RKKQNEIV 441
I+FVE A++LQ LL EL K T + G G+ S + KQ E++
Sbjct: 527 IVFVEERYVAMMLQRLLRELSKEDKNLKHVSSSHLTPGVEGERRGVDPASMDQSKQEEVL 586
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
+FR N+++ T LE+ + CNL++ FD ++ S+ +S+ RAR Q S Y+++V+
Sbjct: 587 RKFRSHESNLLICTGDLEDCAYMPKCNLIMRFDVPKSYRSYAESKSRARAQTSAYVMLVR 646
Query: 502 SGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE--------STGT 553
T +S L K+ K +L P LN + +E + T
Sbjct: 647 ---ETEKSHFMEKLQEYKKIEKVLLG----PDWSLNEVYDNNEDDDIEEMIPPYILNRNT 699
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI-------NKEMGICTLYLPNNC----PI 602
+ ++V ++ YC+RLPSD + +P+ + + M +C L LP N P+
Sbjct: 700 QVNMKNAVRIVNRYCNRLPSDPFTHLSPRCEVVEVLNDGDSPMFMCILQLPINSHVREPV 759
Query: 603 QTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP---DIV--VEKHDAQKR------- 650
Q ++ ++ +QA +E CK L++ G L +NL+P + V E+ D KR
Sbjct: 760 QGIVMP-TLQLAQQAVAMETCKVLYEAGELDENLMPIGKETVKYAEELDPWKREVSSITG 818
Query: 651 ------GNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMR 704
+ YN + P+++ I Y IE+K +N +L
Sbjct: 819 RPGSTKKRQTYNKD-----SPQILRSCLPQPDINLFIYEIEMK--------IKNPLL--- 862
Query: 705 TELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP---------NQVLLCRRF-QITLFR 754
EL +K+ F E R + K + +I P ++ CR F Q++ +
Sbjct: 863 DELNVRRRKLFFPEETSRCFGILTTKPIPQIPGFPIFTRSGEESAKLKFCRGFVQLSAQQ 922
Query: 755 VIMDHNLDKLNEILDGFELRDNLEIDYLLLP-----STGQL--IDWKTVATVLFPRDNGS 807
+ KL I + D L +D + L ST QL + V T N S
Sbjct: 923 I-------KLVRIFHRYVFSDMLRVDRVPLSFQPEKSTSQLLVVVLNKVGTNKSSTANSS 975
Query: 808 KHNMNCSTMFNAR-----IVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNA--- 859
+ N++ S M I KS P K++ N Q+Y V+ +
Sbjct: 976 QLNIDWSFMMKTESKRRVIEKMKSDPWYKHKMNEQNKVFVFNRQLYEDGVVVAKYRSCDQ 1035
Query: 860 -------------NSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLS 906
L + + ++ +Y+ +YG+ + ++PLL+ N L+
Sbjct: 1036 PNRFYVAELKDDMTPLSSFPSSEYESFLHYYQLKYGLDIRCLKQPLLDVDHTSSRLNLLT 1095
Query: 907 KCRQQKQK---------EPSKISFE-------LPPELCRIIMAPISLSTFYSFTFVPSIM 950
R QK E + +E L PELC + PI S + +PS++
Sbjct: 1096 P-RHLNQKGKALPMSSLEKKRAKYESLHNRQILVPELCEV--HPIPASLWRKAVCLPSVL 1152
Query: 951 HRLQSLLLAVNLK 963
+R+ LL+A L+
Sbjct: 1153 YRVNQLLIAEELR 1165
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSPFVAVFLVPKVV 79
R YQ+E LE A KQNTI+ L GK + M LR +P AV L+ +
Sbjct: 27 RPYQIELLECAAKQNTIICLNGDFGKCFMYTMFLREVIIKHNGKLNNAPKFAVLLLKEDC 86
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+V +Q+E ++ H D+ + +M F D + ++ H+VLV TP++ + L +S +
Sbjct: 87 MVNEQSELLRSHLDVDIISCTHNMTDSFTD-ESLQQLCHDHQVLVCTPEVFVKLLSISLY 145
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN--LPRIFGMTASPIKSKVSS 197
+ ++I D+CH I ++++ D N P I G+T+S + + +++
Sbjct: 146 IAQYMDLVIFDDCH-------LVNIEMHPIRKIMKILDENRYTPMILGLTSSLLNNNITA 198
Query: 198 SEQDYWQKIHDLETLMNSKVYTCA 221
E + + IH +ET+M+ K T
Sbjct: 199 DELN--KCIHSMETVMHCKAQTAT 220
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + L+ TY +HEG LS + + +SN L
Sbjct: 1461 ILQALTLSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSNYNL 1520
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
++G + L G + FDP + W+ G
Sbjct: 1521 YRIGKQFGLAGKMTGLIFDPTVNWLPTG 1548
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + +TVYLY YP G L+ MRS V+N
Sbjct: 1477 ERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSN 1517
>gi|89114050|gb|ABD61616.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTSRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.8 bits (94), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 1081
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1082 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 1139
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1140 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 1197
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1198 AVCLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114044|gb|ABD61613.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEKRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 1081
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1082 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 1139
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1140 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 1197
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1198 AVCLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|328696730|ref|XP_003240109.1| PREDICTED: endoribonuclease dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1648
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 211/469 (44%), Gaps = 92/469 (19%)
Query: 962 LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
L ++ ++ QN+ +L+ IT + F+ E +ET GDSFLK+A S LF + +
Sbjct: 1136 LSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPS 1195
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM-WI---------------- 1064
++EG+L+ K +++ N L +G L ++ FDP M WI
Sbjct: 1196 DNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEE 1255
Query: 1065 ------------IPGDNSGSYELNDDSLF------------------------------N 1082
IP DN + L+D++ +
Sbjct: 1256 GNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGH 1315
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PY 1137
+ ++ V K VAD VE+LIG ++ G VG L +GI F++ P
Sbjct: 1316 SQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDTFKPKPI 1375
Query: 1138 QRQFQ--VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
+ ++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA
Sbjct: 1376 DDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-FSECYQRLEFLGDA 1434
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
+LD+LIT Y+ +PG +TD+RS+ VNN +A S + GLH+ IL S ++ + I+
Sbjct: 1435 ILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAID 1494
Query: 1256 ITVDSFEK------------LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
+ +K + + ESV PK LGD+ ESL AI++D CNR++
Sbjct: 1495 RFYEHQQKNNHKIGQEVLYLIEESDCYAAESV-DVPKVLGDLFESLIAAIYLD--CNRDL 1551
Query: 1304 VFQSIRPLLEPMITPETMRF------HPVRELTEYCQKNHFSMKKPVAS 1346
F + + + E F +P+R L E + +FS KP AS
Sbjct: 1552 NF--VWAICYRFLEKEIKEFCDNVPKNPIRILHETKLQPNFS--KPDAS 1596
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQLE LE+ K NTI++L TGSGKT IA ML++S L KP F+V V
Sbjct: 14 RKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQGKKWTFFIVQSVP 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ H +G + GDM VDFW W E + K +LVMT QI L+ LR Y
Sbjct: 74 LVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTAQIYLNNLRHGYM 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ +LI DECHHA H + IM + L+T + PRI G+TA+ I + + +
Sbjct: 134 HIKDANLLIFDECHHAVALHPFKQIMQVLHDTDLKTDER--PRILGLTATLINANTKNVK 191
Query: 200 QD 201
++
Sbjct: 192 EE 193
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 140/265 (52%), Gaps = 22/265 (8%)
Query: 390 CIIFVERVITAIVLQSLLSELLPR--HCTWKTKYIAGNNSGI---QCQS----RKKQNEI 440
C++FV+R TA +L + + + ++I G GI C+ +++ N+I
Sbjct: 382 CLVFVDRRTTAKILYHYIKDYIEEFNQVNIVCEFIVGA-RGIFSPDCKEMVYKKQQNNDI 440
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++F ++NV++ + +LEEG+D+Q+CN VI +D + S+IQS+GRAR +S ++LMV
Sbjct: 441 IKKFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFILMV 500
Query: 501 KSGDSTTQSRLENYLASGNKMRKEVLS-HASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
+ Q + + NKM +E++ NN + +H E+ + T
Sbjct: 501 PN-----QLKFQKTQTEYNKMEEEIVKLLVDNDIDDENNDEKMTEVFHTETDRALLTHEI 555
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLY---LPNNCPIQTVIAQ---GNIKT 613
++S+I YC LP D + +P++++ + + Y LP N I+T I N K
Sbjct: 556 AISIINRYCYSLPQDRFTDLSPEWYMAQNHNMSKKYKLKLPINSVIKTPIDGLFCTNKKN 615
Query: 614 LKQAACLEACKKLHQIGALTDNLLP 638
K++A AC L++IGAL +NL+P
Sbjct: 616 AKKSAAFNACIALYKIGALDENLMP 640
>gi|89114030|gb|ABD61606.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.0 bits (92), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114022|gb|ABD61602.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.0 bits (92), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114038|gb|ABD61610.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.8 bits (94), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 1081
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1082 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 1139
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1140 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 1197
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1198 AVCLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|328696734|ref|XP_003240110.1| PREDICTED: endoribonuclease dcr-1-like isoform 3 [Acyrthosiphon
pisum]
Length = 1630
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 211/469 (44%), Gaps = 92/469 (19%)
Query: 962 LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
L ++ ++ QN+ +L+ IT + F+ E +ET GDSFLK+A S LF + +
Sbjct: 1118 LSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPS 1177
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM-WI---------------- 1064
++EG+L+ K +++ N L +G L ++ FDP M WI
Sbjct: 1178 DNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEE 1237
Query: 1065 ------------IPGDNSGSYELNDDSLF------------------------------N 1082
IP DN + L+D++ +
Sbjct: 1238 GNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGH 1297
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PY 1137
+ ++ V K VAD VE+LIG ++ G VG L +GI F++ P
Sbjct: 1298 SQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDTFKPKPI 1357
Query: 1138 QRQFQ--VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
+ ++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA
Sbjct: 1358 DDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-FSECYQRLEFLGDA 1416
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
+LD+LIT Y+ +PG +TD+RS+ VNN +A S + GLH+ IL S ++ + I+
Sbjct: 1417 ILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAID 1476
Query: 1256 ITVDSFEK------------LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
+ +K + + ESV PK LGD+ ESL AI++D CNR++
Sbjct: 1477 RFYEHQQKNNHKIGQEVLYLIEESDCYAAESV-DVPKVLGDLFESLIAAIYLD--CNRDL 1533
Query: 1304 VFQSIRPLLEPMITPETMRF------HPVRELTEYCQKNHFSMKKPVAS 1346
F + + + E F +P+R L E + +FS KP AS
Sbjct: 1534 NF--VWAICYRFLEKEIKEFCDNVPKNPIRILHETKLQPNFS--KPDAS 1578
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQLE LE+ K NTI++L TGSGKT IA ML++S L KP F+V V
Sbjct: 14 RKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQGKKWTFFIVQSVP 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ H +G + GDM VDFW W E + K +LVMT QI L+ LR Y
Sbjct: 74 LVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTAQIYLNNLRHGYM 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ +LI DECHHA H + IM + L+T + PRI G+TA+ I + + +
Sbjct: 134 HIKDANLLIFDECHHAVALHPFKQIMQVLHDTDLKTDER--PRILGLTATLINANTKNVK 191
Query: 200 QD 201
++
Sbjct: 192 EE 193
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 140/265 (52%), Gaps = 22/265 (8%)
Query: 390 CIIFVERVITAIVLQSLLSELLPR--HCTWKTKYIAGNNSGI---QCQS----RKKQNEI 440
C++FV+R TA +L + + + ++I G GI C+ +++ N+I
Sbjct: 382 CLVFVDRRTTAKILYHYIKDYIEEFNQVNIVCEFIVGA-RGIFSPDCKEMVYKKQQNNDI 440
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++F ++NV++ + +LEEG+D+Q+CN VI +D + S+IQS+GRAR +S ++LMV
Sbjct: 441 IKKFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFILMV 500
Query: 501 KSGDSTTQSRLENYLASGNKMRKEVLS-HASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
+ Q + + NKM +E++ NN + +H E+ + T
Sbjct: 501 PN-----QLKFQKTQTEYNKMEEEIVKLLVDNDIDDENNDEKMTEVFHTETDRALLTHEI 555
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLY---LPNNCPIQTVIAQ---GNIKT 613
++S+I YC LP D + +P++++ + + Y LP N I+T I N K
Sbjct: 556 AISIINRYCYSLPQDRFTDLSPEWYMAQNHNMSKKYKLKLPINSVIKTPIDGLFCTNKKN 615
Query: 614 LKQAACLEACKKLHQIGALTDNLLP 638
K++A AC L++IGAL +NL+P
Sbjct: 616 AKKSAAFNACIALYKIGALDENLMP 640
>gi|328696732|ref|XP_001945890.2| PREDICTED: endoribonuclease dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1691
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 211/469 (44%), Gaps = 92/469 (19%)
Query: 962 LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQN 1021
L ++ ++ QN+ +L+ IT + F+ E +ET GDSFLK+A S LF + +
Sbjct: 1179 LSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPS 1238
Query: 1022 NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM-WI---------------- 1064
++EG+L+ K +++ N L +G L ++ FDP M WI
Sbjct: 1239 DNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEE 1298
Query: 1065 ------------IPGDNSGSYELNDDSLF------------------------------N 1082
IP DN + L+D++ +
Sbjct: 1299 GNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGH 1358
Query: 1083 GRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI-KVDFVNV----PY 1137
+ ++ V K VAD VE+LIG ++ G VG L +GI F++ P
Sbjct: 1359 SQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDTFKPKPI 1418
Query: 1138 QRQFQ--VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA 1195
+ ++ L LE + YSF+ LL +ALTH +Y CYQRLEFLGDA
Sbjct: 1419 DDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTHPTYQFG-FSECYQRLEFLGDA 1477
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN 1255
+LD+LIT Y+ +PG +TD+RS+ VNN +A S + GLH+ IL S ++ + I+
Sbjct: 1478 ILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAID 1537
Query: 1256 ITVDSFEK------------LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
+ +K + + ESV PK LGD+ ESL AI++D CNR++
Sbjct: 1538 RFYEHQQKNNHKIGQEVLYLIEESDCYAAESV-DVPKVLGDLFESLIAAIYLD--CNRDL 1594
Query: 1304 VFQSIRPLLEPMITPETMRF------HPVRELTEYCQKNHFSMKKPVAS 1346
F + + + E F +P+R L E + +FS KP AS
Sbjct: 1595 NF--VWAICYRFLEKEIKEFCDNVPKNPIRILHETKLQPNFS--KPDAS 1639
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQLE LE+ K NTI++L TGSGKT IA ML++S L KP F+V V
Sbjct: 14 RKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQGKKWTFFIVQSVP 73
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QQA ++ H +G + GDM VDFW W E + K +LVMT QI L+ LR Y
Sbjct: 74 LVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTAQIYLNNLRHGYM 133
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ +LI DECHHA H + IM + L+T + PRI G+TA+ I + + +
Sbjct: 134 HIKDANLLIFDECHHAVALHPFKQIMQVLHDTDLKTDER--PRILGLTATLINANTKNVK 191
Query: 200 QD 201
++
Sbjct: 192 EE 193
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 140/265 (52%), Gaps = 22/265 (8%)
Query: 390 CIIFVERVITAIVLQSLLSELLPR--HCTWKTKYIAGNNSGI---QCQS----RKKQNEI 440
C++FV+R TA +L + + + ++I G GI C+ +++ N+I
Sbjct: 382 CLVFVDRRTTAKILYHYIKDYIEEFNQVNIVCEFIVGA-RGIFSPDCKEMVYKKQQNNDI 440
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++F ++NV++ + +LEEG+D+Q+CN VI +D + S+IQS+GRAR +S ++LMV
Sbjct: 441 IKKFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFILMV 500
Query: 501 KSGDSTTQSRLENYLASGNKMRKEVLS-HASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
+ Q + + NKM +E++ NN + +H E+ + T
Sbjct: 501 PN-----QLKFQKTQTEYNKMEEEIVKLLVDNDIDDENNDEKMTEVFHTETDRALLTHEI 555
Query: 560 SVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLY---LPNNCPIQTVIAQ---GNIKT 613
++S+I YC LP D + +P++++ + + Y LP N I+T I N K
Sbjct: 556 AISIINRYCYSLPQDRFTDLSPEWYMAQNHNMSKKYKLKLPINSVIKTPIDGLFCTNKKN 615
Query: 614 LKQAACLEACKKLHQIGALTDNLLP 638
K++A AC L++IGAL +NL+P
Sbjct: 616 AKKSAAFNACIALYKIGALDENLMP 640
>gi|89114036|gb|ABD61609.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEXRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATXELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.4 bits (93), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 1081
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1082 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 1139
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1140 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 1197
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1198 AVCLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114024|gb|ABD61603.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
>gi|89114040|gb|ABD61611.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--RKK 436
D C +I+ + TA VL LL+E+ R C + T +A + + ++
Sbjct: 434 DTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRR 493
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR + +
Sbjct: 494 QEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYH 553
Query: 497 LLMV 500
+++V
Sbjct: 554 VILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTK---SGPLCTCKIHNSLVCT 841
P+ G+ IDW+ + + N +TM R V K + P + +++V
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTM--PRAVPDKERQAQPFDAQRFQDAVVMP 1081
Query: 842 PHNGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1082 WYRNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDH 1139
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1140 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRT 1197
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1198 AVCLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|89114028|gb|ABD61605.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEKFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.0 bits (92), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|134079420|emb|CAK40801.1| unnamed protein product [Aspergillus niger]
Length = 1379
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 179/719 (24%), Positives = 299/719 (41%), Gaps = 131/719 (18%)
Query: 8 SDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLI---------------A 52
+D+T +++ R YQLE L +LK+N IV + TG+GKT +
Sbjct: 9 ADSTPGTTSNMELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVYDESYYVFDHMANRSN 68
Query: 53 IMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT 112
+LR A + + S L P V L QQ ++ + G + D A
Sbjct: 69 RAILRILADIDKGNSDKFVWLLCPTVALSEQQY--------IQYATVFLPSGAE--DKAI 118
Query: 113 WKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL 172
W +S ++ V T Q+L D L + KL+ + +LI DE HH + H IM YH+
Sbjct: 119 WDNALSGIKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHCKKDHVANKIMQVHYHKQ 178
Query: 173 LETGDSNLPRIFGMTASPIKSKVSSSE-------------QDYWQKIHDLET----LMNS 215
++G NLP+I G+TASPI S +SS E + Y+ ++ L
Sbjct: 179 HQSGVQNLPKILGLTASPILSDLSSLEIVESNLGSICKTPRQYYAQLLQFTNRPLILPRL 238
Query: 216 KVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNE 275
YT + SV + + DE+P + ++ +LKH R
Sbjct: 239 PTYTIPNCSVKAPILEKLCGILS--SEDEVPSS------SKMKSKQLKHIRRF------- 283
Query: 276 AQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKF 335
+ IN ELG+W A + + F G +T I +
Sbjct: 284 ------MQTSESINQ-------ELGIWAATEYMRKSIMH----FKESMRMGAEKTNISNY 326
Query: 336 GSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFV 394
G D + ++T + + S + ++ CL++ L + YR E ++FV
Sbjct: 327 GKDFAMEILTRLGKLQDCSPA------IQPEEISPMCQCLLDELSKAYR--EGFCGLVFV 378
Query: 395 ERVITAIVLQSLLSE------------LLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVE 442
+ T + L+ L+ + T +K GN I + Q E +E
Sbjct: 379 TQRATVLALKWLIENHPLTSHLFTCGTFIGMSTTQYSKTELGNLHDI-----RNQTETLE 433
Query: 443 EFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV-- 500
+FR+G +N+I+ T LEEG+DV +CN V+ F+ ++ SFIQ RGRAR +NS +++++
Sbjct: 434 KFRQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRGRARRENSQFIIIMED 493
Query: 501 KSGDSTTQ----SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH--VESTGTI 554
+SG + +E N R+++ P + L+ Y ++ TG
Sbjct: 494 ESGPRYLKRLEMEEIELVQKLQNAERRQI------PANELDFDKYERISLSLDIDRTGAQ 547
Query: 555 ATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI---NKEMGICTLYLPNNCP-----IQTVI 606
+ +V +Y +CS+LP+ Y P F N + LP+N +
Sbjct: 548 LIMREAVGYLYNFCSKLPAQLYVSNKPLFTYERNNYGRFRAVVKLPSNLDPSLQSFSSSR 607
Query: 607 AQGNIKTLKQAACLEACKKLHQIGALTDNLLP---------DIVVEKHDAQKRGNEPYN 656
+ +K ++ A L+A K L+Q G + D L+P DI+ H + + +P+
Sbjct: 608 SWSRLKYAREDAALQAYKALYQAGLVNDYLVPTQVSDHLEGDIIFRSHYSIQNQLDPWQ 666
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 192/436 (44%), Gaps = 75/436 (17%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IPTIKVLEAITTKKCQEDFHLESLE 1000
F PSI H ++ ++A L+ L +++VT I + + T+ + + F L L
Sbjct: 892 FTPSISHEVEVYMIAQILRQEL---SLRSVTPWQRIDLLAIAIRPTSIEHRATFRL--LA 946
Query: 1001 TLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP 1060
+GD+F+KY + QLF + HEGLLS K+R +S+A L + L F+ ++ +
Sbjct: 947 FIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLNG 1006
Query: 1061 KMWIIP---GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
K W+ P G S E ++ + + T+AD+ +A++GA + GG N
Sbjct: 1007 KRWVPPLVSGIEPASNEAR--------------QRSIGAATLADMTKAVVGAAFTDGGLN 1052
Query: 1118 VGLIFLDRIGIKVDFVNVP------YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEA 1171
+ K+ N Y + +A + +E LL Y+F D SL VE+
Sbjct: 1053 QAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVES 1112
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
+TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1113 MTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLT 1172
Query: 1232 LSSV---------------KHGLHKHILHASHELYKRINITVDSF------------EKL 1264
++ +H +HK++ S L+ + + D+ EK
Sbjct: 1173 FIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKA 1232
Query: 1265 SLGSTFGWESVTSFP----KALG------DIIESLAGAIFVDS-----GCNREVVFQSIR 1309
WE +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 1233 DAIKHELWEQ-RFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIV 1291
Query: 1310 PLLEPMITPETMRFHP 1325
PLLE I+ + HP
Sbjct: 1292 PLLEHFISHQITTDHP 1307
>gi|195391256|ref|XP_002054279.1| GJ24359 [Drosophila virilis]
gi|194152365|gb|EDW67799.1| GJ24359 [Drosophila virilis]
Length = 2250
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 178/376 (47%), Gaps = 70/376 (18%)
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV- 1130
S E ND S F + + + K++AD VEALIGA+L G L+F+ +G++V
Sbjct: 1879 SNETNDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVL 1936
Query: 1131 ---------------------DFVNV-------PYQRQFQVHAERLVN--VRHL------ 1154
D N+ P R +H N + HL
Sbjct: 1937 PYKLEPTAAAIEQRMPGSTKPDLNNMITVYGDWPTPRSPLLHFAPNANAELEHLLSGFEE 1996
Query: 1155 -ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
ES L Y+F D S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 1997 FESSLGYTFSDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHS 2056
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF--- 1270
PG LTD+RSA VNN +A +V+HG HK+ H S L N +D F ++ +
Sbjct: 2057 PGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL----NDVIDRFVRIQQENGHIIS 2112
Query: 1271 ------------GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT- 1317
E V PKALGD+ ES+AGAIF+DS + +VV+Q +++P I
Sbjct: 2113 EEYYLLSEEECDDAEDV-EVPKALGDVFESIAGAIFLDSNMSLDVVWQVYSNMMKPEIEQ 2171
Query: 1318 -PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADK 1374
++ P+REL E + KP + VTV+V G TF + +
Sbjct: 2172 FSNSVPKSPIRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNY 2225
Query: 1375 KTAKKVACKEVLKSLR 1390
+ AK A K L+ L+
Sbjct: 2226 RIAKCTAAKCALRQLK 2241
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIA--GNNSGIQCQSRKK 436
E + +I+ + TA VL LL+EL R C + T +A Q ++
Sbjct: 483 ETLCALIYCNQNHTARVLFELLAELSRRDPDLKFLRCQYTTDRVADPATEPKEAEQEHRR 542
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q ++++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR + +
Sbjct: 543 QEDVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYH 602
Query: 497 LLMV 500
+++V
Sbjct: 603 IMLV 606
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1717 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1775
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 1776 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 1806
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L +A ++NTI+ L S K IA+ LL+ + R+ V+V+L ++
Sbjct: 18 RDFQVELLASAFERNTIICLGHRSSKEFIALKLLQELSRPGRRNGK-VSVYLSSQI---- 72
Query: 83 QQAEAIKMH------TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
AEA M+ TDLKV + D V W + + V + P L L+
Sbjct: 73 -DAEATSMYTMLTHLTDLKVWQEQPDQHVP--SNHCW----TDYHVSIHKPSTFLSLLQS 125
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L+ I++++L++CH + Y I+ F +L S+ PRI G+ A P+ S
Sbjct: 126 GDLLLSSIQLIVLEDCHDSSV---YRSILPIFEDFILPAKPSDRPRILGL-AGPLHS 178
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM--GIC----TLYLPNNCPIQ 603
STG LS++++L+ YC+RLPSD + K T + + + G+ TL LP N P++
Sbjct: 811 STGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCARSVRQGVVLFQYTLRLPINSPLK 870
Query: 604 TVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A +AC +LH+IG L D L P
Sbjct: 871 HDIVGLPMPTQTLARRLAAFQACVELHKIGELDDQLQP 908
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
H L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y +
Sbjct: 1705 HQPDLVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENV 1761
Query: 1213 SPGYLTDMRSASVNN 1227
G L+ +RS V N
Sbjct: 1762 HEGKLSHLRSKQVAN 1776
>gi|89114026|gb|ABD61604.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 172/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDY+IT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYIITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
>gi|195037032|ref|XP_001989969.1| GH18503 [Drosophila grimshawi]
gi|193894165|gb|EDV93031.1| GH18503 [Drosophila grimshawi]
Length = 2254
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 179/384 (46%), Gaps = 69/384 (17%)
Query: 1064 IIPGDN-SGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 1122
+ P N S E ND S F + + + K++AD VEALIGA+L G L+F
Sbjct: 1874 MTPNANLDDSNETNDFSCFIPYNL--VSQHSIPDKSIADCVEALIGAYLIECGPRGALLF 1931
Query: 1123 LDRIGIKV-------------------------DFVNV----PYQRQFQVH--AERLVNV 1151
+ +G++V + V + P R +H V +
Sbjct: 1932 MAWLGVRVLPYKLVPTAADDERRAPGTSKPNAKNMVTIYGAWPTPRSPLLHFAPNATVEL 1991
Query: 1152 RHL-------ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
HL E+ L Y FRD S L++A+TH SY + CYQRLEFLGDAVLDYLIT +
Sbjct: 1992 EHLLSGFEEFEASLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRH 2051
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY SPG LTD+RSA VNN +A +V+HG HK+ H S L N +D F ++
Sbjct: 2052 LYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGL----NDVIDRFVRI 2107
Query: 1265 SLGSTFGWESV--------------TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
+ PKALGD+ ES+AGAIF+DS + +VV++
Sbjct: 2108 QQENGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSDLSLDVVWRVYSN 2167
Query: 1311 LLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHT 1368
+++P I ++ P+REL E + KP + VTV+V G T
Sbjct: 2168 MMKPEIEQFSNSVPKSPIRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----T 2221
Query: 1369 F--LDADKKTAKKVACKEVLKSLR 1390
F + + + AK A K L+ L+
Sbjct: 2222 FRGIGRNYRIAKCTAAKCALRQLK 2245
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQC-- 431
++ E + +I+ + TA VL LL+E+ R C + T IA + +
Sbjct: 486 QHDSSETLCALIYCNQNHTARVLFELLAEMSKRDPDLKFLRCQYTTDRIANPATEPKEAE 545
Query: 432 QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q ++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR
Sbjct: 546 QEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARA 605
Query: 492 QNSDYLLMV 500
+ ++++V
Sbjct: 606 APAYHIMLV 614
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1721 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYMTYENVHEGKLSHLRSKQVA 1779
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 1780 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 1810
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGI----CTLYLPNNCPIQ 603
ST LS++++L+ YC+RLPSD + K T + ++ GI TL LP N P++
Sbjct: 819 STAASVDLSTAIALVNKYCARLPSDTFTKLTALWRCASSERQGIKLYQYTLRLPINSPLK 878
Query: 604 TVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP 660
I + T ++ A +AC +LH+IG L D L P G E + A P
Sbjct: 879 YDIVGLPMPTQTLARRLAAFQACVELHKIGELDDQLQP-----------IGKEGFRALEP 927
Query: 661 IYFPPELVNQSPQDTKI 677
+ E + P+D +I
Sbjct: 928 DW---ECFDLEPEDEQI 941
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 22/177 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L +A ++NTI+ L S K IA+ LL+ ++ R+ + ++V+L ++
Sbjct: 18 RDFQVELLASAFERNTIICLGHKSSKEFIALKLLQEFSRRGRR-NGKMSVYLSSQI---- 72
Query: 83 QQAEAIKMH------TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
AEA M+ TDLKV + D V W + + V + P+ L L+
Sbjct: 73 -DAEATSMYTMLTHLTDLKVWQEQPDQQVPL--NHCWAD----YHVSIHKPESFLILLQN 125
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L+ +++++L++CH + I EF + PRI G+ A P+ S
Sbjct: 126 RDILLSSVQLIVLEDCHDSAVYRSVLPIFEEFVQ---PAKPCDRPRILGL-AGPLHS 178
Score = 41.2 bits (95), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
N + L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y
Sbjct: 1706 NFDYQPELVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYMTY 1762
Query: 1210 PGLSPGYLTDMRSASVNN 1227
+ G L+ +RS V N
Sbjct: 1763 ENVHEGKLSHLRSKQVAN 1780
>gi|6102924|emb|CAB59269.1| hypothetical protein [Homo sapiens]
Length = 525
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 271 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 330
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 331 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 386
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 387 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 446
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 447 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 500
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A K L+SL+A+ P
Sbjct: 501 RIAKSAAAKRALRSLKANQP 520
>gi|425626948|gb|AFX89032.1| dicer 1 [Mayetiola destructor]
Length = 2057
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 170/354 (48%), Gaps = 65/354 (18%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-----------DFVNVP------ 1136
+ K++AD VEALIGA L GG L+F+ +GI+V N+P
Sbjct: 1701 IPDKSIADCVEALIGANLIEGGPRGALLFMAWLGIRVLPSKEIPFNENSLENIPGSTKPF 1760
Query: 1137 ------YQRQFQVHA-----------------ERLVNVRHL-ESLLNYSFRDPSLLVEAL 1172
YQ + A ER +N + E + Y F D S L++A+
Sbjct: 1761 ERDGKKYQIVYGYWASPKSPLLHFSANPYETLERFLNGYSVFEEHIGYHFNDRSYLLQAM 1820
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1821 THASYSQNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFAS 1880
Query: 1233 SSVKHGLHKHILHASHELYKRINITVDSFEKL------SLGSTFGWESV--------TSF 1278
+V+HG HK+ H S L N +D F ++ S+ F S
Sbjct: 1881 LAVRHGFHKYFRHLSPSL----NDVIDRFVRIQVENNHSISEEFYLISEEECDEAEDVEV 1936
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKN 1336
PKALGDI ES+AGAIF+DS + ++V++ +++P I +++ P+REL E +
Sbjct: 1937 PKALGDIFESVAGAIFLDSNMSLDMVWKIFSNMMKPEIDQFSDSVPKSPIRELLEL-EPE 1995
Query: 1337 HFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
KP + VTV+V G + + + + AK A K L+ L+
Sbjct: 1996 TAKFGKPEKLADGRRVRVTVDVFGKGT---YRGIGRNYRIAKCTAAKCALRQLK 2046
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + R +S
Sbjct: 1514 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSRQVS 1572
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG + L + F+P W+ P
Sbjct: 1573 NLNLYRLGRRKMLGERMIATKFEPHDNWLPP 1603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 13/123 (10%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC-----------QSRKKQNE 439
+IF + + TA L S ++E+ +H + +Y++ +G + +KQ E
Sbjct: 421 LIFCDSIFTAKALFSFINEMT-KHDS-DLEYLSVQYTGDRIADPVMESKQFENEHRKQEE 478
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
+++ FR N+++ TS+LEEG+++ CNLV+ ++ T S++Q +GRAR Q + +++M
Sbjct: 479 VLKRFRMHSCNLLIGTSVLEEGIELPKCNLVVRWNLPTTYRSYVQCKGRARAQKAHHIIM 538
Query: 500 VKS 502
V +
Sbjct: 539 VST 541
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP----SPFVAVFLVPKV 78
R++Q+E L A++QN I+ L S K IA+ L+ ++ LR+ S + +FL
Sbjct: 18 RDFQVELLAAAIEQNIIICLGHNSSKEFIALKLILEKSHELRQNVNGCSKKITLFLANTT 77
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
+ TDLKV ++ A W E + + V++++ + L+ +
Sbjct: 78 TGSESMYNLLFHLTDLKVINIRNNVPT---KSAEWMEIICDYHVIILSASGCVYALQEKW 134
Query: 139 FKLNMIKVLILDECH 153
L + ++I+DECH
Sbjct: 135 LDLKHVNLIIIDECH 149
Score = 44.3 bits (103), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L +YS PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1506 LNDYSGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGK 1562
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1563 LSHLRSRQVSN 1573
Score = 44.3 bits (103), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 556 TLSSSVSLIYFYCSRLPSDGYFKPTPKFH-INKEMGICTLY-----LPNNCPIQTVIAQG 609
+L++++ L+ YC++LPSD + K TP + I + G T Y LP N P++ I
Sbjct: 664 SLTNAILLVNKYCAKLPSDTFTKLTPIWRCIKTKRGDRTYYQYTVRLPINSPVKQDIYGI 723
Query: 610 NIKT---LKQAACLEACKKLHQIGALTDNLLP 638
+ + ++ A L CK LH G L DNL P
Sbjct: 724 PMPSRVLARRFAGLICCKVLHLSGELDDNLQP 755
>gi|195331135|ref|XP_002032258.1| GM23619 [Drosophila sechellia]
gi|194121201|gb|EDW43244.1| GM23619 [Drosophila sechellia]
Length = 2249
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 167/367 (45%), Gaps = 82/367 (22%)
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQV---- 1143
+ + + K++AD VEALIGA+L G L+F+ +G++V +P RQ
Sbjct: 1892 LVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDAGNQE 1947
Query: 1144 ---------HAERLVNV-----------------------------RHLESLLNYSFRDP 1165
+AE +V V E L Y FRD
Sbjct: 1948 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 2007
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV---------- 1275
NN +A +V+HG HK H S L N +D F ++ +
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECD 2123
Query: 1276 ----TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HP 1325
PKALGD+ ES+AGAIF+DS + +VV+ + M++PE +F P
Sbjct: 2124 DAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSNSVPKSP 2179
Query: 1326 VRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACK 1383
+REL E + KP + VTV+V G TF + + + AK A K
Sbjct: 2180 IRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAK 2233
Query: 1384 EVLKSLR 1390
L+ L+
Sbjct: 2234 CALRQLK 2240
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQC--QSR 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 489 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAEMEH 548
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 549 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 608
Query: 495 DYLLMV 500
++++V
Sbjct: 609 YHVILV 614
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1723 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 1812
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 816 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 875
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 876 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 912
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 61/316 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L +A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V
Sbjct: 18 RDFQVELLASAYERNTIICLGHRSSKEFIALKLLQELSRRARRHG-RVSVYLSCEVGTST 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ M H TDL+V + DM + F W + + V ++ P+ L
Sbjct: 77 EPCSIYTMLTHLTDLRVWQEQPDMQIPF--DHCW----TDYHVSILRPEGFFYLLETRDL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK----- 194
L+ I++++L++CH + Y I F + ++ ++ PRI G+ A P+ S
Sbjct: 131 LLSSIELIVLEDCHDSA---VYQRIRPLFENHIMTAPPADRPRILGL-AGPLHSAGCELQ 186
Query: 195 -----VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF---------- 239
+++ EQ +I ++ Y + PF +
Sbjct: 187 QLSAMLATLEQSVLCRIETASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHK 246
Query: 240 -----YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN--STL 292
++YD P+ +Y + M ELK ++ KV +N ++L
Sbjct: 247 SFLLDHRYD--PYEIY---GTDQFMDELK---------------DIPDPKVDPLNVINSL 286
Query: 293 LYCLSELGVWLALKAA 308
L L E+G W +AA
Sbjct: 287 LVVLHEMGPWCTQRAA 302
Score = 40.4 bits (93), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1715 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1771
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1772 LSHLRSKQVAN 1782
>gi|89114032|gb|ABD61607.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 171/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P RQ +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+ E +V V E L Y FRD S L++A+TH
Sbjct: 1900 NPENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 40.0 bits (92), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|340516882|gb|EGR47129.1| predicted protein [Trichoderma reesei QM6a]
Length = 1376
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 170/667 (25%), Positives = 299/667 (44%), Gaps = 83/667 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+E L+ +LKQN IV ++TGSGKT +A++ ++ + + F+ P V L
Sbjct: 2 RAYQIEMLDKSLKQNVIVAMDTGSGKTQVAVLRIKKELEICDASK--IIWFIAPTVSLCH 59
Query: 83 QQAEAIKMHTD-LKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ + +K+ + + G+ +D W W + +++ TPQ+LLD L +Y L
Sbjct: 60 QQHDVLKLQIPAVPMMTLAGNSNIDAWGPDIWAILLDTVRIVISTPQVLLDALDHAYLNL 119
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP-IKSKVSSSEQ 200
++ +L+ DE H+ G+ IM YH G+S +P + G+TA+P I+S+++
Sbjct: 120 GLLALLVFDEVHNCIGRSPGGKIMLHHYHPRKLAGES-VPAVLGLTATPSIQSELAD--- 175
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI 260
I LE LM+++ C S ++ + + K K I H +Y +++
Sbjct: 176 -----IDALEWLMDAR---CVSPTLHRDEL------LKCVKRPNIKHIIYKAGKEDITTP 221
Query: 261 ELKH-TRSLENLD-LNEAQAELIRKKVSKINSTLL---------YCLSELGVWLAL--KA 307
++ R LD L + ++R + N+ LL Y +++ + A +
Sbjct: 222 TMRDLDRVYRALDILEDPYILMLRNNPTDRNNRLLLTAIEKYDTYTQNQMKSFCARSREI 281
Query: 308 AETISCYESDFFAWEQLDGFGETI------IKKFGSDASQALVTYVPSGAEWSIGDDSKF 361
+ + + +D F W+ + + + + ++G+ S +++ I K
Sbjct: 282 CKQLGPWAADLFIWKAISAHLDKVDRQTDGVDEYGNKWSSGSTSFLEKKHLADIYRRVKV 341
Query: 362 NLDSGL------LTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRH 414
S + +++K+ LI LL E IIFVE RV+ A +L+E+L +
Sbjct: 342 QRPSDVPQVFEDISDKVGKLIFELLSVE--EPTVGIIFVEERVMVA-----MLAEVLSVN 394
Query: 415 CTWKTKY----------IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
T ++Y AG + +K + ++ FR G +N+++ATS+LEEG+DV
Sbjct: 395 HTITSRYRIGTMVGTSNYAGRRKAVYDFDQKTDYKDLQSFRSGKINLLIATSVLEEGIDV 454
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---QSRLENYLASGNKM 521
+CNLVI FD T SFIQ RGRAR ++S+ LL + Q++ E
Sbjct: 455 PACNLVICFDTPTTPKSFIQRRGRARSKDSNLLLFFDDANPAILKWQAKEEEMNRIFEDE 514
Query: 522 RKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRL-PSDGYFKPT 580
+ + L S + + + V STG ++ + +C L PSD +
Sbjct: 515 ERAIRELGKLEDSESPSTIS----FTVPSTGARLDFDNAKQHLEHFCRVLCPSD-FVDSR 569
Query: 581 PKFHINKEMGICTL--------YLPNNCPIQTVIAQG-NIKTLKQAACLEACKKLHQIGA 631
P + I +E L +LP N T + + K + A +A L+
Sbjct: 570 PDYIIRREQDSPLLTAIVLLPPFLPVNLRQHTSASPWRSEKNATKDAAYQAYIALYDAKL 629
Query: 632 LTDNLLP 638
+ +NLLP
Sbjct: 630 VNENLLP 636
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 193/432 (44%), Gaps = 56/432 (12%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL-EAITTKKCQEDFHLESLETLG 1003
+P+++H L +L+A L +LD V I ++++ EAI+ + E + E LE LG
Sbjct: 885 LIPTMIHELGVMLMAKELAYSVLDE----VGISDLQLVKEAISARSASEPVNYERLEFLG 940
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DS LK+ A + + EG LS ++R++SN+ L K E LP FI T+ F + W
Sbjct: 941 DSILKFCACMRAAAEKPDYPEGYLSYWRDRLVSNSRLYKAALEFGLPRFILTKPFTGQKW 1000
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 1123
L D + + ++K+ +KT+ADVVEALIGA GG + + +
Sbjct: 1001 ---------RPLYLDEVLQQGDVATPEKRKLSTKTLADVVEALIGASYVDGGLSKAVTCI 1051
Query: 1124 DRIGIKVDFVNVPYQRQ-----FQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM 1178
+ + + +V R+ + LE L+ Y+F+ +LL+EALTH SY
Sbjct: 1052 SKFVPEGSWTSVDADRESLFARVPDGEPLPPPLEPLEKLIGYTFQKKALLMEALTHASYA 1111
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHG 1238
R +RLEF+GDAVLD +I L+ P L + +++ VN D A +++HG
Sbjct: 1112 ADFGTRSLERLEFIGDAVLDNIIVTKLFRLKPALPHFRMHTLKTGLVNGDFLAFMTMEHG 1171
Query: 1239 -----------------------LHKHILHAS-------HELYKRINITVDSF-EKLSLG 1267
L + AS E KR + E +
Sbjct: 1172 VQLAADPVVTEEATVEVPETISYLWSFLRQASFPIAIELKETNKRHAALREQIHEAMDND 1231
Query: 1268 STFGWESVTSF-PKAL-GDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITPETM 1321
+ W + + PK D+ E++ GA+++DSG C V I ++ ++ E
Sbjct: 1232 DHYPWALLAALSPKKFYSDLFEAVLGAVWIDSGSLAACEGMVAQFGILKYMDRLLRDEVH 1291
Query: 1322 RFHPVRELTEYC 1333
HP EL +
Sbjct: 1292 VQHPKEELGMWA 1303
>gi|89114048|gb|ABD61615.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 171/387 (44%), Gaps = 112/387 (28%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1666 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1037 NAALCKLGCEQKLPGFIRTESFD------PKMWIIP------------------------ 1066
N L +LG ++L ++ F+ P + +P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1067 --------------------------GDNSGSYELNDDSLFNGRKIYV----TGRKKVKS 1096
G +G + ++DS N ++ + +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSC-NDFSCFIPYNLVSQHSIPD 1843
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-------------QV 1143
K++AD VEALIGA+L G L+F+ +G++V +P R +
Sbjct: 1844 KSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRHLDGGNQEQRIPGSTKP 1899
Query: 1144 HAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEALTH 1174
+AE +V V E L Y FRD S L++A+TH
Sbjct: 1900 NAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF 1261
V+HG HK H S L N +D F
Sbjct: 2020 VRHGFHKFFRHLSPGL----NDVIDRF 2042
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 432 GSDTLCALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 491
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 492 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 551
Query: 495 DYLLMV 500
++++V
Sbjct: 552 YHVILV 557
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGIC----TLYLPNNCPIQT 604
TG L S+++L+ YC+RLPSD + K T + K G+ TL LP N P++
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 855
Score = 41.6 bits (96), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 785 PSTGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNA-RIVHTKSGPLCTCKIHNSLVCTPH 843
P+ G+ IDW+ + + N +TM A K+ P + +++V +
Sbjct: 1034 PAGGKHIDWQFLELI----------QANGNTMPRAVPDKERKAQPFDAQRFQDAVVMPWY 1083
Query: 844 NGQ----IYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN----- 894
Q + + + HL+ S F +N T+K +Y +YG+++ +PLL+
Sbjct: 1084 RNQDQPQYFYVAEICPHLSPLSCFPGDN--YRTFKHYYLVKYGLKIQNASQPLLDVDHTS 1141
Query: 895 GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFT 944
R F Y+++ ++ K + + E L PELC + P SL + +
Sbjct: 1142 ARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRTAV 1199
Query: 945 FVPSIMHRLQSLLLAVNLKNML 966
+P I++R+ LLLA +++ +
Sbjct: 1200 CLPCILYRINGLLLADDIRKQV 1221
Score = 40.0 bits (92), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1658 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1714
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1715 LSHLRSKQVAN 1725
>gi|193786026|dbj|BAG51002.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 300 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 359
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 360 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 415
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 416 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 475
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 476 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 529
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 530 RIAKSAAARRALRSLKANQP 549
>gi|168177333|pdb|3C4T|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 136/257 (52%), Gaps = 28/257 (10%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
E +NY F++ + L++A TH SY I YQRLEFLGDA+LDYLIT +LY S
Sbjct: 18 FEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHS 77
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFG 1271
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F K L G
Sbjct: 78 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEMQG 133
Query: 1272 WES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+S PKA+GDI ESLAGAI++DSG + EVV+Q P+++P+I
Sbjct: 134 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEK 193
Query: 1319 ETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKK 1375
+ PVREL E + FS P GK VTVEV G+ + +
Sbjct: 194 FSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYR 247
Query: 1376 TAKKVACKEVLKSLRAS 1392
AK A + L+SL+A+
Sbjct: 248 IAKSAAARRALRSLKAN 264
>gi|353227266|emb|CCA77779.1| hypothetical protein PIIN_03414 [Piriformospora indica DSM 11827]
Length = 1418
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 215/459 (46%), Gaps = 42/459 (9%)
Query: 892 LLNGRRIFHVQNYLSKCRQQKQKEPSKIS---FELPPELCRIIMAPISLSTFYSFTFVPS 948
+L R IF + + ++ R +++P +S +P +C+ + + F+ +P
Sbjct: 848 VLQCRPIFSITS--TEFRDPARQKPGILSDTDVFIPQSVCQWLN--LDEDRLRWFSSLPP 903
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI---KVLEAITTKKCQEDFHLESLETLGDS 1005
+ H L S+ A L + L +P + + +EA+T + F+ + LETLGDS
Sbjct: 904 LFHLLSSVYRARLLHSRL--------GVPELDLDRTIEALTIPQACASFNNQRLETLGDS 955
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII 1065
FLK A + + + + HEG L+ ++ + N L G Q L F+ E W I
Sbjct: 956 FLKVATTIHVLNKFPHKHEGQLTSLRQNSVCNRYLLGRGHAQNLVSFMNIEPNSQSRWRI 1015
Query: 1066 PGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDR 1125
++ N R + + ++V D +EAL+G +GG+ GL R
Sbjct: 1016 TPVST--------KYINSRSFV---ERVIPRRSVQDCMEALLGVAWLSGGDKAGLRVGTR 1064
Query: 1126 IGIKVDFVNVPYQRQF---QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI 1182
+G+ VP+ ++ ++ LE L Y+F+D SLLVEALTH S++
Sbjct: 1065 LGLCFGG-TVPWAERYPKVELAFSSSSPFPPLEENLGYTFKDKSLLVEALTHPSFVSGSA 1123
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV-NNDCYALSSVKHGLHK 1241
YQRLEFLGDAVLD + + ++ YP + G LT R+ V N+ AL + K +HK
Sbjct: 1124 --SYQRLEFLGDAVLDLVTVEHFFHLYPNATSGKLTRARARCVCNSTLSALGTKKLEIHK 1181
Query: 1242 HILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN- 1300
+ + L N T F + PKALGD++E+L GA+FVDSG N
Sbjct: 1182 AMFCDAISLVAAANKTARMFNSMDFTQVIDNIWRLDAPKALGDMVEALIGAVFVDSGWNY 1241
Query: 1301 ---REVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
++VV + + +L+ I P+ M P E + K+
Sbjct: 1242 NIVKDVVIRLFKEVLD-YIHPD-MPLDPTSEFMIWVAKH 1278
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 116/208 (55%), Gaps = 32/208 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ E +A QN I+ +TG+GKTLI+ M VA+FLVPKV LV
Sbjct: 12 ARLYQEELARHARDQNAIIAADTGTGKTLISAM---------------VALFLVPKVPLV 56
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ ++ +T KV Y G MGVD+WD W +E ++LVMTPQI L+ LR +++ +
Sbjct: 57 DQQRAFLEENTPFKVRGYSGAMGVDYWDKTAWTKEFMGVDILVMTPQIFLNILRHAHWSI 116
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR--IFGMTASPI---KSKVS 196
+ + +++ DE H+ +GK A IM E YH T + LPR I G+TASPI K V+
Sbjct: 117 DRVSIIVFDEIHNCKGKSPEALIMMEHYH----TIPNGLPRPKILGLTASPIFNPKKPVA 172
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASES 224
+ + ++E L + KVY + +
Sbjct: 173 A--------LAEIEKLTDCKVYVVKAHT 192
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 19/235 (8%)
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
G++ K Q+++V +FR G +N+I+ATS+ EEGLD C+ V FDP RT+ +IQSRG
Sbjct: 405 GMKGMPFKTQDKVVADFRMGGLNLIIATSVAEEGLDFPLCSFVCRFDPPRTLPQYIQSRG 464
Query: 488 RARMQNSDYLLMVKSGDSTTQSRLENYLAS--------GNKMRKEVLSHASLPCSPLNNH 539
RARM S +++M++ G S + +E G+ M +E +P ++
Sbjct: 465 RARMAGSTFVIMLEEGPSKERETVEALQVGEIRAKTMYGSNMDREDDEVELDENTPKDDG 524
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP-TPKFHINKEMGICTLYLPN 598
+ G + VE TG T + S+SL+ CS +P D + + P + + T LP
Sbjct: 525 LEGR--FIVEKTGASLTPAGSISLLNNLCSLIPRDDHTRSLQPVYETDPVTFRTTNRLPP 582
Query: 599 NCPIQT----VIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLPDIVVEKHD 646
PI ++ +T K A A +A +L+++G D LLP I EK D
Sbjct: 583 ALPIPREDLLFVSDPFCRTKKAAKRNAAFKAVLRLYELGVFDDFLLP-IRREKGD 636
>gi|414453403|gb|AFX00003.1| Dicer [Mnemiopsis leidyi]
Length = 2002
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 193/800 (24%), Positives = 336/800 (42%), Gaps = 152/800 (19%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSEL---LPRHCTWKTKYIAGNNSGIQCQS------- 433
G + R I+F++R I + L +L + K Y+ G +G
Sbjct: 787 GTDAPRIIVFIQRRRVVIAMHKYLCKLRKEVEGCANIKACYVLGGTTGSSKDDDESKLSD 846
Query: 434 ---------RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
+K+Q + + +FR G N+++ATS++EEGLD+ +CN+VI +D +T +++Q
Sbjct: 847 FEVDYLETIKKQQEQALIDFREGKHNILLATSVVEEGLDIPACNIVIRYDFPQTYRAYVQ 906
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED 544
SRGRAR + + ++ +K + + RL L S + + + +AS SP +H +D
Sbjct: 907 SRGRARKKPAKFVFFMKETEKNEKMRL---LGSFHDIEILLREYAS-DMSPRADHQEDDD 962
Query: 545 FY-----------HVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK-FHINKEMGI- 591
VE TG T + ++ + FYCS+LP D Y P + I G
Sbjct: 963 DDEFNYNKLIPPLEVEGTGAKVTANLAIQRLNFYCSQLPKDDYTDVMPSDYTIEDARGFK 1022
Query: 592 CTLYLPNNCPIQTVIA---QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDA- 647
T+ LP CP++ I N K K +A ++ + L+ LTD LLP ++ +
Sbjct: 1023 TTITLPKLCPVKIPIEGQYMSNKKLAKMSAAMKTLEFLYSANELTDTLLPKFRQKEVNPL 1082
Query: 648 --QKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELK---QHFNYD---ISARNI 699
Q + + P + ++ ++ Y I L N+D + ++
Sbjct: 1083 LIQSESGRSLTVDQKLKIPSAFWRRDLKEASGKFYLYSIRLHLIPNDPNFDEYFVDGKDH 1142
Query: 700 VLAMRTEL--ESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRR-FQITLFRVI 756
+A L E + F + G +TVN++ R +P VL FQ LF +
Sbjct: 1143 KVACFGILCKERLPQFPLFTVYPRFGSVTVNIQ-FERAVTVPIHVLQSYYWFQEALFTHL 1201
Query: 757 MDHN-LDKLNEIL-------------DGFELRDN------LEIDYLLLPSTGQLIDWKT- 795
+D N + K ++ + G + R + L+ID + + D++T
Sbjct: 1202 LDLNHVTKSSDAIFKSYFILPLCWKSKGLQFRSSDKKSCFLDIDSRFIAQLHKQWDYETN 1261
Query: 796 --------------VATVLFP---RDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSL 838
+ +V+FP +D ++ N N S F A I ++ P
Sbjct: 1262 RWIFGNMPDDLDKCLDSVIFPAYNKDLRNQCNKNLSGYFYAVIRKSELTP---------- 1311
Query: 839 VCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRI 898
+ S+ ++ TY++++ ++ I+L + LL R +
Sbjct: 1312 ---------------KDKMRGRSVKNPDDLETQTYEEYHYAKHDIKLVHPTKNLLECRNV 1356
Query: 899 FHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
+L++ +K P L E+ ++ P SL + T +PSI+ R+++ L
Sbjct: 1357 TRHYAFLTEHASKKLNRPPMF---LIGEIHQVHPMPSSL--WSQATCLPSILWRIETFCL 1411
Query: 959 A----------VNLKNMLL------------DHCMQNV--------TIPTIKVLEAITTK 988
+ NLK LL D+ M + I + L +IT K
Sbjct: 1412 SNELTDNVYKGCNLKIDLLASHESNYFNERTDNLMARLRRDLEYKGDIDWFETLHSITHK 1471
Query: 989 KCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ- 1047
C E+++LE LE LGD FLK+ ++ ++T + HEG LS + +ISN L C++
Sbjct: 1472 SCGEEYNLERLEFLGDRFLKFVSTLYYYRTMPDKHEGWLSRYRSEMISNQNLAVRSCKEI 1531
Query: 1048 KLPGFIRTESFDPKM-WIIP 1066
+LP +I + DPK WI P
Sbjct: 1532 ELPRYILNKKVDPKSNWIPP 1551
Score = 120 bits (301), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 133/275 (48%), Gaps = 53/275 (19%)
Query: 1092 KKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------DFVNVPYQR-- 1139
+++ +K VAD +EAL+G ++ G G+ LDRI + D N Y++
Sbjct: 1642 QEMGTKDVADSMEALLGLCVARYGYRKGVDLLDRIKVTTFQAQSEAEPDDLNNHLYKQTP 1701
Query: 1140 ----------QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRL 1189
++ R N+R +E + Y F++P L+EALTH S+ EI CYQRL
Sbjct: 1702 PSQISNLNPVAIRLARSRCDNLRTVEKAIGYEFKEPLYLLEALTHASFT--EIDACYQRL 1759
Query: 1190 EFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHE 1249
EFLGDAVLD L+ +Y +P G +TD+ S+ V N + K LHK +L+ S E
Sbjct: 1760 EFLGDAVLDVLMVFRIYEDHPEYDQGQMTDLLSSLVCNTTLSKVCTKLQLHKSLLYDSAE 1819
Query: 1250 LYKRINITVDSFEK---------LSLGSTFGW----------------ESVTSFPKALGD 1284
L+ + +FEK LSL F V PK LGD
Sbjct: 1820 LFNVLAGFFMNFEKDQLEQWCKDLSLERVFVDTVDCDTPDKIPILNLDNKVVQAPKLLGD 1879
Query: 1285 IIESLAGAIFVDSGCNREV--VFQSIRPLLEPMIT 1317
++ES+ GAI++D C+ ++ V++ I P EP T
Sbjct: 1880 LVESVIGAIYLD--CDEDILRVYEVIWPWFEPFYT 1912
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 27/124 (21%)
Query: 3 PVSMESDTTE---EVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY 59
P + + D E +V D +P R+YQ+E L A K+NTIV + TG+GKT +A++L++ +
Sbjct: 529 PWTFKKDANEKLNDVQTDFVP--RDYQIEMLNRAKKENTIVMMPTGTGKTFVAVLLIKHF 586
Query: 60 AYLL-----RKP-----------------SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVG 97
+ + R P S FLV +V LV QQ ++ HT + VG
Sbjct: 587 IHQVMTDPWRGPCAENSSCGNGKCSCGNKSWRRTFFLVNQVTLVSQQKRVLERHTGVAVG 646
Query: 98 KYWG 101
+Y G
Sbjct: 647 EYSG 650
Score = 41.6 bits (96), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILH 1245
+RLEFLGD L ++ T+Y Y P G+L+ RS ++N A+ S K L ++IL+
Sbjct: 1480 ERLEFLGDRFLKFVSTLYYYRTMPDKHEGWLSRYRSEMISNQNLAVRSCKEIELPRYILN 1539
>gi|193787170|dbj|BAG52376.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 566 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 625
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 626 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 681
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 682 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIE 741
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 742 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 795
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 796 RIAKSAAARRALRSLKANQP 815
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 195 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 254
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPG 1067
+LG ++ LP + FDP + W+ PG
Sbjct: 255 YRLGKKKGLPSRMVVSIFDPPVNWLPPG 282
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 1158 LNYSFR----DPSLLVEALTHGSYMLPEIPRCY--QRLEFLGDAVLDYLITVYLYNKYPG 1211
+ YS R +P L+++ALT L + +RLE LGD+ L + IT YL+ YP
Sbjct: 181 IGYSSRTLGPNPGLILQALT-----LSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPD 235
Query: 1212 LSPGYLTDMRSASVNN 1227
G L+ MRS V+N
Sbjct: 236 AHEGRLSYMRSKKVSN 251
>gi|355683929|gb|AER97238.1| dicer 1, ribonuclease type III [Mustela putorius furo]
Length = 560
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 307 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 366
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 367 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 422
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 423 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 482
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 483 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 536
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 537 RIAKSAAARRALRSLKANQP 556
>gi|302502160|ref|XP_003013071.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
gi|291176633|gb|EFE32431.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
Length = 1490
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 216/466 (46%), Gaps = 74/466 (15%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKV 981
+P I M P+ + F F+PS++H + LLA L +L QN+ + V
Sbjct: 986 IPARQSCISMLPVGFAKFA--LFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQL----V 1039
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AIT +ED + + LE LGDS LK AS QL + HEG+LS KK+ I+SN+ L
Sbjct: 1040 LTAITATSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLW 1099
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVAD 1101
K + L FI T F W P NS + N KI +K+ +KT+AD
Sbjct: 1100 KAAVDTGLDQFILTTCFTGAKW-RPLYNSTYTD-------NAGKIGEKSTRKLSTKTLAD 1151
Query: 1102 VVEALIGAFLSTGGENVGL----IFLDRIG-------IKVDFVNVPYQRQFQVHAERLVN 1150
VVE+LIG + GGEN L +FL I I++ + + P F R +
Sbjct: 1152 VVESLIGVAIIDGGENKVLRCLELFLPEINWLPSGERIEILYDSAP---DFNDDCPRDI- 1207
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L++YSF +LL +L+H S P YQRLEFLGD++LD ++T L+
Sbjct: 1208 LSKIEPLIDYSFTKKALLAASLSHPSN--PISGMTYQRLEFLGDSILDNIVTRALFRCKK 1265
Query: 1211 GLSPGYLTDMRSASVNNDCYAL--------------------------SSVKHGLHKHIL 1244
+ + +R+A VN D A S+ + L +++
Sbjct: 1266 EIPHQDMHLIRTALVNADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMS 1325
Query: 1245 HASHELYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALGDIIESLAGAIF 1294
H+S ++ + +FE+ L G+ + W +++ PK DIIES+ GAIF
Sbjct: 1326 HSSTDIVETQQAMARTFEELRDQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIF 1385
Query: 1295 VDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTEYCQ 1334
+DS C + + + L+ ++ + + F HP + L Q
Sbjct: 1386 IDSRGSILACQKFLTRIGLMDYLQRVLEDDGIDFMHPKQRLGVVAQ 1431
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 159/643 (24%), Positives = 261/643 (40%), Gaps = 130/643 (20%)
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYW-GDMGVDFWDGAT-WKEEMSKHEVLVMTPQIL 130
FL P+V L QQ AI K G ++ W W + ++V TPQIL
Sbjct: 156 FLAPRVPLAEQQYRAISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQIL 215
Query: 131 LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP 190
LD L + L I +L+ DE +L ET D LP I G+TASP
Sbjct: 216 LDVLSNGFITLRRIALLVFDE------------------DQLSETND--LPSILGLTASP 255
Query: 191 IKSKVSSSEQDYWQKIHDLETLMNSKVYTCA---SESVLSNFIPFSTAKFKFYKYDEIPH 247
SK+ + LE +++ T A E + IP + + K IPH
Sbjct: 256 T-SKLIEDSLSLLMESRQLEQNLDAFCKTPAIHREEMMQYVHIP-ELRRISYQKDSIIPH 313
Query: 248 ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
+ E+K L+++D+ E+ R K + + CL L
Sbjct: 314 NM-----------EMKFLHMLDDIDI-ESDPFFQRHKGKTDSKSTEKCLRAL-------- 353
Query: 308 AETISCYESDFFAWEQLDG-FGETIIKKFGSDASQALVTYV-------------PSGAEW 353
A C + + ++ +GE G AS A ++ + S +EW
Sbjct: 354 ARKTPCLDQLKRCFTKISHMYGE-----LGHWASSAFISEIYRRTREKRAKLVDHSWSEW 408
Query: 354 SIGDDSKF-----------------NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVER 396
DDS F N +++K+ LI+ LL R IIFVE+
Sbjct: 409 D-RDDSSFMCNALEPVVAIMGERCWNSTPDAVSQKVEHLID-LLSSELTGSSRGIIFVEQ 466
Query: 397 VITAIVLQSLLSELLPRHCTWKTKYIAGNNSG-------IQCQSRKKQNEIVEEFRRGLV 449
TA++L L+S P K+ Y GN++ + + + + G
Sbjct: 467 RATAVMLSHLISHY-PELTHIKSDYFLGNSAFSDRKADLTELSKPGDMKNSIADLKSGKK 525
Query: 450 NVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS 509
N++VATS+LEEG+DV +C+LV+ FDP + + SF+Q RGRAR ++S +++ D+ T
Sbjct: 526 NLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAEDDTAT-- 583
Query: 510 RLENYLASGNKMRKEVLSHASL---PCSPLNNHMYGEDFYHVESTG-------------- 552
+++ A + M++ LS+ + + +ESTG
Sbjct: 584 -YKDWEAMEDIMKERYLSNKEFIERLREEDDEEEVEYESLRIESTGYGVTPGLVLWDCLL 642
Query: 553 -------TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN----KEMGICTLYLPNNCP 601
+ TL ++ + + +CS +P + + P F I+ K+M + LP
Sbjct: 643 TIYYSVRALLTLENARAHLSHFCSTIPCE-FTDTQPDFIISKTGIKDMLTAKVLLPTVLD 701
Query: 602 IQ-----TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLPD 639
+Q + A K K+ A +A +L++ G + D+L+P+
Sbjct: 702 LQFREFEGIQAWKREKMAKRDAAFQAYLQLYKAGLVNDHLMPE 744
>gi|390332898|ref|XP_790894.2| PREDICTED: endoribonuclease Dicer-like [Strongylocentrotus
purpuratus]
Length = 1815
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 169/349 (48%), Gaps = 56/349 (16%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVNV 1135
+ K++AD VEALIG +L + G L+ + +G+ V ++
Sbjct: 1468 MSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGLDVLPTIDGQSNKRNDQSSDLPAADL 1527
Query: 1136 P------YQRQFQ------------VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
P Y +Q + V +LV E +NY FRD + L++A TH SY
Sbjct: 1528 PVSCLYGYLKQPESPLLRSVPNAEDVLQHQLVGYDGFEKTINYRFRDRAYLLQAFTHSSY 1587
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
I CYQRLEFLGDA+LDYLIT +LY+ + LSPG LTD+RSA VNN +A +VK
Sbjct: 1588 HRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKF 1647
Query: 1238 GLHKHILHASHELYKRIN---ITVDS-FEKLSLGSTFGWESVTS---------FPKALGD 1284
HK+ + +++ I+ VD+ E L + S + + PKALGD
Sbjct: 1648 NFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEVPKALGD 1707
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKK 1342
I ES+AGAI++DSG + V++ P+++ I + PVREL E + +
Sbjct: 1708 IFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPISPVRELLE--MEPETARFG 1765
Query: 1343 PVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
P I GK VTV V G+ + + AK A + L+ L++
Sbjct: 1766 PPEKTIDGKTRVTVNVVGKGQF---KGIGRNYHIAKATAARFALRHLKS 1811
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 172/674 (25%), Positives = 278/674 (41%), Gaps = 125/674 (18%)
Query: 383 RGVEDIRCIIFVERVITAIVLQSLLSELLPRH-------CT----WKTKYIAGNNSGIQC 431
R ++ IIFVE+ TA+V+ L +L R C+ + S IQ
Sbjct: 470 RSTTNLCGIIFVEQRYTAVVMSRLFKKLSKRDPNLHFLLCSCIAMGSGRLGTTKKSAIQV 529
Query: 432 QS-RKKQNEIVEEFRRGLVNVIVATSILEEGLDV---QSCNLVIMFDPSRTVCSFIQSRG 487
Q+ R+K E++ +FRR VNV+VATS +E+G+++ CNLV+ FD + S++QS+
Sbjct: 530 QNQRRKHEEVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPTSYQSYMQSKA 589
Query: 488 RARMQNSDYLLMVKS-------GDSTTQSRLENYLASGNKMR----KEVL----SHASLP 532
+AR S YL+++ GD E L +K + +EVL + +P
Sbjct: 590 KARAPTSHYLMLIYEPDVQLFLGDVQCYQEFERVLNRKSKGKTQPQEEVLDLLVADKQMP 649
Query: 533 CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-- 590
N E A++++++ +I YC++LPSD + T + + G
Sbjct: 650 AYIPKN----------EEGSPRASMTTAIQIINRYCAKLPSDVFTHLTASCKMKERKGDV 699
Query: 591 ----ICTLYLPNNCPIQTVIAQGNIKTLK---QAACLEACKKLHQIGALTDNLLP---DI 640
TL LP N PI+ I +K K A ++A LH+ G L D L P +
Sbjct: 700 SPEFQATLQLPINSPIRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQPMGKES 759
Query: 641 VVEK---------HDAQKRGNEPYNAEHPIYFPPELVNQSPQD--TKITYHCYLIELKQH 689
+++ D Q R P + Y+ E V + Q+ + CYL +
Sbjct: 760 ILKATDNAFNHLFADGQTR---PGTTKKRQYYDKE-VAKCLQECLPQADQPCYLYSVDMS 815
Query: 690 FN------YDISARNIVLAMRTE------LESEIKKV-NFDLEVERGRLTVNLK-HLGRI 735
+I R + T+ +I KV F + G L V++ I
Sbjct: 816 LASPLPDILNIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSIMLESDEI 875
Query: 736 QLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLL--------PST 787
+L +Q+ + F +F ++ LDK N L+ + + +YL++ PS
Sbjct: 876 RLSSSQIRRAQSFHGCMFSEVL--RLDKPNLELNP----EKSQANYLIVPLKEGPAGPSG 929
Query: 788 G-QLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP---- 842
G +IDW + V S +++ T +++S + I V TP
Sbjct: 930 GPSVIDWSFLEKVSL-----SSGHLDQPTQLPD---YSQSQFEFSTDILADAVVTPIYRN 981
Query: 843 -HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREP---------- 891
Q Y + +L L S F T+ +Y ERY IQ+ ++P
Sbjct: 982 IDQPQRYFMADILYDLPVTSPFPSEK--YETFVDYYFERYDIQISNFQQPLVDVDCMSSR 1039
Query: 892 --LLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
LL R + H L Q +K + L PELC I PI S + +PSI
Sbjct: 1040 LNLLTPRYLNHKGKALPISTGQNKKGNLQKKQYLVPELCYIY--PIPASLWRKAVCLPSI 1097
Query: 950 MHRLQSLLLAVNLK 963
++RL +LL+A L+
Sbjct: 1098 LYRLNALLIAEELR 1111
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 14/213 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSPFVAVFLVPKVV 79
R+YQLE LE AL+QNT V L++G+ KT +A+ML++ + +R + +FLV
Sbjct: 39 RHYQLELLETALEQNTTVCLQSGTEKTFLAVMLIKELSGSVRLRLEDGGKRTIFLVNSES 98
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ + I HTDL V +Y + WD W++E+ V VM +I L L++SY
Sbjct: 99 YLSEYGNVIHTHTDLNVKEYRNSDKMISWDRTRWQDEIEHCHVAVMDSEIFLKLLQMSYV 158
Query: 140 KLNMIKVLILDECHHA-RGKHQYACIMTEF--YHRLLETGDSNLPRIFGMTASPIKSKVS 196
L+M+ +LILDECHH + H Y IM F Y R + PRI G+T S +K
Sbjct: 159 GLSMLNLLILDECHHTLQHLHPYHQIMLAFKQYPR------DDRPRILGLTESILKGDFK 212
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
+ + I LET + SK + + +S +
Sbjct: 213 PCALE--EHIDMLETSLQSKAKIATNLTSISKY 243
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
PTI +L+++T + F+LE LE LGDSFLK A + L+ TY + EG LS + + +S
Sbjct: 1255 PTI-ILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVS 1313
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKM-WIIP 1066
N L LG ++ L ++ FDP + W+ P
Sbjct: 1314 NFNLYCLGDKKALAHKMQVSLFDPSINWLPP 1344
Score = 45.1 bits (105), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN-DCYALSSVKHGLHK 1241
+RLE LGD+ L +T YLY YP L G L+ +RS V+N + Y L K HK
Sbjct: 1274 ERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNLYCLGDKKALAHK 1329
>gi|283131646|dbj|BAI63215.1| Dicer [Hemicentrotus pulcherrimus]
Length = 1816
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 170/349 (48%), Gaps = 56/349 (16%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------------DFVNV 1135
+ K++AD VEALIG +L + G L+ + +G+ V ++
Sbjct: 1469 MSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGLDVLPAINDQSKKRNDQSSDLPAADL 1528
Query: 1136 P------YQRQFQ------------VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
P Y +Q + V ++LV E +NY F+D + L++A TH SY
Sbjct: 1529 PVSCLYGYLKQPESPLLRSVPNAEDVLQQQLVGYDGFEKTINYRFKDRAYLLQAFTHSSY 1588
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
I CYQRLEFLGDA+LDYLIT +LY+ + LSPG LTD+RSA VNN +A +VK
Sbjct: 1589 HRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKF 1648
Query: 1238 GLHKHILHASHELYKRIN---ITVDS-FEKLSLGSTFGWESVTS---------FPKALGD 1284
HK+ + +++ I+ VD+ E L + S + + PKALGD
Sbjct: 1649 NFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEVPKALGD 1708
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKK 1342
I ES+AGAI++DSG + V++ P+++ I + PVREL E + +
Sbjct: 1709 IFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPISPVRELLE--MEPETARFG 1766
Query: 1343 PVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
P I GK VTV V G+ + + AK A + L+ L++
Sbjct: 1767 PPEKTIDGKTRVTVNVVGKGQF---KGIGRNYHIAKATAARFALRHLKS 1812
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 173/677 (25%), Positives = 280/677 (41%), Gaps = 130/677 (19%)
Query: 383 RGVEDIRCIIFVERVITAIVLQSLLSELLPRH-------CT----WKTKYIAGNNSGIQC 431
R ++ IIFVE+ TA+V+ L +L R C+ + S IQ
Sbjct: 471 RSTTNLCGIIFVEQRYTAVVMSRLFKKLSKRDPNLHFLLCSCIAIGSGRLGTTKKSAIQV 530
Query: 432 QS-RKKQNEIVEEFRRGLVNVIVATSILEEGLDV---QSCNLVIMFDPSRTVCSFIQSRG 487
Q+ R+K E++ +FRR VNV+VATS +E+G+++ CNLV+ FD + S++QS+
Sbjct: 531 QNQRRKHEEVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPASYQSYMQSKA 590
Query: 488 RARMQNSDYLLMVKSGD-----STTQ-----SRLENYLASG-NKMRKEVL----SHASLP 532
+AR S YL+++ D S Q R+ N + G + ++EVL + +P
Sbjct: 591 KARAPTSHYLMLIYEPDVQLFLSDVQCYQEFERVLNRKSKGKTQPQEEVLDLLKADKQMP 650
Query: 533 CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG-- 590
N E A++++++ +I YC++LPSD + T + + G
Sbjct: 651 AYIPKN----------EEGSPRASMTTAIQIINRYCAKLPSDVFTHLTASCKMQERKGDV 700
Query: 591 ----ICTLYLPNNCPIQTVIAQGNIKTLK---QAACLEACKKLHQIGALTDNLLP---DI 640
TL LP N P++ I +K K A ++A LH+ G L D L P +
Sbjct: 701 SPEFQATLQLPINSPLRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQPMGKES 760
Query: 641 VVEK---------HDAQKRGNEPYNAEHPIYFPPELVN--QS--PQDTKITYHCYLIELK 687
+++ D Q R P + Y+ E+ Q PQ + CYL +
Sbjct: 761 ILKATDNAFNHLFADGQTR---PGTTKKRRYYDKEVAKCLQGCLPQADQ---PCYLYSVD 814
Query: 688 QHFN------YDISARNIVLAMRTE------LESEIKKV-NFDLEVERGRLTVNLK-HLG 733
+I R + T+ +I KV F + G L V++
Sbjct: 815 MSLASPLPDILNIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSITLESN 874
Query: 734 RIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLL--------- 784
I+L Q+ + F +F ++ LDK N L+ + + +YL++
Sbjct: 875 EIRLSGAQIRRAQSFHGCMFSEVL--RLDKPNLELNP----EKSQANYLIVPLKEGPARG 928
Query: 785 PSTG-QLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTP- 842
PS G +IDW + V S +++ T +++S + I V TP
Sbjct: 929 PSGGPSVIDWSFLEKVSL-----SSGHLDQPTQLPD---YSQSQFEFSTDILADAVVTPI 980
Query: 843 ----HNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREP------- 891
Q Y + +L L S F T+ +Y ERY IQ+ ++P
Sbjct: 981 YRNIDQPQRYFMADILYDLPVTSPFPSEK--YETFVDYYFERYDIQISNFQQPLVDVDCM 1038
Query: 892 -----LLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFV 946
LL R + H L Q +K + L PELC I PI S + +
Sbjct: 1039 SSRLNLLTPRYLNHKGKALPISTGQNKKGNLQKKQYLVPELCYIY--PIPASLWRKAVCL 1096
Query: 947 PSIMHRLQSLLLAVNLK 963
PSI++RL +LL+A L+
Sbjct: 1097 PSILYRLNALLIAEELR 1113
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 8/174 (4%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSPFVAVFLVPKVV 79
R+YQLE LE AL+QNT V L++G+ KT +A+ML++ + +R + +FLV
Sbjct: 39 RHYQLELLETALEQNTTVCLQSGTEKTFLAVMLIKELSGSVRLRLEDGGKRTIFLVNSES 98
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ + I HTDL V +Y + WD W++E+ V VM +I L L++SY
Sbjct: 99 YLSEYGNVIHTHTDLNVKEYRNREKMISWDKTRWQDEIEHCHVAVMDSEIFLKLLQMSYV 158
Query: 140 KLNMIKVLILDECHHA-RGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
L+M +LILDECHH + H Y IM F + + PRI G+T S +K
Sbjct: 159 GLSMFNLLILDECHHTLQHLHPYHQIMLAFN----QCPRDDRPRILGLTESILK 208
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
PTI +L+++T + F+LE LE LGDSFLK A + L+ TY + EG LS + + +S
Sbjct: 1256 PTI-ILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVS 1314
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKM-WIIP 1066
N L LG ++ L ++ FDP + W+ P
Sbjct: 1315 NFNLYCLGEKKALAHKMQVSLFDPSINWLPP 1345
Score = 45.1 bits (105), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN-DCYALSSVKHGLHK 1241
+RLE LGD+ L +T YLY YP L G L+ +RS V+N + Y L K HK
Sbjct: 1275 ERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNLYCLGEKKALAHK 1330
>gi|134081603|emb|CAK46537.1| unnamed protein product [Aspergillus niger]
Length = 1352
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 150/614 (24%), Positives = 272/614 (44%), Gaps = 96/614 (15%)
Query: 73 FLVPKVVLVPQQAE-------AIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLV 124
FL P V L QQ + A++ T + K V+ W + W + + +V+V
Sbjct: 51 FLTPTVALCLQQFKFLSDNIPAVRARTLTSLDK------VELWTEQPVWDAILKEMQVVV 104
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLET-GDSNLPRI 183
T +L D + + K+ + ++I DE HH +H IM +FYH LE G +P+I
Sbjct: 105 STHAVLADAMSHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKI 164
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD 243
G+TASP+ V S+ Q+ + +L+ + + T + + +
Sbjct: 165 LGLTASPV---VRSNRQELLKIESNLDAVCKTP----------------RTHRSELMTHT 205
Query: 244 EIPH--------ALYTHLADELAMIELKHT----RSLENLDLNEAQAELIRKKVSKINST 291
PH L L D+ + +L+ + R+L+ + E+ ++ + +
Sbjct: 206 HRPHLQQILFTPVLLDDLQDDPYIKKLRKSPLDGRALQKV--LESGKTYCNDQLKRFATR 263
Query: 292 LLYCLSELGVWLALKAAETISCYESDFF---AWEQLDGFGETIIKKFG-SDASQALVTYV 347
L+ ELG W A D+F + EQL G +D +A + +
Sbjct: 264 SLHIFEELGEWAA------------DYFIHASIEQLKARAGNSADTMGWTDEEKAYLLDI 311
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
S D + + D ++ K L+E L+ +G + +IF ++ T V++ LL
Sbjct: 312 VSKLPIPNIDLTHSDPDRIPISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLL 370
Query: 408 S-ELLPRH---CTWKTKYIAGNNSGI--QCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
S + +H C + G + + + + Q + + EFR G N+I+AT +LEEG
Sbjct: 371 SIHPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEG 430
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---------QSRLE 512
+D+ +C++V+ FD + SF+Q RGRAR + S Y +M + D ++ Q+ +E
Sbjct: 431 IDISACSVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIE 490
Query: 513 NYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLP 572
Y ++R+ + +N + + V+STG + T ++V+ + +C+ LP
Sbjct: 491 AYEDDERRLRE------AWALEAINEEVV--ERLEVQSTGAVLTADTAVAHLNHFCAVLP 542
Query: 573 SDGYFKPTPKFHINKE-----MGICTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACK 624
Y P+F K+ G TL + ++ + Q +T + A A +A K
Sbjct: 543 RQPYASNEPEFSYEKDDADLLRGTVTLPSCVHPGVRRIQGQRWWQTERAARKEAAFQAYK 602
Query: 625 KLHQIGALTDNLLP 638
+L++ G L+D+LLP
Sbjct: 603 RLYEFGLLSDHLLP 616
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 199/451 (44%), Gaps = 71/451 (15%)
Query: 896 RRIFHVQNYLSKCRQQKQKEP---SKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHR 952
R + H Q +K Q + P SKI L E C I P + + F F V I+ R
Sbjct: 819 RNLLHRQTLAAK--QPDSETPAISSKIRLILA-ENCTIDKLPYAETIFGRFISV--ILDR 873
Query: 953 LQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAA 1011
L++ L+A L +L +++ +I+ ++ AIT Q + + E GDS LK+
Sbjct: 874 LEATLVATRLCETIL----RDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTV 929
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S QLF + N HEG LS ++ I+ N+ L + + L FI + F P+ W P
Sbjct: 930 SCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP----- 984
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
KI +T +++ S K +ADVVEALIGA GG + R +V
Sbjct: 985 ---------LISEKISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEV 1035
Query: 1131 DFVNV-----PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC 1185
+ N+ P + + +N HL + + Y+F + SLLVE+LTH S +
Sbjct: 1036 NLENIDRTTAPMPKDGVTN--HTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQS 1093
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH--- 1242
YQRLEFLGDAVLD I L + + G +T ++ A VN + A ++ L +
Sbjct: 1094 YQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTN 1153
Query: 1243 ---------ILHASHE----------------------LYKRINITVDSFEKLSLGSTFG 1271
L+ S E L + ++ L ++
Sbjct: 1154 VQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYP 1213
Query: 1272 WESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
W+S++ K DIIES+ GAIF+DS N
Sbjct: 1214 WKSLSQLNADKFFSDIIESILGAIFIDSHGN 1244
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 1061 KMWIIPG-DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
K W++ G D++ EL D++ R + R+ + +K A+ +
Sbjct: 795 KRWVVSGQDDTPIVELECDAVPKRRNLL--HRQTLAAKQPDSETPAI--------SSKIR 844
Query: 1120 LIFLDRIGI-KVDFVNVPYQRQFQVHAERL----VNVRHLESLL-NYSFRDPSLLVEALT 1173
LI + I K+ + + R V +RL V R E++L + F ++ A+T
Sbjct: 845 LILAENCTIDKLPYAETIFGRFISVILDRLEATLVATRLCETILRDLEFSSIRHIITAIT 904
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
S + YQR EF GD+VL + ++ L+ ++P GYL++ R V N A +
Sbjct: 905 APS---AQSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARA 961
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAI 1293
++ GL I++ K + EK+SL + T K L D++E+L GA
Sbjct: 962 ALDAGLDAFIMNKMFTPRKWSAPLIS--EKISLTP----KQRTMSTKVLADVVEALIGAS 1015
Query: 1294 FVDSG 1298
++D G
Sbjct: 1016 YIDGG 1020
>gi|194225335|ref|XP_001496219.2| PREDICTED: endoribonuclease Dicer [Equus caballus]
Length = 1785
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 1531 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1590
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 1591 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 1646
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1647 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 1706
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 1707 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 1760
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 1761 RIAKSAAARRALRSLKANQP 1780
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 26/272 (9%)
Query: 391 IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR--------KKQNE 439
IIFVER TA+VL L+ E P + +I G+ G + Q R +KQ E
Sbjct: 309 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 367
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S+Y+++
Sbjct: 368 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 427
Query: 500 VKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY-----HVESTGT 553
+ + + L+ Y A +R + + + + +D + E G
Sbjct: 428 ADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDVFPPYVLRPEDGGP 487
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG----ICTLYLPNNCPIQTVI--- 606
T+++++ I YC+RLPSD + PK +E+ TLYLP N P++ I
Sbjct: 488 RVTVNTAIGHINRYCARLPSDPFTHLAPKCR-TRELPDGTFYSTLYLPINSPLRASIVGP 546
Query: 607 AQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
I+ ++ L C+KLH+IG L D+L+P
Sbjct: 547 PMSCIRLAERVVALICCEKLHKIGELDDHLMP 578
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1162 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1221
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1222 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1255
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1158 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1210
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1211 MRSKKVSN 1218
>gi|301770225|ref|XP_002920522.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Ailuropoda melanoleuca]
Length = 1931
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 168/378 (44%), Gaps = 83/378 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F
Sbjct: 1555 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQ 1614
Query: 1145 AERLVNVR----------------------------------------------HLESLL 1158
+ L R + E +
Sbjct: 1615 QKNLSGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1674
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI----TVDSFEKLSL--GSTFGW 1272
D+RSA VNN +A +V H+ +K ++ +D F + L G
Sbjct: 1735 DLRSALVNNTIFASLAVXXXXXXXXXXDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1794
Query: 1273 ES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPE 1319
+S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 1795 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKF 1854
Query: 1320 TMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKT 1376
+ PVREL E + FS P GK VTVEV G+ + +
Sbjct: 1855 SANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRI 1908
Query: 1377 AKKVACKEVLKSLRASFP 1394
AK A + L+SL+A+ P
Sbjct: 1909 AKSAAARRALRSLKANQP 1926
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R S
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRSG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKEKWSQEFMKHQVLVMTC 152
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+T
Sbjct: 153 YVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLT 206
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
AS + K E + +KI LE ++ S T VL +
Sbjct: 207 ASILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY 246
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 391 IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR--------KKQNE 439
IIFVER TA+VL L+ E P + +I G+ G + Q R +KQ E
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S+Y+++
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 500 VKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY-----HVESTGT 553
+ + + L+ Y A +R + + + +D + + G
Sbjct: 564 ADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEPDIEPVVDDDDVFPPYVLRPDDGGP 623
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG----ICTLYLPNNCPIQTVIA-- 607
T+++++ I YC+RLPSD + PK +E+ TLYLP N P++ I
Sbjct: 624 RVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELPDGTFYSTLYLPINSPLRASIVGP 682
Query: 608 -QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
++ ++ L C+KLH+IG L D+L+P
Sbjct: 683 PMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1391
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1294 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1346
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1347 MRSKKVSN 1354
>gi|402217569|gb|EJT97649.1| ribonuclease III [Dacryopinax sp. DJM-731 SS1]
Length = 1400
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 219/493 (44%), Gaps = 101/493 (20%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL 982
L PELC + +SLS++ + +PS+M R++ +LL +++ + V + L
Sbjct: 808 LMPELC--VKYCLSLSSYRTSMILPSVMARVEEMLLVQECNSVVFHDRLDEVFL-----L 860
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC- 1041
A+T+ + + LE LGDSFLKY +S LF T + EG L + ++RIISN+AL
Sbjct: 861 PALTSPSAGAGYDYQRLELLGDSFLKYISSIFLFVTCPQDGEGSLHIHRQRIISNSALQF 920
Query: 1042 ---KLGCEQKLPGFIRTESFDPKMWIIP-------------------------------- 1066
++G +LP +I++ P+ W P
Sbjct: 921 HSDRVG---QLPQYIQSRQHSPRQWCPPNFLLYHPCMASALDTSEKFIQGMEERIEASND 977
Query: 1067 GDNSG-------------SYELN-----DDSLFNGRKIYVTGRKK----------VKSKT 1098
G +G S++ N D+S + + + R++ + K+
Sbjct: 978 GPTAGGSPPESGVTKALESHQANAETSPDNSTVSRSPMPYSARERALMREEQHQELGDKS 1037
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKV----------DFVNVPYQRQFQVHAERL 1148
VADV EA++GA TG + L +G+ + D ++ + + +
Sbjct: 1038 VADVAEAVLGAAWLTGQREMALYVCHILGLPMTRMGSWDFLRDHAHIFFHEELDIGPLSQ 1097
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
V +E++L + F++P L ALTH S + P CY+RLEF+GDA+LD++ LY +
Sbjct: 1098 PKVEAVEAILGHKFKNPFLAATALTHSSMSSTDFP-CYERLEFIGDAILDFVTVRLLYMR 1156
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
+ L G+LT ++ A V+N A V GLH +I+H S L + ++ K
Sbjct: 1157 WGELHEGWLTMLKGAIVSNAALAAFCVDLGLHHYIIHDSPHLVETVSSYAKEITKAKEED 1216
Query: 1269 TFG-----------WESVTSFPKALGDIIESLAGAIFVDSGCNR---EVVFQSI-RPLLE 1313
W ++ PK L DI+E+L GAI+V + E VF + +P
Sbjct: 1217 LAAAAAEDRAPGEYWVTLEP-PKVLSDIVEALLGAIYVSDSFDPSGYENVFDRLFKPFFM 1275
Query: 1314 PMITPETMRFHPV 1326
++ T+ HP
Sbjct: 1276 KRVSLNTLSQHPT 1288
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 389 RCIIFVERVITAIVLQSLL---SELLPRHCTWKTKYIAGNNSGIQCQSRK--KQNEIVEE 443
R IIFV R TA L LL +++LP + + + G+++ + + + + +
Sbjct: 240 RGIIFVYRRTTAKALADLLNRNAQVLP---NVRARPLIGSSAVLMDPNADHLTKTQATTQ 296
Query: 444 FRRGLVNVIVATSILEEGLD--VQSCNLVIMFDPSRTVCSF-IQSRGRARMQN-----SD 495
FR G +N++V T I G+D V+ C++VI+FD SF + G+ R + S
Sbjct: 297 FRDGTINLLVTTGI---GVDLSVERCSIVIVFD------SFSAHAAGQLRQSHLLKITSI 347
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH----VEST 551
+L++++ G L +L +K + E S P + + ED V T
Sbjct: 348 FLILIEKGKQKDIQALSAFLPRRSKEKSEEESTPPAAEHPRSTGIDSEDEDQASILVPET 407
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI---NKEMGICTLYLPNNCPIQTVIAQ 608
G + ++ ++ Y S + +H+ N + CT+ P + ++ V ++
Sbjct: 408 GARVSALDALQVLTRYVS-IKEKSAVSLNVDYHVMGENNRIFRCTIRFPPSAELEDVTSE 466
Query: 609 ---GNIKTLKQAACLEACKKLHQIGAL 632
+QAA + AC++L+ G L
Sbjct: 467 SCPSKAAARRQAAYM-ACEELNARGLL 492
>gi|390601319|gb|EIN10713.1| ribonuclease III [Punctularia strigosozonata HHB-11173 SS5]
Length = 704
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 225/502 (44%), Gaps = 75/502 (14%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
+PLL R+ N+L+ + + L P+LC P S+ F + ++PS+
Sbjct: 116 QPLLQVTRLGGSVNFLNPLLSGPDESHKADAKYLIPQLCPKFSIPASI--FKTGLYLPSL 173
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKY 1009
R+ +LL L +L + + LEAIT +F+ E LE LGD+FLKY
Sbjct: 174 ARRIDEMLLVKELNAEILHDLVGEQLL-----LEAITPPSASAEFNYERLELLGDAFLKY 228
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWII---- 1065
AS ++ T Q EG L ++++I+N L LP +I++ +F K W
Sbjct: 229 LASVYVYVTRQGG-EGALHNARQKLIANDYLMDCAVRVGLPPYIQSAAFAYKYWAPHNVR 287
Query: 1066 ----PGDN---SGSYELNDDSLFNGRKIYVTG---RKKVK----------SKTVADVVEA 1105
P D+ S + N + K G ++K K K +ADVVEA
Sbjct: 288 VLARPTDDMTCGPSQDANGEKSIEEPKKEDAGIPSKRKAKFDPNTSQWLGHKAIADVVEA 347
Query: 1106 LIGAFLSTGGENVGLIFLDRIGIKV-------DFVNV----PYQRQFQVHAERLVNVRHL 1154
+IGA GG + L + +GI + DF + P Q + ++ +V L
Sbjct: 348 IIGAAYLNGGSDNALQTVLDLGIDLSGISSWTDFRRLSASDPGHPQLVLPSQSVV---EL 404
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
+L D LL AL G + +P QRLEFLGDA+L+YL+ YLY+K SP
Sbjct: 405 SRILGRPVNDRQLLAHALACGG-LTGAVPILRQRLEFLGDAILEYLLIRYLYSKNQSSSP 463
Query: 1215 GYLTDMRSASVNNDCYALSSVKHGLHKHIL-HASHELYKRINITVDSFEKLSLGSTFG-- 1271
G L+ + V+ND A V G+++H+L ELY+ T ++ KL L
Sbjct: 464 GILS---AGMVSNDALAALCVTSGIYEHLLVDRRSELYR----TTQNYRKLILQRQQAEN 516
Query: 1272 -------------WESVTSFPKALGDIIESLAGAIFVDSGC---NREVVFQSI-RPLLEP 1314
W V + PK L D +E+ GA++V G ++VF+ + +P +
Sbjct: 517 AAARAELRSPGQFWHDVPA-PKVLSDAMEATLGALYVSDGFTADGTQIVFERLFKPFYDR 575
Query: 1315 MITPETMRFHPVRELTEYCQKN 1336
+T +T+ HP + L E QK
Sbjct: 576 HVTLQTLSHHPNKILAELLQKQ 597
>gi|15150411|gb|AAK84929.1| SD01621p [Drosophila melanogaster]
Length = 865
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 168/362 (46%), Gaps = 84/362 (23%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF------------ 1141
+ K++AD VEALIGA+L G L+F+ +G++V +P RQ
Sbjct: 514 IPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDGGNQEQRIPGS 569
Query: 1142 -QVHAERLVNV-----------------------------RHLESLLNYSFRDPSLLVEA 1171
+ +AE +V V E L Y FRD S L++A
Sbjct: 570 TKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQA 629
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 630 MTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFA 689
Query: 1232 LSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF---------------GWESVT 1276
+V+HG HK H S L N +D F ++ + E V
Sbjct: 690 SLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDV- 744
Query: 1277 SFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HPVRELT 1330
PKALGD+ ES+AGAIF+DS + +VV+ + M++PE +F P+REL
Sbjct: 745 EVPKALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSNSVPKSPIRELL 800
Query: 1331 EYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKS 1388
E + KP + VTV+V G TF + + + AK A K L+
Sbjct: 801 E-LEPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAKCALRQ 854
Query: 1389 LR 1390
L+
Sbjct: 855 LK 856
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 339 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 397
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 398 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 428
Score = 40.4 bits (93), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 331 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 387
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 388 LSHLRSKQVAN 398
>gi|391345092|ref|XP_003746827.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1446
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 178/368 (48%), Gaps = 38/368 (10%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L A+T Q+ + E E LGDSFLK A + LF EG L+ ++ R+ISN L
Sbjct: 1009 ILTALTPSSAQDVVNSERFEVLGDSFLKIAVTLHLFPREDLPDEGTLTAERCRLISNMNL 1068
Query: 1041 CKLGCEQKLPGFIRTESFDPK-MWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
KL +K+ + + F + + +PG S E N L ++Y KSK
Sbjct: 1069 LKLAVPKKIHEAVESRIFSARESFRVPG--MISREGNKLQL----QVY-------KSKIC 1115
Query: 1100 ADVVEALIGAFLSTGGENVGL----------------IFLDRIGIKVDFVNVPYQRQFQV 1143
AD VEA+IG +L G L FL R + D V +
Sbjct: 1116 ADSVEAMIGVYLERSGPIGALEFLRYLGLSLSDSDSGSFLSRFDLSYDPVVGGNHDYISI 1175
Query: 1144 HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
V R +ES+L Y F++ L+EA+TH SY + Y+RLEFLGDAV+DYL++
Sbjct: 1176 RRHNDVMSR-VESILGYRFKNRLYLLEAITHQSYN-NRVTHSYERLEFLGDAVIDYLVSC 1233
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
+++ P L PG LT +RSA V N+ +A K GL + +LH S L++ + ++ E
Sbjct: 1234 FIFTNDPHLGPGQLTSVRSALVCNNQFAQIVTKAGLSRCLLHRSPLLFRMMTSYTEAVEI 1293
Query: 1264 LSLGSTFGWESVT------SFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
+F + T PK GD++ESL GA+F+DS + + R L+ +
Sbjct: 1294 GRPCDSFIGDDETEDADLVDAPKPFGDLMESLIGAVFIDSNQDFSRTWDVFRGLMGDRVL 1353
Query: 1318 PETMRFHP 1325
ET++ +P
Sbjct: 1354 LETLKDNP 1361
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP-FVAVFLVPKVVL 80
AR+YQ+E L A+++N I+ L TG+GKT ++++L++ Y R +VFL P V L
Sbjct: 25 ARDYQIELLLKAVERNIIICLGTGTGKTFVSVLLIKELLYETRPDGGNRRSVFLAPTVPL 84
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
V QQA IK+H D +VG Y+G VD W + W+ E+ K+ VLVM PQ+ + L ++
Sbjct: 85 VKQQAAVIKIHVDAEVGCYFGGDTVDNWQESEWRREIEKNNVLVMVPQVFSNILNQNFIN 144
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
L+ I +++ DECH A G+ Y IM Y ++ G PRI G+TAS + KV +++
Sbjct: 145 LDQINLMVFDECHAATGQSCYVQIMQNHYVKM---GPEKRPRILGLTASVLNKKVKTTQ- 200
Query: 201 DYWQKIHDLETLMNSKVYTCAS 222
+I L + ++S + T S
Sbjct: 201 -VRSEIRGLCSRLDSTLATSMS 221
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 147/331 (44%), Gaps = 46/331 (13%)
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
P A+ DD +F++ L +++ + E+ + ++ C++F T L +L
Sbjct: 337 PGAADTIPADDLEFSVPPKL--RRLLNIFETFRDCG--RELCCVVFARERYTVFALWCVL 392
Query: 408 SELLPRHCTW----KTKYIAG-NNSGIQCQSRK-----------KQNEIVEEFRRGLVNV 451
+ L +H + ++ G NS ++C+ K + +E FR G+ NV
Sbjct: 393 TTLSRKHPQRFGFIRPGFVMGAGNSSLKCEETKIVDFADEGFVENEGSTLENFRTGVHNV 452
Query: 452 IVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST-TQSR 510
+VATS++EEG+DV CNL++ + S++Q RGRAR + S Y ++V + + S
Sbjct: 453 LVATSVIEEGVDVPQCNLIVRMNGDMNFRSYVQGRGRARAKPSIYAILVAATSAAKVNSD 512
Query: 511 LENYLASGNKMRKEVLSHA-----------SLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
+ ++ + + + H +L P +Y + S I T S
Sbjct: 513 IGDFKVTEQIITRYCQEHDMDVMCESDVELALEGDPDLPTIYANPEDPLNSA--IITAQS 570
Query: 560 SVSLIYFYCSRLPSDGY--FKPTPKFHI------NKEMGICTLYLPNNCPIQTVIAQGNI 611
+ S++ +YC L +D + +P +H N+ C++ LP + G
Sbjct: 571 ARSVLQWYCDTLGNDRFQVMRPLISYHSRPSKNQNEVESRCSILLPKASKLYPEEVYGKW 630
Query: 612 KTLKQ----AACLEACKKLHQIGALTDNLLP 638
K +A L CK+L+++ LT+NL+P
Sbjct: 631 LPSKPKSRVSAALATCKRLYELDELTENLVP 661
>gi|302662009|ref|XP_003022664.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
gi|291186623|gb|EFE42046.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
Length = 1510
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 213/469 (45%), Gaps = 61/469 (13%)
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
++ C +P+L I +N+L + QK P + + + E +I + L+T
Sbjct: 947 MKRCNWDQPVLRSELIQLRRNFLDI--DENQKSPP-VDYYVCAEALKISAISVPLAT-QI 1002
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------ 995
F F P+++ R++S L+A L+ C + + IP LEA+T + H
Sbjct: 1003 FVF-PAMIWRMESYLIA-------LEACEKLQLKIPPELALEALTKDSENTEEHGMEQIR 1054
Query: 996 --------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGD FLK A S LF +N E VK+ +I N L
Sbjct: 1055 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIIL 1114
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTG-RKKVKSKTVADVVE 1104
++ FIR+ SF + W G +L G+ K G + KT+ADV E
Sbjct: 1115 EIFKFIRSRSFSRRAWYPEGL----------TLLKGKDKKEGPNGPEHALADKTIADVCE 1164
Query: 1105 ALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VNVPYQRQFQVHAERLV 1149
ALIGA L GG + +F++ R+ D+ ++P + A +
Sbjct: 1165 ALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASASASEID 1224
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++S L Y F+ P LL A H SY +P CYQRLEFLGD++LD + +L+
Sbjct: 1225 VANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFE 1283
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL- 1266
+YP P +LT+ + A V+N +V LH H++H S+ L +I + + + +
Sbjct: 1284 RYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIK 1343
Query: 1267 --GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
G+ W PK L DI+E+ GAIFVDS N +VV R ++
Sbjct: 1344 MEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVVDDFFRKFIQ 1392
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 171/653 (26%), Positives = 284/653 (43%), Gaps = 124/653 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL-- 80
R YQLE E A ++N I LETGSGKTLIA++LL+ +++ + ++ L P++
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLK---HVIEQELTDRSLGLPPRISFFL 168
Query: 81 --VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
+PQ K+ K+ G M D W+ TW+ ++ V+V T ++L L S+
Sbjct: 169 NNIPQ-----------KIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSF 217
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+++ I +LI DE HHA+ +H YA I+ +FY + E P+IFGMTASP+ +KV
Sbjct: 218 IQIDQINLLIFDEAHHAKKEHPYARIIKDFYLKEPERK----PKIFGMTASPVDAKV--- 270
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADE 256
+ LE +++S++ T ++ ++L + T + Y E+P LY+ L +
Sbjct: 271 --EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSKLRQK 328
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
I++ LE + K S+ S S LG W +
Sbjct: 329 FGDIKV-----LEKI-----------FKFSRETS------SSLGSWCS------------ 354
Query: 317 DFFAWEQLDGFGETIIKKFGSDASQALVTYVP--------------SGA---EWSIGDDS 359
W E + K + +++ L+ +P +GA E GD
Sbjct: 355 ---DWIWSYCLSEETLPKLEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFGDPV 411
Query: 360 KFNLDSGLLTEKI-VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ LL+ K+ + + L ++ D RCI+F + TA +L+ L ++
Sbjct: 412 A---NPELLSRKVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKI-------G 461
Query: 419 TKYIAGN-NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG---LDVQSCNLVIMFD 474
++YI N G++ K +I FR +NVI + E + + + FD
Sbjct: 462 SQYIRPNLLVGVRSGGDKIGLDI--SFREQFLNVIAFRKVNESNEYLIPGLGTDFNLRFD 519
Query: 475 PSRTVCSFIQSRGRARMQNSDYLL------MVKSGDSTTQSRL--ENYLASGNKMRKEVL 526
T+ +IQSRGRAR S + +V++ T + + N L + +EVL
Sbjct: 520 LYSTLIQYIQSRGRARHMESTVCITYLEVSLVQTNIFTQFAHMVERNNLMHETAVEEEVL 579
Query: 527 SH--ASLPCSPLNNHMYGEDF----------YHVESTGTIATLSSSVSLIYFYCSRLPSD 574
+ SLP L D Y ++STG T SS++++ Y S L +
Sbjct: 580 TRFCKSLPEDRLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYE 639
Query: 575 GYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEAC 623
+ I+ + G IC LP PI+ + + + L KQ+A E C
Sbjct: 640 KELSTQVSYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 692
>gi|347835506|emb|CCD50078.1| similar to dicer-like protein 2 [Botryotinia fuckeliana]
Length = 1378
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 165/642 (25%), Positives = 274/642 (42%), Gaps = 90/642 (14%)
Query: 55 LLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHT-DLKVGKYWGDMGVDFW-DGAT 112
+LR A L R + FL P V L Q E ++++ + + G GVD W +
Sbjct: 23 VLRILAELERMKPGKIIWFLAPTVALCAQHHEYLQLNIPSVLIKMLIGADGVDRWTEQRQ 82
Query: 113 WKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL 172
W + +V+V + Q+LLD L + ++ + ++I DE H+ K A IM FYH
Sbjct: 83 WDTVLKDVKVVVSSYQVLLDALTHGFVRMGRLSLIIFDEAHNCVNKAPGAKIMKSFYHPY 142
Query: 173 LETGDSNLPRIFGMTASPIKSKVSSSEQDYWQ---------KIH--DLETLMNSKVYTCA 221
LP I G++ASP+ S D + KIH DL + + +
Sbjct: 143 KSI--FPLPHILGLSASPVMRSSPQSLSDIEETLDAICCTPKIHRADLRLRVKLPLLSII 200
Query: 222 SESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELI 281
+ SN I T A + L + E + +L+ D ++Q EL
Sbjct: 201 YYTPESNIIVTKTV------------ASLRKIVQSLNIFEDPYVLTLKRSDSEKSQRELA 248
Query: 282 R-------------KKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFG 328
+ K + K ++ ++ L ELG W A T+ + +
Sbjct: 249 KVLKSFKTYSQTQLKSIDKTSNEII--LVELGPWAADYYISTVVTR------YLKAMSAK 300
Query: 329 ETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI 388
+T I + A + + E S S D+G ++ K+ L+ + + +
Sbjct: 301 DTFIVEDSPAAEKLYIAKALRQVEISPSTLS----DTGKISNKVEKLLGIIAQQK--PPF 354
Query: 389 RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK-----------KQ 437
IIFV+ T S+L+ LL H K ++ G G ++ +Q
Sbjct: 355 SAIIFVQERATV----SVLAHLLSHHPLTKDRFKIGTMVGTSLNGKRTDQIGELVDVNQQ 410
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
+ + F+RG +++++AT++LEEG+DV +CNLVI F + SF+Q RGRAR Q+S +
Sbjct: 411 KDTLSSFKRGKIDILIATNVLEEGIDVPACNLVICFSKPANLKSFVQRRGRARQQDSKLI 470
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEV------LSHASLPCSPLNNHMYGEDFYHVEST 551
L+ SGD T N+ KMR+E L H + + +EST
Sbjct: 471 LLDASGDKAT-----NWHELERKMREEYGKEMRELQHI-YEIETADEQSEDDRVLRIEST 524
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI----CTLYLPNNC--PIQTV 605
G L S++ +Y +CS L + + P F + E+G + LP + P++
Sbjct: 525 GAQLDLDSALPHLYHFCSVLTTKDFVDLRPDFVYSSELGSEYVRAKVILPGSVSKPLRVH 584
Query: 606 IAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLPDIVVEK 644
++G+ + + A A EA L++ G + DNLLP +V +K
Sbjct: 585 ESRGSWLSERSAAKDAAFEAYSALYRGGLVNDNLLPLMVHDK 626
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 224/491 (45%), Gaps = 78/491 (15%)
Query: 891 PLLNGRRIFHVQNYLSKCRQQKQKEPSK-ISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
P L ++ ++L K + +K +K S LP C + P LS F +PSI
Sbjct: 819 PYLAVVKVSRRADFLHKVQNEKPSSFTKQFSSVLPASTCVQDVMPAQLSRF--GMMIPSI 876
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE-AITTKKCQEDFHLESLETLGDSFLK 1008
H ++ L+ L +L +++ I +++ AIT D + + LE LGDS LK
Sbjct: 877 THHIEVQLVVDRLSRTIL----KDLEISDQSLIQTAITHASYSLDSNYQRLEFLGDSILK 932
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD 1068
S QL + + HEG LS K+RI+SN+ + E L +I T+ F W
Sbjct: 933 LCTSVQLVAEHLDWHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKW----- 987
Query: 1069 NSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI 1128
DD + +K +++ SK ++DVVEALIGA + GG L L
Sbjct: 988 ---RPMYVDDLVVTEQKT-----REMSSKILSDVVEALIGACMVDGGIPKALKSLQLFFP 1039
Query: 1129 KVDFVNVPYQRQ--FQVHAERL---VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP 1183
+++++ + ++ +Q A L + +R +E +L Y+F SLLVEA+TH SY
Sbjct: 1040 ELNWLPLETRQMTLYQQAANDLHLPIALRPVEQILAYTFTKKSLLVEAMTHPSYT--SGT 1097
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
+ +RLEFLGD++LD +I +++ LS ++ +RSA VN D A ++ + +++
Sbjct: 1098 QSLERLEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNADFLAFLCMEMSIDQNV 1157
Query: 1244 L-------HASHELYKRINITVDSF---------------------------EKLSLGST 1269
H HE + R +++ SF E + G T
Sbjct: 1158 TNLTEGKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRHAELRDQILEAIYTGDT 1217
Query: 1270 FGWESVTSFP--KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR----- 1322
F W ++ K D+IESL GA+++DSG + EV Q L+E M MR
Sbjct: 1218 FPWALLSRLDARKFFSDMIESLLGAVWIDSG-SMEVCTQ----LIERMGVLRYMRRILKD 1272
Query: 1323 ----FHPVREL 1329
HP EL
Sbjct: 1273 GVRIMHPKEEL 1283
>gi|302511053|ref|XP_003017478.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
gi|291181049|gb|EFE36833.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
Length = 1510
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 213/469 (45%), Gaps = 61/469 (13%)
Query: 883 IQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYS 942
++ C +P+L I +N+L + QK P + + + E +I + L+T
Sbjct: 947 MKRCNWDQPVLRSELIQLRRNFLDI--DENQKSPP-VDYYVCAEALKISAISVPLAT-QI 1002
Query: 943 FTFVPSIMHRLQSLLLAVNLKNMLLDHCMQ-NVTIPTIKVLEAITTKKCQEDFH------ 995
F F P+++ R++S L+A L+ C + + IP LEA+T + H
Sbjct: 1003 FVF-PAMIWRMESYLIA-------LEACEKLQLKIPPELALEALTKDSENTEEHGMEQIR 1054
Query: 996 --------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGD FLK A S LF +N E VK+ +I N L
Sbjct: 1055 FQSGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIIL 1114
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTG-RKKVKSKTVADVVE 1104
++ FIR+ SF + W G +L G+ K G + KT+ADV E
Sbjct: 1115 EIFKFIRSRSFSRRAWYPEGL----------TLLKGKDKKEGPNGPEHALADKTIADVCE 1164
Query: 1105 ALIGAFLSTGGEN--------VGLIFLD----RIGIKVDF---VNVPYQRQFQVHAERLV 1149
ALIGA L GG + +F++ R+ D+ ++P + A +
Sbjct: 1165 ALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASASASEID 1224
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
++S L Y F+ P LL A H SY +P CYQRLEFLGD++LD + +L+
Sbjct: 1225 VANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVP-CYQRLEFLGDSLLDMVCVNHLFE 1283
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL- 1266
+YP P +LT+ + A V+N +V LH H++H S+ L +I + + + +
Sbjct: 1284 RYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIK 1343
Query: 1267 --GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
G+ W PK L DI+E+ GAIFVDS N +VV R ++
Sbjct: 1344 MEGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNFDVVDDFFRKFIQ 1392
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 173/653 (26%), Positives = 286/653 (43%), Gaps = 124/653 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL-- 80
R YQLE E A ++N I LETGSGKTLIA++LL+ +++ + ++ L P++
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLK---HVIEQELTDRSLGLPPRISFFL 168
Query: 81 --VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
+PQ K+ K+ G M D W+ TW+ ++ V+V T ++L L S+
Sbjct: 169 NNIPQ-----------KIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSF 217
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+++ I +LI DE HHA+ +H YA I+ +FY + E P+IFGMTASP+ +KV
Sbjct: 218 IQIDQINLLIFDEAHHAKKEHPYARIIKDFYLKEPERK----PKIFGMTASPVDAKV--- 270
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH--ALYTHLADE 256
+ LE +++S++ T ++ ++L + T + Y E+P LY+ L +
Sbjct: 271 --EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSKLRQK 328
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
I++ LE + K S+ S S LG W S
Sbjct: 329 FGDIKV-----LEKI-----------FKFSRETS------SSLGSWC------------S 354
Query: 317 DFFAWEQLDGFGETIIKKFGSDASQALVTYVP--------------SGA---EWSIGDDS 359
D+ W E + K + +++ L+ +P +GA E GD
Sbjct: 355 DWI-WSYC--LSEETLPKLEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFGDPV 411
Query: 360 KFNLDSGLLTEKI-VCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ LL+ K+ + + L ++ D RCI+F + TA +L+ L ++
Sbjct: 412 A---NPELLSRKVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKI-------G 461
Query: 419 TKYIAGN-NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG---LDVQSCNLVIMFD 474
++YI N G++ K +I FR +NVI + E + + + FD
Sbjct: 462 SQYIRPNLLVGVRSGGDKIGLDI--SFREQFLNVIAFRKVNESNEYLIPGLGTDFNLRFD 519
Query: 475 PSRTVCSFIQSRGRARMQNSDYLL------MVKSGDSTTQSRL--ENYLASGNKMRKEVL 526
T+ +IQSRGRAR S + +V++ T + + N L + +EVL
Sbjct: 520 LYSTLIQYIQSRGRARHMESTVCITYLEVSLVQTNIFTQFAHMVERNNLMHETAVEEEVL 579
Query: 527 SH--ASLPCSPLNNHMYGEDF----------YHVESTGTIATLSSSVSLIYFYCSRLPSD 574
+ SLP L D Y ++STG T SS++++ Y S L +
Sbjct: 580 TRFCKSLPEDRLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYE 639
Query: 575 GYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEAC 623
+ I+ + G IC LP PI+ + + + L KQ+A E C
Sbjct: 640 KELSTQVSYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 692
>gi|195502701|ref|XP_002098342.1| GE24009 [Drosophila yakuba]
gi|194184443|gb|EDW98054.1| GE24009 [Drosophila yakuba]
Length = 2250
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 167/367 (45%), Gaps = 82/367 (22%)
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF----QV 1143
+ + + K++AD VEALIGA+L G L+F+ +G++V +P RQ Q
Sbjct: 1893 LVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRV----LPITRQLDEASQE 1948
Query: 1144 H---------AERLVNV-----------------------------RHLESLLNYSFRDP 1165
H E +V V E L Y FRD
Sbjct: 1949 HRIPGSTKPNPENMVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFDEFEESLGYKFRDR 2008
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 2009 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2068
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV---------- 1275
NN +A +V+HG HK H S L N +D F ++ +
Sbjct: 2069 NNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHSISEEYYLLSEEECD 2124
Query: 1276 ----TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------HP 1325
PKALGD+ ES+AGAIF+DS + +VV+ + M++PE +F P
Sbjct: 2125 DAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWH----VYSNMMSPEIEQFSNSVPKSP 2180
Query: 1326 VRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACK 1383
+REL E + KP + VTV+V G TF + + + AK A K
Sbjct: 2181 IRELLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAK 2234
Query: 1384 EVLKSLR 1390
L+ L+
Sbjct: 2235 CALRQLK 2241
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 384 GVEDIRCIIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--R 434
G + + +I+ + TA VL LL+E+ R C + T +A + +
Sbjct: 487 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEH 546
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
++Q E+++ FR NV++ TS+LEEG+DV CNLV+ +DP T S++Q +GRAR +
Sbjct: 547 RRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA 606
Query: 495 DYLLMV 500
++++V
Sbjct: 607 YHVILV 612
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1724 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1782
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 1783 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 1813
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGIC----TLYLPNNCPIQT 604
TG L ++++L+ YC+RLPSD + K T + N+ G+ TL LP N P++
Sbjct: 815 TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLYQYTLRLPINSPLKH 874
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+AC +LH+IG L D L P
Sbjct: 875 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQP 911
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 29/300 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRARQRG-RVSVYLSCEVGTST 76
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ M H TDL+V + DM + F W + + V ++ P+ L L
Sbjct: 77 EPCSIYTMLTHLTDLRVWQEQPDMQIPF--DHCW----TDYHVSILRPEGFLSLLEDREL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
L+ +++++L++CH + Y I F ++ + PRI G+ A P+ S
Sbjct: 131 LLSSVELIVLEDCHDS---AVYQRIRRLFEEHIMPAAAVDRPRILGL-AGPLHS-AGCEL 185
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF------YKYDEIPHALYTHL 253
Q + LE +N ++ T S + + + + ++ Y+ DE+ L L
Sbjct: 186 QQLSAMLATLEQSVNCRIETA---SDIVTVLRYCSRPHEYIVQCAPYEMDELSLVLADVL 242
Query: 254 ADELAMIELKHTRSLENLDLNEAQAEL---IRKKVSKIN--STLLYCLSELGVWLALKAA 308
+ + E ++ EL KV +N ++LL L E+G W +AA
Sbjct: 243 NTHKSFLLDHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLAVLHEMGPWCTQRAA 302
Score = 40.0 bits (92), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1716 LVGHPGPSPSIILQALTMSNA---NDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1772
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1773 LSHLRSKQVAN 1783
>gi|396464039|ref|XP_003836630.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
gi|312213183|emb|CBX93265.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
Length = 1393
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 170/675 (25%), Positives = 293/675 (43%), Gaps = 101/675 (14%)
Query: 15 SADTLPFA-RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF 73
++D PF R+YQ E +E +L+QN IV V F
Sbjct: 13 TSDGEPFRLRSYQTEMVEESLQQNIIV-----------------------------VVWF 43
Query: 74 LVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILL 131
L P V L QQ E K + + G GVD W D TW + +++ T Q+LL
Sbjct: 44 LAPSVTLCEQQYEVFKYNLPGYGIQVLSGKDGVDHWTDQGTWDAVLHNVRIVLSTHQVLL 103
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD--SNLPRIFGMTAS 189
D L ++ +++ + +LI DE H+ H IM++FY + D S +P+I G++AS
Sbjct: 104 DALTHAFVRMSKLALLIFDEAHNCTLNHPARRIMSDFYKPFADAADPKSPVPKILGLSAS 163
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNS-KVYTCASESVLSNFI---PFSTAKFKFYKYDEI 245
P+ K +++++ Q +L + + K+Y S L F+ + ++
Sbjct: 164 PVM-KAAATKEALEQIERNLRAIARTPKIY----RSELMRFVHKPEVLQVSYPPPSPSDV 218
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKI-NSTLLYCLSELGVWLA 304
L L L E+K + L + + +RK++ K+ S YC ++ LA
Sbjct: 219 SSPLLLSLQHILVTYEIKSDPYMLELLQKQQDGDEVRKQLEKLFVSRKTYCYEQIRT-LA 277
Query: 305 LKAAETISCYESDFFAW----------EQLDGFGETIIKKFGSDASQALVTYVPSGA--E 352
KA + + W E +D + + Q L+ + S
Sbjct: 278 SKAFDMTHEFGVSAMEWYLQQSMGQLREVVDMTSHQQLFDTAAREKQHLMRILESLPLPR 337
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVE-RVITAIVLQSLLSEL 410
+IG ++ L+ K+ LI+ L+ E D ++FVE RV A L+++
Sbjct: 338 DTIGS----SISPSKLSHKVEMLIDLLVSELMENPDFFGLVFVEQRVFVAA-----LAQI 388
Query: 411 LPRHCTWKTKYIAGNNSGIQCQSRKKQNEI------------VEEFRRGLVNVIVATSIL 458
L H ++ + G G + QS K++ I +++FR G N+++ATS+L
Sbjct: 389 LATHPQTQSLFRVGTFVG-ESQSPKRKTNIANLAESRNQGATLDDFRAGRTNLMLATSVL 447
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL--- 515
EEG+D+ SCNLV+ F+ + + SF+Q RGRAR Q S Y + G + S L
Sbjct: 448 EEGIDISSCNLVVDFERPKNLKSFVQRRGRARKQRSKYFIFTPQGPGSRSSEYWQSLEAD 507
Query: 516 ---ASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLP 572
A +++R +++ + G +F ++STG + TL ++ +Y +C+
Sbjct: 508 MRRAYEDELRIVKMANEREKVEEEED---GREF-RIQSTGALLTLDNACQHLYHFCAVSA 563
Query: 573 SDGYFKPTPKFHINKEMG---ICTLYLPNNCPIQTVIAQGNIKTL------KQAACLEAC 623
+ + P+F + I + LP C +V ++K+ ++ A EA
Sbjct: 564 TGSFVDSRPQFKFTDVLTGQIISEVLLP-ICIDPSVRKANSLKSWRTEKMARKDAAFEAY 622
Query: 624 KKLHQIGALTDNLLP 638
L++ G + DNLLP
Sbjct: 623 TALYRAGLVNDNLLP 637
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 188/422 (44%), Gaps = 55/422 (13%)
Query: 913 QKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDH-CM 971
Q P++ + LP C + P S F PSI+H+ + L+A L+ LL
Sbjct: 861 QAIPNQKAEPLPISDCMVDNLPAQYSIFA--LLFPSILHKFECDLIADQLRTSLLSPVAF 918
Query: 972 QNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKK 1031
Q + +P + ++A+T+ E + LE GD LK+ +S L E L+ KK
Sbjct: 919 QLLDLPLL--VKALTSSSTGEVEDYQQLEFYGDCILKFISSLHLMAANPKEPESFLTQKK 976
Query: 1032 ERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG- 1090
I+SN +L + L ++ T+ F W + VT
Sbjct: 977 GNIVSNGSLTRASLSAGLDRYVITKRFTGAKW--------------QPRLLVETVTVTSP 1022
Query: 1091 --RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR----QFQVH 1144
+ K+ SK +ADVVE++IGA GG + + +++++P F
Sbjct: 1023 PNKVKLSSKLIADVVESIIGASFVVGGFPKAFACIQTLLPLENWISIPDANNILYDFAQE 1082
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
+ LE L+ ++F LL++A+TH SY+ P + YQR EFLGDAVLD++IT
Sbjct: 1083 GPTFTGLSTLERLIGHTFSKKFLLLDAITHASYLGPNVHCDYQRTEFLGDAVLDFIITKR 1142
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA--------SHELYK---- 1252
LY P L + +R+A VN A + + +H+ + S L++
Sbjct: 1143 LYAHTPPLEHQTMHAIRTAMVNASFLAFRMFETTIDEHLTNKATLQTDVQSRALWQFLRS 1202
Query: 1253 ---RINITVD-SFEK-----------LSLGSTFGWE--SVTSFPKALGDIIESLAGAIFV 1295
++N + +F++ L + + W ++T PK L DI+ES+ GAI++
Sbjct: 1203 GAPQVNAAREIAFKQHQEARGQILVALERDARYPWHLLALTDPPKFLSDIVESVLGAIYI 1262
Query: 1296 DS 1297
DS
Sbjct: 1263 DS 1264
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
L S + + D LLV+ALT S E YQ+LEF GD +L ++ +++L P
Sbjct: 912 LLSPVAFQLLDLPLLVKALTSSSTGEVE---DYQQLEFYGDCILKFISSLHLMAANPKEP 968
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
+LT + V+N +S+ GL +++ + KR T ++ L T
Sbjct: 969 ESFLTQKKGNIVSNGSLTRASLSAGLDRYV------ITKR--FTGAKWQPRLLVETV--- 1017
Query: 1274 SVTSFP-------KALGDIIESLAGAIFVDSGCNREVV-FQSIRPL 1311
+VTS P K + D++ES+ GA FV G + Q++ PL
Sbjct: 1018 TVTSPPNKVKLSSKLIADVVESIIGASFVVGGFPKAFACIQTLLPL 1063
>gi|444518375|gb|ELV12129.1| Endoribonuclease Dicer [Tupaia chinensis]
Length = 974
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 28/260 (10%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+ E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY
Sbjct: 720 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 779
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L
Sbjct: 780 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQ 835
Query: 1271 GWES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
G +S PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I
Sbjct: 836 GMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIE 895
Query: 1318 PETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADK 1374
+ PVREL E + FS P GK VTVEV G+ +
Sbjct: 896 KFSANVPRSPVRELLEMEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSY 949
Query: 1375 KTAKKVACKEVLKSLRASFP 1394
+ AK A + L+SL+A+ P
Sbjct: 950 RIAKSAAARRALRSLKANQP 969
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 348 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 407
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 408 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 441
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 26 QLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR 64
++E LE AL NTIV L TGSGKT IA++L + +Y +R
Sbjct: 30 EVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIR 68
Score = 41.6 bits (96), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD+ L + IT YL+ YP G L+ MRS V+N
Sbjct: 364 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 404
>gi|281339672|gb|EFB15256.1| hypothetical protein PANDA_009266 [Ailuropoda melanoleuca]
Length = 1917
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 165/364 (45%), Gaps = 70/364 (19%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVPYQRQFQVH 1144
+ K++AD VEAL+G +L++ GE +FL +G+KV + P + F
Sbjct: 1556 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQ 1615
Query: 1145 AERLVNVR----------------------------------------------HLESLL 1158
+ L R + E +
Sbjct: 1616 QKNLSGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1675
Query: 1159 NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY SPG LT
Sbjct: 1676 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1735
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILH-----ASHELYKRINITVDSFEKLSLGSTFGWE 1273
D+RSA VNN +A + + + H +L K +DS + S E
Sbjct: 1736 DLRSALVNNTIFASLAYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK-E 1794
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTE 1331
PKA+GDI ESLAGAI++DSG + E+V+Q P++ P+I + PVREL E
Sbjct: 1795 EDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLE 1854
Query: 1332 Y-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ FS P GK VTVEV G+ + + AK A + L+SL+
Sbjct: 1855 MEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLK 1908
Query: 1391 ASFP 1394
A+ P
Sbjct: 1909 ANQP 1912
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + +Y +R S
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRSG 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E KH+VLVMT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKEKWSQEFMKHQVLVMTC 152
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L+ L+ Y L+ I +L+ DECH A H Y IM +L E S PRI G+T
Sbjct: 153 YVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCENCPS-CPRILGLT 206
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
AS + K E + +KI LE ++ S T VL +
Sbjct: 207 ASILNGKCDPEELE--EKIQKLEKILKSNAETATDLVVLDRY 246
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 391 IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR--------KKQNE 439
IIFVER TA+VL L+ E P + +I G+ G + Q R +KQ E
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
++ +FR N+++ATSI+EEG+D+ CNLV+ FD S++QS+GRAR S+Y+++
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 500 VKSGD-STTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY-----HVESTGT 553
+ + + L+ Y A +R + + + +D + + G
Sbjct: 564 ADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEPDIEPVVDDDDVFPPYVLRPDDGGP 623
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG----ICTLYLPNNCPIQTVIA-- 607
T+++++ I YC+RLPSD + PK +E+ TLYLP N P++ I
Sbjct: 624 RVTINTAIGHINRYCARLPSDPFTHLAPKCR-TRELPDGTFYSTLYLPINSPLRASIVGP 682
Query: 608 -QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
++ ++ L C+KLH+IG L D+L+P
Sbjct: 683 PMSCVRLAERVVALICCEKLHKIGELDDHLMP 714
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + F+LE LE LGDSFLK+A + LF TY + HEG LS + + +SN L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358
Query: 1041 CKLGCEQKLPGFIRTESFDPKM-WIIPGDNSGSYELNDD 1078
+LG ++ LP + FDP + W+ PG Y +N D
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPG-----YVVNQD 1392
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1164 DPSLLVEALT----HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+P L+++ALT + L +RLE LGD+ L + IT YL+ YP G L+
Sbjct: 1295 NPGLILQALTLSNASDGFNL-------ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSY 1347
Query: 1220 MRSASVNN 1227
MRS V+N
Sbjct: 1348 MRSKKVSN 1355
>gi|339242189|ref|XP_003377020.1| putative ribosomal protein S7e [Trichinella spiralis]
gi|316974223|gb|EFV57735.1| putative ribosomal protein S7e [Trichinella spiralis]
Length = 2029
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 207/457 (45%), Gaps = 78/457 (17%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
VL A+T +K Q+ F LES+E LGDSFLK+ S +F N +EG L+ + I+SN L
Sbjct: 1543 VLRALTLRKAQDMFDLESMEALGDSFLKFIVSLHVFIKETNWNEGRLTSLRSEIVSNTNL 1602
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIPGDNS-----GSYELNDDSLFNGRK--------- 1085
LG ++ L + FDP W+ P S YE ++ + G
Sbjct: 1603 FNLGKQKLLQAKLTAVPFDPTAQWLPPCFRSLAALESGYESVNELIDEGDSKKKNEALKA 1662
Query: 1086 -----IYVTGRKKVKS----------KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
+ V R ++ S K++AD VEAL+G +L G + L GI +
Sbjct: 1663 NTPTPVVVAERYEMCSLNRTHQVIYDKSIADCVEALVGCYLLEAGMRPAIKLLKWFGIDI 1722
Query: 1131 D--FVN---------------------VPYQRQFQVHA-ERLVNVRHLESLLNYSFRDPS 1166
D +N V + ++H+ ++ E+ + Y F + +
Sbjct: 1723 DGNLMNLLSSSSSSSSSSSTAFCSENCVLIGPEAKIHSIWTAYDLNSFEAKIGYRFTNKA 1782
Query: 1167 LLVEALTHGSYMLPEIP--RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
L++ALTH SY E P Y+RLEFLGDA+LDYLI+ +LY+ SPG L+D+R+A
Sbjct: 1783 YLIQALTHSSYNEVETPVTDSYERLEFLGDAILDYLISRHLYSSKRIRSPGLLSDLRAAL 1842
Query: 1225 VNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF-----EKLSLGSTFGWESVTSFP 1279
VNN ++ +++ + A L + +N + + + T + P
Sbjct: 1843 VNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQDDDEKETSEFAEHVEVP 1902
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF------------HPVR 1327
K LGDI ES+AGAIF+DS C+ V+Q ++ I + F PVR
Sbjct: 1903 KPLGDIFESVAGAIFLDSHCSLATVWQVYYNMIAEEIGKQRSDFTSFNKCLCHPPISPVR 1962
Query: 1328 ELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGR 1363
L E ++ F+ + R G + V V+V G+
Sbjct: 1963 HLLELEPERVQFN----ILDREEGNSGVHVQVVVTGK 1995
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 7/218 (3%)
Query: 4 VSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLL 63
V + + E+ + L R YQ E LE A K+N IV L TG+GKT IA+ML+R + +
Sbjct: 320 VEHKVNRMEKEQSGRLENVRLYQKELLECAKKENVIVTLGTGTGKTFIAVMLIREMSESV 379
Query: 64 RKP---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
+P ++F+V KV LV QQAE I+++T+LKVG++ G +GVD W W E K
Sbjct: 380 HQPLKEGGKRSLFIVDKVPLVKQQAEHIRINTNLKVGEFHGALGVDCWSAKIWMEFFDKF 439
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
VLVMT +I + L + K +++ +++ DECHHA +H Y IM E Y DS +
Sbjct: 440 HVLVMTAEIFRNILTHGFIKFDIVNLIVFDECHHATKQHPYKKIM-ELYKLCYNNNDSGI 498
Query: 181 -PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKV 217
PRI G+TAS + K E + I +LET + S+V
Sbjct: 499 QPRILGLTASVMNKK--GDEIGLQKAIRNLETTLCSRV 534
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 151/648 (23%), Positives = 277/648 (42%), Gaps = 119/648 (18%)
Query: 402 VLQSLLSELLPRHCTW-KTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSIL 458
+L +L PR ++ + Y+ G+ + S +Q E+++ FR G +N++ ATSIL
Sbjct: 753 ILIDTAKKLQPRSYSYLEVDYVVGSRMSAEVAEPSFARQEEVLKNFRHGKLNLLAATSIL 812
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK----------------- 501
EEG+DV+ CN VI FD T SF+QS+GRAR + + Y ++V+
Sbjct: 813 EEGIDVRHCNYVIRFDTPLTFRSFVQSKGRARQKIAYYTILVQDRFLESFQEMLNSFVET 872
Query: 502 ------SGD-----STTQSRLENYLASGNKM---RKEVLSHASLPCSPLNNHMYGEDFY- 546
+G + T+ R +Y + +++ RKEV +LP +++ + E +Y
Sbjct: 873 EKFLKVNGRDLNILTRTKDRDRSYSGNNDQVDNCRKEV----NLPNGDVDSLV--EPYYT 926
Query: 547 HVESTGTIA-----TLSSSVSLIYFYCSRLPSDGYFKPTPKFHI----NKEMGI---CTL 594
+ E G + LSS+ ++I YC++L D + +PKF + NK++ I T+
Sbjct: 927 YFEENGLVKKAACLVLSSAHNVIKRYCNKLRKDRFADSSPKFSVQTILNKDLSISYVATV 986
Query: 595 YLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRG 651
LP P++ I N K + AA E K LH +G L + L+P + V K K
Sbjct: 987 QLPTTSPLKKKIEGKPMQNAKLAEMAAAFETAKMLHAMGELNEFLIPPVTVRKEIELKED 1046
Query: 652 NEPYNAEHPIYF----PPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTEL 707
+ ++ Y+ P L P+ + +Y Y I + S + + + +
Sbjct: 1047 EQFFSISSRSYYLKEVPDALYKAIPRADQKSY-LYAISIS-------SIESFLPRLGILV 1098
Query: 708 ESEIKKV-NFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNE 766
I + F + + + V ++ + +Q+ + F +F+ + +
Sbjct: 1099 SKPIGNLPGFSVFTDESYIDVEIEFVEETSYSAHQLDILTSFHCCIFKNYLFREEEDF-- 1156
Query: 767 ILDGFELRDNLEIDYLLLP--------------STGQLIDW-KTVATVLFPRDNGSKHNM 811
I D +N YL++P + ++I+W K V+ + P+ K M
Sbjct: 1157 IFDP----ENAACSYLIVPLKCEYNSKCSVDLSTAEKIINWSKDVSHI--PQQRSEKFIM 1210
Query: 812 NCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVT 871
N S+ FNA + P K Y +T V S F
Sbjct: 1211 NSSSYFNAVVY-----PWYKNKNDRDFY--------YFVTAVDNTCTPMSPFPLK--MYR 1255
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRI-FHVQNYLSKCRQ-------QKQKEPSKISFEL 923
++ +++E +++ +PLL+ + + F N L C + + + +L
Sbjct: 1256 SFAEYFEVTKQVKVLDKNQPLLSVKMVSFKRLNLL--CEKPISILLFDFDDDANSCHCKL 1313
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCM 971
PEL +I+ P+ S + F+P++++R+ LL+A L+ +L M
Sbjct: 1314 VPEL--VIIHPMPASMWRCLIFLPTVLYRMNHLLIAEQLRLQILREAM 1359
>gi|322704697|gb|EFY96289.1| Dicer-like protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1476
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 183/386 (47%), Gaps = 46/386 (11%)
Query: 981 VLEAITTKKCQEDFHL------ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERI 1034
LEA+T K +ED + E LE LGD+FLK A + LF N +E V++ +
Sbjct: 1020 ALEALT--KGEEDVDVQTSKNYERLEFLGDAFLKMATTISLFTLIPNRNEFEYHVERMIL 1077
Query: 1035 ISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG-RKK 1093
I N L ++ L ++R+ FD + W D L G+K G ++
Sbjct: 1078 ICNKNLFNHAVDRGLQEYVRSRGFDRRSW-----------YPDLVLRKGKKHKPVGLTQR 1126
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFL----------DRIGIKVDFVNVPYQRQFQV 1143
+ K++ADV EALIGA T E + L R+ D+ Q +Q
Sbjct: 1127 LADKSIADVCEALIGAAYMTEPEGMDLAVKAVTVMVQSKNHRMKKYSDYYEKYVQPAWQT 1186
Query: 1144 HAER---LVNVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDY 1199
R L+ V +++ + Y+FR P LL A H SY PE+P YQRLEFLGDA+LD
Sbjct: 1187 IPSRPIELLAVGKVKASIGYNFRSPKLLRSAFKHPSYPYEPELPN-YQRLEFLGDALLDV 1245
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
I +L+ +YP P +LT+ + A +N ++ V+ GLH+HIL + I V+
Sbjct: 1246 AIVDFLFQRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSIMGHIAGFVE 1305
Query: 1260 SFEKLSLGSTFG------WESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIR 1309
EK + G W + PKAL DI+E++ GA++ DS + R + I
Sbjct: 1306 QIEKAKSQTEDGVLQLDFWLNTEHPPKALSDILEAVVGAMYEDSKYDYNSVRNFFTKFIA 1365
Query: 1310 PLLEPMITPETMR-FHPVRELTEYCQ 1334
P + M +T HPV +LT+ Q
Sbjct: 1366 PYFQDMTLYDTYAGGHPVTQLTKLMQ 1391
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 116/210 (55%), Gaps = 15/210 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL---LRKPSPFVAVFLVPKVV 79
R YQ++ E A +QNTI+ L+TGSGKT IA++LLR L ++ + A FLV KV
Sbjct: 123 RQYQIDLFERAKEQNTIIVLDTGSGKTYIAVLLLRHVLALELETQQQTKRTAFFLVDKVA 182
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQ ++ + + VGK +GD W E+ ++ V+V T QILLD L
Sbjct: 183 LCLQQHRFLQANLEYPVGKLYGDKA----SMREWASEIQENMVIVCTAQILLDLLSSGLV 238
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+N I +L+ DE HH + H YA IM + Y R+ ++ PRI MTASP+ SK
Sbjct: 239 TMNQINLLVFDEAHHTKKNHPYATIMRDHYIRM----KAHHPRILAMTASPVDSKT---- 290
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNF 229
+D++ DLE + SK+ T + E +L+
Sbjct: 291 RDFYAAALDLEATLCSKIATVSEEVLLAGM 320
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 27/311 (8%)
Query: 382 YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN---NSGIQCQSRKKQN 438
+ + RCI+FV++ A +L + R ++ G+ +S I S K Q
Sbjct: 463 FESQQSTRCIVFVQKRYIAFLLSEAFNRSALRIQDMTAGFVVGSQPASSSIVNMSIKDQI 522
Query: 439 EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLL 498
E + FR G +N I AT + EEG+D+ C+L+I FD + +IQS+GRAR NS Y+
Sbjct: 523 ESLNRFRYGEINCIFATQVAEEGIDIPECDLIIRFDLYDSAIQYIQSKGRARQTNSVYVN 582
Query: 499 MVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS------PLNNHMYG-----EDFYH 547
MV+ + + +L + +R+ +SLP +N+ + G + +
Sbjct: 583 MVERDNIQHRRKLIQATRDVHALRRFC---SSLPSDRKINDVEINDGLLGLQAKSQISFE 639
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI-NKEMGICT--LYLPNNCPIQT 604
V TG T SS ++ + S + G P++ + + EMG T + LP++CP+++
Sbjct: 640 VPQTGARLTFDSSRGVLAKFVSSVC--GGADAHPEYIVTSTEMGKFTAIVLLPDSCPVKS 697
Query: 605 VIAQGNIKTL--KQAACLEACKKLHQIGALTDNL---LPDIVVEKHDAQKRGNEPYNAEH 659
L + +A +AC +L + N L ++ + +A+ +E +E+
Sbjct: 698 FSGTPQRSKLLARGSAAFKACIELLNYKYIDGNFRSTLTRLLPKMRNARLALSEKKQSEY 757
Query: 660 PIYFPPELVNQ 670
+ PEL Q
Sbjct: 758 GMKSKPELWAQ 768
>gi|405960420|gb|EKC26346.1| Endoribonuclease Dicer [Crassostrea gigas]
Length = 1759
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 155/305 (50%), Gaps = 42/305 (13%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVR- 1152
+ K++AD VE+LIG +L++ G+ L F+ +G+KV +P +++ V L++++
Sbjct: 1428 IPDKSIADCVESLIGCYLTSCGKKAALKFMHWLGLKV----LPQKKKGMVQDTELLSLQC 1483
Query: 1153 ------------------------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQR 1188
LE + Y FRD S L++A TH SY + CYQR
Sbjct: 1484 PDSPLLVHVPDHNSILHRLLEGYDTLEQKIGYEFRDKSYLLQAFTHASYHYNTVTDCYQR 1543
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LEFLGDA+LDY+IT +LY SPG LTD+RSA VNN+ +A +VK HK+ S
Sbjct: 1544 LEFLGDAILDYVITRHLYEDSCKYSPGVLTDLRSALVNNNIFAALAVKWDFHKYFKAISP 1603
Query: 1249 ELYKRINITV----DSFEKLSLGS-----TFGWESVTSFPKALGDIIESLAGAIFVDSGC 1299
L+ I V + +++ L PKALGDI ESLAGAI++DS
Sbjct: 1604 PLFGVIEKFVARQKEREDEIDLSDDEGEGEEEEHVELEVPKALGDIFESLAGAIYLDSKM 1663
Query: 1300 NREVVFQSIRPLLEPMITPETMRF--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVE 1357
+ + V++ +++P I + PVREL E + +KP + + GK VTV
Sbjct: 1664 SLDTVWRVYYRIMKPQIDKYLLSIPKSPVRELLEM-EPETAKFEKPERT-LEGKIRVTVN 1721
Query: 1358 VQANG 1362
V G
Sbjct: 1722 VVTKG 1726
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 161/667 (24%), Positives = 281/667 (42%), Gaps = 133/667 (19%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTW-------KTKYIAGN---NSGIQCQSRKKQNEI 440
I+FVE A+ + L E+ C+W K++++ G + + + KKQ ++
Sbjct: 469 IVFVEHRYVALAINKFLEEV----CSWDENLCFVKSQHLTGQGLKDGKSKKGNWKKQEDV 524
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ +FR +N++V+T++LE+G+DV CNL++ FDP R+ S+ QS+GRAR ++S+YL++V
Sbjct: 525 LRKFRLQDLNLLVSTTVLEDGIDVPKCNLIVKFDPPRSYKSYSQSKGRARARDSEYLILV 584
Query: 501 KSGDSTTQSRLENYLASGNKMR--KEVLSHASLPCSPLNNHMYGEDFYHV--------ES 550
+ +++ E ++ N + ++VL + ED V ++
Sbjct: 585 E------ENKKEMFMQDYNVFKGIEDVLVDRRNEEEDEEEDNHCEDTSKVLLPYMPSSDN 638
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGI---CTLYLPNNCPIQT 604
T+ ++++ + YC++LPSD + TPK I+ E G TL LP N P +
Sbjct: 639 PHICVTVETAIAFVNRYCAKLPSDAFTHLTPKCTLQEISGEGGTMYRATLNLPINSPYKR 698
Query: 605 VIAQGNI---KTL-KQAACLEACKKLHQIGALTDNLLP-------------------DIV 641
+ QG + K L K+A L+ C+ LH+ G L D L P
Sbjct: 699 SV-QGEVMPTKNLAKRAVALKLCQCLHEAGELDDQLNPVGKEVFTVEEEQEEEDAADGEE 757
Query: 642 VEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISARNIVL 701
E + + R P + Y+ L Q T C L Y+IS + +
Sbjct: 758 GEDYSGEGR---PGTTKRKQYYFKRLAASLVQSHPSTEECLL--------YNISLQ-LSK 805
Query: 702 AMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNL 761
A+ E + +K+ + RG + K RI +P + R ++T ++ N
Sbjct: 806 AISDEQNTRGRKICAPEDTPRGFGILTSK---RIPQVPTFPVYTRSGEVTASIDVLSSNF 862
Query: 762 DKLNEIL-------------------DGFEL-RDNLEIDYLLLP----STGQLI-DWKTV 796
+E L D E D ++ YL++P G ++ DW +
Sbjct: 863 SVSSEELRRLRDFHRFTFTNVLRLEKDPMEFCPDESDLGYLIVPLNKDDDGNVVLDWTFI 922
Query: 797 ATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNG----QIYCITG 852
V D+ S N + V +K + +++V + Q + +
Sbjct: 923 KEV---EDSKSHVRRNIHDSKREQFVFSKE------EYEDAVVMPSYRNVDQPQHFYVAE 973
Query: 853 VLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQK 912
+ LN +S F + T+ +Y +YG+ + +PLL+ N L+ R
Sbjct: 974 IRSDLNPSSPFP-SPELYKTFSAYYTTKYGLTITNLEQPLLDVDHTSARLNLLTP-RYMN 1031
Query: 913 QK---------EPSKISFE-------LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
QK E K E L PELC I + P SL + +P+I++RL L
Sbjct: 1032 QKGVALPTSSAETKKARRENLQQKQILVPELCEIHVFPASL--WRKAVCLPTILYRLNYL 1089
Query: 957 LLAVNLK 963
L+A ++
Sbjct: 1090 LVADEIR 1096
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
+N Q+E L+ AL++NTIV L T G T I++MLL+ ++ LRK +V +
Sbjct: 32 QNLQVELLDAALQRNTIVCLGTSGGNTFISVMLLKEFSTELRKQLQCGGKRSVVCLNSDE 91
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+ + ++ IK H+DL V + D + ++ H++LV P + D L +
Sbjct: 92 SIQEISQVIKHHSDLNVMPVYELSE----DESKLNSMLNDHQILVTKPSVFNDILLKKFL 147
Query: 140 KLNMIKVLILDECHHA-RGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
I ++IL+ CH +H Y I+ ++ + + + RI G+T+S I K
Sbjct: 148 LPVQINLVILENCHLILHEEHPYQSIINIIHNSVRKEAAA---RILGLTSSFISQKC--- 201
Query: 199 EQDYWQKIHDLETLMN 214
QD + H + +L N
Sbjct: 202 -QDPGELEHIIRSLEN 216
>gi|195443910|ref|XP_002069632.1| GK11626 [Drosophila willistoni]
gi|194165717|gb|EDW80618.1| GK11626 [Drosophila willistoni]
Length = 2281
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 167/364 (45%), Gaps = 82/364 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ------------- 1140
+ K++AD VEALIGA+L G L+F+ +GI+V +PY +Q
Sbjct: 1924 IPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRV----LPYTKQTANTLPEIESNEQ 1979
Query: 1141 ------------------------------FQVHAER-----LVNVRHLESLLNYSFRDP 1165
F +A L E++L Y FRD
Sbjct: 1980 QRIPGSTKPDSKNTTVVYGKWPTPRSPLLPFAPNASDELEHLLSGFEEFEAILGYRFRDR 2039
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 2040 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2099
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF--------------- 1270
NN +A +V+HG HK H S L N +D F ++ +
Sbjct: 2100 NNTIFASLAVRHGFHKFFRHLSPGL----NDVIDRFVRIQQENGHCISEEYYLLSEEECD 2155
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRE 1328
E V PKALGD+ ES+AGAIF+DS + +VV+ +++P I ++ P+RE
Sbjct: 2156 DAEDV-EVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMKPEIEQFSNSVPKSPIRE 2214
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVL 1386
L E + KP + VTV+V G TF + + + AK A K L
Sbjct: 2215 LLEL-EPETAKFGKPEKLADGRRVRVTVDVFCKG-----TFRGIGRNYRIAKCTAAKCAL 2268
Query: 1387 KSLR 1390
+ L+
Sbjct: 2269 RQLK 2272
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELLPR-------HCTWKTKYIAGNNSGIQCQS--RKK 436
D C +I+ + TA VL LL+E+ R C + T +A + + ++
Sbjct: 501 DTLCGLIYCNQNHTARVLFELLAEMSRRDADLKFLRCQYTTDRVADPATEPKEAELEHRR 560
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q E+++ FR N+++ATS+LEEG+DV CNLV+ +DP T S++Q +GRAR + +
Sbjct: 561 QEEVLKRFRMHDCNLLIATSVLEEGIDVPKCNLVLRWDPPTTYRSYVQCKGRARAAPAYH 620
Query: 497 LLMVK-----SGDSTTQSRLEN--YLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
+++V + + + R E+ Y+ N KE + S L N + + +
Sbjct: 621 VMLVAPSYVPAEAKSVELRAESHRYICGANGDNKEDDMDSDSDDSALPNSLGSDPYTFGT 680
Query: 550 STGTIATLSSSV 561
+ GT+ L+ V
Sbjct: 681 ARGTVKILNPEV 692
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + ++
Sbjct: 1748 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1806
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L ++ F+P W+ P
Sbjct: 1807 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPP 1837
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L A ++NTI+ L S K IA+ LL+ + R+ V+V+L +V
Sbjct: 17 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRSSRRKGK-VSVYLSCQVGSDT 75
Query: 83 QQAEAIKM--H-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
M H TDLKV + DM V F W + + V ++ P+ L+ L L
Sbjct: 76 NATSMCTMLTHLTDLKVWQEQPDMQVPF--DHCW----TDYHVSILRPEGFLELLELGQL 129
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
LN + ++++++CH Y+ ++ F + + + PRI G+ A P+ S
Sbjct: 130 ALNRVGLIVMEDCHDG---SVYSKLVPIFKNHICRAPAGDRPRILGL-AGPLHS 179
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH-INKEMGICTLY-----LPNNCPIQT 604
TG L ++++L+ YC+RLPSD + K T + + E TLY LP N P++
Sbjct: 826 TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCASTERNGITLYQYTIRLPINSPLKH 885
Query: 605 VIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
I + T ++ A L+ C +LH+IG L D L P
Sbjct: 886 DIVGLPMPTQTLARRLAALQTCVELHKIGELDDELQP 922
Score = 40.4 bits (93), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L+ + PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1740 LVGHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYITYENVHEGK 1796
Query: 1217 LTDMRSASVNN 1227
L+ +RS V N
Sbjct: 1797 LSHLRSKQVAN 1807
>gi|242809985|ref|XP_002485488.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218716113|gb|EED15535.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1420
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 220/527 (41%), Gaps = 72/527 (13%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPP-ELCRIIMAPISLSTFYSFTFVPS 948
EP G + ++L + Q +Q + S +L P LC I P S F F+PS
Sbjct: 873 EPHFKGTTLPKRTDFLHQIAQSEQLPLAHTSQQLEPVRLCHIDRLPAKFSKFA--LFIPS 930
Query: 949 IMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
I H+++ L +A L +L +N++ VL AI+ QE+ + E LGDS L
Sbjct: 931 ITHKIEVLFIAERLARTVLSRVKFENLS----HVLTAISASSAQEEHDYQRYEFLGDSLL 986
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K S L HEGLLS +K+ I+SN L + + L FI T+SF + W
Sbjct: 987 KLITSIHLVVKKPLWHEGLLSAEKDTIVSNGRLHRTALDLGLDKFILTKSFTGRKW---- 1042
Query: 1068 DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG----ENVGLIFL 1123
N S F + ++++ +KT+ADVVEAL+GA GG E+ IFL
Sbjct: 1043 ------RPNYISQF---ETVTEEKRQMSTKTLADVVEALLGAAFLDGGYEKLESCAKIFL 1093
Query: 1124 DR---IGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 1180
I D + A + +E +L Y F PS+L EALTH
Sbjct: 1094 PEQTWTSISDDMRTLYEVALVSNQASSHPKLGQMEEILGYKFNKPSILFEALTHPCAN-- 1151
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN-------------- 1226
+ YQRLEFLGD++LD+ + +N +S + MR+A VN
Sbjct: 1152 DGAPTYQRLEFLGDSLLDHFVVQEFFNHPEKISHQDMHLMRTAVVNAHFLGFLCQSLYIT 1211
Query: 1227 --------------------NDCYALSSVKHGLHKHILHASHELYKRINITVDSF-EKLS 1265
+ Y ++HG I +A E R + + L
Sbjct: 1212 EERSEPVSPGKAHISTISTEHKIYLWQLMRHGASWEITNAQQETKARYEAWGPAVHDALM 1271
Query: 1266 LGSTFGWESV--TSFPKALGDIIESLAGAIFVDSGCNREVVFQ-----SIRPLLEPMITP 1318
+ + W + + K D++ESL GAIFVDS + + Q S+ P L +I
Sbjct: 1272 HSNKYPWADLFRINASKFFSDMVESLLGAIFVDSKGSLDASRQFLERISLLPCLRRIIRE 1331
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLF 1365
E + HP +L E + + V R+ V+ +G +F
Sbjct: 1332 EVLILHPFNQLHEAAISDKVQISHSVEKRLPTSPGFEDVVREDGLVF 1378
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 389 RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSR-------KKQNEIV 441
R I+F E+ T I+L LLS + P TKY GN++ +S +Q +++
Sbjct: 394 RVIVFAEQRATVIMLAHLLS-VHPLTKGIVTKYFLGNSNYANRKSNITELSTLVEQKDVL 452
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
E R G NV++AT++LEEG+DV +CN+VI FDP + + SFIQ RGRAR + S +L +
Sbjct: 453 TELRVGKTNVLIATNVLEEGIDVPACNIVICFDPPKDLRSFIQRRGRARDRQSRLVLFID 512
Query: 502 SGDS-------TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTI 554
D + + +L+ A + KE+ + + + V ST +
Sbjct: 513 GNDDDGLAKWESMEEKLKEIYADNMRELKEIKALEDI-------EEESTEILKVPSTEAV 565
Query: 555 ATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKE---MGI----CTLYLPN--NCPIQTV 605
++ + +C+ + S + P++ I ++ +G + LP+ + ++
Sbjct: 566 LNHQNAQPFLAHFCATV-SYAHTTNQPEYIIERQEVSLGFTQITAKVVLPSYIDPSLRVA 624
Query: 606 IAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
++ +T K A A +A L+ G + DNL+P
Sbjct: 625 FSKSKWRTEKAAKRDAAFQAYIALYDAGMVDDNLMP 660
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 9 DTTEEVSADTLPF---ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
D +E +SA P R YQ E L +L+QNTIV +ETGSGKT IA+ LR L R
Sbjct: 8 DGSEPLSAMDKPNNIKPRAYQQEMLAESLRQNTIVAMETGSGKTQIAV--LRIQEELSRC 65
Query: 66 PSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGK-YWGDMGVDFWDGAT-WKEEMSKHEVL 123
+ FL P V L QQ I + + G VD W W + + ++
Sbjct: 66 SPKKLVWFLTPTVALAEQQYTVISKQLPIYQSRLLLGSDNVDHWSTQQIWDKILLNIRIV 125
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI 183
V TPQ+LLD + + KL+ + +L+ DE H + IM YH ++G LP I
Sbjct: 126 VSTPQVLLDAMCHGFVKLSGLSLLVFDEAHRCVKASPFNGIM-RLYHHARKSGLDELPAI 184
Query: 184 FGM 186
G+
Sbjct: 185 LGL 187
>gi|425768112|gb|EKV06652.1| Dicer-like protein 2 [Penicillium digitatum Pd1]
gi|425769791|gb|EKV08273.1| Dicer-like protein 2 [Penicillium digitatum PHI26]
Length = 796
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 192/448 (42%), Gaps = 59/448 (13%)
Query: 896 RRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
RR +Q + + + K S+ LP C I P F F+ +I+ RL++
Sbjct: 269 RRRNLLQKRALNVAEDGEADAPKKSYVLPAVACVIDKLPAKQGLFG--LFISAILDRLEA 326
Query: 956 LLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQ 1014
L+A L + +L +QN+ V+ AI+ Q + + E GDS LK+ S Q
Sbjct: 327 SLVAHRLNDTILKGVGIQNID----HVITAISAPIAQASTNYQRFEFFGDSVLKFTVSCQ 382
Query: 1015 LFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYE 1074
LF N HEG LS +++++ N L + + FI T F P+ W P
Sbjct: 383 LFFRNTNWHEGYLSESRDKLVQNTRLAHAALDIGIDCFILTSRFTPRKWAAP-------- 434
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN 1134
L + T ++ + +K +ADVVE+LIGA GG L R ++D
Sbjct: 435 -----LIRNKLEASTAKRSISTKVLADVVESLIGAAYVDGGIRKAQACLHRFLPEIDLFT 489
Query: 1135 V---PYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEF 1191
P A L+N L L+ Y+F+DP+LL EALTH S + YQRLEF
Sbjct: 490 TEISPLTLPPSKGASSLINHHRLAGLIGYTFKDPALLTEALTHASCEYDTSTQSYQRLEF 549
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA-------------------- 1231
LGDAVLD ++ + + G +T ++ + VN + A
Sbjct: 550 LGDAVLDMVVMAVIAAHPVEMDQGPMTLLKHSVVNANLLAFFCMELCAPDEPTHVPQFAN 609
Query: 1232 --LSSVKHGLHKHILH--ASHE----------LYKRINITVDSFEKLSLGSTFGWESVTS 1277
++ V H H+ SH L + + + + L GS + WE
Sbjct: 610 GEINFVPHQGQIHLWRFLRSHGPNVKSAREACLERHHGLRDEIRDALEHGSQYPWELFAR 669
Query: 1278 F--PKALGDIIESLAGAIFVDSGCNREV 1303
K L DI+ES+ GAIF+D G N +V
Sbjct: 670 LRADKFLSDIVESVLGAIFIDCGGNLDV 697
>gi|328773741|gb|EGF83778.1| hypothetical protein BATDEDRAFT_85615 [Batrachochytrium dendrobatidis
JAM81]
Length = 1746
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 144/550 (26%), Positives = 230/550 (41%), Gaps = 70/550 (12%)
Query: 838 LVCTPHNGQIYCITGVLGHLNANSLFTRNNGS---VTTYKKHYEERYGIQLCFDREPLLN 894
+V TPHN Y I + NA S T G +TTY+ G + LL
Sbjct: 1153 IVYTPHNNIKYQIKCWSENCNAYSELTIGKGKGQHITTYQA-IASSQGYTVDHPNANLLK 1211
Query: 895 GRRIFHVQNYLSKCRQQKQK----EPSKISFELP---PELCRIIMAPISLSTFYSFTFVP 947
RI H+++Y C+ K K + ++ LP P+ R+ +PIS ++P
Sbjct: 1212 CVRIPHIKDYRRSCQATKNKHNCVDDNQNLDNLPQLVPDAFRV--SPISAKLTMVAHYLP 1269
Query: 948 SIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
SI++ L + LA + Q IP ++ A TT + E LETLGD L
Sbjct: 1270 SILYSLHTACLAAEFDQKYGLYPKQ---IPLSTLMSAFTTPAANSITNYERLETLGDKVL 1326
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ + L +YQ+ G LS ++SN L ++ + L G + T F W P
Sbjct: 1327 KFGVAHYLHSSYQSYEVGQLSTILSGLVSNKNLFEIAQQHSLTGMLNTAPFQSNSWTPPS 1386
Query: 1068 ---------DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENV 1118
+ S + D+ +F G+K +D +EAL+GA+ G
Sbjct: 1387 FCFETRIFVAPTASVDCLDNRVFCGKK-------------QSDFIEALLGAYFLECGVEA 1433
Query: 1119 GLIFLDRIGIKVDF---------VNVPYQRQFQVHAERLVN------VRHLESLLNYSFR 1163
L + + + N + Q +++ V H++ L+Y+F
Sbjct: 1434 ALHLMRTFRLINEIPPHCFRHGDTNKLHDHQISSMQNPILSRLDQETVDHVQQKLSYNFH 1493
Query: 1164 DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSA 1223
+P LL+ AL Y + ++RLEFLGDA++D L+ Y Y Y P L+ M A
Sbjct: 1494 NPELLLIALMTPFYF---VKSKFERLEFLGDAIMDILVARYFYRHYKHADPCSLSKMIQA 1550
Query: 1224 SVNNDCYALSSVKHGLHKHIL-------HASHELYKRINITVDSFEKLSLGSTFGWESVT 1276
+V + V LH+H+L H+ + N +S + + +
Sbjct: 1551 TVCKPAFCKILVSLKLHEHLLQSSQLSQHSKEAIVLYANYIQNSHSQHAFKQA---DKAI 1607
Query: 1277 SFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
PK L D+ E + AIF+D+G N R V+F + ++ I ET+ P+R+L +
Sbjct: 1608 DGPKVLCDVFEVIVAAIFIDTGYNLERTRLVIFPYVHSFIQSNINLETITEPPIRQLFAF 1667
Query: 1333 CQKNHFSMKK 1342
Q FS +K
Sbjct: 1668 VQSQGFSSEK 1677
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 152/367 (41%), Gaps = 95/367 (25%)
Query: 25 YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR----KPSPFV---------- 70
YQ+ E A+ N I F+++ KTL++IML+ + L +PS
Sbjct: 9 YQIRVYEEAIHHNVIAFMDSNDYKTLVSIMLIDAITEKLPLVHVQPSQQTYSTSENNLAV 68
Query: 71 ---------------AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGD--MGVDFWDGATW 113
+ V V ++A I +TDL V Y G+ + D W
Sbjct: 69 STYHIQNSETLNSRKTIVCVGTKGAVKEKANEIHQYTDLVVRGYSGEESSSISHLDYNHW 128
Query: 114 KEEMSKHEVLVMTPQILLDGLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRL 172
++E S +VLVM Q+ ++ L Y L+ I ++I DECHH+R ++ IM FY +
Sbjct: 129 QKEFSNSQVLVMPQQLFVNLLTRKYLDLSKHICLIIFDECHHSRNAQEHQAIMNGFYCHI 188
Query: 173 LETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLM------------------N 214
S P+IF +++ PI S +S + +D + + DL + N
Sbjct: 189 --PVRSPRPKIFVVSSIPIHS-ISMNLKDLEKNLKDLMVMFSCQTVVVPDRRQDNIQPRN 245
Query: 215 SKVYTCASESVLSNFIPFSTAKFKFYKYD------------EIPHAL----------YT- 251
+ V +S ++F + F F+ D ++P A YT
Sbjct: 246 TDVTVLEYDSTTNDF----NSLFTFHSTDSHDRKELQSYFCKLPQARDGGNAFSDESYTV 301
Query: 252 ---HLADELA----MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA 304
L DE+A I+L+H + + ++ + + K++ +I +T SELGVW
Sbjct: 302 STQQLDDEIAAAQHFIQLQH----DTVSIDSKRLIVTEKQLKRIRAT----FSELGVWCT 353
Query: 305 LKAAETI 311
+K + I
Sbjct: 354 IKLVKEI 360
>gi|449549195|gb|EMD40161.1| hypothetical protein CERSUDRAFT_112373 [Ceriporiopsis subvermispora
B]
Length = 1511
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 215/462 (46%), Gaps = 73/462 (15%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGD 1004
+PSIM L ++L+ LL + +P + A T QE + + LETLGD
Sbjct: 976 LIPSIMRWCSITLTVMSLRKQLLAKNPIS-EVPLALLTTATTAPVAQEQTNYQRLETLGD 1034
Query: 1005 SFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW- 1063
+ LK+ AS QLF Y HEG L+ +K+ +SNA L + + L +I E F P+ W
Sbjct: 1035 TVLKFLASLQLFAQYPLWHEGYLARRKDHAVSNARLAREALGKCLYRWIIRERFVPRKWK 1094
Query: 1064 -----------IIPGDNSGSYELND---------DSLFNGRKIYVTGRKKVKSKTVADVV 1103
I ++S S E + D+ + +++ +K +ADVV
Sbjct: 1095 PLYRVQEPSTIITNAEHSISSEQDSIPVEAEQEVDTELQKKLKKKKQSQQLSTKVLADVV 1154
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA------ERLVNVRHLESL 1157
EALIGA GG ++ G+ + + VP R ++ A E + +E +
Sbjct: 1155 EALIGASYEHGGFDLAADCAALFGMGLTWKKVP-DRISEILARTEPLEEPPTQLYLVERI 1213
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LSPG 1215
LNY+F+ LLVEALTH SY Y+RLEFLGD LD ++T YLY+ PG +PG
Sbjct: 1214 LNYTFKRKELLVEALTHASYHGEHAAMSYERLEFLGDCALDMVVTDYLYHA-PGKEYTPG 1272
Query: 1216 YLTDMRSASVNNDCYAL-----------------------SSVKHG---LHKHILHASHE 1249
++ + + VN+ A ++ +H LH+ ++H+S
Sbjct: 1273 HMHLRKESLVNSHFLAFICLRAFTTTEATSAHWTPKKGTSTTTEHQQIHLHQCLMHSSRR 1332
Query: 1250 LYKRINITVDSFEK--------LSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGC 1299
+ + +I FEK L G+ + W ++TS PK L D++ESL GA+++D+
Sbjct: 1333 VLEDQHIAFSRFEKSGRKIEEMLLRGTMYPWAALTSLQAPKFLSDMLESLLGAVYLDTEG 1392
Query: 1300 NREVVFQSIRPL-----LEPMITPETMRFHPVRELTEYCQKN 1336
+ E V + +R L +E ++ + HPV L + +
Sbjct: 1393 SLEAVREVMRVLGIIEVMEHIVMADVDVQHPVSRLAIWAAQQ 1434
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E L+ +L++N ++ ++TGSGKT IA++ ++ A + + ++ FL P V LV
Sbjct: 23 RGYQKEMLDESLRRNIVIAMDTGSGKTHIAVLRMKLEA---ERETQKISWFLAPTVALVE 79
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ E I + VG G + W D W++ + H ++V TPQ+LLD L +Y L
Sbjct: 80 QQREVIASAIPVSVGIISGASEPNQWKDANLWRKIIQTHRIMVTTPQVLLDALHHAYIDL 139
Query: 142 NM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN------LPRIFGMTASPI 191
I +L+ DE HHA H Y +M+ FY L + P I G+TASP+
Sbjct: 140 GRDIGLLVFDEAHHAVKVHPYNAVMSNFYFDLPPRDPTRGSQGRVRPMILGLTASPV 196
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS---------RKKQNEIV 441
++FV R T + L LLS + + G+++ Q S + Q+ +
Sbjct: 414 LVFVTRRDTVVALSELLSRFPEVAQRFNIGCLLGSSNSFQRHSFLDITRSIPKDSQSATL 473
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
+F+ G N+I++TS+ EEG+D+Q+C VI FDP + S+ QSRGRAR + S ++LM +
Sbjct: 474 RDFKIGDKNLIISTSVAEEGIDIQACGSVIRFDPPVNMVSWAQSRGRARRKKSTFILMFE 533
Query: 502 SGDSTTQ--SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSS 559
G + + E+ A + +V A+ P ++ + Y VESTG + TL S
Sbjct: 534 DGGVHHKLVQQWEDIEARMMALYNDVSRDAASAPEPEDDEDDESEEYVVESTGAVLTLHS 593
Query: 560 SVSLIYFYCSRLPS--DGYFKPT-----PKF----HINKE-MGICT------LYLPNNCP 601
+ S + +CS LPS G F P P+F H+ +E + I T + LP P
Sbjct: 594 ATSHLNHFCSVLPSAHHGDFLPVYDLDPPEFPEGWHVTREAVPIYTGPWGAKVTLPRALP 653
Query: 602 -----IQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
T G+ ++ + A +A LH+ G L DNLLP
Sbjct: 654 KDLRVFSTECVYGSKRSAHRHAAFKAYVALHKAGLLNDNLLP 695
>gi|170033786|ref|XP_001844757.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
gi|167874834|gb|EDS38217.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
Length = 2270
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 169/355 (47%), Gaps = 68/355 (19%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV---------------NVPYQ 1138
+ K+VAD VEALIGA+L G L+ + +GI+V V + PY+
Sbjct: 1917 IPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVCEQPFDPTAPRIPGSSAPYE 1976
Query: 1139 ---RQFQ--------------VHA-------ERLVN-VRHLESLLNYSFRDPSLLVEALT 1173
+Q Q HA E L++ E L Y F+D S L++A+T
Sbjct: 1977 VNGKQIQSIYGYWIPPRSPLLTHAPNPEKSLEHLLDGYSAFEDSLGYRFQDRSYLLQAMT 2036
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
H SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 2037 HASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASL 2096
Query: 1234 SVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWE------------SVTSFP 1279
+V+H HK+ H S L N +D F ++ G + E P
Sbjct: 2097 AVRHDFHKYFRHLSPGL----NDVIDRFVRIQQDNGHSISEEYYLISEDECDEAEDVEVP 2152
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNH 1337
KALGD+ ES+AGAIF+DS + + V++ R ++ P I ++ P+REL E +
Sbjct: 2153 KALGDVFESVAGAIFLDSNMSLDAVWRVYRGMMGPEIEQFSNSVPKSPIRELLEL-EPET 2211
Query: 1338 FSMKKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
KP + VTVEV G TF + + + AK A K L+ L+
Sbjct: 2212 AKFGKPEKLADGRRVRVTVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2261
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + +S
Sbjct: 1731 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVS 1789
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG + L + F+P W+ P
Sbjct: 1790 NLNLYRLGRRKVLGESMIATKFEPHDNWLPP 1820
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R++Q+E L +A ++N I+ L S K IA+ L+ + LR + K L
Sbjct: 17 RDFQVELLASARERNLILCLAHNSNKEFIALKLIHELGFQLR------STAQRRKRTLYI 70
Query: 83 QQAEAI----KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
+++ + TDLKV GD W+ ++ ++V++ + LD + Y
Sbjct: 71 SNNDSVYSLMRNLTDLKVVHVDGDE-------PDWERIVADYQVIIANERKCLDAVVCGY 123
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT-----ASPIKS 193
+L+ + +L++DECH G + A + +E+Y R E P+I G+ A I
Sbjct: 124 LELDEVNLLVIDECHKIYGNVEIAELFSEYYERCRER-----PKILGLAGPLHNAGCIPG 178
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH----AL 249
++S+ ++ LE + +K T S + + + T + P AL
Sbjct: 179 RLSA-------ELEQLERCLKAKAETA---SDIVTVLRYCTKPKELILQCAPPQQSELAL 228
Query: 250 YTHLADELAMIELKHTRS-----LENLDLNEAQAELIRKKVSKIN--STLLYCLSELGVW 302
Y E M L+ R E+ + E + KV +N L L E+G W
Sbjct: 229 YLREIVETQMTFLQEHRYDPSEIYEDDEFLEELKHIPDPKVDPLNFLREFLTVLDEMGPW 288
Query: 303 LALKAA 308
A +AA
Sbjct: 289 CADRAA 294
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 391 IIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQCQSR------KKQNEIV 441
+IF T +L SLL E + P+ +Y ++ + + +KQ E++
Sbjct: 490 LIFCNSKFTTKILYSLLYEAVRSDPQLSYINVQYTVDKSANPITEPKEAEVEHRKQEEVL 549
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ FR N+++ TS+LEEG+D+ CNLVI ++ + S++Q +GRAR ++ ++L+V
Sbjct: 550 KRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARAPSAYHILIV 608
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L N+ PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1723 LTNHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGK 1779
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1780 LSHLRSKQVSN 1790
>gi|403179647|ref|XP_003337961.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165151|gb|EFP93542.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1460
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 212/444 (47%), Gaps = 58/444 (13%)
Query: 899 FHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
FHV N LSK + +P +I LP +LC+ P S+ + F+++PS+ L L
Sbjct: 873 FHVLNNLSKS-ESTVVQPHRIL--LPLKLCKGTHIPRSM--WKVFSYLPSLTRLLHDSLQ 927
Query: 959 AVNLKNMLLDHCMQNVTIPTIKVL---EAITTKKCQEDFHLESLETLGDSFLKYAASQQL 1015
A L + + PTI +L +A+T + ++LETLGD+FLK A S +
Sbjct: 928 ATTL--------FKRLDFPTISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHV 979
Query: 1016 FKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYEL 1075
+ ++ EG +S + R + NA L + + LP I ++ F + P G
Sbjct: 980 YLSHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASILSQRFRTDRFRDPQTEDGK--- 1036
Query: 1076 NDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-- 1133
L NG +K+ + ++DVVEAL+GA TGG +GL +IG +D
Sbjct: 1037 ---ELPNG-----NFSRKIPKRVLSDVVEALLGAGFLTGGIELGL----KIGTALDLCFG 1084
Query: 1134 -NVPY-QRQFQVHAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYM 1178
P+ +R + E L+ + LE + Y F++ LLV+ALTH S+M
Sbjct: 1085 GTAPWSERPVNIGLESITHDALEPSTLLKCQALEEKIGYVFKEKLLLVQALTHRSANSFM 1144
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH- 1237
CY+R E+LGDAV+D I + Y ++ + LT R+ V+N ++K
Sbjct: 1145 T----NCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFLALKKL 1200
Query: 1238 GLHKHILHASHELYKRINITVDSFEKLS-----LGSTFGWESVTSFPKALGDIIESLAGA 1292
GL + I+HAS + +++ + + + V PK L D++E++ GA
Sbjct: 1201 GLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFDPPKILNDVLEAIVGA 1260
Query: 1293 IFVDSGCNREVVFQSIRPLLEPMI 1316
+FVDSG N + ++++ + E +I
Sbjct: 1261 VFVDSGFNLQSAYRTLDIIFEDVI 1284
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 116/222 (52%), Gaps = 11/222 (4%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF----VAV 72
DT+ R YQ E LE A K+N I+ +TG+GKT +A+ L+ A + P+ +
Sbjct: 17 DTMKIPRLYQAELLEEAKKRNIIIRADTGTGKTFVALSLITWIA--AQSPANHDDHRIQA 74
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
FL P L QQAE I+ H L+V Y GD+ + W+ W E+++ +V+V T QI D
Sbjct: 75 FLAPTRPLAHQQAEYIQKHCTLRVKAYTGDLQPELWNIDKWHSELNEVDVIVSTAQIFYD 134
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ Y+KL + +LI DE HH R H Y IM YHRL + LP+I G+TASPI
Sbjct: 135 LISKGYWKLEDVSLLIFDEAHHCRKNHIYNQIMRSHYHRLAKDPTVRLPKILGLTASPIW 194
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVY---TCASESVLSNFIP 231
+ D I L++ + +++Y T + NF P
Sbjct: 195 NYKDLERAD--SDIKSLQSALAAQIYEVKTHTEDVCQHNFKP 234
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 33/296 (11%)
Query: 368 LTEKIVCLIESLLEYR---GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK------ 418
+ K+ L + L+ Y+ ++ CI+FVER A LL LL R+ K
Sbjct: 341 FSSKVAVLNKILVSYKEKDNHDNFLCIVFVERRQHA----QLLPFLLERNAQLKGFLRPT 396
Query: 419 --TKYIAGNNS---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
T + GN + GI+ SR QN+ V +FR G N+ +ATS+ EEGLD +SC +VI F
Sbjct: 397 ALTGHAGGNVNDLIGIKMDSRT-QNKAVAKFRTGEYNLTIATSVAEEGLDFRSCRVVIRF 455
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC 533
D T +IQSRGRAR + SDY++M+ +G TT LE + +++ + +
Sbjct: 456 DLITTWKGYIQSRGRARARESDYIVMLPNG--TTNKYLE-FTGKEEQLKAALYNRPEDEL 512
Query: 534 SPLNNHMYGEDFYHVESTG--TIATLSSSVSLIYFYCSRLPSDGYFK-PTPKFHIN--KE 588
+ + G +I T S++ SL+ C +P D + P++ I +
Sbjct: 513 IEEGEEEWTPQLICQLAGGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPQYEITWLGD 572
Query: 589 MGICTLYLPNNCPIQ------TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
C + LP + T +A K K++A EACK L ++ L + LP
Sbjct: 573 NFQCQVTLPPMAALHPSQRTFTGLAMATKKDAKRSAAFEACKVLRELDVLNQHFLP 628
>gi|295670335|ref|XP_002795715.1| RNase3 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284800|gb|EEH40366.1| RNase3 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1346
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 227/973 (23%), Positives = 393/973 (40%), Gaps = 178/973 (18%)
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSGIQCQSRKKQNEIVEE 443
D +CI+FVE+ +A +L L S + RH +T + G + +G + S ++Q + +
Sbjct: 371 DTKCIVFVEKRHSARLLGELFSRIGTRHM--RTGVLIGVRPDEAGGEKVSFRQQFLTLLK 428
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR+G +N + A + + L Q C L + + + F +S R+
Sbjct: 429 FRKGELNCLYAHMMERDNLIHQRC-LDEVQEAENIMRQFCESLPEDRIIRG--------- 478
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSL 563
T L+ +L + + + V STG+ T +S++++
Sbjct: 479 ---TSDELDKFLDKERRRKT----------------------FTVSSTGSKLTYNSALAV 513
Query: 564 IYFYCSRL--------PSDGYFKPTPKFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKT 613
+ Y S L + + I++ G +C + LP P++ + + +
Sbjct: 514 LAHYASSLHMVANGIQQYENEMSTRVNYFIHRIRGAFVCEVVLPEKSPVRGLTGRPAVAK 573
Query: 614 L--KQAACLEACKKLHQIGALTDNLLPDI---VVEKHDAQKRGNEPYNAEHPIYFPPELV 668
L KQ+A E C L + G L D L + +A+ ++ + P+L
Sbjct: 574 LSAKQSAAFETCLILRKNGLLDDYFLSKYHKRLPLMRNAKLAIKSKKTNQYGMMVKPKLW 633
Query: 669 NQSPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELES-EIKKVNFDLEVERGRLTV 727
+S T + ++ L+ + +VL R L + + + ++E +++
Sbjct: 634 EKSRGMTPCEVYATVLTLRPSAKLRRVHQPLVLLTRESLPKFPVFPLYIETDIECDVVSI 693
Query: 728 NLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDKLNEILDGFELRDNLEIDYLLLPST 787
L+ +Q+ +++ L F + +F+ + D ++ + +LE +L S
Sbjct: 694 PLR--ASMQVSQSELDLFTTFTLRIFQDLFHKVYDHQPAMMPYWLAPISLEYGNVLEDSN 751
Query: 788 -GQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQ 846
QLIDWK + V N I T P + + N + +G+
Sbjct: 752 LRQLIDWKIIQYV----------------QENPEICWTSDMPRSS--LENICMFDKWDGR 793
Query: 847 IYCITGVLG-HLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL 905
T L +L + + YKK G C +P++ + +N L
Sbjct: 794 YRYFTSELELNLRPSDPPPPTMAKRSLYKKSRLNFLGT--CDWNQPVVRAELVRLRRNLL 851
Query: 906 SKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNM 965
R +Q++ + ++ + PE RI P ++ F +FTF P+++ R++S L+A+ N
Sbjct: 852 D--RTTEQEKGVETAYYICPEPLRISALPAPVAVF-AFTF-PAMISRIESYLIALEACNK 907
Query: 966 LLDHCMQNVTIPTIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAA 1011
L Q IP + LEA+T + H E LE LGD FLK +
Sbjct: 908 L-----QLTIIPEL-ALEALTKDSDNTEEHRAEQIHFQRGMGKNYERLEFLGDCFLKMST 961
Query: 1012 SQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSG 1071
S LF +N E VK+ +I N L + F+RT+ F + W
Sbjct: 962 SISLFAMNADNDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRTQGFSRRNW-------- 1013
Query: 1072 SYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
Y G K +++ K++AD+ EALIGA L +GG F +
Sbjct: 1014 ---------------YPEGIKLLQADKSIADICEALIGASLLSGGRVHR--FDTAVKAVT 1056
Query: 1131 DFVN-----------------VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALT 1173
FVN +P + + +L + + L Y F+ P LL A T
Sbjct: 1057 AFVNSENHQVSDWQSYVGLYSLPRYQITEADDTQLDLAQQIGDRLGYRFKYPRLLSSAFT 1116
Query: 1174 HGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
H SY + ++P CYQRLEFLGD++LD + +LY+KYP P +LT+
Sbjct: 1117 HASYPTVWSKVP-CYQRLEFLGDSLLDMVCVEHLYHKYPDRDPQWLTE------------ 1163
Query: 1232 LSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAG 1291
H + ++H + + + K S+ TFG VT L +++E+ G
Sbjct: 1164 ----------HKVFSNHLKMRGWKLKLQRL-KASIHQTFGQRPVT-----LRNMLEAYIG 1207
Query: 1292 AIFVDSGCNREVV 1304
AIFVDS + EVV
Sbjct: 1208 AIFVDSNFSFEVV 1220
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R YQLE E A N I L+TGSGKTLIA++LL+ A R P ++ FLV
Sbjct: 99 REYQLELFEKAKTTNIIAVLDTGSGKTLIAVLLLKHMIRIELADRARGKPPRISFFLVDS 158
Query: 78 VVLVPQQAEAIKMHTD 93
V LV QQA +K + D
Sbjct: 159 VALVYQQAAVLKANID 174
>gi|240275432|gb|EER38946.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
Length = 495
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 154/315 (48%), Gaps = 29/315 (9%)
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDN 1069
A S LF +N E VK+ +I N L KL F+RT+ F + W G
Sbjct: 2 ATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVRTQGFSRRNWYPEGIK 61
Query: 1070 SGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGL--------I 1121
+ +S N ++ + KT+AD+ EALIGA L +GG+ +
Sbjct: 62 LLQGKAKSESAQN--------KQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTV 113
Query: 1122 FLDRIGIKV-------DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTH 1174
F+D +V D ++P + Q A +L + + + L Y F P LL A TH
Sbjct: 114 FVDSDNHRVSDWNSYIDLYSLPSYQIVQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTH 173
Query: 1175 GSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
SY +P CYQRLEFLGD++LD + YLY+ YP P +LT+ + A V+N
Sbjct: 174 ASYPSAWSTVP-CYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGA 232
Query: 1233 SSVKHGLHKHILHASHELYKRINITVDSFE---KLSLGSTFGWESVTSFPKALGDIIESL 1289
+VK GLHKH+L+ S+ L+ +I + E S S W + + PK L D++E+
Sbjct: 233 VTVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCLPDMLEAY 292
Query: 1290 AGAIFVDSGCNREVV 1304
GAIFVDS + EVV
Sbjct: 293 IGAIFVDSNFSFEVV 307
>gi|321461347|gb|EFX72380.1| hypothetical protein DAPPUDRAFT_308316 [Daphnia pulex]
Length = 1741
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 162/325 (49%), Gaps = 41/325 (12%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------DFVNVP----YQRQ 1140
+ K++AD VEALIGA+L G L+F+ +G+KV + P +
Sbjct: 1417 IPDKSIADCVEALIGAYLRACGPRGALLFMSWLGLKVLPVINEGSYGYWTPPISPLVDQP 1476
Query: 1141 FQVHAE---RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
+H E L E + Y F D S L++A +H SY L + CYQRLEFLGDAVL
Sbjct: 1477 LDIHVELDRMLAGFESFEEKICYKFNDRSYLLQAFSHASYYLNRLTDCYQRLEFLGDAVL 1536
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
DYLIT YLY P PG LTD+RSA VNN +A+ + ++ H++ H S L N
Sbjct: 1537 DYLITRYLYENLPRHPPGALTDLRSALVNNTTFAVLAERYEFHRYFKHLSPSL----NQI 1592
Query: 1258 VDSFEKLSL--GSTFGWE------SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIR 1309
+D F K G + E PK LGD+ ES+AGAI++DS + V++
Sbjct: 1593 MDKFIKAQEENGHSINEEYYMIEAEDVEVPKVLGDVFESVAGAIYLDSHMSLNAVWRVYY 1652
Query: 1310 PLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRI-SGKAAVTVEVQANGRLFE 1366
+++ I + + P+REL E + + K A R+ G+ VTV+V G
Sbjct: 1653 NMMKKEIDEFSKNVPKSPIRELLE-LETDRVKFGK--AERLPDGRLRVTVDVIGKG---- 1705
Query: 1367 HTF--LDADKKTAKKVACKEVLKSL 1389
TF + + + AK A K L++L
Sbjct: 1706 -TFKGIGRNYRIAKCTAAKYALRTL 1729
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 162/656 (24%), Positives = 290/656 (44%), Gaps = 110/656 (16%)
Query: 391 IIFVERVITAIVLQSLL---SELLPRHCTWKTKYIAGNNSGIQCQS----RKKQNEIVEE 443
+IF ER TA +L LL S P+ Y G+ + +KQ ++++
Sbjct: 356 MIFTERRTTAKLLYHLLKDASRCDPQLAYLSPLYTVDRMEGVSVKEMENEERKQEDVMKR 415
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR N++VATS+LE+G+DV +C+LVI +D ++ +++ S+ RAR + + Y+LMV++
Sbjct: 416 FRSRDCNILVATSVLEDGIDVPACHLVIRYDLPQSYRAYVHSKARARAKKAHYILMVEN- 474
Query: 504 DSTTQSRLENY---LASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV--------ESTG 552
R++ + L+ + + +LS + S + ED + E++
Sbjct: 475 -----ERMDEFLVDLSHFHATEQILLSKSGYHNSVAEFFNHNEDMLNCIQAPYPSDETSN 529
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEM----GICTLYLPNNCPI-QTVIA 607
+ A+L +++S+I YC++LPSD + + TP + I IC+L LP N P+ +TV++
Sbjct: 530 SYASLQNAISIINRYCAKLPSDCFTRLTPVWRIQNVFLDVAYICSLQLPINSPLRKTVLS 589
Query: 608 Q--GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPP 665
Q + T K++A LEAC+ LHQ L D+ P K + + E YNA+ P
Sbjct: 590 QPMPSKVTAKRSAALEACRLLHQKKELDDHFYP---TGKENLRLEEEEDYNADLEEENVP 646
Query: 666 ELVNQSPQDTKITYH------------------CYLIELKQHFNYDISARNIVLAMRT-E 706
E + + + Y+ CYL + + I + +
Sbjct: 647 ENLPRPGTTKRRQYYYKQVADPFINGIPRPDQPCYLYAITMVLSEPIPEEQNTRGRKIYK 706
Query: 707 LESEIKKVN------------FDLEVERGRLTVNLKHLG-RIQLIPNQVLLCRRFQITLF 753
E+ I+ + F + G + V + + I++ Q+ FQ +F
Sbjct: 707 PETSIQSLGILNSKPLSQICPFPIFTRSGEVEVEIVKISDAIRVTEGQLKQISDFQRYIF 766
Query: 754 RVIMDHNLDKLNEILDGFELRDNLEIDYLLLP--------STGQLIDWKTVATVLFPRDN 805
R ++ +L+K +LD + N + YL++P + +D+ + + RD+
Sbjct: 767 RNVL--SLEKDPMLLDVY----NADCSYLIVPLRRSSFSEHSKLSLDFVFIDLISSVRDS 820
Query: 806 GSK---HNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSL 862
+ + +F+ R L + + + Q + + + LN S
Sbjct: 821 KPQLIAEEVRSGYVFDPR--------LFSDAVVMKWYRDQEHPQCFYVAEIFYELNPQSK 872
Query: 863 FTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYL----------SK 907
F NN T++K+Y +YGIQ+ ++PLL+ R F Y+ S+
Sbjct: 873 FPDNN--YPTFEKYYRHKYGIQIQNLKQPLLDVDHTSARLNFLTPRYVNRKGVMLPTSSE 930
Query: 908 CRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK 963
++ Q+E + L PELC I P S S + +P I++RL LLLA L+
Sbjct: 931 HTKKTQRESLQQKQILVPELCSI--HPFSASLWRQAVCLPCILYRLNGLLLAEQLR 984
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A T + +LE LET+GDSFLKYA + L+ Y + HEG LS + R +SN L
Sbjct: 1242 ILQAFTMSSANDGINLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQVSNLHL 1301
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIPG 1067
+LG ++ G + F+P + W+ PG
Sbjct: 1302 YQLGKKKLFGGCMVATKFNPHENWLPPG 1329
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 111 ATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH 170
+ W EE+ K +VLVMT I L+ + ++ K+N + +LILD+CH+ ++T
Sbjct: 4 SRWTEELGKSQVLVMTYSIFLEVIHKNFLKMNKLNLLILDDCHNVMNNEALKGVLT---- 59
Query: 171 RLLETGDSNL-PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLS 227
L E S++ PRI G+TAS + + E Q I LET + S + T S +VLS
Sbjct: 60 -LYENAASSVHPRILGLTASIVNNICKPMELS--QLITILETKLKSVIST--SNNVLS 112
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE +GD+ L Y IT YLY KY + G L+ +RS V+N
Sbjct: 1258 ERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQVSN 1298
>gi|395330301|gb|EJF62685.1| hypothetical protein DICSQDRAFT_104190 [Dichomitus squalens LYAD-421
SS1]
Length = 1453
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 208/435 (47%), Gaps = 53/435 (12%)
Query: 923 LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-- 980
LP ELCR + P + + SF+ +P + HRL + A ++ L +P I
Sbjct: 902 LPIELCRWALIPRHV--YQSFSILPELCHRLTDVWRAHEVRTAL--------KLPPIVDD 951
Query: 981 -VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAA 1039
+++AIT F+ + LET GD+ LK A L+ Y + HEG L K I+N
Sbjct: 952 LLVQAITLPSANAGFNNQRLETFGDAVLKLCAVVHLYNRYPHRHEGQLDNMKRTAIANRT 1011
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMW--IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSK 1097
L E L + E+ ++W ++ GD ++LF R R+ + +
Sbjct: 1012 LLARALEHGLEEHLTPETQSIRLWRYVVTGD---------EALFAVRPCRRALRQYPR-R 1061
Query: 1098 TVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV------ 1151
++ D +EA++GA +TGG ++ L +G+ Y R ++ RL
Sbjct: 1062 SLQDCMEAILGASFATGGIDMALRAGTALGLSFGGPTPWYVR----YSGRLKEAPAAPLF 1117
Query: 1152 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
L+ L Y+F+ LL+EA+TH S+ + YQRLEFLGDA +D ++T YLY K+P
Sbjct: 1118 AGLQETLGYTFKHGHLLLEAITHPSFRSTDC-SSYQRLEFLGDAFIDMVVTEYLYRKFPS 1176
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
+ G L+ RS +V +A +VK LHK +L + EL I+ V E+++
Sbjct: 1177 ATSGQLSWARSRAVCGPAFASIAVKRLALHKLLLINNVELSMAISKHVPILEEITDEEII 1236
Query: 1271 --GWESVTSFPKALGDIIESLAGAIFVDSGCN-------REVVFQSIRPLLEPMITPETM 1321
GW+ PKAL D++ES+ GA+FVD N E+V + + L P + +
Sbjct: 1237 INGWKH--DPPKALSDVLESVLGALFVDCDYNYDKAAAITEMVLEDLLAALRPDLPKD-- 1292
Query: 1322 RFHPVRELTEYCQKN 1336
PV EL + ++
Sbjct: 1293 ---PVTELMVWVAQS 1304
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 12/210 (5%)
Query: 8 SDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS 67
S + +E+S LP R YQ E A + N I L+TGSGKT I+ +L++ +
Sbjct: 2 SVSLDEISDTLLP--RRYQEEIFVRAQQGNVIAALDTGSGKTFISTLLIK-WISAQESTE 58
Query: 68 PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTP 127
+ VFLVPKV LV QQ E I T L+V + G D D W + +V VMT
Sbjct: 59 HKITVFLVPKVALVQQQGEFIAKQTSLRVRMFSGATAHDMSDRGGWANDFETADVFVMTA 118
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
QI L+ L S++ L+ + +L+ DECHH R H Y IM E++ +T + P++FGMT
Sbjct: 119 QIFLNLLTHSHWSLSKVCLLVFDECHHTRKNHAYNGIMREYF----QTAEGCRPKVFGMT 174
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKV 217
ASPI + +++E + LE +++KV
Sbjct: 175 ASPIWNPRNAAE-----SLSTLEKNLDAKV 199
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 31/295 (10%)
Query: 369 TEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
+ K+ L E L R + I+FVE+ A L S+L + T K + + G+ SG
Sbjct: 358 SPKVKVLAEELFS-RYTSTFQGIVFVEQRHIATCLASMLRRIPFLVHTIKCEPLVGHGSG 416
Query: 429 IQCQSR------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
+S + Q + V+ FR +N++VATS+ EEGLD +C+LVI FDP + + +
Sbjct: 417 AVAKSHLKGMAMRNQRDTVQLFRERRLNLLVATSVAEEGLDFPACDLVIRFDPVQHMVGY 476
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPC--------- 533
+QSRGRAR + S +++MV+ G R +L S ++K V L
Sbjct: 477 LQSRGRARHKTSTFIIMVQEGSQAQAERYLEFLRSEPHLKK-VYQQRDLVPPDVEEEEDE 535
Query: 534 --SPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG- 590
+P + + Y V STG I T ++++SL+ CS +P D + TP H + G
Sbjct: 536 SDAPDPFDLARRERYVVPSTGAILTYNTAISLLNHLCSLIPRDRF---TP-MHAPRYTGD 591
Query: 591 -ICTLYLPNNCPIQT--VIAQGNIKTLKQ----AACLEACKKLHQIGALTDNLLP 638
+ T+ LP+ P+ + ++ +G K K+ AA A K LH + D LLP
Sbjct: 592 FVATVTLPSTLPLPSNLLVYEGPPKRSKKEARRAAAFFAVKSLHALNVFDDYLLP 646
>gi|402595090|gb|EJW89016.1| type III restriction enzyme [Wuchereria bancrofti]
Length = 1410
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 173/340 (50%), Gaps = 48/340 (14%)
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYQ 1138
++ + K++AD VE+LIGA L G L F+ +G+KV F++ Q
Sbjct: 1068 QQSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTEPVQMEQPLLRFIDTTDQ 1127
Query: 1139 RQFQVHAERLVNVR----HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1194
+ + ++ LE + Y F D + L++A TH SY I CYQRLEFLGD
Sbjct: 1128 PDKSLRKLNDLWIQFQFSKLEDCIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGD 1187
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVLDY+IT +L+ SPG LTD+RSA VNN +A +VK+ HKH + L+ I
Sbjct: 1188 AVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMI 1247
Query: 1255 ----------NITVDSF-EKLSLGST-----FGWESVTSFPKALGDIIESLAGAIFVDSG 1298
N++ +F E++ + +T G E PKA+GDI ES+AGAI++DSG
Sbjct: 1248 EKFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSG 1307
Query: 1299 CNREVVFQSIRPLLEPMIT------PETMRFHPVRELTEY-CQKNHFSMKKPVASRISGK 1351
+ +V++ L++ I P + P+REL E ++ FS + + +GK
Sbjct: 1308 RSLNIVWRVFYNLMKETIDECCSNPPRS----PIRELLEMEPERARFSKLERILE--TGK 1361
Query: 1352 AAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
VTV++Q R T + + AK A K L+ LR+
Sbjct: 1362 VRVTVDIQGKCRF---TGMGRSYRIAKCTAAKRALRYLRS 1398
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + LE LET+GDSFLKYA + LF T HEG LS + + +SN L
Sbjct: 894 LLQALTLSNASDGISLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEVSNCNL 953
Query: 1041 CKLGCEQKLPGFIRTESFDPK-MWIIP 1066
+LG + LP I FDP W+ P
Sbjct: 954 YRLGRKHNLPSLIIGSKFDPNDGWLPP 980
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNN 599
Y VESTG TL++++SL+ YC++LPSD + + P+ I ++ M L LP N
Sbjct: 31 YTVESTGAQVTLTTAISLVNRYCAKLPSDIFTRLVPQNTIVPETIGDRVMYRAELLLPIN 90
Query: 600 CPIQTVIAQG----NIKTLKQAACLEACKKLHQIGALTDNLLP 638
PI+ I + K + A LEAC++LH+ L D LLP
Sbjct: 91 SPIKETIKLKKPLESKKLAQMAVALEACRRLHKRKELNDYLLP 133
>gi|347440705|emb|CCD33626.1| hypothetical protein [Botryotinia fuckeliana]
Length = 984
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 208/853 (24%), Positives = 335/853 (39%), Gaps = 147/853 (17%)
Query: 591 ICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTDNLLPDIVVEKH- 645
IC LP PI+ I G T KQ +A E C LHQ G + D LL H
Sbjct: 103 ICEAILPEEAPIRGAI--GRPATTKQVAKCSAAFETCVILHQKGYINDYLLSTFKRSAHM 160
Query: 646 --------DAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYHCYLIELKQHFNYDISAR 697
D +K+ E Y+ + P L S + + ++ ++ LK N D +++
Sbjct: 161 MRNALLAVDGKKQ--EAYDMQTK----PTL--WSSKGKQGIFYMTVLSLKSPDNLDRASQ 212
Query: 698 NIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIM 757
+ L R+ L ++ + R T + I L N++ F + LF+
Sbjct: 213 PLGLLTRSPL-PDLPEFVLHFGAGRNSPTSCVPLASSITLEKNKLDQVNMFTLCLFQ--- 268
Query: 758 DHNLDKLNEILDGFELRDNLEIDYLLLPST--GQLIDWKT--------VATVLFPRDNGS 807
++ D + Y L+P ++DWK+ TV + +D +
Sbjct: 269 --------DVFSKAYKSDPDSMPYFLVPINCLNAIVDWKSQNPMSIIDWETVEYVQDFEN 320
Query: 808 KHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNG-----------QIYCITGVLGH 856
K + H + + P +G + + V +
Sbjct: 321 KQA-------DKPWEHKPWLGKPDDYFKDKFITDPFDGSRKLWSVGITKEYRPLDPVPPN 373
Query: 857 LNANSLFTRNNGSVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKE 915
+NN ++ Y + + FD E P++ I +N L + + +
Sbjct: 374 TAPRKGARKNNSNIMEYSCSLWAKARAKRTFDEEQPVIEATYISLRRNLLDEFDGGELET 433
Query: 916 PSKISFELPPELCRIIMAPISLS----TFYSFTFV-PSIMHRLQSLLLAVNLKNMLLDHC 970
K C II+ P+ +S T + ++ P+I+HR++S L+A+ ++L
Sbjct: 434 SKK---------CFIILEPLKVSPLPTTVVAMAYLLPAIIHRVESYLIALEATDLL---- 480
Query: 971 MQNVTIPTIKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLF 1016
++ I LEA+T H E LE LGD FLK S L+
Sbjct: 481 --HLDIRPDLALEAVTKDSDNSGEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLY 538
Query: 1017 KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELN 1076
++ E V + +I N L + +L +IR+ +F+ + W G
Sbjct: 539 GLNPDSDEFRYHVDRMCLICNKNLFNTALKLELYKYIRSAAFNRRAWYPEGP-------- 590
Query: 1077 DDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------ 1130
L G+ K+ K+VADV EA+IGA L + E+ + R +V
Sbjct: 591 --ELLRGKTATAPNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDNH 648
Query: 1131 ------DFVNVPYQRQFQVH---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML-- 1179
D+ + + ++Q A ++ R +E Y F+ P LL A H +Y+
Sbjct: 649 NAVVWSDYYKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFIY 708
Query: 1180 PEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGL 1239
+IP CYQRLEFLGD++LD +L++ +P P +LT+ + A V+N VK G
Sbjct: 709 EQIP-CYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLGF 767
Query: 1240 HKHILHASHELYKRI-NITVDSFEKLSLGSTFG--------------WESVTSFPKALGD 1284
HKH+L ++ K I + + D E L T W +V PK L D
Sbjct: 768 HKHLLTLDSQVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLPD 827
Query: 1285 IIESLAGAIFVDS----GCNREVVFQSIRPLLEPMITPET-MRFHPVRELTEYCQKNHFS 1339
I+E+ GAIFVDS G + IR E M +T HP LT + QKN
Sbjct: 828 IVEAFIGAIFVDSEYDYGEVEKFFEMHIRWYFEDMGIYDTYANKHPTTFLTNFLQKNMGC 887
Query: 1340 MK-KPVASRISGK 1351
PV+ + G+
Sbjct: 888 EDWAPVSKEVPGE 900
>gi|290993372|ref|XP_002679307.1| dicer helicase [Naegleria gruberi]
gi|284092923|gb|EFC46563.1| dicer helicase [Naegleria gruberi]
Length = 857
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 241/524 (45%), Gaps = 89/524 (16%)
Query: 19 LPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV-FLVPK 77
L AR YQ E +E+ +NTI+ TG+GKT IA +L+ L +PF V F+V +
Sbjct: 104 LSNAREYQKELVEHCKDENTIIVAPTGAGKTFIAALLIHHMLNL----NPFKKVLFIVNQ 159
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
+ LV QQA A++ KVG + G+ WK E VLV T QI+L+ L+ S
Sbjct: 160 ISLVEQQARALREFGIEKVGAFHGEKK----SIKNWKLETKDFTVLVCTIQIILNVLQYS 215
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP-IKSKVS 196
+ +++LI DECHH H + +M ++Y G +PRI G++A+P K+ ++
Sbjct: 216 DI-FDDLQLLIFDECHHTHSNHPFKVLMRDYYKPRKHAG-LLIPRILGLSATPAAKNTIA 273
Query: 197 SSEQDYWQKIHDL----------ETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
+ Q HDL E + + V+T + +S+ + PFS + + + ++ I
Sbjct: 274 ETLLKILQLGHDLDCTVRQVENNEEELGTFVFTPSMKSISVDMDPFS-LRLRDFIFNAIR 332
Query: 247 HALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
+ + L++ S ++D+++++ + E WL LK
Sbjct: 333 G---------VKIKLLENFSSDADVDMDDSK----------------FGTDEADEWLDLK 367
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
Y+ + D ++ L ++ +S + NL
Sbjct: 368 MNHVTGTYDKE--------------------DDNRNLDDFI----RYSKSNKQNSNL--- 400
Query: 367 LLT-------EKIVCLIESLLEYRGV-EDIRCIIFVE-RVITAIVLQSLLSELLPRHCTW 417
+LT K L + L +Y+ +++R +IFV+ R+ L+ L SE P +
Sbjct: 401 ILTCSLPIHCAKRFALAKLLKQYKETGKELRALIFVKTRIGCKETLEFLQSE--PDLKDY 458
Query: 418 KTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
I SG+ + +QN I++ FR+G+VN +++TS+ EEGLDV +C+LVI D
Sbjct: 459 LKVDILLGKSGM---TSNQQNTILDNFRQGIVNTLISTSVAEEGLDVPACSLVIRLDGIE 515
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
T + IQSRGRAR NS++ + S S Y KM
Sbjct: 516 TTKTMIQSRGRARSANSEFYCIHHSNSVEASSSYGKYQTQEQKM 559
>gi|320590575|gb|EFX03018.1| rnase3 domain containing protein [Grosmannia clavigera kw1407]
Length = 1246
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 191/417 (45%), Gaps = 76/417 (18%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK---VLEAITTKKC-----QEDFHL- 996
+P I+HR++S L+A+ ++ + IP I+ LEA+T K C Q++ L
Sbjct: 700 IPVIIHRIESTLIALEATSV--------IGIPRIRPELALEAVT-KDCDNPDAQDETPLN 750
Query: 997 ---------ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
E LE LGDSFLK A S LF + E V++ +I N L +
Sbjct: 751 FQAGMGRNYERLELLGDSFLKLATSIALFTLVPDKDEFEYHVQRMCMICNRNLFNNALDM 810
Query: 1048 KLPGFIRTESFDPKMWIIPG-DNSGSYELNDD--------------SLFNGRKIYVTGRK 1092
KL +IR+ FD + W P + +G ND+ L G++ +
Sbjct: 811 KLEEYIRSREFD-RTWYPPTIEEAGKSTDNDNYSDNTPAPPSQNGLVLQKGKRTQLPTHH 869
Query: 1093 KVKSKTVADVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVH------- 1144
+ KT+ADV EA+IGA +L+T E + + + V P Q + +
Sbjct: 870 PLGDKTIADVCEAMIGAAYLTTYEERNFDLAVQAVSAVVKSKLHPMQSYAEYYTAYKPPG 929
Query: 1145 -------AERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDA 1195
A +L + L Y FR P LL A TH SY + +P YQRLEFLGDA
Sbjct: 930 WQLCPSTAAQLHMAVSIAKDLGYQFRFPRLLRSAFTHPSYPRIYENLP-SYQRLEFLGDA 988
Query: 1196 VLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK--- 1252
+LD I YL++K+ P +LT+ + A V+N A SV G H+HIL S E+ K
Sbjct: 989 LLDMAIVDYLFHKFSNKDPQWLTEHKMAMVSNQFLAFLSVSLGFHRHILSFSGEMRKQIL 1048
Query: 1253 ---------RINITVDSFEKLSLGSTFG---WESVTSFPKALGDIIESLAGAIFVDS 1297
R+ ++ E S F W VT PKAL D++E+ GA+FVDS
Sbjct: 1049 EYVTKVEEERVRAESEAVEAGRPASEFARDYWVHVTHPPKALADVLEAYVGALFVDS 1105
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 20/213 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK--------PSPFVAVFL 74
R+YQ+E E A ++N I L+TGSGKTLIA +LLR +++ K ++ FL
Sbjct: 125 RDYQVELFEKAKQKNVIAVLDTGSGKTLIAALLLR---HMIDKELEDRSQGKPARLSFFL 181
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGAT-WKEEMSKHEVLVMTPQILLDG 133
V KV LV QQ ++ + V K+ GD W + W + + + +V T ILL
Sbjct: 182 VDKVALVFQQHAVLECNLSHSVAKFSGDKVDLRWTSKSFWDDVLRDNMAIVCTADILLKC 241
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L SY + I +LI DE HH + H YA I+ +FY SN P+IFGMTASP+ +
Sbjct: 242 LHHSYVCMEQINLLIFDEAHHTKKNHAYARIIKDFY---AHECPSNRPKIFGMTASPVDA 298
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVL 226
+ + + Q +LE L++S++ T +++ +L
Sbjct: 299 RTNIA-----QAAEELEALLHSEIATVSNDLLL 326
>gi|168177328|pdb|3C4B|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 132/257 (51%), Gaps = 28/257 (10%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
E +NY F++ + L++A TH SY I YQRLEFLGDA+LDYLIT +LY S
Sbjct: 18 FEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHS 77
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFG 1271
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F K L G
Sbjct: 78 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVKFQLEKNEXQG 133
Query: 1272 WES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
+S PKA GDI ESLAGAI+ DSG + EVV+Q P +P+I
Sbjct: 134 XDSELRRSEEDEEKEEDIEVPKAXGDIFESLAGAIYXDSGXSLEVVWQVYYPXXQPLIEK 193
Query: 1319 ETMRF--HPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKK 1375
+ PVREL E + FS P GK VTVEV G+ + +
Sbjct: 194 FSANVPRSPVRELLEXEPETAKFS---PAERTYDGKVRVTVEVVGKGKF---KGVGRSYR 247
Query: 1376 TAKKVACKEVLKSLRAS 1392
AK A + L+SL+A+
Sbjct: 248 IAKSAAARRALRSLKAN 264
>gi|115468004|ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|75254269|sp|Q69KJ0.1|RTL3_ORYSJ RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3
gi|51091751|dbj|BAD36550.1| CAF protein-like [Oryza sativa Japonica Group]
gi|113595641|dbj|BAF19515.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|125597181|gb|EAZ36961.1| hypothetical protein OsJ_21299 [Oryza sativa Japonica Group]
Length = 299
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 137/245 (55%), Gaps = 8/245 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 1208
V +ESLL Y FRD +L+ EALTHGS+ P P Y+RLE+LGDAVL +++ ++
Sbjct: 38 EVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLT 97
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
Y L PG LT +R+A+V+ + A +V HGLH + H + L +I D E+LS+
Sbjct: 98 YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQIT---DFIEELSMYP 154
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+ PK L D++ESL GAI+ DS N+E+V+Q + L +P+I+ ET+ HPV E
Sbjct: 155 IHS-NGLLDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSE 213
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
L E+CQK +K + +TVEV +G + K+ A+ A K L
Sbjct: 214 LFEFCQKTRRGVK---IVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDK 270
Query: 1389 LRASF 1393
L+ +
Sbjct: 271 LKETL 275
>gi|164424566|ref|XP_963538.2| hypothetical protein NCU06766 [Neurospora crassa OR74A]
gi|157070568|gb|EAA34302.2| predicted protein [Neurospora crassa OR74A]
Length = 1421
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 181/671 (26%), Positives = 292/671 (43%), Gaps = 85/671 (12%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
++VS AR YQLE E +LKQN I+F S + ++A + + S +
Sbjct: 61 DQVSTPAALTARAYQLEMFEASLKQNIILF----SDRVMVA------DGHWQWQDSGRIW 110
Query: 72 VFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQI 129
FL P V L QQ ++ +K G GVD W + A W + ++V T QI
Sbjct: 111 -FLTPTVALARQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQI 169
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L D S+ +L+ + ++++DE H+ G H A +MTE Y + G +P I G+TAS
Sbjct: 170 LFDANAHSFVRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAG-LPVPSILGLTAS 228
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNS--KVYTCASESVLS--NFIPFSTAKFKFYKYDEI 245
P+KS + I LE ++++ + T E +L+ N + D
Sbjct: 229 PLKS-------NNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPT 281
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSEL-GVW- 302
P L T + A L ++ + L L + E R+K+ + I EL GV+
Sbjct: 282 PTDLMTRFLE--AYHRLDISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYN 339
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSK-- 360
AL I + +D++ + + S L P IG+ +
Sbjct: 340 RALLVRREIGPWAADYY------------LTRTVSHMLAELERGEPPAQHRYIGEALRSI 387
Query: 361 ----FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLLSELLPRHC 415
+ + L+ K+ L++ L ++ +D I+FV ERV+ +IV + ++ H
Sbjct: 388 PIPAISKEPIQLSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIV-----THIISTHP 440
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFRRGLVNVIVATSILEEGLDVQ 465
K +Y + G K +N + +E FR G N++VATS+LEEG+DV
Sbjct: 441 LTKDRYRTASMIGTASVPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVP 500
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
CNLVI FD + SFIQ RGRAR +S LMV++ S + + N L K R E
Sbjct: 501 ICNLVICFDEPSNIKSFIQRRGRAREVSSTLYLMVQNASSESATDWHN-LERLMKERYED 559
Query: 526 LSHASLPCSPLNNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPS-------DGYF 577
+ L++ G VESTG T+ + S + +C+++ S + YF
Sbjct: 560 EMRQNAELELLDDPRIGSYPVLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYF 619
Query: 578 -----KPTPKFHINKEMGICTLYLPNNCPI-----QTVIAQGNIKTLKQAACLEACKKLH 627
P P + + T++LP + +++ + K A +A K L+
Sbjct: 620 VIRQVNPDPASPGRRTLLQATVHLPASLAPDLRRHESLWTWTSEKLAIMDASFQAYKALY 679
Query: 628 QIGALTDNLLP 638
G + +NLLP
Sbjct: 680 NAGLVNENLLP 690
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL 1080
N+HE LLS K+++++N LC+ + L +I S K W + +D +
Sbjct: 909 NHHERLLSQWKDKLVNNVRLCRASRDFGLDEYI-INSAASKKW--------RPKFVEDYM 959
Query: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG-----ENVGLIFLDRIGIKVDFVNV 1135
+ +++ SK VADVVE+LIGA GG E V L+ + + +
Sbjct: 960 DEMKSPISAETRQMSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEI 1019
Query: 1136 PYQRQ--FQVHAERLVNVRHLESL---LNYSFRDPSLLVEALTHGSYM-LPEIPRCYQRL 1189
R F+ + + + LE L ++Y+F SLL+EA+TH S L CY+RL
Sbjct: 1020 ELSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERL 1079
Query: 1190 EFLGDAVLDYLITVYL 1205
EFLGDA+LD ++ L
Sbjct: 1080 EFLGDAILDVIVVKRL 1095
>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
Length = 1404
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 162/345 (46%), Gaps = 37/345 (10%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
E LE LGD FLK A S LF ++ E V + +I N L ++++ +IR+
Sbjct: 959 ERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVKKEIYKYIRSR 1018
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNG----RKIYVTGRKKVKSKTVADVVEALIGAFLS 1112
F W G L G RK + + KT+ADV EALIGA L
Sbjct: 1019 GFSRHTWYPEGLK----------LLQGKDHSRKATTESKHALAEKTIADVCEALIGASLL 1068
Query: 1113 TGGE---------------NVGLIFLDRIGIKVDFVNVP-YQRQFQVHAERLVNVRHLES 1156
+GG N +R + +P YQR+ AE + R +E
Sbjct: 1069 SGGPEHRFDMAVKAVTTLVNSPSHMAERWKDYISLYTIPKYQRRAADGAE-IHLCRKVEE 1127
Query: 1157 LLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
L+Y FR P+LL A TH SY ++P CYQRLEFLGD+++D + L+ +YP P
Sbjct: 1128 KLSYRFRYPTLLGSAFTHPSYPSAWAKVP-CYQRLEFLGDSLIDMVCVEDLFARYPDRDP 1186
Query: 1215 GYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI---TVDSFEKLSLGSTFG 1271
+LT+ + A V+N +VK GLH H+ + S L +I + + E S +
Sbjct: 1187 QWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEGESESAVDY 1246
Query: 1272 WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
W PK L D++E+ GA+FVDSG N EV+ + R ++P
Sbjct: 1247 WTVTKDPPKCLPDMVEAYVGAVFVDSGFNFEVIEEFFRDHIKPFF 1291
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 121/216 (56%), Gaps = 19/216 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK--------PSPFVAVFL 74
R YQLE E A QNTI L+TGSGKTLIA++LL+ + L K +A FL
Sbjct: 111 REYQLELFERAKAQNTIAVLDTGSGKTLIAVLLLK---HTLEKELNDRAEGKQHRIAFFL 167
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
V V L QQA ++ + D VG ++G MG D W + W++ K+ V+V T +IL L
Sbjct: 168 VDSVTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWEQHFQKNMVIVCTAEILNQCL 227
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
SY K++ I +LI DE HH + H YA I+ E Y LE S PRIFGMTASPI +K
Sbjct: 228 LNSYVKMSQINLLIFDEAHHTKKDHPYARIIRESY---LEEDPSKRPRIFGMTASPIDTK 284
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI 230
D + LE L++S++ T ++ S+L +
Sbjct: 285 -----GDIVDEATRLEKLLDSRIATTSNMSLLRQVV 315
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 42/299 (14%)
Query: 366 GLLTEKIVCLIESLLEYRG-VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI-- 422
G L+ K+ L E L Y G + +CI+F ++ TA++L L T +I
Sbjct: 413 GQLSPKVQVLREELAHYFGRPTETKCIVFTQKRYTALILSELFQ-------TLNIPFIRP 465
Query: 423 -------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+G+ +G+ R++ +V+ FR G +N + ATS+ EEGLD+ CNLV+ FD
Sbjct: 466 GVLIGVRSGDLAGMNITFRQQFISLVK-FRTGEINCLFATSVAEEGLDIPDCNLVVRFDL 524
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP 535
+T+ ++QSRGRAR NS Y MV+ G+ + RL + KM + +LP
Sbjct: 525 YQTLIQYVQSRGRARHFNSTYASMVERGNLDHEQRLLE-VQDAEKMMQNFCR--TLPEDR 581
Query: 536 LNNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
L +YG D + ++STG T S+ +++ Y S L +
Sbjct: 582 L---LYGIDHDLDTVLQKDEGNRTFKIKSTGAKLTYHSATAILARYASSLQYEKEISAQV 638
Query: 582 KFHINKEMG--ICTLYLPNNCPIQTVIAQGNIKT--LKQAACLEACKKLHQIGALTDNL 636
+ + G +C + LP PI+ + +K K++A + C L + L D+
Sbjct: 639 TYVVLPINGAFVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHF 697
>gi|299754132|ref|XP_002911949.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
gi|298410618|gb|EFI28455.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
Length = 1457
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 228/487 (46%), Gaps = 49/487 (10%)
Query: 920 SFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI 979
++ LP + CR++ P SLS +F +P++ ++ + A + L +P I
Sbjct: 905 TYILPRDCCRVLHFPTSLSN--TFRVLPALCRKITDIYRARVARIAL--------RLPFI 954
Query: 980 K---VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
+ ++E++T F + LETLGD+ L+ + LF Y N HEG L+ + +S
Sbjct: 955 EDKILIESLTIPAALLAFSNQRLETLGDAVLQLCTTVHLFNQYPNRHEGQLTTLRRATVS 1014
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L + E L +I E W Y L +D+ + + R V
Sbjct: 1015 NKFLLQRALEMGLEEYITVEIASVARW--------RYILGEDADTAPPR---SVRTLVPR 1063
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRH--- 1153
+++ D +EAL+GA GG + L +G++ +P++ +++ V H
Sbjct: 1064 RSLQDCMEALLGASFLQGGIPMALQAGPSLGVEFGG-PLPWEMRYERKGPAEVATTHLFD 1122
Query: 1154 -LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
L+ L Y+F S+LVEA+TH S+ + P YQRLEFLGDA+LD ++ YLY K+P
Sbjct: 1123 TLQERLGYTFHSNSILVEAVTHPSFAT-DGP-SYQRLEFLGDAILDLVVVHYLYEKFPEA 1180
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTFG 1271
+ L+ +R+ + A ++K G+HK +L + LY+ I V FE ++
Sbjct: 1181 NSHQLSLLRAKVICAPTLAYLAIKELGVHKILLINNMGLYRAIEAYVPVFEDITDEEIAR 1240
Query: 1272 WESVTSFPKALGDIIESLAGAIFVDSGCNRE----VVFQSIRPLLEPMITPETMRFHPVR 1327
PKA+ D+ ESL GA+ VDSG N + VV + +L+ + M PV
Sbjct: 1241 SYYKFDPPKAISDVFESLVGAVLVDSGYNYDKTSAVVLDIMSKVLDQLSL--DMAKDPVS 1298
Query: 1328 ELTEY-----CQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
L E+ C++ FS + + + A V +EV +G+ + + AK +A
Sbjct: 1299 LLLEWVAQHGCREISFSKNR----KFNYDAGVVLEV--HGKQVVGPIVASSPGVAKFIAS 1352
Query: 1383 KEVLKSL 1389
+ L L
Sbjct: 1353 ERALSIL 1359
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 101/181 (55%), Gaps = 4/181 (2%)
Query: 10 TTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T S T AR YQ E A K N I +L TG GKTLI+++L+R + K
Sbjct: 7 TNPPKSTATGEVARKYQEEIFRQAQKGNVIAYLRTGLGKTLISVLLMR-WMCTQEKAKDK 65
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
+FLVPKV LV QQA I T L+ K G + + F D WK+ + H+V V TPQ+
Sbjct: 66 AIIFLVPKVALVEQQANYIHKQTGLRTCKIHGALNLSFADRDGWKKRFADHDVFVTTPQM 125
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L+ + + +K+ ++I DECHHAR H Y IM E++ ++ ++ P+IFGMTAS
Sbjct: 126 FLEAITHAVWKIEQCSLIIFDECHHARKNHPYNGIMREYFQ--VQPLNAR-PKIFGMTAS 182
Query: 190 P 190
P
Sbjct: 183 P 183
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 29/274 (10%)
Query: 388 IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC----QSRKKQNEIVEE 443
I+ IIFVE+ TA L +L + K Y+ G+ + + RK + + ++
Sbjct: 386 IQMIIFVEQRQTAACLAQVLEVIPELKGLAKCGYLMGHGTAGDITRRDEERKSKADPIKL 445
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
FR +N+++ATS+ EEGLD +C LVI FDP + + ++QSRGRAR + S Y++M++
Sbjct: 446 FREKEINILIATSVAEEGLDFPACELVIRFDPPKHLVGYVQSRGRARSKVSKYIVMIQQE 505
Query: 504 DSTTQSRLENY--LASGNKMRKEVLSHASLPCSPLNNHMYGEDF----------YHVEST 551
D+ +LE Y L G + + ++P ++ MY +D + V ST
Sbjct: 506 DT---DQLERYQALQRGELELSKTYHNRTMPERDESDTMYDDDTHPMDLAERERFVVPST 562
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKP-TPKFHINKEMGICTLYLPNNCPIQT--VIAQ 608
G + T +++SLI C+ +P D + + P+F + + + LP + P+Q ++
Sbjct: 563 GAVLTYDNALSLINHLCALIPRDSFTEAYKPQFIGDFQ---SRMRLPASLPLQPRDLVYL 619
Query: 609 GNIKTLKQAA----CLEACKKLHQIGALTDNLLP 638
G K KQ A +A K+L ++ D LLP
Sbjct: 620 GYPKRSKQEAKRSVAFQAVKRLLKLNVFDDYLLP 653
>gi|157120736|ref|XP_001659747.1| dicer-1 [Aedes aegypti]
gi|108883036|gb|EAT47261.1| AAEL001612-PA [Aedes aegypti]
Length = 2193
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 166/352 (47%), Gaps = 62/352 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-DFVNVPYQ----------RQFQ 1142
+ K+VAD VEALIGA+L G L+ + +GI+V VPY ++++
Sbjct: 1840 IPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKVPGSSQRYE 1899
Query: 1143 VHAERLVNV----------------------RHL-------ESLLNYSFRDPSLLVEALT 1173
+ +V HL E L Y F D S L++A+T
Sbjct: 1900 KDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFEDSLGYQFTDRSYLLQAMT 1959
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
H SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A
Sbjct: 1960 HASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASL 2019
Query: 1234 SVKHGLHKHILHASHELYKRIN-----------ITVDSFEKLSLGSTFGWESVTSFPKAL 1282
+V+H HK+ H S L I+ I + + +S E V PKAL
Sbjct: 2020 AVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLISEDECDEAEDV-EVPKAL 2078
Query: 1283 GDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSM 1340
GD+ ES+AGAIF+DS + + V++ R ++ P I ++ P+REL E +
Sbjct: 2079 GDVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPKSPIRELLE-LEPETAKF 2137
Query: 1341 KKPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
KP + VTVEV G TF + + + AK A K L+ L+
Sbjct: 2138 GKPEKLADGRRVRVTVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2184
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + +S
Sbjct: 1654 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVS 1712
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG + L + F+P W+ P
Sbjct: 1713 NLNLYRLGRRKVLGESMIATKFEPHDNWLPP 1743
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E L +A ++N I+ L S K IA+ L+ LRKP+ + + +
Sbjct: 17 RDYQVELLASAKERNLILCLAHNSSKEFIALKLIHELGSQLRKPAGKRK-----RTIYIS 71
Query: 83 QQAEA---IKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
Q I+ TDLKV D+ D + W++ + ++V++ + LD + Y
Sbjct: 72 QNDSVFNLIRDLTDLKVINV-NDLE-DADEDYDWEQIVDDYQVIITDERKCLDAIICGYL 129
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
LN + +L++D+CH G + + + ++Y+ E P+I G+ A P+
Sbjct: 130 DLNEVNLLVIDDCHKVYGNEEISKLFIDYYNVCREK-----PKILGL-AGPL 175
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR N+++ TS+LEEG+D+ CNLVI ++ + S++Q +GRAR +
Sbjct: 550 RKQEEVLKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARASTA 609
Query: 495 DYLLMV 500
++L V
Sbjct: 610 YHILFV 615
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 33/147 (22%)
Query: 535 PLNNHMYGEDFYH----------VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH 584
P +N Y + F H + LS+++ ++ YC++LPSD + K TP +
Sbjct: 725 PESNQQYADCFSHYLEPYRPLPETDENSNSVRLSNAIQMVNKYCAKLPSDTFTKLTPLWR 784
Query: 585 INK------EMGICTLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDN 635
K E+ CT+ +P N P++ I + T ++ A AC+ LH+ G L D+
Sbjct: 785 GAKTVRNGQELYQCTIRMPINSPLKEDIVGLPMPTEILARRMAAYTACRVLHKAGELDDS 844
Query: 636 LLP--------------DIVVEKHDAQ 648
L P D +E +DAQ
Sbjct: 845 LQPIGKESFRAFEADWEDFELESNDAQ 871
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
+L N+ PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1645 NLNNHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEG 1701
Query: 1216 YLTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1702 KLSHLRSKQVSN 1713
>gi|167046024|gb|ABZ10543.1| dicer-like protein C [Trichoplax adhaerens]
Length = 358
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 174/358 (48%), Gaps = 50/358 (13%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+LEA+T + ++D LE LE LGDSFLK+ + LF ++ HEG L+ + +I+ N L
Sbjct: 1 LLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNL 60
Query: 1041 CKLGCEQKLPGFIRTESFD---PKMWIIPGDNSGSYELND-----DSLFNGRKIYVTGRK 1092
KLG + +I + F+ + WI PG S ++ + S +G K +
Sbjct: 61 LKLGKSTPICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDK--AVTHQ 118
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-------------NVPYQR 1139
K SK++ADV++A++ A L E F+ + + F N+
Sbjct: 119 KFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDNISSNE 178
Query: 1140 QFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLD 1198
+++ N+ LE ++ YSF++ ++ ALTH SY +I Q+LEFLGD +L
Sbjct: 179 INKIYETN--NLERLEKVIGYSFQNKLFMIRALTHSSYHHHDIAIESNQKLEFLGDTILQ 236
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV 1258
Y+I + +N +P P L D + A VNN C A+ + G+ K++ S +L++ I
Sbjct: 237 YIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQESPDLFRDI---- 292
Query: 1259 DSFEKL------------------SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
D F K+ +L F E PK + D++E+L GAI++D+G
Sbjct: 293 DQFAKIITCDYMIDDEMNYNDRTEALFENFTEE--VKIPKPVSDVVEALIGAIYIDTG 348
Score = 48.1 bits (113), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
+ LE LGD+ L+Y ++ F ++ + L +E I++N L +G + ++ E
Sbjct: 225 QKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQE 284
Query: 1057 S------FDPKMWIIPGDNSGSYELNDDSLFNGR--KIYVTGRKKVK-SKTVADVVEALI 1107
S D II D Y ++D+ +N R ++ ++VK K V+DVVEALI
Sbjct: 285 SPDLFRDIDQFAKIITCD----YMIDDEMNYNDRTEALFENFTEEVKIPKPVSDVVEALI 340
Query: 1108 GAFLSTGGENVG 1119
GA GE++
Sbjct: 341 GAIYIDTGESIA 352
>gi|357118011|ref|XP_003560753.1| PREDICTED: ribonuclease 3-like protein 3-like [Brachypodium
distachyon]
Length = 296
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 137/246 (55%), Gaps = 9/246 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP--RCYQRLEFLGDAVLDYLITVYLYN 1207
+V +E+LL Y F D SL+ EALTHGSY P P Y+RLE+LGD VL L++ ++
Sbjct: 37 DVAAVETLLGYEFGDKSLVGEALTHGSYYYPYPPGDSTYERLEYLGDGVLTCLMSREVFL 96
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
Y L PG LT +R+A+V+ + A +V+HG+H+ + H + +L +I D F K
Sbjct: 97 TYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLRHKAPQLDGQI----DDFIKELCK 152
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR 1327
+ + PK L DI+ESL GAI++DS N+EVV++ R L +P+I+ ET+ HPV
Sbjct: 153 YKYHSNGLLDAPKVLSDIVESLIGAIYLDSNFNQEVVWRVFRNLADPLISLETLGKHPVS 212
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
EL E+CQK ++ + + V+V +G L K+ A+ A K L
Sbjct: 213 ELLEFCQKTRRGLQ---FVKDGWDKHLKVDVLVDGELLGTATYAQKKEIAQNRAAKAALD 269
Query: 1388 SLRASF 1393
L+ +
Sbjct: 270 KLKETL 275
>gi|242018047|ref|XP_002429494.1| dicer-1, putative [Pediculus humanus corporis]
gi|212514432|gb|EEB16756.1| dicer-1, putative [Pediculus humanus corporis]
Length = 2179
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 164/361 (45%), Gaps = 76/361 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF-----------Q 1142
+ K++AD VEALIGA+L G L+F+ +GIKV +P + +F
Sbjct: 1813 IPDKSIADCVEALIGAYLVACGPRGALLFMSWLGIKV----LPKEEKFFESENDPDIKKG 1868
Query: 1143 VHAERLVNVR---------------------------HLESLL----------NYSFRDP 1165
V A R + V LE LL Y FRD
Sbjct: 1869 VGASRPIKVMTNNGEVTFGKLKSPKRPLICHIPNPEGELEKLLRGFDIFEESIKYRFRDR 1928
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++ALTH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1929 SYLLQALTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRHHSPGALTDLRSALV 1988
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG-------------- 1271
NN +A +V+H HK+ H L +N VD F + +
Sbjct: 1989 NNTIFASLAVRHDFHKYFRH----LCPSLNEVVDRFVRFQQANGHAISEEFYLIEEEECE 2044
Query: 1272 WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVREL 1329
PKALGD+ ES+AGAIF+DSG + + V++ +++ I + P+REL
Sbjct: 2045 EAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRIMKNEIELFSTNVPKSPIREL 2104
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E + KP + V+VEV G +F + + + AK A K LK L
Sbjct: 2105 FEL-EPETAQFGKPEKLADGRRVRVSVEVFGKG-IFNG--IGRNYRIAKCTAAKCALKQL 2160
Query: 1390 R 1390
+
Sbjct: 2161 K 2161
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 47/283 (16%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWK--------TKYIAGNNS--GIQCQSRKKQNEI 440
+IFVE+ TA VL +L++L + K + G G + + RK Q +
Sbjct: 595 LIFVEKKFTAKVLFHVLNDLKQADEDFSFLNVQFTVGKVVDGTKDPKGAENEHRK-QELM 653
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
++ FR N+++ TS LEEG+++ CNLVI FD + S+I ++ RAR NS + L+V
Sbjct: 654 LKRFRIRACNLLIGTSFLEEGIELPKCNLVIRFDVPKHYRSYINTKERARAANSLFCLLV 713
Query: 501 --KSGDSTTQSRLENYLASGNKMRK--------------EVLSHASLPCSPLNNHMYGED 544
D + Y + K ++ + P PL +
Sbjct: 714 GPNEKDDFVHELAKYYETEAVLLEKCGHLEPEEEEENEADLYTQLVQPFCPL----LKRE 769
Query: 545 FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN------KEMGICTLYLPN 598
HV+ LSS+V L+ YC++LPSD + + TP +I ++M +CT+ LP
Sbjct: 770 CPHVD-------LSSAVMLLNRYCAKLPSDTFTRLTPICNIKTVKEFERKMYVCTIRLPI 822
Query: 599 NCPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
N PI+ I + T K+ A + C+ LH G L D L P
Sbjct: 823 NSPIKQEIEGCPMPTRVLAKRFAAFQCCQLLHLSGELDDTLQP 865
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ Y+N HEG LS + + +SN L
Sbjct: 1642 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRSKQVSNFNL 1701
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1702 YRLGRKKMLGESMVATKFEPHDNWLPP 1728
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1639 PSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRSKQ 1695
Query: 1225 VNN 1227
V+N
Sbjct: 1696 VSN 1698
>gi|320585938|gb|EFW98617.1| RNA helicase rnase [Grosmannia clavigera kw1407]
Length = 2671
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 237/535 (44%), Gaps = 77/535 (14%)
Query: 16 ADTLPFA-RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFL 74
AD L A R YQLE E +LK+N IV ++TG+GKT +AI+ +R+ L R P V FL
Sbjct: 68 ADALVAASRAYQLEMFEESLKKNIIVAMDTGTGKTRVAILRIRTE--LERSPLKIV-WFL 124
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKY-WGDMGVDFWDG-ATWKEEMSKHEVLVMTPQILLD 132
V L QQ +AI K G GVD W A W + ++V T Q+LLD
Sbjct: 125 ATTVFLCDQQFKAIVSQIPGAQAKIITGQSGVDAWSTQAVWDAVLLNVRIVVATHQVLLD 184
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ + K++ I +L DE H +H IM+EFY+ L G+ +P I GMTASP+
Sbjct: 185 AMHHGFVKISSISLLAFDEAHACVKEHAGKRIMSEFYYPALNRGEV-VPAILGMTASPVH 243
Query: 193 SKVSSSEQDYWQKIHDL---------ETLMNSK-----VYTCASESVLSNFIPFSTAKF- 237
Q +H + E + ++K + C + LS IP + A+
Sbjct: 244 GTKLDGLDKLEQTLHAVCRTPKRHRAELVAHTKQPSTSAHVCDPRAGLSAPIPQNAARLQ 303
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+ Y EI LA + ++++N + + + +
Sbjct: 304 QVYDAGEIRSFTENVLA---------YKGGEGDVEVNTKDYDRSWAFLKAFCRRTCHVYA 354
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV--------PS 349
ELG W A D++ + + +K G + + + ++ P+
Sbjct: 355 ELGSWSA------------DYYVHKVIRRCVNASNRKIGPEGRRPYLLFLLKQVRSVAPA 402
Query: 350 GAEWSIGDDSKFNLDS-GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS 408
+ D N+ L+ K++ L+E +LE I+FV+ A VL +LS
Sbjct: 403 KPVYDANADCSNNISFLSCLSAKVLKLVE-ILEACEARRPTGIVFVKERPMAAVLARVLS 461
Query: 409 ELLPR-HCTWKTKYIAGNN--------SGIQCQSRKKQNEIVEEFRRGL----------- 448
L PR H ++ ++ G + + + RK E ++ FR G
Sbjct: 462 -LHPRLHGRFRAGHVVGMSQMYTDVYEAALVLNPRKGSQEALQLFRGGAEAGEAGRGRRE 520
Query: 449 ---VNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+N++VATS++EEG+DV +CNLV+ D ++ ++IQ RGRAR +NS L++
Sbjct: 521 GSGINLLVATSVMEEGIDVPACNLVVCIDELTSLKAYIQRRGRAREENSQMHLLL 575
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 206/506 (40%), Gaps = 93/506 (18%)
Query: 910 QQKQKEPSKISFE--LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL--KNM 965
Q K SK F LP CR+ P++ F + +P +M L+ L+A L
Sbjct: 1009 QGGSKGESKRPFYTVLPAASCRVDRMPMAAVQFGAL--IPPLMQVLEVHLVAAELLSSTR 1066
Query: 966 LLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEG 1025
L + + + ++ + AI+ + + E LE +GD+ LK A+ + EG
Sbjct: 1067 LRELPVSDRSL----ITTAISAPAARLHDNYEVLEFIGDAVLKLMAAANCAAQNLDAPEG 1122
Query: 1026 LLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRK 1085
LS+ K+R+++N+ LC+ E L FI + + W ++ + G +
Sbjct: 1123 HLSLFKDRLVANSRLCRAATEFGLDRFIVGSQWSLREWR-------DVKIEAEEEKGGEQ 1175
Query: 1086 IYVTGRKKVKSKTVADVVEALIGAFLSTGG-------------ENVGLIFLDRIGIKVDF 1132
+ ++ +KT+ADVVEALIGA L GG E + L++ + F
Sbjct: 1176 LVMS------TKTLADVVEALIGAALVDGGLTRALECMRILLPERQPWLSLEKTRATL-F 1228
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
P Q +++ LE LL Y FR PSLL EA+TH S C +RLEF+
Sbjct: 1229 AAAPKQTTWRIPTT-------LEELLGYQFRRPSLLAEAMTHPSTPGIREGGCMERLEFI 1281
Query: 1193 GDAVLDYLITVYLYNKYPG----LSPGYLTDMRSASVNNDC-------YALSS------- 1234
GDAVLDY+I L G L + +R+ VN +++SS
Sbjct: 1282 GDAVLDYVIVQRLLGGKGGKRLDLEHQKMHLLRTTVVNAAFLGFAAMEFSISSEASTVTA 1341
Query: 1235 ----------------VKHGLHKHILHASHELYKRINITVDS-FEKLSLGSTFGWESVTS 1277
++HG + KR +S L GS + W +
Sbjct: 1342 DGTVTRGEIATPLWAFMRHGGSDEMARMQKAAQKRHAALRESVLAALWEGSEYPWVQLAQ 1401
Query: 1278 --FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQK 1335
K DI+E++ GA++VD+G + LLE M ++ R L E
Sbjct: 1402 LRLEKGFSDIVEAVIGAVWVDAGS-----LGPVEALLEKMGVLSYLQ----RALDEDV-- 1450
Query: 1336 NHFSMKKPVASRISGKAAVTVEVQAN 1361
H K RISG A + V A
Sbjct: 1451 -HLRHPKEELGRISGNARLHYRVAAG 1475
>gi|161783812|sp|Q7SCC1.3|DCL2_NEUCR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl-2; Includes: RecName:
Full=ATP-dependent helicase dcl-2
gi|18376024|emb|CAB91758.2| related to RNA helicase/RNAseIII CAF [Neurospora crassa]
Length = 1540
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 182/671 (27%), Positives = 292/671 (43%), Gaps = 83/671 (12%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
++VS AR YQLE E +LKQN IV L S + ++A + + S +
Sbjct: 61 DQVSTPAALTARAYQLEMFEASLKQNIIVAL--FSDRVMVA------DGHWQWQDSGRI- 111
Query: 72 VFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQI 129
FL P V L QQ ++ +K G GVD W + A W + ++V T QI
Sbjct: 112 WFLTPTVALARQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQI 171
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L D S+ +L+ + ++++DE H+ G H A +MTE Y + G +P I G+TAS
Sbjct: 172 LFDANAHSFVRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAG-LPVPSILGLTAS 230
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNS--KVYTCASESVLS--NFIPFSTAKFKFYKYDEI 245
P+KS + I LE ++++ + T E +L+ N + D
Sbjct: 231 PLKS-------NNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPT 283
Query: 246 PHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSEL-GVW- 302
P L T + A L ++ + L L + E R+K+ + I EL GV+
Sbjct: 284 PTDLMTRFLE--AYHRLDISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYN 341
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSK-- 360
AL I + +D++ + + S L P IG+ +
Sbjct: 342 RALLVRREIGPWAADYY------------LTRTVSHMLAELERGEPPAQHRYIGEALRSI 389
Query: 361 ----FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLLSELLPRHC 415
+ + L+ K+ L++ L ++ +D I+FV ERV+ +IV + ++ H
Sbjct: 390 PIPAISKEPIQLSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIV-----THIISTHP 442
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFRRGLVNVIVATSILEEGLDVQ 465
K +Y + G K +N + +E FR G N++VATS+LEEG+DV
Sbjct: 443 LTKDRYRTASMIGTASVPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVP 502
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
CNLVI FD + SFIQ RGRAR +S LMV++ S + + N L K R E
Sbjct: 503 ICNLVICFDEPSNIKSFIQRRGRAREVSSTLYLMVQNASSESATDWHN-LERLMKERYED 561
Query: 526 LSHASLPCSPLNNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPS-------DGYF 577
+ L++ G VESTG T+ + S + +C+++ S + YF
Sbjct: 562 EMRQNAELELLDDPRIGSYPVLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYF 621
Query: 578 -----KPTPKFHINKEMGICTLYLPNNCPI-----QTVIAQGNIKTLKQAACLEACKKLH 627
P P + + T++LP + +++ + K A +A K L+
Sbjct: 622 VIRQVNPDPASPGRRTLLQATVHLPASLAPDLRRHESLWTWTSEKLAIMDASFQAYKALY 681
Query: 628 QIGALTDNLLP 638
G + +NLLP
Sbjct: 682 NAGLVNENLLP 692
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 29/277 (10%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+P+ ++ L+A +L L C+Q +P I A+ + + + E LE +GD+
Sbjct: 950 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPLITT--ALISSGSRGPTNYERLEFIGDT 1006
Query: 1006 FLKYAA--SQQLFKTYQ----NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD 1059
LK+ A + + N+HE LLS K+++++N LC+ + L +I S
Sbjct: 1007 ILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYI-INSAA 1065
Query: 1060 PKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG---- 1115
K W + +D + + +++ SK VADVVE+LIGA GG
Sbjct: 1066 SKKW--------RPKFVEDYMDEMKSPISAETRQMSSKMVADVVESLIGAAYMCGGMSKA 1117
Query: 1116 -ENVGLIFLDRIGIKVDFVNVPYQRQ--FQVHAERLVNVRHLESL---LNYSFRDPSLLV 1169
E V L+ + + + R F+ + + + LE L ++Y+F SLL+
Sbjct: 1118 LECVALLLPTPKSSQFKWQEIELSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLI 1177
Query: 1170 EALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYL 1205
EA+TH S L CY+RLEFLGDA+LD ++ L
Sbjct: 1178 EAMTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRL 1214
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 1183 PRCYQRLEFLGDAVLDYL--ITVYLYNKYPGLSPGY----LTDMRSASVNNDCYALSSVK 1236
P Y+RLEF+GD +L + +T + + + P + L+ + VNN +S
Sbjct: 994 PTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRD 1053
Query: 1237 HGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
GL ++I++++ R D +++ S E+ K + D++ESL GA ++
Sbjct: 1054 FGLDEYIINSAASKKWRPKFVEDYMDEMK--SPISAETRQMSSKMVADVVESLIGAAYMC 1111
Query: 1297 SGCNR 1301
G ++
Sbjct: 1112 GGMSK 1116
>gi|125555283|gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indica Group]
Length = 276
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 137/245 (55%), Gaps = 8/245 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 1208
V +ESLL Y FRD +L+ +ALTHGS+ P P Y+RLE+LGDAVL +++ ++
Sbjct: 38 EVAAVESLLGYEFRDKALVEQALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLT 97
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
Y L PG LT +R+A+V+ + A +V HGLH + H + L +I D E+LS+
Sbjct: 98 YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQIT---DFIEELSMYP 154
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+ PK L D++ESL GAI+ DS N+E+V+Q + L +P+I+ ET+ HPV E
Sbjct: 155 IHS-NGLLDPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSE 213
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
L E+CQK +K + +TVEV +G + K+ A+ A K L
Sbjct: 214 LFEFCQKTRRGVK---IVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDK 270
Query: 1389 LRASF 1393
L+ +
Sbjct: 271 LKETL 275
>gi|307195788|gb|EFN77602.1| Endoribonuclease Dcr-1 [Harpegnathos saltator]
Length = 1807
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 160/357 (44%), Gaps = 64/357 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI------KVDFVN-----------VP 1136
+ K++AD VEALIGA+L G L+F+ +GI +V V+ +P
Sbjct: 1445 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEVQIVSEDEPEERIPGSIP 1504
Query: 1137 YQRQFQVHAE-------------------------------RLVNVRHLESLLNYSFRDP 1165
Y ++ H E L LE + Y FRD
Sbjct: 1505 YVKETSEHGEIVWTQIRYGKLEEPQNPLLRYIPDPEGELCMMLDGYEELEKSIGYKFRDS 1564
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1565 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALV 1624
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTF--------GWESV 1275
NN +A +V+ G HK+ H S L IN + + S+ +
Sbjct: 1625 NNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGKEECEEAED 1684
Query: 1276 TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEYC 1333
PKALGD+ ESLAGAI++DSG + + V+ +++ I + P+REL E
Sbjct: 1685 VEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLE-L 1743
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ KP + VTV+V G + + + AK A K LK L+
Sbjct: 1744 EPETAKFGKPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRIAKCTAAKCALKKLK 1797
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR N+++ATSILEEG+D+ CN V+ +D + S++Q + RAR ++
Sbjct: 347 RKQEEVLKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYVQCKSRARAIDA 406
Query: 495 DYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS--------PLNNHMYGEDFY 546
++L+V S L LA + K +L L CS MY
Sbjct: 407 LHVLLVPQKIS---KELIWQLAQYQYIEKTLL----LKCSNKELTEKEETGADMYAAMIP 459
Query: 547 HVE----STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK------EMGICTLYL 596
H + T +S++SL+ YC++LPSD + + TP++ I M C+L L
Sbjct: 460 HYKPLDGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIETVNINEVTMYTCSLRL 519
Query: 597 PNNCPIQTVIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
P N P++ V+ N ++ A L+ C LH+ + DNLLP
Sbjct: 520 PINSPMKYVVTSYPMPNRAMARRMAALQLCIDLHRGNEIDDNLLP 564
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1275 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1334
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1335 YRLGRQKMLGESMIATKFEPHDNWLPP 1361
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1272 PSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1328
Query: 1225 VNN 1227
V+N
Sbjct: 1329 VSN 1331
Score = 41.2 bits (95), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKVV 79
R YQ+E L A ++N I+ L +T I I L++ +A R+ A++++
Sbjct: 17 REYQVELLYAAKEKNIIICLGKNFEQTFIVIKLIQEFATNNRRLISKGGKRAIYILNNED 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+A IK TDLKV + DF E VLV TP++ +
Sbjct: 77 KCVIKATYIKQLTDLKV-LVCDSVPEDF------AESFESSHVLVGTPKVYTQLISEKKL 129
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
I ++I+DECH + I+ F LL +N+PRI G+
Sbjct: 130 LPCHINLVIVDECHKSNEDSNLKFILQTF---LL---CNNVPRIIGLA 171
>gi|357462175|ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 565
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 9/240 (3%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E++L Y F++ LL EA THG+Y E Y+RLE++GD+VL+ +IT + YP
Sbjct: 227 LHEVEAILEYEFKNKLLLEEAFTHGTYGA-ENGLSYERLEYVGDSVLNLMITKEQFQAYP 285
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
L+PG+LT +R+A+V+ + A ++KHGLH+++ H L +I + L S
Sbjct: 286 TLAPGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEFTKGIAEYPLHSN- 344
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELT 1330
+ PK+L DI+ES GAIFVD G + E V++ + LLEP+I P T++ HPV EL
Sbjct: 345 ---GLIDVPKSLADIVESTIGAIFVDCGSSVETVWKVFKKLLEPIIDPNTIQRHPVTELH 401
Query: 1331 EYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
E CQK ++ R K + +EV N + K+ A A K L+++
Sbjct: 402 EVCQKKSLKLQ----FRDLWKETMRIEVLINEEFVGSGVYGSKKEIAHNRAAKNALENME 457
>gi|449493233|ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 136/241 (56%), Gaps = 11/241 (4%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E++LNY FRD LL EA T SY PE ++RLE++GD+VL++LIT Y P LS
Sbjct: 37 IEAILNYEFRDKRLLEEAFTDASYS-PENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 95
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LT +R+A+V+ + A ++ HG H+++ H +L+++I S E+ L S
Sbjct: 96 PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN---- 151
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
+ PK L DI+ES GA+F DS + + V++ + L+EP+IT +TM+ HP+ ELTE C
Sbjct: 152 GMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKELMEPLITLKTMKKHPMTELTEMC 210
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASF 1393
QK ++ + + V +E Q G+ K A+ A K L++L F
Sbjct: 211 QKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRK-----KLIAQNRAAKNALENLDTFF 265
Query: 1394 P 1394
P
Sbjct: 266 P 266
>gi|411170363|gb|AFW16070.1| dicer-1 [Nilaparvata lugens]
Length = 2239
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 159/348 (45%), Gaps = 55/348 (15%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---DFVNV--------------P 1136
+ K++AD VEALIGA+L G LIF+ +GIKV + V V P
Sbjct: 1883 IPDKSIADCVEALIGAYLIECGPRGALIFMSWLGIKVMPCEEVKVTDDTALERPVGSHLP 1942
Query: 1137 YQRQFQ-----VHAERLVNVRH-----------------LESLLNYSFRDPSLLVEALTH 1174
Q Q V R +RH LE L Y F D S L++A+TH
Sbjct: 1943 DQNNVQIRYGFVKPPRSPLLRHVSNPECELERLLAGFDVLERSLRYRFNDRSYLLQAMTH 2002
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDA LDYLIT +LY PG LTD+RSA VNN +A +
Sbjct: 2003 ASYHTNRLTDCYQRLEFLGDAALDYLITRHLYEDKRQHCPGDLTDLRSALVNNTIFASLA 2062
Query: 1235 VKHGLHKHILHASHELYKRINITVDSFEK----------LSLGSTFGWESVTSFPKALGD 1284
V+HG HK+ H S L + I V E+ L PKALGD
Sbjct: 2063 VRHGFHKYFCHLSPGLSEVIERFVRIQEENGHAISEECYLIGEEECEEAEDVEVPKALGD 2122
Query: 1285 IIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEYCQKNHFSMKK 1342
+ ES+AGAIF+DSG + + V+ +++ I + P+REL E + K
Sbjct: 2123 VFESVAGAIFLDSGMSLDAVWMVYYHMMKNEIDQFSTNVPKSPIRELLEL-EPETAKFGK 2181
Query: 1343 PVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
P + V VEV G + + + + AK A K LK L+
Sbjct: 2182 PEKLADGRRVRVNVEVFGKGT---YKGIGRNYRIAKCTAAKCALKQLK 2226
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 22/256 (8%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR NV+V TS+LE+G+D+ CNLV+ ++ S+ QS+GRAR +S
Sbjct: 762 RKQEEVLKRFRMRECNVLVGTSLLEDGIDLPKCNLVVRYNVPTNYRSYAQSKGRARAPDS 821
Query: 495 DYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH------- 547
Y+ +++ + LA ++ K +L S P + D Y+
Sbjct: 822 HYVHLIERENCDA---FITDLAQFMEIEKMLLRRCSNQ-EPSEDEEREADLYNDCVTPYK 877
Query: 548 -VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK------FHINKEMGICTLYLPNNC 600
+ + + T+++SV+ + YC++LPSD + + TP+ F ++M +CT+ LP N
Sbjct: 878 PKQDSESSVTMANSVASVNRYCAKLPSDTFTRLTPQATLRRIFFNEQDMYVCTIRLPINS 937
Query: 601 PIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNA 657
P++ I + T ++ A +EAC+ L++ L DNL P I E+ N A
Sbjct: 938 PVKQDIVGHPMPTRVLARRIAAMEACRTLYEARELDDNLQP-IGKERFQMLDSANAVEVA 996
Query: 658 EHPIYFPPELVNQSPQ 673
P PP+L + P+
Sbjct: 997 ADPDEPPPQLWDIEPR 1012
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA---VFLVPKVV 79
+ YQ+E L+ A +N IV + G KT IA+ L++ + RK V+L
Sbjct: 17 KEYQVELLDAAKNRNIIVCVGNGPNKTFIALKLIQELSNSSRKSVRKYGQRMVYLTATDT 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWG---DMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+V Q + TDL VG+Y D+ +D +++VLVMT + D ++
Sbjct: 77 VVSQMGVVFRNLTDLNVGEYISSEKDLDLD------------ENQVLVMTSEACWDFIQT 124
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
++ +LI+DECHH+ H +M +H L G+ + R+ G+T SPI
Sbjct: 125 GQLNFKIVNLLIVDECHHSIRDHPMKKVMEACWHVL---GNPEM-RVVGLT-SPI 174
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P++ +L+A+T + +LE LET+GDSFLK+A + L+ Y++ HEG LS + + +S
Sbjct: 1717 PSV-LLQALTMSNANDGINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLRSKQVS 1775
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG + + F+P W+ P
Sbjct: 1776 NLNLYRLGKHKIFGESMIATKFEPHDNWLPP 1806
Score = 40.8 bits (94), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PS+L++ALT + +RLE +GD+ L + IT YLY Y + G L+ +RS
Sbjct: 1717 PSVLLQALTMSN---ANDGINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLRSKQ 1773
Query: 1225 VNNDCYALSSVKHGLHK 1241
V+N L+ + G HK
Sbjct: 1774 VSN----LNLYRLGKHK 1786
>gi|256077012|ref|XP_002574802.1| ribonuclease III [Schistosoma mansoni]
Length = 907
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 166/332 (50%), Gaps = 29/332 (8%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTY-QNNHEGLLSVKKERIISNAA 1039
++E T ++ LE LE GDSFL + A+ ++ T Q+ EG LS K+ ++SNA
Sbjct: 532 LIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSNAH 591
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
LC + C+ K + ++F P +P Y + ++ ++Y ++ K++
Sbjct: 592 LCDIACDLKWYEYCTGQTFSPPEHFLPP----CYSVASEACKYDPRLYT----RLTDKSL 643
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLN 1159
AD+VEALIG FL G + L I + + QR FQ L+ L
Sbjct: 644 ADMVEALIGCFLLRSGLSAAFNLLHYFQICPEIILELNQRFFQ-----------LQEKLG 692
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
Y F+ LL EA+TH S + + YQRLEFLGD++L ++I+ YL+ K P SPG LT
Sbjct: 693 YYFKGIELLAEAMTHQSSINKQYWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTT 752
Query: 1220 MRSASVNNDCYALSSVKHGLHKHI------LHASHELYKRINITVDS-FEKLSLGSTFGW 1272
RS V+N A V+H ++ I L A + K I+ DS FE++ L +
Sbjct: 753 ARSTVVSNINLANVVVEHDIYPFIDFGNCSLKACIDDIKSIHRQTDSHFERIELITKKVS 812
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ K L D+ ES+ GAIFVDS N +V
Sbjct: 813 SGLNV--KVLADVFESILGAIFVDSNGNHQVA 842
>gi|397615349|gb|EJK63376.1| hypothetical protein THAOC_15968 [Thalassiosira oceanica]
Length = 1692
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 178/702 (25%), Positives = 291/702 (41%), Gaps = 139/702 (19%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY----------------------- 59
RNYQ+ LE + N IV L TG GKT+I+IML+R Y
Sbjct: 280 RNYQVHLLEKCKRSNVIVHLATGMGKTMISIMLIRDYLSKRQAASDTAPASTIETTLASG 339
Query: 60 --AYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM 117
+ R S +FLVP + L Q ++ ++ + + V A ++E+
Sbjct: 340 QEGLVSRVYSKRQILFLVPSIALCVQHSDTLRANLNCTVATACHTSS----HTARSRDEI 395
Query: 118 SKHEVLVMTPQILLDGLR--LSYFKLNMIKVLILDECHHARGK-HQYACIMTEFYHRLLE 174
S+ +V+V T D L+ L+ + ++++DE H+A K H YA IM FYH L
Sbjct: 396 SRSDVIVATHGTAKDLLQHYPDVLALSNLDLMVIDEAHYAGTKDHNYATIMKLFYH-TLP 454
Query: 175 TGDSNLPRIFGMTASP-IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFS 233
G P + G+TASP I +KVS + + K+ +LE ++SK++ E
Sbjct: 455 VGLR--PHVLGLTASPLINAKVSDTAERLQVKLGELERTLDSKLHGFPEELADCR----K 508
Query: 234 TAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLL 293
K +D + + T L E M L +R E L + QA + ++ ++
Sbjct: 509 DTKESIVYFDSLLDSFSTKLP-EPDMTFLHKSRRKE---LRQLQALCDDVGLQVTSTYII 564
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
L E+G E D EQ + + SQ ++ E
Sbjct: 565 ALLREIGR------------NEYDHETIEQFNDLKVYL--------SQVVIHLNRQVDEG 604
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQ--------- 404
GD S TEK+ L+ L++ +D ++FVER ITAI L
Sbjct: 605 DCGDFSGH-------TEKMSTLVGLLVDLLKHDDPVGVVFVERRITAIALSHYFNQNKPL 657
Query: 405 -----SLLSELLPRHCTWKTKYIAGNNSGIQ-------CQSRKKQNEIVEEFRRGLVNVI 452
+ S+ L R+ + KY++ ++S Q K+ ++ + R NV+
Sbjct: 658 DHLGVDIRSDSLVRNASKIFKYLSNSSSHDQQVVDQDFLHQTKRIRSVINKLRTRETNVL 717
Query: 453 VATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST------ 506
+ATS++EEG+DV++C+ +I FD +T+ S+IQ +GRAR + + + +V +S
Sbjct: 718 IATSVVEEGVDVEACSFIISFDRMKTIKSYIQMKGRARQKQASFYTLVDKCESQILDLPD 777
Query: 507 ---TQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTG----------T 553
T+ R+ +++AS + + S P N + + E +
Sbjct: 778 AQKTEKRIHDFVAS-----SQTAINLSQPLRDPANAYFDSPYSTEEEAAMHRGKYSTRIS 832
Query: 554 IATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGIC----------TLYLPNNCPIQ 603
A L S+ SL+ Y +P D P +KE +L LP++ P +
Sbjct: 833 FADLQSAKSLLNRYSMSVPID------PSSRSSKEAMTLHMPCYQERENSLSLPSHLPPE 886
Query: 604 TVIAQ-------GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
I N K L + +LH++G L D LLP
Sbjct: 887 FRIVSLPRELRGQNAKRKMNLLALASIVRLHKLGLLNDRLLP 928
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 206/488 (42%), Gaps = 55/488 (11%)
Query: 848 YCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSK 907
Y + G G+L + N T++ ++ E+YG+ L +R++ + + S
Sbjct: 1127 YIVYGPSGNLCRDGF---PNTEYTSFLHYFSEKYGVTTLCPTSKLFVAKRVWDMPHSHSV 1183
Query: 908 CRQQKQKE--PSKISFELPPELCRIIMAPIS-LSTFYSFTFVPSIMHRLQSLLLAVNLKN 964
+E + ELP E+C+ +P++ S T +P ++ ++ L A
Sbjct: 1184 LGPGAAEEDVAHAANLELPAEVCQ--ESPMADPSIVLQSTLLPQFLYLVERRLTA----E 1237
Query: 965 MLLDHCMQNVTI--------PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLF 1016
+ HC +N + V+E +TTK C+ E LE LGD+ LK + L
Sbjct: 1238 AFIRHCQENYEVLGECLSRAGPDSVMEVLTTKTCRMPQDYERLEWLGDAVLKLVQTDSLL 1297
Query: 1017 KTYQNN--HEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYE 1074
+ + HEG L + + + SN L ++ E FI + + + W +
Sbjct: 1298 QYSDTSYLHEGYLHMLRSVMGSNERLERVAEECGFNHFILSCPLNREEW---RPSRLQLR 1354
Query: 1075 LNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLIFLDRIGIKVDFV 1133
+DDS +G K ADVVEA++G F+ G + L+ I + FV
Sbjct: 1355 KHDDSSTKALPPTPSG------KVCADVVEAILGLIFVQFGFAKSVEVSLE---IGLTFV 1405
Query: 1134 NVP--YQRQFQVHAERLVNVRHLESLLNYS---FRDPSLLVEALTHGSYMLPEIPRCYQR 1188
N +R F E + L N++ DP LL EA+TH S + + R YQ
Sbjct: 1406 NADKLSRRDFWSALED--DGELLAFATNFTGQPISDPRLLHEAVTHPS-CVSKPCRSYQT 1462
Query: 1189 LEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASH 1248
LE+ GDA + +L++K LS L + S +N A +G+ + I H
Sbjct: 1463 LEWAGDAAVCLAARNWLFHKKEKLSVPTLVVLESTLTSNQSLAYIGHLNGVQRIIDHRMS 1522
Query: 1249 ELYKRINITVDSFEKLSLGSTFG-WESVTSFPKALGDIIESLAGAIFVDSG--CNREVVF 1305
EL R FE G W T PK + D++ESL GA+ VD G +E
Sbjct: 1523 ELPGR-------FESYKFQLRRGLW--ATDPPKVIPDVVESLIGAVHVDQGVEAGQEAAA 1573
Query: 1306 QSIRPLLE 1313
+RPLL+
Sbjct: 1574 YVLRPLLD 1581
>gi|449453708|ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 135/241 (56%), Gaps = 11/241 (4%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E++LNY FRD LL EA T SY PE ++RLE++GD+VL++LIT Y P LS
Sbjct: 37 IEAILNYEFRDKRLLEEAFTDASYS-PENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 95
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LT +R+A+V+ + A ++ HG H+++ H +L+++I S E+ L S
Sbjct: 96 PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN---- 151
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYC 1333
+ PK L DI+ES GA+F DS + V++ + L+EP+IT +TM+ HP+ ELTE C
Sbjct: 152 GMIKAPKVLADIVESTIGAVFADSNF-IDTVWKIFKELMEPLITLKTMKKHPMTELTEMC 210
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASF 1393
QK ++ + + V +E Q G+ K A+ A K L++L F
Sbjct: 211 QKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRK-----KLIAQNRAAKNALENLDTFF 265
Query: 1394 P 1394
P
Sbjct: 266 P 266
>gi|238499729|ref|XP_002381099.1| dicer-1, putative [Aspergillus flavus NRRL3357]
gi|220692852|gb|EED49198.1| dicer-1, putative [Aspergillus flavus NRRL3357]
Length = 605
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 186/420 (44%), Gaps = 60/420 (14%)
Query: 928 CRIIMAPISLSTF-----YSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL 982
C + + P+ +S S P+I++RL + L+A+ N L ++++ L
Sbjct: 78 CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIALEGCNTL------DLSVKPAYAL 131
Query: 983 EAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
EA T + H E LE LGD FLK A S LF ++ E
Sbjct: 132 EAFTKDSDNTEEHRVQQIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDFH 191
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR---- 1084
V + +I N L +++L +IR+ F W G +L +GR
Sbjct: 192 VNRMCLICNKNLFNTALKKELYQYIRSRGFSRHTWYPDGL----------TLLHGRDHRK 241
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFLSTGG-ENVGLIFLDRIGIKVDFVN--------- 1134
K+ + ++ KTVADV EALIGA L +GG N + + + VD N
Sbjct: 242 KVSAESKHALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADY 301
Query: 1135 -----VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQ 1187
+P + L R +E L Y F+ P LL A TH SY ++P CYQ
Sbjct: 302 TSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVP-CYQ 360
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGD++LD + L+ +YP P +LT+ + A +N +VK GLH H+ H S
Sbjct: 361 RLEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMASNKFLGALAVKLGLHTHLRHFS 420
Query: 1248 HELYKRIN---ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
+ L +I + + E S G+ W PK L D++E+ GA FVDS VV
Sbjct: 421 NPLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVV 480
>gi|359485630|ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
gi|297739192|emb|CBI28843.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
AE ++ +E +L YSF + LL EA TH S + Y+RLEF+GD+VL LIT
Sbjct: 24 AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQF--SYERLEFMGDSVLSLLITKE 81
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
+ YP L PG LT +RSA+V+ + A ++KHGLH+ + H ++ ++I ++ ++
Sbjct: 82 QFFLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEY 141
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFH 1324
L S PK L D++ES GA+FVD C+ + V++ + LLEPMI PET++ H
Sbjct: 142 PLHSN----GQIEVPKVLADVVESTIGAVFVDCNCSVDTVWKVFKGLLEPMIVPETLKVH 197
Query: 1325 PVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGR 1363
PV EL E CQK ++ + + G +E GR
Sbjct: 198 PVTELNERCQKRGLKLEFKDSWQRRGDIDFYIEDYFAGR 236
>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1635
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 165/654 (25%), Positives = 276/654 (42%), Gaps = 85/654 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
RNYQ E E +L++N IV L FL P V L
Sbjct: 17 RNYQTEMFEASLQENIIVAL----------------------------IWFLAPTVALCF 48
Query: 83 QQAEAI-KMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ + I K +K G V+ W + A W + +V+V T +L D + + +
Sbjct: 49 QQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSNGFVR 108
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++ + +LI DE HH +H IM +FYH L++ G +P I G+TASP+ S
Sbjct: 109 VSQLGLLIFDEAHHCMRRHPANRIMQDFYHPTLVKQGPDAVPGILGLTASPVVRTNS--- 165
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAM 259
Q++ +E+ MN+ C + + T + + P + + +
Sbjct: 166 ----QELSMIESNMNA---ICKTPRAHRQELLTHTHRPHLQQIWYTPVNIDDPTSGTRTL 218
Query: 260 IELKHTRSLENLDL-NEAQAELIRKKV---SKINSTLL----YCLSELGVWL--ALKAAE 309
L H + E +DL ++ + +R+ + LL YC L ++ + +
Sbjct: 219 RALIH--AWETIDLEDDPYVKQLRRSTFDGKALQKALLTRKTYCNESLRRFVERSCHIFQ 276
Query: 310 TISCYESDFFAWEQLDGFGETI-----IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLD 364
+ + D+F + E I + + ++ + L +++ + A +I D +
Sbjct: 277 ELGGWAVDYFIHASIRRLREKIDDSALMLDWDNEEKEYLASFLSNIA--TIQSDPPRRPE 334
Query: 365 SGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLPR---HCTWKTK 420
+ + K+ LI S L +IF ++ T VL +LLS L + C
Sbjct: 335 DFIPSPKLEALI-SFLSSTDDSTFSGLIFAKQRATVTVLATLLSVHPLTKDRFRCAAFVG 393
Query: 421 YIAGNNSGI---QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G N + S + Q + + EFR G N+IVAT +LEEG+D+ +C++VI +D
Sbjct: 394 WSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPA 453
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLN 537
V SF+Q RGRAR + S + ++ + D R L M + C L
Sbjct: 454 NVKSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEA--MIEAYQDDERKRCEALA 511
Query: 538 NHMYGE---DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI-----NKEM 589
E + + VESTG + T ++V+ ++ +CS LP Y P+ +
Sbjct: 512 LETMAEVVTERFEVESTGAVLTADTAVARLHHFCSILPQQPYVDNRPELSFEYDGTGRRR 571
Query: 590 GICTLYLPNNCPIQTVIAQG-NIKTLKQAACLEA----CKKLHQIGALTDNLLP 638
G T LP+ +G T ++AA EA CK+L++ G L D+LLP
Sbjct: 572 G--TFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGLLNDHLLP 623
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 211/493 (42%), Gaps = 74/493 (15%)
Query: 916 PSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT 975
P+K +P C I P + + F F+ +I+ RL++ L+A L +L Q+V
Sbjct: 850 PAKARI-IPATACTIDRLPFTDTIFG--LFISAILDRLEATLIATRLCETIL----QDVQ 902
Query: 976 IPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERI 1034
+ + V+ AI+ Q + E GDS LK+ S QL+ + N EG LS ++ I
Sbjct: 903 FSSTRHVITAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEI 962
Query: 1035 ISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKV 1094
+ N L + + L FI T F P+ W P L + + + V G++ +
Sbjct: 963 VQNNRLARAALDVGLDAFILTRRFTPRKWTAP-------------LISEKAVEVAGKRPL 1009
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDF--VNVPYQRQFQVHAERLVNVR 1152
SK +ADVVE+LIGA GG+ + R+ +++ + P + H V
Sbjct: 1010 SSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPITPPPVHESAPH----VMND 1065
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
L+ L Y+F + +LLVEALTH S + YQRLEFLGDAVLD ++ + +
Sbjct: 1066 SLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVHAMAHHAVEC 1125
Query: 1213 SPGYLTDMRSASVNNDC-------------------------YALSSVKHGLHKHILHAS 1247
G +T ++ A N + +AL S + + S
Sbjct: 1126 PQGEMTMIKHALTNANLLAFFCMEFVVAQEHTDVDAVPAAGGFALRSEQKPIELWRFMRS 1185
Query: 1248 HE----------LYKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFV 1295
L++ + + L G+ + W++++ K DI+ES+ GAIFV
Sbjct: 1186 EALDLNNARETVLHRHSQLRAEIVHALHHGAQYPWQALSQLNADKFFSDIVESILGAIFV 1245
Query: 1296 DSGCNREVVFQSIR-----PLLEPMITPETMRFHPVRELTEYCQKNH--FSMKKPVASRI 1348
DS + +V + P L ++ HP R + K F+ K+ V
Sbjct: 1246 DSRGDLDVCAMFVERIGLLPYLRRILADRVDVMHP-RHTAQRLSKGEALFTAKRVVDG-- 1302
Query: 1349 SGKAAVTVEVQAN 1361
SG A+ V+ N
Sbjct: 1303 SGNASYRCVVKRN 1315
>gi|116196272|ref|XP_001223948.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
gi|88180647|gb|EAQ88115.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
Length = 1476
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 179/661 (27%), Positives = 279/661 (42%), Gaps = 134/661 (20%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR-----SYAYLLRKPSPFVAVFLVPK 77
R+YQLE E A QNTI L+TGSGKTLIA +LLR ++ +A FLV K
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDM----GVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
V LV QQ + + D + K+ GDM DFW T+ E M+ +V T +IL
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDVTQDFWH-KTFDENMA----IVCTAEILYQC 250
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
L SY +++ MTASP+ +
Sbjct: 251 LTHSYIRMDQ-----------------------------------------AMTASPVDA 269
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
++ + +LE L++S++ T A + L N S+ K K +
Sbjct: 270 QIDPK----IARSPELEGLLHSQIATVADPTALHN----SSTKLK--------REVTVEY 313
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
L E R+L++L + L +K + + SELG W A +
Sbjct: 314 GKCLPEFETGLNRALKDL---VGEHRLFQKPFAFTAT----AASELGPWCADR------- 359
Query: 314 YESDFFAWEQ---LDGFGE-TIIKKFGSDASQALVTYVPSGAEWS--IGDDSKFNLDSGL 367
Y FF E+ L+ E I++K S SQ + V E +G + S L
Sbjct: 360 YWQLFFRGEEVVKLEAKTEREILRK--SAYSQEIAAQVNKVREAHRLVGQHEFASPSSDL 417
Query: 368 LTEKIVCLIESLL-EYRGVE-DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG- 424
L+ K+V L+ L E+RGV+ RCI+FV + A +L LL + R + + G
Sbjct: 418 LSSKVVILLRILRGEFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGLEPGILVGG 477
Query: 425 -------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+N+ + + + Q + +F++G +N I ATS+ EEGLD+ CN++I +D +
Sbjct: 478 GRPEASYDNAKV---TYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNN 534
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSP 535
T+ +IQSRGRAR + S Y+ MV+S + ++ S + +RK E L P
Sbjct: 535 TLIQYIQSRGRARQEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEAL--------P 586
Query: 536 LNNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
+ + G +F Y V TG S+ + + + LP T
Sbjct: 587 ADRKLTGNNFDMEYFLRKEKDQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTA 646
Query: 582 KFHINKEMG--ICTLYLPNNCPIQTVIAQ--GNIKTLKQAACLEACKKLHQIGALTDNLL 637
+ + G C + LP + PI++ + + K +A E C L + L +L
Sbjct: 647 GYLVLSVPGGYQCEVTLPESSPIRSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLR 706
Query: 638 P 638
P
Sbjct: 707 P 707
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 174/420 (41%), Gaps = 88/420 (20%)
Query: 934 PISL-STFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQE 992
P+ L + Y+F P+IMHR+ S L+A+ ML N+ + LEA T
Sbjct: 968 PVDLVAMAYNF---PAIMHRIDSNLVALEACKML------NLNVRPDLALEAFTKDSDNS 1018
Query: 993 DFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNA 1038
H E LE LGD FLK A + +F + E V++ +I N
Sbjct: 1019 GEHDAEQISFQSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNR 1078
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
L E KL IR+ +FD + W G +L G++ +T + + KT
Sbjct: 1079 NLFNNALEVKLEEHIRSMAFDRRSWYPEGL----------TLKKGKRKDLTRQHVLADKT 1128
Query: 1099 VADVVEALIGAFLSTGGEN-----------VGLIFLDRIGIKVDFVNV------PYQRQF 1141
+ADV EALIGA T E V ++ D+ + + P +
Sbjct: 1129 IADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAWQTA 1188
Query: 1142 QVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDY 1199
++ +L E+ + Y+F P LL A H +Y + ++P YQRLEFLGDA+LD
Sbjct: 1189 PCNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLP-SYQRLEFLGDALLDM 1247
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
+L++++PG P K ++H S ++ +
Sbjct: 1248 ASVEFLFHRFPGADP-------------------QSKTPCNRHATTPSPG-----DLPAE 1283
Query: 1260 SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN----REVVFQSIRPLLEPM 1315
SF + F W + PK L D++E+ GA+FVDS + R +RP E M
Sbjct: 1284 SFAR-----DF-WVRCSRPPKCLPDVVEAYVGAVFVDSRYDFARVRAFFADHVRPFFEDM 1337
>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
Length = 1842
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 151/545 (27%), Positives = 233/545 (42%), Gaps = 84/545 (15%)
Query: 865 RNNGSVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFEL 923
+NN ++ Y + + FD E P++ I +N L + + E SK SF
Sbjct: 1240 KNNSNIMEYSCSLWAKARAKRTFDEEQPVIEATYISLRRNLLDEF-DGGELETSKKSF-- 1296
Query: 924 PPELCRIIMAPISLSTFYSFT-----FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPT 978
II+ P+ +S + +P+I+HR++S L+A+ ++L ++ I
Sbjct: 1297 ------IILEPLKVSPLPTTVGAMAYLLPAIIHRVESYLIALEATDLL------HLDIRP 1344
Query: 979 IKVLEAITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHE 1024
LEA+T H E LE LGD FLK S L+ ++ E
Sbjct: 1345 DLALEAVTKDSDNSGEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSDE 1404
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR 1084
V + +I N L + +L +IR+ +F+ + W G L G+
Sbjct: 1405 FRYHVDRMCLICNKNLFNTALKLELYKYIRSAAFNRRAWYPEGP----------ELLRGK 1454
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DF 1132
K+ K+VADV EA+IGA L + E+ + R +V D+
Sbjct: 1455 TATAPNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDNHNAVVWSDY 1514
Query: 1133 VNVPYQRQFQVH---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML--PEIPRCYQ 1187
+ + ++Q A ++ R +E Y F+ P LL A H +Y+ +IP CYQ
Sbjct: 1515 YKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFIYEQIP-CYQ 1573
Query: 1188 RLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS 1247
RLEFLGD++LD +L++ +P P +LT+ + A V+N VK G HKH+L
Sbjct: 1574 RLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLGFHKHLLTLD 1633
Query: 1248 HELYKRI-NITVDSFEKLSLGSTFG--------------WESVTSFPKALGDIIESLAGA 1292
++ K I + + D E L T W +V PK L DI+E+ GA
Sbjct: 1634 SQVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLPDIVEAFIGA 1693
Query: 1293 IFVDS----GCNREVVFQSIRPLLEPMITPET-MRFHPVRELTEYCQKNHFSMK-KPVAS 1346
IFVDS G + IR E M +T HP LT + QKN PV+
Sbjct: 1694 IFVDSEYDYGEVEKFFEMHIRWYFEDMGIYDTYANKHPTTFLTNFLQKNMGCEDWAPVSK 1753
Query: 1347 RISGK 1351
+ G+
Sbjct: 1754 EVPGE 1758
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 107/218 (49%), Gaps = 39/218 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQLE E A KQN I L+TGSGKT IA++LLR ++
Sbjct: 424 RDYQLELFEKAKKQNIIAVLDTGSGKTFIAVLLLR---------------------WIID 462
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
Q+ E D +GK V F+ WK+ + + V+V T +IL L S+ +
Sbjct: 463 QELE------DRAIGK---PHRVSFF---LWKKRLDTNMVIVCTAEILRQCLHHSFVTMA 510
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +LI DE HHA+ H YA I+ +FY E D LP+IFGMTASP+ ++ +
Sbjct: 511 QINLLIFDEAHHAKKDHPYARIIKDFYRNDTEK-DIALPKIFGMTASPVDAR-----DNV 564
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
+ +LE L++S++ T S+L I +Y
Sbjct: 565 KKAAEELEGLLHSQICTAEDPSLLQYSIKGKPETLAYY 602
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 134/306 (43%), Gaps = 50/306 (16%)
Query: 365 SGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
S L+ K+V L+ L + ++ + +CI+FV+ TA +L SLLS K +
Sbjct: 721 SNNLSTKVVALLSILKDRFQRPTNDKCIVFVKERYTARLLASLLSTPEAGTPFLKAAPLV 780
Query: 424 GNNSGIQCQ---SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
G S + + + Q + FR G +N ++ATS+ EEGLD+ CNLV+ FD TV
Sbjct: 781 GTTSASAGEMHITFRSQTLTMHNFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYNTVI 840
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL-----PCSP 535
+IQSRGRAR NS Y MV+S + + KEVL H + P
Sbjct: 841 QYIQSRGRARHINSRYYHMVESHNEEQIRTI-----------KEVLKHEKMLKLFASALP 889
Query: 536 LNNHMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTP 581
+ + G +F Y V ++ T S++++ + LP P
Sbjct: 890 EDRKLTGNNFNMDYFLRKERGHRIYPVPNSDAKLTYRMSLTVLSAFVDSLPR----APES 945
Query: 582 KFHIN------KEMGICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGA 631
++ + IC LP PI+ I G T KQ +A E C LHQ G
Sbjct: 946 VLRVDYVVTTVDKQFICEAILPEEAPIRGAI--GRPATTKQVAKCSAAFETCVILHQKGY 1003
Query: 632 LTDNLL 637
+ D LL
Sbjct: 1004 INDYLL 1009
>gi|328874858|gb|EGG23223.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
Length = 2645
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 237/520 (45%), Gaps = 59/520 (11%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL--LRKP-----SPFVAVFLVP 76
+YQ E+ ++ +NTIV L TG GKT IA+M+++ L L++ + +FL
Sbjct: 171 DYQWESTRQSVPKNTIVVLPTGKGKTKIAVMVMKILYQLNNLKQEEKETYQKRMILFLTN 230
Query: 77 KVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWK-EEMSKHEVLVMTPQILLDGL 134
K+ L QQA+AIK DLK+ G+ G + E +++V+V T I+ + +
Sbjct: 231 KIPLAEQQAKAIKQDCPDLKIHLRTGE-------GESGNIMEDRQYDVIVCTADIIRNWI 283
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKS 193
+ + ++I DECHHA G+H + + E ++ D PRI G+TASP
Sbjct: 284 GYNMASMKDFYLVIYDECHHATGEHVFVKLAEE-----IKKLDREFQPRILGLTASPSTG 338
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTCAS---------ESVLSNFIPFSTAKFKFYKYDE 244
+S+ + I LE + S ++ S ES++ F K + D
Sbjct: 339 GKDTSQ--IMKNIDALERNIGSTIFRPKSLPMENPLEMESIVYQFTRQEIGTRK--EIDS 394
Query: 245 IPHALYTHLADELAMIELKHTRSLENL--------DLNEAQAELIRKKVSKINSTLLYCL 296
+ L DEL + + +N L++ + +++ + S LLY L
Sbjct: 395 VLAEATKRLCDELKFTDPNLRYNDQNYTSFYQGLKKLDDYHRDQNPPRMTSVPSGLLYKL 454
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETI----IKKFGSDASQALVTYVPSGAE 352
L L ++ + + + ++LD + + +KK V P
Sbjct: 455 FNLIGILQVQGIQAVLTSIVEDLQMDELDSYYTSAYMYYMKKIQKGVLDQFVGTNPPLYS 514
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
SK+ L + I IE + + D+R I+FV+ L LL + P
Sbjct: 515 ------SKYKA----LRDYINNFIEKSVANDTISDVRGIVFVKTRQGCSDLIKLLKKE-P 563
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
+ K+K G+ +G S +KQN I+E FR+G +VATS+LEEG+DVQ CN+VI
Sbjct: 564 VNLHIKSKLFVGH-TGEDGMSTEKQNRIMESFRKGDCKFLVATSVLEEGIDVQQCNMVIS 622
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLE 512
FDP + + IQ RGRAR ++ + ++K G++ LE
Sbjct: 623 FDPDLNLRNMIQRRGRARSKDGKFAYLIKEGETDEIKSLE 662
>gi|393238282|gb|EJD45820.1| hypothetical protein AURDEDRAFT_124545 [Auricularia delicata
TFB-10046 SS5]
Length = 1121
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 173/685 (25%), Positives = 277/685 (40%), Gaps = 120/685 (17%)
Query: 28 EALENALKQNTIVFLETGSGKTLIAIMLLR-----------------SYAYLLRKPSPFV 70
E L +LK+N + LE+GSG+T IA++ LR S R +P
Sbjct: 278 EMLNESLKRNITIVLESGSGETHIAVLRLRLEVERQAALGTNKASWTSCPPCARPLTPLR 337
Query: 71 AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQI 129
++ +V L QQ ++ VG G + D W A WK+ +S ++V+V TPQ+
Sbjct: 338 PLWTQWQVALCQQQHRLLERELPCSVGFISGALQPDKWTSAGVWKQVVSINQVVVSTPQV 397
Query: 130 LLDGLRLSYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
LLD LR +Y L + + +LI DE HHA H Y IM EFY L E D I G+TA
Sbjct: 398 LLDALRHAYMDLGLDVGLLIFDEAHHALRGHPYNRIMREFYDPL-EAADKQF--IMGLTA 454
Query: 189 SPIKSK-------VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
SP+ + +++ E + + H + +Y + ++ +
Sbjct: 455 SPLNVEYDLLCRALATRENEEELRAHVFPPTLKHVIYYHRPRHEQPECLQSLSSVYDDLD 514
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAEL---IRKKVSKINSTLLYCLSE 298
++ P + A ++ H ++ ++ +A L +RK+ + + TL L
Sbjct: 515 LEDNPFVRHLRHA-----LQTPHDGPVDAVERERQEARLAKPVRKRNTVTHKTLKTLLKS 569
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD 358
AL + +D+F +D I DASQ E+S +
Sbjct: 570 -----ALDTFYELGPSVADWFVAASVDKLRRPI------DASQ----------EFSFFNS 608
Query: 359 SKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
+ D L S Y G IIFV ++ LLS+++ H +
Sbjct: 609 KRTTEDVALPARHPRQSEASGSIYSG------IIFVTLRTASL----LLSKVIFAHPKTR 658
Query: 419 TKYIAGNNSGIQCQSRKK-------------QNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
+ G G R++ Q E +++ G +N ++A S+LEEGLDV
Sbjct: 659 DAFHVGYLMGWSNDERRRNVPELLVGGNDKAQEETLKDCADGRLNWLIAPSVLEEGLDVA 718
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG------N 519
CN I F+P + ++QSRGRAR + S +++M ST Q E+ L N
Sbjct: 719 RCNCAIRFNPGNNITGWVQSRGRARARRSSFVVMF----STMQDGQEHMLKCTALEREMN 774
Query: 520 KMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
KE + ++ P + ++ VE TG + TL++ + I +C +LP Y +
Sbjct: 775 AKYKEAMRKRAVGAPPREERRH---YFKVEQTGALLTLNNPTAHISHFCDKLPHSAYARM 831
Query: 580 TPKFHINKEMGI---------------------CTLYLPNNCPIQ-----TVIAQGNIKT 613
P + I G CTL L N T + + K
Sbjct: 832 VPIYDIFPPDGFMEPLAPGQALPAPKEESKLFGCTLMLLNVVSPALRKHVTPMVHPSEKA 891
Query: 614 LKQAACLEACKKLHQIGALTDNLLP 638
K+ + C+KL G + NLLP
Sbjct: 892 AKRQVAFDVCQKLFNAGLVNPNLLP 916
>gi|147770295|emb|CAN62473.1| hypothetical protein VITISV_005321 [Vitis vinifera]
Length = 287
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 116/197 (58%), Gaps = 6/197 (3%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
AE ++ +E +L YSF + LL EA TH S + Y+RLEF+GD+VL LIT
Sbjct: 24 AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQF--SYERLEFMGDSVLSLLITKE 81
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
+ YP L PG LT +RSA+V+ + A ++KHGLH+ + H ++ ++I ++ ++
Sbjct: 82 QFFLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEY 141
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFH 1324
L S E PK L D++ES GA+FVD C+ + V + + LLEPMI PET++ H
Sbjct: 142 PLHSNGQIE----VPKVLADVVESTIGAVFVDCNCSVDTVXKVFKGLLEPMIVPETLKVH 197
Query: 1325 PVRELTEYCQKNHFSMK 1341
PV EL E CQK ++
Sbjct: 198 PVTELNERCQKRGLKLE 214
>gi|336468520|gb|EGO56683.1| hypothetical protein NEUTE1DRAFT_123167 [Neurospora tetrasperma
FGSC 2508]
Length = 1529
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 181/677 (26%), Positives = 290/677 (42%), Gaps = 111/677 (16%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA 71
++VS AR YQLE E +LKQN IV R +
Sbjct: 66 DQVSTPAALTARAYQLEMFEASLKQNIIV---------------ARIW------------ 98
Query: 72 VFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQI 129
FL P V L QQ + ++ +K G GVD W + A W + ++V T QI
Sbjct: 99 -FLTPTVALARQQHQVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQI 157
Query: 130 LLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L D S+ +L+ + ++++DE H+ G H A +MTE Y + G +P I G+TAS
Sbjct: 158 LFDANAHSFVRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAG-LPVPSILGLTAS 216
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNS--KVYTCASESVLSN-----FIPFSTAKFKFYKY 242
P+KS + I LE ++++ + T E +L++ + S K
Sbjct: 217 PLKS-------NNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSKGPGT 269
Query: 243 DEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK-INSTLLYCLSEL-G 300
+ P L T + A L ++ + L L + E R+K+ + + EL G
Sbjct: 270 EPTPTDLMTRFLE--AYHRLDISKDPDVLLLKAQRTERAREKLRQMVTKKDTLAQKELRG 327
Query: 301 VW-LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
V+ AL I + +D++ + + S L P IG+
Sbjct: 328 VYNRALLVRREIGPWAADYY------------LTRTVSHMLAELERGEPPAQHRYIGEAL 375
Query: 360 K------FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLLSELLP 412
+ + + L+ K+ L++ L ++ +D I+FV ERV+ +IV + ++
Sbjct: 376 RSIPIPAISKEPIQLSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIV-----THIIS 428
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFRRGLVNVIVATSILEEGL 462
H K +Y + G K +N + +E FRRG N++VATS+LEEG+
Sbjct: 429 THPLTKDRYRTASMIGTASVPGKARNHMDMTKKEDMTSLEGFRRGRFNLLVATSVLEEGI 488
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK--SGDSTTQ-SRLENYLASGN 519
DV CNLVI FD + SFIQ RGRAR +S LMV+ SG+S LE +
Sbjct: 489 DVPICNLVICFDEPSNIKSFIQRRGRAREVSSTLYLMVQNASGESAMDWHNLERLMK--E 546
Query: 520 KMRKEVLSHASLPCSPLNNHMYGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPS----- 573
+ E+ +A L L++ G VESTG T+ S + +C+++ S
Sbjct: 547 RYEDEMRQNAELEL--LDDPRIGSYPVLEVESTGARMTIRDVRSHLNHFCAKVSSRSRYL 604
Query: 574 --DGYF-----KPTPKFHINKEMGICTLYLPNNCPI-----QTVIAQGNIKTLKQAACLE 621
+ YF P P + + T++LP + +++ + K A +
Sbjct: 605 QKEPYFVIRQVSPDPASPGRRTLLQATVHLPASLAPDLRRHESLWTWTSEKLAIMDASFQ 664
Query: 622 ACKKLHQIGALTDNLLP 638
A K L+ G + +NLLP
Sbjct: 665 AYKALYNAGLVNENLLP 681
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 29/277 (10%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
+P+ ++ L+A +L L C+Q +P I A+ + + + E LE +GD+
Sbjct: 939 IPAFTRAVEMSLVAADLMYNRLG-CLQLDNLPLITT--ALISSGSRGPTNYERLEFIGDT 995
Query: 1006 FLKYAA--SQQLFKTYQ----NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFD 1059
LK+ A + + N+HE LLS K+++++N LC+ + L +I S
Sbjct: 996 ILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYI-IHSAA 1054
Query: 1060 PKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGG---- 1115
K W + +D L + +++ SK VADVVE+LIGA GG
Sbjct: 1055 SKKW--------RPKFVEDYLDEMKSPESAETRQMSSKMVADVVESLIGAAYMCGGMSKA 1106
Query: 1116 -ENVGLIFLDRIGIKVDFVNVPYQRQ--FQVHAERLVNVRHLESL---LNYSFRDPSLLV 1169
E V L+ + + + R F+ + + + LE L ++Y+F SLL+
Sbjct: 1107 LECVALLLPTPKSSQFKWQEISLSRAQLFEFAPKDAILSKQLEPLEKAMSYTFHKKSLLI 1166
Query: 1170 EALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYL 1205
EA+TH S L CY+ LEFLGDA+LD ++ L
Sbjct: 1167 EAMTHPSCAGLSTNESCYELLEFLGDAILDVIVVKRL 1203
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 1183 PRCYQRLEFLGDAVLDYL--ITVYLYNKYPGLSPGY----LTDMRSASVNNDCYALSSVK 1236
P Y+RLEF+GD +L + +T + + + P + L+ + VNN +S
Sbjct: 983 PTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRD 1042
Query: 1237 HGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
GL ++I+H++ R D +++ + ++S K + D++ESL GA ++
Sbjct: 1043 FGLDEYIIHSAASKKWRPKFVEDYLDEMKSPESAETRQMSS--KMVADVVESLIGAAYMC 1100
Query: 1297 SGCNR 1301
G ++
Sbjct: 1101 GGMSK 1105
>gi|302694007|ref|XP_003036682.1| hypothetical protein SCHCODRAFT_102832 [Schizophyllum commune H4-8]
gi|300110379|gb|EFJ01780.1| hypothetical protein SCHCODRAFT_102832, partial [Schizophyllum
commune H4-8]
Length = 1489
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 215/506 (42%), Gaps = 77/506 (15%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
+PL+ RI N L+ + K + +P ELC I P S+ + +PS+
Sbjct: 914 QPLIEVERIPQAHNCLTLMQGPPDKGDVPAKYMIP-ELCFKITIPASV--MRTALLLPSV 970
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKY 1009
+ R+ + L L + +H + + A+TT D + E LE GD+FLKY
Sbjct: 971 LTRIDEIFLVKELNAIHFNHIIAEDLLHA-----ALTTPSAGFDRNYERLELYGDAFLKY 1025
Query: 1010 AASQQLF-KTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGD 1068
AS LF ++ N+ EG L + +ISN L + LP F+ + F + W
Sbjct: 1026 LASLHLFVMSHHNDSEGKLHAARRPLISNQKLMECSLALGLPSFVIGKPFVIRFW----- 1080
Query: 1069 NSGSYELN--DDSLFNGR-----KIYVTG------------------------------- 1090
++ +N S G+ K+ T
Sbjct: 1081 GPANFRMNPPGGSAEKGKEKEQGKVAETPPPASDAVGANQGEGGGGKKRRKKKKGEPNDG 1140
Query: 1091 --RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYQRQFQVH 1144
++ + K +ADVVEA++GA + G + GL +G+ V D + ++ Q +H
Sbjct: 1141 QIQQMLSDKALADVVEAILGAAHLSAGRDGGLQVAKALGLPVAKNADIWD-DFKAQVSMH 1199
Query: 1145 AE-------RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVL 1197
A R + ++S++ P LL ALTH + P Y+R+EFLGDA+L
Sbjct: 1200 ATPSAVSFLRPGTIDGVQSVIGQKLNKPELLALALTHANNSSPL--GNYERIEFLGDALL 1257
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINIT 1257
D+ + Y+Y KY P LT ++SA V N A + GL++H+ SH++ + IN
Sbjct: 1258 DFQVVEYVYRKYTQQPPSVLTLLKSAMVGNSPLAAICAESGLYRHLHQKSHQIQQSINTY 1317
Query: 1258 VDSFEKLSLGSTFGW-----ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
+ + +K E + AL DI+ES+ GAI++ V Q + L
Sbjct: 1318 LTALQKAKQKEYAAADDDLRERGQYWFDALSDIVESIVGAIYISDDLEWTGVQQLFKHFL 1377
Query: 1313 EPM----ITPETMRFHPVRELTEYCQ 1334
+P I T+ HP + L E Q
Sbjct: 1378 QPFYEKHIRMNTLAVHPTKILLELVQ 1403
>gi|119190771|ref|XP_001245992.1| hypothetical protein CIMG_05433 [Coccidioides immitis RS]
Length = 1435
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 178/694 (25%), Positives = 292/694 (42%), Gaps = 148/694 (21%)
Query: 5 SMESDTTEEVSADTLP--FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
S+ D T + LP AR YQLE L +L+QN IV ++TGSGKT IAI+ ++
Sbjct: 71 SILEDGTSKSQEALLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ----- 125
Query: 63 LRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
++ E H K W D+ ++ +
Sbjct: 126 --------------------RELERCPAHK-----KIWDDILLNI-------------RI 147
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSNLP 181
++ TPQ+LLD L + L+ I +L+ DE HH IM +FYH E G LP
Sbjct: 148 VISTPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGLP 207
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESV----LSNFIPFSTAKF 237
I G+TA S + + Q DLE L + C + + + F+ +
Sbjct: 208 HILGLTA----SPTTRARQT------DLEVLEINLNAVCVTPKMHREEMMQFVHMPEYRS 257
Query: 238 KFYKYDEIPHALYTHLADELAMI--EL--------KHTRSLENLDLNEAQAELIRKKVSK 287
Y+ D ++ + ++L++I EL K R +L + + + K +
Sbjct: 258 IEYQPDV---QNFSSIVEKLSVIINELDIENDPFVKFMRRRNDLKSRQRLLDALENKKTP 314
Query: 288 INSTLLYCLS-------ELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDAS 340
L CL ELG W S+ F + G +K ++AS
Sbjct: 315 CLDQLKRCLRRSRVIHRELGPW------------ASERFLTRCIMG-----LKSKQTNAS 357
Query: 341 QALVTYVPSGAEWSIGDDS-KFNLDSGLLT----------EKIVCLIESLLEYRGVEDIR 389
P A+W D+S N+ S +++ +++ + L+++ +E +
Sbjct: 358 G------PQWADWDREDNSYMLNVLSQVVSSTEMGVQNPPDELSRKVHKLIDFLVLEHVN 411
Query: 390 C---IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK---------- 436
I+F E I+L LLS L PR KT G+++ + SRK
Sbjct: 412 GSIGIVFAEERTIVIMLAQLLS-LHPRTKHIKTTAFLGSSASV---SRKSDITELHNPID 467
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q+ +++ R G ++I+AT++LEEG+DV C+LVI FD + + SFIQ RGRAR + S +
Sbjct: 468 QSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRGRARKKGSKF 527
Query: 497 LLMVKSGDSTTQSRL---ENYLASGNKMRKEVLSHASLPCSPLNN-HMYGEDFYHVESTG 552
L + S D T S L E + K L H L N G D + V STG
Sbjct: 528 ALFLHSEDRATSSELHLMEKTMKQLYLENKRALEHIQY----LENVEEEGYDGFRVASTG 583
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--------NKEMGICTLYLPNNCPIQT 604
+ TLS++ + + +C L ++ + P+F + + ++ + + P +
Sbjct: 584 ALLTLSNARNHLSHFCGTLSAE-FIATDPEFVLEGDDTTGFSAKVILPSFLDPKLREFRG 642
Query: 605 VIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
++ K K+ A +A L++ G + D L+P
Sbjct: 643 ILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 203/468 (43%), Gaps = 80/468 (17%)
Query: 884 QLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE-------LPPELCRIIMAPI 935
Q+ +DRE P + GR ++L + EPS S P C + P+
Sbjct: 881 QVTYDREVPHIEGRVWPKRTDFLHRL------EPSNTSKAHHTAKCFYPANNCSVDRLPV 934
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDF 994
S F F+P ++H +++ +A L +L N+++ VL AI++ +E
Sbjct: 935 EYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VLTAISSSAAREAS 988
Query: 995 HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
+ + LE LGDS LK S QL + EG L+++K I+SN L + L FI
Sbjct: 989 NYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFIL 1048
Query: 1055 TESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTG 1114
T+ F W SY N D + G T +++ +K +ADVVEALIGA G
Sbjct: 1049 TKPFTGAKW------RPSY--NTDHINTGDMTEPT--REMSTKVLADVVEALIGAANIDG 1098
Query: 1115 GENVGL----IFLDRIGIKV--DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLL 1168
GEN L IF+ I + VN+ + ++ E + +E L+ Y+F+ LL
Sbjct: 1099 GENKILNCLKIFIPDIKWSPLNECVNILHHQEDSFSDENNNMLSEIEGLVGYTFKKKPLL 1158
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
+ A+TH S YQRLEF+GD++LD ++ L+ + MR+A VN D
Sbjct: 1159 LAAVTHPSSK--GSGHSYQRLEFVGDSILDIIVVQELFESPRCFHHFDMHLMRTALVNAD 1216
Query: 1229 ----------------------------------CYALSSVKHGLHKHILHASHEL---Y 1251
Y +KH I++A Y
Sbjct: 1217 FLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQY 1276
Query: 1252 KRINITVDSFEKLSLGSTFGWESVTSFPKA--LGDIIESLAGAIFVDS 1297
++++ +D EKL T+ W + A DI+ES+ GAIF+DS
Sbjct: 1277 EKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILT 1049
Query: 1246 ASHELYK-RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
K R + D + S K L D++E+L GA +D G N+
Sbjct: 1050 KPFTGAKWRPSYNTDHINTGDMTEPTREMST----KVLADVVEALIGAANIDGGENK 1102
>gi|170099920|ref|XP_001881178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643857|gb|EDR08108.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1469
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 218/483 (45%), Gaps = 91/483 (18%)
Query: 930 IIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKK 989
++++P+ Y+F +P+++ + L +L+ + +IP ++ AIT
Sbjct: 923 VLLSPVDAD--YAF-LLPALLRSIGMLTTTHSLQKAVFTPASPISSIPMQLLMVAITAPS 979
Query: 990 CQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKL 1049
E + + LETLGD+ LK+ QL Y HEG L+ KK+ +SN L K ++L
Sbjct: 980 SNERKNYQRLETLGDTVLKFVCGIQLLSEYPLWHEGYLTRKKDHAVSNVRLAKENVAREL 1039
Query: 1050 PGFIRTESFDPKMW----IIPGDNSGSYE---LNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
+I + K W + D + E + + + +K + + +K +ADV
Sbjct: 1040 YRWIIRDMLLGKKWKPHYLSKKDAETTPEPDKMTVEEVNTKKKKKKGKSQSLSTKVLADV 1099
Query: 1103 VEALIGAFLSTGGENVG---LIFLDRIGIKV---------------DFVNVPYQRQFQVH 1144
VE++IGA GG ++G + F D +G+K D PY Q
Sbjct: 1100 VESIIGAAYLHGGFDLGYECIKFFD-LGLKWQPLPTRIEQLLSRARDSEETPYPHQ---- 1154
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE-IPRCYQRLEFLGDAVLDYLITV 1203
LV+V ES+L Y+F LL+EALTH SY + Y+R+EFLGD++LD ++T
Sbjct: 1155 ---LVDV---ESMLGYTFNHKLLLIEALTHASYQQDQYTSSSYERMEFLGDSILDMIVTD 1208
Query: 1204 YLYNKYPG--LSPGYLTDMRSASVNNDCYALSSVKHGLH--------------------- 1240
YLY + PG SPG++ +SA VN A ++ LH
Sbjct: 1209 YLY-RAPGKEYSPGHMHLRKSAVVNAHFLAFICLRTCLHFDASMPRPSPDSQGDQGPVKI 1267
Query: 1241 ------------KHILHASHELYKRINITVDSFEK--------LSLGSTFGWESVTSF-- 1278
+ +LH+S + + T F K L G F W ++T
Sbjct: 1268 ELAPDSQEIYLWQCLLHSSPRVLDDQSNTFIRFRKCKAVIEKALEKGIIFPWAALTRLQA 1327
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRP-----LLEPMITPETMRFHPVRELTEYC 1333
PK L D++ESL GAIF+DS + + V +R +LE ++ + HPV L+++
Sbjct: 1328 PKFLSDMVESLIGAIFLDSNGDMDCVKGVLRKTGIIQILERIVRDDVDILHPVSRLSDWA 1387
Query: 1334 QKN 1336
KN
Sbjct: 1388 SKN 1390
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 6/177 (3%)
Query: 18 TLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPK 77
+ P R YQ E LE +L++N I+ L+TGSGKTLIA++ L+ + R+P+ V F P
Sbjct: 9 STPATRGYQQEMLEESLRKNIIIALDTGSGKTLIAVLRLKHEIH--REPTK-VCWFFAPT 65
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRL 136
V L QQ I+ + + VG G + D W + A W++ + H V+V TPQ+ LD LR
Sbjct: 66 VALCEQQKSVIQTYLPVSVGLISGSLEPDQWRNAALWEKVIRTHRVMVSTPQVFLDALRH 125
Query: 137 SYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRL-LETGDSNLPRIFGMTASPI 191
Y L I +L+ DE HHA H Y IM EFY L ++ D P + G+TASPI
Sbjct: 126 GYLVLGRDICLLVFDEAHHAVDNHPYNRIMQEFYFDLPIQGSDFVRPAVLGLTASPI 182
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 150/353 (42%), Gaps = 82/353 (23%)
Query: 344 VTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV-----EDIRCIIFVERVI 398
V+Y P I DDS ++K+ L+E LL + E IIFV+R
Sbjct: 361 VSYYPD----DITDDS---------SDKVRVLVECLLAEKAEAEAHDEAYSGIIFVQRRD 407
Query: 399 TAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS-------------RKKQNEIVEEFR 445
+ L +ELL H K ++ G G S R+ Q + + +F+
Sbjct: 408 AVLAL----AELLSNHPQTKDQFRVGLLIGTSESSYRHAVMDITRNLIRESQEDTIADFK 463
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
G N+IV+TS+ EEG+D+Q+C VI +DP + S+ QSRGRAR Q S + +M + G
Sbjct: 464 IGEKNLIVSTSVAEEGIDIQACGSVIRWDPPPNMASWAQSRGRARRQRSTFTVMFEDG-- 521
Query: 506 TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED-------------FYHVESTG 552
S+ + +A + +++++ + P L + +D F H STG
Sbjct: 522 ---SKNQKDVAKWENLERQMVALYNDPTRDLEFILDEQDSDEMEEEEDDDWVFRH-PSTG 577
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGI--------------------- 591
+ TL S+VS + +C+ +P+ + P + I+ I
Sbjct: 578 ALLTLHSAVSHLSHFCAVIPNSAHVDNRPLYDIDPPDFIEGWHALEPHARAIIPYTGPYG 637
Query: 592 CTLYLPNNCPIQT------VIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ LP P+ T + I + AA A L++ G L DNLLP
Sbjct: 638 SKVTLPRALPLPTREFFVERMYDTKISAHRHAA-FRAYFSLYEAGLLNDNLLP 689
>gi|57236094|gb|AAW48724.1| dicer-1 [Aedes aegypti]
Length = 2192
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 170/351 (48%), Gaps = 61/351 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-NVPYQ----------RQFQ 1142
+ K+VAD VEALIGA+L G L+ + +GI+V V VPY ++++
Sbjct: 1840 IPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKVPGSSQRYE 1899
Query: 1143 VHAERLVNV-------------------RHLESLLN-YS-FRDP-------SLLVEALTH 1174
+ +V + LE LL+ YS F D S L++A+TH
Sbjct: 1900 KDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFEDSLGYHHSRSYLLQAMTH 1959
Query: 1175 GSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSS 1234
SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA VNN +A +
Sbjct: 1960 ASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLA 2019
Query: 1235 VKHGLHKHILHASHELYKRIN-----------ITVDSFEKLSLGSTFGWESVTSFPKALG 1283
V+H HK+ H S L I+ I + + +S E V PKALG
Sbjct: 2020 VRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLISEDECDEAEDV-EVPKALG 2078
Query: 1284 DIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMK 1341
D+ ES+AGAIF+DS + + V++ R ++ P I ++ P+REL E +
Sbjct: 2079 DVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPKSPIRELLE-LEPETAKFG 2137
Query: 1342 KPVASRISGKAAVTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
KP + VTVEV G TF + + + AK A K L+ L+
Sbjct: 2138 KPEKLADGRRVRVTVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2183
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY+N HEG LS + + +S
Sbjct: 1654 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVS 1712
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG + L + F+P W+ P
Sbjct: 1713 NLNLYRLGRRKVLGESMIATKFEPHDNWLPP 1743
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E L +A ++N I+ L S K IA+ L+ LRKP+ + + +
Sbjct: 17 RDYQVELLASAKERNLILCLAHNSSKEFIALKLIHELGSQLRKPAGKRK-----RTIYIS 71
Query: 83 QQAEA---IKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
Q I+ TDLKV D+ D + W++ + ++V++ + LD + Y
Sbjct: 72 QNDSVFNLIRDLTDLKVINV-NDLE-DADEDYDWEQIVDDYQVIITDERKCLDAIICGYL 129
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
LN + +L++D+CH G + + + ++Y+ E P+I G+ A P+
Sbjct: 130 DLNEVNLLVIDDCHKVYGNEEISKLFIDYYNVCREK-----PKILGL-AGPL 175
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR N+++ TS+LEEG+D+ CNLVI ++ + S++Q +GRAR +
Sbjct: 550 RKQEEVLKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARASTA 609
Query: 495 DYLLMV 500
++L V
Sbjct: 610 YHILFV 615
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 33/147 (22%)
Query: 535 PLNNHMYGEDFYH----------VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFH 584
P +N Y + F H + LS+++ ++ YC++LPSD + K TP +
Sbjct: 725 PESNQQYADCFSHYLEPYRPLPETDENSNSVRLSNAIQMVNKYCAKLPSDTFTKLTPLWR 784
Query: 585 INK------EMGICTLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDN 635
K E+ CT+ +P N P++ I + T ++ A AC+ LH+ G L D+
Sbjct: 785 GAKTVRNGQELYQCTIRMPINSPLKEDIVGLPMPTEILARRMAAYTACRVLHKAGELDDS 844
Query: 636 LLP--------------DIVVEKHDAQ 648
L P D +E +DAQ
Sbjct: 845 LQPIGKESFRAFEADWEDFELESNDAQ 871
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
+L N+ PS++++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1645 NLNNHPGPSPSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYENVHEG 1701
Query: 1216 YLTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1702 KLSHLRSKQVSN 1713
>gi|29424049|gb|AAO73809.1| dicer-1 [Anopheles gambiae]
Length = 2259
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 136/279 (48%), Gaps = 39/279 (13%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A L E L Y FRD S L++A+TH SY + CYQRLEFLGDA+LDYLIT +
Sbjct: 1976 ARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRH 2035
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN--------- 1255
LY SPG LTD+RSA VNN +A +V+HG HK+ LH S L + I+
Sbjct: 2036 LYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQEN 2095
Query: 1256 ---ITVDSF-----------------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
IT + + + G G PKALGD+ ES+AGAIF+
Sbjct: 2096 GHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFL 2155
Query: 1296 DSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAA 1353
DS + + V++ R ++ P I ++ P+REL E + KP +
Sbjct: 2156 DSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEM-EPETAKFGKPEKLTDGRRVR 2214
Query: 1354 VTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
VTVEV G TF + + + AK A K L+ L+
Sbjct: 2215 VTVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2248
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P I +L+A+T + +LE LET+GDSFLKYA + L+ Y N HEG LS + + +S
Sbjct: 1664 PAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1722
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L + F+P W+ P
Sbjct: 1723 NLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 1753
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR N+++ TS+LEEG+++ CNLVI ++ S+ Q +GRA+ +
Sbjct: 598 RKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGA 657
Query: 495 DYLLMVKSGDSTTQSRLENYLAS 517
++L V ++ +++ + +AS
Sbjct: 658 YHVLFVTPENAASRNEQQEDMAS 680
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIML---LRSYAYLLRKPSPFVAVFL--VPK 77
R+YQ E L A ++N IV + S K +A+ L +R+ + +P A++L + +
Sbjct: 19 RDYQTELLATAREENLIVCIAHNSAKEFLAVKLIQSMRTNRWSSHPEAPGKAIYLTRMDR 78
Query: 78 VVLVPQQAEAIKMHTDLKVGKY---WGDMGVDFWDGA--TWKEEMSKHEVLVMTPQI-LL 131
+L + + TDL+V G DGA T +++ +VL + LL
Sbjct: 79 SLL----SSMVSNLTDLQVANVDDVEDSEGSHEPDGASNTPVTDVASADVLFFGSETTLL 134
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP----RIFGMT 187
+ ++ I +LI+DECH G+ + I H + S+ P RI G+
Sbjct: 135 QYIEQGTVRVQDISLLIVDECHKNYGRQELWEICARLTH---QAPSSDRPAQRTRILGL- 190
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
A P+ + E+ W+ +H LE + +++ T S +++ + FST
Sbjct: 191 AGPLHGAGCTPERLCWE-LHYLERCLRARIETA---SDITSVLRFST 233
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HL+ S F +N T++++Y +Y I + R+PLL+ R F
Sbjct: 1039 QYFYVAEICNHLSPKSTFPGSN--YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARLNFL 1096
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
Y+++ ++ K + + E L PELC I P SL + + +P ++
Sbjct: 1097 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTIHPFPASL--WRAAVCLPCVL 1154
Query: 951 HRLQSLLLAVNLKNML 966
+R+ +LLLA ++ +
Sbjct: 1155 YRINALLLADEIRRQV 1170
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 1683 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723
>gi|58382645|ref|XP_312076.2| AGAP002836-PA [Anopheles gambiae str. PEST]
gi|55241936|gb|EAA07793.2| AGAP002836-PA [Anopheles gambiae str. PEST]
Length = 2256
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 136/279 (48%), Gaps = 39/279 (13%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A L E L Y FRD S L++A+TH SY + CYQRLEFLGDA+LDYLIT +
Sbjct: 1973 ARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRH 2032
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN--------- 1255
LY SPG LTD+RSA VNN +A +V+HG HK+ LH S L + I+
Sbjct: 2033 LYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQEN 2092
Query: 1256 ---ITVDSF-----------------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
IT + + + G G PKALGD+ ES+AGAIF+
Sbjct: 2093 GHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFL 2152
Query: 1296 DSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAA 1353
DS + + V++ R ++ P I ++ P+REL E + KP +
Sbjct: 2153 DSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEM-EPETAKFGKPEKLTDGRRVR 2211
Query: 1354 VTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
VTVEV G TF + + + AK A K L+ L+
Sbjct: 2212 VTVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2245
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P I +L+A+T + +LE LET+GDSFLKYA + L+ Y N HEG LS + + +S
Sbjct: 1664 PAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1722
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L + F+P W+ P
Sbjct: 1723 NLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 1753
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR N+++ TS+LEEG+++ CNLVI ++ S+ Q +GRA+ +
Sbjct: 598 RKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGA 657
Query: 495 DYLLMVKSGDSTTQSRLENYLAS 517
++L V ++ +++ + +AS
Sbjct: 658 YHVLFVTPENAASRNEQQEDMAS 680
Score = 48.5 bits (114), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIML---LRSYAYLLRKPSPFVAVFL--VPK 77
R+YQ E L A ++N IV + S K +A+ L +R+ + +P A++L + +
Sbjct: 19 RDYQTELLATAREENLIVCIAHNSAKEFLAVKLIQSMRTNRWSSHPEAPGKAIYLTRMDR 78
Query: 78 VVLVPQQAEAIKMHTDLKVGKY---WGDMGVDFWDGA--TWKEEMSKHEVLVMTPQI-LL 131
+L + + TDL+V G DGA T +++ +VL + LL
Sbjct: 79 SLL----SSMVSNLTDLQVANVDDVEDSEGSHEPDGASNTPVTDVASADVLFFGSETTLL 134
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP----RIFGMT 187
+ ++ I +LI+DECH G+ + I H + S+ P RI G+
Sbjct: 135 QYIEQGTVRVQDISLLIVDECHKNYGRQELWEICARLTH---QAPSSDRPAQRTRILGL- 190
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
A P+ + E+ W+ +H LE + +++ T S +++ + FST
Sbjct: 191 AGPLHGAGCTPERLCWE-LHYLERCLRARIETA---SDITSVLRFST 233
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HL+ S F +N T++++Y +Y I + R+PLL+ R F
Sbjct: 1039 QYFYVAEICNHLSPKSTFPGSN--YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARLNFL 1096
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
Y+++ ++ K + + E L PELC I P SL + + +P ++
Sbjct: 1097 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTIHPFPASL--WRAAVCLPCVL 1154
Query: 951 HRLQSLLLAVNLKNML 966
+R+ +LLLA ++ +
Sbjct: 1155 YRINALLLADEIRRQV 1170
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 1683 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723
>gi|347968645|ref|XP_003436256.1| AGAP002836-PB [Anopheles gambiae str. PEST]
gi|333467908|gb|EGK96757.1| AGAP002836-PB [Anopheles gambiae str. PEST]
Length = 2336
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 136/279 (48%), Gaps = 39/279 (13%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A L E L Y FRD S L++A+TH SY + CYQRLEFLGDA+LDYLIT +
Sbjct: 2053 ARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRH 2112
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN--------- 1255
LY SPG LTD+RSA VNN +A +V+HG HK+ LH S L + I+
Sbjct: 2113 LYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQEN 2172
Query: 1256 ---ITVDSF-----------------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
IT + + + G G PKALGD+ ES+AGAIF+
Sbjct: 2173 GHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFL 2232
Query: 1296 DSGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAA 1353
DS + + V++ R ++ P I ++ P+REL E + KP +
Sbjct: 2233 DSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEM-EPETAKFGKPEKLTDGRRVR 2291
Query: 1354 VTVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
VTVEV G TF + + + AK A K L+ L+
Sbjct: 2292 VTVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 2325
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P I +L+A+T + +LE LET+GDSFLKYA + L+ Y N HEG LS + + +S
Sbjct: 1744 PAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1802
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L + F+P W+ P
Sbjct: 1803 NLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 1833
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E+++ FR N+++ TS+LEEG+++ CNLVI ++ S+ Q +GRA+ +
Sbjct: 598 RKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGA 657
Query: 495 DYLLMVKSGDSTTQSRLENYLAS 517
++L V ++ +++ + +AS
Sbjct: 658 YHVLFVTPENAASRNEQQEDMAS 680
Score = 48.5 bits (114), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIML---LRSYAYLLRKPSPFVAVFL--VPK 77
R+YQ E L A ++N IV + S K +A+ L +R+ + +P A++L + +
Sbjct: 19 RDYQTELLATAREENLIVCIAHNSAKEFLAVKLIQSMRTNRWSSHPEAPGKAIYLTRMDR 78
Query: 78 VVLVPQQAEAIKMHTDLKVGKY---WGDMGVDFWDGA--TWKEEMSKHEVLVMTPQI-LL 131
+L + + TDL+V G DGA T +++ +VL + LL
Sbjct: 79 SLL----SSMVSNLTDLQVANVDDVEDSEGSHEPDGASNTPVTDVASADVLFFGSETTLL 134
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP----RIFGMT 187
+ ++ I +LI+DECH G+ + I H + S+ P RI G+
Sbjct: 135 QYIEQGTVRVQDISLLIVDECHKNYGRQELWEICARLTH---QAPSSDRPAQRTRILGL- 190
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
A P+ + E+ W+ +H LE + +++ T S +++ + FST
Sbjct: 191 AGPLHGAGCTPERLCWE-LHYLERCLRARIETA---SDITSVLRFST 233
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HL+ S F +N T++++Y +Y I + R+PLL+ R F
Sbjct: 1119 QYFYVAEICNHLSPKSTFPGSN--YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARLNFL 1176
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
Y+++ ++ K + + E L PELC I P SL + + +P ++
Sbjct: 1177 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTIHPFPASL--WRAAVCLPCVL 1234
Query: 951 HRLQSLLLAVNLKNML 966
+R+ +LLLA ++ +
Sbjct: 1235 YRINALLLADEIRRQV 1250
Score = 42.0 bits (97), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 1763 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1803
>gi|449295521|gb|EMC91542.1| hypothetical protein BAUCODRAFT_570103 [Baudoinia compniacensis
UAMH 10762]
Length = 1569
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 16/236 (6%)
Query: 16 ADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY--AYLLRKPS---PFV 70
A+ + R YQ E + A K NTI L+TGSGKTLIA++LL+ L R+ + P +
Sbjct: 81 AEIIKNPREYQWELFQRAQKSNTIAVLDTGSGKTLIAVLLLKWIIDVELERRATGEQPQI 140
Query: 71 AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL 130
A FLV V LV QQ ++ + D V + G GVD W A W + +++V+V T +L
Sbjct: 141 AFFLVASVTLVYQQLAVLQQNLDHPVARVCGADGVDNWSKARWMKLFVENKVIVATADVL 200
Query: 131 LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP 190
L S+ + I +LI DE HHA+ H YA I+ +FY L + PRIFGMTASP
Sbjct: 201 HACLAHSFISMKQISLLIFDEAHHAKKNHAYARIVKDFY---LSEDEGRRPRIFGMTASP 257
Query: 191 IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
I +K D Q +LE+L++S++ T A S++ K ++YD +P
Sbjct: 258 IDAKT-----DVVQAASELESLLHSQIATTADMSLVE---AVKKPKEHVFQYDALP 305
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 205/457 (44%), Gaps = 61/457 (13%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSI 949
+P+L +I +N L+ +K++ + L PE RI P +++T S P+I
Sbjct: 973 QPVLEAVKILLRRNMLAT--PEKKELTLRTKAFLCPEPLRISALPPAVAT--SCFAWPAI 1028
Query: 950 MHRLQSLLLAVNLKNMLLDHCMQNVTIPTI-KVLEAITTKKCQEDFHL--------ESLE 1000
+HRL+S L+A+ M+ C + + + K + QE + E LE
Sbjct: 1029 IHRLESYLIALEASKMIGVDCSPQMALAAMTKDSDNSGDHDKQEHINFQHGMGENYERLE 1088
Query: 1001 TLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP 1060
+GD+FLK A S F N++E VK+ ++ N L + E KL ++R+ +F
Sbjct: 1089 FIGDTFLKTATSISTFIQNPNDNEFEFHVKRMLMLCNQNLFNVAKELKLYEYVRSIAFSR 1148
Query: 1061 KMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAF------ 1110
++W G + G+ + + S+ + + KT+ADV EALIGA
Sbjct: 1149 RLWYPEGLKLLEGKGANKQEETSVI---------KHSLGEKTIADVCEALIGAAYVTHDR 1199
Query: 1111 -------------------LSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNV 1151
L ++ L + D I P + +V A +
Sbjct: 1200 PGDQWQPSHWENAVRAVTRLVNSADHTMLTWSDYIAA----YEKPSYQTGEVSASQRDLA 1255
Query: 1152 RHLESLLNYSFRDPSLLVEALTHGS--YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+E Y F+ P LL A H S M ++P YQRLEFLGDA+LD YL+++Y
Sbjct: 1256 EKVEREHPYHFKYPRLLRSAFIHPSQPVMYEKVPN-YQRLEFLGDALLDMASIAYLFHRY 1314
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI---NITVDSFEKLSL 1266
P P +LT+ + A V+N V G H H+ H+S L +I I + ++++
Sbjct: 1315 PDRDPQWLTEHKMAMVSNKFLGAVCVNVGFHLHLRHSSAILQHQIADYAIELLETKRVAG 1374
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREV 1303
+ W +V+ PK L DI+E+ GA F+DS + V
Sbjct: 1375 DAKDYWTTVSDPPKCLPDIVEAYVGAAFIDSNFDYNV 1411
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 35/282 (12%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSGIQCQ---SRKK 436
E+ RCI+FVER TA +L + +P + ++ G N+ + +
Sbjct: 453 EFETPSSRRCIVFVERRHTARLLSATFKRFGVP---NLRPGFLVGANNPEMDEDNFTTPM 509
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q + +FR G +N + T++ EEGLD+ CNLVI FD RT+ ++QSRGRAR +NS +
Sbjct: 510 QVLTMAKFRSGEINCLFCTTVAEEGLDIPDCNLVIRFDMYRTMIQYVQSRGRARQRNSKF 569
Query: 497 LLMVKSGDSTTQSRLENYLASGNKMRK--EVLSHASLPCSPLNNHMYGED---------- 544
L MV+ G+S L A MR+ ++L P N +YG +
Sbjct: 570 LHMVEKGNSVHAELLLQVRAQERAMRRFCQLL--------PENRRLYGNEGILETLMTKE 621
Query: 545 ----FYHVESTGTIATLSSSVSLIYFYCSRLP--SDGYFKPTPKFHINKEMGICTLYLPN 598
Y ESTGT T +++ + + S +P +D +PT + + E + + LP
Sbjct: 622 KALRTYIEESTGTKLTYGNALVCLANFISSIPTDTDDMLQPTYIVNSHGEKFVAEVLLPG 681
Query: 599 NCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLLP 638
N PI++ I + K L K +A EAC++L + L ++L+P
Sbjct: 682 NAPIRSAIGKVCTKKLLAKCSAAWEACRELRRKEYLDEHLMP 723
>gi|226528435|ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea mays]
gi|194705648|gb|ACF86908.1| unknown [Zea mays]
gi|414870636|tpg|DAA49193.1| TPA: endoribonuclease Dicer [Zea mays]
Length = 329
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 8/242 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 1208
+V +E+LL Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 47 DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMSREVFRT 106
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
Y L PG LT +R+A+V+ + A +V GLH+ + H + +L +I ++ K + S
Sbjct: 107 YRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAPKLQDQICFFIEEMRKYPVHS 166
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+ PK L DI+ESL GAI++DS ++E V++ R L +P+I ET+ HPV E
Sbjct: 167 N----GLLDPPKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADPLIGLETLGKHPVSE 222
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
L E+CQK H +K + ++ V+V +G + K+ A+ A K+ L
Sbjct: 223 LFEFCQKTHRGVK---FLKDEWDKSLKVQVLIDGEVVGSAIYGPKKEIAQNRAAKDALDK 279
Query: 1389 LR 1390
L+
Sbjct: 280 LK 281
>gi|159122296|gb|EDP47418.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1384
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 189/418 (45%), Gaps = 65/418 (15%)
Query: 926 ELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTIKVLEA 984
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 884 EACTIDRLPFTMAIF--GLFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 937
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
I+T + + E LGDS LK++ S QLF + N HEG LS ++ I+ N L K
Sbjct: 938 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 997
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
+ L +I T+ + W P L + + V ++++ +K +ADVVE
Sbjct: 998 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLERVPAKRQMSTKVLADVVE 1044
Query: 1105 ALIGAFLSTGGENVGLI----FLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNY 1160
ALIGA GG + FL I + + A ++N R L+ + Y
Sbjct: 1045 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDR-LKDHIGY 1103
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
+F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N G +T +
Sbjct: 1104 TFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKI 1163
Query: 1221 RSASVN------------------------NDCYALSSVKHGLH------------KHIL 1244
+ A VN D +A++S + + K
Sbjct: 1164 KHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAAR 1223
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
AS ++ + + S L + W +++ K DIIES+ GAIFVDSG N
Sbjct: 1224 DASLARHRALRDEIAS--SLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGN 1279
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 167/697 (23%), Positives = 302/697 (43%), Gaps = 121/697 (17%)
Query: 10 TTEEVSADTLPF-ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL------ 62
+T D P+ RNYQLE LE ++K+N IV A+ L SY L
Sbjct: 3 STVSTCQDASPYQPRNYQLEMLEASMKENIIV-----------AVCSLNSYVKLQNGNDN 51
Query: 63 ------LRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKE 115
+ + +V + + ++ A++ T + K V+ W D + W
Sbjct: 52 DPLDGYRERQNAYVFALCIQQHEVIASNLPAVRTRTLTGLDK------VELWTDQSIWDA 105
Query: 116 EMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLE 174
++ + V+V T +L D L + K++ + +LI DE HH +H IM +FYH L +
Sbjct: 106 VLNGYRVIVSTHAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTK 165
Query: 175 TGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
+G + +PRI G+TASP+ V S+ Q+ +L+ + C + + +
Sbjct: 166 SGPAAVPRIMGLTASPV---VRSNHQELLMVESNLDAV-------CRTPRLHRQEL---- 211
Query: 235 AKFKFYKYDEIPHALYTHL------ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKI 288
KF + YT + L + L H + ENLD+ + + R + S +
Sbjct: 212 --LKFTHRPHLQQIWYTPTDPAGFRSASLTLGALYH--AWENLDIGD-DPYIQRLRKSPL 266
Query: 289 NSTLL---------YCLSELGVWL--ALKAAETISCYESDFFAWEQLDGFGETIIKKFGS 337
+ L YC +L ++ + E + + ++++ + + + + + S
Sbjct: 267 DDRALKKALLTGKTYCREQLRRFVDRSRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMS 326
Query: 338 -DASQALVTY-------VP-SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI 388
D +A Y +P S +++ D F +I ESLL + D
Sbjct: 327 GDWDEAEKAYLVDFLSKIPTSDIHFALNDPDGF---------RISPKFESLLNFLDSSDQ 377
Query: 389 R---CIIFVERVITAIVLQSLLS-ELLPRHCTWKTKYIAGNNSGIQCQ------SRKKQN 438
R +IFV++ +T + SLLS R Y+ +NS + + Q
Sbjct: 378 REFSGLIFVKQRVTVSAMTSLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQR 437
Query: 439 EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLL 498
+ +++FR G N+I+AT +LEEG+D+ +C++V+ +D + SFIQ RGRAR + S + +
Sbjct: 438 DTLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAI 497
Query: 499 MVKSGDSTT---------QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
M + D++ Q+ +E Y ++ + V + SL + + G +
Sbjct: 498 MFPTDDTSADVSRWQDLEQAMIEAYQDDERQL-QSVSALESLD-EEVMERLTG------D 549
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI-NKEMGIC--TLYLPNNCPIQTVI 606
ST + T +++ ++ +C+ LP Y P F E G+ T+ LP+ +
Sbjct: 550 STSAVLTADMAMAHLHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRR 609
Query: 607 AQGN--IKTLKQA---ACLEACKKLHQIGALTDNLLP 638
+G +T + A +A K L++ G + D+LLP
Sbjct: 610 TEGRRWWRTERAAMKETAFQAYKSLYEFGLVNDHLLP 646
>gi|242078881|ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
gi|241940559|gb|EES13704.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
Length = 291
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 135/248 (54%), Gaps = 8/248 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 1208
+V +E++L Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 26 DVAAIEAVLGYEFADKSLVELALTHGSFYFPYRPGDTYERLEYLGDGVLTCLMSREVFRN 85
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
Y L PG LT +R+A+V+ + A +V GLH+ + H + +L +I + ++ K + S
Sbjct: 86 YRTLPPGPLTRLRAANVDTEKLARVAVDRGLHRFLRHKAPKLQDQICLFIEEMRKYPVHS 145
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+ PK L DI+ESL GAI+ DS N+E V++ R L +P+I ET+ HPV E
Sbjct: 146 N----GLLDPPKVLCDIVESLIGAIYWDSDFNQEEVWRVFRTLADPLIGLETLGKHPVTE 201
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
L E+CQK +K + ++ VEV +G L K+ A+ A K L
Sbjct: 202 LFEFCQKTRRGVK---FVKDEWDKSLKVEVLIDGELVASATYGPKKEIAQNRAAKAALDK 258
Query: 1389 LRASFPGT 1396
L+ + T
Sbjct: 259 LKETLGQT 266
>gi|195996297|ref|XP_002108017.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
gi|190588793|gb|EDV28815.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
Length = 707
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 243/532 (45%), Gaps = 65/532 (12%)
Query: 836 NSLVCTPHNG----QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREP 891
N++V + G + + ++ V ++ +S FT N +TY ++Y+ +Y I + +P
Sbjct: 103 NAMVARNYRGLDTLEWFFVSNVCSDMSPSSKFT-NPDVASTYSEYYKIKYDIDIQDANQP 161
Query: 892 LLNGRRIFHVQNYLSKCRQQKQ---------KEPSKISFELPPELCRIIMAPISLSTFYS 942
LL R + L +Q + S L PELC I + P L ++
Sbjct: 162 LLEVARFKKMHITLLNAKQSGSITHDIRTLSVNSNSNSIVLIPELCLIHVIPAEL--WFL 219
Query: 943 FTFVPSIMHRLQSLLLAVNLKNML-----------LDHCMQNVTIPTIKVLEAITTKKCQ 991
++ +++R++S+LLA L+ +L +D+ + V +LEAIT Q
Sbjct: 220 SQYLALVLYRVESILLAFELRELLRSQANICDIYSVDYLITAVGSAKPCLLEAITLSSAQ 279
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
+ F+LE LE LGD +L Y + + + + + + N L +LG +++P
Sbjct: 280 DHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFRLGAGRRIPY 339
Query: 1052 FIRTESFDP-KMWIIPG--DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG 1108
+I F+ K W+ PG N EL S+ R+ + + K +AD VE LIG
Sbjct: 340 YIVGCPFNQNKSWVPPGFVINQTVSEL---SIAMSREY---THQPLTKKAIADCVEGLIG 393
Query: 1109 AFLSTGGENVGLIFLDRIGIKV----DFVN--VP-YQRQFQVHAERLVNVRHLESLLNYS 1161
G N L F+ +G ++ D + +P + +++E +E++LNYS
Sbjct: 394 YLCLVCGRNSVLRFMRWLGFEISECLDGIQELIPSIDFRTNLYSE---TANSVETILNYS 450
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
FR+ SLL+ ALTH SY E Y++L FLGD +L Y I ++LY +Y P +
Sbjct: 451 FRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLIYQICLFLYTQYTDYQPKDYHLLL 509
Query: 1222 SASVNNDCYALSSVKHGLHKHILHASHELYKRIN-----ITVDSFEKLS----------L 1266
N Y + ++ L K +LH S EL +I+ + D + S +
Sbjct: 510 EYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADDVQSFSSTVQSGCSYKM 569
Query: 1267 GSTFGWE--SVTSF-PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
+T E S+ F PK LGD ++ A+F+D+ + + + I LL P+
Sbjct: 570 KTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDEDTAGRIINSLLNPI 621
>gi|70981901|ref|XP_746479.1| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|66844102|gb|EAL84441.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1384
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 189/418 (45%), Gaps = 65/418 (15%)
Query: 926 ELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTI-PTIKVLEA 984
E C I P +++ F F+ +I+ +L+ L+A L++ +L ++V+ T ++ A
Sbjct: 884 EACTIDRLPFTMAIF--GLFISAIVEQLEIELIATRLRDTIL----RDVSFKSTDHIITA 937
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
I+T + + E LGDS LK++ S QLF + N HEG LS ++ I+ N L K
Sbjct: 938 ISTPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAA 997
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVE 1104
+ L +I T+ + W P L + + V ++++ +K +ADVVE
Sbjct: 998 LDTGLDAYIVTKRLASRKWSAP-------------LISEKLGRVPAKRQMSTKVLADVVE 1044
Query: 1105 ALIGAFLSTGGENVGLI----FLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNY 1160
ALIGA GG + FL I + + A ++N R L+ + Y
Sbjct: 1045 ALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMNDR-LKDHIGY 1103
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
+F D SLLVEALTH S + YQRLE+LGDAVLD +I ++N G +T +
Sbjct: 1104 TFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKI 1163
Query: 1221 RSASVN------------------------NDCYALSSVKHGLH------------KHIL 1244
+ A VN D +A++S + + K
Sbjct: 1164 KHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAAR 1223
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCN 1300
AS ++ + + S L + W +++ K DIIES+ GAIFVDSG N
Sbjct: 1224 DASLARHRALRDEIAS--SLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGN 1279
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 167/697 (23%), Positives = 302/697 (43%), Gaps = 121/697 (17%)
Query: 10 TTEEVSADTLPF-ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL------ 62
+T D P+ RNYQLE LE ++K+N IV A+ L SY L
Sbjct: 3 STVSTCQDASPYQPRNYQLEMLEASMKENIIV-----------AVCSLNSYVKLQNGNDN 51
Query: 63 ------LRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKE 115
+ + +V + + ++ A++ T + K V+ W D + W
Sbjct: 52 DPLDGYRERQNAYVFALCIQQHEVIASNLPAVRTRTLTGLDK------VELWTDQSIWDA 105
Query: 116 EMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLE 174
++ + V+V T +L D L + K++ + +LI DE HH +H IM +FYH L +
Sbjct: 106 VLNGYRVIVSTHAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTK 165
Query: 175 TGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFST 234
+G + +PRI G+TASP+ V S+ Q+ +L+ + C + + +
Sbjct: 166 SGPAAVPRIMGLTASPV---VRSNHQELLMVESNLDAV-------CRTPRLHRQEL---- 211
Query: 235 AKFKFYKYDEIPHALYTHL------ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKI 288
KF + YT + L + L H + ENLD+ + + R + S +
Sbjct: 212 --LKFTHRPHLQQIWYTPTDPAGFRSASLTLGALYH--AWENLDIGD-DPYIQRLRKSPL 266
Query: 289 NSTLL---------YCLSELGVWL--ALKAAETISCYESDFFAWEQLDGFGETIIKKFGS 337
+ L YC +L ++ + E + + ++++ + + + + + S
Sbjct: 267 DDRALKKALLTGKTYCREQLRRFVDRSRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMS 326
Query: 338 -DASQALVTY-------VP-SGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDI 388
D +A Y +P S +++ D F +I ESLL + D
Sbjct: 327 GDWDEAEKAYLVDFLSKIPTSDIHFALNDPDGF---------RISPKFESLLNFLDSSDQ 377
Query: 389 R---CIIFVERVITAIVLQSLLS-ELLPRHCTWKTKYIAGNNSGIQCQ------SRKKQN 438
R +IFV++ +T + SLLS R Y+ +NS + + Q
Sbjct: 378 REFSGLIFVKQRVTVSAMTSLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQR 437
Query: 439 EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLL 498
+ +++FR G N+I+AT +LEEG+D+ +C++V+ +D + SFIQ RGRAR + S + +
Sbjct: 438 DTLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAI 497
Query: 499 MVKSGDSTT---------QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
M + D++ Q+ +E Y ++ + V + SL + + G +
Sbjct: 498 MFPTDDTSADVSRWQDLEQAMIEAYQDDERQL-QSVSALESLD-EEVMERLTG------D 549
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI-NKEMGIC--TLYLPNNCPIQTVI 606
ST + T +++ ++ +C+ LP Y P F E G+ T+ LP+ +
Sbjct: 550 STSAVLTADMAMAHLHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRR 609
Query: 607 AQGN--IKTLKQA---ACLEACKKLHQIGALTDNLLP 638
+G +T + A +A K L++ G + D+LLP
Sbjct: 610 TEGRRWWRTERAAMKETAFQAYKSLYEFGLVNDHLLP 646
>gi|444841769|gb|AGE12617.1| Dicer 2 [Nilaparvata lugens]
Length = 1448
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 168/342 (49%), Gaps = 66/342 (19%)
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L+ +T + F+LE LETLGDSFLKYA S LF + EG L++ K ++I N L
Sbjct: 1039 LQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIKGKVIGNRNLF 1098
Query: 1042 KLGCEQKLPGFIRTESFDPKM-WIIPG---DNSGS-------------YE--LNDDSLFN 1082
G ++ L I+ F+ + WI PG D + YE L+ D +
Sbjct: 1099 YCGEQKGLGSIIKAVEFNTESDWIAPGFCVDRTVQNLFRELNINPRYLYEIPLSRDEIEC 1158
Query: 1083 GR--------------------------KIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 1116
G+ + ++ + +KTV+D VEAL+G ++ + G
Sbjct: 1159 GKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVISNKTVSDSVEALLGLYIQSYGL 1218
Query: 1117 NVG---LIFLDRIGIKVDFVNVPYQRQ-------------FQVHAERLVNVRHLESLLNY 1160
G L +L I K+ +V +++ F +H + +LE L+NY
Sbjct: 1219 EKGFDMLRWLKVIDPKLITPDVYTKKKVEPTILFKGGQIDFHIH-----HPDYLEKLINY 1273
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F++ + L++AL+H +Y I YQRLEFLGDA+LD+L+T ++Y L+PG LTD+
Sbjct: 1274 KFKNRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYEYCDNLTPGELTDL 1333
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE 1262
RSA VNN A +V+ GLHK +L S +L K I V+ E
Sbjct: 1334 RSALVNNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVERQE 1375
Score = 123 bits (308), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 30/297 (10%)
Query: 367 LLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGN 425
++ K++ L+E ++ E + +IFV R + LQ +L +L LP K+ +I G
Sbjct: 262 FVSNKVLKLLELFKGFK--ETDKALIFVTRRFSCKCLQYILEDLKLP---NVKSDFIVGY 316
Query: 426 NSGIQCQSR-----KKQNE-IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
N+ +R KK N+ +++ F G NV++A+ +LEEG+DVQ+CN VI FDP T+
Sbjct: 317 NTNPFNDTREGLLEKKVNKKVLKRFNGGDTNVLIASDVLEEGIDVQTCNTVIKFDPPTTM 376
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS---HASLPCSP- 535
S+IQS+GRAR + S + +M ++ D + ++ + K++ E++ SLP
Sbjct: 377 RSYIQSKGRARTRQSKFYIMTEAKDYKVEGKINKFERLETKLKHELVGKFLERSLPSEKE 436
Query: 536 LNNHMYG---EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF--HINKEMG 590
L N ++ + FY + G S+ ++LI YC L D + TP + ++K+ G
Sbjct: 437 LANSIFKTTIKPFYPLGPDGPKIEGSTPIALINRYCMSLDCDRFSTLTPFWWKEVSKKNG 496
Query: 591 ------ICTLYLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ L LP + P++ VI A N++ K++A L+ACK L+ L D +LP
Sbjct: 497 FNENNIVVYLQLPISSPVRDVIKSDAFPNVELAKRSAALKACKLLYDSRELDDKMLP 553
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 7 ESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP 66
++ EEV D AR+YQ E L A++ N I++L TGSGKT +A M+++ + + K
Sbjct: 14 DTKEKEEVINDEF-VARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMIIKHFGADIEKK 72
Query: 67 ---SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKE 115
A FLV V LV QQA++IK T VG+Y G G D + +E
Sbjct: 73 LSEGGKRAFFLVNTVQLVEQQAQSIKRQTTFTVGEYTGQTGCDLYSTDPQQE 124
>gi|14475569|emb|CAC41974.1| putative RNA dependent RNA polymerase [Dictyostelium discoideum]
Length = 1883
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 240/522 (45%), Gaps = 78/522 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK-----PSPFVAVFLVPK 77
R+YQ+E+ + + NT++ L TG GKTL++IM L + + S +A+FLV +
Sbjct: 32 RDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQDNSCGDSKRIALFLVDR 91
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK-HEVLVMTPQILLDGLRL 136
V LV QQA AI+ T+LKV K +G++ D T SK ++VLV T L++ L +
Sbjct: 92 VPLVTQQAGAIEAITNLKVCKLYGEIN----DSRTRAFVRSKEYDVLVSTVGSLVNLLEV 147
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ + + DE HHA G+H + ++ Y R +T + PRI G+TAS + +
Sbjct: 148 RHLNILDFYFITFDEVHHATGEHDFNKVVD--YIR--KTDLNYRPRILGLTASLV--SIG 201
Query: 197 SSEQDYWQK-IHDLETLMNSKVY------TCASESVLS-NFIPFSTAKFKFYKYDEIPHA 248
+S D Q+ I D+E M S+V+ T +++S L + F T+ + I
Sbjct: 202 NSTIDIVQRSIKDMEERMLSRVFKPTSLLTNSTQSELQPELVSFKTSGQESLIETSICEF 261
Query: 249 LYTHLADELAM------IELKHTR-------SLENLDLNEAQAELIRKKVSKINSTLLYC 295
L ++ + EL + ++L R +LE LD Q E I + +K+ L
Sbjct: 262 LVSN-SKELQIFLNYSDVDLDGVRGNPSFLKALERLDKYSKQLESIYIEYTKVLIELYAL 320
Query: 296 LSELGV-----------WLALKAAETISCYESDFFAWEQLDGFGETIIKKF--GSDASQA 342
LS L L + Y + G E F GS +
Sbjct: 321 LSVLSTEGPKQVLTRLDLLMQSTNQENELYNKLLELRYYISGQYEDRESNFEKGSTRYRK 380
Query: 343 LVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIV 402
L+ S E++I D S L L R ++FVE A
Sbjct: 381 LI----SSLEYAISDASDGELQKDL---------------------RILVFVETRFGASN 415
Query: 403 LQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
L S+L + P TK + G+N G+ +KQ I+ +FR G +IV T++LEEG+
Sbjct: 416 LTSMLKK-EPFQEYLHTKRLVGHN-GVDGMDSEKQQSIIRKFRDGKCRLIVTTNVLEEGI 473
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
DVQ CN+VI +D ++ S IQ RGRAR +N +++ + D
Sbjct: 474 DVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIIIYNDD 515
>gi|188593364|emb|CAO78751.1| Oikopleura cytoplasmic RNAse III enzyme Dicer [Oikopleura dioica]
Length = 1814
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 175/357 (49%), Gaps = 50/357 (14%)
Query: 1036 SNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
SN + L +++LPG + FD +W P D G ++ L + +
Sbjct: 1446 SNQLMSFLDRKKQLPG----DEFDISVWK-PLDTKGKPINTEEPLIYNH----YSDQYLT 1496
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLE 1155
K++AD +EALIGA+L G FL +G+ V + + + + E E
Sbjct: 1497 DKSIADCMEALIGAYLKATGIEATQQFLCYMGLIV-LPSSALDKLTRTYGE-------FE 1548
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LS 1213
+ Y+F++ L+++LTH SY ++ CYQRLEFLGDAVLD+LIT +L++ +P S
Sbjct: 1549 KKIGYTFKNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLDFLITRHLFD-HPTKRFS 1607
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LTD+R+A VNN+ +A +VK HK++ + +L+ I V + + G E
Sbjct: 1608 PGELTDLRAALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRDYVLYCQ--TRQDVEGME 1665
Query: 1274 SV----------------------TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
+V PK LGDI ES+AGAI++DSG N + V+ RP+
Sbjct: 1666 AVLKRIRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVAGAIYLDSGMNLDAVWGVYRPM 1725
Query: 1312 LEPMITPETMR--FHPVRELTEY-CQKNHFSMKKPVASRISGKAAVTVEVQANGRLF 1365
L+ I ++ P+REL E + FS + R GK VTV + N F
Sbjct: 1726 LQKYIDKYSINPPRSPIRELLELEPETAKFSAPE---KRADGKYRVTVHIANNKGRF 1779
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 969 HCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
H ++NV ++L+ +T K + F+LE LE LGD FLKY+ + L+ Y++ HEG LS
Sbjct: 1282 HNIENVGPTPDQILQTLTLSKSSDGFNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLS 1341
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESF----DPKMWIIPG 1067
+ + +SN L +LG +PG + E F W+ PG
Sbjct: 1342 FFRSKKVSNRNLFRLGVYNDIPGRMVAEQFMQNDTGGNWLPPG 1384
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 40/232 (17%)
Query: 431 CQSRKKQNEIVEEFRRGLVNVIVATSILE----EGLDVQSCNLVIMFDPSRTVCSFIQSR 486
+KKQ E + +FR N+++A + E D+ CNLV+ FD S+++
Sbjct: 464 ADEKKKQEEALHKFRTREANILIAQAETENEAHRHFDIPKCNLVVRFD---APGSYLRYD 520
Query: 487 GRARM--QNSD--YLLMVKSGDSTTQSR-------LENYLASGNKMRKEVLSHASLPCSP 535
G R+ Q +D Y +++ + R LE YL + + +E A L C
Sbjct: 521 GGKRLLSQQNDALYGILINKKEKIQFCRMLEEFKMLEEYLKNRASLAEEA-GPAEL-CLD 578
Query: 536 LN-NHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT---PKFHINKE 588
L+ H++ ED YH G + ++ IY SRLP D + + + +
Sbjct: 579 LDVTHLF-EDMPKDYHNNENGAL------INSIY---SRLPCDSFTQLSVLRKTLQLANG 628
Query: 589 MGICTLYLPNNCPIQTV---IAQGNIKTLKQAACLEACKKLHQIGALTDNLL 637
+L LPNN ++ + I + + K++A LEAC KL +G L D L
Sbjct: 629 KFQTSLVLPNNSHLRGILLAIQKKPLNCAKRSAALEACTKLRILGELDDFLF 680
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE LGD L Y +TVYLY KY G L+ RS V+N
Sbjct: 1310 ERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKKVSN 1350
>gi|328716581|ref|XP_003245985.1| PREDICTED: endoribonuclease Dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1489
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 177/386 (45%), Gaps = 72/386 (18%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PE + I + I+++ Y + +H +Q+ + + + L DH + ++ +L+A
Sbjct: 1077 PEDSKYIKSEININ--YKINDSVNEVHGVQTGTFSFDFQPDLNDHPGPSPSV----LLQA 1130
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHE-------------------G 1025
+T + +LE LET+GDSFLKYA + L+ T+ N HE G
Sbjct: 1131 LTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSNLNLYRLG 1190
Query: 1026 LLSVKKERIISNA--------ALCKLGCEQKLPGFIRTESFDPKMWII--------PGDN 1069
L + ER+IS C KL + S +W + P D
Sbjct: 1191 KLKMFGERMISTKFEPHDNWLPPCYF-VPHKLEKALINASIPTTLWNMITLPTFKDPTDK 1249
Query: 1070 S------------GSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
+ ++ + LF + + + K++AD VEALIGA+L + G
Sbjct: 1250 EIEEVIQQFKVGFSNEDIENTPLFVPYNL--VTQHSIPDKSIADCVEALIGAYLISCGAR 1307
Query: 1118 VGLIFLDRIGIKV----DFVNVPYQRQFQVHAERLVN------------VRHLESLLNYS 1161
L+F+ +GI+V D + Y + R V+ E L Y
Sbjct: 1308 GALLFMSWLGIRVLPTLDDSKLGYLKPPSSPLLRNVDDPEGELTKLMDGFESFEQHLGYH 1367
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
F+D S L++A+TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+R
Sbjct: 1368 FQDRSYLLQAMTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLR 1427
Query: 1222 SASVNNDCYALSSVKHGLHKHILHAS 1247
SA VNN +A +V++G HK+ H S
Sbjct: 1428 SALVNNTIFASLAVRNGFHKYFKHLS 1453
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 137/601 (22%), Positives = 250/601 (41%), Gaps = 85/601 (14%)
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
KKQ E + FR+ NV++ T +LE G+D+ CNLVI ++ + S+++S+ RA+ ++
Sbjct: 246 KKQEETLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKSRAKTLDA 305
Query: 495 DYLLMV-KSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV----- 548
Y+LM + S SRL+ Y + + +LSH +L + Y + +
Sbjct: 306 HYILMFDEDATSNILSRLKLY----KDINQMLLSHCTLKDIDMEKETYADRYNWFVTPFK 361
Query: 549 ---ESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNN 599
+ +++++ L+ YC++LPSD + K +P + N+ M +C++ LP N
Sbjct: 362 PGKKEDSAFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKTQSVVYENQPMFVCSIRLPIN 421
Query: 600 CPIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYN 656
PI+ I + K+ A LE C++LH G L D L P I E A +E
Sbjct: 422 SPIKHDIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQP-ITKESFHALFNADEVLP 480
Query: 657 AEHPIYFPPELVNQSPQDTKITYH-----------CYLIELKQHFNYDISARNIVLAMRT 705
P + P K + C +E K Y I N+ +
Sbjct: 481 DAEDALIPWDTEEPRPGTNKRRQYYYKRIAEALNDCRPVENKPCHLYAI-LLNMNCPVPE 539
Query: 706 ELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMD-----HN 760
E + ++++ E G + +KH+ I P C ++L + D H
Sbjct: 540 EQNTRGRRIHPPEESVHGFGILTIKHIPSIPPFP-IYTRCGEVYVSLKPIKTDMFLTQHQ 598
Query: 761 LDKLNEILDGFELRDNLEID--------------YLLLPS----TGQL-IDWKTVATVLF 801
LD + L+ + + L + Y ++P+ +G + IDW + +
Sbjct: 599 LDNIATFLN-YTFTNVLRLQKCHVAFDPTTTHNCYYIVPTLRDASGSIDIDWNFLDNMHK 657
Query: 802 PRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANS 861
RDN N M + + T N Q + + + HLN S
Sbjct: 658 CRDNKLSIITNEDRMNFQPDIDVLKDAVVTPWYRNQ-----EQPQYFYVAEICTHLNPKS 712
Query: 862 LFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYLSK--------- 907
F + + T++ +Y +Y +++ +PLL+ R F Y+++
Sbjct: 713 PFPGSIENYKTFEDYYYLKYSLKIQNLEQPLLDVDHTSARLNFLTPRYMNRKGVILPTSS 772
Query: 908 --CRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNM 965
++ K+ S+ L PELC + + P S+ + +P I++R+ +LLLA ++ +
Sbjct: 773 DATKRAKRDNLSQKQI-LVPELCNVHLFPASM--WRKAVSLPCILYRINALLLADEIRTI 829
Query: 966 L 966
+
Sbjct: 830 V 830
>gi|167046026|gb|ABZ10544.1| dicer-like protein C [Placozoa sp. DMJ-2008]
Length = 352
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 34/342 (9%)
Query: 989 KCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQK 1048
+ ++D +LE LE LGDSFLK+ + LF ++ HEG L+ + +I+ N L KLG
Sbjct: 3 EAEDDINLEGLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNLLKLGKSTP 62
Query: 1049 LPGFIRTESFD---PKMWIIPGDNSGSYELND-----DSLFNGRKIYVTGRKKVKSKTVA 1100
+ +I + F+ + WI PG S ++ + S +G K +K SK++A
Sbjct: 63 ICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDK--AVTHQKFSSKSIA 120
Query: 1101 DVVEALIGAFLSTGGENVGLIFLDRIGIKVDF-VN------VPYQRQFQVHAERLV---- 1149
DV++A++ A L E F+ + + F +N +P + +
Sbjct: 121 DVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDDISSNEINEIYEAN 180
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 1208
N+ LE ++ YSF++ ++ ALTH SY I Q+LEFLGD +L Y+I + +N
Sbjct: 181 NLERLEKVIGYSFQNKLFMIRALTHSSYHHHNIAIESNQKLEFLGDTILQYIIARHFFNS 240
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN-----ITVDSFEK 1263
+P P L D + A VNN C A + G+ K+I S +L++ IN IT D
Sbjct: 241 HPDAKPAKLHDFQEAIVNNKCLADIGIAIGVSKYIFQESPDLFRDINQFVKIITCDYMID 300
Query: 1264 LSLGSTFGWESV-------TSFPKALGDIIESLAGAIFVDSG 1298
+ E++ PK + D++E+L GAI++D+G
Sbjct: 301 DEMNYNDRTEALFENFTEEVKIPKPMSDVVEALIGAIYIDTG 342
Score = 47.4 bits (111), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
+ LE LGD+ L+Y ++ F ++ + L +E I++N L +G + +I E
Sbjct: 219 QKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLADIGIAIGVSKYIFQE 278
Query: 1057 SFDPKMW--------IIPGDNSGSYELNDDSLFNGR--KIYVTGRKKVK-SKTVADVVEA 1105
S P ++ II D Y ++D+ +N R ++ ++VK K ++DVVEA
Sbjct: 279 S--PDLFRDINQFVKIITCD----YMIDDEMNYNDRTEALFENFTEEVKIPKPMSDVVEA 332
Query: 1106 LIGAFLSTGGENVG 1119
LIGA GE++
Sbjct: 333 LIGAIYIDTGESIA 346
>gi|403171947|ref|XP_003331125.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169644|gb|EFP86706.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1453
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 207/444 (46%), Gaps = 66/444 (14%)
Query: 899 FHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLL 958
FHV N LSK + +P +I LP +LC+ P S+ + F+++PS+ L L
Sbjct: 873 FHVLNNLSKS-ESTVVQPHRIL--LPLKLCKGTHIPRSM--WKVFSYLPSLTRLLHDTLQ 927
Query: 959 AVNLKNMLLDHCMQNVTIPTIKVL---EAITTKKCQEDFHLESLETLGDSFLKYAASQQL 1015
A L + + PTI +L +A+T + ++LETLGD+FLK A S +
Sbjct: 928 ATAL--------FKRLDFPTISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHV 979
Query: 1016 FKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYEL 1075
+ ++ EG +S + R + NA L + + LP I ++ P G +
Sbjct: 980 YLSHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASILSQH--PSTRRRQGAPQREFS- 1036
Query: 1076 NDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-- 1133
+K+ + ++DVVEAL+GA TGG +GL +IG +D
Sbjct: 1037 ----------------RKIPKRVLSDVVEALLGAGFLTGGIELGL----KIGTALDLCFG 1076
Query: 1134 -NVPY-QRQFQVHAER----------LVNVRHLESLLNYSFRDPSLLVEALTH---GSYM 1178
P+ +R + E L+ + LE + Y F++ LLV+ALTH S+M
Sbjct: 1077 GTTPWSERPVNIGLESITHDALEPSILLKCQALEKKIGYVFKEKLLLVQALTHRSANSFM 1136
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH- 1237
CY+R E+LGDAV+D I + Y ++ + LT R+ V+N ++K
Sbjct: 1137 T----NCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFLALKKL 1192
Query: 1238 GLHKHILHASHELYKRINITVDSFEKLS-----LGSTFGWESVTSFPKALGDIIESLAGA 1292
GL + I+HAS + +++ + + + V PK L D++E++ GA
Sbjct: 1193 GLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFDPPKILNDVLEAIVGA 1252
Query: 1293 IFVDSGCNREVVFQSIRPLLEPMI 1316
+F+DSG N ++++ + E +I
Sbjct: 1253 VFIDSGFNLHTAYRTLDIIFEDVI 1276
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 116/222 (52%), Gaps = 11/222 (4%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF----VAV 72
DT+ R YQ E LE A K+N I+ +TG+GKT +A+ L+ A + P+ +
Sbjct: 17 DTMKIPRLYQAELLEEAKKRNIIIRADTGTGKTFVALSLITWIA--AQSPANHDDHRIQA 74
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
FL P L QQAE I+ H L+V Y GD+ + W+ W E+++ +V+V T QI D
Sbjct: 75 FLAPTRPLAHQQAEYIQKHCTLRVKAYTGDLQPELWNIDKWHSELNEVDVIVSTAQIFYD 134
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ Y+KL + +LI DE HH R H Y IM YHRL + LP+I G+TASPI
Sbjct: 135 LISKGYWKLEDVSLLIFDEAHHCRKNHIYNQIMRSHYHRLAKDPTVRLPKILGLTASPIW 194
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVY---TCASESVLSNFIP 231
+ D I L++ + +++Y T + NF P
Sbjct: 195 NYKDLERAD--SDIKSLQSALAAQIYEVKTHTEDVCQHNFKP 234
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 368 LTEKIVCLIESLLEYR---GVEDIRCIIFVERVITAIVLQSLLSE-------LLPRHCTW 417
+ K+ L + L+ Y+ ++ CI+FVER A +L LL L P T
Sbjct: 341 FSSKVAVLNKILVSYKEKDNHDNFLCIVFVERRQHAQLLPFLLERNGQLKGFLRP---TA 397
Query: 418 KTKYIAGNNS---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
T + GN + GI+ SR QN+ V +FR G N+ +ATS+ EEGLD +SC +VI FD
Sbjct: 398 LTGHAGGNVNDLIGIKMDSRT-QNKAVAKFRTGEYNLTIATSVAEEGLDFRSCRVVIRFD 456
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
T +IQSRGRAR + SDY++M+ +G TT LE + +++ + +
Sbjct: 457 LITTWKGYIQSRGRARARESDYIVMLPNG--TTNKYLE-FTGKEEQLKAALYNRPEDELI 513
Query: 535 PLNNHMYGEDFYHVESTG--TIATLSSSVSLIYFYCSRLPSDGYFK-PTPKFHIN--KEM 589
+ + G +I T S++ SL+ C +P D + P++ I +
Sbjct: 514 EEGEEEWTPQLICQLAGGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPQYEITWLGDN 573
Query: 590 GICTLYLPNNCPIQ------TVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
C + LP + T +A K K++A EACK L ++ L + LP
Sbjct: 574 FQCQVTLPPMAALHPSQRTFTGLAMATKKDAKRSAAFEACKVLRELDVLNQHFLP 628
>gi|66802840|ref|XP_635263.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60463423|gb|EAL61608.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2403
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 251/544 (46%), Gaps = 82/544 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK-----PSPFVAVFLVPK 77
R+YQ+E+ + + NT++ L TG GKTL++IM L + + S +A+FLV +
Sbjct: 274 RDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQDNSCGDSKRIALFLVDR 333
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK-HEVLVMTPQILLDGLRL 136
V LV QQA AI+ T+LKV K +G++ D T SK ++VLV T L++ L +
Sbjct: 334 VPLVTQQAGAIEAITNLKVCKLYGEIN----DSRTRAFVRSKEYDVLVSTVGSLVNLLEV 389
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKV 195
+ + + DE HHA G+H + ++ + D N PRI G+TAS + +
Sbjct: 390 RHLNILDFYFITFDEVHHATGEHDFNKVVD-----YIRKTDLNFRPRILGLTASLV--SI 442
Query: 196 SSSEQDYWQK-IHDLETLMNSKVY------TCASESVLS-NFIPFSTAKFKFYKYDEIPH 247
+S D Q+ I D+E M S+V+ T +++S L + F T+ + I
Sbjct: 443 GNSTIDIVQRSIKDMEERMLSRVFKPTSLLTNSTQSELQPELVSFKTSGQESLIETSICE 502
Query: 248 ALYTHLADELAM------IELKHTR-------SLENLDLNEAQAELIRKKVSKINSTLLY 294
L ++ + EL + ++L R +LE LD Q E I + +K+ L
Sbjct: 503 FLVSN-SKELQIFLNYSDVDLDGVRGNPSFLKALERLDKYSKQLESIYIEYTKVLIKLYE 561
Query: 295 CLSEL----------GVWLALKAA-ETISCYESDFFAWEQLDGFGETIIKKF--GSDASQ 341
LS L G+ L +++ + Y + G E F GS +
Sbjct: 562 LLSVLSTEGPKQVLTGLDLLMQSTNQENELYNKLLELRYYISGQYEDRESNFEKGSTRYR 621
Query: 342 ALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAI 401
L+ S E++I D S L L R ++FVE A
Sbjct: 622 KLI----SSLEYAISDASDGELQKDL---------------------RILVFVETRSGAS 656
Query: 402 VLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
L S+L + P TK + G+N G +KQ I+ +FR G +IV T++LEEG
Sbjct: 657 NLTSMLKK-EPFQEYLHTKRLVGHN-GDDGMDSEKQQSIIRKFRDGKCRLIVTTNVLEEG 714
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKM 521
+DVQ CN+VI +D ++ S IQ RGRAR +N +++ + D ++ N L+S N +
Sbjct: 715 IDVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIIIYNDDKDL--KILNILSSENLL 772
Query: 522 RKEV 525
+
Sbjct: 773 NNSI 776
>gi|195624966|gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
Length = 329
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 135/242 (55%), Gaps = 8/242 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP-RCYQRLEFLGDAVLDYLITVYLYNK 1208
+V +E+LL Y F D SL+ ALTHGS+ P P Y+RLE+LGD VL L++ ++
Sbjct: 47 DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMSREVFRT 106
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
Y L PG LT +R+A+V+ + A +V GL++ + H + +L +I ++ K + S
Sbjct: 107 YRTLQPGPLTRLRAANVDTEKLARVAVHRGLYRFLRHKAPKLQDQICFFIEEMRKYPVHS 166
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+ PK L DI+ESL GAI++DS ++E V++ R L +P+I ET+ HPV E
Sbjct: 167 N----GLLDPPKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADPLIGLETLGKHPVSE 222
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
L E+CQK H +K + ++ V+V +G + K+ A+ A K+ L
Sbjct: 223 LFEFCQKTHRGVK---FLKDEWDKSLKVQVLIDGEVVGSAIYGPKKEIAQNRAAKDALDK 279
Query: 1389 LR 1390
L+
Sbjct: 280 LK 281
>gi|224064945|ref|XP_002301611.1| predicted protein [Populus trichocarpa]
gi|222843337|gb|EEE80884.1| predicted protein [Populus trichocarpa]
Length = 303
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 118/196 (60%), Gaps = 10/196 (5%)
Query: 1148 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYL 1205
+ ++ +E +L+Y F+ LL EALTH S+ +C Y+RLE++GD+VL+ L T
Sbjct: 51 VTDLDEVEEILHYKFKSKKLLEEALTHASFS----DQCFSYERLEYVGDSVLNLLFTKEQ 106
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
Y YP L PG LT +RSA+V+ + A ++KH LH+++ H L ++I F +
Sbjct: 107 YFLYPDLPPGPLTRLRSANVDTEKLARVAIKHKLHRYLRHKMPLLEEQIR----EFSQAI 162
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHP 1325
L + PKAL DI+E+ GA+F+DS + +VV++ + LLEP+I+ ET++ HP
Sbjct: 163 LDYPLHSNGLVETPKALADIVEAAIGAVFIDSNFSIDVVWKIFKDLLEPIISQETLKVHP 222
Query: 1326 VRELTEYCQKNHFSMK 1341
V EL E CQK + +K
Sbjct: 223 VTELYEVCQKRNLKVK 238
>gi|383862048|ref|XP_003706496.1| PREDICTED: endoribonuclease Dcr-1-like [Megachile rotundata]
Length = 1952
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 161/357 (45%), Gaps = 64/357 (17%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFV-----------------NVP 1136
+ K++AD VEALIGA+L G L+F+ +GI V + + P
Sbjct: 1590 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPMEEICIVQETEPEERIPGSTP 1649
Query: 1137 YQRQFQVHAE-RLVNVRH------------------------------LESLLNYSFRDP 1165
Y + E + +R+ LE + Y F D
Sbjct: 1650 YVKGTNDQGEVTWIQIRYGKLEEPQNPLLRYIPNPEQELLMMLDGYEELEKNIGYKFNDI 1709
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A TH SY ++ CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1710 SYLLQAFTHASYQPNKLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALV 1769
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTF---GWESV----- 1275
NN +A +V+ G HK+ H S L IN + + S+ + G E
Sbjct: 1770 NNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEKCEEAED 1829
Query: 1276 TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEYC 1333
PKALGD+ ESLAGAI++DSG + + V+ +++ I + P+REL E
Sbjct: 1830 VEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYVIMKNEIEQFSTNVPKSPIRELLE-L 1888
Query: 1334 QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ KP + VTV+V G + + + AK A K LK L+
Sbjct: 1889 EPETAKFGKPEKLADGHRVRVTVDVFGKGSF---KGIGRNYRIAKCTAAKCALKKLK 1942
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 137/277 (49%), Gaps = 26/277 (9%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSE----------LLPRHCTWKTKYIAGNNSGIQCQSRK 435
D+ C +IFV++ A VL LL+E L P + + + ++ + K
Sbjct: 431 DLLCGVIFVDKGFVAKVLFYLLNEISAHDEDLEFLSPLYTIERNTDDVSYSKDLEIE-HK 489
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
KQ E++++FR N++++TSILEEG+D+ CN V+ +D +T S++Q + RAR ++
Sbjct: 490 KQEEVLKKFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAIDAL 549
Query: 496 YLLMV-KSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV----ES 550
++L+V K +L Y + + ++ MY H E
Sbjct: 550 HVLLVPKETSKECIWQLAQYHYIEKTLLIKCSNNEPSEEEENEADMYAAMIPHYKPLSED 609
Query: 551 TGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNNCPIQT 604
T +S++SL+ YC++LPSD + + TP++ I N M +C+L LP N P++
Sbjct: 610 DAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIEQINSDNMPMYVCSLRLPINSPVKY 669
Query: 605 VIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
++ N ++ A L+ C LH+ + DNLLP
Sbjct: 670 AVSSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLP 706
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1420 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1479
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1480 YRLGRQKMLGESMIATKFEPHDNWLPP 1506
Score = 44.3 bits (103), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQ+E A +N IV L +T I I L++ +A R+P +++++
Sbjct: 17 REYQVELFYAARDKNIIVCLGKSYEQTFIVIKLIQEFAANNRRPLSEGGKRSLYILTDEE 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+A I+ TDLKV Y +F D + VLV+T ++ L
Sbjct: 77 KCIIKASYIQQLTDLKVLMYTACSSNEFVD------KFETSHVLVLTSEVCTKLLAEKKI 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ I ++I+DECH ++ I+ F +++PRI G+
Sbjct: 131 LPHQINLVIVDECHKFINDNKLKFILQTF------LSCTDVPRIIGLA 172
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1409 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1465
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1466 LSHLRSKQVSN 1476
>gi|328770756|gb|EGF80797.1| hypothetical protein BATDEDRAFT_24696 [Batrachochytrium dendrobatidis
JAM81]
Length = 1641
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 229/524 (43%), Gaps = 86/524 (16%)
Query: 863 FTRNNGSVTTYKKHYEERYGI-QLCFDREPLLNGRRIFHVQN----YLSKCRQQ---KQK 914
FT + V + Y +Y + +C+D+ P ++F Y+++ + Q K
Sbjct: 973 FTGHCDMVLFDRLQYSRKYTVLDVCYDKNPSTVIPKMFKFNTVKSYYMNQLKYQDTIKDD 1032
Query: 915 EPSKISFELPPEL----CRII------------MAPISLSTFYSFTFVPSIMHRLQSLLL 958
+P +PP + R++ + PI + + +P I ++ L
Sbjct: 1033 QPLIRGLSIPPPVQTKQLRLVNHEAYLLPQFLGVYPIKRTHLHQALVLPLITQKIWHYFL 1092
Query: 959 AVNLK-NMLLDHCMQNVT----IPTIKVLE-AITTKKCQEDFHLESLETLGDSFLKYAAS 1012
A ++K L Q T T K+L+ A T+ + E LETLGDSFLK S
Sbjct: 1093 ARDIKYGYGLTLANQAFTGSQFSATPKLLQIATTSSASNMGYSYERLETLGDSFLKIHQS 1152
Query: 1013 QQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGS 1072
LF +EG ++ ++ +I N L + + L FI T+ + W+ P N
Sbjct: 1153 LHLFCRNPFKNEGWMTQQRIKIEKNQVLHQKALDAGLQHFILTKPLTKRNWVPPAKN--- 1209
Query: 1073 YELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRI---GIK 1129
+ +++ +KT+A +EA+IGA + GG + + R+ +
Sbjct: 1210 ---------------IRLNQEISNKTLAGSIEAVIGACVEEGGVEQAALAVSRLLSDEYE 1254
Query: 1130 VDFVNVPYQRQFQVHA--------ERLVNV-----RHLESLLNYSFRDPSLLVEALTHGS 1176
D+ N + + A E +V+V + +E + Y+FRD +LL EALTH
Sbjct: 1255 TDWSNYHHDLYTSIQASPSSTDYYESVVHVDPIATKQIEEQIGYTFRDKTLLWEALTHSG 1314
Query: 1177 YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVK 1236
++ +QRLEFLGDAVL YL +LY P L+PG L+ +R+ V N A S++
Sbjct: 1315 --TGKLGSMFQRLEFLGDAVLSYLAMQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQ 1372
Query: 1237 HGLHKHILHASHELYKRIN---------ITVDSFEKLSLGST--------FGWESVTSFP 1279
GL K+I H + I + +S L + ++ W + P
Sbjct: 1373 IGLVKYIRHTDMTMEAAIGRFTAWVQGYLASESSTPLPISTSATQIASARLFWNKGNTAP 1432
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
K GD+ ES+ GA+FVDS + V QS+ + +I+P RF
Sbjct: 1433 KTAGDVYESMLGAVFVDSQFDIHCV-QSMFDIT--VISPWWWRF 1473
>gi|422398915|ref|NP_001116485.2| endoribonuclease Dicer-1 [Apis mellifera]
Length = 1952
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 162/361 (44%), Gaps = 72/361 (19%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---DFVNV-----PYQR------ 1139
+ K++AD VEALIGA+L G L+F+ +GI V + +N+ P R
Sbjct: 1590 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPKDRIPGSTP 1649
Query: 1140 -----------------------------QFQVHAER-----LVNVRHLESLLNYSFRDP 1165
++ V E L LE + Y F D
Sbjct: 1650 FVKGKNEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKNIGYKFHDI 1709
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1710 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGALTDLRSALV 1769
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWE---------- 1273
NN +A +V+ G HK+ H S L +I ++ F ++ G + E
Sbjct: 1770 NNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSISEEYYLIGEEECE 1825
Query: 1274 --SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVREL 1329
PKALGD+ ESLAGAI++DSG + + V+ +++ I + P+REL
Sbjct: 1826 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIREL 1885
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E + KP + VTV+V G + + + AK A K LK L
Sbjct: 1886 LE-LEPETAKFGKPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRIAKCTAAKCALKKL 1941
Query: 1390 R 1390
+
Sbjct: 1942 K 1942
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 243/1101 (22%), Positives = 438/1101 (39%), Gaps = 207/1101 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKVV 79
R YQ+E A ++ IV L +T + I L++ +A R+ +++++
Sbjct: 17 REYQVELFYAAKDKDIIVCLGKNYEQTFLVIKLIQEFATNNRRLLSQGGKRSLYILTDED 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+A I+ TDLKV + D A + E+ VL+ T + L
Sbjct: 77 KCTIKASYIQQLTDLKV------LLCDTCSTAEFIEKFEISHVLLATSKTCAQLLADKKI 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI-------FGMTASP-- 190
+ I ++I+DECH + Q I+ +N+PRI F +T P
Sbjct: 131 LPHQINLVIVDECHKSINNSQLKFILQTI------LSCNNVPRIIGLAVPLFNLTQEPGR 184
Query: 191 IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-- 248
+ ++ E + ++ +++ Y+ + + + + + I HA
Sbjct: 185 LGLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKSEKGELHITIENHILHAIE 244
Query: 249 -LYTHLADELAMIELKHTRSLENL-DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
L H D + + ++ + D E E+++ LL+ L LG W A +
Sbjct: 245 FLRDHRYDPTEIYNEEFYEDIQKIPDPTEKPFEMMQD--------LLHILETLGPWCADR 296
Query: 307 AAETI----------SCYESDFF------------------AWEQLDGFGETIIKKFGSD 338
AA + + YE + A+E L E I K +
Sbjct: 297 AAFALLILTEKLKIKTPYERHYLLLNMIASVFTKIRALCDNAFEVLSE-KEKIYKYTTTK 355
Query: 339 AS---QALVTYVPSGAEWSIGDDSKFN----------------LDSGLLTEKIVCLIESL 379
Q L TY P + D+K N D + ++K+ C +S
Sbjct: 356 VHRLLQILKTYTPYYTKHINNTDNKINNENISRKFPANNRDSIKDKFMQSKKLDCNWKSS 415
Query: 380 LE----------YRGV--EDIRC-IIFVERVITAIVLQSLLSE----------LLPRHCT 416
E RG+ D+ C +IFV++ A VL LL+E L P +
Sbjct: 416 EENCKKPPVARHMRGITDPDLLCGVIFVDKAFVAKVLFYLLNEISMHDEELHFLSPLYTI 475
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
K + ++ + RK Q E+++ FR N++++TSILEEG+D+ CN V+ +D
Sbjct: 476 EKNIDDISYSKDLEIEHRK-QEEVLKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFP 534
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLASGNKMRKEVLSHASLPCSP 535
+T S++Q + RAR ++ Y+L+V S +L Y + + ++
Sbjct: 535 KTYQSYVQCKSRARAPDALYVLLVSQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEE 594
Query: 536 LNNHMYGEDFYHVE----STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------ 585
MY H + T +S++SL+ YC++LPSD + + TP++ I
Sbjct: 595 NEADMYAAMIPHYKPLDGGDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNID 654
Query: 586 NKEMGICTLYLPNNCPIQTVIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV 642
N M IC+L LP N P++ +++ N ++ A L+ C LH+ + DNLLP I
Sbjct: 655 NILMYICSLRLPINSPVKYIVSSYPMPNKAMARRMAALQLCIDLHRKNEIDDNLLP-IGK 713
Query: 643 EKHDAQKRGNEPYNAEHPIYFPPE----LVNQSPQDTKITYHCY------------LIEL 686
E A+ P +AE P P E P TK + Y +I +
Sbjct: 714 ENFKAK-----PEDAEVPA-LPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGV 767
Query: 687 KQHFNYDISARNIVLA--MRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP----- 739
+ Y I N+VL+ + E + +++ E G + LK + ++ P
Sbjct: 768 PSYL-YHI---NLVLSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRS 823
Query: 740 ----------NQVLLCRRFQITLFRVIMDH---NLDKLNEILDGFELRDNLEIDYLLLP- 785
Q ++ Q+ +++ N+ +L + L F+ + E Y+++P
Sbjct: 824 GEVHVKLKLTKQTIILNEMQVEKIATFLNYTFTNVLRLQQYLMLFDPNAS-ENSYMIVPV 882
Query: 786 ----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC- 840
+ +DW + + R+ G AR K+ K H++++
Sbjct: 883 KLDEQSDIAVDWNFLECIYKNRNIGP-----TKIPEEAR----KNFKFDASKYHDAVIMP 933
Query: 841 ---TPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + +LN S F N+ T++++Y ++Y IQ+ +PLL+
Sbjct: 934 WYRSQDQPQYFYVAEICTNLNPKSSFPGND--YGTFEEYYLKKYDIQIQNLDQPLLDVDH 991
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L ELC I P SL +
Sbjct: 992 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELCAIHPFPASL--WRQ 1049
Query: 943 FTFVPSIMHRLQSLLLAVNLK 963
+P I++R+ +LLLA ++
Sbjct: 1050 AVCLPCILYRINALLLANQIR 1070
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
P + S L + + + L +H + ++ +L+A+T + +LE LET+GDS
Sbjct: 1389 TPKFTYHFDSNLFSFDFQPKLENHPGPSPSL----ILQALTMSNANDGINLERLETIGDS 1444
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP-KMWI 1064
FLKYA + L+ TY N HEG LS + + +SN L +LG ++ L + F+P W+
Sbjct: 1445 FLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWL 1504
Query: 1065 IP 1066
P
Sbjct: 1505 PP 1506
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1409 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1465
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1466 LSHLRSKQVSN 1476
>gi|405966016|gb|EKC31344.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 1018
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 231/527 (43%), Gaps = 49/527 (9%)
Query: 23 RNYQLE-ALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E AL QN I+ TGSGKT +A+ +++ + F+V K L
Sbjct: 322 RQYQNELALPAQRGQNCIIIAPTGSGKTFVAVKIIKHHLENREIQREKKIAFVVEKNNLA 381
Query: 82 PQQAEAIKMHTDLKVGKYWGDM--GVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ+E I H K+ GD DF D A +S+ +V V+T Q+L++ +
Sbjct: 382 TQQSETINRHVTCKLKVVSGDTMRDEDFKDLAVL---LSQFDVFVITAQMLVNAMDKRNL 438
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN--LPRIFGMTASPIKSKVSS 197
++ ++I DECHH G H + M ++ + LE + LP+I G TAS K ++
Sbjct: 439 RIESFSLIIFDECHHCHGGHSFYKTMIPYHDKKLEDPEERIILPQIVGFTASIGVGKANT 498
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
Q ++ ++T+M + + A SV N+ T K D + D+
Sbjct: 499 Q----GQVVNHIKTMM-ANLDADALVSVKENYFELVT---KMNTPDNTILKIPKRKIDQF 550
Query: 258 A------MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETI 311
M++ + +L N L + A + +K N L + ++A +
Sbjct: 551 GAIIKDLMVKTEDCLALANDKLPDKNA--LSPPSTKGNEEYTQWLQTSLMDAGVRADRDL 608
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD-DSKFNLDSGLLTE 370
S + F + L+ + E +I + AS AL + + + I D ++ + + L E
Sbjct: 609 SPFL--FTIRKYLEIYNEALIIHSNARASDALCYILQNIQDLQISDTGTEIEIRAKTLFE 666
Query: 371 KI-----VC---------------LIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSE 409
+ +C L E +LE +R ++R I+FV + A ++ S + E
Sbjct: 667 NVREELNICATDDQKCEENPLLMKLKEIILETHREESNMRGIVFVRTRVVADIIASWMKE 726
Query: 410 LLPRHCTWKTKYIAGNNSGIQCQSRK-KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
KY G S K KQ E +E F +G VIVAT+I EEGLD++ CN
Sbjct: 727 TDELKQIKARKYTGAQARGTDGGSTKSKQRETIELFTKGDFKVIVATTIAEEGLDIEECN 786
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL 515
LV+ +D + + S IQ++GR R NS + ++ + L N L
Sbjct: 787 LVVKYDYAGNLISQIQAKGRGRAVNSRFFILASENKCVAERELTNSL 833
>gi|402588900|gb|EJW82833.1| hypothetical protein WUBG_06256 [Wuchereria bancrofti]
Length = 304
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 151/302 (50%), Gaps = 29/302 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R+YQ+E L+ A K+N IV L TGSGKT IA++L++ Y L P A FLV KV
Sbjct: 16 RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTTKLVTPWKNGGKRAFFLVDKVS 75
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
LV QQA I+ HT L VGK G + D W + A + ++ HEV V+T QI LD L +
Sbjct: 76 LVEQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDTFIALHEVTVLTAQIFLDLLDHGF 135
Query: 139 FKLNMIKVLILDECHHARG-KHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSS 197
F ++ V+I DECHH G KH Y IM HR + + + PRI G+TAS I SK+
Sbjct: 136 FNMSNAAVIIFDECHHVLGSKHPYRLIM----HRYGQLTEVDRPRILGLTASLISSKIPP 191
Query: 198 SEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADEL 257
S ++ + LE +M+S + T S+ + S K +Y + H + +
Sbjct: 192 SNLEHL--LEKLERIMHSSIETA------SDLVCISKYGAKPREYVIMCHDFFCCTCE-- 241
Query: 258 AMIELKHTRSLEN-----LDLNEAQAEL---IRKKVSKINSTLLYCLSELGVWLALKAAE 309
I K +LE+ L E E RK V + S L +LG W A K +
Sbjct: 242 --ISKKVISTLESLRTFCLKCTEFHPEFDVDPRKPVLEAVSRTKSVLEQLGPWCAWKLCQ 299
Query: 310 TI 311
I
Sbjct: 300 VI 301
>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora B]
Length = 1702
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 218/457 (47%), Gaps = 44/457 (9%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK--- 980
P +CR+ A +S F +F +P + HRL + A + L +P I
Sbjct: 908 PQRMCRV--AHLSEDIFRTFHVLPELCHRLTDVWRARTARAEL--------GLPPIADDL 957
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+++A+T F+ + LETLGD+ LK A+ LF Y + HEG L + + + N L
Sbjct: 958 MVQALTLPAAAAGFNNQLLETLGDAVLKLGAAVHLFNKYPHRHEGQLDMLRRTCVCNRTL 1017
Query: 1041 CKLGCEQKLPGFIRTESFDPKMW--IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKT 1098
G E L ++ +E+ + W I P E +D S + Y + ++
Sbjct: 1018 LARGLEHGLEQYLTSETQHIRAWRYIAP-------EGHDPS---DPRPYRHAARSFPRRS 1067
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF--QVHAERLVNV-RHLE 1155
+ D +EA +GA +TGG + L +G+ +P+ ++ ++ A+ + L+
Sbjct: 1068 IQDCMEATLGAAFATGGIQMALRAGTALGLSFGG-PLPWTARYGGRLPAKDASPLFTELQ 1126
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
+L + F+ LL+EA+TH S+ E YQRLEFLGDA++D ++ YLY KYP + G
Sbjct: 1127 EVLGHQFKHGQLLLEAVTHPSFGSYET-TSYQRLEFLGDALIDLVVMRYLYFKYPRATSG 1185
Query: 1216 YLTDMRSASVNNDCYALSSVK-HGLHKHILHASHELYKRINITVDSFEKLSLGSTF--GW 1272
L+ RS +V A +V LHK +L + L I V +++S GW
Sbjct: 1186 QLSWARSRAVCASALAWVAVNCLELHKMMLVNNVGLSVAIGKYVPILKEISNIDIINNGW 1245
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNRE----VVFQSIRPLLEPMITPETMRFHPVRE 1328
+ PKA+ D++ES+ GA+ VD G + E VV ++ LL ++TP+ R P+ E
Sbjct: 1246 KQ--DPPKAISDVLESVLGAVLVDCGYDFEKAAAVVELTMADLLA-VLTPDLPR-DPISE 1301
Query: 1329 LTEYCQKN---HFSMKKPVASRISGKAAVTVEVQANG 1362
L + ++ + ++P R + + ++ G
Sbjct: 1302 LMVWAAQSKCCKITFRRPELKRHDAYSIIAHDIDVVG 1338
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 11/205 (5%)
Query: 13 EVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV 72
E +A+TL R YQ E A + N I L+TGSGKT I+ +L+R + + + V
Sbjct: 7 EETAETL-LPRRYQEEIFSRAQEGNVIAALDTGSGKTYISTLLIR-WISVRDAGQGKIIV 64
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
FLVPKV LV QQ + I HT L+V K+ G +D D W +E+ +VLVMT Q+ L+
Sbjct: 65 FLVPKVALVDQQGDFIAKHTPLRVSKFCGATAIDMADRPGWLKELENVDVLVMTAQLFLN 124
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
L ++ L+ + ++++DECHH R H Y IM E++ L T P+IFGMTASP+
Sbjct: 125 ILTHGHWGLDKVSLMVIDECHHTRKNHAYNGIMREYFQ--LPT--RKRPKIFGMTASPVW 180
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKV 217
+ +D + + LE +++KV
Sbjct: 181 NP-----RDAQESLLTLERNLDAKV 200
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 34/298 (11%)
Query: 369 TEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
+ K+ LI+ L + + + IIFVE+ A L +L + ++ + G+ +G
Sbjct: 361 SPKVRILIDILFD-QYTSTFQGIIFVEQRHVAACLAKMLPRVPQLSHLIRSAQLIGHGTG 419
Query: 429 -------IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
+ + + Q ++V+ FR +N++VATS+ EEGLD +C+LVI FDP + +
Sbjct: 420 NSMYKIRGKGMAVRNQQDVVKLFREKQINLLVATSVAEEGLDFPACDLVIRFDPLQHMVG 479
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
++QSRGRAR Q S +++MV+ G +R + S ++R+ + P N
Sbjct: 480 YLQSRGRARHQTSTFIIMVEQGHEAHIARYRAFSESEPQIRQAYQTRE----EPRNVSDL 535
Query: 542 GEDF----------------YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPT--PKF 583
E+ + V STG + T +S+ L++ C+ +P D F P PK+
Sbjct: 536 SEEVEEGEIIDPQDVAERERFVVPSTGAVLTYTSASGLLHQLCALVPRD-RFTPVALPKY 594
Query: 584 H---INKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
I+ +L LP + T + + K K+AA A K LH + + D LLP
Sbjct: 595 EGDFISTIRLPLSLPLPPEHLVYTGPEKRSKKEAKRAAAFLAVKNLHVLNVIDDYLLP 652
>gi|170181362|gb|ACB11577.1| dicer-1 CG4792-PA-like protein [Apis mellifera]
Length = 1946
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 162/361 (44%), Gaps = 72/361 (19%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---DFVNV-----PYQR------ 1139
+ K++AD VEALIGA+L G L+F+ +GI V + +N+ P R
Sbjct: 1590 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPKDRIPGSTP 1649
Query: 1140 -----------------------------QFQVHAER-----LVNVRHLESLLNYSFRDP 1165
++ V E L LE + Y F D
Sbjct: 1650 FVKGKNEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKNIGYKFHDI 1709
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1710 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGALTDLRSALV 1769
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWE---------- 1273
NN +A +V+ G HK+ H S L +I ++ F ++ G + G E
Sbjct: 1770 NNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSIGEEYYLIGEEECE 1825
Query: 1274 --SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVREL 1329
PKALGD+ ESLAGAI++ SG + + V+ +++ I + P+REL
Sbjct: 1826 EAEDVEVPKALGDVFESLAGAIYLGSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIREL 1885
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E + KP + VTV+V G + + + AK A K LK L
Sbjct: 1886 LE-LEPETAKFGKPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRIAKCTAAKCALKKL 1941
Query: 1390 R 1390
+
Sbjct: 1942 K 1942
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 243/1101 (22%), Positives = 438/1101 (39%), Gaps = 207/1101 (18%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKVV 79
R YQ+E A ++ IV L +T + I L++ +A R+ +++++
Sbjct: 17 REYQVELFYAAKDKDIIVCLGKNYEQTFLVIKLIQEFATNSRRLLSQGGKRSLYILTDED 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+A I+ TDLKV + D A + E+ VL+ T + L
Sbjct: 77 KCTIKASYIQQLTDLKV------LLCDTCSTAEFIEKFEISHVLLATSKTCAQLLADKKI 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI-------FGMTASP-- 190
+ I ++I+DECH + Q I+ +N+PRI F +T P
Sbjct: 131 LPHQINLVIVDECHKSINNSQLKFILQTI------LSCNNVPRIIGLAVPLFNLTQEPGR 184
Query: 191 IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-- 248
+ ++ E + ++ +++ Y+ + + + + + I HA
Sbjct: 185 LGLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKSEKGELHITIENHILHAIE 244
Query: 249 -LYTHLADELAMIELKHTRSLENL-DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK 306
L H D + + ++ + D E E+++ LL+ L LG W A +
Sbjct: 245 FLRDHRYDPTEIYNEEFYEDIQKIPDPTEKPFEMMQD--------LLHILETLGPWCADR 296
Query: 307 AAETI----------SCYESDFF------------------AWEQLDGFGETIIKKFGSD 338
AA + + YE + A+E L E I K +
Sbjct: 297 AAFALLILTEKLKIKTPYERHYLLLNMIASVFTKIRALRDNAFEVLSE-KEKIYKYTTTK 355
Query: 339 AS---QALVTYVPSGAEWSIGDDSKFN----------------LDSGLLTEKIVCLIESL 379
Q L TY P + D+K N D + ++K+ C +S
Sbjct: 356 VHRLLQILKTYTPYYTKHINNTDNKINNENISRKFPANNRDSIKDKFMQSKKLDCNWKSS 415
Query: 380 LE----------YRGV--EDIRC-IIFVERVITAIVLQSLLSE----------LLPRHCT 416
E RG+ D+ C +IFV++ A VL LL+E L P +
Sbjct: 416 EENCKKPPVARHMRGITDPDLLCGVIFVDKAFVAKVLFYLLNEISMHDEELHFLSPLYTI 475
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
K + ++ + RK Q E+++ FR N++++TSILEEG+D+ CN V+ +D
Sbjct: 476 EKNIDDISYSKDLEIEHRK-QEEVLKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFP 534
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS-RLENYLASGNKMRKEVLSHASLPCSP 535
+T S++Q + RAR ++ Y+L+V S +L Y + + ++
Sbjct: 535 KTYQSYVQCKSRARAPDALYVLLVSQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEE 594
Query: 536 LNNHMYGEDFYHVE----STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------ 585
MY H + T +S++SL+ YC++LPSD + + TP++ I
Sbjct: 595 NEADMYAAMIPHYKPLDGGDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNID 654
Query: 586 NKEMGICTLYLPNNCPIQTVIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVV 642
N M IC+L LP N P++ +++ N ++ A L+ C LH+ + DNLLP I
Sbjct: 655 NILMYICSLRLPINSPVKYIVSSYPMPNKAMARRMAALQLCIDLHRKNEIDDNLLP-IGK 713
Query: 643 EKHDAQKRGNEPYNAEHPIYFPPE----LVNQSPQDTKITYHCY------------LIEL 686
E A+ P +AE P P E P TK + Y +I +
Sbjct: 714 ENFKAK-----PEDAEVPA-LPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGV 767
Query: 687 KQHFNYDISARNIVLA--MRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP----- 739
+ Y I N+VL+ + E + +++ E G + LK + ++ P
Sbjct: 768 PSYL-YHI---NLVLSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRS 823
Query: 740 ----------NQVLLCRRFQITLFRVIMDH---NLDKLNEILDGFELRDNLEIDYLLLP- 785
Q ++ Q+ +++ N+ +L + L F+ + E Y+++P
Sbjct: 824 GEVHVKLKLTKQTIILNEMQVEKIATFLNYTFTNVLRLQQYLMLFDPNAS-ENSYMIVPV 882
Query: 786 ----STGQLIDWKTVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC- 840
+ +DW + + R+ G AR K+ K H++++
Sbjct: 883 KLDEQSDIAVDWNFLECIYKNRNIGP-----TKIPEEAR----KNFKFDASKYHDAVIMP 933
Query: 841 ---TPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN--- 894
+ Q + + + +LN S F N+ T++++Y ++Y IQ+ +PLL+
Sbjct: 934 WYRSQDQPQYFYVAEICTNLNPKSSFPGND--YGTFEEYYLKKYDIQIQNLDQPLLDVDH 991
Query: 895 --GRRIFHVQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYS 942
R F Y+++ ++ K + + E L ELC I P SL +
Sbjct: 992 TSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELCAIHPFPASL--WRQ 1049
Query: 943 FTFVPSIMHRLQSLLLAVNLK 963
+P I++R+ +LLLA ++
Sbjct: 1050 AVCLPCILYRINALLLANQIR 1070
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
P + S L + + + L +H + ++ +L+A+T + +LE LET+GDS
Sbjct: 1389 TPKFTYHFDSNLFSFDFQPKLENHPGPSPSL----ILQALTMSNANDGINLERLETIGDS 1444
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP-KMWI 1064
FLKYA + L+ TY N HEG LS + + +SN L +LG ++ L + F+P W+
Sbjct: 1445 FLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWL 1504
Query: 1065 IP 1066
P
Sbjct: 1505 PP 1506
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1409 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1465
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1466 LSHLRSKQVSN 1476
>gi|340386816|ref|XP_003391904.1| PREDICTED: endoribonuclease Dicer-like, partial [Amphimedon
queenslandica]
Length = 380
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 148/344 (43%), Gaps = 83/344 (24%)
Query: 1093 KVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVN------------------ 1134
KV K+VAD VEALIGA GG G+ + GIK++ +
Sbjct: 20 KVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTHSLLL 79
Query: 1135 -----------------------VPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEA 1171
P + L V ++ + YSF++ LL+EA
Sbjct: 80 AESDSIFSSHFRSPPAPKLASKLAPLDKAISTRNRILPQVSSIQGKIEYSFKNELLLIEA 139
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
+TH SY +I CYQRLEFLGDA+LDYL+T ++Y PG +T++RSA V N +A
Sbjct: 140 MTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCNSRFA 199
Query: 1232 LSSVKHGLHKHILHASHELYKRINITVDS------------FEKLSLGSTFGWESVTSF- 1278
++ LH+ + H S L+ + S E++S+ + +
Sbjct: 200 ELAISLNLHRSLCHGSPNLFNDMKKYAQSLKQREKEDRERKLEEMSINDDDSAQVIVESM 259
Query: 1279 ------------------PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET 1320
PK+L D E+LAGA+F+DSG N + V+++ P LEP+
Sbjct: 260 EDGDIDDDEDEDDDIIEPPKSLSDCFEALAGAVFIDSGMNLQTVWETFSPFLEPLFE--- 316
Query: 1321 MRFHPVRELTEYCQ-----KNHFSMKKPVASRISGKAAVTVEVQ 1359
+F LT C+ +KK V S GK+ +E++
Sbjct: 317 -KFKNDPPLTPICELHKLIPKDLEVKKKVLSE--GKSQCIIEIK 357
>gi|315139559|gb|ADT80932.1| dicer-like protein [Nicotiana attenuata]
Length = 111
Score = 137 bits (346), Expect = 3e-29, Method: Composition-based stats.
Identities = 65/110 (59%), Positives = 83/110 (75%)
Query: 1063 WIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIF 1122
W+IPGDNS +++ L K+Y GR+K+KSK VADVVEALIGAFLS+GGE L F
Sbjct: 2 WLIPGDNSQVQNFDEELLMPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSF 61
Query: 1123 LDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEAL 1172
+ +G+ +DFV+ P R F ++AE+LVNVR+LESLL+Y F DPSLLVEAL
Sbjct: 62 MKWLGVDIDFVDAPTPRHFPMNAEKLVNVRYLESLLDYKFHDPSLLVEAL 111
>gi|350631467|gb|EHA19838.1| hypothetical protein ASPNIDRAFT_119009 [Aspergillus niger ATCC
1015]
Length = 1232
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 152/608 (25%), Positives = 256/608 (42%), Gaps = 107/608 (17%)
Query: 105 VDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYAC 163
V+ W D A W +S ++ V T Q+L D L + KL+ + +LI DE HH + H
Sbjct: 28 VEHWKDKAIWDNALSGIKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHCKKDHVANK 87
Query: 164 IMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE-------------QDYWQKIHDLE 210
IM YH+ ++G NLP+I G+TASPI S +SS E + Y+ ++
Sbjct: 88 IMQVHYHKQHQSGVQNLPKILGLTASPILSDLSSLEIVESNLGSICKTPRQYYAQLLQFT 147
Query: 211 T----LMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTR 266
L YT + SV + + DE+P + ++ +LKH R
Sbjct: 148 NRPLILPRLPTYTIPNCSVKAPILEKLCGILS--SEDEVPSS------SKMKSKQLKHIR 199
Query: 267 SLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG 326
+ IN ELG+W A + + F G
Sbjct: 200 RF-------------MQTSESINQ-------ELGIWAATEYMRKSIMH----FKESMRMG 235
Query: 327 FGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGV 385
+T I +G D + ++T + + S + ++ CL++ L + YR
Sbjct: 236 AEKTNISNYGKDFAMEILTRLGKLQDCSPA------IQPEEISPMCQCLLDELSKAYR-- 287
Query: 386 EDIRCIIFVERVITAIVLQSLLSE------------LLPRHCTWKTKYIAGNNSGIQCQS 433
E ++FV + T + L+ L+ + T +K GN I
Sbjct: 288 EGFCGLVFVTQRATVLALKWLIENHPLTSHLFTCGTFIGMSTTQYSKTELGNLHDI---- 343
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
+ Q E +E+FR+G +N+I+ T LEEG+DV +CN V+ F+ ++ SFIQ RGRAR +N
Sbjct: 344 -RNQTETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRGRARREN 402
Query: 494 SDYLLMV--KSGDSTTQ----SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH 547
S +++++ +SG + +E N R+++ P + L+ Y
Sbjct: 403 SQFIIIMEDESGPRYLKRLEMEEIELVQKLQNAERRQI------PANELDFDKYERISLS 456
Query: 548 --VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI---NKEMGICTLYLPNNCP- 601
++ TG + +V +Y +CS+LP+ Y P F N + LP+N
Sbjct: 457 LDIDRTGAQLIMREAVGYLYNFCSKLPAQLYVSNKPLFTYERNNYGRFRAVVKLPSNLDP 516
Query: 602 ----IQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP---------DIVVEKHDAQ 648
+ + +K ++ A L+A K L+Q G + D L+P DI+ H +
Sbjct: 517 SLQSFSSSRSWSRLKYAREDAALQAYKALYQAGLVNDYLVPTQVSDHLEGDIIFRSHYSI 576
Query: 649 KRGNEPYN 656
+ +P+
Sbjct: 577 QNQLDPWQ 584
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 190/434 (43%), Gaps = 71/434 (16%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT-IPTIKVLE-AITTKKCQEDFHLESLETL 1002
F PSI H ++ ++A L+ L +++VT I +L AI + SL +
Sbjct: 810 FTPSISHEVEVYMIAQILRQEL---SLRSVTPWQRIDLLAIAIRPTSIEHRATFRSLAFI 866
Query: 1003 GDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKM 1062
GD+F+KY + QLF + HEGLLS K+R +S+A L + L F+ ++ + K
Sbjct: 867 GDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLNGKR 926
Query: 1063 WIIP---GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
W+ P G S E ++ + + T+AD+ +A++GA + GG N
Sbjct: 927 WVPPLVSGIEPASNE--------------ARQRSIGAATLADMTKAVVGAAFTDGGLNQA 972
Query: 1120 LIFLDRIGIKVDFVNVP------YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALT 1173
+ K+ N Y + +A + +E LL Y+F D SL VE++T
Sbjct: 973 AACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVESMT 1032
Query: 1174 HGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS 1233
H S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 1033 HPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFI 1092
Query: 1234 SV---------------KHGLHKHILHASHELYKRINITVDSF------------EKLSL 1266
++ +H +HK++ S L+ + + D+ EK
Sbjct: 1093 AITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADA 1152
Query: 1267 GSTFGWESVTSFP----KALG------DIIESLAGAIFVDS-----GCNREVVFQSIRPL 1311
WE +P +ALG DII+S+ GA+F+DS C+ I PL
Sbjct: 1153 IKHELWEQ-RFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIVPL 1211
Query: 1312 LEPMITPETMRFHP 1325
LE I+ + HP
Sbjct: 1212 LEHFISHQITTDHP 1225
>gi|380025724|ref|XP_003696618.1| PREDICTED: endoribonuclease Dcr-1-like [Apis florea]
Length = 1966
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 162/361 (44%), Gaps = 72/361 (19%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV---------------DFV--NVP 1136
+ K++AD VEALIGA+L G L+F+ +GI V D + + P
Sbjct: 1591 IPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEISIIQETEPKDRIPGSTP 1650
Query: 1137 YQR--------------------------QFQVHAER-----LVNVRHLESLLNYSFRDP 1165
Y + ++ V E L LE + Y F D
Sbjct: 1651 YVKGKNEKGQTIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKNIGYKFHDI 1710
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1711 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALV 1770
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWE---------- 1273
NN +A +V+ G HK+ H S L +I ++ F ++ G + E
Sbjct: 1771 NNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSISEEYYLIGEEECE 1826
Query: 1274 --SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVREL 1329
PKALGD+ ESLAGAI++DSG + + V+ +++ I + P+REL
Sbjct: 1827 EAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKNEIEQFSTNVPKSPIREL 1886
Query: 1330 TEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSL 1389
E + KP + VTV+V G + + + AK A K LK +
Sbjct: 1887 LE-LEPETAKFGKPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRIAKCTAAKCALKKI 1942
Query: 1390 R 1390
+
Sbjct: 1943 K 1943
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 159/670 (23%), Positives = 288/670 (42%), Gaps = 117/670 (17%)
Query: 383 RGV--EDIRC-IIFVERVITAIVLQSLLSE----------LLPRHCTWKTKYIAGNNSGI 429
RG+ D+ C +IFV++ A VL LL+E L P + K + +
Sbjct: 429 RGITDPDLLCGVIFVDKAFVAKVLFYLLNEISIHDEELHFLSPLYTIEKNIDDISYSKDL 488
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ + RK Q E+++ FR N++++TSILEEG+D+ CN V+ +D +T S++Q + RA
Sbjct: 489 EIEHRK-QEEVLKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRA 547
Query: 490 RMQNSDYLLMVKSGDSTTQS-RLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV 548
R ++ Y+L+V S +L Y + + ++ MY H
Sbjct: 548 RAPDALYVLLVSQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHY 607
Query: 549 E----STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPN 598
+ T +S++SL+ YC++LPSD + + TP++ I N M IC+L LP
Sbjct: 608 KPLDGGDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNIDNILMYICSLRLPI 667
Query: 599 NCPIQTVIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPY 655
N P++ +++ N ++ A L+ C LH+ + DNLLP I E A+ P
Sbjct: 668 NSPVKYIVSSYPMPNKAMARRMAALQLCIDLHRKNEIDDNLLP-IGKENFKAK-----PE 721
Query: 656 NAEHPIYFPPE----LVNQSPQDTKITYHCY------------LIELKQHFNYDISARNI 699
+AE P P E P TK + Y +I + + Y I N+
Sbjct: 722 DAEVPA-LPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYL-YHI---NL 776
Query: 700 VLA--MRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP---------------NQV 742
VL+ + E + +++ E G + LK + ++ P Q
Sbjct: 777 VLSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQT 836
Query: 743 LLCRRFQITLFRVIMDH---NLDKLNEILDGFELRDNLEIDYLLLP-----STGQLIDWK 794
++ Q+ +++ N+ +L + L F+ + E Y+++P + +DW
Sbjct: 837 IILNEMQVEKIATFLNYTFTNVLRLQQYLMLFDPNAS-ENSYMIVPVKLDEQSDIAVDWN 895
Query: 795 TVATVLFPRDNGSKHNMNCSTMFNARIVHT--KSGPLCTCKIHNSLVC----TPHNGQIY 848
+ + R+ G +I K+ K H++++ + Q +
Sbjct: 896 FLECIYKNRNTGP-----------TKIPEETRKNFKFDASKYHDAVIMPWYRSQDQPQYF 944
Query: 849 CITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQN 903
+ + +LN S F N+ T++++Y ++Y IQ+ +PLL+ R F
Sbjct: 945 YVAEICTNLNPKSSFPGND--YGTFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPR 1002
Query: 904 YLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIMHRL 953
Y+++ ++ K + + E L ELC I P SL + +P I++R+
Sbjct: 1003 YVNRKGVALPTSSEETKRAKRENLEQKQILVAELCAIHPFPASL--WRQAVCLPCILYRI 1060
Query: 954 QSLLLAVNLK 963
+LLLA ++
Sbjct: 1061 NALLLANQIR 1070
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 946 VPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDS 1005
P + S L + + + L +H + ++ +L+A+T + +LE LET+GDS
Sbjct: 1390 TPKFTYHFDSNLFSFDFQPKLENHPGPSPSL----ILQALTMSNANDGINLERLETIGDS 1445
Query: 1006 FLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP-KMWI 1064
FLKYA + L+ TY N HEG LS + + +SN L +LG ++ L + F+P W+
Sbjct: 1446 FLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWL 1505
Query: 1065 IP 1066
P
Sbjct: 1506 PP 1507
Score = 43.1 bits (100), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1410 LENHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1466
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1467 LSHLRSKQVSN 1477
>gi|241061224|ref|XP_002408099.1| dicer-1, putative [Ixodes scapularis]
gi|215492368|gb|EEC02009.1| dicer-1, putative [Ixodes scapularis]
Length = 1348
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 174/341 (51%), Gaps = 37/341 (10%)
Query: 333 KKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS----GLLTEKIVCLIESLLEYR--GVE 386
++ + SQ L + + S G D N L T K+ L+E L +R G E
Sbjct: 366 RRVAEEVSQCLDWLQKAQSRLSKGCDPGVNFVEHRLLALATPKLKKLLEVLRVFRPTGPE 425
Query: 387 D---IRCIIFVERVITAIVLQSLLS----ELLP-----RHCTWKTKYIAGNNSGIQCQSR 434
+ + I+FV+ + A VL + L E+ P H +AG ++ S
Sbjct: 426 EDSSLCGIVFVKERVVARVLCAWLGRVAEEVAPYAFVRPHFVVGHGGVAGQSTKESGMSF 485
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
K+Q +++E+FRR N++VATS++EEG+DV C+LV+ FD S++QS+GRAR + S
Sbjct: 486 KQQCKVLEQFRRQECNLLVATSVVEEGMDVPKCSLVVRFDFPPDYRSYVQSKGRARARRS 545
Query: 495 DYLLMVKSGD-----STTQSR--LENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYH 547
YL+MV D S Q+ +E+ L + + RK L + ++ + +
Sbjct: 546 LYLMMVSRDDCQLSCSNLQAYHVVESLLMNKCRERKAPLDSEVVLSFAVDEML--PPYMP 603
Query: 548 VESTGTIA-TLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNNC 600
V+ G T++S++ L+ YC +LPSD + + P + I +KE +CT+YLP
Sbjct: 604 VKRDGAARITMTSAIGLVNRYCVKLPSDIFTRLQPDYTILPVNREDKEYYVCTVYLPMTS 663
Query: 601 PIQTVIAQGNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
P++ I ++T K AA LE CK+LHQ+G L DNLLP
Sbjct: 664 PLKEPIQGQPMETKRYAKMAAALETCKRLHQMGELDDNLLP 704
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 167/380 (43%), Gaps = 83/380 (21%)
Query: 1086 IYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV---------- 1135
+ V +V K+VAD VEALIGA+L G L + +G+++ ++
Sbjct: 973 VPVCTSAQVPDKSVADSVEALIGAYLLVCGPVGALKVMKWMGVRLTQCDLEGGAEGSGVR 1032
Query: 1136 ------PYQRQFQVHA----ERLV--------NVRHLESLLNYSFRDPSLLVEALTHGSY 1177
P Q H E L V +E L Y+F D S L++A+TH SY
Sbjct: 1033 GFWGFPPPQTALLRHVPHPEEDLAALMELMADTVADVERALGYTFVDRSFLLQAVTHASY 1092
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKH 1237
+ CYQRLEFLGDAV+DYL+T YLY +PG LTD+RS+ VNN +A VK+
Sbjct: 1093 YRNRLTDCYQRLEFLGDAVIDYLVTRYLYELPRKFNPGQLTDLRSSLVNNTFFASLVVKY 1152
Query: 1238 GLHKHILHASHELYKRINITVD------------------------SFEKLSLGSTFGWE 1273
GLH H + L+ I V+ F L+ G E
Sbjct: 1153 GLHGCFKHCNPSLFSAIGRFVNYQAQAREEEREEGELPDEDREERQEFPDLN-APLDGAE 1211
Query: 1274 SVTSF---------------------PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL 1312
T + PKALGD+ ESL GA+F+D G + + V++ I +
Sbjct: 1212 DDTYWKVLERHYCHEEECQEPEEVEVPKALGDLFESLMGAVFLDCGMSLDRVWRIIYRMF 1271
Query: 1313 EPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFL 1370
I + + PV+ELTE + F + + G V V++ G+ F + +
Sbjct: 1272 GQEIESFSQNVPVPPVKELTERFRDARFG-----PAELLGNNKVKVQLTVTGKTF--SCV 1324
Query: 1371 DADKKTAKKVACKEVLKSLR 1390
+KK AK K+ L+ ++
Sbjct: 1325 AKNKKLAKMALAKKCLRMVK 1344
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 119/250 (47%), Gaps = 60/250 (24%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
+ +++E E A + NTIV L TG+GKT IA+ML++ +R P FL P V
Sbjct: 113 KRFEVELFEGAKEANTIVCLGTGTGKTFIAVMLIKEMEKDIRVPFEEGGKRTFFLAPTVP 172
Query: 80 LVPQQAEAIKMHTDLKVGKY-------------W-------------------------- 100
LV QQ +AI+ HT L VG Y W
Sbjct: 173 LVAQQQKAIQAHTSLHVGGYIGDMNVDNWDAARWHKEFVNSQVKLLFLPLVAQQQKAIQA 232
Query: 101 ----------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILD 150
GDM VD WD A W +E +VLVMTP+I L ++ L+ + +LILD
Sbjct: 233 HTSLRVGGYIGDMNVDNWDAARWHKEFVNSQVLVMTPEIFKIILHHAFLPLSRVNLLILD 292
Query: 151 ECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKVSSSEQDYWQKIHDL 209
ECH A +H Y IM R ++ + L PR+ G+TAS I SK + ++ ++ K+H L
Sbjct: 293 ECHRAVKQHTYREIM-----RCMDVVEQGLCPRVLGLTASVINSKATEAQVEH--KMHGL 345
Query: 210 ETLMNSKVYT 219
E M S+V T
Sbjct: 346 EMAMRSRVLT 355
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRI 183
MTP+I L ++ L+ + +LILDECH A +H Y IM R ++ + L PR+
Sbjct: 1 MTPEIFKIILHHAFLPLSRVNLLILDECHRAVKQHTYREIM-----RCMDVVEQGLCPRV 55
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN 228
G+TAS I SK + ++ ++ K+H LE M S+V T + ++ +S+
Sbjct: 56 LGLTASVINSKATEAQVEH--KMHGLEMAMRSRVLTVSDQASMSS 98
>gi|426204654|gb|AFY13245.1| dicer-2, partial [Schistocerca gregaria]
Length = 357
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 164/351 (46%), Gaps = 71/351 (20%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-------KNMLLDHCMQ----- 972
PELC II P+S + +PS++H+L L A L K +LD+ M
Sbjct: 9 PELCDII--PLSAALCLKIHLLPSVLHKLTVLAAAYELCQMVPISKGSVLDYEMPENAGD 66
Query: 973 ---------NVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNH 1023
+ V +A+T C + F+ E+LETLGDSFLK+A S LF Y+++H
Sbjct: 67 IQLLNSDFGGCGLTLNDVEQALTAASCDDLFNSETLETLGDSFLKFAVSLFLFIHYKSHH 126
Query: 1024 EGLLSVKKERIISN------AALCKLGCEQKLPGFIRTESFDPKMWIIPGD--------- 1068
EG LS K +++SN A +G + ++ F+ E++ P + +P
Sbjct: 127 EGTLSSIKMKVVSNWHFYNVAKGKDIGSKLQIHRFVPDETWVPPGFTVPQPVRRKFLSEH 186
Query: 1069 ---------NSGSYELNDDSLFNGRKIY----------VTGRKKVKSKTVADVVEALIGA 1109
N E + D L + R + G + V K++AD +EAL G
Sbjct: 187 IAPEYLKKLNPSEIEHSMDQLVDMRNTWNLAMPNNSELFIGVQTVSDKSLADALEALTGV 246
Query: 1110 FLSTGGENVGLIFLDRIGI---KVDFVNVPYQR-----------QFQVHAERLVNVRHLE 1155
+L G + + L+ +G+ K ++ ++R + Q L + LE
Sbjct: 247 YLKAYGLSGAIALLNSLGVLPAKKASPHILFERPPERPLLQESLRHQYLDFHLGDTEELE 306
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
LNY F+D L++ALTH S+ I CYQRLEFLGDA+LD+L+T Y+Y
Sbjct: 307 ETLNYRFKDRGFLLQALTHPSWSDNRITDCYQRLEFLGDAILDFLVTSYIY 357
>gi|357462157|ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 783
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1136 PYQRQFQVHAER-----------LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPR 1184
P Q Q +VH + ++ +E++L Y F++ LL EA TH +Y E
Sbjct: 418 PKQGQEEVHMKESDSLPPPPPPPPPSLHEVEAILEYEFKNILLLEEAFTHCTYGA-ENGL 476
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
Y+RLE++GD+VL+ +IT ++ YP L+PG+LT +R+A+V+ + A ++K+GLH+++
Sbjct: 477 SYERLEYIGDSVLNLMITTEQFHAYPTLAPGHLTRLRAANVDTEKLARVAIKYGLHRYVR 536
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
H L I + + L S + PK L DI+ES GAIFVD G + E V
Sbjct: 537 HKKPLLGDEIQAFIKEVVEYPLHSN----GLIDVPKILADIVESTIGAIFVDCGSSIETV 592
Query: 1305 FQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRL 1364
++ + LL P+I P T++ HP EL E+CQK ++ R K + VEV + L
Sbjct: 593 WKFFKKLLVPVIDPHTIQRHPSAELNEFCQKRGLKLQ----FRDLWKVSEIVEVLISEEL 648
Query: 1365 FEHTFLDADKKTAKKVACKEVLKSLRASF 1393
+ K+ A A K L+ ++ F
Sbjct: 649 VGSGKCGSKKEIAHNRAAKNALEYMKRKF 677
>gi|342879789|gb|EGU81025.1| hypothetical protein FOXB_08500 [Fusarium oxysporum Fo5176]
Length = 580
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 183/405 (45%), Gaps = 66/405 (16%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
VLEA+++ +E + LE LGDS LK+ Q + + + EGLL+ K+R++SN L
Sbjct: 10 VLEAVSSPSAREPVDYQRLEFLGDSILKFCTVTQAYSEHPSWPEGLLNHFKDRLVSNERL 69
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG---RKIYVTGRKKVKSK 1097
++ E+ L FI ++ F W DD L R V G SK
Sbjct: 70 QRVCLEKGLSKFILSKPFTALKW--------RPRYLDDILKEKSAPRPAPVDG-----SK 116
Query: 1098 TVADVVEALIGAFLSTGGENVGL----IFLD------RIGIKVDFVNVPYQRQFQVHAER 1147
T+ADVVEALIGA GG L +FL + G+ D + Q+ +
Sbjct: 117 TLADVVEALIGASYQDGGLTKALKCISVFLGDSCNWHQEGVARDILFAAAPSDVQLPS-- 174
Query: 1148 LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYN 1207
N+ LE L+ Y F+ SLL+EA+THGSY + Y++LEFLGDA+LDY++ ++
Sbjct: 175 --NLEPLEDLIKYKFKKKSLLIEAVTHGSYAAAMQEKSYEQLEFLGDAILDYIVVTKMFQ 232
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA--------------------- 1246
P + G L +++A VN + +L ++ + + + L
Sbjct: 233 HDPPIPTGRLHMIKTAIVNGEFLSLVNLVNSIQRKDLEVRPDGELVTKTTALPLWKFMRF 292
Query: 1247 -SHELYKRINITVDSFEKLSLGSTFGWESVTSFPKAL----------GDIIESLAGAIFV 1295
S E+ + T + FE + +P AL D+ E+L GA++V
Sbjct: 293 NSSEMANVMVETEEKFESMRRELVIALWGDGHYPWALLARLHPQKFYSDMFEALLGAVWV 352
Query: 1296 DSG----CNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKN 1336
DSG C R + + LE +I + HP EL+++ +
Sbjct: 353 DSGSIEECTRVLETFQVMDYLEFVIKEDIHVQHPKEELSKFADRQ 397
>gi|301106324|ref|XP_002902245.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
gi|262098865|gb|EEY56917.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
Length = 2680
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 235/549 (42%), Gaps = 90/549 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+E +AL +NTIV+L TG GKTL+AI +L +L P+ V VF VP LV
Sbjct: 199 RRYQVELTISALLENTIVYLPTGCGKTLVAIKVLDEMKHL--NPNKLV-VFFVPTGPLVS 255
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH---EVLVMTPQILLDGLRLSYF 139
QQA I+ +D +V + G G GA + ++ + L +TPQ L+ L
Sbjct: 256 QQAAYIRRESDFRVKEMSGQHGRT---GAATSDPITVDGDVDALAVTPQYFLNLLFNDRT 312
Query: 140 KLNMIKVLILDECHHARGKHQY-------------------ACIMTEFYHRLLETGD--- 177
K+ V++ DE HHA G H Y A + F + ET
Sbjct: 313 KITDYSVMVFDEAHHATGNHPYCELLKKLATIDLRTRPHILALTASPFGEGVRETSGQTA 372
Query: 178 -SNLPRIFG------------MTASPIKSK---VSSSEQDYWQKIHDLETLMNSKVYTCA 221
+NL R F + AS I + V+ E ++ +K+ + YT
Sbjct: 373 LNNLARAFNAVVNAPTIAAEDLEASFIPKEAQWVTVQESEHERKLREGIKRYIESFYTLI 432
Query: 222 SESVLSNFIPFST-------------AKFKFYKYDEIPHALYTHLADELAMIELKHTRSL 268
+ IPF AK + + A + +E K RSL
Sbjct: 433 RRLMNGQVIPFEGNYDTDDMELSQFLAKLRILREQAEKMARGPKADTDTTGVE-KSKRSL 491
Query: 269 ENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFG 328
+L ELI + + K+ S+ Y LS G A AE + SD A E G
Sbjct: 492 SDL-------ELIFQHLLKVASSF-YNLSIHG---AGTVAEALRRIFSDLEAAESKKG-- 538
Query: 329 ETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE---KIVCLIESLLEYRGV 385
+A V P+ I F L++ T+ ++ + E +
Sbjct: 539 -----------KRAFVLVEPAYRAIMIPALVNFPLETFTGTDISNRVHLVAECIRRANFD 587
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFR 445
+ R I+FV R TAI+L + L T+++ G+NS ++Q ++ FR
Sbjct: 588 HNSRAIVFVRRRKTAILLAKAMEALDVLRELNPTRFV-GHNSYEGMSWEEEQRPTLDRFR 646
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS-GD 504
+G + ++VAT++LEEGLDV C+LVI FD V S IQSRGRAR ++S +++ + G
Sbjct: 647 QGRIRLLVATNVLEEGLDVPECSLVIQFDGVIGVTSLIQSRGRARHRDSSFIIFCSAVGK 706
Query: 505 STTQSRLEN 513
Q +EN
Sbjct: 707 ERNQRLVEN 715
>gi|388330447|gb|AFK29469.1| Dicer1 [Locusta migratoria]
Length = 2324
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 155/337 (45%), Gaps = 73/337 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGI----------KVDFVN-VPYQRQF- 1141
+ K+VAD VEALIGA+L G L+F+ +GI K N VP +R
Sbjct: 1959 IPDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPREEIILKTSSRNAVPKERPVG 2018
Query: 1142 ------------------QVH--------AERLVNV----RHLESLLN----------YS 1161
QV + L NV R LE+LL+ Y
Sbjct: 2019 SLKPTFVYEDSDGTAVWKQVRYGTLQSPSSPLLRNVSNPERKLEALLDGFDVFEQKIQYK 2078
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
FRD S L+++LTH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+R
Sbjct: 2079 FRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLR 2138
Query: 1222 SASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFG-------- 1271
SA VNN +A +V++G HK H S L N VD F ++ G T
Sbjct: 2139 SALVNNTIFASLAVRYGFHKFFRHLSPGL----NEVVDRFVRIQEENGHTISEEYYLIEE 2194
Query: 1272 ----WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HP 1325
PKALGD+ ES+AGAIF+DS + + V++ +++ I + P
Sbjct: 2195 EECEEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWRVYYRMMKLEIEQFSTNVPKSP 2254
Query: 1326 VRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
+REL E + KP + V+VEV G
Sbjct: 2255 IRELLEL-EPETAKFGKPEKLADGRRVRVSVEVFGKG 2290
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 136/319 (42%), Gaps = 82/319 (25%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWK---TKYIAGNNSGIQCQSR------KKQNEIV 441
I+FVE+ TA +L LL+E+ + +Y + + R +KQ E++
Sbjct: 669 IVFVEKKFTAKILYHLLNEIRRNDEDYSFVAPQYTVDKEADPLTEPREAENEHRKQEEVL 728
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
+ FR N++V TS+LEEG+DV CNLVI FD S++QS+GRAR ++ YLLM++
Sbjct: 729 KRFRMRECNLLVGTSVLEEGIDVPKCNLVIRFDVPSMYRSYVQSKGRARAPDAHYLLMIE 788
Query: 502 SGDSTTQSRLENYLAS---------------GNKMRK-----------EVLSHASLPCSP 535
+SR E ++ S NK V+ S P SP
Sbjct: 789 ------ESRTEEFIESLAQYFEIEQLLLRKCANKEPSEEEEMEADKWTNVIDAYSPPASP 842
Query: 536 LNNHMYGEDFYHVESTGTIATLSSSVSLIY-FYCSRLPSDGYFKPTPKFHINKE------ 588
NH + G + S S YC++LPSD + + +P + + E
Sbjct: 843 --NH---SSVNMSTAIGLVNRYSPSCDAAPGVYCAKLPSDTFTRLSPLWSLKTEDIDGKI 897
Query: 589 MGICTLYLPNNCPIQTVIAQGNIKTL-----------------------------KQAAC 619
ICT+ LP N P++ I +TL ++ A
Sbjct: 898 HYICTVRLPINSPVKHNIVADVKRTLYYVRYETFVPICIVKNDTQGLPMPTRVLARRIAA 957
Query: 620 LEACKKLHQIGALTDNLLP 638
LE C+ LHQ L DNL+P
Sbjct: 958 LETCRILHQARELDDNLMP 976
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 31/300 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R +Q+E L+ A ++N IV L + SG+ IA L++ ++ +R+P +V+LV +
Sbjct: 17 REHQVELLDAAKERNIIVCLCSSSGRVFIATKLIQEFSNAIRRPIKNGGKRSVYLVDSMA 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
LV QA I TDL VG+Y +F W++E+ + +VLVMT ++ D +
Sbjct: 77 LVEHQAAYINNLTDLTVGEY-----SEFSSVTDWEKELMEKQVLVMTSKVCSDIISSGIL 131
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++ I VLILDECH+ H IM ++ PRI G+TA + +S
Sbjct: 132 RIEDINVLILDECHNVLQNHPMRKIMRWVSLSPIK------PRILGLTAP-----IFNST 180
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKF------YKYDEIPHALYTHL 253
D + +++ L + + T + S + + + + +F ++ E+ +AL +
Sbjct: 181 ADPGRLEGEMQRLEAALLSTAETASDIVSVLRYCIKPKEFVLECAPHQPGELDNALEEIV 240
Query: 254 ADELAMIELKHTRSLENLDLNEAQAEL-----IRKKVSKINSTLLYCLSELGVWLALKAA 308
D L I+ LE D +E EL + KI + L L LG W A +AA
Sbjct: 241 IDVLNFIQDHRYDPLEVYD-DEFFEELKDIPDPKSDPLKILNEFLDVLHTLGPWCADRAA 299
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +S
Sbjct: 1783 PSI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1841
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG + + F+P W+ P
Sbjct: 1842 NLNLYRLGRRKVFGESMIATKFEPHDNWLPP 1872
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + HLN S F T+ ++Y ++Y IQ+ +++PLL+ R F
Sbjct: 1212 QYFYVAEICSHLNPKSTFP--GSEYKTFDEYYFKKYNIQIQNEKQPLLDVDHTSARLNFL 1269
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
Y+++ ++ K + + E L PELC + P SL + +P I+
Sbjct: 1270 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRKAVCLPCIL 1327
Query: 951 HRLQSLLLAVNLK 963
+R+ +LLLA ++
Sbjct: 1328 YRINALLLADQIR 1340
Score = 41.6 bits (96), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PS++++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1783 PSIILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1839
Query: 1225 VNN 1227
V+N
Sbjct: 1840 VSN 1842
>gi|357619534|gb|EHJ72068.1| putative dicer 1 [Danaus plexippus]
Length = 754
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE+ L Y FRD SLL+ ALTH S + CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 505 LENTLQYRFRDRSLLLTALTHASCHNNTLTDCYQRLEFLGDAILDYLITRHLYEDPRRHS 564
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHAS----HELYKRINITVDSFEKLSLGST 1269
PG LTD+RSA VNN +A + +HG HK+ H S L K + I ++ +S
Sbjct: 565 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTKYVKIQEENGHSISEEHY 624
Query: 1270 FGWESV------TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP--ETM 1321
E PKALGD+ ES+AGAIF+DSG + V++++ LL +
Sbjct: 625 LIQEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLAAVWRAVGGLLRAELDAFSAAA 684
Query: 1322 RFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVA 1381
PVREL E + + KP + V VEV G + + + AK A
Sbjct: 685 PKSPVRELLE-AEPDTAKFGKPERLADGRRVRVCVEVFGRGSF---KGVGRNYRIAKGTA 740
Query: 1382 CKEVLKSLRASFP 1394
+ L+ LR+ P
Sbjct: 741 ARCALRHLRSVRP 753
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 31/150 (20%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLK+A + L+ HEG LS + +
Sbjct: 294 ILQALTMSNANDGINLERLETIGDSFLKFAITAYLYCALPAVHEGKLSHMRSK------- 346
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
G ++ +P++ D++G + +N + + + K++A
Sbjct: 347 ---------QGDVKDGENEPQV-----DSTGCF-----IPYN-----LITQHSIPDKSIA 382
Query: 1101 DVVEALIGAFLSTGGENVGLIFLDRIGIKV 1130
D VEALIGA+L G L+F+ +GI V
Sbjct: 383 DCVEALIGAYLLECGPRGALLFMSWLGITV 412
>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 188/412 (45%), Gaps = 53/412 (12%)
Query: 922 ELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
E+ + C + P S F +PSI+HR ++A L+ LL + + ++ +
Sbjct: 493 EMAAKDCIVDPVPAPYSVFA--LLLPSILHRFGMAIIAETLRTTLLGPVALD-SAHSLLL 549
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
A+ + + + + LE LGD LK+ A+ L E L+ KK RI+SN L
Sbjct: 550 TRALKSSAADGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLA 609
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG---RKKVKSKT 1098
+ L F+ T+SF W + G + TG +++ SK
Sbjct: 610 RATIAAGLDRFMITKSFTGAKWA--------------PRYAGDLLAETGPAVKEERSSKL 655
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAE----RLVNVRHL 1154
+AD++E+LIGA + GG ++ + + +++VP A L+ + L
Sbjct: 656 IADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANSILHEAAPAEADLMGLDVL 715
Query: 1155 ESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSP 1214
E+L+ Y+F+ LL+EALTH S+ P + Y+RLEFLGDAVLDY+I+ L+ P LS
Sbjct: 716 ETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPELSH 775
Query: 1215 GYLTDMRSASVNNDCYAL-------------------SSVKHGLHKHILHASHELYKRIN 1255
+ +R+A+VN A S K + + + S L +
Sbjct: 776 QKMHAIRTATVNASFLAFRLFETTIDEETINKTSMRPESQKRAIWQFLRSGSPSLNANRD 835
Query: 1256 ITVDSFEK--------LSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDS 1297
+ E+ L+ + F W ++T PK L D++ES+ GA+++DS
Sbjct: 836 NALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 887
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 366 GLLTEKIVCLIESLL-EYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYIA 423
G ++ K+ LI+ L+ E + + C++FVE RV A + +E+L H +
Sbjct: 127 GSMSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACI-----AEVLAIHPETRDLLRV 181
Query: 424 GNNSGIQCQSRKK-----------QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
G G S++K Q +E FR G +N+I+ATS+LEEG+DV SC+LV+
Sbjct: 182 GTFVGESENSKRKANIASISEPRNQQATLENFRAGKLNLILATSVLEEGIDVSSCHLVVC 241
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK-EVLSHASL 531
F+ + + SF+Q RGRAR + S Y++ V L G K + L L
Sbjct: 242 FESPKNLKSFVQRRGRARKEESKYVIFVPQAGRRRDPESWQSLEEGMKAAYLDDLRQVKL 301
Query: 532 PCSPLNNHMYGEDFYHVESTGTIATLSS 559
G + V+STGT L +
Sbjct: 302 ATEKEQQSETGHRNFEVKSTGTACALDT 329
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD +L ++ TV+L P +LT + V+N A +++ GL + ++
Sbjct: 564 YQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMIT 623
Query: 1246 ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV- 1304
S K + L T K + DIIESL GA + G + V+
Sbjct: 624 KSFTGAK----WAPRYAGDLLAETGPAVKEERSSKLIADIIESLIGACYTVGGFEKAVLC 679
Query: 1305 FQSIRPLLEPMIT 1317
Q++ P LEP I+
Sbjct: 680 VQTLLP-LEPWIS 691
>gi|302819689|ref|XP_002991514.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
gi|300140716|gb|EFJ07436.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
Length = 569
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 139/276 (50%), Gaps = 25/276 (9%)
Query: 781 YLLLP--STGQLIDWKTV-ATVLFPRDNGSKHNMNCSTMFNARIV--HTKSGPLCTCK-- 833
+LLLP IDW +V AT R S N + S+ + V T + LCT
Sbjct: 110 FLLLPVHDDNDSIDWTSVHATAGVYRTLCS--NFSPSSPIDGDGVGEKTHADMLCTANGY 167
Query: 834 IHNS-----LVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFD 888
+H+S +V T HNG+++C+TGVL + A SL + TY +Y+++Y L
Sbjct: 168 VHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKRG---FTYIDYYKDKYQRTLRLP 224
Query: 889 REPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPS 948
+PLL + N L + ++ + ELPPELC + I S FVPS
Sbjct: 225 DQPLLKAKPTHAFHNLLIRPKEDHGSRQEESFVELPPELC--LCLEIKSGLIRSLYFVPS 282
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
+H+ S + A+ L++ L IP K+LEAIT+KKC E+F ESLE LGDSFLK
Sbjct: 283 FLHQFTSTVCAIQLRSPLWPW------IPAAKILEAITSKKCHEEFSYESLELLGDSFLK 336
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
Y +Q+LF Y HEG LS ++ + ++ G
Sbjct: 337 YVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTG 372
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 112/245 (45%), Gaps = 48/245 (19%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCY--------------- 1230
Y+ LE LGD+ L Y++T L+ Y G L+ R+ +
Sbjct: 324 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLPLIHQ 383
Query: 1231 --ALSSVKHGLH----------KHILHASH------------ELYKRINITVDSFEKLSL 1266
+L S++H L + I HAS EL I V + ++
Sbjct: 384 NASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVELDCEIRKFVQNVKEKPD 443
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
S F E +++ PK LGD++ES+ GAIFVD+ + E +++ + PLL P++TP T+RFHPV
Sbjct: 444 ASCF--EDLSA-PKVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPGTLRFHPV 500
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKAAVT-VEVQANGRLFEHTFLDADKKTAKKVACKEV 1385
R L E C + MK S +A T V V T + +K+AK A ++
Sbjct: 501 RILMELCARQ--GMK---VSFFRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKM 555
Query: 1386 LKSLR 1390
L SL+
Sbjct: 556 LASLQ 560
>gi|312376926|gb|EFR23879.1| hypothetical protein AND_11908 [Anopheles darlingi]
Length = 994
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 136/278 (48%), Gaps = 49/278 (17%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
E L Y F+D S L++A+TH SY + CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 714 FERSLGYHFQDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHS 773
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN------------ITVDSF 1261
PG LTD+RSA VNN +A +V+HG H++ LH S L + I+ IT + +
Sbjct: 774 PGALTDLRSALVNNTIFAALAVRHGFHRYFLHLSPGLQEVIDRFVRIQQENGHRITEEEY 833
Query: 1262 -------------------------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
+ +GS G PKALGD+ ES+AGAIF+D
Sbjct: 834 YLPDEDDDMLAADGGFGGGFGEIEGGQALMGS--GEAEDVEVPKALGDVFESIAGAIFLD 891
Query: 1297 SGCNREVVFQSIRPLLEPMIT--PETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAV 1354
SG + V++ R ++ P I ++ P+REL E + KP + V
Sbjct: 892 SGMSLNTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEM-EPETAKFGKPEKLADGRRVRV 950
Query: 1355 TVEVQANGRLFEHTF--LDADKKTAKKVACKEVLKSLR 1390
TVEV G TF + + + AK A K L+ L+
Sbjct: 951 TVEVFGKG-----TFRGIGRNYRIAKCTAAKCALRQLK 983
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P I +L+A+T + +LE LET+GDSFLKYA + L+ Y N HEG LS + + +S
Sbjct: 377 PAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 435
Query: 1037 NAALCKLGCEQKLPGFIRTESFDP-KMWIIP 1066
N L +LG ++L + F+P W+ P
Sbjct: 436 NLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 466
Score = 42.0 bits (97), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 1187 QRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
+RLE +GD+ L Y IT YLY +Y + G L+ +RS V+N
Sbjct: 396 ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 436
>gi|451996502|gb|EMD88969.1| hypothetical protein COCHEDRAFT_1143131 [Cochliobolus heterostrophus
C5]
Length = 1426
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 196/420 (46%), Gaps = 53/420 (12%)
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITT 987
C + P S + S PSI H+L++ ++A L+ +L +V+ I +L A+T
Sbjct: 907 CVVDNLPASYAILASL--FPSITHKLETYMVANTLRTTILQSVDIDVSHLPILLL-ALTP 963
Query: 988 KKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQ 1047
+ + + + LE LGD LK+ S L T+ EG+L+ KK +++SN L + +
Sbjct: 964 SATEGEENYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKGKLVSNGYLARAALAK 1023
Query: 1048 KLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG---RKKVKSKTVADVVE 1104
L GFI + F W + + + +T +++ SK +ADV+E
Sbjct: 1024 GLDGFILYKRFTGAKW--------------KPRYVSQMLSITNPPTKQERSSKLIADVIE 1069
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA----ERLVNVRHLESLLNY 1160
+LIGA GG + + + +++ +P +A + +V +E+L+ +
Sbjct: 1070 SLIGASYVVGGFSKAFACVKALLPLENWMPIPQANDTLYNAAPEQDSVVGAITVENLVGH 1129
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
+F + +LL+EALTH ++ Y+R EFLGDAVLDY+++ LY+ P L + +
Sbjct: 1130 AFNNKALLLEALTHPTFRGLNTFCSYEREEFLGDAVLDYIVSKRLYSHRPELPHYKMHGI 1189
Query: 1221 RSASVNNDCYALS-------------------SVKHGLHKHILHASHELYKRINITVDSF 1261
R+A VN A S + + L + + SHEL N+ +
Sbjct: 1190 RTAMVNASFLAYSMFETTVEEVFTNKETLQPEAHQKALWQFLRFTSHELVTSRNLAIQRH 1249
Query: 1262 --------EKLSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
E L + F W S+T PK L DI+ES+ GA+++DS + V + +R L
Sbjct: 1250 SEARIQIAEALQHDARFPWHALSLTDPPKFLSDIVESMIGALYIDSHGSLPVCEEFVRRL 1309
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 172/344 (50%), Gaps = 30/344 (8%)
Query: 368 LTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
L+ K+ LI+ ++ E + I+FVE+ + + L+E+L H K G
Sbjct: 376 LSHKVNVLIDIIVAEAVTNSNFTSIVFVEQRVWV----ASLAEILTSHPRTKALLRVGTF 431
Query: 427 SGIQCQSR-----------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
G+ S+ K Q ++++F+ G++N+++ATS+LEEG+D+ SC+LV+ F+
Sbjct: 432 VGMSQSSQHKSSVFNYADPKNQQTVLDDFKAGIINLVLATSVLEEGIDIPSCHLVVCFEA 491
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKS-GDSTTQSRLENYLASGNKMRKEVLSHASLPCS 534
+T+ F+Q RGRAR Q S Y ++V GD + + + A K ++ +L
Sbjct: 492 PKTLKGFVQRRGRARQQRSRYYILVPDMGDVYSATSWQYLEAQMKKAYEDHERQTALRSE 551
Query: 535 PLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGI 591
Y +E+TG + TL +++ +Y +C+RL S Y P+F +IN ++
Sbjct: 552 EECIEEYDSRCLRIETTGALLTLDNAMQHLYHFCARLSSGTYVDARPEFDFTNINGQISA 611
Query: 592 -CTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLPDIVVE-KHD 646
+L + + ++T + KT + A A EA K L+ G + +NLLP I + +H
Sbjct: 612 KASLPISVDLTVRTANSSRTWKTERMAQKDAAFEAYKTLYFAGLVNENLLPVIEEDGEHI 671
Query: 647 A--QKRGNEP--YNAEHPIYFPPELVNQSPQDTKITYHCYLIEL 686
A Q R N+P H I P +++ + Q + +H L+E+
Sbjct: 672 AQYQTRDNQPSLIPVSHTID-PWQVIARYHQTALLEWHSALLEV 714
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Query: 11 TEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV 70
T V+ D + R YQ E + ++K N IV ++TGSGKT IAI R+ + KP V
Sbjct: 16 TVAVTPDEVFHLRGYQAEMIAESMKANIIVVMDTGSGKTHIAIERARAELEMC-KPDKLV 74
Query: 71 AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV--LVMTPQ 128
FL P V L QQ E + + V+ W + + +H V ++ T Q
Sbjct: 75 W-FLAPTVALCEQQYEVFQANLPGYGHLLLCGRDVELWTTQSVWNNVFQHNVRIVISTHQ 133
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
ILLD L + L + +LI DE HH KH IM++FY L LP++ G++A
Sbjct: 134 ILLDALTHGFMSLQRLALLIFDEAHHCTLKHPAHKIMSDFYTPQLTDSTFALPKVLGLSA 193
Query: 189 SPIKSKVSSSE 199
SP+ ++ +
Sbjct: 194 SPVMRAAANKQ 204
>gi|66804721|ref|XP_636093.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60464394|gb|EAL62541.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2417
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 242/522 (46%), Gaps = 78/522 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK-----PSPFVAVFLVPK 77
R+YQ+E+ + + NT++ L TG GKTL++IM L + + S +A+FLV +
Sbjct: 285 RDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQDNSCGDSKRIALFLVDR 344
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK-HEVLVMTPQILLDGLRL 136
V LV QQA AI+ T+LKV K +G++ D T SK ++VLV T L++ L +
Sbjct: 345 VPLVTQQAGAIEAITNLKVCKLYGEIN----DSRTRAFVRSKEYDVLVSTVGSLVNLLEV 400
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ + + DE HHA G+H + ++ Y R +T + PRI G+TAS + +
Sbjct: 401 RHLNILDFYFITFDEVHHATGEHDFNKVVD--YIR--KTDLNYRPRILGLTASLV--SIG 454
Query: 197 SSEQDYWQK-IHDLETLMNSKVY------TCASESVLS-NFIPFSTAKFKFYKYDEIPHA 248
+S D Q+ I D+E M S+V+ T +++S L + F T+ + I
Sbjct: 455 NSTIDIVQRSIKDMEERMLSRVFKPTSLLTNSTQSELQPELVSFKTSGQESLIETSICEF 514
Query: 249 LYTHLADELAM------IELKHTR-------SLENLDLNEAQAELIRKKVSKINSTLLYC 295
L ++ + EL + ++L R +LE LD Q E I + +K+ L
Sbjct: 515 LVSN-SKELQIFLNYSDVDLDGVRGNPSFLKALERLDKYSKQLESIYIEYTKVLIELYAL 573
Query: 296 LSELGV-----------WLALKAAETISCYESDFFAWEQLDGFGETIIKKF--GSDASQA 342
LS L L + Y + G E F GS +
Sbjct: 574 LSVLSTEGPKQVLTRLDLLMQSTNQENELYNKLLELRYYISGQYEDRESNFEKGSTRYRK 633
Query: 343 LVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIV 402
L+ S E++I D S L L +I+ +E+ F +T+++
Sbjct: 634 LI----SSLEYAISDASDGELQKDL---RILVFVETR-------------FGASNLTSML 673
Query: 403 LQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
+ E L TK + G+N G+ +KQ I+ +FR G +IV T++LEEG+
Sbjct: 674 KKEPFQEYL------HTKRLVGHN-GVDGMDSEKQQSIIRKFRDGKCRLIVTTNVLEEGI 726
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD 504
DVQ CN+VI +D ++ S IQ RGRAR +N +++ + D
Sbjct: 727 DVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIIIYNDD 768
>gi|160285502|pdb|2EB1|A Chain A, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285503|pdb|2EB1|B Chain B, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285504|pdb|2EB1|C Chain C, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
Length = 200
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 102/178 (57%), Gaps = 19/178 (10%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
E +NY F++ + L++A TH SY I CYQRLEFLGDA+LDYLIT +LY S
Sbjct: 11 FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 70
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFG 1271
PG LTD+RSA VNN +A +VK+ HK+ S EL+ +D F + L G
Sbjct: 71 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFH----VIDDFVQFQLEKNEMQG 126
Query: 1272 WES-------------VTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
+S PKA+GDI ESLAGAI++DSG + E V+Q P++ P+I
Sbjct: 127 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLI 184
>gi|349603393|gb|AEP99241.1| Endoribonuclease Dicer-like protein, partial [Equus caballus]
Length = 223
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 120/228 (52%), Gaps = 28/228 (12%)
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
CYQRLEFLGDA+LDYLIT +LY SPG LTD+RSA VNN +A +VK+ HK+
Sbjct: 1 CYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 60
Query: 1245 HASHELYKRINITVDSFEKLSL--GSTFGWES-------------VTSFPKALGDIIESL 1289
S EL+ +D F + L G +S PKA+GDI ESL
Sbjct: 61 AVSPELFH----VIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESL 116
Query: 1290 AGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTEY-CQKNHFSMKKPVAS 1346
AGAI++DSG + E+V+Q P++ P+I + PVREL E + FS P
Sbjct: 117 AGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFS---PAER 173
Query: 1347 RISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLRASFP 1394
GK VTVEV G+ + + AK A + L+SL+A+ P
Sbjct: 174 TYDGKVRVTVEVVGKGKF---KGVGRSYRIAKSAAARRALRSLKANQP 218
>gi|384500233|gb|EIE90724.1| hypothetical protein RO3G_15435 [Rhizopus delemar RA 99-880]
Length = 272
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-----KPSPFVAVFLVPK 77
R YQ + + ALK+N I L+TG+GKTLI++ML++ L R + +A FLV +
Sbjct: 91 REYQYDLFQKALKENIITVLDTGAGKTLISVMLIKHMTTLEREARLTRRETKLAFFLVDR 150
Query: 78 VVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
V LV QQA IK + D+ + G+M VD W W+ + +V VMT QI LD L
Sbjct: 151 VPLVFQQASVIKANCDIVLEAICGEMDVDNWSEKRWRLIFEESDVCVMTAQIFLDALYHG 210
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ ++ ++I DECHH KH + IM EFY R P+IFGMTASP+ SK S
Sbjct: 211 FLSIDKAHLIIFDECHHTTKKHPFNLIMREFYDR---CPIEKRPKIFGMTASPMHSKSS 266
>gi|168021275|ref|XP_001763167.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162685650|gb|EDQ72044.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 961
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 39/336 (11%)
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
+EGLD++ CN+VI FD ++TV ++IQSRGRAR SDY+LM++ G+ ++ N S
Sbjct: 24 KEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNLQHEAFFRNAKNSE 83
Query: 519 NKMRKEVLSHASLPCSPLNNHM----YGE-DFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
+RKE + L N + GE + Y V +TG + +++S+V LI+FYCS+LPS
Sbjct: 84 ETLRKEAIERTDLGEKRENAILASIDIGEGEIYQVPATGAVVSMNSAVGLIHFYCSQLPS 143
Query: 574 DGYFKPTPKFHINK---EMGI----CTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKL 626
D Y P+F +NK + G C L LP N P + V + LE +K+
Sbjct: 144 DRYSLLRPEFIMNKIEDQRGAIRYSCRLQLPCNAPFEAVEG-------PEFCVLEGLQKM 196
Query: 627 HQIGALTDNLLPDIVVEKHDAQKRGNE-----PYNAEHPIYFPP---------ELVNQSP 672
H++GA TD LL + + A+ G+E P + H Y+P +V +
Sbjct: 197 HEMGAFTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIADILKGDRIVAEKD 256
Query: 673 QDTKITYHCYLIELKQHFNYDISARNIVLAMRTELE-----SEIKKVNFDLEVERGRLT- 726
DTK L R++ R S++ + +L V R T
Sbjct: 257 SDTKEGSKISLPNPTLLITMSWKKRDLDAIRRFRKRHCCSNSQVLTMTINLFVARTMTTR 316
Query: 727 VNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLD 762
+LK G + L ++ + F + L +++D N++
Sbjct: 317 ASLKFFGDLNLSLQELTELKSFHVRLMSIVLDVNVE 352
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 984 AITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKL 1043
A+T CQE F E E L D++L++ S +LF + + HEG L+ +++I+SN+ L +
Sbjct: 512 ALTAASCQETFSYERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQH 571
Query: 1044 GCEQKLPGFIRTESFDPKMWIIPG 1067
E+ L +I+ + F P W PG
Sbjct: 572 ALEKGLQSYIQADRFAPSRWAAPG 595
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI-- 1243
Y+R E L DA L+++++ L+ K+P G LT MR V+N +++ GL +I
Sbjct: 524 YERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHALEKGLQSYIQA 583
Query: 1244 --LHASHELYKRINITVDSFEKLSLGSTFGWES----VTSFPKALGDIIESLAGAIFVDS 1297
S + D E L G ES + +G + + A A+ ++
Sbjct: 584 DRFAPSRWAAPGVPPAFD--EDLRDGDDSDKESKPEVEREVVEIVGRLTDLRAAAVNNEN 641
Query: 1298 GCNREVVF---------------QSIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKK 1342
V Q PLL+PM++PET+ HPVR L E CQ+ ++
Sbjct: 642 FARVAVKHSYHLHLRHGSTALETQVFEPLLQPMVSPETLPIHPVRGLQERCQQEAEGLEY 701
Query: 1343 PVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
V+ ++ TVEV +G T A KK A+K+ + L L+
Sbjct: 702 KVS---RAESVATVEVYVDGVQIGST-QSAQKKMAQKLGARNALVKLK 745
>gi|38174359|gb|AAH61198.1| Dicer1 protein, partial [Mus musculus]
Length = 421
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 120/222 (54%), Gaps = 13/222 (5%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 83
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 142
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 143 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 196
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
AS + K E + +KI LE ++ S T VL +
Sbjct: 197 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY 236
>gi|116283663|gb|AAH19805.1| Dicer1 protein [Mus musculus]
Length = 427
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 120/222 (54%), Gaps = 13/222 (5%)
Query: 12 EEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR---KPSP 68
+E D + R YQ+E LE AL NTIV L TGSGKT IA++L + A+ +R P
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 93
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTP 127
VFLV V QQ A++ H+DLKVG+Y D+ V+ W W +E +KH+VL+MT
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SDLEVNASWTKERWSQEFTKHQVLIMTC 152
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
+ L L+ Y L+ I +L+ DECH A H Y IM +L E+ S PRI G+T
Sbjct: 153 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIM-----KLCESCPS-CPRILGLT 206
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNF 229
AS + K E + +KI LE ++ S T VL +
Sbjct: 207 ASILNGKCDPEELE--EKIQKLERILRSDAETATDLVVLDRY 246
>gi|350646449|emb|CCD58848.1| ribonuclease III, putative [Schistosoma mansoni]
Length = 928
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 179/387 (46%), Gaps = 58/387 (14%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTY-QNNHEGLLSVKKERIISNAA 1039
++E T ++ LE LE GDSFL + A+ ++ T Q+ EG LS K+ ++SNA
Sbjct: 532 LIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSNAH 591
Query: 1040 LCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
LC + C+ K + ++F P +P Y + ++ ++Y ++ K++
Sbjct: 592 LCDIACDLKWYEYCTGQTFSPPEHFLP----PCYSVASEACKYDPRLYT----RLTDKSL 643
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGI-----------KVDFVNVPYQ---------- 1138
AD+VEALIG FL G + L I K V P+
Sbjct: 644 ADMVEALIGCFLLRSGLSAAFNLLHYFQICPVSWSTLKNDKHYKVEAPWHFFLQPKLYSE 703
Query: 1139 -----------RQFQVHAERLVNVR----HLESLLNYSFRDPSLLVEALTHGSYMLPEIP 1183
R + E ++ + L+ L Y F+ LL EA+TH S + +
Sbjct: 704 LNCGNALNASCRSLHISKEIILELNQRFFQLQEKLGYYFKGIELLAEAMTHQSSINKQYW 763
Query: 1184 RCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
YQRLEFLGD++L ++I+ YL+ K P SPG LT RS V+N A V+H ++ I
Sbjct: 764 GNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTTARSTVVSNINLANVVVEHDIYPFI 823
Query: 1244 ------LHASHELYKRINITVDS-FEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIF 1294
L A + K I+ DS FE++ L + + V+S K L D+ ES+ GAIF
Sbjct: 824 DFGNCSLKACIDDIKSIHRQTDSHFERIELIT----KKVSSGLNVKVLADVFESILGAIF 879
Query: 1295 VDSGCNREVVFQSIRPLLEPMITPETM 1321
VDS N +V I L +T + +
Sbjct: 880 VDSNGNHQVASSIIHRFLGKTMTTQLL 906
>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1431
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 204/488 (41%), Gaps = 89/488 (18%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVL 982
P +C I P + F F+PSI H+++ L +A L +L N+ VL
Sbjct: 912 PIRICHIDRMPAKFAKFA--LFIPSITHKIEVLFIAERLARTVLSRVGFSNLA----HVL 965
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ E+ + E LGDS LK S L HEG+LS K+ I+SN L +
Sbjct: 966 TAISASSAHEENDYQRYEFLGDSLLKLITSIHLVVNNPLWHEGMLSAAKDTIVSNGRLYR 1025
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTG-------RKKVK 1095
L FI T+SF + W R YV+ ++++
Sbjct: 1026 TALNLGLDRFILTKSFTGRKW--------------------RPSYVSQFETVGEEKRELS 1065
Query: 1096 SKTVADVVEALIG-AFLSTGGENV----GLIFLDRIGIKV-DFVNVPYQRQFQV-HAERL 1148
+KT+ADVVE+L+G AFL G E + ++ +R + D V Y+ A
Sbjct: 1066 TKTLADVVESLLGAAFLDGGYEKLEACAKIVLPERAWSSIGDDVRTLYEAALDSDQAAMH 1125
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
+ +E +L Y F PS+L EALTH S + YQRLEFLGD++LD+ + +N
Sbjct: 1126 PKLGQMEEMLGYKFNKPSILFEALTHPSSN--DGAPTYQRLEFLGDSLLDHFVVQEFFNH 1183
Query: 1209 YPGLSPGYLTDMRSASVN----------------------------------NDCYALSS 1234
LS + MR+A VN + Y
Sbjct: 1184 PEKLSHQEMHLMRTAVVNAHFLGFLCQSLYITEQRTEPVSPGKAHLSTISTDHKLYLWQL 1243
Query: 1235 VKHGLHKHILHASHELYKRINITVDSF-EKLSLGSTFGWESV--TSFPKALGDIIESLAG 1291
++HG +++A E R + + L+ T+ W ++ + K D++ES+ G
Sbjct: 1244 MRHGASWEVMNAQQETKTRYEAWGSAVHDALNHSKTYPWAALFRINASKFFSDMVESILG 1303
Query: 1292 AIFVDSGCNREVVFQ-----SIRPLLEPMITPETMRFHPVRELTEYCQKNHFSMKKPVAS 1346
AIFVDS + +V Q + P L +I + HP + E + S K ++S
Sbjct: 1304 AIFVDSRGSMDVSRQFLERIGVLPCLRRIIREKVDCLHPFNHVREAAK----SKKVEISS 1359
Query: 1347 RISGKAAV 1354
KA +
Sbjct: 1360 SAEKKAVI 1367
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 36/311 (11%)
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+I ++ + +++K+ LI ++ D R I+FVE+ T I+L LLS + P
Sbjct: 363 AIAENRVWGSSPDQISQKVEALITTIASKYNPGD-RVIVFVEQRATVIMLAHLLS-VHPL 420
Query: 414 HCTWKTKYIAGNN------SGI-QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
TKY GN+ S I + + Q +++ E R G N+++AT++LEEG+DV +
Sbjct: 421 TKEIVTKYFLGNSNYANRKSAITELSTLSDQRDVLAELRVGKTNILIATNVLEEGIDVPA 480
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGD-------STTQSRLENYLASGN 519
CN+VI FDP + + SFIQ RGRAR + S +L + D + + +L+ A
Sbjct: 481 CNMVICFDPPKDLRSFIQRRGRARDRLSRLVLFMDKNDDDGLAKWAAMEHQLKEIYADNM 540
Query: 520 KMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP 579
+ +E+ + + + + + ST + + ++ + +C+ S Y
Sbjct: 541 RELEEIKALEDI-------EEESAEIFKIPSTEAVLSHQNAQPFLAHFCA-TGSSAYTSN 592
Query: 580 TPKFHINKEM---GICTL----YLPN--NCPIQTVIAQGNIKTLKQA---ACLEACKKLH 627
P++ I+++ G+ + LP+ + ++ ++ +T K A A +A L+
Sbjct: 593 QPEYIIDRQEFAPGLAQIAAKVVLPSYIDPSLRVAFSKSKWQTEKAAKRDAAFQAYVALY 652
Query: 628 QIGALTDNLLP 638
+ G + DNL P
Sbjct: 653 RAGMVDDNLTP 663
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E L +L+QNTIV +ETGSGKT IA+ LR L R + FL P V L
Sbjct: 28 RAYQQEMLAESLRQNTIVAMETGSGKTQIAV--LRIQEELSRCSPEKLVWFLTPTVALAE 85
Query: 83 QQAEAIKMHTDLKVGK-YWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ I L + G VD W W E + ++V TPQ+LLD + + K
Sbjct: 86 QQYAVISKQIPLYQSRLLLGSDNVDHWSTQHIWDEILLNIRIVVSTPQVLLDAMSHGFVK 145
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
L+ + +L+ DE H + + IM YH ++G LP I G+
Sbjct: 146 LSGLSLLVFDEAHRCVKANPFNGIM-RLYHHARKSGADELPAILGL 190
>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1435
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 126/229 (55%), Gaps = 17/229 (7%)
Query: 6 MESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
M+ + VS LP R YQ E A + N I L+TGSGKT I+ +L++ ++ K
Sbjct: 1 MDGIDSLTVSDQLLP--RRYQEEIFVRAQEGNIIAALDTGSGKTFISTLLMK---WIASK 55
Query: 66 P--SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVL 123
P S + +FLVPKV LV QQA I+ T L+VG+ +G D D W+ + + +V+
Sbjct: 56 PAESSKIIIFLVPKVPLVEQQATFIERQTPLRVGQCYGANAWDLTDRGAWRRQFAASDVI 115
Query: 124 VMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRI 183
VMT QI L+ + S++ ++ + +L+ DECHH R H Y IM E++ + P+I
Sbjct: 116 VMTAQIFLNLITHSHWSMDRVSLLVFDECHHTRKNHAYNGIMREYF----QCPGHLRPKI 171
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFIP 231
FGMTASPI + +D + LE M++KV+ ES L + IP
Sbjct: 172 FGMTASPIWNP-----KDAATSLATLEKNMDAKVFAVREHESELLSIIP 215
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 163/353 (46%), Gaps = 47/353 (13%)
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT 416
D + ++D T ++ L E+L+ + + I+FVE+ A+ L LL L
Sbjct: 351 DVVQIDIDIEWCTPQVAALAETLISHYK-PTFQGIVFVEQRHIAVALARLLGRLPELRGR 409
Query: 417 WKTKYIAG-------NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
+ + G N G++ Q Q ++V FRRG +N++VATS+ EEGLD +C+L
Sbjct: 410 VRCADLVGHGGQTTANLKGMEIQG---QQDVVRAFRRGEINLLVATSVAEEGLDFPACDL 466
Query: 470 VIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK------ 523
VI FDP + + ++QSRGRAR S +++MV G R + S +M++
Sbjct: 467 VIRFDPLQHMVGYLQSRGRARHHTSTFVIMVPRGSEQHIMRYRTFADSEPQMKQIYQTQN 526
Query: 524 --EVLSHAS------LPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
E LS S + + Y + ST + T S++ ++ CS +P D
Sbjct: 527 ALEQLSAESDTEEGECEEPEHPEDLAERERYVIPSTLAVLTYHSAIGMLSHLCSLIPRDR 586
Query: 576 YFKPTPKFHINKEMG--ICTLYLPNNCPI--QTVIAQGNIKTLKQ----AACLEACKKLH 627
Y TP H K G TL LP++ P+ + + G +K K+ AA A +KLH
Sbjct: 587 Y---TP-IHQPKYTGEFQVTLQLPSSLPLPPEDLTFVGPLKRSKREAKCAAAFMAVRKLH 642
Query: 628 QIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHPIYFPPELVNQSPQDTKITYH 680
Q+G D LLP +R N+ +AE P P ++ P ++ H
Sbjct: 643 QLGVFDDYLLP---------VRRSND-TDAEDPDGIPIPDISAYPDMLRVAVH 685
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 30/378 (7%)
Query: 935 ISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK---VLEAITTKKCQ 991
+S + +F +P ++HR+ L K Q + +P I ++EA T
Sbjct: 919 MSAYLWRTFHLLPRLLHRVTDLYRVQRAK--------QELGLPPIPDDLLVEAYTLPHTG 970
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
F + LETLGDS LK L ++ HEG L + ++N L L
Sbjct: 971 AGFSNQRLETLGDSVLKLCVIVHLLNRFRRRHEGQLDALRRNAVANRTLLARAHAIGLGS 1030
Query: 1052 FIRTESFDPKMW--IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGA 1109
++ E+ + W ++P + ++ + F R I + + D +EA +GA
Sbjct: 1031 YLTCETMSVRTWRHVVPEEQHTPFD-TTSARFVARSI--------PRRCLQDCMEATLGA 1081
Query: 1110 FLSTGG----ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDP 1165
GG G + +G V + N+ Y R+ + ++ L+Y F +
Sbjct: 1082 AFLGGGIPMALQAGTVLGMSLGGPVPW-NLRYGRK-PIGKTPAALFHRVQEALHYDFHNG 1139
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
LL+EA TH S+ YQRLEFLGDA++D ++ YLY K+P +PG L+ RS +V
Sbjct: 1140 DLLIEASTHPSFESGTF-GSYQRLEFLGDALIDLVVMQYLYRKFPEGTPGQLSWARSRAV 1198
Query: 1226 NNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGD 1284
+ A +V L+K +L + EL + + E S PKAL D
Sbjct: 1199 CSQTMAWVAVTQLELNKIMLVNNSELNIALAKYIPILEDFSAEDIIAKSWKLDPPKALSD 1258
Query: 1285 IIESLAGAIFVDSGCNRE 1302
++ES+ GA+ +D+ + E
Sbjct: 1259 VLESIMGAVLLDTAYDYE 1276
>gi|358332040|dbj|GAA50766.1| dicer-like protein 1 [Clonorchis sinensis]
Length = 774
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 183/393 (46%), Gaps = 65/393 (16%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNH----EGLLSVKKE 1032
PT ++L+A T + +LE LE +GDS L+ + Q+ YQN+ E L+ K+
Sbjct: 376 PT-ELLKATTLLGAADSVNLERLEFIGDSLLQLITTLQV---YQNSSLQADEQQLTNKRS 431
Query: 1033 RIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNS--GSYELNDDSLFNGRKIYVTG 1090
++SNA L + ++ + T FD + IP + Y+ DD +IYV
Sbjct: 432 VLVSNANLYSIVVREQWYRYCTTRPFDIRDLFIPPCYTLKSQYQEPDDP-----RIYV-- 484
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIK-VDFVNVPYQRQ-------FQ 1142
K+ K++AD++EAL+G FL G L R GI +D +N + FQ
Sbjct: 485 --KLTDKSLADMIEALLGCFLQCIGIRGACGLLQRFGISFMDCINDTFNSSASMWRCFFQ 542
Query: 1143 ----------------------VHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP 1180
AE + L+ L Y F++ +LL EA TH SY
Sbjct: 543 DAVCLTNQLSKLTIGSARGDEATKAELDAGISILQGRLGYVFKNQALLHEARTHSSYSSL 602
Query: 1181 EIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLH 1240
+ CYQRLEFLGDAVL Y+++ L+ ++P PG LT+ RS VNN A V LH
Sbjct: 603 KPTVCYQRLEFLGDAVLGYVVSNDLFKRFPDYDPGMLTNHRSLIVNNLVLARVLVDLKLH 662
Query: 1241 KHILHASHELYKRINITVDSFEKLSLGSTFGWE--------SVTSFP-KALGDIIESLAG 1291
I H L VD + L ++T+ P K LGD+ ESL G
Sbjct: 663 DGIRHNIPSLPS----MVDKLRSVRLADVTSLSELREKIQTNITASPMKILGDVFESLIG 718
Query: 1292 AIFVDSGCNREVVFQSI--RPLLEPMITPETMR 1322
A+FVD+ + +V+ Q+I R L + ++T E R
Sbjct: 719 AVFVDTNGDLQVI-QTIVHRLLGKVLMTRERAR 750
>gi|357462179|ref|XP_003601371.1| Ribonuclease 3-like protein [Medicago truncatula]
gi|355490419|gb|AES71622.1| Ribonuclease 3-like protein [Medicago truncatula]
Length = 322
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +L Y F++ LL EALTH +Y Y+RLE++GDAVL+ L+ + YP L
Sbjct: 72 VEEILGYEFKNKQLLEEALTHTTYG---AENDYERLEYVGDAVLNLLMAREQFVSYPNLK 128
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINI-----TVDSFEKLSLGS 1268
PG LT +RS +V+++ A ++ HGL +++ H +L +++++ +++F K
Sbjct: 129 PGILTQLRSKNVDSEKLARVAINHGLDRYLRHKKPQLGEQVSLGIGIGQIEAFTKAIEDY 188
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
PK L D++ES GA+F+D + E+V++ R LLEP+I P T+ HPV E
Sbjct: 189 PIHSNGHIHVPKDLADMVESTIGALFIDCDSSLEIVWKVFRKLLEPIIEPNTVEKHPVSE 248
Query: 1329 LTEYCQKNHFSMK 1341
L E CQK +++
Sbjct: 249 LQEVCQKKKLNLQ 261
>gi|332020119|gb|EGI60563.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1979
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 126/251 (50%), Gaps = 16/251 (6%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE + Y FRD S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1723 ELEKSIGYKFRDSSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQH 1782
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTF 1270
SPG LTD+RSA VNN +A +V+ G HK+ H S L IN + + S+ +
Sbjct: 1783 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEY 1842
Query: 1271 --------GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
PKALGD+ ESLAGAI++DSG + + V+ +++ I +
Sbjct: 1843 YLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTN 1902
Query: 1323 F--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
P+REL E + +P + VTV+V G + + + AK
Sbjct: 1903 VPKSPIRELLE-LEPETAKFGRPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRIAKCT 1958
Query: 1381 ACKEVLKSLRA 1391
A K LK L++
Sbjct: 1959 AAKCALKKLKS 1969
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 32/280 (11%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSE----------LLPRHCTWKTKYIAGNNSGIQCQSRK 435
D+ C +IFV++ TA +L LLSE L P + + G + ++ RK
Sbjct: 441 DLLCGVIFVDKGFTAKILFYLLSEICKHDEDLHFLSPLYTIERNTDDVGYSRDLEMGHRK 500
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q E+++ FR N+++ATSILEEG+D+ CN V+ +D + S+IQ + RAR ++
Sbjct: 501 -QEEVLKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYIQCKSRARAMDAL 559
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVL---SHASLPCSPLNN-HMYGEDFYHVE-- 549
++L+V S LA + K +L S+ L N MY H +
Sbjct: 560 HVLLVPQEAS---KEFIWQLAQYQYIEKTLLLKCSNKELTEDEENEADMYAAMIPHYKPL 616
Query: 550 --STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK------EMGICTLYLPNNCP 601
T +S++SL+ YC++LPSD + + TP++ I M IC L LP N P
Sbjct: 617 DGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWRIETVNIHDIMMYICFLRLPINSP 676
Query: 602 IQTVIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
++ VI N ++ A L+ C LH+ + DNLLP
Sbjct: 677 LKYVITSYPMPNRAMARRMAALQMCIDLHRENEIDDNLLP 716
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1446 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1505
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1506 YRLGRQKMLGESMIATKFEPHDNWLPP 1532
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L +S PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1435 LKGHSGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1491
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1492 LSHLRSKQVSN 1502
>gi|307190121|gb|EFN74275.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 1976
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 126/251 (50%), Gaps = 16/251 (6%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE + Y FRD S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1719 ELEKSIGYKFRDSSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQH 1778
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTF 1270
SPG LTD+RSA VNN +A +V+ G HK+ H S L IN + + S+ +
Sbjct: 1779 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEY 1838
Query: 1271 --------GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
PKALGD+ ESLAGAI++DSG + + V+ +++ I +
Sbjct: 1839 YLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTN 1898
Query: 1323 F--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKV 1380
P+REL E + +P + VTV+V G + + + AK
Sbjct: 1899 VPKSPIRELLE-LEPETAKFGRPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRIAKCT 1954
Query: 1381 ACKEVLKSLRA 1391
A K LK L++
Sbjct: 1955 AAKCALKKLKS 1965
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 151/324 (46%), Gaps = 56/324 (17%)
Query: 350 GAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRC-IIFVERVITAIVLQSLLS 408
GA W KFN D+ T K+ + D+ C +IFV++ TA +L LLS
Sbjct: 414 GANW------KFNDDTCRKTSKL----QRYPCNSADPDLLCGVIFVDKGFTAKILFYLLS 463
Query: 409 ELLPR----HCTWKTKYIAGNNSGIQCQ-----SRKKQNEIVEEFRRGLVNVIVATSILE 459
E+ H I NN + +KQ E+++ FR N+++ATSILE
Sbjct: 464 EICKHDEDLHFLSPLYTIERNNDDVNYSRDLEIEHRKQEEVLKRFRIHECNLLIATSILE 523
Query: 460 EGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV---KSGDSTTQSRLENY-- 514
EG+D+ CN V+ +D + S++Q + RAR ++ ++L+V S D Q Y
Sbjct: 524 EGIDIPKCNFVMRYDFPKNYQSYVQCKSRARAVDALHVLLVPQEASKDFIWQLAQYQYIE 583
Query: 515 ----LASGNKMRKEV------LSHASLP-CSPLNNHMYGEDFYHVESTGTIATLSSSVSL 563
L NK E + A +P PLN G+D V T +S++SL
Sbjct: 584 KTLLLKCSNKELTEEEENEADMYAAMIPHYKPLN----GDDAPKV-------TFNSAISL 632
Query: 564 IYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNNCPIQTVIAQ---GNIKTL 614
+ YC++LPSD + + TP++ I M C+L LP N P++ V+ N
Sbjct: 633 VNRYCAKLPSDTFTRLTPEWSIEVVNIQETIMYTCSLRLPINSPLKYVVTSYPMPNRAMA 692
Query: 615 KQAACLEACKKLHQIGALTDNLLP 638
++ A L+ C LH+ + DNLLP
Sbjct: 693 RRMAALQMCVDLHRENEIDDNLLP 716
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1442 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1501
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1502 YRLGRQKMLGESMIATKFEPHDNWLPP 1528
Score = 43.5 bits (101), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L N+ PSL+++ALT + +RLE +GD+ L Y IT YLY Y + G
Sbjct: 1431 LKNHPGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGK 1487
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1488 LSHLRSKQVSN 1498
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQ+E L A ++N IV L S +T +AI L++ +A R+ ++++
Sbjct: 17 REYQVELLYAAKEKNIIVCLGKNSEQTFLAIKLIQEFATNNRRSISDGGKRTIYILNDED 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
A IK TDLKV ++ +F E + VLV T ++ + S
Sbjct: 77 KCTIIATYIKQLTDLKVLACNSNIFKEF------AEHFERSHVLVGTAKVYAQLISESKL 130
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
I ++I+DECH + ++ F LL +N+PRI G+ A P+
Sbjct: 131 LSCHINLVIVDECHKSIEDSNLKFVLQTF---LL---CNNVPRIIGL-AVPV 175
>gi|240247227|emb|CAX68236.1| dicer-1 [Blattella germanica]
Length = 2271
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 117/225 (52%), Gaps = 21/225 (9%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
E + Y FRD S L+++LTH SY + CYQRLEFLGDAVLDYLIT +LY S
Sbjct: 2018 FERRIRYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHS 2077
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFG 1271
PG LTD+RSA VNN +A +V++G HK+ H S L N VD F ++ G T
Sbjct: 2078 PGALTDLRSALVNNTIFASLAVRYGFHKYFRHLSPGL----NEVVDRFVRIQEENGHTIS 2133
Query: 1272 ------------WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPE 1319
PKALGD+ ES+AGAIF+DSG + + V++ +++ I
Sbjct: 2134 EEYYLIEEEECEEAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRMMKSEIEQF 2193
Query: 1320 TMRF--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
+ P+REL E + KP + VTVEV G
Sbjct: 2194 STNVPKSPIRELLEL-EPETAKFGKPEKLADGRRVRVTVEVFGKG 2237
Score = 123 bits (308), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 11/202 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKP---SPFVAVFLVPKVV 79
R YQ+E L+ A ++N IV L TGSGK IA L++ A +R+P +++V V
Sbjct: 17 REYQVELLDAAKERNIIVCLATGSGKIFIATKLIQELANAVRRPFHKDGKRTLYVVDTVA 76
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
+V QQA I+ TDL VG+Y V+ WD W++E +++VLVMT QI LD + SY
Sbjct: 77 MVAQQASYIRHLTDLTVGEYVSSEAVEMWDNEDWEQEFLENQVLVMTSQICLDIMECSYL 136
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++N + ++ILDECH A +H IM E+ + PRI G+TA + S
Sbjct: 137 QMNYLNLIILDECHRALREHPIRQIMKEYITCCEK------PRILGLTAPLLNSTCDPGR 190
Query: 200 QDYWQKIHDLETLMNSKVYTCA 221
+ +I LE +++S T +
Sbjct: 191 LE--GEIRRLELVLHSSAETAS 210
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 140/273 (51%), Gaps = 27/273 (9%)
Query: 391 IIFVERVITAIVLQSLLSEL----------LPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
I+FV+ TA +L LL++L + ++ K + + + RK Q E+
Sbjct: 662 IVFVDHRFTAKILYHLLNDLRRFDEDFTFLMAQYTVDKVADPISDPREAEIEHRK-QEEV 720
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
++ FR N++V TS+LEEG+DV CNLVI F+ + S++QS+GRAR Q++ Y+LM+
Sbjct: 721 LKRFRMRECNLLVGTSVLEEGIDVPKCNLVIHFNVPQVYRSYVQSKGRARAQDAYYILMI 780
Query: 501 KSGDSTTQ--SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE---DFYHVESTGTIA 555
+ D + Q + L Y + ++ + Y + + +S + +
Sbjct: 781 EE-DRSKQFVNDLAQYFEIEQMLLRKCANREPTEEEESEADKYTDLIPSYCPSDSPNSPS 839
Query: 556 -TLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG------ICTLYLPNNCPIQTVIAQ 608
++++V+L+ YC++LPSD + + TP +++ ICT+ LP N P++ I
Sbjct: 840 VNMATAVALVNRYCAKLPSDTFTRLTPMWNVKTTSDNGLISFICTVRLPINSPVKQDIVG 899
Query: 609 GNIKT---LKQAACLEACKKLHQIGALTDNLLP 638
+ + ++ A LE CK LH+ L DNL+P
Sbjct: 900 LPMPSRVLARRIAALETCKVLHKTQELDDNLMP 932
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1729 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1788
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG + + F+P W+ P
Sbjct: 1789 YRLGRRKVFGESMIATKFEPHDNWLPP 1815
Score = 44.7 bits (104), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 846 QIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFH 900
Q + + + GHLN S F T+ ++Y ++Y IQ+ ++PLL+ R F
Sbjct: 1167 QYFYVAEICGHLNPKSTFP--GSEYKTFDEYYFKKYNIQIQNSKQPLLDVDHTSARLNFL 1224
Query: 901 VQNYLSK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIM 950
Y+++ ++ K + + E L PELC + P SL + +P I+
Sbjct: 1225 TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL--WRKAVCLPCIL 1282
Query: 951 HRLQSLLLAVNLK 963
+R+ +LLLA ++
Sbjct: 1283 YRINALLLADQIR 1295
Score = 41.2 bits (95), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PS++++ALT + +RLE +GD+ L Y IT YLY Y + G L+ +RS
Sbjct: 1726 PSVILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1782
Query: 1225 VNN 1227
V+N
Sbjct: 1783 VSN 1785
>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1520
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 3 PVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
P + T VS LP RNYQ E A + N I L+TGSGKT I+I+L++ + L
Sbjct: 10 PAPDSTTTAAAVSESLLP--RNYQEEIFRRAQEGNVIAALDTGSGKTFISILLIK-WMVL 66
Query: 63 LRKPSPFVAVFLVPKVVLVPQQAEAIKMHT--DLKVGKYWGDMGVDFWDGATWKEEMSKH 120
V VFLVPKV LV QQA I HT +V K+ G + +D D W++
Sbjct: 67 QEHARDKVIVFLVPKVALVEQQASFISKHTPSSFRVKKFHGSLDLDLADRGNWQKSFEGS 126
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
+V+VMT QI L+ L S++ + + +LI DECHH R H Y +M E++ L T +
Sbjct: 127 DVVVMTAQIFLNILTHSHWSIEKVSLLIFDECHHTRKNHAYNGVMREYF--TLST--VHR 182
Query: 181 PRIFGMTASPI 191
P++FGMTASPI
Sbjct: 183 PKVFGMTASPI 193
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 148/306 (48%), Gaps = 43/306 (14%)
Query: 371 KIVCLIESLLEYRGVE--DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSG 428
K+ L++ LLE+ I+FVE+ A+ L +L + + + G+ +G
Sbjct: 397 KVKALVDVLLEHHSASPGSFHGIVFVEQRHVAMCLAKILPRIPELREHIRCAELVGHGTG 456
Query: 429 IQ--------CQSR----KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
Q Q+R +Q +IV FR G +N+++ATS+ EEGLD +C++V+ FDP
Sbjct: 457 HQHKKNQPPTAQARGMGLARQQDIVRSFREGKLNLLIATSVAEEGLDFPACDIVVRFDPV 516
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP---- 532
+ ++QSRGRAR + S +++MV++G T + R N S +++K S LP
Sbjct: 517 HHMVGYVQSRGRARTKTSAFVIMVQAGYDTHRERYRNLSESEPELKKVYQSREQLPQPEP 576
Query: 533 -------------CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK- 578
P + + + Y V STG T S++ L+ + CS LP D Y +
Sbjct: 577 EPSSESEEGEVEEEDPAD--IAVRERYVVPSTGAALTYGSAIGLVNYLCSLLPHDQYTEP 634
Query: 579 PTPKFHINKEMGICTLYLPNN--CPIQTVIAQGNI----KTLKQAACLEACKKLHQIGAL 632
PTPK+ + TL LP + P+ +G I + K+A A K+LH++
Sbjct: 635 PTPKYFGDY---AATLDLPASLPLPLDKRRFRGPIRRSKREAKRAVAFMAVKELHKLNVF 691
Query: 633 TDNLLP 638
D LLP
Sbjct: 692 DDYLLP 697
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 197/428 (46%), Gaps = 41/428 (9%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK--- 980
P + CRI+ P + + +F +P + RL + A + L +P I
Sbjct: 956 PRDCCRIVHFPPHI--YNAFHLLPKVCRRLTDVYRAQAQRFEL--------GLPPIADDL 1005
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
++EA + ++ + ETLGDS LK + + Y + HEG LS ++ +SN L
Sbjct: 1006 LIEAASLPTTLHTWNNQRFETLGDSVLKLGVTVHIMNKYPHRHEGQLSKLRQSSVSNRTL 1065
Query: 1041 CKLGCEQKLPGFIRTESFDPKMW--IIPGD---------NSGSYELNDDSLFNGRKIYVT 1089
E L F+ +E+ + W + P + +G+ E + S R+
Sbjct: 1066 LARAKEIGLEIFLNSETQSLQSWRYVHPSECTASASAALTAGTAE-SPSSKAPARR---- 1120
Query: 1090 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY-QRQFQVHAERL 1148
+++ +++ D +EA +GA GG ++ L +G+ +P+ R +V
Sbjct: 1121 AKREFPRRSLQDCMEATLGAAFYHGGMDMALRAGTALGLSFGG-ELPWCARYGRVPDPSP 1179
Query: 1149 VN--VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
L+S L Y F LLVEA TH S+ YQRLEFLGDA+LD ++ YL+
Sbjct: 1180 APPLFEELQSGLGYEFHRGDLLVEAATHPSFAT-SAGASYQRLEFLGDALLDVVVMRYLF 1238
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLS 1265
+KYP + G L+ RS +V A +VK LH+ +L + EL I+ V + L
Sbjct: 1239 HKYPRATSGQLSVARSRAVCGPTLASVAVKRLNLHQILLINNVELSIAISRHVPLLQNLP 1298
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNRE----VVFQSIRPLLEPMITPETM 1321
PKAL DI+ES+ GA+ VDS N E VV + + +LE +I+P
Sbjct: 1299 TQEIVLKAWKYDPPKALSDIMESVFGAVLVDSAYNYEKAAAVVEEVMSEVLE-LISPSVA 1357
Query: 1322 RFHPVREL 1329
R PV +L
Sbjct: 1358 R-DPVTDL 1364
>gi|451850832|gb|EMD64133.1| hypothetical protein COCSADRAFT_142297 [Cochliobolus sativus ND90Pr]
Length = 1435
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 195/421 (46%), Gaps = 55/421 (13%)
Query: 928 CRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT-IPTIKVLEAIT 986
C + P S + S PSI H+L++ ++A L+ +L +++ +P I L A+T
Sbjct: 904 CIVDDLPASYAVLASL--FPSITHKLETYMVANALRTTVLQSVNIDISHLPII--LLALT 959
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
+ + + LE LGD LK+ S L T+ EG+L+ KK +++SN L +
Sbjct: 960 PSAVDGEENYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYLARAALA 1019
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVT---GRKKVKSKTVADVV 1103
+ L FI + F W + + + +T +++ SK +ADV+
Sbjct: 1020 KGLDEFILYKRFTGAKW--------------KPRYVSQVLAITNPPAKQEKSSKLIADVI 1065
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA----ERLVNVRHLESLLN 1159
E+LIGA GG + + + D++ +P +A + ++ V +E+L+
Sbjct: 1066 ESLIGASYVVGGFSKAFACVKALLPLEDWMPIPQANDTLYNAAPEQDSVMGVIPVENLVG 1125
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
+ F + ++L+EALTH ++ Y+R EFLGDAVLDY+++ LY+ P L +
Sbjct: 1126 HIFNNKAMLLEALTHPTFRGLNTHCSYEREEFLGDAVLDYIVSKRLYSHRPELPHHKMHG 1185
Query: 1220 MRSASVNNDCYALS-------------------SVKHGLHKHILHASHELYKRINITVDS 1260
+R+A VN A S + + L + + SHEL N+ +
Sbjct: 1186 IRTAMVNASFLAYSMFETTVEEIFTNKETLQPETHQRALWQFLRSTSHELVMSRNLAIRR 1245
Query: 1261 F--------EKLSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRP 1310
E L + F W S+T PK L DI+ES+ GA+++DS + V + +R
Sbjct: 1246 HSEARIQITEALQHDARFPWHALSLTDPPKFLSDIVESMIGALYIDSHGSLPVCEEFVRR 1305
Query: 1311 L 1311
L
Sbjct: 1306 L 1306
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 159/320 (49%), Gaps = 29/320 (9%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSR-----------KKQNE 439
++FVE+ + + L+E+L H KT G G S+ K Q
Sbjct: 397 LVFVEQRVWV----ASLAEILASHPRTKTLLRIGTFVGTSQSSQHKSSIFNYANLKNQQT 452
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
++++F+ G++N+++ TS+LEEG+DV SC+LV+ F+ +T+ F+Q RGRAR Q S Y ++
Sbjct: 453 VLDDFKAGIINLVLTTSVLEEGIDVPSCHLVVCFEAPKTLKGFVQRRGRARQQRSRYYIL 512
Query: 500 VKS-GDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLS 558
V GD+ T + ++ A K ++ +L Y +E+TG + TL
Sbjct: 513 VPDMGDAYTSASWQSLEAQMRKAYEDDERQTALSFEKEYIEEYDSRCLRIETTGALLTLD 572
Query: 559 SSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGI-CTLYLPNNCPIQTVIAQGNIKTL 614
+++ +Y +C+RL S Y P+F ++N ++ +L + + ++T + KT
Sbjct: 573 NAMQHLYHFCARLSSGTYVDARPEFDFTNVNGQISAKASLPICVDLTVRTANSSRTWKTE 632
Query: 615 KQA---ACLEACKKLHQIGALTDNLLPDI---VVEKHDAQKRGNEP--YNAEHPIYFPPE 666
+ A A EA K L+ G + +NLLP I V Q R N+P H I P +
Sbjct: 633 RMAQKDAAFEAYKTLYIAGLVNENLLPVIEEDVEHMTKYQTRDNQPSLIPVSHTID-PWQ 691
Query: 667 LVNQSPQDTKITYHCYLIEL 686
++ Q + + +H L+E+
Sbjct: 692 VIAQYHKTALLEWHSTLLEV 711
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 11 TEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLR-KPSPF 69
T V+ D + R YQ E + ++K N IV ++TGSGKT IAI R+ A L KP
Sbjct: 13 TVAVTPDEVFHLRGYQAEMIAESMKANIIVVMDTGSGKTHIAIE--RARAELETCKPDKL 70
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM--TP 127
V FL P V L QQ E + + V+ W E+ +H V ++ T
Sbjct: 71 VW-FLAPTVALCEQQYEVFQANLPGYGHLLLCGRDVELWTTQRAWNEVFQHNVRIVMSTH 129
Query: 128 QILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
QILLD L + L + +LI DE HH KH IM++FY L LPR+ G++
Sbjct: 130 QILLDALTHGFMSLQKLALLIFDEAHHCTLKHPAHKIMSDFYMPRLSDRTFVLPRVLGLS 189
Query: 188 ASPIKSKVSSSE 199
ASP+ ++ +
Sbjct: 190 ASPVMRAAANKQ 201
>gi|156553056|ref|XP_001605287.1| PREDICTED: endoribonuclease Dcr-1 [Nasonia vitripennis]
Length = 1917
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 149/336 (44%), Gaps = 72/336 (21%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVGLIFL----------------------DRI----- 1126
+ K++AD VEALIGA+L G L+F+ DR+
Sbjct: 1552 IPDKSIADCVEALIGAYLIACGPRGALLFMSWLGIHVLPTEEVVTISDSKPTDRLPGSTP 1611
Query: 1127 -------GIKVDFVNVPYQRQFQVHAERLVNVRH--------------LESLLNYSFRDP 1165
G + + Y++ + + NV LE + Y+FR+
Sbjct: 1612 YVELGEEGGSTKWTQLRYKKLQEPPSPLFYNVPQPEIELEIMLDGYDSLERSIGYTFRNR 1671
Query: 1166 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASV 1225
S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY SPG LTD+RSA V
Sbjct: 1672 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 1731
Query: 1226 NNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTFGWE---------- 1273
NN +A +V+ G HK+ H S L N +D F ++ G + E
Sbjct: 1732 NNTIFASLAVRCGFHKYFRHLSPGL----NTVIDRFVRIQEENGHSISEEYYLIGEREFE 1787
Query: 1274 -----SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPV 1326
PKALGD+ ESLAGAI++DS + + V+ +++ I + P+
Sbjct: 1788 EAEEAEDVEVPKALGDVFESLAGAIYLDSNMSLDAVWAVYFEIMKSEIEQFSANVPKSPI 1847
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
REL E + KP + VTV+V G
Sbjct: 1848 RELLE-LEPETAKFGKPEKLADGRRVRVTVDVFGKG 1882
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 170/680 (25%), Positives = 298/680 (43%), Gaps = 124/680 (18%)
Query: 387 DIRC-IIFVERVITAIVLQSLLSELLPRHCTWKTKYIA------GNNSGIQCQ-----SR 434
D+ C +IFV+ +TA VL LL+E+ C +++ +N + C
Sbjct: 425 DLLCGVIFVDDAVTAKVLFYLLNEM--SKCEESLHFLSPLFTSEKSNDELFCGRDLELEY 482
Query: 435 KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+KQ E++++FR N++++T+ILEEG+D+ CN V+ F+ + S++Q + RAR ++
Sbjct: 483 RKQEEVLKKFRIHECNLLISTAILEEGIDIPKCNFVMRFEFPKNYQSYVQCKSRARATDA 542
Query: 495 DYLLMVKSGDSTTQ-SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV----E 549
++L+V +S RL +Y + + S + C Y E
Sbjct: 543 LHVLLVPEIESEVYIQRLAHYHYIEKILLSKCTSKEADECEETEADAYDSVLPEYKPLDE 602
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPNNCPIQ 603
TL+S++SL+ YC++LPSD + K TP++ I NK+M IC+L LP N P++
Sbjct: 603 EDAPKVTLNSAISLVNRYCAKLPSDTFTKLTPEWKINNITVENKQMYICSLRLPINSPLK 662
Query: 604 TVIAQ---GNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPYNAEHP 660
I+ N K+ A L+ C LH+ + D LLP V K + + P ++E P
Sbjct: 663 YSISSYPMPNKALAKRMAALQMCVCLHKENEIDDYLLP---VGKENFKAH---PEDSEVP 716
Query: 661 IYFPPE---LVNQSPQDTKITYHCY------LIELKQHFN-----YDISARNIVLA--MR 704
E L P TK + Y LI+ K Y I N+VL+ +
Sbjct: 717 ALPDDENMDLTEARPGTTKRRQYYYKKIADALIDCKPELEEPCYLYHI---NMVLSCPLP 773
Query: 705 TELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCR----RFQITLFR--VIMD 758
E + +K+ E + G + K + ++ P + R R + L + V++D
Sbjct: 774 EEQNTRGRKIYPPEESDIGFGILTRKKIPKVCPFP---IYTRSGEVRVDLKLSKETVVLD 830
Query: 759 HN-LDKLNEILDG-----FELRDNL--------EIDYLLLPSTGQ------LIDWKTVAT 798
+ +DK+ L+ L+ L E Y+++P Q +DW V
Sbjct: 831 ESKIDKVVSFLNYTFTNVLRLQKYLMLFDPNVSENSYIIVPVKKQPNASDICVDWDFVEC 890
Query: 799 VLFPRD---NGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQ----IYCIT 851
+ RD N + +F A K H++++ + Q + +
Sbjct: 891 IYANRDSMPNRISEENRQNFVFEA------------SKYHDAVIMPWYRNQDQPQYFYVA 938
Query: 852 GVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYLS 906
+ HLN S F +T++++Y ++YGIQ+ +PLL+ R F Y++
Sbjct: 939 EICNHLNPKSSFP--GADYSTFEEYYSKKYGIQIQNLEQPLLDVDHTSARLNFLTPRYVN 996
Query: 907 K------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
+ ++ K + + E L ELC I P SL + +P I++R+ +L
Sbjct: 997 RKGVALPTSSEETKRAKRENLEQKQILIAELCAIHPFPASL--WRQAVCLPCILYRINAL 1054
Query: 957 LLAVNLKNMLLDHCMQNVTI 976
LLA ++ H Q++++
Sbjct: 1055 LLADQIRR----HVAQSISL 1070
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + LF TY N HEG LS + + +SN L
Sbjct: 1379 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQVSNLNL 1438
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1439 YRLGRQKMLGESMIASKFEPHDNWLPP 1465
Score = 40.4 bits (93), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGY 1216
L +S PSL+++ALT + +RLE +GD+ L Y IT YL+ Y + G
Sbjct: 1368 LDGHSGPSPSLILQALTMSN---ANDGINLERLETIGDSFLKYAITTYLFCTYNNIHEGK 1424
Query: 1217 LTDMRSASVNN 1227
L+ +RS V+N
Sbjct: 1425 LSHLRSKQVSN 1435
>gi|259485853|tpe|CBF83228.1| TPA: Dicer-like protein 2 [Includes Endoribonuclease dcl2(EC
3.1.26.-);ATP-dependent helicase dcl2(EC 3.6.1.-)]
[Source:UniProtKB/Swiss-Prot;Acc:P0C5H7] [Aspergillus
nidulans FGSC A4]
Length = 1269
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 201/490 (41%), Gaps = 89/490 (18%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQ--QKQ----KEPSKISFELPPELCRIIMA 933
RYG L F R +G Y SK R Q+Q K P++ P RI+ A
Sbjct: 623 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRILSA 682
Query: 934 --------PISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVLEA 984
P S + F F +P I+ RL++ L+A L + +L D Q++ V+ A
Sbjct: 683 SHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDLR----HVITA 736
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
IT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 737 ITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAA 796
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR-KKVKSKTVADVV 1103
+Q L +I + F P+ W P K+Y + + + +K +ADVV
Sbjct: 797 LDQGLDAYIISNRFTPRKWSAP--------------LISEKLYASASTRSMSAKVLADVV 842
Query: 1104 EALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER--LVNVRHLESL 1157
EALIGA GG ++ + FL I + + P ++ L+ +LE+
Sbjct: 843 EALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENH 902
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+ Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G +
Sbjct: 903 IGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEM 962
Query: 1218 TDMRSASVNNDCYAL--------------SSVKHG------------------------- 1238
T ++ A VN A S+ G
Sbjct: 963 TKIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSP 1022
Query: 1239 -----LHKHILHASHELYKRINITVDS-FEKLSLGSTFGWE--SVTSFPKALGDIIESLA 1290
LH S R N+ S L+ + + W S K D++ES+
Sbjct: 1023 SRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESII 1082
Query: 1291 GAIFVDSGCN 1300
GAIFVDSG +
Sbjct: 1083 GAIFVDSGGD 1092
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 141/303 (46%), Gaps = 49/303 (16%)
Query: 368 LTEKIVCLIESLLEYRGVEDIR--CIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
++ K LI L+ EDI +IFVE+ V+ LLS H + + ++ G+
Sbjct: 169 VSPKFEALISFLM---STEDINFSGLIFVEQRAAVTVMSYLLST----HPSTRDRFRTGS 221
Query: 426 NSGIQCQSRKK-----------QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
G+ + +K Q + +++FR G N+IVAT +L+EG+DV +C++VI ++
Sbjct: 222 FIGMSNSTNRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYN 281
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT--------QSRLENYLASGNKMRKEVL 526
+ SFIQ RGRAR QNS Y +M+ + D + + +E + +E+
Sbjct: 282 IPKGFESFIQRRGRARRQNSTYSMMLSTEDDGSTLDKWQKFEKIMEEACLEDRRRTEELR 341
Query: 527 SHASLPCSPLNNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF 583
+ SL ED + V STG I T ++ + +C LP Y + P+F
Sbjct: 342 ALGSL----------DEDVCTRFCVRSTGAILTAEYAMQHLVHFCDTLPRQNYVEDKPEF 391
Query: 584 HINKEMG---ICTLYLPNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDN 635
+ G + LP++ + A+G + K+ A A K L++ G + DN
Sbjct: 392 SFERNDGGLLRAKVILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDN 451
Query: 636 LLP 638
LLP
Sbjct: 452 LLP 454
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 1148 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 712 LVATRLCETVLRDIQFQDLRHVITAIT---MPLAQAPTDYQRYEFFGDSVLKFTVAASLF 768
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
P GYLT+ A V N +++ GL +I+ S+ R EKL
Sbjct: 769 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYII--SNRFTPRKWSAPLISEKLYA 826
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
++ + + K L D++E+L GA ++D G ++
Sbjct: 827 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 857
>gi|67525463|ref|XP_660793.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
gi|40743766|gb|EAA62953.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
Length = 1726
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 201/490 (41%), Gaps = 89/490 (18%)
Query: 880 RYGIQLCFDREPLLNGRRIFHVQNYLSKCRQ--QKQ----KEPSKISFELPPELCRIIMA 933
RYG L F R +G Y SK R Q+Q K P++ P RI+ A
Sbjct: 1080 RYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQRQTLAKKRPAEDEILGSPTKKRILSA 1139
Query: 934 --------PISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVLEA 984
P S + F F +P I+ RL++ L+A L + +L D Q++ V+ A
Sbjct: 1140 SHCTIDRLPASETVFGRF--IPVILDRLEAALVATRLCETVLRDIQFQDLR----HVITA 1193
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
IT Q + E GDS LK+ + LF N HEG L+ ++ NA L +
Sbjct: 1194 ITMPLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAA 1253
Query: 1045 CEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR-KKVKSKTVADVV 1103
+Q L +I + F P+ W P K+Y + + + +K +ADVV
Sbjct: 1254 LDQGLDAYIISNRFTPRKWSAP--------------LISEKLYASASTRSMSAKVLADVV 1299
Query: 1104 EALIGAFLSTGG----ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAER--LVNVRHLESL 1157
EALIGA GG ++ + FL I + + P ++ L+ +LE+
Sbjct: 1300 EALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPMSKDHKKPHLIQQENLENH 1359
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYL 1217
+ Y+F+D +LL+EALTH S + YQRLEFLGDAVLD LI + + G +
Sbjct: 1360 IGYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEM 1419
Query: 1218 TDMRSASVNNDCYAL--------------SSVKHG------------------------- 1238
T ++ A VN A S+ G
Sbjct: 1420 TKIKHAIVNGHLLAFLCMQFKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRYSP 1479
Query: 1239 -----LHKHILHASHELYKRINITVDS-FEKLSLGSTFGWE--SVTSFPKALGDIIESLA 1290
LH S R N+ S L+ + + W S K D++ES+
Sbjct: 1480 SRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVESII 1539
Query: 1291 GAIFVDSGCN 1300
GAIFVDSG +
Sbjct: 1540 GAIFVDSGGD 1549
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 159/653 (24%), Positives = 263/653 (40%), Gaps = 143/653 (21%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR+YQLE E +LK N IV + TGSGKT + + A + + V
Sbjct: 366 ARSYQLEMFEASLKGNIIVVMGTGSGKTQM-----------------YAACPGLRSLTDV 408
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
Q++ A HT + G+ + V+ W + A W + +V+V TP +L D + +
Sbjct: 409 SQRSPA--YHT--RAGELGWEDKVELWTEQAVWDAVLEGLQVIVSTPAVLHDAMTHGF-- 462
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
E G +PRI G+TAS S+
Sbjct: 463 ---------------------------------EYGPGAVPRILGLTASAGSSR------ 483
Query: 201 DYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMI 260
+ + +E +NS C + + ++ E+ LYT L E A
Sbjct: 484 ---EGLQTIEMNLNS---VCTTPQAHRQEL------LEYTHMPELRRVLYTPLMKENA-- 529
Query: 261 ELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLA---LKAAETISCYESD 317
L +L+ L E ++ ++ ELG+W A ++A ++ S
Sbjct: 530 SLWEGSTLQKL--LERDNTYCSGQMKTFVCKAVHIFQELGIWAAEYFIRA--SVEELLSH 585
Query: 318 FFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIE 377
+ ++D D + LV + I S D + + K LI
Sbjct: 586 AYVHSKID---------LDYDEREYLVNILSKSPVPDIDVHSTDPKDFPV-SPKFEALIS 635
Query: 378 SLLEYRGVEDIR--CIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK 435
L+ EDI +IFVE+ V+ LLS H + + ++ G+ G+ + +
Sbjct: 636 FLM---STEDINFSGLIFVEQRAAVTVMSYLLST----HPSTRDRFRTGSFIGMSNSTNR 688
Query: 436 K-----------QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
K Q + +++FR G N+IVAT +L+EG+DV +C++VI ++ + SFIQ
Sbjct: 689 KTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQ 748
Query: 485 SRGRARMQNSDYLLMVKSGDSTT--------QSRLENYLASGNKMRKEVLSHASLPCSPL 536
RGRAR QNS Y +M+ + D + + +E + +E+ + SL
Sbjct: 749 RRGRARRQNSTYSMMLSTEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGSL----- 803
Query: 537 NNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--- 590
ED + V STG I T ++ + +C LP Y + P+F + G
Sbjct: 804 -----DEDVCTRFCVRSTGAILTAEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGGLL 858
Query: 591 ICTLYLPNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
+ LP++ + A+G + K+ A A K L++ G + DNLLP
Sbjct: 859 RAKVILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLP 911
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 1148 LVNVRHLESLL-NYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
LV R E++L + F+D ++ A+T L + P YQR EF GD+VL + + L+
Sbjct: 1169 LVATRLCETVLRDIQFQDLRHVITAIT---MPLAQAPTDYQRYEFFGDSVLKFTVAASLF 1225
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
P GYLT+ A V N +++ GL +I+ S+ R EKL
Sbjct: 1226 YNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYII--SNRFTPRKWSAPLISEKLYA 1283
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
++ + + K L D++E+L GA ++D G ++
Sbjct: 1284 SAS----TRSMSAKVLADVVEALIGAAYIDGGLHK 1314
>gi|111226989|ref|XP_001134628.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
gi|90971302|gb|EAS66962.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
Length = 837
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 172/619 (27%), Positives = 276/619 (44%), Gaps = 100/619 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ E +++++ I L TG GKTLI+ ++++ L PS + VF+V ++ LV
Sbjct: 233 RDYQCELYRKSMEKDIICCLPTGLGKTLISCLVIKKMKQL--NPSKQI-VFIVDRIPLVI 289
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWK--EEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ++ I+ T LKV G+ T+K + + +VLV+ L + L LS
Sbjct: 290 QQSDVIETETGLKVLSAHGE---------TFKPVQLKQRFDVLVVIGD-LFNKL-LSNGD 338
Query: 141 LNMIK--VLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
LN++ ++++DE HH +H +A ++ + + + E P+I G+TASP +
Sbjct: 339 LNILSFCLIVIDEAHHIVKEHSFAKLLRDKLNTIPEICH---PKILGLTASP------AG 389
Query: 199 EQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFIPFSTAKFKFYKYDEIP-HALYTHLADE 256
++D++ + L+ + SKV C + + IP+ K K IP + L H
Sbjct: 390 KKDFFNTLLSLKLI--SKVSRCEIIKPTNQSIIPYINQKN--IKIIPIPTNNLERHSIQI 445
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAA---ETISC 313
L + K+ +L N EL S I+S L L G ++ ++
Sbjct: 446 LKDLISKYKPNLSN------NQELFDSVTSVIDSNTLKGLGVGGGGGGSNSSTQNHNLNK 499
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW-SIGDDSKFNLDSGLLTEKI 372
+ S FF E+++ F K FGS +P G S + N+D L +I
Sbjct: 500 FLSSFF--EKINDFIN--FKMFGS--------AIPVGLNLKSFLIEEISNIDDVELQSEI 547
Query: 373 VCLIESL-------------------LEYRGVEDIRCIIFVERVITAIVLQSLLSELL-- 411
+ ++ SL L+ + +D++ IIFV+ A + SLL +L
Sbjct: 548 LAMVHSLPCDEEIADSISKLEIALQILDEKKSDDLKAIIFVKTRDVAKKVYSLLDQLRMG 607
Query: 412 PRHCTWKTKYIAGNNS--GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
R K + G+ S G+ S+KK +EEFR NVIVATS++EEG DV CN+
Sbjct: 608 DRFSFIKPNLVVGHGSIGGMSISSQKKA---IEEFRSDQCNVIVATSVVEEGFDVPECNI 664
Query: 470 VIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV--LS 527
VI DP TV + IQSRGR R ++S + +VK D + E + + + + L
Sbjct: 665 VIRLDPPTTVTANIQSRGRLRNRDSYFYGIVKVDDPREDNIYEFFKNQERYLEEAINFLK 724
Query: 528 HASLPCSPLNNHMYGEDFYHV----ESTGTIATLSSSVSLIYFYCSRLPSD--------- 574
LP S L Y V ++ A+ S+ V + R D
Sbjct: 725 TGELPIS-LKQQNYTTQVNQVDEEMDTNSYFASASALVQEMVIQVKRHTFDFGIAWEHTP 783
Query: 575 ---GYFKPTPKFHINKEMG 590
G+F F+INKE
Sbjct: 784 DGSGFFNAIATFYINKEAA 802
>gi|281207108|gb|EFA81291.1| RNA-directed RNA polymerase [Polysphondylium pallidum PN500]
Length = 2852
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 235/521 (45%), Gaps = 74/521 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSP--------FVAVFL 74
R YQ+E+L A+K+NT++ + TG GKTL+AIML++ + + +P + +F
Sbjct: 415 REYQIESLARAIKKNTLLVIPTGLGKTLVAIMLIQQMV-AVNQWTPEQQAGNHKRMVLFT 473
Query: 75 VPKVVLVPQQAEAIKMH----TDLKVG--KYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
V LV QQ +AIK H T LK+ D ++F K + + +++V T
Sbjct: 474 VNTNPLVEQQEKAIKKHNSTLTVLKLNSENRLSDRKINF------KVQSKRPDIIVATCD 527
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+++ ++ +I DE HHA G H Y +MT + E PRI G++A
Sbjct: 528 SIINLFNTRKLCISDFHTIIFDEVHHATGDHSYTKVMTHYK----EMEAKLYPRILGLSA 583
Query: 189 SPIKSKVSSSEQDYWQ---KIHDLETLMNSKVYT---CASESVLSNFIPFSTAK-----F 237
SP SS +D + I +E ++ S V+ + ++ SN + F+ + F
Sbjct: 584 SP------SSGEDRIKITGNIMKMEKVLASSVFRPNLPPTINLESNQLVFTLTQEEKDCF 637
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY--- 294
K K + + L I ++ L+ ++L++ R + + + ++
Sbjct: 638 KVVK---------EKINERLKTIMMESNYFLKGMELSDNNHPSFRSNLKQFYTWTVHNDL 688
Query: 295 -CLSELG------VWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYV 347
+ELG WL + E + F + + D I + D + L V
Sbjct: 689 KVSNELGDILRIFEWLMVTGVEGF----NQFLNYLENDLASTAIQEGRSRDFIEELHNLV 744
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
+ + S++ LTEK+ E ++ +RG IIFV++ T+ L +L
Sbjct: 745 VEKGGKRVVNSSRYQRVVEKLTEKLDSE-EKVINFRG------IIFVKKRSTSRSLVHML 797
Query: 408 SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
+ P + K I G+N G +KQ I+ +FR G ++VATS+LEEG+DV +C
Sbjct: 798 KK-EPINSKVNAKIIVGHN-GEDGMDSEKQERIMVKFREGQSKLLVATSVLEEGIDVNTC 855
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ 508
N V+ FD + S IQ RGRAR + VKS + +
Sbjct: 856 NFVLCFDDDLDMRSMIQRRGRARNKEEGEFWYVKSHEEVNK 896
>gi|156368540|ref|XP_001627751.1| predicted protein [Nematostella vectensis]
gi|156214670|gb|EDO35651.1| predicted protein [Nematostella vectensis]
Length = 199
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 18/195 (9%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
++ E + Y F + L++ALTH SY + CYQRLEFLGDA+LD+L+T +Y++
Sbjct: 1 LQGFEKRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNT 60
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITV------------ 1258
L PG LTD+R A VNN+ +A +VKHG +K + S E + +I + V
Sbjct: 61 NLDPGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQ 120
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
D F LS G E+ PK LGDI ES+AGAIF+DSG + + ++ +L+P I
Sbjct: 121 DPFLTLSNDDEEGIEA----PKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRMLKPYIDA 176
Query: 1319 ETMRF--HPVRELTE 1331
+ +PVR + E
Sbjct: 177 YSADVPKNPVRLIHE 191
>gi|154282055|ref|XP_001541840.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412019|gb|EDN07407.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1437
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 198/463 (42%), Gaps = 76/463 (16%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F PSI+H ++ L+A L K +L ++++ V+
Sbjct: 878 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLIAEELNKTILRPIAFTDLSL----VI 931
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL T HEGLLS K+ ++SN L
Sbjct: 932 TAISASVAREATNYQRIEFLGDSILKFQTTLQLTATNLIWHEGLLSRAKDTVVSNKRLSY 991
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N D L + + ++++ +KT+ADV
Sbjct: 992 AAIEAGLDKFILLDVFTGAKWRPP--------YNKDHLESEEQ--GVAQREMSTKTLADV 1041
Query: 1103 VEALIGAFLSTGG----ENVGLIFLDRIGIKV--DFVNVPYQRQFQVHAERLVN-VRHLE 1155
VEAL+ A GG E IFL I D VN Y + + L + + +E
Sbjct: 1042 VEALLAAATLDGGQRKAEKCLEIFLPEIQWMPLEDRVNALYSSVPEAYENTLTSWFQEVE 1101
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
SL+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N
Sbjct: 1102 SLVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVHHLFNAPRA 1156
Query: 1212 LSPGYLTDMRSASVNND-----CYALSS-----------------------------VKH 1237
L + MR+A N D C +S+ ++H
Sbjct: 1157 LPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTKLTTRKVSLWQYMRH 1216
Query: 1238 GLHKHILHASHELYKRIN-ITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIF 1294
G + A + + + D E L T+ W ++ F K D+IES+ GAIF
Sbjct: 1217 GTSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSRFHPQKFFSDLIESVLGAIF 1276
Query: 1295 VDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTE 1331
+DS C + + L M+ E M HP + L +
Sbjct: 1277 IDSHGSLDACTAFLERIGLMKFLRRMLVDEDMDLMHPKQRLGQ 1319
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 375 LIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSG--- 428
L+ LLE D I+F ++ T ++L+ L+ RH K K+++G +SG
Sbjct: 370 LLIDLLEREYTSDFTGIVFAQQRSTV----TMLAHLISRHPRLKHKFVSGAFLGDSGYAG 425
Query: 429 -----IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
I+ K Q +++ R G N+++ATS+LEEG+DV +C+LV+ FD + SFI
Sbjct: 426 RTSTIIELHDLKTQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVVCFDTISNLRSFI 485
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQ----SRLENYLASGNKMRKEVLSHASLPCSPLNNH 539
Q RGRAR + S +++ + +GD +Q +++E+ + S M +E + + N
Sbjct: 486 QRRGRARKERSKFVMFL-NGDDNSQGKKWTKMEDVMKS---MYEEDMRRLEDVWAKENVE 541
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD-GYFKPTPKFHINKEMGICT--LYL 596
++ +ESTG + T ++ + +C+ L + +P F N+ G+ T + L
Sbjct: 542 EESDEDRRIESTGALLTFENARPHLEHFCATLQCEFTDTRPVFMFRENELGGMVTAKVLL 601
Query: 597 PNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
PN + + +G+ K ++ A +A KL+Q G + D+LLP
Sbjct: 602 PNVLDPKFRVIKGSKWWRTEKLAQRDAAFQAYLKLYQEGLVNDHLLP 648
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +L++N I+ ++TGSGKT +AI+ +R + FV FL P V L
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIR-HELETCAAHKFVW-FLTPTVALAE 105
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWD-GATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ + I + + G V++W W + + ++V TPQ+LLD + +
Sbjct: 106 QQHKNISQQLSAYETRLLLGSDNVNYWSTKKIWDDILLNIRIVVSTPQVLLDAMTHGFVT 165
Query: 141 LNMIKVLILDE 151
+ I +L+ DE
Sbjct: 166 MPQIALLVFDE 176
>gi|240255863|ref|NP_680697.4| protein RNAse II-like 1 [Arabidopsis thaliana]
gi|332658200|gb|AEE83600.1| protein RNAse II-like 1 [Arabidopsis thaliana]
Length = 264
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
++L+ + LE +LNY F+D SLL++A T SY + + Y+ LE LGD++L+ I
Sbjct: 24 DQLMEIESLEKILNYKFKDKSLLLKAFTDASY-VDDKSESYELLELLGDSILNMGIIYDF 82
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
YP +PG LT +R+ +V+ + A +V H L+ ++ H L ++I V++ EK
Sbjct: 83 IKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYP 142
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR-EVVFQSIRPLLEPMITPETMRFH 1324
L S + PK L DI+ES GAIF+D CN E V++ I+PLLEP+I + M+ H
Sbjct: 143 LHSN----GLLKVPKVLADIVESTIGAIFMD--CNSTETVWKVIKPLLEPIIHLDKMKSH 196
Query: 1325 PVRELTEYCQKNHFSM 1340
P+ EL E CQK + +
Sbjct: 197 PMTELNEMCQKRNLKL 212
>gi|449682783|ref|XP_002165718.2| PREDICTED: endoribonuclease Dicer-like [Hydra magnipapillata]
Length = 1001
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 148/292 (50%), Gaps = 36/292 (12%)
Query: 1061 KMWIIPGDNSGSYELNDDSLFN--GRKIYVTGRKKVKSKTVADVVEALIG-----AFLST 1113
K+ I +N G Y+ + L N K YVT + VKS +V + EAL F
Sbjct: 675 KIKINKSENQGRYQSSVLDLENLLQLKNYVT--ENVKSPSVLKIFEALTTRQASMPFDLE 732
Query: 1114 GGENVGLIFLDR-IGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEAL 1172
E +G FL + + I V F N + H +L R F + S L++A
Sbjct: 733 RLEVLGDSFLKQAVSIFVFFQNPSF------HEGKLTIRRK-------KFLNKSHLIQAF 779
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
TH SY+ + CYQ+ EFLGDA+LD+LIT+++ + LSPG LT RSA VNN+ + L
Sbjct: 780 THLSYLSNSVTGCYQQYEFLGDAILDFLITLHIQSNTQNLSPGQLTYFRSAVVNNNTFGL 839
Query: 1233 SSVKHGLHKHILHASHELYKRINITV-----------DSFEKLSLGSTFGWESVTSFPKA 1281
++KH +K+I +S+EL+ N + + FE + G E PK
Sbjct: 840 LAIKHSFYKYIYSSSNELFSSYNSFIEIVKDDHGLKDEYFESPFVICPTGSEEGYQAPKV 899
Query: 1282 LGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTE 1331
LGD+ ES+AGAIF+DSG + V++ PLL+P+I ++ HP + E
Sbjct: 900 LGDLFESVAGAIFLDSGLDLVTVWKIYYPLLKPVIDKYMIKLPRHPAVDFFE 951
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 19/235 (8%)
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWK---TKYIAGN--NSGI----QCQSRKKQ 437
++ I+F +R TA+VL L++ + + T+K + ++ G+ +S I +KQ
Sbjct: 190 ELHAIVFTQRRCTAVVLSKLINYQVEKDETYKGLNSDFVLGHAFDSNICLVDGSMRSEKQ 249
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
N I+ F++ NV+V+TS++EEGLDV+ CNLV+ FD + QS+GRAR S ++
Sbjct: 250 NLILSNFKQDKFNVLVSTSVVEEGLDVRKCNLVVRFDGINNYREYAQSKGRARASGSKFI 309
Query: 498 LMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGED--------FYHVE 549
+M + G + + ++ E + LP ++ F H
Sbjct: 310 IMTEEGQEFDTKKQHIVMQQIEEILFEQCQNRVLPTDEEIEIEMMDEEDEDLPVYFSHNG 369
Query: 550 STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF--HINKEMGICTLYLPNNCPI 602
T ++VSL+Y YCSRLPSD + K PKF H+ K LP NC +
Sbjct: 370 YDAPRITKDNAVSLLYRYCSRLPSDQFCKTNPKFLYHVLKNQFCAECMLPLNCSL 424
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 40/227 (17%)
Query: 845 GQIYCITGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNY 904
++Y +T + LN +S T+ ++Y E+Y I++ ++ PL++ Q
Sbjct: 558 NRMYYVTAI-SKLNTSSFIEGKK----TFVQYYLEKYNIEISPNK-PLIDVISCSQ-QIS 610
Query: 905 LSKCRQQKQKEPSKISFE-LPPELCR-IIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL 962
+ C + ++ E L PELC+ + + P L + +P I++ + LA+ L
Sbjct: 611 FTNCESNTNTKKKNVNMEKLVPELCKKVSLFPADLH--FQLPCLPRIIYFYEYYFLALEL 668
Query: 963 KNM----------------------------LLDHCMQNVTIPTI-KVLEAITTKKCQED 993
K+M L ++ +NV P++ K+ EA+TT++
Sbjct: 669 KDMIAEKIKINKSENQGRYQSSVLDLENLLQLKNYVTENVKSPSVLKIFEALTTRQASMP 728
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
F LE LE LGDSFLK A S +F + HEG L++++++ ++ + L
Sbjct: 729 FDLERLEVLGDSFLKQAVSIFVFFQNPSFHEGKLTIRRKKFLNKSHL 775
Score = 41.2 bits (95), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 149 LDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYW----- 203
+DECH+A KH Y +M F + S P I G+TAS I K + D
Sbjct: 1 MDECHNATKKHSYVKLMEIFGN----YPKSEHPHILGLTASIINEKYTGVFNDQAIKSFL 56
Query: 204 -QKIHDLETLMNSKVYTCASESVLSNF 229
+I LE M SK TC+ + F
Sbjct: 57 KNRILGLERRMRSKCITCSDPQATTKF 83
>gi|225563402|gb|EEH11681.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1436
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 201/464 (43%), Gaps = 78/464 (16%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F PSI+H ++ LLA L K +L ++++ V+
Sbjct: 878 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLLAEELNKTILRPVAFTDLSL----VI 931
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL HEGLLS K+ ++SN L
Sbjct: 932 TAISASVAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSY 991
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N D L + + ++++ +KT+ADV
Sbjct: 992 AAIETGLDKFILLDVFTGAKWRPP--------CNKDHLESEEQD--VPQREMSTKTLADV 1041
Query: 1103 VEALIGAFLSTGG----ENVGLIFLDRIGIKV--DFVNVPYQRQFQVHAERLVN-VRHLE 1155
VEAL+ A GG E IFL + D VN Y + + L + + +E
Sbjct: 1042 VEALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDRVNALYSSVPEAYENTLTSWFQEVE 1101
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
SL+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N P
Sbjct: 1102 SLVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVYHLFNA-PR 1155
Query: 1212 LSPGY-LTDMRSASVNNDCYA--------------------------LSSVKHGLHKHIL 1244
P + + MR+A N D A L++ K L +++
Sbjct: 1156 TFPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTTLTTHKVSLWQYMR 1215
Query: 1245 HA-SHELYKRINITVDSFEKLSLGSTFGWESVTSFP----------KALGDIIESLAGAI 1293
H S EL T + +E L + E ++P K D+IES+ GAI
Sbjct: 1216 HGTSWELTAAQQQTANQYETLQADISEALEGSHTYPWTLLSRLHAQKFFSDLIESVLGAI 1275
Query: 1294 FVDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTE 1331
F+DS C + + L M+ E M F HP + L E
Sbjct: 1276 FIDSHGSLDACTAFLERIGLMKFLRRMLVDEDMDFMHPKQRLGE 1319
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 375 LIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSG--- 428
L+ LLE D IIF ++ T ++L+ L+ RH K +++G +SG
Sbjct: 353 LLIDLLEKEYTSDFTGIIFAQQRSTV----TMLAHLISRHPRLKHMFVSGAFLGDSGYAG 408
Query: 429 -----IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
I+ K Q +++ R G N+++ATS+LEEG+DV +C+LVI FD + SFI
Sbjct: 409 RTSTIIELHDLKTQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVICFDTINNLRSFI 468
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQ----SRLENYLASGNKMRKEVLSHASLPCSPLNNH 539
Q RGRAR + S +++ + +GD +Q +++E+ + S M +E + + N
Sbjct: 469 QRRGRARKERSKFVMFL-NGDDNSQGNKWTKMEDVMKS---MYEEDMRRLEDVWAKENVE 524
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD-GYFKPTPKFHINKEMGICT--LYL 596
++ + +ESTG + T ++ + +C+ L + +P F N+ G+ T + L
Sbjct: 525 EESDEDHRIESTGALLTFENARPHLEHFCATLQCEFTDTRPVFMFRENELDGMVTAKVLL 584
Query: 597 PNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
PN + + +G+ + ++ A +A KL+Q G + D+LLP
Sbjct: 585 PNVLDPKFRVIKGSKWWRTDQLAQRDAAFQAYLKLYQEGLVNDHLLP 631
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +L++N I+ ++TGSGKT +AI+ +R + FV FL P V L
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIR-HELETCAAHKFVW-FLTPTVALAE 105
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWD-GATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ ++I + + G V++W W + + ++V TPQ+LLD + +
Sbjct: 106 QQHKSISEQLSAYETRLLLGSDNVNYWSTKKIWDDILLNIRIVVSTPQVLLDAMTHGFVT 165
Query: 141 LNMIKVLILDE 151
+ I +L+ DE
Sbjct: 166 MPQIALLVFDE 176
>gi|320035561|gb|EFW17502.1| RNA helicase/RNAse III [Coccidioides posadasii str. Silveira]
Length = 1448
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 203/468 (43%), Gaps = 80/468 (17%)
Query: 884 QLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE-------LPPELCRIIMAPI 935
Q+ +DRE P + G ++L + EPS S P C + P+
Sbjct: 881 QVTYDREVPHIEGTVWPKRTDFLHRL------EPSNTSKAHHTAKCFYPANNCSVDRLPV 934
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDF 994
S F F+P ++H +++ +A L +L N+++ VL AI++ +E
Sbjct: 935 EYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VLTAISSSAAREAS 988
Query: 995 HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
+ + LE LGDS LK S QL + EG L+++K ++SN L + L FI
Sbjct: 989 NYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLANAALQTGLDKFIL 1048
Query: 1055 TESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTG 1114
T+ F W SY N D + G T +++ +K +ADVVEALIGA G
Sbjct: 1049 TKPFTGAKW------RPSY--NTDHINTGNMTEPT--REMSTKVLADVVEALIGAANIDG 1098
Query: 1115 GENVGL----IFLDRIGIKV--DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLL 1168
GEN L IF+ I + VN+ + +Q E + +E L+ Y+F+ LL
Sbjct: 1099 GENKILNCLKIFIPDIKWSPLNECVNILHHQQDSFSDENNNMLSEIEGLVGYTFKKKPLL 1158
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
+ A+TH S YQRLEF+GD++LD ++ L+ G + MR+A VN D
Sbjct: 1159 LAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRGFHHFDMHLMRTALVNAD 1216
Query: 1229 ----------------------------------CYALSSVKHGLHKHILHASHEL---Y 1251
Y +KH I++A Y
Sbjct: 1217 FLAFLCMNAYREEDRGEAVENSKTRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQY 1276
Query: 1252 KRINITVDSFEKLSLGSTFGWESVTSFPKA--LGDIIESLAGAIFVDS 1297
++++ +D EKL T+ W + A DI+ES+ GAIF+DS
Sbjct: 1277 EKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 5 SMESDTTEEVSADTLP--FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
S+ D T + LP AR YQLE L +L+QN IV ++TGSGKT IAI LR L
Sbjct: 28 SILEDGTSKSQEAPLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAI--LRIQREL 85
Query: 63 LRKPSPFVAVFLVPKVVLVPQQAEAI-KMHTDLKVGKYWGDMGVDFWD-GATWKEEMSKH 120
R P+ F+ P V LV QQ AI K + G V+ W W + +
Sbjct: 86 ERCPAHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVNHWSTKKIWDDILLNI 145
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSN 179
+++ TPQ+LLD L + L+ I +L+ DE HH IM +FYH E G
Sbjct: 146 RIVISTPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDG 205
Query: 180 LPRIFGMTASP 190
LP I G+TASP
Sbjct: 206 LPHILGLTASP 216
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 31/270 (11%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK----------QNEI 440
I+F E I+L LLS L PR KT G+++ + SRK Q+
Sbjct: 416 IVFAEERTIVIMLAQLLS-LHPRTKHIKTTAFLGSSASV---SRKSDITELHNPIDQSTA 471
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++ R G ++I+AT++LEEG+DV C+LVI FD + + SFIQ RGRAR + S + L +
Sbjct: 472 IDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRGRARKKGSKFALFL 531
Query: 501 KSGDSTTQSRL---ENYLASGNKMRKEVLSHASLPCSPLNN-HMYGEDFYHVESTGTIAT 556
S D T S L E + K L H L N G D + V STG T
Sbjct: 532 HSEDRATSSELHLMEKTMKQLYLENKRTLEHIQY----LENVEEEGYDGFRVASTGAFLT 587
Query: 557 LSSSVSLIYFYCSRLPSDGYFKPTPKFHI--------NKEMGICTLYLPNNCPIQTVIAQ 608
LS++ + + +C L ++ + P+F + + ++ + + P + ++
Sbjct: 588 LSNARNHLSHFCGTLSAE-FIATDPEFVLEGDDTTGFSAKVILPSFLDPKLREFRGILLW 646
Query: 609 GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
K K+ A +A L++ G + D L+P
Sbjct: 647 KTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLANAALQTGLDKFILT 1049
Query: 1246 ASHELYK-RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
K R + D ++ S K L D++E+L GA +D G N+
Sbjct: 1050 KPFTGAKWRPSYNTDHINTGNMTEPTREMST----KVLADVVEALIGAANIDGGENK 1102
>gi|303315249|ref|XP_003067632.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107302|gb|EER25487.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1448
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 203/468 (43%), Gaps = 80/468 (17%)
Query: 884 QLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE-------LPPELCRIIMAPI 935
Q+ +DRE P + G ++L + EPS S P C + P+
Sbjct: 881 QVTYDREVPHIEGTVWPKRTDFLHRL------EPSNTSKAHHTAKCFYPANNCSVDRLPV 934
Query: 936 SLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDF 994
S F F+P ++H +++ +A L +L N+++ VL AI++ +E
Sbjct: 935 EYSQFA--LFIPCLIHSIENYFIANELAQTILHPVGFSNLSL----VLTAISSSAAREAS 988
Query: 995 HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIR 1054
+ + LE LGDS LK S QL + EG L+++K ++SN L + L FI
Sbjct: 989 NYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLANAALQTGLDKFIL 1048
Query: 1055 TESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTG 1114
T+ F W SY N D + G T +++ +K +ADVVEALIGA G
Sbjct: 1049 TKPFTGAKW------RPSY--NTDHINTGDMTEPT--REMSTKVLADVVEALIGAANIDG 1098
Query: 1115 GENVGL----IFLDRIGIKV--DFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLL 1168
GEN L IF+ I + VN+ + +Q E + +E L+ Y+F+ LL
Sbjct: 1099 GENKILNCLKIFIPDIKWSPLNECVNILHHQQDSFSDENNNMLSEIEGLVGYTFKKKPLL 1158
Query: 1169 VEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
+ A+TH S YQRLEF+GD++LD ++ L+ G + MR+A VN D
Sbjct: 1159 LAAVTHPSS--KGSGHSYQRLEFVGDSILDIIVVQELFESPRGFHHFDMHLMRTALVNAD 1216
Query: 1229 ----------------------------------CYALSSVKHGLHKHILHASHEL---Y 1251
Y +KH I++A Y
Sbjct: 1217 FLAFLCMNAYREEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQY 1276
Query: 1252 KRINITVDSFEKLSLGSTFGWESVTSFPKA--LGDIIESLAGAIFVDS 1297
++++ +D EKL T+ W + A DI+ES+ GAIF+DS
Sbjct: 1277 EKLHEEID--EKLRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 95/191 (49%), Gaps = 7/191 (3%)
Query: 5 SMESDTTEEVSADTLP--FARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
S+ D T + LP AR YQLE L +L+QN IV ++TGSGKT IAI LR L
Sbjct: 28 SILEDGTSKSQEAPLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAI--LRIQREL 85
Query: 63 LRKPSPFVAVFLVPKVVLVPQQAEAI-KMHTDLKVGKYWGDMGVDFWD-GATWKEEMSKH 120
R P+ F+ P V LV QQ AI K + G V W W + +
Sbjct: 86 ERCPAHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVSHWSTKKIWDDILLNI 145
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH-RLLETGDSN 179
+++ TPQ+LLD L + L+ I +L+ DE HH IM +FYH E G
Sbjct: 146 RIVISTPQVLLDALSNGFVNLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDG 205
Query: 180 LPRIFGMTASP 190
LP I G+TASP
Sbjct: 206 LPHILGLTASP 216
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 31/270 (11%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK----------QNEI 440
I+F E I+L LLS L PR KT G+++ + SRK Q+
Sbjct: 416 IVFAEERTIVIMLAQLLS-LHPRTKHIKTTAFLGSSASV---SRKSDITELHNPIDQSTA 471
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++ R G ++I+AT++LEEG+DV C+LVI FD + + SFIQ RGRAR + S + L +
Sbjct: 472 IDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRGRARKKGSKFALFL 531
Query: 501 KSGDSTTQSRL---ENYLASGNKMRKEVLSHASLPCSPLNN-HMYGEDFYHVESTGTIAT 556
S D T S L E + K L H L N G D + V STG + T
Sbjct: 532 HSEDRATSSELHLMEKTMKQLYLENKRTLEHIQY----LENVEEEGYDGFRVASTGALLT 587
Query: 557 LSSSVSLIYFYCSRLPSDGYFKPTPKFHI--------NKEMGICTLYLPNNCPIQTVIAQ 608
LS++ + + +C L ++ + P+F + + ++ + + P + ++
Sbjct: 588 LSNARNHLSHFCGTLSAE-FIATDPEFVLEGDDTTGFSAKVILPSFLDPKLREFRGILLW 646
Query: 609 GNIKTLKQAACLEACKKLHQIGALTDNLLP 638
K K+ A +A L++ G + D L+P
Sbjct: 647 KTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 48.9 bits (115), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD++L ++ L +P G LT + V+N A ++++ GL K IL
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLANAALQTGLDKFILT 1049
Query: 1246 ASHELYK-RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
K R + D + S K L D++E+L GA +D G N+
Sbjct: 1050 KPFTGAKWRPSYNTDHINTGDMTEPTREMST----KVLADVVEALIGAANIDGGENK 1102
>gi|347440704|emb|CCD33625.1| hypothetical protein [Botryotinia fuckeliana]
Length = 921
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 116/224 (51%), Gaps = 13/224 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY------AYLLRKPSPFVAVFLVP 76
R+YQLE E A KQN I L+TGSGKT IA++LLR + KP V+ FLV
Sbjct: 512 RDYQLELFEKAKKQNIIAVLDTGSGKTFIAVLLLRWIIDQELEDRAIGKPH-RVSFFLVD 570
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
V L QQ ++ + + G MG D D WK+ + + V+V T +IL L
Sbjct: 571 SVTLCHQQHSVLRNNLNQPTDMICGLMGTDLSDHIKWKKRLDTNMVIVCTAEILRQCLHH 630
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
S+ + I +LI DE HHA+ H YA I+ +FY E D LP+IFGMTASP+ ++
Sbjct: 631 SFVTMAQINLLIFDEAHHAKKDHPYARIIKDFYRNDTEK-DIALPKIFGMTASPVDAR-- 687
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
+ + +LE L++S++ T S+L I +Y
Sbjct: 688 ---DNVKKAAEELEGLLHSQICTAEDPSLLQYSIKGKPETLAYY 728
>gi|240275433|gb|EER38947.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
Length = 896
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 111/218 (50%), Gaps = 22/218 (10%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE E A N I L+T + P ++ FLV V LV
Sbjct: 94 REYQLELFEKAKAANIIAVLDTADRAS---------------GNPPRISFFLVDSVTLVY 138
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA +K + D + K+ G M D W TW++ SK+ ++V T ++L L S+ ++
Sbjct: 139 QQAAVLKANIDQNIDKFCGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRSFIRME 198
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
I +LI DE HHA+ +H YA I+ +FY R ET P+IFGMTASP+ +KV D
Sbjct: 199 QINLLIFDEAHHAKKEHPYARIVKDFYLRRPET--QKRPKIFGMTASPVDAKV-----DV 251
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY 240
+ +LETL++S++ T ++ L I T + Y
Sbjct: 252 AKAAKNLETLLDSQIATASNLDALRQAIARPTEQIWVY 289
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK--EVLSH 528
I+FD S T+ +IQSRGRAR NS Y MV+ + S ++ + + MR+ E L
Sbjct: 422 IVFDLSLTMIQYIQSRGRARHSNSIYAHMVERDNLIHASCIQEAQRAEHIMRRFCEALPE 481
Query: 529 ASL---PCSPLNNHMYGEDFYH---VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPK 582
+ L ++ E +Y V STG T SS+ ++ Y S L + P
Sbjct: 482 DRIIRGSSDDLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKETSPQVN 541
Query: 583 FHINKEMG--ICTLYLPNNCPIQTVIAQGNIKTL--KQAACLEACKKLHQIGALTDNLL 637
+ I + G +C LP P + + + + + L +Q+A E C L + G L D+ L
Sbjct: 542 YFIERIDGAFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILDDHFL 600
>gi|340727238|ref|XP_003401955.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like [Bombus
terrestris]
Length = 1957
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 125/251 (49%), Gaps = 24/251 (9%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE + Y F D S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1704 ELEKSIGYEFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQH 1763
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +V+ G HK+ H S L +I ++ F ++ G +
Sbjct: 1764 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQEENGHSI 1819
Query: 1271 GWE------------SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
E PKALGD+ ESLAGAI++DSG + + V+ +++ I
Sbjct: 1820 SEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQ 1879
Query: 1319 ETMRF--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKT 1376
+ P+REL E + KP + VTV+V G + + +
Sbjct: 1880 FSTNVPKSPIRELLE-LEPETAKFGKPEKLADGRRVRVTVDVFGKGSF---KGIGRNYRI 1935
Query: 1377 AKKVACKEVLK 1387
AK A K LK
Sbjct: 1936 AKCTAAKCALK 1946
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 160/668 (23%), Positives = 289/668 (43%), Gaps = 113/668 (16%)
Query: 383 RGV--EDIRC-IIFVERVITAIVLQSLLSE----------LLPRHCTWKTKYIAGNNSGI 429
RG+ D+ C +IFV + A VL LL+E L P + + + +
Sbjct: 430 RGITDPDLLCGVIFVNKAFVAKVLFYLLNEISMHDEDLRFLSPLYTIERNIEDISYSKDL 489
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ + RK Q E+++ FR N++++TSILEEG+D+ CN V+ +D +T S++Q + RA
Sbjct: 490 EIEHRK-QEEVLKRFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKTRA 548
Query: 490 RMQNSDYLLMVKSGDSTTQ-SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV 548
R ++ Y+L+V S +L Y + + ++ MY H
Sbjct: 549 RATDALYVLLVPQEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHY 608
Query: 549 E----STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPN 598
+ T +S++SL+ YC++LPSD + + TP++ I NK M C+L LP
Sbjct: 609 KPLDGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMVVDNKFMYTCSLRLPI 668
Query: 599 NCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPY 655
N P++ V+ N ++ A L+ C LH+ + DNLLP I E A+ P
Sbjct: 669 NSPVKYVVLSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLP-IGKENFKAK-----PE 722
Query: 656 NAEHPIYFPPE----LVNQSPQDTKITYHCY------------LIELKQHFNYDISARNI 699
+AE P P E P TK + Y +I + + Y I N+
Sbjct: 723 DAEVPA-LPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYL-YHI---NL 777
Query: 700 VLA--MRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP---------------NQV 742
VL+ + E + +++ E G + LK + ++ P Q
Sbjct: 778 VLSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQT 837
Query: 743 LLCRRFQITLFRVIMDH---NLDKLNEILDGFELRDNLEIDYLLLP-----STGQLIDWK 794
++ Q+ + +++ N+ +L + L F+ + E Y+++P + ++DW
Sbjct: 838 IVLNEMQVEKIAIFLNYTFTNVLRLQQYLMLFDPNAS-ENSYMIVPVKLDEQSDVIVDWN 896
Query: 795 TVATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC----TPHNGQIYCI 850
+ + R+ G T I K+ K H++++ + Q + +
Sbjct: 897 FLECIYKNRNAG-------PTKVPEEI--RKNFKFDASKYHDAVIMPWYRSQDQPQYFYV 947
Query: 851 TGVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYL 905
+ +LN S F ++ S T++++Y ++Y IQ+ +PLL+ R F Y+
Sbjct: 948 AEICTNLNPKSSFPGDDYS--TFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPRYV 1005
Query: 906 SK------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQS 955
++ ++ K + + E L ELC I P SL + +P I++R+ +
Sbjct: 1006 NRKGVALPTSSEETKRAKRENLEQKQILVAELCAIHPFPASL--WRQAVCLPCILYRINA 1063
Query: 956 LLLAVNLK 963
LLLA ++
Sbjct: 1064 LLLANQIR 1071
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GD FLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1427 ILQALTMSNANDGINLERLETIGDXFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1486
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1487 YRLGRQKMLGESMIATKFEPHDNWLPP 1513
Score = 43.5 bits (101), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 1140 QFQVHAE-RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 1198
+F H++ L + L N++ PSL+++ALT + +RLE +GD L
Sbjct: 1398 KFTYHSDSNLFSFDFQPELENHAGPSPSLILQALTMSN---ANDGINLERLETIGDXFLK 1454
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
Y IT YLY Y + G L+ +RS V+N
Sbjct: 1455 YAITTYLYCTYDNIHEGKLSHLRSKQVSN 1483
>gi|298711900|emb|CBJ48587.1| dicer-like 3 [Ectocarpus siliculosus]
Length = 1557
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 130/258 (50%), Gaps = 33/258 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY--LLRKPSP--FVAVFLVPKV 78
R YQ EA + A K N ++ TG GKTL+++ML+R + + R+ S +FL P
Sbjct: 4 RPYQAEAFDAARKANVVMVGATGVGKTLVSLMLIRDFYFEDARRRESKNHKWCIFLCPTQ 63
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS- 137
LV QQA++ ++ T ++ G Y G +D+W WKEEM EVLVMTP LL+ L
Sbjct: 64 ELVFQQAKSAQIFTGVRCGPYVGK-DLDYWGVKKWKEEMDNKEVLVMTPNALLNLLHRGN 122
Query: 138 -YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
Y L + VL+ DECH AR KH YA +M FY L + LP++FGMTASP V
Sbjct: 123 EYLSLKDVGVLVFDECHKARKKHPYARVMA-FYLELRKN-RGPLPKVFGMTASPTIECVE 180
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL---YTHL 253
++ K Y C + ++ F + A ++ Y+ + + Y HL
Sbjct: 181 ---------------VLQCKAYVC-EDDLIEEFQ--ANADWELLSYEAVVGPVLFSYQHL 222
Query: 254 ADELAMIELKHTRSLENL 271
AM +H R ENL
Sbjct: 223 GLWCAM---RHIRVAENL 237
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 165/351 (47%), Gaps = 68/351 (19%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNN----HEGLLSVKKERIISNAALCKLGCEQKL--- 1049
E LETLGD++L Y A F +Q+ EG++++ ++ ++SNA L K + L
Sbjct: 1165 ERLETLGDAWLNYYAG---FVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREF 1221
Query: 1050 ---PGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEAL 1106
P I FD MW + + K KT+ADVVEAL
Sbjct: 1222 MYPPRSILGRPFD--MWSP------------------SLLPLPPPVKASKKTIADVVEAL 1261
Query: 1107 IGAFLSTGGENVGLIFLDRIGIKVDFVN--------------VPYQRQFQVHAERLV-NV 1151
+GA L GG ++ +G+ +P + RL+ N+
Sbjct: 1262 LGAALVAGGNRSAAYIMEWLGLAAASAAATAAAAGEDPAAPPLPEVYVATKPSARLMGNI 1321
Query: 1152 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIP------RCYQRLEFLGDAVLDYLITVYL 1205
R LE L Y+FR P L ++A+TH S+ + +IP + YQRLEFLGDAVL +++T +L
Sbjct: 1322 RLLEKRLGYTFRYPWLCMQAITHPSWTINDIPPGTVPAQDYQRLEFLGDAVLGWMVTAHL 1381
Query: 1206 YNKYPGLSPGYLTDMR--SASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
Y +P LT ++ S+ V N + +++ +H H+L AS ++ I+ +++
Sbjct: 1382 YFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVH-HVLRASPKILGHIHAFIEN--- 1437
Query: 1264 LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGC--NREVVFQSIRPLL 1312
G + PK D++E+L GA+F+DS C N ++ + P +
Sbjct: 1438 ------NGVSGTGTAPKHPADVLEALIGAVFIDSSCCMNASLLLEGAPPRM 1482
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 21/242 (8%)
Query: 371 KIVCLIESLL---EYRGVE--DIRCIIFVERVITAIVLQSLLSELLP-RHCTWKTKYIAG 424
+++ L+++LL E G E + RC++FVER TA VL + LS L R C ++ G
Sbjct: 368 RVITLVKTLLRVSEQWGDEAKNFRCMVFVERRATARVLSAFLSHSLSGRFCC---GFVVG 424
Query: 425 N-NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
N+ R + + + FR G V ++V T EG+DV CNLV+ D +T S I
Sbjct: 425 RANARGDDFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLI 484
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
+RGRAR + +++MV+ GD + R+ L +++ L H H +
Sbjct: 485 HTRGRARSKGGKFVIMVEDGDDMERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPN 544
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQ 603
+H+ES+G + + + L+ S + D FH + IC L LP+ +
Sbjct: 545 MVHHIESSGAVVDMDMATPLMNQALSAVGCD--------FH---PLLICRLELPSFMGMP 593
Query: 604 TV 605
T+
Sbjct: 594 TI 595
>gi|260809266|ref|XP_002599427.1| hypothetical protein BRAFLDRAFT_249506 [Branchiostoma floridae]
gi|229284705|gb|EEN55439.1| hypothetical protein BRAFLDRAFT_249506 [Branchiostoma floridae]
Length = 672
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 238/543 (43%), Gaps = 63/543 (11%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ+E E AL+ +NTI+ TGSGKT +AI + R + L + VFLV KV LV
Sbjct: 2 RGYQMELAEQALQGRNTIICAPTGSGKTRVAIKITRDH--LEDVDARRRVVFLVNKVPLV 59
Query: 82 PQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ +A + K + G+ D G T + ++V+++T Q+L + LR
Sbjct: 60 EQQYKAFSEYLSPKYDILPLSGETAADIPVGET----LPDYDVIILTAQVLENALRDELI 115
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS-NLPRIFGMTASPIKSKVSSS 198
L+ +LI DECHH + Y IMT + + +E S +LP+I G+TAS K
Sbjct: 116 SLDTFSMLIFDECHHCQKNDPYNAIMTRYIKQKVEMKSSISLPQIIGLTASLGVGKAKGQ 175
Query: 199 EQDYWQKI---HDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLAD 255
++ + +L+ S+V E N P K E P A ++
Sbjct: 176 KEAVEHILGACANLDAAWISQVVEHKDELRKYNQKPDEEVK-PVSGRSEDPFADMINMIM 234
Query: 256 E-----LAMIELKHTRSLEN-------LDLNEAQAELIRKKVSKINSTLLYCLSELGVWL 303
E LA+ ELK R E + L A L K+VS+ L + L
Sbjct: 235 EDIEGTLAIEELKPPRQREKQAYEQWVVTLARKGAILKNKRVSRAIHAATTHLRKYFDAL 294
Query: 304 ALKA-AETISC--YESDFFAWEQLDGFGET---IIKKFGSDASQALVTYVPSGAEWSIGD 357
A+ A A T Y F Q GF ET ++K F ++A + L Y
Sbjct: 295 AINADARTKDALQYLDKFVTGLQEAGFDETDEDLVKHF-TEAKERLQEYAA--------- 344
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSE------LL 411
D K+ S +++ +I L Y D RC++F + I L + + E L
Sbjct: 345 DEKY---SNPKLDQLKYMI--LQAYEEKPDSRCLLFCKTRALTIALLTWMQEDPDLRKLN 399
Query: 412 PRHC--TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
P ++ G C ++ +Q E++E F G ++++TS+ EEG+D+ CN
Sbjct: 400 PGRLVGAGASESTGGEQLVNHCMTQNQQVELLEMFTTGGNKIVISTSVAEEGIDIAKCNF 459
Query: 470 VIMFDPSRTVCSFIQSRGRARMQNSDYLLMV-KSGDSTTQSRLENYLASGNKMRKEVLSH 528
V +D +Q+RGR R + S +L+ + G + + +L N +R++++
Sbjct: 460 VFRYDYVGNEIGKVQTRGRGRAEGSKSVLIAGREGGNVLKEKL-------NTIREKLMEK 512
Query: 529 ASL 531
A L
Sbjct: 513 AML 515
>gi|350423180|ref|XP_003493408.1| PREDICTED: endoribonuclease Dcr-1-like [Bombus impatiens]
Length = 1934
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE + Y F D S L++A TH SY + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 1679 ELEKSIGYEFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDGRQH 1738
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL--GSTF 1270
SPG LTD+RSA VNN +A +V+ G HK+ H S L +I ++ F ++ G +
Sbjct: 1739 SPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGL----SIVINRFVRIQQENGHSI 1794
Query: 1271 GWE------------SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
E PKALGD+ ESLAGAI++DSG + + V+ +++ I
Sbjct: 1795 SEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQ 1854
Query: 1319 ETMRF--HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANG 1362
+ P+REL E + KP + VTV+V G
Sbjct: 1855 FSTNVPKSPIRELLE-LEPETAKFGKPEKLADGRRVRVTVDVFGKG 1899
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 161/667 (24%), Positives = 290/667 (43%), Gaps = 111/667 (16%)
Query: 383 RGV--EDIRC-IIFVERVITAIVLQSLLSE----------LLPRHCTWKTKYIAGNNSGI 429
RG+ D+ C +IFV + A VL LL+E L P + + + +
Sbjct: 405 RGITDPDLLCGVIFVNKAFVAKVLFYLLNEISMHDKDLHFLSPLYTIERNIEDISYSKDL 464
Query: 430 QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRA 489
+ + RK Q E+++ FR N++++TSILEEG+D+ CN V+ +D +T S++Q + RA
Sbjct: 465 EIEHRK-QEEVLKRFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRA 523
Query: 490 RMQNSDYLLMVKSGDSTTQ-SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHV 548
R ++ Y+L+V S +L Y + + ++ MY H
Sbjct: 524 RATDALYVLLVPQEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHY 583
Query: 549 E----STGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI------NKEMGICTLYLPN 598
+ T +S++SL+ YC++LPSD + + TP++ I NK M C+L LP
Sbjct: 584 KPLDGDNAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIREMIVDNKFMYTCSLRLPI 643
Query: 599 NCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNEPY 655
N P++ V+ N ++ A L+ C LH+ + DNLLP I E A+ P
Sbjct: 644 NSPVKYVVLSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLP-IGKENFKAK-----PE 697
Query: 656 NAEHPIYFPPELVNQS---PQDTKITYHCY------------LIELKQHFNYDISARNIV 700
+AE P VN S P TK + Y +I + + Y I N+V
Sbjct: 698 DAEVPALPDESKVNFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYL-YHI---NLV 753
Query: 701 LA--MRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIP---------------NQVL 743
L+ + E + +++ E G + LK + ++ P Q +
Sbjct: 754 LSCPLPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQTI 813
Query: 744 LCRRFQITLFRVIMDH---NLDKLNEILDGFELRDNLEIDYLLLP-----STGQLIDWKT 795
+ Q+ + +++ N+ +L + L F+ + E Y+++P + ++DW
Sbjct: 814 VLNEMQVEKIAIFLNYTFTNVLRLQQYLMLFDPNAS-ENSYMIVPVKLDEQSDVIVDWNF 872
Query: 796 VATVLFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVC----TPHNGQIYCIT 851
+ + R+ G T I K+ K H++++ + Q + +
Sbjct: 873 LECIYKNRNAG-------PTKVPEEI--RKNFKFDASKYHDAVIMPWYRSQDQPQYFYVA 923
Query: 852 GVLGHLNANSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLN-----GRRIFHVQNYLS 906
+ +LN S F ++ S T++++Y ++Y IQ+ +PLL+ R F Y++
Sbjct: 924 EICTNLNPKSSFPGDDYS--TFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPRYVN 981
Query: 907 K------CRQQKQKEPSKISFE----LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSL 956
+ ++ K + + E L ELC I P SL + +P I++R+ +L
Sbjct: 982 RKGVALPTSSEETKRAKRENLEQKQILVAELCAIHPFPASL--WRQAVCLPCILYRINAL 1039
Query: 957 LLAVNLK 963
LLA ++
Sbjct: 1040 LLANQIR 1046
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L+A+T + +LE LET+GDSFLKYA + L+ TY N HEG LS + + +SN L
Sbjct: 1402 ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNL 1461
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIP 1066
+LG ++ L + F+P W+ P
Sbjct: 1462 YRLGRQKMLGESMIATKFEPHDNWLPP 1488
Score = 43.9 bits (102), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 1140 QFQVHAE-RLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLD 1198
+F H++ L + L N++ PSL+++ALT + +RLE +GD+ L
Sbjct: 1373 KFTYHSDSNLFSFDFQPELENHAGPSPSLILQALTMSN---ANDGINLERLETIGDSFLK 1429
Query: 1199 YLITVYLYNKYPGLSPGYLTDMRSASVNN 1227
Y IT YLY Y + G L+ +RS V+N
Sbjct: 1430 YAITTYLYCTYDNIHEGKLSHLRSKQVSN 1458
>gi|330797669|ref|XP_003286881.1| hypothetical protein DICPUDRAFT_150900 [Dictyostelium purpureum]
gi|325083116|gb|EGC36577.1| hypothetical protein DICPUDRAFT_150900 [Dictyostelium purpureum]
Length = 790
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 275/639 (43%), Gaps = 85/639 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+E + ++KQ+ I L TG GKTLI+ M+++ L P + +F+V ++ LV
Sbjct: 212 RPYQIEIFKESMKQDIICCLPTGLGKTLISCMVIKRMKEL--NPMKRI-IFMVDRIPLVQ 268
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ++ I T L+V GD + ++ +VLV+ +L++ + + LN
Sbjct: 269 QQSKVIAEETGLQVLAAHGDSFKNTQLSQSF-------DVLVIIGALLINLIINNEIDLN 321
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
+++ DE HH H +A + F E +N P++ G+TASP + ++D+
Sbjct: 322 HFCLIVTDEAHHIVKGHPFAVALKHFP----EIERTNRPKLLGLTASP------AGKKDF 371
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYT-HLADELAMIE 261
+ TL++ KV + AS K + PH L HL + ++
Sbjct: 372 ------ISTLISLKVISRASHC----------------KLIKAPHHLIEPHLNSKNTIVY 409
Query: 262 LKHTRSLEN--LDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFF 319
+LE LD+ E I+ S +N LL E V + + + +
Sbjct: 410 PIKVNNLERWCLDIVGNIMEEIQLSESALNE-LLSSADETLVERNKNIIDFLISFSNKLD 468
Query: 320 AWEQLDGFGET-------IIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKI 372
+ F +T + K S+ A + +I DD + L +
Sbjct: 469 TYMNFGDFSDTGVSNLKEFLNKEISNIPDARIKGKLRDLLNTIPDDELIAQNHSKLKMAL 528
Query: 373 VCLIESLLEYR---GVEDIRCIIFVERVITAIVLQSLLSELLPR--HCTWKTKYIAGNNS 427
L E + R G + R IIFV+ +A L +L+ + + K + G+ S
Sbjct: 529 TILNEFYQKNRNNDGSSNFRAIIFVKTRKSAARLVEILNVIKNKGDFSFLKPTIVVGHGS 588
Query: 428 -GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
S KQ + ++ FR+ N+IVATS++EEG DV CNLVI DP TV + IQSR
Sbjct: 589 KSNDGMSISKQKDAIDRFRQDKCNLIVATSVVEEGFDVPECNLVIRLDPPTTVTANIQSR 648
Query: 487 GRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK------EVLSHASLPCSPLNNHM 540
GR R ++S ++ +VK D R E S K + ++L+ ++P P N
Sbjct: 649 GRLRSKDSYFIGIVKECD-----REEGVYESFRKQEEFLDTAIDLLTTGTIP--PNFNFN 701
Query: 541 YGEDFYHVESTGTIATLSSSVSLIYFYCS---RLPSDGYFKPTPKFHINKEMGICTLYLP 597
D +T I ++ +S F +P G P+F C+LY+
Sbjct: 702 NYSDILIGSATQAIEEIAQRLSSAGFPMKLSWDIPQIGGSDHNPEFK-------CSLYI- 753
Query: 598 NNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNL 636
N+ I + IA+ K +++ A HQI + +L
Sbjct: 754 NDKYIHSTIAETKKKAKDKSSL--ALLSSHQIYIIIKDL 790
>gi|356552945|ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
Length = 345
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 114/187 (60%), Gaps = 7/187 (3%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E++L Y FR+ LL EALTH S++ Y+RLEF+GD VL I+ YL+ YP
Sbjct: 6 LEEVENILRYRFRNKKLLEEALTHSSFL---DGVSYERLEFVGDPVLSLAISNYLFLAYP 62
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
L PG L+ +R+A+V+ + A +V+ GLH+ + H++ L ++ VD+ KL +
Sbjct: 63 DLDPGQLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPLVDKVERFVDAV-KLEINPVA 121
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM--RFHPVRE 1328
SV + PK L D++ES+A AI+VD + + ++ +R +LEP++TP+ + + PV
Sbjct: 122 HGGSVKA-PKVLADVVESVAAAIYVDVNFDLQTLWVIMRGVLEPIVTPDALEKQPQPVTM 180
Query: 1329 LTEYCQK 1335
L E CQK
Sbjct: 181 LYEMCQK 187
>gi|240276002|gb|EER39515.1| dicer-like protein [Ajellomyces capsulatus H143]
Length = 800
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 201/464 (43%), Gaps = 78/464 (16%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F PSI+H ++ LLA L K +L ++++ V+
Sbjct: 242 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLLAEELNKTILRPVAFTDLSL----VI 295
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL HEGLLS K+ ++SN L
Sbjct: 296 TAISASAAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSY 355
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N D L + + ++++ +KT+ADV
Sbjct: 356 AAIETGLDKFILLDVFTGAKWRPP--------CNKDHLESEEQ--GVPQREMSTKTLADV 405
Query: 1103 VEALIGAFLSTGG----ENVGLIFLDRIGIKV--DFVNVPYQRQFQVHAERLVN-VRHLE 1155
VEAL+ A GG E IFL + D VN Y + + L + + +E
Sbjct: 406 VEALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDRVNALYSSVPEAYENTLTSWFQEVE 465
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
SL+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N P
Sbjct: 466 SLVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVYHLFNA-PR 519
Query: 1212 LSPGY-LTDMRSASVNNDCYA--------------------------LSSVKHGLHKHIL 1244
+ P + + MR+A N D A L++ K L +++
Sbjct: 520 ILPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTKLTTRKVSLWQYMR 579
Query: 1245 HA-SHELYKRINITVDSFEKLSLGSTFGWESVTSFP----------KALGDIIESLAGAI 1293
H S EL T + ++ L + E ++P K D+IES+ GAI
Sbjct: 580 HGTSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSRLHAQKFFSDLIESVLGAI 639
Query: 1294 FVDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTE 1331
F+DS C + + L M+ E M HP + L +
Sbjct: 640 FIDSHGSLDACTAFLERIGLMKFLRRMLVDEDMDLMHPKQRLGQ 683
>gi|260814153|ref|XP_002601780.1| hypothetical protein BRAFLDRAFT_76000 [Branchiostoma floridae]
gi|229287082|gb|EEN57792.1| hypothetical protein BRAFLDRAFT_76000 [Branchiostoma floridae]
Length = 1211
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 243/531 (45%), Gaps = 71/531 (13%)
Query: 23 RNYQLEALENAL-KQNTIVFLETGSGKTLI-AIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
R YQ E +AL +N I+ TGSGKTL+ A++ R+++ RK PF A+F+VP L
Sbjct: 541 REYQKELARSALLGKNAIITCATGSGKTLVSALVAERAWSEAKRKDLPFKALFIVPIRNL 600
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ + +M L V + GD E + K +++++T QI+++ L+
Sbjct: 601 TKQQKDQFEMLFPLGVVQEIGDT-------EELSETLKKRDIVMLTAQIVVNSLKAGSLD 653
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN-----LPRIFGMTAS------ 189
L + LILDECHH H Y IM + + E +N LP++ G+TAS
Sbjct: 654 LTDLDQLILDECHHTTLDHPYNQIMRYYLLKKAELALANPHQKSLPQVIGLTASLGVGGS 713
Query: 190 --------PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN-----FIPFSTAK 236
+ + + +S D+ ++ D + V+T + +LS PFSTA
Sbjct: 714 GNALQHLIELSASLDASRVDHVKENKD---ELRRHVFTPDAIHILSGQPRKPHDPFSTA- 769
Query: 237 FKFYKYDEIPHALYTHLADELAMIELKHTRSLENL---DLNEAQAELIRKKVSKINSTLL 293
D + L + + + + + T+ EN + EA+A+ +R ++ I + L
Sbjct: 770 -----LDSLMQRLESKVFPDTCPYD-RGTQQCENWIVERVKEAEAKTMRNEL--IVAQYL 821
Query: 294 YCLSE-LGVWLALKAAETISCYESDFF-AWEQLDGFGETIIKKFG----SDASQALVTYV 347
+ + L ++ L+AA+ I+ + + + +L G + I KF + L Y
Sbjct: 822 FDFNRALRLFTKLRAADAIAFLDEKMYQSRAELKGPPKLPIDKFCYQQFDQIREELCVYA 881
Query: 348 PSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLL 407
++ + + +L + LI+ E E ++ +R T ++Q +
Sbjct: 882 ---------EEEETQFPNPMLQQLRSLLIQKFNE---PESYGIVLTQQRRETEAIVQYVE 929
Query: 408 SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGL-----VNVIVATSILEEGL 462
+ + + + + + + +Q +++ FR+GL N++VAT + +EGL
Sbjct: 930 EQDVLQGKMRAKRLVGQGKLEDKAITDAQQMAVLKSFRKGLSSEDGCNLLVATDVAQEGL 989
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
D+ CN VI +D +Q+RGRAR ++++ L+V +G + + LEN
Sbjct: 990 DMPKCNFVIRYDFVSNEIGSVQARGRARAKDAECYLLVTAGSTNERRELEN 1040
>gi|156371137|ref|XP_001628622.1| predicted protein [Nematostella vectensis]
gi|156215603|gb|EDO36559.1| predicted protein [Nematostella vectensis]
Length = 261
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 111/195 (56%), Gaps = 18/195 (9%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
+E+ L Y+FRD +L++ALTH SY + Y++LEFLGDA+LDYL+T ++ ++P
Sbjct: 9 VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 68
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST-- 1269
LSPG +TD+RSA VNN A +++ HKH+ S L+K + V ++ T
Sbjct: 69 LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEKETRP 128
Query: 1270 -----------FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP 1318
G E++ PK LGD+ E+L GA++VD G + E+ + I PLL P+I
Sbjct: 129 DQLLLTTVEDGRGGEAI-EVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTPIIEH 187
Query: 1319 ETMRF--HPVRELTE 1331
++ P R+L E
Sbjct: 188 YSVHLPISPTRQLVE 202
>gi|325093360|gb|EGC46670.1| dicer-like protein [Ajellomyces capsulatus H88]
Length = 1436
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 198/463 (42%), Gaps = 76/463 (16%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNL-KNMLLDHCMQNVTIPTIKVL 982
P C I P+ S F PSI+H ++ LLA L K +L ++++ V+
Sbjct: 878 PASDCSIDKLPLEYSMFA--LLAPSIIHNVEIYLLAEELNKTILRPVAFTDLSL----VI 931
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI+ +E + + +E LGDS LK+ + QL HEGLLS K+ ++SN L
Sbjct: 932 TAISASAAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSY 991
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
E L FI + F W P N D L + + ++++ +KT+ADV
Sbjct: 992 AAIETGLDKFILLDVFTGAKWRPP--------CNKDHLESEEQ--GVPQREMSTKTLADV 1041
Query: 1103 VEALIGAFLSTGG----ENVGLIFLDRIGIKV--DFVNVPYQRQFQVHAERLVN-VRHLE 1155
VEAL+ A GG E IFL + D VN Y + + L + + +E
Sbjct: 1042 VEALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDRVNALYSSVPEAYENTLTSWFQEVE 1101
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
SL+ Y F LV+A TH P P YQRLEF+GDA+LD++I +L+N
Sbjct: 1102 SLVGYVFNKKVFLVQAFTH-----PSNPGSKTSSYQRLEFVGDAILDHIIVYHLFNAPRT 1156
Query: 1212 LSPGYLTDMRSASVNNDCYA--------------------------LSSVKHGLHKHILH 1245
L + MR+A N D A L++ K L +++ H
Sbjct: 1157 LPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKENTSTKLTTRKVSLWQYMRH 1216
Query: 1246 A-SHELYKRINITVDSFEKLSLGSTFGWESVTSFP----------KALGDIIESLAGAIF 1294
S EL T + ++ L + E ++P K D+IES+ GAIF
Sbjct: 1217 GTSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSRLHAQKFFSDLIESVLGAIF 1276
Query: 1295 VDS-----GCNREVVFQSIRPLLEPMITPETMRF-HPVRELTE 1331
+DS C + + L M+ E M HP + L +
Sbjct: 1277 IDSHGSLEACTAFLERIGLMKFLRRMLVDEDMDLMHPKQRLGQ 1319
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 375 LIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSG--- 428
L+ LLE D IIF ++ T ++L+ L+ RH K +++G +SG
Sbjct: 353 LLIDLLEKEYTSDFTGIIFAQQRSTV----TMLAHLISRHPRLKHMFLSGAFLGDSGYAG 408
Query: 429 -----IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
I+ K Q +++ R G N+++ATS+LEEG+DV +C+LVI FD + SFI
Sbjct: 409 RTSTIIELHDLKTQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVICFDTINNLRSFI 468
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQ----SRLENYLASGNKMRKEVLSHASLPCSPLNNH 539
Q RGRAR + S +++ + +GD +Q +++E+ + S M +E + + N
Sbjct: 469 QRRGRARKERSKFVMFL-NGDDNSQGKKWTKMEDVMKS---MYEEDMRRLEDVWAKENVE 524
Query: 540 MYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSD-GYFKPTPKFHINKEMGICT--LYL 596
++ + +ESTG + T ++ + +C+ L + +P F N+ G+ T + L
Sbjct: 525 EESDEDHRIESTGALLTFENARPHLEHFCATLQCEFTDTRPVFMFRENELDGMVTAKVLL 584
Query: 597 PNNCPIQTVIAQGNI-----KTLKQAACLEACKKLHQIGALTDNLLP 638
PN + + +G+ + ++ A +A KL+Q G + D+LLP
Sbjct: 585 PNVLDPKFRVIKGSKWWRTEQLAQRDAAFQAYLKLYQEGLVNDHLLP 631
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +L++N I+ ++TGSGKT +AI+ +R + FV FL P V L
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIR-HELETCAAHKFVW-FLTPTVALAE 105
Query: 83 QQAEAIKMH-TDLKVGKYWGDMGVDFWD-GATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ ++I + + G V++W W + + ++V TPQ+LLD + +
Sbjct: 106 QQHKSISQQLSAYETRLLLGSDNVNYWSTKKIWDDILLNIRIVVSTPQVLLDAMTHGFVT 165
Query: 141 LNMIKVLILDE 151
+ I +L+ DE
Sbjct: 166 MPQIALLVFDE 176
>gi|189199432|ref|XP_001936053.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983152|gb|EDU48640.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1439
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 211/459 (45%), Gaps = 54/459 (11%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE-LPPELCRIIMAPISLSTFYSFTFVPS 948
E + R+ +++L + K + E L C + P+S + F PS
Sbjct: 871 ETTIQAVRLPKRRDFLHPVSEHDNKNEAYTRIENLVASACTVENLPVSYAIF--GLLFPS 928
Query: 949 IMHRLQSLLLAVNLKNMLLDHC-MQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFL 1007
I+H+L+ ++A L+ LL+ + N+ +P + + A+T+ E + LE LGD L
Sbjct: 929 IVHKLEIYIVADTLRTTLLNPVEVDNLHLPIL--VTALTSSALNEGNDYQRLEFLGDCIL 986
Query: 1008 KYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPG 1067
K+ AS L EG+L+ KK +++SN L + L +I + F W
Sbjct: 987 KFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFHKRFTGAKW---R 1043
Query: 1068 DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG------LI 1121
S L + +L +++ SK +ADV+E+LIGA GG L+
Sbjct: 1044 PRYISQVLAESTL--------PEKQEKSSKLIADVIESLIGASYIIGGFPKAFACVQTLL 1095
Query: 1122 FLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPE 1181
L+R + ++ Y H + ++++ +E LL Y F + +LL+EALTH ++
Sbjct: 1096 PLERWTPLSEAKDILYDAA--PHQDTVMSLGLVEKLLGYKFTNKALLLEALTHVTFRGLN 1153
Query: 1182 IPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALS-------- 1233
Y+R EFLGDAVLDY+++ L+ P LS + +R+A VN A S
Sbjct: 1154 TNCSYERHEFLGDAVLDYIVSRRLFAHKPELSHRKMHGIRTAMVNASFLAYSMFETTVTD 1213
Query: 1234 ----------SVKH-GLHKHILHASHELY-KRINIT---VDSFEKLSLG----STFGWE- 1273
V H L + + S+ L RI T ++ E ++ G S F W
Sbjct: 1214 ELTNKDTLEPEVHHRALWQFLRSTSNALVASRIVATQQHAEAREIIATGLKHDSRFPWHA 1273
Query: 1274 -SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
S+T PK L DI+ES+ GA+++DS + + + +R L
Sbjct: 1274 LSLTDPPKYLSDIVESVIGALYIDSHGSIAICEEFVRRL 1312
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 34/296 (11%)
Query: 368 LTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
L++K+ L+++L+ E G D ++FVE+ + L +L+ C +TK++ G
Sbjct: 380 LSQKVNILVDTLVAEAEGNPDFTGLVFVEQRVWVASLAEILT------CHPRTKHLLRVG 433
Query: 425 NNSGIQCQSRKKQN-----------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
G S++K N +++FR G++N+++ATS+LEEG+DV SC+LVI F
Sbjct: 434 TFVGTSQSSKRKSNISVFAEPKNQQTTLDDFRAGIINLVLATSVLEEGIDVSSCHLVICF 493
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK---EVLSHAS 530
+ + + SF+Q RGRAR Q S YL+ V D++ ++++ + +MR+ +
Sbjct: 494 EQPKNLKSFVQRRGRARQQRSRYLVFVP--DNSNVQSVKSWQSLEAEMRRAYEDDKRKVR 551
Query: 531 LPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG 590
L YGE +ESTG + TL ++ ++ +C+RL S Y TP+F + G
Sbjct: 552 LAQEQEQVDEYGERHLRIESTGALLTLENASQHLHHFCARLGSGTYANITPEFDFTHDRG 611
Query: 591 ICT--LYLPNNCPIQTVIAQGNIKTL------KQAACLEACKKLHQIGALTDNLLP 638
T + LP + + A+ ++KT ++ EA K L+ + DNLLP
Sbjct: 612 QITAKVTLPISVDPKVRTAR-SLKTWVTERMAQKDVAFEAYKALYHTKLVNDNLLP 666
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 3 PVSMESDTTEEVSADTLPFA-RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAY 61
P+ ++S T ++ F R YQ E +E ++K N IV ++TGSGKT IAI R+
Sbjct: 4 PMHVDSTATASGASPCETFQLRAYQAEMVEESMKANIIVVMDTGSGKTHIAIERTRAELE 63
Query: 62 LLR--KPSPFVAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGAT-WKEEM 117
+ KP+ + FL P V L QQ E + G ++FW W +
Sbjct: 64 TCQPDKPTWKIVWFLAPTVSLCEQQHEVFLSNLPGFGHQILCGRDDIEFWTTQRHWDSIL 123
Query: 118 SKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD 177
+ ++V T Q+LL+ L + KL + +LI DE HH H +MT FY L
Sbjct: 124 TNVRIVVSTHQVLLEALTHGFVKLTKLALLIFDEAHHCTLNHPANQLMTNFYMPQLHDNR 183
Query: 178 SNLPRIFGMTASPIKSKVSSSE 199
++LP++ G+TASP+ V++ +
Sbjct: 184 NSLPKVLGLTASPVMKAVATRQ 205
>gi|281206201|gb|EFA80390.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 804
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 232/513 (45%), Gaps = 66/513 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ + A++ N I + TG GKT IA M++ + K +FLV ++ LV
Sbjct: 212 REYQKYFYKKAMEDNIICCIPTGLGKTQIAAMVICKMKQMNPKKR---ILFLVERIPLVL 268
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ + I+ T L V GDM +D A + H+VLV + L+ LR + +
Sbjct: 269 QQEKYIREQTGLNVLGVHGDMSID----AKLNDH---HDVLVSISALFLNLLRDNKGVME 321
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
+++ DE HH H ++ ++ + Y + D P++ G+TASP + +
Sbjct: 322 QYSLIVFDEAHHIVKDHSFSMLLKKHYKDM---EDDVKPKVMGLTASP-------AGKSS 371
Query: 203 WQKIHDLETLMNSKVYTCAS---------ESVLSNFIPFSTAKFKFYKYDEIPHALYTHL 253
W ++T ++ KV +C S E+ +TA+ + + + P Y L
Sbjct: 372 W-----IDTFISLKVMSCISGCRIISPDAETQADIEEHRNTAELQLVELQQHPKEKY--L 424
Query: 254 ADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
+ + I KH S E Q E I++ + K+ +T L L A C
Sbjct: 425 INAINCI-TKHFASSLVPTKKEYQYEDIQELLVKLENT-----DNEYEQLLLNVAN--KC 476
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALV-----TYVPSGAEWSIGDD-----SKFNL 363
Y+ + + D T+ D Q L+ T +P + + +D +F+
Sbjct: 477 YDLVTYGNDPKDAAHPTV------DYKQILINRFEATNIPKEKKQRLFEDLRAIPKEFDD 530
Query: 364 DSGLLTEKIVCLIESLLEYRGVED--IRCIIFVERVITAIVLQSLLSELLP--RHCTWKT 419
D K+ + ++LE + D + I+FV+ +A L +L+ R+ K
Sbjct: 531 DDTTNICKLDIAL-NILEEKNQTDPAFKAILFVKTRQSAEQLVKVLTTRAKEERYKFLKP 589
Query: 420 KYIAGNNSGIQC-QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
++G+ S QS Q +IVE+FR G NVIVAT++LEEGLDV CN+VI D T
Sbjct: 590 GKVSGHGSTKSGGQSTASQKDIVEKFRSGQHNVIVATAVLEEGLDVPECNVVIRIDSPAT 649
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRL 511
V ++ QSRGR R + S++ ++K +S + L
Sbjct: 650 VTAYTQSRGRLRSKKSEFYAILKDFESNIYANL 682
>gi|308469221|ref|XP_003096849.1| hypothetical protein CRE_24668 [Caenorhabditis remanei]
gi|308241264|gb|EFO85216.1| hypothetical protein CRE_24668 [Caenorhabditis remanei]
Length = 1030
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 247/564 (43%), Gaps = 86/564 (15%)
Query: 23 RNYQLEALENALKQ-NTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
RNYQ+E A++ NTIV TG+GKT++A ++++ + R+ F A+FL P +
Sbjct: 299 RNYQVELCRLAVQGINTIVTAPTGTGKTVVAANIVKNHFEVRAREEKTFKALFLAPNTTI 358
Query: 81 VPQQAEAIK---MHT-DLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL------ 130
+ QQA+ + H+ DLK+ + D + ++ + ++++V TPQ++
Sbjct: 359 LQQQADRLNHFLAHSYDLKICQ--------GSDNSPTRQAVLSNDIIVATPQMIVNLCNE 410
Query: 131 ----LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG----DSNLPR 182
L F L+ +++ DECH YA IM E YH L G + LP+
Sbjct: 411 HEDELSEFSNEKFYLSTFSIILFDECHSTVNNSPYANIMRE-YHTLKNMGTMPDNHELPQ 469
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMN-SKVYT-CASESVLSNFIPFSTAK-FKF 239
I G+TAS ++ E+ Q I + L++ K+ T C L F P K + F
Sbjct: 470 IVGLTASLGTGDANNVEK-AIQHIASMCALLDVEKLSTVCEYADELQMFSPIIPEKIYSF 528
Query: 240 YKYDEIPHALYTHLADELA-----MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY 294
K + + L ++ M+E E + + + V+ +N L
Sbjct: 529 EKNKDGSSGRFAELVRQMMDNITMMLETAFVSREEYSKVTNGEKTPAKDHVAYLN--WLS 586
Query: 295 CLSELGVWLALKAA-----ETIS----CYESDFF--------AWEQLDGFGETIIKKFGS 337
CL + E +S CY S F A++ D + +
Sbjct: 587 CLKRSVAEQNFQGNRNNINEALSMLDICYRSQSFNSNFNPRTAFKYFDEKVKEQERFLTE 646
Query: 338 DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL--EYRGVEDIRCIIFVE 395
+ L Y P + +G D + ++ IE LL +R ++ R IIFV+
Sbjct: 647 RMKEVLHQYYPRLEQ--LGSDVP-------IENPMILKIEDLLTENHRENQNSRAIIFVQ 697
Query: 396 RVITAIVLQSLLSE---LLPRHCTWKTKYIAGNNSGIQCQ-----SRKKQNEIVEEFRRG 447
AI L+++L + LL ++ +T YI G N + SR Q E +++F G
Sbjct: 698 TRYDAITLKNILCDNENLLSQNI--RTDYILGLNKTTEGSEDSAISRSDQVEKLKQFASG 755
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
+ V+V+TS+ EEGLD+ CNLVI ++ + V + +Q RGR R +S +L+
Sbjct: 756 GIRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGRGRANDSRSILITNDPSLEK 815
Query: 508 QSRLENYLASGNKMRKEVLSHASL 531
Q R NK KE +S A+L
Sbjct: 816 QER-------ANK-DKEKMSKAAL 831
>gi|258565145|ref|XP_002583317.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907018|gb|EEP81419.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1194
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 186/425 (43%), Gaps = 76/425 (17%)
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VL 982
P C I PI + F F+P ++H ++ L+A L +L + V + VL
Sbjct: 681 PASECTIDKLPIQYTRFT--LFIPCLIHNIEKTLIADELARTIL----RPVKFSDLSLVL 734
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
AI++ +E + + LE LGDS LK S +L EGLL+ +K ++SN+ L K
Sbjct: 735 TAISSSVAREASNYQRLEFLGDSLLKLYTSIELAAKNLQWPEGLLTSRKSHVVSNSHLAK 794
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS-KTVAD 1101
E L FI T+ F W P N+ D+ G +V S K +AD
Sbjct: 795 AATETGLDRFILTKPFSGAKW-RPSYNTDHVHAGDEE----------GSPRVMSTKVLAD 843
Query: 1102 VVEALIGAFLSTGGENVGL----IFLDRIGIKV--DFVNVPYQRQFQVHAERLVNVRHLE 1155
VVEALIGA G + L +FL I + V + Y+ E + + +E
Sbjct: 844 VVEALIGAANIDGADEKTLDCLKVFLPEINWSPLDESVGLLYRNATDSGDEYSMVLPEIE 903
Query: 1156 SLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
LL Y+F SL++ ALTH S YQRLEF+GD+VLD ++ L+ +
Sbjct: 904 ELLGYTFTKKSLVLAALTHPSSTTSR--HSYQRLEFIGDSVLDIIVVQALFGSPREFAHY 961
Query: 1216 YLTDMRSASVNND-----CY----------ALSSVKH--------------GLHKH---- 1242
+ MR+A VN D C A+ ++K G KH
Sbjct: 962 NMHLMRTALVNADFLAFLCMNVYVEKDRGEAVENIKKKVKIEMTKRKSHLWGFMKHSQSW 1021
Query: 1243 -ILHASH-------ELYKRINITVDSFEKLSLGSTFGWESVTSFPKA--LGDIIESLAGA 1292
I+HA + EL + IN E+L+ ++ W + A DIIES+ GA
Sbjct: 1022 DIVHAQNSAIKQHEELQEEIN------ERLNSSQSYPWTLLCRLDAAKFFSDIIESILGA 1075
Query: 1293 IFVDS 1297
IF+DS
Sbjct: 1076 IFIDS 1080
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 28/301 (9%)
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW 417
D +++ ++ K+ LI+ LE V IIF T ++L LLS L PR
Sbjct: 145 DEYLDVEPNEVSTKVNKLID-FLENEHVNGSIGIIFARERSTVVMLTHLLS-LHPR---- 198
Query: 418 KTKYI-----------AGNNSGI-QCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQ 465
TK+I A S I + + K Q +++ R G N+I+ATS+LEEG+DV
Sbjct: 199 -TKHIGTIAFLGSSSFASRKSDITELHNTKAQMTALDDLRNGKKNLIIATSVLEEGIDVP 257
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEV 525
+C+LVI FD + + SFIQ RGRAR + S + L V D S L+ + + E
Sbjct: 258 ACDLVICFDFPQNLRSFIQRRGRARKKGSKFALFVDIQDHAAISTLKAVEETMKGLYLEN 317
Query: 526 LSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI 585
G D + ++STG + TLS++ + + +C L + Y P F +
Sbjct: 318 ERTLEELQLLEEAEEDGYDGFRIKSTGALLTLSNARNHLSHFCGILACE-YADTEPTFMV 376
Query: 586 --------NKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLL 637
+ ++ + + P + + + K+ A +A L++ G + D L+
Sbjct: 377 QGDELSGLSAKVILPNFFEPRLREFRGISTWRTERMAKRDAAFQAYVALYKAGLVNDYLM 436
Query: 638 P 638
P
Sbjct: 437 P 437
>gi|167046039|gb|ABZ10551.1| dicer 2 [Nematostella vectensis]
Length = 1162
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 119/220 (54%), Gaps = 22/220 (10%)
Query: 1133 VNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY--MLPEIPRCYQRLE 1190
+N +Q + +L + +E+ L Y+FRD +L++ALTH SY + Y++LE
Sbjct: 917 INKQHQTTAVLSEHQLGELALVEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLE 976
Query: 1191 FLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
FLGDA+LDYL+T ++ ++P LSPG +TD+RSA VNN A +++ HKH+ S L
Sbjct: 977 FLGDALLDYLVTRHVLQRFPRLSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMAL 1036
Query: 1251 YKRINITVDSFEKLSLGST-----------------FGWESVTSFPKALGDIIESLAGAI 1293
+K + V ++ T G E++ PK LGD+ E+L GA+
Sbjct: 1037 FKVVRRFVRRLSEIEEKETRPDQVYSKLLLTTVEDGRGGEAI-EVPKVLGDLFEALLGAL 1095
Query: 1294 FVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTE 1331
+VD G + E+ + I PLL P+I ++ P R+L E
Sbjct: 1096 YVDCGRDEELAWSVIYPLLTPIIEHYSVHLPISPTRQLVE 1135
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 37/187 (19%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
+L A+TT + E LE GD+F+KYA S+ L+ + N +EG LS + +SN L
Sbjct: 584 ILRALTTTSANDIIDHERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGLRVSNQQL 643
Query: 1041 CKLGCEQKLPGFIRTESFDP-KMWIIPG-------------DNSGSYELND-------DS 1079
LG + L I T+ F+P W+ PG D S + +ND DS
Sbjct: 644 FYLGRSRGLAPLILTKPFEPVGSWVPPGFSSSSMRNVHETLDVSPQHGVNDVLNIDDEDS 703
Query: 1080 LFNGRKIYVTGRK----------------KVKSKTVADVVEALIGAFLSTGGENVGLIFL 1123
L + ++G + + KTVAD +EALIGA L + G N L +
Sbjct: 704 LDHSEIQDISGNECRGNVEPMLLPPHTFTVISDKTVADTIEALIGACLMSSGTNAALRLM 763
Query: 1124 DRIGIKV 1130
+ + V
Sbjct: 764 RWLDMDV 770
Score = 48.1 bits (113), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 872 TYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYL------SKCRQ-----QKQKEPSKIS 920
T+ +Y++RYG+ L D +PLL+ + N+L SK + +K K +
Sbjct: 344 TFGDYYKDRYGVDLSRD-QPLLDVDHVSSRLNFLRPRYKTSKGKDLALPDEKSKRSQRSR 402
Query: 921 FELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML 966
L PE+C I PI S + T +PSI++R+ +LL+A L+ L
Sbjct: 403 VSLVPEMCSI--HPIPGSLWRDITNMPSILYRVDALLIAEELRQKL 446
>gi|449299331|gb|EMC95345.1| hypothetical protein BAUCODRAFT_46072, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1298
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 151/296 (51%), Gaps = 22/296 (7%)
Query: 378 SLLEYRGVEDIRCIIFVER--VITAIVLQSLLSELLPRHCTWK----TKYIAGNNS-GIQ 430
SLL ++R I+FV+ V+TA+V +E L H + T G +S
Sbjct: 356 SLLAAYASPEVRAIVFVKERAVVTALVHLLRNAEQLRGHYSIGSFVGTSTFEGRSSLADL 415
Query: 431 CQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRAR 490
R++QN+++ FRRG N+IVATS+LEEG+DV +CNLVI FD T +F+Q RGRAR
Sbjct: 416 ADPRQQQNDLLG-FRRGDKNLIVATSVLEEGIDVSACNLVINFDQPDTFIAFLQRRGRAR 474
Query: 491 MQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF--YHV 548
+NS Y L+V D T++ + A KM++E S + + + + Y V
Sbjct: 475 QENSRYFLLVSEDD--TRASASKWQAEEAKMKREYESARAERAAAEAEDVQALNARSYRV 532
Query: 549 ESTGTIATLSSSVSLIYFYC-SRLPSDGYFKPTPKFHINK---EMGICTLYLPNNCPIQT 604
ESTG + T++ + + +Y +C + + ++ Y P F+ + ++ LP+
Sbjct: 533 ESTGALLTINDAKAHLYHFCNTSVQANNYVDTEPDFYAVRGKDNAWTASVTLPSYVHPDV 592
Query: 605 VIAQGNIKTLKQA-----ACLEACKKLHQIGALTDNLLPDIVVEKHDA-QKRGNEP 654
A + +A A EA LH+ G LTDNLLP V + +A Q R ++P
Sbjct: 593 RSAASRDRWSSEAGAIKDAAFEAYVALHKAGLLTDNLLPLTEVHECEAFQGRSDQP 648
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 192/453 (42%), Gaps = 76/453 (16%)
Query: 907 KCRQQKQKEPSKI-SFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLK-- 963
+ RQ + +K SF L E C + P+ + F +F +PSIMH++ L ++
Sbjct: 840 QARQHSNQAYTKEESFAL--EDCTVEKTPLRSARFAAF--IPSIMHQVDVRLTVQEMQHS 895
Query: 964 NMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNH 1023
++L D ++N + + EAI+ E LE LGD+ LK+ S + +
Sbjct: 896 SVLQDLQLKNGDL----IQEAISAPSAAEKSDYNRLEYLGDALLKFWVSINVMVLHPTWP 951
Query: 1024 EGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNG 1083
E L+++K R +SN L + +L +I T+SF W
Sbjct: 952 EKYLTMEKSRRVSNNTLAQAAHNLQLNRWILTKSFTGTKW-------------------- 991
Query: 1084 RKIYVT--------GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNV 1135
R IY + K++ SKT+ADVVEALIGA GG + + + +
Sbjct: 992 RPIYASEVLRTDFSQPKQISSKTLADVVEALIGAAYLDGGYQNAYTCIRSLLKQCWSEHY 1051
Query: 1136 PYQRQFQVHAERLVNVR---HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
+ H E+ + L + + FR P LL+EALTH S Y+RLEFL
Sbjct: 1052 LICSSLRGHMEQTAADQVSSDLGRFIGHHFRFPYLLIEALTHASLPFQRRMMSYERLEFL 1111
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVN-----------------------NDC 1229
GDAVLD +I YL L + D+ A VN D
Sbjct: 1112 GDAVLDAIIVPYLCGNARKLKASEMHDIHEALVNEHFLGYCCLNAKIEQEYRTVEKTGDG 1171
Query: 1230 YALSSVKHGLH-KHILHASHELYKRINITVDSFEK--------LSLGSTFGWESVTS--F 1278
+ +S+ L + A +L K + + +F++ L+ G + W + +
Sbjct: 1172 HDVSTATRTLKLADFIRAGGQLLKAKQVAMANFDRYQDAVATALADGEEYPWPDLIAMNL 1231
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
PKA D++ES+ GA+++D+ + V Q + L
Sbjct: 1232 PKAFSDVVESVLGALYIDTDGDMSVCEQFVAKL 1264
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 13/173 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV-FLVPKVVLV 81
R YQ E LE +L N I+ + TGSGKTL+AI +R + L +P + FL V L
Sbjct: 6 RAYQREMLEASLCGNRII-MPTGSGKTLVAIARIR---HELETSTPTKLIWFLANSVELC 61
Query: 82 PQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
Q E +K+H + + G+ GVD W + W +S V++ TP +L D L ++
Sbjct: 62 RQHLETLKLHLSAYPILSLTGEAGVDAWSEQRLWDAVLSDVRVVIGTPAVLKDALSHAFV 121
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN--LPRIFGMTASP 190
+++ + +L+ DE HH H IM FYH G+S+ +P I G+TASP
Sbjct: 122 RMSRLALLVFDEAHHCIKNHPMNAIMQHFYH----PGNSHKEVPHILGLTASP 170
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
Y RLE+LGDA+L + +++ + +P YLT +S V+N+ A ++ L++ IL
Sbjct: 924 YNRLEYLGDALLKFWVSINVMVLHPTWPEKYLTMEKSRRVSNNTLAQAAHNLQLNRWILT 983
Query: 1246 ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
S K I + L + F S K L D++E+L GA ++D G +
Sbjct: 984 KSFTGTKWRPI----YASEVLRTDFSQPKQIS-SKTLADVVEALIGAAYLDGGYQN--AY 1036
Query: 1306 QSIRPLLE 1313
IR LL+
Sbjct: 1037 TCIRSLLK 1044
>gi|149408137|ref|NP_001092258.1| probable ATP-dependent RNA helicase DHX58 [Rattus norvegicus]
Length = 678
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 230/527 (43%), Gaps = 70/527 (13%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT A + + + + + V LV +V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK---VVVLVNRVHLV 60
Query: 82 PQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q AE + D K W GDMG G + H++L+ T ++L L+
Sbjct: 61 NQHAEEFRRMLD----KQWTVTTLSGDMGSRAGFGLLAR----SHDLLICTAELLHLALK 112
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
S + +L ++++DECHH Y I++ + L+ LP++ G+TASP
Sbjct: 113 SSEEDEHVELTEFSLIVVDECHHTHKDTIYNTILSRYLEHKLKKAKP-LPQVLGLTASPG 171
Query: 192 ---KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDE 244
+K+ + Q +L+T C S+ + N P + + +
Sbjct: 172 TGGATKLQGAIDHILQLCANLDTWRIMSPKNCYSQLLEHNPKPCKQYDLCQRRTQDPFGD 231
Query: 245 IPHALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKVSKIN----STLL 293
+ L + +L M +LK + + + L + A+A L ++V ++ + L
Sbjct: 232 LLKKLMKQIHQQLEMPDLKQQFGTQMYEQQVVQLSKDAAEAGLQEQRVYALHLRRYNDAL 291
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
Y + W AL + Y+++ Q+ +++ F D +AL + G E
Sbjct: 292 YIHDTVRAWDALNMLQDF--YDTERALKTQMVHAERWLLELF-DDHRKALAQFAAQGPE- 347
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ K + G+L L ++ + R IIF TA SLL L +
Sbjct: 348 ----NPKLEMLEGIL----------LKQFGSPDHTRGIIFTRTRQTA---SSLLLWLRQQ 390
Query: 414 HCTWKTKYI-------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
C +T I AGN ++K Q E+++EFR G +N++VATS+ EEGLD+
Sbjct: 391 PCL-QTVNIKPQMLIGAGNTGQSTHMTQKDQQEVIQEFRDGKLNLLVATSVAEEGLDIAQ 449
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
CN+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 450 CNVVVRYGLLTNEISMVQARGRARAGQSVYSFVATEGSREIKRELTN 496
>gi|308455471|ref|XP_003090269.1| hypothetical protein CRE_17662 [Caenorhabditis remanei]
gi|308265013|gb|EFP08966.1| hypothetical protein CRE_17662 [Caenorhabditis remanei]
Length = 907
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 248/564 (43%), Gaps = 86/564 (15%)
Query: 23 RNYQLEALENALKQ-NTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
RNYQ+E A++ NTIV TG+GKT++A ++++ + R+ F A+FL P +
Sbjct: 176 RNYQVELCRLAVQGINTIVTAPTGTGKTVVAANIVKNHFEVRAREEKTFKALFLAPNTTI 235
Query: 81 VPQQAEAIK---MHT-DLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL------ 130
+ QQA+ + H+ DLK+ + D + ++ + ++++V TPQ++
Sbjct: 236 LQQQADRLNHFLAHSYDLKICQGS--------DNSPTRQAVLSNDIIVATPQMIVNLCNE 287
Query: 131 ----LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG----DSNLPR 182
L F L+ +++ DECH YA IM E YH L G + LP+
Sbjct: 288 HEDELSEFSNEKFYLSTFSIILFDECHSTVNNSPYANIMRE-YHTLKNMGTMPDNHELPQ 346
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMN-SKVYT-CASESVLSNFIPFSTAK-FKF 239
I G+TAS ++ E+ Q I + L++ K+ T C L F P K + F
Sbjct: 347 IVGLTASLGTGDANNVEK-VIQHIASMCALLDVEKLSTVCEYADELQMFSPIIPEKIYSF 405
Query: 240 YKYDEIPHALYTHLADEL-----AMIELKHTRSLENLDLNEAQAELIRKKVSKIN--STL 292
K + + L ++ M+E E + + + V+ +N S L
Sbjct: 406 EKNKDGSSGRFAELVKQIMDNITMMLETAFVSREEYSKVTNGEKTPAKDHVAYLNWLSCL 465
Query: 293 LYCLSEL-------GVWLALKAAETISCYESDFF--------AWEQLDGFGETIIKKFGS 337
++E + AL + CY S F A++ D + +
Sbjct: 466 KRSVAEQNFQGNRNNINEALNMLDI--CYRSQSFNSNFNPRTAFKYFDEKVKEQERFLTE 523
Query: 338 DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL--EYRGVEDIRCIIFVE 395
+ L Y P + +G D + ++ IE LL +R ++ R IIFV+
Sbjct: 524 RMKEVLHQYYPRLEQ--LGSDVP-------IENPMILKIEDLLTENHRENQNSRAIIFVQ 574
Query: 396 RVITAIVLQSLLSE---LLPRHCTWKTKYIAGNNSGIQCQ-----SRKKQNEIVEEFRRG 447
AI L+++L + LL ++ +T YI G N + SR Q E +++F G
Sbjct: 575 TRYDAITLKNILCDNENLLSQNI--RTDYILGLNKTTEGSEDSAISRSDQVEKLKQFGSG 632
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
+ V+V+TS+ EEGLD+ CNLVI ++ + V + +Q RGR R S +L+
Sbjct: 633 GIRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGRGRANGSRSILITNDPSLEK 692
Query: 508 QSRLENYLASGNKMRKEVLSHASL 531
Q R NK KE +S A+L
Sbjct: 693 QER-------ANK-DKEKMSKAAL 708
>gi|321477029|gb|EFX87988.1| hypothetical protein DAPPUDRAFT_311480 [Daphnia pulex]
Length = 711
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK---PSPFVAVFLVPKVV 79
R+YQ+E + AL +N IV+L TGSGKT IA +L++ ++ + K VFLVP +V
Sbjct: 28 RDYQIELFQAALDENIIVYLPTGSGKTYIAALLIKEKSHEVAKSLSAGGKRTVFLVPTIV 87
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
L QQA ++ HT LKV +++G MGVD W W+ E + VLVMT QI +D L ++F
Sbjct: 88 LAIQQAAYLRKHTLLKVKEFYGSMGVDMWGRNKWETEFETNHVLVMTAQIFVDILNHAFF 147
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ +L+ DECH A ++T +L + P+I G+TA+ + + E
Sbjct: 148 SPYQLNLLVFDECHSAVKDAPMKQVLT----KLRSCDVARRPKILGLTAALFRKRCKPRE 203
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 138/311 (44%), Gaps = 75/311 (24%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTW---KTKYIAGNNSGIQCQSRKKQ------NEIV 441
IIFVER A VL L ++ K + G +G R+ Q +I+
Sbjct: 407 IIFVERRSVASVLYHFLKDIRQHDENLEFVKPLFTMGQAAGSASSLRESQILNMNQKDIM 466
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
+FR G N++VATS+LEEG+D+ CNL++ FD RT C ++Q++GRAR + + + ++V
Sbjct: 467 RDFRSGNCNLLVATSVLEEGVDIPECNLIVRFDKIRTYCDYVQTKGRARSKKAFFCMLVS 526
Query: 502 SGDSTT--------QSRLENYLASGN------KMRKEVLSHASLPCSPLNNHMYGEDFYH 547
S DS + + +A+GN + + S P +P N
Sbjct: 527 SSDSKKFLEDMAQFHAIEQQLVATGNFEDDKDAILDNLFSQIIEPYTPYGNQ-------- 578
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN-------------------KE 588
G TL SS+SL+ YCS+L S G P++ I K+
Sbjct: 579 ----GPRVTLQSSISLVNRYCSQLVSYGASVLVPRWSIKEVDESKADPLMLKKMKELMKQ 634
Query: 589 MGI-----------------CTLYLPNNCPIQTVIAQGNIKT---LKQAACLEACKKLHQ 628
+ + C L LP + P+Q + + T K+AA L AC++LHQ
Sbjct: 635 LPVVKPLSTKEPAEKIALFQCRLLLPKSSPLQGEVVGDPMLTKRLAKRAAALRACERLHQ 694
Query: 629 IGALTD-NLLP 638
+ L D +LLP
Sbjct: 695 LKELDDLHLLP 705
>gi|328849595|gb|EGF98772.1| hypothetical protein MELLADRAFT_79606 [Melampsora larici-populina
98AG31]
Length = 1540
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 3 PVSMESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYL 62
P + + +S + P R YQ E LE A ++N I+ +TG+GKTL+A++L+ A
Sbjct: 13 PTTTQESEQGVLSGNKCP--RLYQEELLEEAKRRNIIIRADTGTGKTLVAVLLMDWMAVQ 70
Query: 63 LRKPSP--FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH 120
+ + FLVP LV QQA AI+ T L+V +Y GD+ + W+ W ++ +
Sbjct: 71 PKGDDQEHTIQAFLVPTRPLVQQQASAIRSGTTLRVREYTGDLQPELWNVEKWHSDLKQT 130
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SN 179
+V+V T QI D L ++ L + +L+ DE HH R H Y IM Y RL D
Sbjct: 131 DVIVCTAQIFYDILSKGFWTLENVSLLVFDEAHHCRKNHIYNQIMQVHYRRLDRDPDHRR 190
Query: 180 LPRIFGMTASPI 191
+P+I G+TASPI
Sbjct: 191 VPKILGLTASPI 202
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 189/401 (47%), Gaps = 56/401 (13%)
Query: 943 FTFVPSIMHRL------QSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHL 996
F+F+P++ RL Q+LL +++ ++ LD +T P I V +
Sbjct: 906 FSFIPALTRRLHDASQVQALLKKIDVPHVSLDLATMALTQPGIDV-----------PWDY 954
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
++LET+GD+FLK A S ++ ++ EG +S + + + N L + L ++ +
Sbjct: 955 QTLETVGDAFLKLATSVHVYLSHTKKGEGDMSALRSKSVDNEYLRSKSLQAGLGSYVLSS 1014
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGE 1116
+ D + L+D L ++ ++K+ + ++D+VEAL+GA L +GG
Sbjct: 1015 RYR-------TDTFRAAHLDDGPLLPTGEV----QRKIPRRVLSDIVEALLGAGLLSGGI 1063
Query: 1117 NVGLIFLDRIGIKVDF---------------VNVPYQRQFQVHAERLVNVRHLESLLNYS 1161
L +IG ++D ++ PY ++ + L+ + Y
Sbjct: 1064 QTAL----KIGTELDLCFGGVTPWTERPCKALDEPYPDA--ASSQWTKSHTALQHKIGYE 1117
Query: 1162 FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMR 1221
F+ P LL++ALTH S + CY+R E+LGDA++D IT + Y ++ + LT R
Sbjct: 1118 FKQPLLLMQALTHRS-ADSFLTNCYEREEWLGDAIVDLWITEHCYRRFSDSTAAQLTFTR 1176
Query: 1222 SASVNNDCYALSSVKH-GLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSF-- 1278
++ V N S+K GLHK I H S K + + E +F SF
Sbjct: 1177 ASLVTNASLGYLSLKKLGLHKMIQHDSRHFEKACDDALRDIESFIEVGSFYDNLTNSFIV 1236
Query: 1279 ---PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
PK LGD +E++ GAIF+D G + V ++S+ + E ++
Sbjct: 1237 FDPPKILGDALEAIVGAIFIDCGLHLSVAYRSLDKIFEDVL 1277
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 129/299 (43%), Gaps = 64/299 (21%)
Query: 369 TEKIVCLIESLLEYRGV--EDIRCIIFVERVITAIVLQSLLSE-------LLPRHCTWKT 419
T K L++ L +Y + ED IIFVER A +L SL+S + P T
Sbjct: 372 TPKFQALVKILSKYENMKAEDFHAIIFVERRTHAQLLNSLISRCAKLKGFIKPGALTGHG 431
Query: 420 KYIA--GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+A G N G+ +S QN+ VE+FR +N+ +AT++ EEGLD ++C LVI FD
Sbjct: 432 GTVASSGGNRGMDSKS---QNQTVEKFRNREINLAIATNVAEEGLDFRACRLVIRFD--- 485
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSP-- 535
D TT E + E +S A L +P
Sbjct: 486 --------------------------DITTWKGEELRTQLYGRPEDEEISDAELESTPQL 519
Query: 536 LNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKP-TPKFHINKEMG--IC 592
+N+ G+D I T ++SVSL+ C LP D Y + PKF + G +C
Sbjct: 520 INSLGDGKD--------AILTHNASVSLLNEVCQLLPHDEYAEILKPKFEDIQRSGGFVC 571
Query: 593 TLYLPNNC---PIQTVIAQGNI---KTLKQAACLEACKKLHQIGALTDNLLPDIVVEKH 645
+ LP P + V KQ+AC AC+ L G L ++ +P + E+H
Sbjct: 572 RVTLPPMAALSPSERVFESEPFTKKNKAKQSACFIACRALRSAGVLDEHFMP--LRERH 628
>gi|297737474|emb|CBI26675.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 15/252 (5%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
+V +E ++NY FR+ LL EALTH SY YQRLEF+GDA L ++ Y++
Sbjct: 3 ASVEAVERIINYKFRNKKLLEEALTHSSYT---DSASYQRLEFIGDAALGCALSNYVFLA 59
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP L PG L+ +R+A+++ + A +V+ GL++++ H + L ++ + ++ G
Sbjct: 60 YPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQE--EGD 117
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPV 1326
+ + PK L DI+ES+A AI+VD + +V++ R LLEP++T E ++ PV
Sbjct: 118 SVLYGGSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPV 177
Query: 1327 RELTEYCQKN--HFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKE 1384
L E CQK+ H +K R K +V V G F + +K+ AK A KE
Sbjct: 178 TLLYELCQKDGKHVDIKH---WRKGSKNIASVYV---GGKFIASGSSDEKEIAKLNAAKE 231
Query: 1385 VLKSLRASFPGT 1396
L+ L + T
Sbjct: 232 ALQKLSSKLKDT 243
>gi|343428057|emb|CBQ71581.1| related to cell cycle control protein dicer [Sporisorium reilianum
SRZ2]
Length = 1683
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 39/246 (15%)
Query: 9 DTTEEVSADTLPFA-RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR---------- 57
D ++++ +D L F R+YQLE E A N +V L+TGSGKTLI+++LL+
Sbjct: 56 DPSDQLRSDQLAFVPRSYQLELAELAKAGNVLVCLDTGSGKTLISVLLLQHVHEVQNAQR 115
Query: 58 -----SYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMG-------- 104
P V+ FLV V LV QQ+ I H++L VGK +G++
Sbjct: 116 PPSPPQSPAPPAPQRPKVSFFLVNLVPLVHQQSSVIAGHSNLSVGKLYGELKDTVRGKGN 175
Query: 105 ---VDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQY 161
VD W W + H+V+V T Q LD L + K++ + +LI DE HHA H +
Sbjct: 176 KLTVDGWREPQWSALLESHQVIVSTAQCFLDALIHGFIKMDDLNLLIFDEVHHALKNHPF 235
Query: 162 ACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS--SSEQDYWQKIHDLETLMNSKVYT 219
IM Y+RL + P+IFGMTASPI + Y QK+ MN++++T
Sbjct: 236 FRIMK--YYRL--APEKERPKIFGMTASPIFTSTGQFDDASRYLQKV------MNARIHT 285
Query: 220 CASESV 225
+ +++
Sbjct: 286 VSKDTL 291
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 195/448 (43%), Gaps = 62/448 (13%)
Query: 361 FNLDSGLLTEKIVCLIESLLEYR-GVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK- 418
D+ + K++ LIE+L + D IIFVER TA +LL EL+ R +
Sbjct: 487 LTFDASNTSHKVLRLIETLKCFEPSAADFCAIIFVERRQTA----TLLVELIKRVAGLEF 542
Query: 419 --TKYIAGN-----NSGIQCQSRKKQNEIVEEFRR-GLVNVIVATSILEEGLDVQSCNLV 470
+++ G+ N G Q +++ FRR N++VATSI EEGLD+Q+ NLV
Sbjct: 543 IHPEFLLGHENGSANGGAPGMDWHDQVQVLNRFRRRKPTNLLVATSIAEEGLDIQAANLV 602
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST-TQSRLENYLASGNKMR-----KE 524
+ FD SF+QSRGRAR + S ++LM + +++ Q+ L + ++ + E
Sbjct: 603 VRFDLFNRHISFLQSRGRARAKQSRFILMAERDNASHAQAILNAFNTEASRAKWLEGIAE 662
Query: 525 VLSHASLPCSPLNNHM--------YGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGY 576
A + + GE+ STG + SL+ Y + L S+ Y
Sbjct: 663 AEHDAGFYAQEWQHQLRVERDEAGAGEECIFEPSTGARLFPEDAPSLVSHYAATLHSE-Y 721
Query: 577 FKPTPKFH----INKEMGI-----CTLYLPNNCPIQTVIAQGNIKTLKQA---ACLEACK 624
K + I G+ CTL LP+ +++V G ++ KQA +AC+
Sbjct: 722 LKDAVLAYKLDSIPHGFGVPSTFSCTLELPSTSAVRSV-ESGEYRSKKQAKRMVAFKACQ 780
Query: 625 KLHQIGALTDNLLPDIVVEKH--DAQKRGNEPYNAEH--------PIYFPPELVNQ---- 670
+L +G L D L+P ++ + + G NA H P++ P + ++
Sbjct: 781 QLRDMGELDDYLMPKLLDKAAVLEGAGVGTRKVNAHHKAWRGSGLPVHVPVKNMDGWARF 840
Query: 671 -SPQDTKITYHCYLIELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNL 729
+ Q + Y + L + +D + + +VL R L R + V
Sbjct: 841 VAAQSSDAAYEATYLALDE---FDAACQPLVLLTRGALPPTKLLKLLLPGAGRMK-DVKA 896
Query: 730 KHLGRIQLIPNQVL-LCRRFQITLFRVI 756
LG +Q + + L +RF +FR++
Sbjct: 897 TPLGPLQALSEEELESAKRFTRFVFRML 924
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 164/378 (43%), Gaps = 31/378 (8%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
VLEA+T+ F E LE LGD+FLK A+ F T+ E L + + I++N L
Sbjct: 1147 VLEALTSPAAGSSFDYERLEFLGDTFLKLVATCHTFTTHLGRTEAELHLANKAILTNVRL 1206
Query: 1041 CKLGCEQKLPG---FIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK--KVK 1095
K +L F + W L G ++ V + VK
Sbjct: 1207 LKEARRVRLERWGVFGSCRCVVRRFWA----PRVGGLGGRLVLGEGEEVVVDEDECEAVK 1262
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLI-------FLDRIGIKVDFVNVPYQRQFQVHAERL 1148
KT++D+VEAL+GA L T G ++ L+ I F ++ + Q AE
Sbjct: 1263 EKTLSDMVEALLGAALLTAGPDLALLVCRVFNLLPASITTLASFNDLLLTLKQQAIAENW 1322
Query: 1149 ------VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
+ HL+SL ++++R P L +EA TH S + +P YQRLEFLGDA LD+ I
Sbjct: 1323 QSRISRSGLDHLQSLFDHTYRYPHLGLEAFTHPSLLASVLP-SYQRLEFLGDAWLDFCIV 1381
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFE 1262
++ + SPG +T + +N V+ GLH + S L I +
Sbjct: 1382 RMIFAEGEERSPGEMTAHKGVLASNGALGALGVRLGLHAFVASDSAVLGDSIARYAAALG 1441
Query: 1263 KLSLGSTFGWESVTS---FPKALGDIIESLAGAIFVDSGCNREVVFQSIR----PLLEPM 1315
+ + W + PKA+ D++E+ +I VDSG + VV + P E
Sbjct: 1442 SVDEKGQY-WTRLARGVVVPKAVADVVEASFASIVVDSGFDARVVQRVFELMCVPFYERF 1500
Query: 1316 ITPETMRFHPVRELTEYC 1333
+ ++ VR + E+
Sbjct: 1501 CRYDALQVSEVRRVLEFA 1518
Score = 47.8 bits (112), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 161/382 (42%), Gaps = 57/382 (14%)
Query: 927 LCRII-MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML----LDHCMQNVTIPTIKV 981
+CR+ + P S++T SF ++ L+ +A N ++ + LDH +Q++ T +
Sbjct: 1289 VCRVFNLLPASITTLASFN---DLLLTLKQQAIAENWQSRISRSGLDH-LQSLFDHTYRY 1344
Query: 982 ----LEAITTKKCQEDF--HLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERII 1035
LEA T + LE LGD++L + + +F + G ++ K +
Sbjct: 1345 PHLGLEAFTHPSLLASVLPSYQRLEFLGDAWLDFCIVRMIFAEGEERSPGEMTAHKGVLA 1404
Query: 1036 SNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVT-GRKKV 1094
SN AL LG L F+ ++S + GD+ Y S+ + + R V
Sbjct: 1405 SNGALGALGVRLGLHAFVASDS------AVLGDSIARYAAALGSVDEKGQYWTRLARGVV 1458
Query: 1095 KSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-DFVNVPYQRQFQVHAERLVNVRH 1153
K VADVVEA + + G F R+ +V + + VP+ +F + + V
Sbjct: 1459 VPKAVADVVEASFASIVVDSG------FDARVVQRVFELMCVPFYERFCRYDA--LQVSE 1510
Query: 1154 LESLLNYSFRDPSLLVEALTHG--------SYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
+ +L ++F + + A+TH + L +IP E + +A+ L V+
Sbjct: 1511 VRRVLEFAF---ATVRRAVTHALPVNMVRVTSNLLDIPTIDGDEERIVEAL---LTQVHA 1564
Query: 1206 YNKYPGLSPGYLTDM-RSASVNNDCYALSSVKHGLHKHIL----HASHELYKRINI--TV 1258
+ +T + RSA+ A++ L + +L HA H+ + + TV
Sbjct: 1565 ELRIADTVVARITVLPRSAAHLERAVAIARQIDTLQQPLLHPIDHAEHDAQEAGGVTGTV 1624
Query: 1259 DSFEKL-----SLGSTFGWESV 1275
D ++L L T GW+ V
Sbjct: 1625 DKLDELQHLTSQLARTLGWKRV 1646
>gi|225460893|ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
Length = 364
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 15/252 (5%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
+V +E ++NY FR+ LL EALTH SY YQRLEF+GDA L ++ Y++
Sbjct: 30 ASVEAVERIINYKFRNKKLLEEALTHSSYT---DSASYQRLEFIGDAALGCALSNYVFLA 86
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP L PG L+ +R+A+++ + A +V+ GL++++ H + L ++ + ++ G
Sbjct: 87 YPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQE--EGD 144
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPV 1326
+ + PK L DI+ES+A AI+VD + +V++ R LLEP++T E ++ PV
Sbjct: 145 SVLYGGSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPV 204
Query: 1327 RELTEYCQKN--HFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKE 1384
L E CQK+ H +K R K +V V G F + +K+ AK A KE
Sbjct: 205 TLLYELCQKDGKHVDIKH---WRKGSKNIASVYV---GGKFIASGSSDEKEIAKLNAAKE 258
Query: 1385 VLKSLRASFPGT 1396
L+ L + T
Sbjct: 259 ALQKLSSKLKDT 270
>gi|407917735|gb|EKG11039.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1216
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 32/296 (10%)
Query: 368 LTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
L+ K+ LI+ LL E+R E I+FVE+ T + +LS H + + G
Sbjct: 86 LSPKMQYLIDLLLAEWR--EGFTGIVFVEQRATVAAMDHVLSN----HPQLRDLFNIGTF 139
Query: 427 SGIQCQSRKK-------------QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
G R+K Q + ++EFR G N+IVATS+LEEG+DV +C++VI F
Sbjct: 140 VGTSVTVRRKSHLGIGDLVEVRHQQQTLDEFRDGKKNLIVATSVLEEGIDVSNCHIVICF 199
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH-ASLP 532
+P + + SFIQ RGRAR Q+S +++M+ S DS+ + +L +M+K L+ +
Sbjct: 200 EPPKNLKSFIQRRGRARKQDSKFVIML-SDDSSLAQSPDKWLDLEEQMKKAYLNDLRQIQ 258
Query: 533 CSPLNNHMY--GEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI---NK 587
+ + G+ Y ESTG + TL +++ +Y +C+ L + P+F
Sbjct: 259 AAEAREQIEEGGDAIYRCESTGALLTLENAMQHLYHFCAILGGGQHVDLRPRFSFMVDEN 318
Query: 588 EMGICTLYLPN--NCPIQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
++ + LP N ++ +G T + A A +A LH+ G + DNLLP
Sbjct: 319 DLTTAVVTLPTSVNAKLRQHRGKGAWLTERAARRDAAFQAYVALHKAGLVNDNLLP 374
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 26/315 (8%)
Query: 902 QNYLSKCRQQKQKEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVN 961
+++L R Q + LP + I +P S + F +F +PSI+HR + ++
Sbjct: 594 RDFLHYIRDVSQHRMYSKEYILPAKDFVIDGSPASYAKFAAF--IPSIIHRYELFMIVQE 651
Query: 962 LKNMLL-DHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQ 1020
L N + D +N + VL AIT E+ + + LE LGD LK+ + QL
Sbjct: 652 LCNTAIKDVDFENYEM----VLRAITASSTNENDY-QRLEFLGDCILKFNTAVQLMAGNL 706
Query: 1021 NNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL 1080
+ E L+ KK+R++SN +L K L FI T +F W +ND +
Sbjct: 707 HWPESYLTEKKDRVVSNGSLAKASRRAGLDRFIITRAFTGAKW-------RPRYVND--V 757
Query: 1081 FNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQ 1140
I + ++ + SKT+ADVVE+LIGA GG + + + K+ + + R
Sbjct: 758 LALAAIELPEKRDLSSKTLADVVESLIGAAYIEGGMPKANLCIATLLPKLSWCPLDESRH 817
Query: 1141 FQV-HAER------LVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEF 1191
HA +++ E L+ Y+F++ LL+EALTH S+ YQRLEF
Sbjct: 818 ILAKHAAEDHISAPPIHLERAEELIGYTFKNKYLLLEALTHPSFTSYRDATTSSYQRLEF 877
Query: 1192 LGDAVLDYLITVYLY 1206
LGDAVLDYLI+ L+
Sbjct: 878 LGDAVLDYLISRRLH 892
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
YQRLEFLGD +L + V L YLT+ + V+N A +S + GL + I+
Sbjct: 682 YQRLEFLGDCILKFNTAVQLMAGNLHWPESYLTEKKDRVVSNGSLAKASRRAGLDRFIIT 741
Query: 1246 ASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
+ K V+ L+L + E K L D++ESL GA +++ G
Sbjct: 742 RAFTGAKWRPRYVNDV--LALAAIELPEKRDLSSKTLADVVESLIGAAYIEGG 792
>gi|393215463|gb|EJD00954.1| ribonuclease III [Fomitiporia mediterranea MF3/22]
Length = 1411
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV-------DFVNVPYQRQFQVHAE-RL 1148
K VADV EA+IGA TGG + L + + V DF +V A R
Sbjct: 1052 KAVADVAEAIIGAAYVTGGREIALKVTKALNVPVPHIDRWSDFGRKALAPPPEVTARLRT 1111
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
+++ +E+++ + F P LL +ALTH S E+ Y+RLEF+GDA+LD+L+ ++Y++
Sbjct: 1112 GSIQAVEAIIGHQFNHPHLLAQALTHASIHGNEM-TSYERLEFIGDAILDFLVIRHIYDR 1170
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
LSPG LT ++ A V+N A V GLH+H+L S L K I E+ L
Sbjct: 1171 DSSLSPGALTLLKGAMVSNAALAAVCVWSGLHEHLLFESSALEKSIQSYAVELEQRQLAE 1230
Query: 1269 TFG-----------WESVTSFPKALGDIIESLAGAIFVD---SGCNREVVFQSI-RPLLE 1313
W V PKAL D++ES+ GA++V S E F + P +
Sbjct: 1231 HEQAAREDRQPGQYWVDVEP-PKALSDVVESIFGAVYVSDNFSPIGAEKFFDKVLAPFYD 1289
Query: 1314 PMITPETMRFHPVRELTEYCQ 1334
IT T+ HP + L E Q
Sbjct: 1290 QHITLHTLSHHPTKILFELFQ 1310
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PELC + + I S + + + +PSI+ +L+ LL L DH +I +L A
Sbjct: 803 PELC--VKSTIPASVYRTISLLPSIISKLEDFLLIKELNAKYFDH-----SIAEYDLLAA 855
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
+++ D E LE LGD++LKY +S LF T+ HEG L V ++RIISN +L +
Sbjct: 856 VSSPAAFVDVDYERLELLGDAYLKYLSSVYLFVTFPTLHEGALHVSRQRIISNRSLLRNA 915
Query: 1045 CEQKLPGFIRTESFDPKMWIIP 1066
LP +I+++ P+MW P
Sbjct: 916 NRCGLPQYIQSKPLAPRMWCPP 937
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 220/529 (41%), Gaps = 100/529 (18%)
Query: 159 HQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIH--DLETLMNSK 216
H +M +F+H T + PRIFG S V S + ++ I LE ++++K
Sbjct: 9 HPIQLLMKDFFH---VTDKKSRPRIFG-------SIVVSPDATFYFDISLLKLENVLDAK 58
Query: 217 VY---TCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDL 273
+ +S+LS +P + + YD H + T L L+ L +
Sbjct: 59 YHGFTDATRDSILS--LPDKPMELVVF-YDPQVHIVDTPL--------------LKRLLV 101
Query: 274 NEAQAELIRKKVSKINSTLLYCLSELG------VWL-ALKAAETIS-CYESDFFAWEQLD 325
++ L R NS + LSE+G VW ALK E S E F ++L
Sbjct: 102 HDPHMSLFRSHFR--NSK--HALSEIGACACDLVWRRALKDMEAESDINEPVFEEDDELQ 157
Query: 326 GFGETIIKKFGSDASQALVTY---VPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESL--L 380
E I+ S + + +P+ + S G FN+ T K L+E L
Sbjct: 158 TGSEAAIRSAKSKIRNTIKNWLFTMPNLDQSSRG----FNI-----TPKFARLMEVLKAC 208
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
E +G + R IIFV++ A VL LL L + + + + G+ Q+++
Sbjct: 209 EPQG-DAFRGIIFVQKRSIAYVLADLLRTLDDQIGFIRPQALVGH---------VLQSDV 258
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
++ FR G+ N+++AT E+ L++ S +VI FD + S+ R RAR Q + M
Sbjct: 259 LDAFRTGVYNLLIATKFAED-LEICSATIVIRFDLFESQVSYAHCRARARGQQCHLIHMA 317
Query: 501 KSGDSTTQSRLENYLASGNKMRKEVLS-----HASLPCSPLNNHM-------------YG 542
+ G + L + +M + V +++P PL +
Sbjct: 318 ERGSDVHRRILADVARIDRRMERWVQRVTTSVGSAIPPVPLRETVDPYRSDSDDEDNDDP 377
Query: 543 EDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYF-----KPTPKFH------INKEMGI 591
E F +T + +++++Y + S+LP+ G KP ++ +K M I
Sbjct: 378 ESFVQDPTTSGRIFVQDAMTVVYRFASQLPAAGDVERRLNKPLFEYEELQDGPSSKTMYI 437
Query: 592 CTLYLPNNCPIQTVIAQGNI--KTLKQAACLEACKKLHQIGALTDNLLP 638
CT+ LP P++ V + ++ AC + C +L+ +GAL L P
Sbjct: 438 CTVLLPPGAPLRRVSGSPSPSRSQARRMACYQTCYELYSLGALDYRLFP 486
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
Y+RLE LGDA L YL +VYL+ +P L G L R ++N ++ + GL ++I
Sbjct: 867 YERLELLGDAYLKYLSSVYLFVTFPTLHEGALHVSRQRIISNRSLLRNANRCGLPQYI 924
>gi|443728415|gb|ELU14771.1| hypothetical protein CAPTEDRAFT_209996 [Capitella teleta]
Length = 985
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 247/531 (46%), Gaps = 71/531 (13%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R+YQLE + +N+++ TG GKT +A +++ + +++ P+ V +FLVP V LV
Sbjct: 293 RSYQLELVNGVGDVKNSLIVAPTGCGKTFVAAEIIKQH--MVKNPNSKV-IFLVPTVALV 349
Query: 82 PQQAEAIKMHT--DLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ + ++ ++ D ++ G+ G K + +H ++VMTPQIL++ +
Sbjct: 350 QQQHDVLQSYSIPDARIKPISGE-GSQI---NPLKNLIQRHNIMVMTPQILVNACDHASL 405
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
I +LI DECHH+ +H Y+ IM YH L PRI GMTAS K + +E
Sbjct: 406 LSFGIGLLIFDECHHSMKEHPYSKIMA-LYHDLKPLEGKMPPRIVGMTASVGVGK-AKNE 463
Query: 200 QDYWQKIHDLETLMNS---KVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
D + I L M++ V C + P + K + P + H
Sbjct: 464 DDAIKHIIRLLANMDAHLVSVVDCKEDLAFCVNKPQENLVY-LKKRNSDPFYVCIH---- 518
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKI---NSTLLYCLSELGVWLALKAAETISC 313
M+ +++ N DL +AQA L +++ K +LLY W + A I
Sbjct: 519 EIMVTIENRIENYNKDLTKAQARLGKQEQIKPPAEKGSLLY-----KQWHSAFAKRLIVN 573
Query: 314 YESDFFAW------EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSI--------GDDS 359
E++ F + E L + + ++ + AL Y+ + + D
Sbjct: 574 VENESFHFDLVCCAEYLKIYNDALLINSDCRSLDAL-EYLKEKVKHLLEMRNRNRDQDSD 632
Query: 360 KFNLD---SGLLTEKIVCL-------------IESLLEY-----RGVEDIRCIIFVE--R 396
+ ++ + L T+K+ L +E+L +Y R E +RC++F +
Sbjct: 633 RIHIKQWLAKLYTDKVEDLERFCDDPNNANPKLETLKKYILKKKREEEPMRCMVFCQTRE 692
Query: 397 VITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVA 454
+ +++V + ++ L + ++ G+N+ + + +QN++++ F G +I A
Sbjct: 693 ICSSLVRWANSTDGL---VDLRATFLTGSNAAADKKGLTSSQQNDVIKSFANGRHQLIFA 749
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
T++ EEGLD+Q+C+ VI + ++ + IQSRGRAR + + L+ S ++
Sbjct: 750 TTVAEEGLDIQACDNVIRYQYVTSMTARIQSRGRARKSEASFTLLATSKEA 800
>gi|242076430|ref|XP_002448151.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
gi|241939334|gb|EES12479.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
Length = 194
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 23/174 (13%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
D AR YQL+ + A+++N +V+L TG GKT IA++L+ +L+RKPS V +FL P
Sbjct: 22 DPRRIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLMYELGHLIRKPSREVCIFLAP 81
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
+ LV Q V +Y+G G + D W++E+ ++EVLVMTPQILL LR
Sbjct: 82 TIPLVRQ------------VQRYYGS-GKNSRDHQAWEKEIGEYEVLVMTPQILLHNLRH 128
Query: 137 SYFKLNMIKVLILDECHHARG--KHQYACIM-----TEF---YHRLLETGDSNL 180
+ K++ I +LI DECHHA+ +H YA IM +F Y+ LL++ + N+
Sbjct: 129 CFIKMDSIALLIFDECHHAQAQKRHPYAQIMKVTARVQFRCLYYHLLQSLEINI 182
>gi|302412697|ref|XP_003004181.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356757|gb|EEY19185.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 1240
Score = 119 bits (299), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 206/483 (42%), Gaps = 122/483 (25%)
Query: 928 CRIIMAP------ISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKV 981
R+ AP I L Y +PSI H ++ L+A L + LL N + P++ V
Sbjct: 726 ARVYPAPWAKIDTIPLDHAYFGALIPSISHIVEVRLVAEQLSSSLLRDL--NFSDPSL-V 782
Query: 982 LEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALC 1041
L AI+TK E + E LE LGDS LK + + ++SN+ LC
Sbjct: 783 LTAISTKGSLEATNYERLEFLGDSILKLCTTVNAAALHG-------------LVSNSRLC 829
Query: 1042 KLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYV----------TGR 1091
+ + L F+ TE+F + W R IYV +G
Sbjct: 830 RAALDAGLDKFVLTENFTCRTW--------------------RPIYVNGMLETGARDSGP 869
Query: 1092 KKVKSKTVADVVEALIGAFLSTGG--ENVGLI--FLDRIGIKVDFVNVPYQRQFQVHAER 1147
+++ +KT+ADVVEALIGA GG + +G I FL + K+ +P ++ +H+
Sbjct: 870 REISTKTLADVVEALIGAAYIDGGLAKAIGCISIFLRELEWKL----LPACQEI-LHSLA 924
Query: 1148 LVNVR------HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLI 1201
+V LE L++Y+F LL+E++TH S+ + C +RLEFLGDA+LD ++
Sbjct: 925 PPDVSLPPMLVPLEELIDYTFTKKILLIESITHASFTAGHVNGCLERLEFLGDAILDDIV 984
Query: 1202 TVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSV-------------------------- 1235
+L+ LS + +++ASVN D ++
Sbjct: 985 VSHLFPL--NLSHDRMHLLKTASVNGDLLGFLALESHAEEDEVIIDVNFSPSDTDLNPQN 1042
Query: 1236 -------------KHGLHKHILHASHELYKR--------INITVDSFEKLSLGSTFGWES 1274
K L K + H+S E+ ++ ++ L GS++ W
Sbjct: 1043 PAGMEQKLKRTRRKIPLWKFMRHSSIEVVQQQTKAAGAHADLRGQIIHALGHGSSYPWSL 1102
Query: 1275 VTSF--PKALGDIIESLAGAIFVDSG----CNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+ K L D++E++ GA++VDSG C R I P+L + + HP E
Sbjct: 1103 LARLHPAKFLSDMVEAVLGAVWVDSGDMRACVRVTERLGILPVLSRLAKDDVHVLHPKSE 1162
Query: 1329 LTE 1331
L E
Sbjct: 1163 LGE 1165
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/518 (21%), Positives = 226/518 (43%), Gaps = 68/518 (13%)
Query: 164 IMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASE 223
IM FYH ++ +P + G+TASPI ++ LE L + C +
Sbjct: 2 IMMNFYHPRKQSA-LWVPHVLGLTASPIMRS----------RLEGLEALERTLDSVCVTP 50
Query: 224 SV----LSNFIPFSTAKFKFY-----KYDEIPHALYTHLADELAMIELKHTRSLENLDLN 274
+ L + T + Y K P ++ + L + ++++ + L L
Sbjct: 51 RLHRDDLMTHVKRPTVSYVHYETTDAKGGPTPVSILS-LREACRNMDIRQDPFI--LHLR 107
Query: 275 EAQAELIRKKVSKI-NSTLLYCLSELGVWL--ALKAAETISCYESDFFAWEQLDGF---- 327
+ + R+++ K+ S Y ++ + +L+ + + ++++ W+ + F
Sbjct: 108 DKGTDRARRELIKVLTSHETYSQQQMKSFFNQSLRVLRDLGPWAAEYYIWKVISDFLAIT 167
Query: 328 --GETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGV 385
+ + ++ ++ Q L + + SI + L + + K + LIE + +
Sbjct: 168 EASDHRMNQWKTEEKQYLANIL---RQISISEPQVSMLSTHNTSNKFMMLIEHM-SSKAT 223
Query: 386 EDIRCIIFV-ERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKK-------- 436
+ IIFV ER A++ + S L + + G ++ + RKK
Sbjct: 224 DGTAGIIFVKERSTAAMLAHVIESHPLTPNMYSSVGVVVGTSNHL---VRKKDMWDLSRA 280
Query: 437 --QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNS 494
+ E + +FR G +N+++ATS+LEEG+DV +CNLVI FD + +F+Q RGRAR ++S
Sbjct: 281 AHETEPLLQFRSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRGRARKKDS 340
Query: 495 DYLLMVKSGDSTTQS--RLENYLASG-NKMRKEVLSHASLPCSPLNNHMYGEDFYHVEST 551
++++ Q +E + + K R+E+ + S + Y E Y VEST
Sbjct: 341 SLVVLLPGTGHVPQDWESMEATMRTHYEKERREIRIMEQIEAS--ESTEYEE--YIVEST 396
Query: 552 GTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF---HINKEMGI---CTLYLPNNCP--IQ 603
++ + + +C +L + P++ ++ E T+ LP+ P ++
Sbjct: 397 NARLDFENAKAHLSHFCGQLSPGEFIDKRPEYIPRVVDDEEPPSLRVTVLLPSYIPAAVR 456
Query: 604 TVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
++ + K+ QA A +A L+ G + +++LP
Sbjct: 457 HAESRRSWKSEHQASKDAAFQAYLALYDAGLVNEHMLP 494
>gi|295413446|gb|ACT68336.2| interferon-induced helicase C domain-containing protein 1
[Ctenopharyngodon idella]
gi|379048247|gb|AFC88291.1| MDA5 [Ctenopharyngodon idella]
Length = 961
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 147/574 (25%), Positives = 258/574 (44%), Gaps = 94/574 (16%)
Query: 23 RNYQLEALENALKQ-NTIVFLETGSGKTLIAIMLLRSYAYLLRKPS---PFVAVFLVPKV 78
R+YQ+E AL++ N I+ L TGSGKT +A+ + + + L RK P V LV KV
Sbjct: 286 RDYQMEVARPALEEKNIIICLPTGSGKTRVAVYITKEH--LERKKQMGQPGKVVVLVNKV 343
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDM-GVDFWDGATW-----KEEMSKHEVLVMTPQILL- 131
LV Q H + G++ V+ GA+ + + ++++++ T QIL
Sbjct: 344 PLVEQ-------HYKAEFGRFLKHQYSVERVSGASQLKISLPQIIEQNDIIICTAQILEN 396
Query: 132 ----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-----HRLLETG 176
DG++LS F L +++DECHH + Y IM + ++LL+
Sbjct: 397 SFAKAKNGDEDGIKLSQFTL-----MVIDECHHTKKGDVYNHIMIRYLRQKHKNQLLKKQ 451
Query: 177 DSN---LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN--FIP 231
D + +P+I G+TASP V + + H L+ N +T +++ P
Sbjct: 452 DKSPVPIPQILGLTASP---GVGGAMSQQMAEQHILQICANLDAFTIKTKTFEEEEAKTP 508
Query: 232 FS-TAKFKFYKYD-------EIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRK 283
+ A+ + K D +I ++TH A L + E T++ E + + Q
Sbjct: 509 YKRIARAEERKEDPFGDVIKKIMDEIHTH-AGLLPLCE-PGTQNYEQWAVQKEQ-----N 561
Query: 284 KVSKINSTLLYCLSELGVW-LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQA 342
+ N + C L + AL + TI SD F + LD + +K S +
Sbjct: 562 AAKEENQKVRVCAEHLRHYNEALHQSNTIRM--SDAFRF--LDKYHNEELKTKSSPDDEG 617
Query: 343 LVTYVPSGA-EWSIGDDSKFNL----------DSGLLTEKIVCLIESLLEYRGVEDIRCI 391
+T + +++ D K L ++ L K + L E+ E R I
Sbjct: 618 TITITDTERFLFTLFKDKKAKLQELMGKPEYENNNLAQLKTIIL----KEFSTREVARGI 673
Query: 392 IFVERVITAIVLQSLLSELLPR--HCTWKTKYI--AGNNSGIQCQSRKKQNEIVEEFRRG 447
IF ++AI L + E P+ Y+ G+ S ++ + +Q ++++ FR+G
Sbjct: 674 IFTRTRLSAIALCQWIQEN-PKFEEVGVSASYLIGGGDQSVVKPMTAAEQKDVLQRFRKG 732
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
+N+++AT++ EEGLD+ CN+VI + + IQ+RGR R ++S Y L+ ++G
Sbjct: 733 EINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGRGRAEDSSYTLVAEAGSGVA 792
Query: 508 QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
+ S N+ R++++S A + +N Y
Sbjct: 793 ERE------SVNEYREKMMSKAIIKVCKMNRADY 820
>gi|409042283|gb|EKM51767.1| hypothetical protein PHACADRAFT_150441 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1556
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E L+ +L++N ++ L+TGSGKT IA++ ++ + + S V+ FL P V L+
Sbjct: 17 RGYQQELLDESLRRNIVIALDTGSGKTHIAMLRMK---HEVEHTSNKVSWFLAPTVALIE 73
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ + I + VG G D W D W +S+H ++V TPQILLD LR Y L
Sbjct: 74 QQRDVIAAAIPVSVGLISGASAPDQWKDADLWLNILSQHRIVVSTPQILLDALRHGYINL 133
Query: 142 NM-IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-----PRIFGMTASPIKS 193
I +L+ DE HHA KH Y IM FYH L ++ P I G+TASPI S
Sbjct: 134 GKHISLLVFDEAHHAMSKHPYNEIMRGFYHPLPPRHGCDIQAIVRPAILGLTASPIYS 191
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 209/504 (41%), Gaps = 115/504 (22%)
Query: 945 FVPSIMHRLQSLLLAVN-LKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLG 1003
+PS++ R S+ V+ ++ L + +IP + A+T + + LETLG
Sbjct: 976 LLPSLL-RFASISATVHAVRITLFASSPRLASIPFTLLRPALTAPVATDLVSYQRLETLG 1034
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D+ LKY S L Y HEG L+ +K+ ++N L K L +I + F K W
Sbjct: 1035 DTVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWIIRDRFAAKKW 1094
Query: 1064 ---------------------------IIPGDN-SGSYELNDDSLFNGRKIYVTGRKKVK 1095
I GD+ +G + + + N +K G K
Sbjct: 1095 RPRYIGDAASAPASPVAENKNEGAAADIGKGDDPAGDDNVEAEDVGNAKKAG-EGNDKEN 1153
Query: 1096 SKTVA----------------------------------DVVEALIGAFLSTGGENVGLI 1121
K VA DVVE+LIGA GG ++
Sbjct: 1154 GKEVAQGETTNGNKAADADKKKKKKKKAKTQELSTKMLADVVESLIGAAYEHGGFDLATE 1213
Query: 1122 FLDRIGIKVD-FVNVPYQRQFQV-HAERLVN----VRHLESLLNYSFRDPSLLVEALTHG 1175
+ + +D + VP + + H E L + +E ++ Y F LLVEALTH
Sbjct: 1214 CMQLFHLGIDTWETVPACVEKSLGHIEELGELPPALELVERMVGYKFSKRVLLVEALTHA 1273
Query: 1176 SYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG--LSPGYLTDMRSASVNNDCYALS 1233
SY + Y+RLEF+GDAVLD ++T +LY+ PG +PG++ + A VN+ A +
Sbjct: 1274 SYTGVIETQSYERLEFIGDAVLDMIVTDFLYH-VPGKNYTPGHMHLRKEALVNSHLLAFA 1332
Query: 1234 ---------------SVKHG-----------LHKHILHASHELYKRINITVDSFEKLSLG 1267
+ + G L + +LH+S + +N+T +EK G
Sbjct: 1333 CMNTHVDVDASMPAWNAQDGIVLDTATQRIPLCRCLLHSSPRVLDDLNLTYARWEKHGAG 1392
Query: 1268 --------STFGWESVTSF--PKALGDIIESLAGAIFVDS----GCNREVVFQ-SIRPLL 1312
+ W ++TS PK + D+ ES+ GAIF+DS G R V+ + I ++
Sbjct: 1393 IRRALEHDVIYPWAALTSLQAPKFVSDMFESVLGAIFLDSHGDLGTVRAVLAKLGIVHIM 1452
Query: 1313 EPMITPETMRFHPVRELTEYCQKN 1336
E ++ E HPV L + KN
Sbjct: 1453 ERIVADEVDVLHPVSRLGIWAAKN 1476
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQS---------RKK 436
E IIFV R + L ++S L ++ + G ++ + + ++
Sbjct: 402 EPFSGIIFVTRRDAVLALARVISSLPEMTADFQIGCLLGTSASFKRHAFLDISRSLLKET 461
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
+++++FR G N++V+T++ EEG+D+Q+C VI FDP + S+ QSRGRAR + S +
Sbjct: 462 ATQVLKDFRTGDKNLVVSTAVAEEGIDIQACGTVIRFDPPDNMVSWAQSRGRARRRRSTF 521
Query: 497 LLMVKSGDSTTQSRLENYLASGNKMRKEVL---SHASLPCSPLNNHMYGEDF-YHVESTG 552
L+M+ S DS ++ +A +M K ++ + + P ED + V TG
Sbjct: 522 LVMLGS-DSASEK-----IALWQEMEKTMIKLYTDTTRGNDPPPETELEEDLEFVVPHTG 575
Query: 553 TIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN 586
TL SS+S +Y +C+ LP + P F ++
Sbjct: 576 AKLTLESSISHLYHFCAILPHSSHTVQGPIFELD 609
>gi|326670834|ref|XP_694124.3| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Danio rerio]
Length = 1035
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 254/572 (44%), Gaps = 90/572 (15%)
Query: 23 RNYQLEALENALKQ-NTIVFLETGSGKTLIAIMLLRSY-AYLLRKPSPFVAVFLVPKVVL 80
R+YQ+E AL++ N IV L TGSGKT +A+ + + + R V LV KV L
Sbjct: 298 RDYQMEVARPALEEKNIIVCLPTGSGKTRVAVFITKEHLERKQRMGQKGKVVVLVNKVPL 357
Query: 81 VPQQAEAIKMHTDLKVGKYWG-DMGVDFWDGAT-----WKEEMSKHEVLVMTPQILL--- 131
V Q H + G++ V+ GA+ + + + K+++++ T QIL
Sbjct: 358 VEQ-------HYKAEFGRFLKHQYSVERVSGASQLKISFPQIIEKNDIIICTAQILENSL 410
Query: 132 --------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-----HRLLETGDS 178
DG+ LS F L +++DECHH + Y IM + ++LL+ D
Sbjct: 411 AKAKNGDEDGIELSQFTL-----MVIDECHHTKKGGVYNHIMIRYLKQKNRNQLLKKQDK 465
Query: 179 NL---PRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN--FIPFS 233
L P+I G+TASP V + + H L+ N +T +++ PF
Sbjct: 466 TLVPIPQILGLTASP---GVGGAVSQQMAEEHILQICANLDAFTIKTKTFEEEEAKTPFK 522
Query: 234 -TAKFKFYKYD-------EIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKV 285
AK + K D +I ++TH AD + E T++ E + + Q
Sbjct: 523 RIAKAEERKEDPFGDVIKKIMDEIHTH-ADLQPLCE-PGTQNYEQWVVQKEQ-----NAA 575
Query: 286 SKINSTLLYCLSELGVW-LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALV 344
+ N + C L + AL + TI SD F + LD + +K S + +
Sbjct: 576 KEENQNVRVCAEHLRQYNEALHQSNTIRM--SDAFRF--LDKYHNEELKTKSSPDEEGNI 631
Query: 345 TYVPSGA-EWSIGDDSKFNL----------DSGLLTEKIVCLIESLLEYRGVEDIRCIIF 393
T + +++ D K L ++ L K + L E+ E R IIF
Sbjct: 632 TITDTERFLFTLFKDKKAKLQELMGKPQYENNNLAQLKTIIL----KEFSTREKARGIIF 687
Query: 394 VERVITAIVLQSLLSELLPR--HCTWKTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLV 449
+ ++AI L + E P+ + Y+ G+ S ++ + +Q ++++ FR G +
Sbjct: 688 TQTRLSAIALCQWIEEN-PKFDEVGVRASYLIGGGDQSVVKPMTAAEQKDVLKRFRTGEI 746
Query: 450 NVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS 509
N+++AT++ EEGLD+ CN+VI + + IQ+RGR R ++S Y L+ ++G +
Sbjct: 747 NLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGRGRAEDSSYTLVAEAGSGVAER 806
Query: 510 RLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
S N+ R++++S A +N Y
Sbjct: 807 E------SVNEYREKMMSKAIAKVCKMNRADY 832
>gi|255577153|ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
gi|223531076|gb|EEF32926.1| ribonuclease III, putative [Ricinus communis]
Length = 342
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 16/193 (8%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
++ +E +LNY+F++ L+ EALTH SY P YQRLEF+GDA L ++ +++ Y
Sbjct: 6 SISAVEKILNYTFKNKQLVEEALTHSSYTAS--PN-YQRLEFIGDAALGLALSNHVFLAY 62
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF-----EKL 1264
P L PG+L+ +R+A+++ + A +VKHGL + + H + L ++ D+ E +
Sbjct: 63 PDLDPGHLSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFSDAVLREEDEAV 122
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF- 1323
+ G T PK L DI+ES+A A++VD + + ++ R LLEP++TPE ++
Sbjct: 123 AHGGT------VKAPKVLADIVESVAAAVYVDVNFDLQRLWVIFRGLLEPIVTPEDLQQQ 176
Query: 1324 -HPVRELTEYCQK 1335
P+ L E CQK
Sbjct: 177 PQPMTMLFELCQK 189
>gi|389747383|gb|EIM88562.1| hypothetical protein STEHIDRAFT_155914 [Stereum hirsutum FP-91666
SS1]
Length = 1722
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 147/317 (46%), Gaps = 46/317 (14%)
Query: 1050 PGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVK---------SKTVA 1100
P R S D PG EL GR++ +K+++ KTVA
Sbjct: 1279 PALARDLSMD-----APGSKQSGSEL-------GREVPGAKQKRLQEEQGIHWLGDKTVA 1326
Query: 1101 DVVEALIGAFLSTGGENVGL-------IFLDRIGIKVDFVNVPYQRQFQVHAE-RLVNVR 1152
DV EA++GA TGG L I + R+ DF V A R ++
Sbjct: 1327 DVAEAIVGAAYVTGGREAALKASKALCIAVPRVDRWSDFGRKALAPPPDVTARLRAGSIE 1386
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+E++L + F P LL +ALTHGS EI Y+RLEF+GDA+LD+++ ++Y++ L
Sbjct: 1387 AVEAILGHKFERPHLLAQALTHGSIQGYEI-TSYERLEFIGDAILDFMVIRHVYDRDTKL 1445
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF-----EKLSLG 1267
SPG +T ++ A V+N A + GL ++++ + L I E+ +L
Sbjct: 1446 SPGAMTLLKGAMVSNSALAAVCIWAGLDEYLMFEAPVLAHNIRAYAQKLREKQKEEYALA 1505
Query: 1268 STFG------WESVTSFPKALGDIIESLAGAIFVD---SGCNREVVFQSI-RPLLEPMIT 1317
G W T PKAL D++ES+ GA ++ S E VF I +P + IT
Sbjct: 1506 QQEGRSPGQYWLE-TEPPKALSDVVESIIGATYISDNFSPVGVEKVFDKILKPFYDKHIT 1564
Query: 1318 PETMRFHPVRELTEYCQ 1334
+T+ HP + L E Q
Sbjct: 1565 LQTLSHHPTKILFELFQ 1581
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 890 EPLLNGRRIFHVQNYLSKCRQQKQKEPSKISFE-LPPELCRIIMAPISLSTFYSFTFVPS 948
+PL+ R+ V N L+ +Q P+K + L PELC I+ STF + +PS
Sbjct: 1015 QPLIEVGRVGVVMNVLNPVTKQSTP-PTKPDVKYLIPELCCKFT--IAASTFRTALLLPS 1071
Query: 949 IMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLK 1008
I R++ LLL L DH +I + AI+ +F E LE LGD++LK
Sbjct: 1072 ITRRIEDLLLVKELNASFFDH-----SISEYHLHAAISAPSASVEFDYERLELLGDAYLK 1126
Query: 1009 YAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIP 1066
Y +S LF T + HEG L + RIISN AL LP F++ ++F K W P
Sbjct: 1127 YLSSIYLFVTNPSQHEGALHSARLRIISNKALLHNADAAGLPPFVQAKTFVAKFWQPP 1184
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 142/628 (22%), Positives = 239/628 (38%), Gaps = 95/628 (15%)
Query: 70 VAVFLVPKVVLVPQQ---AEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
+A+FLV L Q A ++ T+L++ Y D TW++ ++ +VLV++
Sbjct: 184 IALFLVEGESLETQPHVYARSLAASTNLRIESYSSSGDEDTQASNTWQDALTL-DVLVLS 242
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGK--HQYACIMTEFYHRLLETGDSNL-PRI 183
P LL+ LR L + + L + + H +M EFY + NL PRI
Sbjct: 243 PMHLLELLRTGIVDLAQLHTIYLRDARPIKDNDLHPMNRVMAEFYM----PAEENLRPRI 298
Query: 184 FGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI---PFSTAKFKFY 240
+ + ++ LE ++ SKV C + +I P + +
Sbjct: 299 VACLPEHLP---------FDARMLKLEQILCSKV--CGVSDDIREYILAMPDRPTELVVF 347
Query: 241 KYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELG 300
Y+ YT L R L N+D E+ ++ S + L E+G
Sbjct: 348 -YERASKYSYTLL-----------YRQLRNIDPEES-------IFPRLFSAARHTLVEVG 388
Query: 301 ------VWL-ALKAAETISCYESDFFAWEQ-LDGFGETIIKKFGSDASQALVTYVPSGAE 352
VW AL E S D ++ L E ++ D + V +P+
Sbjct: 389 PAASDLVWRRALPEIEMTSAVNDDDEEEDEILSPEAEAALRI--RDTIKNWVFAMPNLDP 446
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
S G FN+ L K+V ++ S Y + R I+FV+R A+V+ LL L
Sbjct: 447 SSRG----FNVMPKFL--KLVHVLRSCRAYG--DAFRGIVFVQRRAVALVMVDLLRTLDM 498
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
+ GN +Q ++ EIV+ F G N+++AT E+ +D+ +LV+
Sbjct: 499 GYLRPHALVGHGNYGPLQSET-----EIVQAFGMGTYNLLIATKCGED-IDLPRASLVVR 552
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
+D + S+ SR R R + S + M++ G+ T + L + M A+ P
Sbjct: 553 YDLFESQVSYGYSRARTRGRESHLVHMIQRGNDTHRRMLTHLTQLSRPMHLWAEKVAAGP 612
Query: 533 CSPLNNHMYGE--DFYHVES--------------TGTIATLSSSVSLIY--FYCSRLPSD 574
+ + E D Y +S T L + S+IY +R +
Sbjct: 613 EGAVPPTILHETHDPYLSDSEDEDEPDSYIKDPTTSGRIRLQDATSVIYQVAASARGVTT 672
Query: 575 GYFKPTPKFHINKEMG-------ICTLYLPNNCPIQTVIA--QGNIKTLKQAACLEACKK 625
+ P F + +CT+ LP I+T + ++ AC E C
Sbjct: 673 DAVEYQPLFGFEEVATNSAYPRVVCTVTLPEGPAIRTFRGGPSSSFSQARRTACFETCSG 732
Query: 626 LHQIGALTDNLLPDIVVEKHDAQKRGNE 653
L G L + P ++R +E
Sbjct: 733 LFHAGLLDYHFFPQPPRTSSPYRRRPDE 760
>gi|224116530|ref|XP_002317324.1| predicted protein [Populus trichocarpa]
gi|222860389|gb|EEE97936.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E +LNY F++ L EALTH SY YQR+EFLGDA L ++ Y+Y Y
Sbjct: 4 SVFAVEKILNYKFKNKRHLEEALTHSSYT---DSASYQRMEFLGDAALGLALSNYVYLAY 60
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P L PG+L+ +R+A+++ + A ++KHGL++ + H + L ++ D+
Sbjct: 61 PQLDPGHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDA 120
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVR 1327
+ PK L DI+ES+A A++VD + + + R +LEP++T E ++ PV
Sbjct: 121 LVYGGSIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVT 180
Query: 1328 ELTEYCQKN 1336
L E CQK
Sbjct: 181 MLFERCQKQ 189
>gi|169868762|ref|XP_001840952.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
gi|116498110|gb|EAU81005.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
Length = 2074
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E L+ +L++N I+ L+TGSGKT IA++ ++ + L + + + FL P V L
Sbjct: 36 RAYQQEMLDESLRRNIIIALDTGSGKTHIAVLRIK---HELERENRKICWFLAPTVALCQ 92
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ IK + VG G D W + A WK + H V+V TPQ+ LD LR Y +
Sbjct: 93 QQQSVIKTYIPGPVGLISGAHQPDQWKNAALWKSVLETHRVIVSTPQVFLDALRHGYINM 152
Query: 142 NM-IKVLILDECHHARGKHQYACIMTEFYHRLLETG---DSNL---PRIFGMTASPI 191
+ I +L+ DE HHA KH Y IM +FY +L D++ P + G+TASPI
Sbjct: 153 GLQIGLLVFDEAHHAADKHPYNLIMKDFYFKLPARSPMHDADFPCRPMVLGLTASPI 209
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 143/309 (46%), Gaps = 70/309 (22%)
Query: 1094 VKSKTVADVVEALIGAFLSTGGENVG---LIFLDRIGIK-------VDFVNVPYQRQFQV 1143
+ +K +ADV+E+LIGA +GG +G F D +G+K VD + Q + +
Sbjct: 1669 LSTKVLADVIESLIGAAYISGGFPLGYECAKFFD-LGLKWAPLPTRVDQILSRVQPEDDI 1727
Query: 1144 H-AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
+L +V H+ L Y+F+ LL+EALTH SY Y+R+EF+GD++LD ++T
Sbjct: 1728 PIPPQLADVEHM---LGYTFKRKILLIEALTHASYREHINTISYERMEFIGDSILDMVVT 1784
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNND-----CYAL------------------------- 1232
LY SPG++ RSA VN C +
Sbjct: 1785 DMLYRAPREYSPGHIHLRRSAVVNGHFLAYICLGMWRELEGVMPQPSASSNAGKDDWNPY 1844
Query: 1233 --------SSVKHGLH--KHILHASHELYKRINITVDSFE--------KLSLGSTFGWES 1274
+ H +H + +LH+S ++ + TV+ +E L GS F W S
Sbjct: 1845 LNPPTFEEGTTAHRIHLSQCLLHSSQQVLDDLRNTVERYELRREEIADALEHGSIFPWSS 1904
Query: 1275 VTSF--PKALGDIIESLAGAIFVDSGCNREVVFQSIR-----PLLEPMITPETMRFHPVR 1327
+T PK L DI+ES GA F+DSG + VV IR P+LE +I + HPV
Sbjct: 1905 LTRLQAPKFLSDIVESTIGAAFIDSGFSIPVVTSIIRRIGILPVLERIIRDDVDVLHPVS 1964
Query: 1328 ELTEYCQKN 1336
L+ + +N
Sbjct: 1965 RLSMWAAQN 1973
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 37/258 (14%)
Query: 369 TEKIVCLIESLLEYR----GV-EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
T+K+ L+E LLE + G+ E I+FV+R + L +ELL H K +
Sbjct: 399 TDKVRVLVECLLEEKEEVEGLNESFSGIVFVQRRDAVLAL----AELLKHHPFTKDSFTV 454
Query: 424 GNNSGIQCQS-------------RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
G G + ++ Q+ + FR G+ N+I+ATS+ EEGLD+ +C V
Sbjct: 455 GVLLGTSDSAHRHSLMDVTRHITKQSQDSTLSSFRLGIHNLILATSVAEEGLDIPACGSV 514
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY---------LASGNKM 521
I +DP + S+IQSRGRAR + S + LM + Q+ + + + S N
Sbjct: 515 IRWDPPPNMASWIQSRGRARRKRSTFTLMYDVEEDRAQANVAKWREVEERMVEMYSRNSG 574
Query: 522 RKEVLSHASLPCSPLNNHMYGEDF---YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFK 578
+E A + +DF VESTG T S+VS + +C+ + G +
Sbjct: 575 GRE--GDAGVDVEDWEGEE-PDDFDAVLSVESTGAYLTPHSAVSHLAHFCAVISRSGSNE 631
Query: 579 PTPKFHINKEMGICTLYL 596
P + I+ + L+L
Sbjct: 632 NRPIYDIDPPDYVPGLHL 649
Score = 48.1 bits (113), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 976 IPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERII 1035
IP + A+T E + + LETLGD+ LK+ A Q+F Y HEG L+ +K+ +
Sbjct: 1488 IPLDVLTVALTAPVAGERHNYQRLETLGDTVLKFLAGIQIFAEYPMWHEGYLTKRKDHAV 1547
Query: 1036 SNAALCK 1042
+N L K
Sbjct: 1548 ANVRLAK 1554
Score = 47.0 bits (110), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
YQRLE LGD VL +L + ++ +YP GYLT + +V N A VK G+ + I+
Sbjct: 1508 YQRLETLGDTVLKFLAGIQIFAEYPMWHEGYLTKRKDHAVANVRLAKECVKRGVVRWII 1566
>gi|317033008|ref|XP_001394728.2| hypothetical protein ANI_1_2258094 [Aspergillus niger CBS 513.88]
Length = 889
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 192/436 (44%), Gaps = 75/436 (17%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVT----IPTIKVLEAITTKKCQEDFHLESLE 1000
F PSI H ++ ++A L+ L +++VT I + + T+ + + F L L
Sbjct: 402 FTPSISHEVEVYMIAQILRQEL---SLRSVTPWQRIDLLAIAIRPTSIEHRATFRL--LA 456
Query: 1001 TLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDP 1060
+GD+F+KY + QLF + HEGLLS K+R +S+A L + L F+ ++ +
Sbjct: 457 FIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLNG 516
Query: 1061 KMWIIP---GDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGEN 1117
K W+ P G S E ++ + + T+AD+ +A++GA + GG N
Sbjct: 517 KRWVPPLVSGIEPASNE--------------ARQRSIGAATLADMTKAVVGAAFTDGGLN 562
Query: 1118 VGLIFLDRIGIKVDFVNVP------YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEA 1171
+ K+ N Y + +A + +E LL Y+F D SL VE+
Sbjct: 563 QAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVES 622
Query: 1172 LTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
+TH S Y+RL FLG +VL++++ YL+ ++P + ++SA NN
Sbjct: 623 MTHPSCTGLVQTTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLT 682
Query: 1232 LSSV---------------KHGLHKHILHASHELYKRINITVDSF------------EKL 1264
++ +H +HK++ S L+ + + D+ EK
Sbjct: 683 FIAITFHQVREQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKA 742
Query: 1265 SLGSTFGWESVTSFP----KALG------DIIESLAGAIFVDS-----GCNREVVFQSIR 1309
WE +P +ALG DII+S+ GA+F+DS C+ I
Sbjct: 743 DAIKHELWEQ-RFYPWVRLRALGDMRVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIV 801
Query: 1310 PLLEPMITPETMRFHP 1325
PLLE I+ + HP
Sbjct: 802 PLLEHFISHQITTDHP 817
>gi|74142314|dbj|BAE31919.1| unnamed protein product [Mus musculus]
Length = 672
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 68/526 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT A + + + + + V LV +V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK---VVVLVNRVHLV 60
Query: 82 PQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q AE + D K+W GDMG G + H++L+ T ++L L
Sbjct: 61 SQHAEEFRRMLD----KHWTVTTLSGDMGSRAGFGLMARS----HDLLICTAELLQLALN 112
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
S + +L ++++DECHH Y I++ + + L+ + LP++ G+TASP
Sbjct: 113 SSEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEP-LPQVLGLTASPG 171
Query: 192 ---KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDE 244
+K+ + Q +L+T C S+ ++ N P + + +
Sbjct: 172 TGGATKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGD 231
Query: 245 IPHALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+ L + +L M +LK + + + L + A+A L ++V ++ L
Sbjct: 232 LIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALH--LRRYND 289
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGF----GETIIKKFGSDASQALVTYVPSGAEW 353
L + ++A + + + DF+ E+ E+ + K D L G E
Sbjct: 290 ALFIHDTVRARDALDMLQ-DFYDRERTTKTQMVRAESWLLKLFDDHKNVLGQLAARGPE- 347
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ K + E+I+ L ++ R IIF TA SLL L +
Sbjct: 348 ----NPKLEM-----LERIL-----LKQFGSPGHTRGIIFTRTRQTA---SSLLLWLRQQ 390
Query: 414 HCTW----KTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
C K + + AGN S ++K Q E+++EFR G+++++VATS+ EEGLD+ C
Sbjct: 391 PCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQC 450
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
N+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 451 NVVVRYGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKRELTN 496
>gi|414879097|tpg|DAA56228.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 290
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
+VMTPQ+LLD LR ++ L+M+ ++I DECHHA G H Y IM EFYH G + P
Sbjct: 1 MVMTPQVLLDALRQAFLILDMVSLMIFDECHHATGNHPYTRIMKEFYH-----GSEHKPN 55
Query: 183 IFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK- 241
+FGMTASPI K SS+ D ++ +LE +++SK+++ + +P + ++Y+
Sbjct: 56 VFGMTASPIIRKGVSSDLDCKNQLSELENILDSKIHSVVDREEIELCVPSAKEVNRYYEP 115
Query: 242 ----YDEIPHALYTHLADELAMIELKHTRSLENL-DLNEAQAELIRKKVSKINSTLLYCL 296
+D++ L + +I H RS D +E E RK++S + + YCL
Sbjct: 116 RTVSFDDLSEELEILCSKYDGLIIQLHNRSTNQYKDADEITKE-SRKRLSNSLAKICYCL 174
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDAS--------------QA 342
+ G+ A +A + I W L G +T ++ G + Q
Sbjct: 175 EDAGLLCASEATK-ICIERGQRKGW--LKGGSDTTDQQSGQNGPILFAEISMLHMEFFQE 231
Query: 343 LVTYVPSGAEWSIGDDSKFNLDSGL--------LTEKIVCLIESLLEYRGVEDIRCII 392
++ + + G D+ N + G ++ K+ L++ L + +++RC+I
Sbjct: 232 VLDIIGKRVQQQQGIDALLNSERGCVEAKNMGYISPKLYELMQVFLSFSDPDNVRCLI 289
>gi|367055364|ref|XP_003658060.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
gi|347005326|gb|AEO71724.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
Length = 1118
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 147/290 (50%), Gaps = 20/290 (6%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLG 1003
+P+I+H L++ L+A +L L+ ++ I + V+ AI+T + E +E LG
Sbjct: 826 LIPAIVHALEAHLVAKDL----LESRLERTGITDLSLVVMAISTSAARGPTDYERIEFLG 881
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
DS LK+ + Y EG LS K++I+SN+ L + E L +I ++ W
Sbjct: 882 DSILKFCTTINCAAKYLKYPEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTLTLHKW 941
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFL 1123
+Y +D L N T + + +KT+ADVVEALI A +GG L +
Sbjct: 942 ------RPTY--VEDLLENPPP--ATRTRMLSTKTLADVVEALIAASYISGGIPKALACM 991
Query: 1124 DRIGIKVDFVNVPYQRQF----QVHAERL-VNVRHLESLLNYSFRDPSLLVEALTHGSYM 1178
+ ++ ++ R+ H E L V +R LESL+ Y+F +LLVEA+TH S
Sbjct: 992 SLFLPEFEWKSIEQGREILYNEAPHDEPLPVTMRPLESLIGYTFTKKALLVEAMTHPSCT 1051
Query: 1179 LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNND 1228
P I RLEFLGDA+LDY++ L++ GL L +R+A VN D
Sbjct: 1052 GPGIRASLDRLEFLGDAILDYIVVNRLFSDPAGLDNSTLHLLRTALVNAD 1101
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 252/621 (40%), Gaps = 102/621 (16%)
Query: 70 VAVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
+A FL P V L QQ E I+ ++ G VD W P
Sbjct: 1 IAWFLAPTVSLAEQQFEVIRAQIPSVQSRLIRGADNVDAWS---------------TRPG 45
Query: 129 ILLDGLRLSYFKLNMIKVLILDEC--HHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
+ LR N V+ D C H+ GK+ A +M E Y G +P I G+
Sbjct: 46 VWDAVLR------NTRIVVAADLCVAHNPVGKNSVARLMREHYFPNKAKG-LPVPHILGL 98
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN--FIPFSTAKFKFYKYDE 244
TASP+ + + DLE L + C + S + + + Y
Sbjct: 99 TASPLMT----------SNLGDLEVLEQTLDAVCKTPSKHRDELMAQVNRPEMMVVSYGA 148
Query: 245 IP----HALYTHLADEL--AMIELKHTRSLENLDLNEAQAELIRKKVSKI-NSTLLYCLS 297
IP A T + L A + L TR + L L + +++ K+ S YC +
Sbjct: 149 IPVDEAAAQPTPAMERLMKAYLGLDITRDPDILHLALNRTPRNEQRLRKLFASRKTYCQT 208
Query: 298 ELGVWL--ALKAAETISCYESDFFAWEQLDGF----------GETIIKKFGSDASQALVT 345
++ + A + + + +D++ + + G+++ K +AL
Sbjct: 209 QMESFYRRACDMCQHLGPWAADYYIHKVISTLLQDTDDSAQEGDSLTVKQRRYLVEALTP 268
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQ 404
P A + + L K+V L+ L Y+G + I+FV ER A+
Sbjct: 269 VGPGPAP---------QIPTAL-APKVVALLGILERYQG--NPVGIVFVKERATVAV--- 313
Query: 405 SLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFRRGLVNVIVA 454
LS +L H +Y G+ G ++Q+ + ++ FR+G +N++VA
Sbjct: 314 --LSHILAVHPRTAGRYRVGSMVGTSATPGRRQDFLDLSQKEYILSLQAFRKGTINLLVA 371
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENY 514
TS+LEEG+DV +CNLVI FD + SFIQ RGRARM S L+V+ DS SR+
Sbjct: 372 TSVLEEGIDVPACNLVICFDRLENLKSFIQRRGRARMSASQLYLLVED-DSDKSSRIWLD 430
Query: 515 LASGNKMRKEVLSHASLPCSPL-NNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPS 573
L K + E + + + + + TG T+ + + +C+ L +
Sbjct: 431 LEREMKRKYEDDMRENKELEEIEKSDVLDYPVLRDDKTGAQITIQDAKQHLEHFCATLST 490
Query: 574 DGYFKPTPKFHIN---------KEMGI--CTLYLPNNCP-----IQTVIAQGNIKTLKQA 617
+ +P + ++ ++ G+ T++LP + +++ A + +
Sbjct: 491 RKFVDWSPFYVVHDLEGNPIDARQRGLRKATVHLPVSLAPELRCFESIYAWPSEANACKD 550
Query: 618 ACLEACKKLHQIGALTDNLLP 638
A +A KL+++G + +LLP
Sbjct: 551 AAFQAYAKLYEVGLVNRHLLP 571
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 1143 VHA--ERLVNVRHLESLLNYS-FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
VHA LV LES L + D SL+V A++ + P Y+R+EFLGD++L +
Sbjct: 831 VHALEAHLVAKDLLESRLERTGITDLSLVVMAISTSAA---RGPTDYERIEFLGDSILKF 887
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK-RINITV 1258
T+ KY G L+ ++ V+N ++V+ GL ++I+H + L+K R
Sbjct: 888 CTTINCAAKYLKYPEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTLTLHKWRPTYVE 947
Query: 1259 DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
D E + S K L D++E+L A ++ G + + S+
Sbjct: 948 DLLENPPPATRTRMLST----KTLADVVEALIAASYISGGIPKALACMSL 993
>gi|299747526|ref|XP_001837094.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
gi|298407559|gb|EAU84711.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
Length = 1499
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 27/262 (10%)
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAE--------RL 1148
K +ADV EA+IGA +GG L + I + +N QV R
Sbjct: 1148 KAIADVTEAIIGAAYVSGGRETALDVAKALSIPIPGINTWSDLGMQVVIPFTTDAIELRP 1207
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
++ +E ++ + F+ P LL + LTH S ++ Y+RLEF+GDA+LD+++ +++++
Sbjct: 1208 GSIEAVEGIIGHRFQQPHLLAQILTHTSVHGSKV-LTYERLEFIGDAILDFMVIRHIFDR 1266
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS--- 1265
LSPG LT ++ A V N A + G++KH++ S++L I ++ + +
Sbjct: 1267 ERTLSPGGLTMLKGAMVANSTLATVCILSGIYKHLVFGSYQLSSAIEDYAEAINERADKE 1326
Query: 1266 ---------LGSTFGWESVTSFPKALGDIIESLAGAIFV-DSGC--NREVVFQSI-RPLL 1312
+ F W + PKAL D+IES+ GA+++ D+ C E F + RP
Sbjct: 1327 YALAEQENRMPGQF-WPDIEP-PKALSDVIESIIGALYISDNFCPVGTEAFFDKVLRPFF 1384
Query: 1313 EPMITPETMRFHPVRELTEYCQ 1334
+ I+ T+ HP + L EY Q
Sbjct: 1385 DKHISLRTLTHHPTKTLFEYIQ 1406
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 925 PELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEA 984
PELC P S+ F + +PSI+ +L L + L D+ + + A
Sbjct: 925 PELCAKCTIPASM--FRTSYLIPSILWKLDHLFVVKELNMQFFDNAIDEELL-----YMA 977
Query: 985 ITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLG 1044
TT + + + E LE LGD+FLKY AS +F +EG L V ++R+ISN AL
Sbjct: 978 TTTVSAEMEHNYERLELLGDAFLKYLASVVVFVMNPTQNEGSLHVARQRLISNKALLACA 1037
Query: 1045 CEQKLPGFIRTESFDPKMW 1063
+ LP +I ++ F + W
Sbjct: 1038 TQVGLPAYICSKPFLLRGW 1056
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 112/553 (20%), Positives = 217/553 (39%), Gaps = 71/553 (12%)
Query: 120 HEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG--D 177
H+V+V T Q LL+ +L ++V+I+++ H + Y+ + + RL +
Sbjct: 151 HDVIVTTSQTLLELFSKDLVQLRQVQVVIIEDAQHVKAHDCYSFLPIVQFMRLFYSPCPA 210
Query: 178 SNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKF 237
PR+F + SP ++ + + LE ++SK Y E +
Sbjct: 211 YERPRLFSLVLSP-----DLAQHPFDSRSLKLEITLHSKTYGVTEEK-----------RT 254
Query: 238 KFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK---INSTLLY 294
+ + P+ + L D+ A +E + L + + +IRK++ + I + +
Sbjct: 255 EIIDLPDRPNEVVV-LYDKSASLETTFSSLPSQLRALDPKMTVIRKRLHEAELIETQIGP 313
Query: 295 CLSELGVWLALKAAETISCYESDFFAWEQL--DGFGETIIKKFGSDASQALVTYVPSGAE 352
C +EL WL + E + D + D G T K + + + + + E
Sbjct: 314 CAAEL--WLKMSLEE----FGRDMPVSSEAPKDDVGGT--KLLEARICEKIRNWSCTPPE 365
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+ FN+ L + + +++ L+Y R +IFV+R TA+ L ++ L
Sbjct: 366 LNPSSPG-FNVTHKFL--RFLQALDACLDYGA--QFRAVIFVQRKSTALALAEIIKHL-- 418
Query: 413 RHCTWKTKYIAGNNSGIQCQSR-KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
+ K+I+ + +SR + Q E F G+ N++V T E LD+ +V+
Sbjct: 419 --PDGRFKFIS--PCSVFGKSRLETQQETFTNFASGVYNLLVVTRSAME-LDIPKATVVV 473
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK---EVLSH 528
FD + + Q + AR + S + +V+ + + + L N + ++ + +
Sbjct: 474 RFDLMDSQFLYGQIKACARGRESHLIHLVERHNDSHRRILSNAASDAERLFEWFDGLRDP 533
Query: 529 ASLPCSPLN-------------NHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDG 575
L P N + D+ +TG ++ + + S L G
Sbjct: 534 EGLVVPPANLKESSMSYYSESDEDIDKPDYVSAATTGGRLYPQDAIVTLVKFASYLREQG 593
Query: 576 Y---------FKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTL-KQAACLEACKK 625
Y ++ P C + LP V A KT+ ++AA ACK+
Sbjct: 594 YLEAGHSLFEYQSIPANPGQPLQFACKISLPGTPVDGMVSAPEMTKTISRRAAAFSACKR 653
Query: 626 LHQIGALTDNLLP 638
L +G L ++P
Sbjct: 654 LASLGLLDYRIVP 666
>gi|13194586|gb|AAK15474.1| unknown [Mus musculus]
gi|13194588|gb|AAK15475.1| unknown [Mus musculus]
gi|20809730|gb|AAH29209.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Mus musculus]
gi|148670596|gb|EDL02543.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_b [Mus musculus]
Length = 678
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 68/526 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT A + + + + + V LV +V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK---VVVLVNRVHLV 60
Query: 82 PQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q AE + D K+W GDMG G + H++L+ T ++L L
Sbjct: 61 SQHAEEFRRMLD----KHWTVTTLSGDMGSRAGFGLMAR----SHDLLICTAELLQLALN 112
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
S + +L ++++DECHH Y I++ + + L+ + LP++ G+TASP
Sbjct: 113 SSEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEP-LPQVLGLTASPG 171
Query: 192 ---KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDE 244
+K+ + Q +L+T C S+ ++ N P + + +
Sbjct: 172 TGGATKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGD 231
Query: 245 IPHALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+ L + +L M +LK + + + L + A+A L ++V ++ L
Sbjct: 232 LIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALH--LRRYND 289
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGF----GETIIKKFGSDASQALVTYVPSGAEW 353
L + ++A + + + DF+ E+ E+ + K D L G E
Sbjct: 290 ALFIHDTVRARDALDMLQ-DFYDRERTTKTQMVRAESWLLKLFDDHKNVLGQLAARGPE- 347
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ K + E+I+ L ++ R IIF TA SLL L +
Sbjct: 348 ----NPKLEM-----LERIL-----LKQFGSPGHTRGIIFTRTRQTA---SSLLLWLRQQ 390
Query: 414 HCTW----KTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
C K + + AGN S ++K Q E+++EFR G+++++VATS+ EEGLD+ C
Sbjct: 391 PCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQC 450
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
N+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 451 NVVVRYGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKRELTN 496
>gi|357129531|ref|XP_003566415.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 366
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 5/195 (2%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y F D LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 25 ADRSEAAARVERLLCYQFHDRGLLEEALTHQSFGDGSV--SYQRLEFVGDAALGNAFSNF 82
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY P + PG L+ +RSA+++ + A +V+H L+ + A L + ++S ++
Sbjct: 83 LYLTNPTIGPGALSTLRSANISTEKLARVAVRHDLYPLLRRACPRLDLLVGQFIESVKQE 142
Query: 1265 ---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
LG+ SV PK L DI+E++A A++VD + E +++ R L EP+IT ET+
Sbjct: 143 LEDDLGAAPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETI 202
Query: 1322 RFHPVRELTEYCQKN 1336
PV L E CQK+
Sbjct: 203 DEQPVSTLHELCQKH 217
>gi|70608133|ref|NP_084426.2| probable ATP-dependent RNA helicase DHX58 [Mus musculus]
gi|341940441|sp|Q99J87.2|DHX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName:
Full=Probable ATP-dependent helicase LGP2; AltName:
Full=Protein D11Lgp2; AltName: Full=RIG-I-like receptor
3; Short=RLR-3; AltName: Full=RIG-I-like receptor Lgp2;
Short=RLR
Length = 678
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 68/526 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT A + + + + + V LV +V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK---VVVLVNRVHLV 60
Query: 82 PQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q AE + D K+W GDMG G + H++L+ T ++L L
Sbjct: 61 SQHAEEFRRMLD----KHWTVTTLSGDMGSRAGFGLMAR----SHDLLICTAELLQLALN 112
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
S + +L ++++DECHH Y I++ + + L+ + LP++ G+TASP
Sbjct: 113 SSEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEP-LPQVLGLTASPG 171
Query: 192 ---KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDE 244
+K+ + Q +L+T C S+ ++ N P + + +
Sbjct: 172 TGGATKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGD 231
Query: 245 IPHALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+ L + +L M +LK + + + L + A+A L ++V ++ L
Sbjct: 232 LIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALH--LRRYND 289
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGF----GETIIKKFGSDASQALVTYVPSGAEW 353
L + ++A + + + DF+ E+ E+ + K D L G E
Sbjct: 290 ALFIHDTVRARDALDMLQ-DFYDRERTTKTQMVRAESWLLKLFDDHKNVLGQLAARGPE- 347
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ K + E+I+ L ++ R IIF TA SLL L +
Sbjct: 348 ----NPKLEM-----LERIL-----LKQFGSPGHTRGIIFTRTRQTA---SSLLLWLRQQ 390
Query: 414 HCTW----KTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
C K + + AGN S ++K Q E+++EFR G+++++VATS+ EEGLD+ C
Sbjct: 391 PCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQC 450
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
N+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 451 NVVVRYGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKRELTN 496
>gi|148670597|gb|EDL02544.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_c [Mus musculus]
Length = 533
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 68/526 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT A + + + + + V LV +V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK---VVVLVNRVHLV 60
Query: 82 PQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q AE + D K+W GDMG G + H++L+ T ++L L
Sbjct: 61 SQHAEEFRRMLD----KHWTVTTLSGDMGSRAGFGLMAR----SHDLLICTAELLQLALN 112
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
S + +L ++++DECHH Y I++ + + L+ + LP++ G+TASP
Sbjct: 113 SSEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEP-LPQVLGLTASPG 171
Query: 192 ---KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDE 244
+K+ + Q +L+T C S+ ++ N P + + +
Sbjct: 172 TGGATKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGD 231
Query: 245 IPHALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLS 297
+ L + +L M +LK + + + L + A+A L ++V ++ L
Sbjct: 232 LIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALH--LRRYND 289
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGF----GETIIKKFGSDASQALVTYVPSGAEW 353
L + ++A + + + DF+ E+ E+ + K D L G E
Sbjct: 290 ALFIHDTVRARDALDMLQ-DFYDRERTTKTQMVRAESWLLKLFDDHKNVLGQLAARGPE- 347
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ K + E+I+ L ++ R IIF TA SLL L +
Sbjct: 348 ----NPKLEM-----LERIL-----LKQFGSPGHTRGIIFTRTRQTA---SSLLLWLRQQ 390
Query: 414 HCTW----KTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSC 467
C K + + AGN S ++K Q E+++EFR G+++++VATS+ EEGLD+ C
Sbjct: 391 PCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQC 450
Query: 468 NLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
N+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 451 NVVVRYGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKRELTN 496
>gi|326533632|dbj|BAK05347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 381
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITV 1203
A+R +E LL Y FRD SLL EALTH S+ YQRLEF+GDA L +
Sbjct: 37 ADRAEAAARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSN 96
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
+LY P + PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 97 FLYLTNPTVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQ 156
Query: 1264 L---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET 1320
LG T SV PK L DI+E++A A++VD N E +++ R L EP++T ET
Sbjct: 157 ELEDDLGITPYGGSVFKAPKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAET 216
Query: 1321 MRFHPVRELTEYCQKNHFSMK 1341
+ PV L E CQK+ +K
Sbjct: 217 IDEQPVSTLHELCQKHGKDIK 237
>gi|344313227|gb|AEN04473.1| melanoma differentiation-associated protein 5 [Carassius auratus]
Length = 984
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 146/574 (25%), Positives = 257/574 (44%), Gaps = 94/574 (16%)
Query: 23 RNYQLEALENALKQ-NTIVFLETGSGKTLIAIMLLRSYAYLLRKPS---PFVAVFLVPKV 78
R+YQ+E AL++ N I+ L TGSGKT +A+ + + + L RK P V LV KV
Sbjct: 286 RDYQMEVARPALEEKNIIICLPTGSGKTRVAVYITKEH--LERKKQMGQPGKVVVLVNKV 343
Query: 79 VLVPQQAEAIKMHTDLKVGKYWGDM-GVDFWDGATW-----KEEMSKHEVLVMTPQILL- 131
LV Q H + G++ V+ GA+ + + ++++++ T QIL
Sbjct: 344 PLVEQ-------HYKAEFGRFLKHQYSVERVSGASQLKISLPQIIEQNDIIICTAQILEN 396
Query: 132 ----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-----HRLLETG 176
DG++LS F L +++DECHH + Y IM + ++LL+
Sbjct: 397 SFAKAKNGDEDGIKLSQFTL-----MVIDECHHTKKGDVYNHIMIRYLRQKHKNQLLKKQ 451
Query: 177 DSN---LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN--FIP 231
D + +P+I G+TASP V + + H L+ N +T +++ P
Sbjct: 452 DKSPVPIPQILGLTASP---GVGGAMSQQMAEQHILQICANLDAFTIKTKTFEEEEAKTP 508
Query: 232 FS-TAKFKFYKYD-------EIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRK 283
+ A+ + K D +I ++TH A L + E T++ E + + Q
Sbjct: 509 YKRIARAEERKEDPFGDVIKKIMDEIHTH-AGLLPLCE-PGTQNYEQWVVQKEQ-----N 561
Query: 284 KVSKINSTLLYCLSELGVW-LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQA 342
+ N + C L + AL + TI SD F + LD + +K S +
Sbjct: 562 AAKEENQKVRVCAEHLRHYNEALHQSNTIRM--SDAFRF--LDRYHSEELKTKSSPDDEG 617
Query: 343 LVTYVPSGA-EWSIGDDSKFNL----------DSGLLTEKIVCLIESLLEYRGVEDIRCI 391
+T + +++ D K L ++ L K + L E+ E R I
Sbjct: 618 TITITDTERFLFTLFKDKKAKLQELMGKPEYENNNLAQLKTIIL----KEFSTREVARGI 673
Query: 392 IFVERVITAIVLQSLLSELLPR--HCTWKTKYI--AGNNSGIQCQSRKKQNEIVEEFRRG 447
IF ++AI L + E P+ Y+ G+ S ++ + +Q ++++ FR+G
Sbjct: 674 IFTRTRLSAIALCQWIQE-NPKFEEVGVSASYLIGGGDQSVVKPMTAAEQKDVLQRFRKG 732
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
+N+++AT++ EEGLD+ CN+VI + + IQ+RGR R ++ Y L+ ++G
Sbjct: 733 EINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGRGRAEDGSYTLVAEAGSGVA 792
Query: 508 QSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
+ S N+ R++++S A + +N Y
Sbjct: 793 ERE------SVNEYREKMMSKAIIKVCKMNRADY 820
>gi|326497771|dbj|BAK05975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITV 1203
A+R +E LL Y FRD SLL EALTH S+ YQRLEF+GDA L +
Sbjct: 35 ADRAEAAARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSN 94
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
+LY P + PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 95 FLYLTNPTVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQ 154
Query: 1264 L---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPET 1320
LG T SV PK L DI+E++A A++VD N E +++ R L EP++T ET
Sbjct: 155 ELEDDLGITPYGGSVFKAPKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAET 214
Query: 1321 MRFHPVRELTEYCQKNHFSMK 1341
+ PV L E CQK+ +K
Sbjct: 215 IDEQPVSTLHELCQKHGKDIK 235
>gi|449459642|ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 338
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE +L+Y+F + SLL EALTH SY Y+RLEF+GD+ + +T Y + P L
Sbjct: 8 LERILSYNFNNKSLLEEALTHPSY---SASASYERLEFVGDSAIGLAVTNYFFLASPHLH 64
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL-GSTFGW 1272
G+L+ +R+A+V+ + A +V HGL+ ++ S + ++ VDS ++L GS+ +
Sbjct: 65 QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDS---VALEGSSVPY 121
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELT 1330
+ PK L DI+ES+AGAI+VD + + ++ IR LLEP+ T E ++ PV L
Sbjct: 122 GGMMKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLF 181
Query: 1331 EYCQKN 1336
+ CQ+N
Sbjct: 182 QVCQRN 187
Score = 41.6 bits (96), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EA+T E LE +GDS + A + F + H+G LS+ + +S L +
Sbjct: 24 EALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQGHLSLLRAANVSTEKLAR 83
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
+ L ++R +S P + E D G + G K K +AD+
Sbjct: 84 VAVTHGLYNYVRRDS--------PAMDDKVKEFVDSVALEGSSVPYGGMMKA-PKVLADI 134
Query: 1103 VEALIGAF 1110
VE++ GA
Sbjct: 135 VESVAGAI 142
>gi|312079013|ref|XP_003141990.1| hypothetical protein LOAG_06406 [Loa loa]
Length = 744
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 143/569 (25%), Positives = 251/569 (44%), Gaps = 67/569 (11%)
Query: 3 PVSMESDTTEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAY 61
P+S +++ + R YQ E + A +NT++ TG+GKT++A + R++
Sbjct: 37 PISASDAAKDDIYEGEVIILRKYQEELAQPAYNGRNTLICAPTGTGKTVVAASIARNHLI 96
Query: 62 LLRKPSPFVAV-FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWK----EE 116
+ RK + + F V + QQ + + VG W V F G T E
Sbjct: 97 MGRKNNLHTKISFFVTNTTFLEQQTKCFEKF----VGHRWK---VVFLSGITVNTPIAET 149
Query: 117 MSKHEVLVMTPQILLDGLRLSY------FKLNMIKVLILDECHHARGKHQYACIMTEFYH 170
++ ++++V+TPQ++++ L F L+ ++ DE HH G H Y IM YH
Sbjct: 150 IAAYDLIVITPQLIVNLLNTCNEDNGLPFSLSSFSLMFFDEAHHTDGNHPYNVIMNN-YH 208
Query: 171 RLLETGD----SNLPRIFGMTAS-PIKSKVSSSEQ-DYWQKI-HDLETLMNSKVYTCASE 223
+ G LP++ G+TAS I + ++SE +Y+ KI +L+ + S V+ E
Sbjct: 209 DMKHAGKVLDGKRLPQVVGLTASLGIGNAQNTSEAVEYFIKICANLDITVLSYVHENIDE 268
Query: 224 SVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNE-----AQA 278
L F + + K + +++ + D E R ++ +++ +
Sbjct: 269 --LRAFTSIAADETKLVASNVTTYSVAVGILDLFRRFEGILDRIARSVSISDKIHEPSNQ 326
Query: 279 ELIRK-------KVSKINSTLLYCLSELGVWLALKAAET----ISCYESD---FFAWEQL 324
E++R+ K SK+ T L V +A E ++C + F + E
Sbjct: 327 EMLRRLQNPPHDKFSKVYETWFSQLLVKFVPVAKLEKENRFLIMTCLQFIGILFRSLEHY 386
Query: 325 DGFGETIIKKFGSD--------ASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLI 376
F + KK+ + A+Q LV + + ++ + N D+ L E L
Sbjct: 387 IHFPSYVAKKYFENEFNLVRHTANQELVDIMQACPLKTVVGN---NADNELYNE---LLR 440
Query: 377 ESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQ--CQS 433
E ++ +D R I+FV R + + L + + K+ +I G N+ + QS
Sbjct: 441 ELHGQFAKQKDGRAIVFVATRDFAGQLSEELNKDESLQMLDIKSDFITGINASGENGGQS 500
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
+Q +I+ F G + ++ ATS+ EEG+D+Q CNLVI +D + +Q RGR R N
Sbjct: 501 INQQRDILARFTSGDIKILCATSVAEEGIDIQKCNLVIKYDYVTNEIAHVQRRGRGRAAN 560
Query: 494 SDYLLMVKSGDSTTQSRLENYLASGNKMR 522
S LL+ + D Q+R E + MR
Sbjct: 561 SRCLLL--TCDPKLQTREEKNIIREQIMR 587
>gi|443723522|gb|ELU11899.1| hypothetical protein CAPTEDRAFT_221268 [Capitella teleta]
Length = 740
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 231/529 (43%), Gaps = 92/529 (17%)
Query: 23 RNYQLEALENALK---QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVV 79
R YQ+E ++ L+ N ++ T SGKTL+A +L+++ K AVFLVP +
Sbjct: 73 RLYQIELVDRILELKGANAVIVAPTNSGKTLVAADILKNH---FDKVPGSKAVFLVPNGL 129
Query: 80 LVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEE-----MSKHEVLVMTPQILLDGL 134
L QQ EA+ GKY G E + ++LVMTPQIL++
Sbjct: 130 LAQQQGEAL--------GKYLPKANTKVLRGEACTSEQINDLLQTTDILVMTPQILINAY 181
Query: 135 RLSYFKLNM---IKVLILDECHHARGKHQYACIMTEFYHRLLETGD--SNLPRIFGMTAS 189
++ + I +++LDECHH K Y+ +M F+ L + LP++ G+TAS
Sbjct: 182 DDAFDQDKPSFPISLIVLDECHHCVKKAPYSQLMEIFHLHLPGRPEPLPKLPQVIGLTAS 241
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL 249
++S+S+ D + C +L+N A+ + ++ A
Sbjct: 242 ---VRISTSKTDTAE---------------CNIFKLLANM----DARLVMVEKNKDELAF 279
Query: 250 YTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
Y +E+ ++E K ++ +I+ + K + + L + L + E
Sbjct: 280 YCAPPEEI-LVEYKDRFQID---------VVIKPRKKKADLAYVQWLRNISTKL-ISLIE 328
Query: 310 TISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT 369
C E LD + +++ + ++ A Y+ A+ + +S+ L
Sbjct: 329 DAECKHDLVSCVEYLDMYNNSLMLNYECRSTDAY-NYLKERAKTLMYKESRPESTDAWLA 387
Query: 370 EKIVCLIESLLEYRGVED---------------------IRCIIF--VERVITAIVLQSL 406
+K I ++ Y D +RCIIF + +A+V +
Sbjct: 388 DKYKGKIGTIEHYLCSSDENSWLAVLKEHIMKTKKPGAPMRCIIFCRTREICSALVDWAN 447
Query: 407 LSELLPRHCTWKTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
SE L C +I G+N+ + + ++QNEI +EF G ++ ATS+ +EG+DV
Sbjct: 448 DSEEL---CDLNPGFITGSNASTSSKGLTNQQQNEIKQEFLDGRRQILFATSVAQEGVDV 504
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+ C+ VI ++ + + + IQ+RGRAR + Y ++ T+ RL++
Sbjct: 505 KKCDNVICYNFTSDMVARIQTRGRARKSGATYTVLA------TKQRLKD 547
>gi|324501737|gb|ADY40770.1| ATP-dependent RNA helicase DDX58 [Ascaris suum]
Length = 1050
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 238/545 (43%), Gaps = 82/545 (15%)
Query: 23 RNYQLEALENALKQ-NTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV-FLVPKVVL 80
R YQ E +E A + NTI+ TGSGKT++A ++R++ + V LVP V L
Sbjct: 307 RPYQEELVEAACRGVNTIICAPTGSGKTIVATYIIRNHLQEKKDAGETARVAMLVPTVPL 366
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL---- 136
V QQ+ A+ + KV G G + D + V + TPQI ++ LR
Sbjct: 367 VEQQSLALNRYLR-KVFWVEGLSGSERVDEDGRAPFVLASHVTIFTPQIFINLLRSIRKG 425
Query: 137 SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS-PIKSKV 195
N +L+ DECHH G H Y +M R+L + P++ G+TAS P+ S
Sbjct: 426 DRLYFNDFTMLVFDECHHCDGDHPYHVLM-----RMLHDYNGKKPQVVGLTASLPLGSGR 480
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFIPFSTAKFKFYKYDEIPH------- 247
++ E H ++ Y+ ++ L N T + P
Sbjct: 481 ANVEAAL---DHMMDLCAKLSAYSISTVRKHLRNLQEHVTPPIDEVRNARRPQRNMFILA 537
Query: 248 ------ALYTHLADELAMIELKHTRSLENLDLN---------EAQAELIRKKVS------ 286
+ TH+ EL +L+ T L ++N E+ ++ +++
Sbjct: 538 VQNCMTKIETHMRRELE--DLRKTLQLRPDEVNFPPHTENRYESFIGALKSRITTDMPGG 595
Query: 287 KINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQL-----------DGFGETIIKKF 335
+ L+ L LG + A T+S D FA++ L D +I K+
Sbjct: 596 SVKYQLIKMLDHLGYYYR---ALTLSDVLPDKFAYDYLANKIRNEATANDARAASIQKEL 652
Query: 336 GSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLL--EYRGVEDIRCIIF 393
+ YV +E + DD D+G +++I+ L+ ++L +Y R IIF
Sbjct: 653 ----KRLFEAYV-KLSELHLSDD-----DNGE-SKEIIRLLHNILLKQYEKEPSSRTIIF 701
Query: 394 VERVITAIVLQSLLSELL-----PRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGL 448
V + A L L+E PR + T ++ Q+ +Q ++E+F GL
Sbjct: 702 VTTRMLAEKLSEHLNECRIIDGGPRAIGFVTSSNQSSSF--SGQTAAEQRLMIEDFNTGL 759
Query: 449 VNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQ 508
V+VATS+ EEGLD+ +CNL+I ++ + + S IQ RGRAR +NS +L+ G S +
Sbjct: 760 RKVLVATSVAEEGLDISACNLIIKYNNTGSERSLIQRRGRARAKNSRSILLALDG-SIEK 818
Query: 509 SRLEN 513
LEN
Sbjct: 819 RELEN 823
>gi|304434770|ref|NP_001182108.1| melanoma differentiation associated gene 5 [Oncorhynchus mykiss]
gi|296923412|emb|CAZ27715.1| melanoma differentiation associated gene 5 [Oncorhynchus mykiss]
Length = 1002
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 141/571 (24%), Positives = 250/571 (43%), Gaps = 69/571 (12%)
Query: 15 SADTLPFA----RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-P 68
+A++ P A R+YQ++ AL+ +N I+ L TGSGKT +A+ + + + RK P
Sbjct: 294 AAESPPKAVIVLRDYQMDVARPALEGKNIIICLPTGSGKTRVAVYITKEHLDSRRKEGRP 353
Query: 69 FVAVFLVPKVVLVPQQ--AEAIK-MHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVM 125
V LV KV LV Q E K + KV + GD + ++ + + K+++++
Sbjct: 354 GKVVVLVNKVPLVEQHYSTEFWKFLKNKYKVERVSGDSQLKI----SFTDIVQKNDIVIC 409
Query: 126 TPQILLDGLRLSY------FKLNMIKVLILDECHHARGKHQYACIMTEFYHR-------L 172
T Q+L + L ++ KL+ + ++++DECHH + Y IM + +
Sbjct: 410 TAQLLENYLERAHSGDDDGIKLSDLSLIVIDECHHTQKGGVYNHIMIRYLKQKHKNAKLK 469
Query: 173 LETGDS-NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN--- 228
E D+ +P+I G+TASP V +++ + H L N Y + ++ N
Sbjct: 470 KEQKDTVAIPQILGLTASP---GVGGAKKIEKAEEHILRICANLDAYKIMTGNLGENKKE 526
Query: 229 -FIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSK 287
+TA+ + K D L + EL T L + + + + +
Sbjct: 527 PHKKIATAEER--KEDPFGDVLKGVMNAIHIHAELNPTCDLGTQNYEQWVVQKEQNAAKE 584
Query: 288 INSTLLYCLSELGVW-LALKAAETISCYESDFFAWEQLDG-FGETIIKKFGSDASQALVT 345
N + C L + AL +TI +++ F LD F E + KK +A++
Sbjct: 585 ENQKVRVCAEHLRQYNEALYLGKTIRMWDAFSF----LDKYFDEELKKKVAPGDEEAIIK 640
Query: 346 YVPSGAEWSIGDDSKFNLDS------------GLLTEKIVCLIESLLEYRGVEDIRCIIF 393
+++ DSK L L KI L E+ E R IIF
Sbjct: 641 TDTERFLFTLFKDSKVELQELAKLPQYENNSLAKLRTKI------LHEFTSREKARGIIF 694
Query: 394 VERVITAIVLQSLLSELLP-RHCTWKTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVN 450
+ +AI L + E K ++ G S ++ + +Q +++ +F+ +N
Sbjct: 695 TKTRRSAIALAQWVQENSKFEEVGVKACHVIGGGGQSAVKPMTAAEQRDVLNKFQNAEIN 754
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
+++AT++ EEGLD+ +CN VI ++ + IQ+RGR R ++S Y L+ G +
Sbjct: 755 LLIATTVAEEGLDIAACNFVIRYELVTNEVAMIQARGRGRAEDSSYTLVAGEGSGVAERE 814
Query: 511 LENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
S N+ R++++S A L+ Y
Sbjct: 815 ------SVNEYREKMMSKAIDKVKKLDQEEY 839
>gi|358348326|ref|XP_003638198.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
gi|355504133|gb|AES85336.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
Length = 472
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 9/249 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E ++ Y+FR+ +LL EALTH SY PE Y+RLEF+GDAVL + I+ +L+ Y
Sbjct: 113 SVAAVEKIIGYTFRNKNLLEEALTHSSY--PE-SVSYERLEFIGDAVLGHAISNHLFLVY 169
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
+ L+ +RSA+V+ + A ++V + LH++I +H L + I + E+ +
Sbjct: 170 TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 229
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM--RFHPVR 1327
+ PK L D++ES+A A++VD + + ++ IR LLEP++T + + PV
Sbjct: 230 VLYGGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 289
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
L E C KN K + +G + T V +G LF D K AK A K ++
Sbjct: 290 MLYEICHKN--GKKVDIRHSRNGDKS-TASVYVDGELFAVASSD-QKDIAKLDAAKSAVQ 345
Query: 1388 SLRASFPGT 1396
L P T
Sbjct: 346 KLERVLPIT 354
>gi|393909534|gb|EFO22079.2| hypothetical protein LOAG_06406 [Loa loa]
Length = 989
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 143/569 (25%), Positives = 251/569 (44%), Gaps = 67/569 (11%)
Query: 3 PVSMESDTTEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAY 61
P+S +++ + R YQ E + A +NT++ TG+GKT++A + R++
Sbjct: 245 PISASDAAKDDIYEGEVIILRKYQEELAQPAYNGRNTLICAPTGTGKTVVAASIARNHLI 304
Query: 62 LLRKPSPFVAV-FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWK----EE 116
+ RK + + F V + QQ + + VG W V F G T E
Sbjct: 305 MGRKNNLHTKISFFVTNTTFLEQQTKCFEKF----VGHRWK---VVFLSGITVNTPIAET 357
Query: 117 MSKHEVLVMTPQILLDGLRLSY------FKLNMIKVLILDECHHARGKHQYACIMTEFYH 170
++ ++++V+TPQ++++ L F L+ ++ DE HH G H Y IM YH
Sbjct: 358 IAAYDLIVITPQLIVNLLNTCNEDNGLPFSLSSFSLMFFDEAHHTDGNHPYNVIMNN-YH 416
Query: 171 RLLETGD----SNLPRIFGMTAS-PIKSKVSSSEQ-DYWQKI-HDLETLMNSKVYTCASE 223
+ G LP++ G+TAS I + ++SE +Y+ KI +L+ + S V+ E
Sbjct: 417 DMKHAGKVLDGKRLPQVVGLTASLGIGNAQNTSEAVEYFIKICANLDITVLSYVHENIDE 476
Query: 224 SVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNE-----AQA 278
L F + + K + +++ + D E R ++ +++ +
Sbjct: 477 --LRAFTSIAADETKLVASNVTTYSVAVGILDLFRRFEGILDRIARSVSISDKIHEPSNQ 534
Query: 279 ELIRK-------KVSKINSTLLYCLSELGVWLALKAAET----ISCYESD---FFAWEQL 324
E++R+ K SK+ T L V +A E ++C + F + E
Sbjct: 535 EMLRRLQNPPHDKFSKVYETWFSQLLVKFVPVAKLEKENRFLIMTCLQFIGILFRSLEHY 594
Query: 325 DGFGETIIKKFGSD--------ASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLI 376
F + KK+ + A+Q LV + + ++ + N D+ L E L
Sbjct: 595 IHFPSYVAKKYFENEFNLVRHTANQELVDIMQACPLKTVVGN---NADNELYNE---LLR 648
Query: 377 ESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQ--CQS 433
E ++ +D R I+FV R + + L + + K+ +I G N+ + QS
Sbjct: 649 ELHGQFAKQKDGRAIVFVATRDFAGQLSEELNKDESLQMLDIKSDFITGINASGENGGQS 708
Query: 434 RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
+Q +I+ F G + ++ ATS+ EEG+D+Q CNLVI +D + +Q RGR R N
Sbjct: 709 INQQRDILARFTSGDIKILCATSVAEEGIDIQKCNLVIKYDYVTNEIAHVQRRGRGRAAN 768
Query: 494 SDYLLMVKSGDSTTQSRLENYLASGNKMR 522
S LL+ + D Q+R E + MR
Sbjct: 769 SRCLLL--TCDPKLQTREEKNIIREQIMR 795
>gi|357464753|ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355491706|gb|AES72909.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 344
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 9/249 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E ++ Y+FR+ +LL EALTH SY PE Y+RLEF+GDAVL + I+ +L+ Y
Sbjct: 8 SVAAVEKIIGYTFRNKNLLEEALTHSSY--PE-SVSYERLEFIGDAVLGHAISNHLFLVY 64
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
+ L+ +RSA+V+ + A ++V + LH++I +H L + I + E+ +
Sbjct: 65 TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 124
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM--RFHPVR 1327
+ PK L D++ES+A A++VD + + ++ IR LLEP++T + + PV
Sbjct: 125 VLYGGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 184
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
L E C KN K + +G + T V +G LF D K AK A K ++
Sbjct: 185 MLYEICHKN--GKKVDIRHSRNGDKS-TASVYVDGELFAVASSD-QKDIAKLDAAKSAVQ 240
Query: 1388 SLRASFPGT 1396
L P T
Sbjct: 241 KLERVLPIT 249
>gi|226510363|ref|NP_001140816.1| uncharacterized protein LOC100272891 [Zea mays]
gi|194701228|gb|ACF84698.1| unknown [Zea mays]
gi|413948833|gb|AFW81482.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 376
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y F D +LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 35 ADRAEAAARVERLLRYQFCDRALLEEALTHQSFSDGAL--SYQRLEFVGDAALGLAFSNF 92
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY P L PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 93 LYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQE 152
Query: 1265 ---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
L + SV PK L DI+E++A A++VD + E +++ R L EP+IT ET+
Sbjct: 153 LMHDLATAPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETI 212
Query: 1322 RFHPVRELTEYCQKN 1336
PV L E CQK+
Sbjct: 213 DEQPVTTLHELCQKH 227
>gi|242090101|ref|XP_002440883.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
gi|241946168|gb|EES19313.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
Length = 377
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y F D +LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 36 ADRAEAAVRVERLLRYQFCDRALLEEALTHQSF--SDGAFSYQRLEFVGDAALGLAFSNF 93
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY P L PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 94 LYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCARLDLLVGQFIESVKQE 153
Query: 1265 ---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
L + SV PK L DI+E++A A++VD + E +++ R L EP+IT ET+
Sbjct: 154 VMHDLATAPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPVITAETV 213
Query: 1322 RFHPVRELTEYCQKN 1336
PV L E CQK+
Sbjct: 214 DEQPVTTLHELCQKH 228
>gi|413933741|gb|AFW68292.1| hypothetical protein ZEAMMB73_963828 [Zea mays]
Length = 251
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 11/239 (4%)
Query: 643 EKHDAQKRGN--EPYNAEHPIYFPPELV-NQSPQDTKITYHCYLIELKQHFNYDISARNI 699
E KRGN E Y P+YFP EL+ N + Y+CY I L+ N +I
Sbjct: 19 EAPSKAKRGNAEEKYQHGQPVYFPEELMDNWVSFSLRGLYYCYNISLQGSCNTTADPTDI 78
Query: 700 VLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDH 759
+LA++ ++ + + +F+L G + +K+L +I L QVL RRFQIT+ ++++
Sbjct: 79 ILAVKCDMGPDFFRYSFNL----GGTDITIKYLYKIHLNQEQVLFARRFQITVLSLLINS 134
Query: 760 NLDKLNEILDGF-ELRDNLEIDYLLLPSTGQLIDWKTVA-TVLFPRDNGSKHNMNCSTMF 817
N +++ + F E + +L + YLLLP+ IDW + + D K+ +C +
Sbjct: 135 NSSEVSNAIKYFREWQVDLGVVYLLLPTASGKIDWCGIKFSTSSAYDVTDKNMRHCHSCK 194
Query: 818 NARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKH 876
+A I+ T P C C + NS+V P + Y ITG+ LNAN NN S + K++
Sbjct: 195 DADILQTMDDPCCRCILQNSVVYAPRERKFYIITGL--DLNANQPLDLNNRSAVSCKRY 251
>gi|251765118|sp|Q6ATG6.2|RTL2_ORYSJ RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2
Length = 317
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 108/201 (53%), Gaps = 17/201 (8%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 31 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 88
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF--- 1261
LY P L PG L+ +R+A+++ + A +V+H L+ + R+++ V F
Sbjct: 89 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNC----PRLDLLVGQFIET 144
Query: 1262 ------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
+ LS G SV PK L DI+E++A A++VD + E +++ R L EP+
Sbjct: 145 VKQEPEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPI 202
Query: 1316 ITPETMRFHPVRELTEYCQKN 1336
IT ET+ PV L E CQK+
Sbjct: 203 ITAETIDEQPVTMLHELCQKH 223
>gi|449550119|gb|EMD41084.1| hypothetical protein CERSUDRAFT_131598, partial [Ceriporiopsis
subvermispora B]
Length = 1587
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 137/266 (51%), Gaps = 31/266 (11%)
Query: 1097 KTVADVVEALIGAFLSTGGE----------NVGLIFLDR---IGIKVDFVNVPYQRQFQV 1143
K ADVVEA+IGA +GG+ NVG+ +++ + F+ P +
Sbjct: 1226 KVCADVVEAIIGAAYLSGGQEVALRAAKVLNVGMTDIEQWSDFARRATFITDP-PASTRT 1284
Query: 1144 HAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITV 1203
H L +R +E ++ F P LL++ALTH S E+ Y RLEFLGDA+LD+L+
Sbjct: 1285 HRGFLEMLRAVEGIVGCRFEKPHLLLQALTHASIRGYEV-LNYDRLEFLGDAILDFLVIR 1343
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHE-------LYKRINI 1256
Y+Y ++ LS G LT ++ A V+N A V GL ++ LHAS + Y+RIN
Sbjct: 1344 YVYERHHNLSSGGLTLLKVAMVSNHVLAAFCVYCGLWQYALHASPDYAIAIQAYYERINN 1403
Query: 1257 TVDSFEKL--SLGSTFG--WESVTSFPKALGDIIESLAGAIFVDSGCNREVV---FQSI- 1308
+ E+L S G G W T PK L D++E++ GA++V G + + F ++
Sbjct: 1404 SRAQEERLAASEGRLPGQYWHD-TEPPKILSDVVEAVLGALYVSDGFSEANIVNFFDNVF 1462
Query: 1309 RPLLEPMITPETMRFHPVRELTEYCQ 1334
RP + I +T+ HP + L E Q
Sbjct: 1463 RPFYDRHIRLQTLSQHPKKTLFELMQ 1488
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 914 KEPSKISFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQN 973
K P+K L PELC + P S ++ + +P IM R+ LL L L H
Sbjct: 911 KTPAKY---LIPELCHRLTIPAS--SYRTTLLLPCIMRRIDDQLLIKELNAKLFQH---- 961
Query: 974 VTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKER 1033
+I +L A+ +F E LE LGD++LKY +S F T +EG L ++R
Sbjct: 962 -SISEHHLLPALFPPSADAEFDYERLEFLGDAYLKYLSSTYCFVTMPRKNEGALHYARQR 1020
Query: 1034 IISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
ISN AL LP ++++++F K+W
Sbjct: 1021 YISNKALRTGSVRLGLPSYVQSKAFVAKLW 1050
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 385 VEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAG---NNSGIQCQSRKKQNEIV 441
+D+RCII V R + A ++ LL +L + G N C +EI+
Sbjct: 342 ADDLRCIILVRRRVVANMIAELLRQLDDELEFVHPAVVTGATLTNEPDAC------SEIL 395
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
F GL NV+V T E+ ++V +LVI F+ + S+ S + + S + M +
Sbjct: 396 ANFSAGLCNVLVVTRASED-IEVPKSSLVIRFNVLESQLSYANSHALSSGRQSHLVHMAE 454
Query: 502 SGDSTTQSRLENYLASGNKMRKEVLSHASLPC--SPLNNHMYGEDFY------------H 547
G++T L NK+++ + AS PC +P N D Y H
Sbjct: 455 RGNNTHHRILSFVTTLDNKLQEWITHMASNPCGATPPGNLHESIDPYRSDDEDTADNDDH 514
Query: 548 VESTGTIATL--SSSVSLIYFYCSRLPSDGYFKPTPKFHI--------NKEMGICTLYLP 597
++ T A L ++S++Y + L F P P F + + CT++LP
Sbjct: 515 LKDPVTSAPLFKRDAMSVVYRLAASLQKTEEFVPRPLFALVTLQSELDGSPLFRCTVHLP 574
Query: 598 NNCPIQTVIAQG----NIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ + G + ++AAC CK+L G L +L P
Sbjct: 575 ESPSLPLAPVTGPPCTTVSEARKAACFCLCKELADKGVLDYHLYP 619
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI 1243
Y+RLEFLGDA L YL + Y + P + G L R ++N SV+ GL ++
Sbjct: 983 YERLEFLGDAYLKYLSSTYCFVTMPRKNEGALHYARQRYISNKALRTGSVRLGLPSYV 1040
>gi|167046032|gb|ABZ10547.1| dicer-like protein E [Trichoplax adhaerens]
Length = 359
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 164/361 (45%), Gaps = 38/361 (10%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EAIT Q+ F+LE LE LGD +L Y + + + + + + N L +
Sbjct: 1 EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60
Query: 1043 LGCEQKLPGFIRTESFDP-KMWIIPG--DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
LG +++P +I F+ K W+ PG N EL S+ R+ + + K +
Sbjct: 61 LGAGRRIPYYIVGCPFNQNKSWVPPGFVINQTVSEL---SIAMSREY---THQPLTKKAI 114
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQR-------QFQVHAERLVNVR 1152
AD VE LIG G N L F+ +G ++ Q + +++E
Sbjct: 115 ADCVEGLIGYLCLVCGRNSVLRFMRWLGFEISECLDGIQELIPSIDFRTNLYSE---TAN 171
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+E++LNYSFR+ SLL+ ALTH SY E Y++L FLGD +L Y I ++LY +Y
Sbjct: 172 SVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLIYQICLFLYTQYTDY 230
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN---------------IT 1257
P + N Y + ++ L K +LH S EL +I+ T
Sbjct: 231 QPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADDVQSFSST 290
Query: 1258 VDSFEKLSLGSTFGWE--SVTSF-PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
V S + +T E S+ F PK LGD ++ A+F+D+ + + + I LL P
Sbjct: 291 VQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDEDTAGRIINSLLNP 350
Query: 1315 M 1315
+
Sbjct: 351 I 351
>gi|413948832|gb|AFW81481.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 285
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y F D +LL EALTH S+ + YQRLEF+GDA L + +
Sbjct: 35 ADRAEAAARVERLLRYQFCDRALLEEALTHQSFSDGAL--SYQRLEFVGDAALGLAFSNF 92
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
LY P L PG L+ +R+A+++ + A +V+H L+ + L + ++S ++
Sbjct: 93 LYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQE 152
Query: 1265 ---SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM 1321
L + SV PK L DI+E++A A++VD + E +++ R L EP+IT ET+
Sbjct: 153 LMHDLATAPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETI 212
Query: 1322 RFHPVRELTEYCQKN 1336
PV L E CQK+
Sbjct: 213 DEQPVTTLHELCQKH 227
>gi|406356429|gb|AFS34611.1| melanoma differentiation-associated protein 5 [Ictalurus punctatus]
Length = 1005
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 257/575 (44%), Gaps = 97/575 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLR-KPSPFVAVFLVPKVVL 80
R+YQ + + AL+ +N I+ L TGSGKT +A+ + + + + + P V LV KV L
Sbjct: 311 RDYQKDVAQPALEGKNIIICLPTGSGKTRVAVYITKQHLERRKLRGQPAKVVVLVNKVPL 370
Query: 81 VPQ--QAEAIK-MHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILL------ 131
V Q +AE K + V + GD + ++ + + K+++++ T QIL
Sbjct: 371 VEQHYKAEFGKFLKHQYSVERVSGDSQLKI----SFPQVIEKNDIIICTAQILENSLDKA 426
Query: 132 -----DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH------RLLETGDSN- 179
DG+ LS F L +++DECHH + Y IM + RL + +
Sbjct: 427 KQGDEDGITLSQFTL-----MVIDECHHTQKGGVYNHIMIRYLKQKHKNARLQKEQNDPV 481
Query: 180 -LPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFI-PFS-TAK 236
LP+I G+TASP V ++ + H L N YT ++++ P+ A
Sbjct: 482 PLPQILGLTASP---GVGGAKTQQKAEEHILRICANLDAYTIKTKTLGEEPKGPYKRIAS 538
Query: 237 FKFYKYDE-------IPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN 289
+ K D I + ++TH +L + T++ E + + Q + N
Sbjct: 539 AQERKEDPFGDVIKGIMNEIHTHA--KLNPLCQPGTQNYEQWVVQKEQ-----NAAKEDN 591
Query: 290 STLLYCLSELGVW-LALKAAETISCYESDFFAWEQLDGF-GETIIKKFGSDASQALVTYV 347
T+ C L + AL + TI D F++ LD + E I KKF D +A++
Sbjct: 592 QTVRVCAEHLRQYNEALYQSNTIRM--CDAFSF--LDKYYNEEIKKKFTPD-DEAII--- 643
Query: 348 PSGAEWSIGDDSKF-----NLDSGLLTE-------------KIVCLIESLLEYRGVEDIR 389
I D +F N L E ++ LI L EY + R
Sbjct: 644 ------QITDTERFLFKLFNAKKERLQELMKNPEYENNSLAQLRTLI--LQEYTTRTEAR 695
Query: 390 CIIFVERVITAIVLQSLL---SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR 446
IIF + ++AI L + S+ G+ S ++ + +Q E++++FR
Sbjct: 696 GIIFTKTRLSAIALSQWIQGNSKFEDVGVRASHLIGGGDQSVVKPMTAAEQREVLKKFRD 755
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDST 506
G++N+++AT++ EEGLD++ CN+VI + + IQ+RGR R ++S Y ++ ++G
Sbjct: 756 GVINLLIATTVAEEGLDIKECNIVIRYCLVTNEIAMIQARGRGRAEDSSYTVVEEAGSGV 815
Query: 507 TQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMY 541
+ S N+ R++++S A L+ Y
Sbjct: 816 AERE------SVNEYREKMMSKAIARVCTLSREEY 844
>gi|146180696|ref|XP_001470932.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146144409|gb|EDK31487.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1822
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 13 EVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY-AYLLRKPSPFVA 71
E +T+ RNYQ E +N+ +N+I++LETG+GKT+IA ML+ + + P
Sbjct: 96 EQGKNTIYEIRNYQKELFKNSYSKNSIIYLETGAGKTMIATMLINYFFQKQKKAPQKKKI 155
Query: 72 VFLVPKVVLVPQQAEAIK---------MHTDLKVG------------------------- 97
+FL V LV QQ IK M D ++
Sbjct: 156 IFLANTVQLVKQQYAEIKNNLQRISEMMENDKEISQILKFQEGINYRRIFEKENHIVKCH 215
Query: 98 ---KYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHH 154
K ++ ++ + W + +E+ VM Q+LL+GLR Y ++ I+V+I DECHH
Sbjct: 216 GSYKQKDNLQIETFTKQKWDYLLENYEIFVMIGQVLLNGLRRGYIRIEDIEVIIYDECHH 275
Query: 155 ARGKHQYACIMTEFYHRLLETGDS-NLPRIFGMTASPI 191
R H Y I EFYH + LP+I+G+TASP+
Sbjct: 276 TRQDHPYCLIQYEFYHFHKRRNEQVQLPKIYGLTASPV 313
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
C QRLEFLGDAVLD +I YL+NK+P PG LT M+++ V N L ++ G +K I+
Sbjct: 1605 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1664
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESV--TSFPKALGDIIESLAGAIFVDSGCNRE 1302
+ + I + +++ E ++ +++ S K LGD+IESL GAIF+D+ + E
Sbjct: 1665 GSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAIFIDNNLDYE 1724
Query: 1303 VVFQSI-RPLLEPMITPETMRFHPVRELTEYCQK 1335
+ + + L ++ T + H ++ L Y +K
Sbjct: 1725 ITKKIVMETLFAEILQYFTGQEHRLKNLQLYIEK 1758
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
KQ+E +E FR+ + +I++TS+ EEG D+ SCNLVI F+ + SF+Q +GRAR +NS
Sbjct: 685 KQSENIEAFRKKELQIILSTSVTEEGFDIPSCNLVISFNKISNLKSFVQIKGRARKENSK 744
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEV------LSHASLPCSPLNNHMY---GEDFY 546
+++M K D + E + S + +++ + + P N+ Y F
Sbjct: 745 FIIMAK--DKYQKQDYETDIESYKDLIQQIKEIAPKVEKQEIEIRP--NYKYKIVKLTFN 800
Query: 547 HVESTGTIATLSSSVSLIYFYCSRL--PSDGYFKPTPKFHIN-KEMG-ICTLYLPNNCPI 602
+ TG I + SV+L + Y ++L D K ++I +G IC + +P+ +
Sbjct: 801 KNQETGAILNTNWSVNLFHTYANQLLYSYDSNIKGPFYYYIEITNVGFICQIIVPSQSGL 860
Query: 603 QTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNL 636
+T + Q + K+ AC +A L++ + D +
Sbjct: 861 KTFCSNPQAQKEDAKKDACFQAVIILYRQYKIFDQI 896
>gi|357118476|ref|XP_003560980.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 360
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+E LL Y F D +LL ALTH S+ YQRLEFLGDA LD + +LY P L
Sbjct: 25 RVERLLQYRFHDRALLELALTHQSFSGGAA--SYQRLEFLGDAALDLAFSDFLYRANPTL 82
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL----YKRINITVDSFEKLSLGS 1268
PG LT +R+A+++ + A +V+H L+ + A L + I + E +
Sbjct: 83 GPGELTTLRAANISTEKLARVAVRHDLYPLLRRACPPLDLLVGQFIELVKQELEDDFSTA 142
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRE 1328
+G V PK L DI+E++A A+++D + E ++ R L EP+IT ETM P+
Sbjct: 143 PYGG-CVVKAPKVLADIVEAIAAAVYMDCKSDIEKFWKVTRRLFEPLITVETMHEQPMSM 201
Query: 1329 LTEYCQKN 1336
L E CQK+
Sbjct: 202 LNELCQKH 209
>gi|315426340|dbj|BAJ47980.1| helicase-associated endonuclease for fork-structured DNA
[Candidatus Caldiarchaeum subterraneum]
gi|315426365|dbj|BAJ48004.1| helicase-associated endonuclease for fork-structured DNA
[Candidatus Caldiarchaeum subterraneum]
gi|343485150|dbj|BAJ50804.1| helicase-associated endonuclease for fork-structured DNA
[Candidatus Caldiarchaeum subterraneum]
Length = 694
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 222/499 (44%), Gaps = 69/499 (13%)
Query: 14 VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF 73
V DT+ R YQ +E AL+ NT+V L T GKT+IA ++ + L R P + V
Sbjct: 8 VKPDTIE-DREYQRSMVEEALRGNTLVVLPTALGKTVIAELV--AAELLHRHPGCRILV- 63
Query: 74 LVPKVVLVPQQAEAIKMHTDLK-------VGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
+ P LV Q ++ H ++ G+ + W + + ++ T
Sbjct: 64 MAPTKPLVLQHRQSFLKHLNISEDEGIAITGEVSESVRKMAWGSPSVR-------IVFST 116
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
PQ + R + +L +L+ DECH +R ++ Y + +E+ R PR+ G+
Sbjct: 117 PQTAFNDYRRGWIRLEEFALLVFDECHRSRSRYAYTRLASEYVRR------CPWPRVLGL 170
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
TASP S E+ + + +L + V+ + +S++IP K + + EIP
Sbjct: 171 TASP-----GSEEEKVLEVVKNL--WVEKIVWRTEEDEEVSSYIP--GVKVDWVRV-EIP 220
Query: 247 HALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY-CLSEL------ 299
H E + ++EN + + ++R V +N T+L ++ +
Sbjct: 221 H--------EYEEVRKAIREAIENRVRHLQRFGVVRVPVEHVNRTILVQAMARIRAEIDS 272
Query: 300 GV------WLALKAAETISCYES-DFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAE 352
GV ++AL +E +S Y + + + + E + + S+ + SG+E
Sbjct: 273 GVKGQNMHYMAL-ISEILSLYHAQELIESQHIHSLREYLREVMHSELRSHRML---SGSE 328
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVE-DIRCIIFVERVITAIVLQSLLSELL 411
+ S KI L++ + ++ + D R ++F TA V+ S L+EL
Sbjct: 329 -DFRKIIQLAAKSQADHPKIEALVQRISQHLSEKPDDRIMVFANIRNTAEVIVSRLTEL- 386
Query: 412 PRHCTWKTKYIAGNNSGIQCQSRKKQNEI--VEEFRRGLVNVIVATSILEEGLDVQSCNL 469
++ + G G +Q +I ++EFR G+ N++VATSI EEGLD+ C
Sbjct: 387 ----GYRARMFIGKGEGKTGPKMTQQEQIRLLKEFREGVFNILVATSIGEEGLDIPECGY 442
Query: 470 VIMFDPSRTVCSFIQSRGR 488
VI ++P+ + +IQ RGR
Sbjct: 443 VIFYEPAISGIRYIQRRGR 461
>gi|343469629|emb|CCD17439.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 828
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 237/533 (44%), Gaps = 77/533 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E E AL +++I++L TG GKT++A + A + K S VF+V ++VLV
Sbjct: 26 RPYQRELFEKALYRDSIIYLPTGGGKTVVAAAM----AVYMNKISGKRVVFVVDRIVLVD 81
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGA-----TWKEEM-SKHEVLVMTPQILLDGLRL 136
QQA A+ H + + V+ G W + M S LV+ I + + +
Sbjct: 82 QQA-AVLRHA------FGDNSSVETVSGPKKSVKNWNDFMYSSAGALVIINSIFYEWISV 134
Query: 137 SYFKLNM-IKVLILDECHHARGKHQYACIMTEFYHRLLE------TGDSN-----LPRIF 184
+ + ++I+DE HHARG + ++ +F H D N LP I
Sbjct: 135 CPRSIEEDVCLVIVDEVHHARGG--FGKMIMDFIHERAPREQDVCADDRNSDNITLPVIL 192
Query: 185 GMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASE-SVLSNFIPFSTAKFKFYKYD 243
G+TASP S + S + +L + ++ E + L + +P Y
Sbjct: 193 GLTASPFISFKNQS------SLEELIHVTQCRILRVTEELNSLRSSVPLPLTLSLEYCLA 246
Query: 244 EIPHALYTHLADELAMIE----LKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
A +LA+ + +I+ ++ ++L++ A ++ K S+I L C ++
Sbjct: 247 PQEDAFMLYLANSITIIQRHSIVQGNKTLKHACTFSATSQAFINKYSQIREHALKCRDKV 306
Query: 300 GV--------WLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQA-LVTYVPSG 350
+ +L + AA + + A+ + ++I + G D A LVT + G
Sbjct: 307 NLLEYAVSTFFLNVSAALIKLSEGTIYDAYNII--MNDSIFECIGKDPDVAMLVTPIFDG 364
Query: 351 AEWSIGDDSKFNL-------------DSGLLTEKIVCLIESLLEY-----RGVED-IRCI 391
+ + + NL D L V + LL++ GVE+ IR I
Sbjct: 365 LVALMNEMRRKNLEIQRVTREGPVPRDGRLTVSSRVQFLLQLLKWIANHVAGVEESIRAI 424
Query: 392 IFVE-RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQ----SRKKQNEIVEEFRR 446
+F E R +++ + S R + +S + + + KQ ++ FR+
Sbjct: 425 VFCETRACVYKIVEEIESVPCLRDVYMPLPLVGRGSSFLDGEKVNMTDAKQKGALKAFRQ 484
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
G ++VATS+ EEG+DV CNLVI FD ++ SFIQSRGRAR +N+ ++++
Sbjct: 485 GEARLLVATSVCEEGMDVAQCNLVIRFDSCVSLSSFIQSRGRARRKNALFIIL 537
>gi|167046034|gb|ABZ10548.1| dicer-like protein E [Placozoa sp. DMJ-2008]
Length = 359
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 167/361 (46%), Gaps = 38/361 (10%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EAIT Q+ F+LE LE LGD +L Y + + + + + + N L +
Sbjct: 1 EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60
Query: 1043 LGCEQKLPGFIRTESFDP-KMWIIPG--DNSGSYELNDDSLFNGRKIYVTGRKKVKSKTV 1099
LG +++P +I F+ K W+ PG N EL S+ R+ + + K +
Sbjct: 61 LGAGRRIPYYIVGCPFNQNKSWVPPGFVINQTVSEL---SIAMSREY---THQPLTKKAI 114
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVN--VP-YQRQFQVHAERLVNVR 1152
AD VE LIG G N L F+ +G ++ D + +P + +++E
Sbjct: 115 ADCVEGLIGYLCLVCGRNSVLRFMRWLGFEISECLDGIQELIPSIDFRANLYSE---TAN 171
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+E++LNYSFR+ SLL+ ALTH SY E Y++L FLGD +L Y I ++LY +Y
Sbjct: 172 SVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLIYQIYLFLYTQYTDY 230
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRIN---------------IT 1257
P + N Y + ++ L K +LH S EL +I+ T
Sbjct: 231 QPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADDVQSFSST 290
Query: 1258 VDSFEKLSLGSTFGWE--SVTSF-PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
V S + +T E S+ F PK LGD ++ A+F+D+ + + + I LL P
Sbjct: 291 VQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPHEDTAGRIINSLLNP 350
Query: 1315 M 1315
+
Sbjct: 351 I 351
>gi|426238043|ref|XP_004012967.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Ovis aries]
Length = 680
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 223/535 (41%), Gaps = 83/535 (15%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TGSGKT R+ AY+ ++ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKT-------RAAAYVAKRHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E D + + GDMG A + +H++L+ T ++L L
Sbjct: 57 VHLVTQHYEEFSRMLDRRWTITTLSGDMG----PRAGFGHMARRHDLLICTAELLQKALA 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +LN +L++DECHH Y I++ + L+ LP++ G+TASP
Sbjct: 113 SPEEEEHVELNAFSLLVVDECHHTHKDTVYNIILSRYLELKLQR-TRPLPQVLGLTASPG 171
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLS-NFIPFSTAKFKFYK--------- 241
S+ + H L+ N + S S S K Y
Sbjct: 172 TGGASTLKGAI---DHVLQLCANLDTWRIMSPQEHSPQLQEHSHQPCKQYDLCHRHTQDP 228
Query: 242 YDEIPHALYTHLADELAMIELKH---TRSLEN----LDLNEAQAELIRKKV-----SKIN 289
+ ++ L + D L M +L+ T++ E L + A+A L+ ++V + N
Sbjct: 229 FGDMLKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYN 288
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFG----ETIIKKFGSDASQALVT 345
LL + ++A + + DF+ E+ G E + D L
Sbjct: 289 DALL-------IHDTVRAVDALDTLR-DFYNRERATKTGVLHAERWLLALFDDHKNELAR 340
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQS 405
SG E + K + +L + ++R + R IIF +A L
Sbjct: 341 LATSGPE-----NPKLEVLEAILQK----------QFRSPDSPRGIIFTRTRQSAHSLLL 385
Query: 406 LLSELLPRHCTWKTKYI---AGNNSG----IQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + AGNNS IQ R +Q E++++FR G +N++VATS+
Sbjct: 386 WLQQQPGLQTVGIRPQVLIGAGNNSQKTQMIQMTQRDQQ-EVIQKFRTGTLNLLVATSVA 444
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
EEGLD+ CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 445 EEGLDIPQCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAQGSRELQRELTN 499
>gi|147844517|emb|CAN79991.1| hypothetical protein VITISV_002668 [Vitis vinifera]
Length = 435
Score = 111 bits (278), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRS-YAYLLRKPSPFVAVFLVPKVVL 80
AR YQL+ LE A K+NTI FLETG+GKTLIA++L+RS + L + +AVFLVPKV L
Sbjct: 312 ARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVPKVPL 371
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEM-SKHEVL 123
V QQAE I+ T +VG Y G+MG DFWD W+ E +KH L
Sbjct: 372 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVTL 415
>gi|406356427|gb|AFS34610.1| LGP2 [Ictalurus punctatus]
Length = 677
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 230/531 (43%), Gaps = 72/531 (13%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E ++ AL+ +N+I++L TG GKT A+ + + + L P+ VAV LV KV LV
Sbjct: 6 RPYQQEVVQVALRGENSIIWLPTGGGKTRAAVYVAKRH--LETHPNGKVAV-LVNKVHLV 62
Query: 82 PQQ-AEAIKMH--TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL---- 134
Q + + H + +K+ GD + G ++ +++ T QIL + L
Sbjct: 63 DQHFQKEFRPHLGSSVKMVPISGDSNEKDFFGCVVRDS----SLVICTAQILENALINTE 118
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ +L +LI+DECHH + Y IM + + +E LP+I G+TASP
Sbjct: 119 ESKHVELTDFTLLIIDECHHTHKEGVYNKIMARYVRKKIERV-KGLPQILGLTASPGTGG 177
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
S + + L + V T E+ L +P YD + +
Sbjct: 178 AKSLDGAITHVLEICANLDSVIVSTKNYEAELKEAVPRP-----MKNYDIVDERYWDPFG 232
Query: 255 DELAM--------IELKHTRSLENLDLNEAQA---ELIRKKVSKINSTLLYCLSELGVW- 302
D L M + L +L + E +A EL +K V + N L C L +
Sbjct: 233 DHLKMMMKLIHEFMMLDRKFTLREMGTQEYEADVVELEKKGVQEQNRLLARCALHLRKFN 292
Query: 303 LALKAAETISCYES-----DFFAWEQ---LDGFGETIIKKFGSDASQALVTYVPSGAEWS 354
AL +T+ ++ +F+ E LD E + F + + L + E
Sbjct: 293 DALLINDTVRMVDALRLLEEFYTTETRNVLDITDEFLTGLFNENKVELLQLASEASNE-- 350
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPR 413
K+ L +L++ E+ R IIF + R IT + + + R
Sbjct: 351 --------------NPKLERLQRTLVDQFKDENSRGIIFAKTREITRCLYDWVRTNPELR 396
Query: 414 HCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
+ + G +G ++++Q + ++ FR G +N++++TS+ EEGLD+ CN+VI +
Sbjct: 397 RANIRAANLVGAGTGATHMTQREQRDTIKTFREGELNLLISTSVAEEGLDIPECNVVIRY 456
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKE 524
+ Q+ GRAR +NS Y ++ K+G G +MRKE
Sbjct: 457 GLLTNEIAQQQASGRARAKNSVYSVVAKAG--------------GREMRKE 493
>gi|322798617|gb|EFZ20221.1| hypothetical protein SINV_06556 [Solenopsis invicta]
Length = 386
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 112/226 (49%), Gaps = 28/226 (12%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
P ++ +A TH SY + CYQRLEFLGDA+LD+LIT Y+Y K LSPG LTD+RSA
Sbjct: 145 PYVIFQAFTHPSYTANGLTECYQRLEFLGDAILDFLITCYIYEKCGNLSPGELTDLRSAL 204
Query: 1225 VNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF-------------- 1270
VNN +A +V++GLH +L + +++ +D F K +
Sbjct: 205 VNNITFACLAVRYGLHIALLAYA----PKLDEIIDRFVKFQEDRDYVVNDELLYVLIEEE 260
Query: 1271 --GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT--PETMRFHPV 1326
PK LGD+ ESL GAI++DSG + +++ I L+ I ++ PV
Sbjct: 261 ECNLVEYVDVPKVLGDLFESLIGAIYLDSGKDLVKIWEIIYTLMHKEIDEFSRSIPKQPV 320
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKAAVTVEVQ---ANGRLFEHTF 1369
R + E+ K A+ I G V + ++ A F H F
Sbjct: 321 RVIYEHTD---LRPKFLEATLIKGTGRVMIPLKVTIAGKEKFFHGF 363
>gi|313212467|emb|CBY36441.1| unnamed protein product [Oikopleura dioica]
Length = 2196
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 176/406 (43%), Gaps = 88/406 (21%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P +L A+T + F+LE LE GDSF+K A ++ L++ Y + +G L+ + IS
Sbjct: 1670 PPSLLLRALTQPTANDFFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYIS 1729
Query: 1037 NAALCKL--------GCEQ------------------KLPGFIRT--ESFDP--KMWIIP 1066
NA KL C Q + PG++ + E+F P + W
Sbjct: 1730 NANFLKLLKLRLSDGSCLQIPRYMNCYDNSRKTSGVIRAPGYVYSYNENFCPNAQPWYKL 1789
Query: 1067 GDNSGSYE----LNDDSLF---NGRK-----IYVTGRKKVKSKTVADVVEALIGAFLSTG 1114
DN E + D S F N R ++ + K K ADVVE+LIGA+L TG
Sbjct: 1790 DDNGDETEIFPPMTDCSQFVSENFRDTHFNYMFFDSKDKRVDKKTADVVESLIGAYLVTG 1849
Query: 1115 GENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVN--------VRHLESLLNYSFRDPS 1166
GE + F+ + + + + E LV + L++ L Y+F+ P
Sbjct: 1850 GEKMAARFVIMLN---NLYKMTVDSSPEFLEEDLVEPDPRTQSIIDELQNELEYTFKTPH 1906
Query: 1167 LLVEALTHGSYMLPEIPR-CYQRLEFLGDAVLDYLITVYLYNKY-PGLSPGYLTDMRSAS 1224
L AL Y + P+ ++RLEFLGDAVLDYL+ LYN+ L G LTD++ +
Sbjct: 1907 LCRLALAKKKYT--KDPKDNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLKQSI 1964
Query: 1225 VNNDCYALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTFG----------- 1271
+N+ + + GL + L + I+ ++ F+ L G
Sbjct: 1965 TSNNLFGSLAFCMGLPQSTLMKASAAKDHISCMYKLEQFKNLLNKPKHGVPLNPDLKRVL 2024
Query: 1272 ----WESVTS------------FPKALGDIIESLAGAIFVDSGCNR 1301
W + TS PK GD+ ES+ GA+++D CN+
Sbjct: 2025 EKANWNNKTSNRAGPYSSYLLDIPKWFGDVFESMFGAVWLD--CNQ 2068
>gi|388495198|gb|AFK35665.1| unknown [Medicago truncatula]
Length = 344
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 9/249 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E ++ Y+FR+ +LL EALTH SY PE Y+RLEF+GDAVL + I+ +L+ Y
Sbjct: 8 SVAAVEKIIGYTFRNKNLLEEALTHSSY--PE-SVSYERLEFIGDAVLGHAISNHLFLVY 64
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
+ L+ +RSA+V+ + A ++V + LH++I +H L + I + E+ +
Sbjct: 65 TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 124
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM--RFHPVR 1327
+ K L D++ES+A A++VD + + ++ IR LLEP++T + + PV
Sbjct: 125 VLYGGAVKASKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 184
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLK 1387
L E C KN K + +G + T V +G LF D K AK A K ++
Sbjct: 185 MLYEICHKN--GKKVDIRHSRNGDKS-TASVYVDGELFAVASSD-QKDIAKLDAAKSAVQ 240
Query: 1388 SLRASFPGT 1396
L P T
Sbjct: 241 KLERVLPIT 249
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EA+T E E LE +GD+ L +A S LF Y N + LS+ + +S L +
Sbjct: 28 EALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEKLAR 87
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
L +IR ++ I + E GR I + G SK +ADV
Sbjct: 88 AAVSNCLHRYIRLKTHSLAEHIREFAAAVEQE-------KGRAIVLYGGAVKASKVLADV 140
Query: 1103 VEALIGA 1109
VE++ A
Sbjct: 141 VESVAAA 147
>gi|449526603|ref|XP_004170303.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 2-like
[Cucumis sativus]
Length = 338
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE +L+Y+F + SLL EALTH SY Y+RLEF+GD+ + IT Y + P L
Sbjct: 8 LERILSYNFNNKSLLEEALTHXSY---SASASYERLEFVGDSAIGLAITNYFFLASPHLH 64
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL-GSTFGW 1272
G+L+ +R+A+V+ + A +V HGL+ ++ S + ++ VDS ++L GS+ +
Sbjct: 65 QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDS---VALEGSSVHY 121
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELT 1330
+ PK L DI+ES+AGA++VD + + ++ IR LLEP+ T E ++ PV L
Sbjct: 122 GRLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLF 181
Query: 1331 EYCQKN 1336
+ Q+N
Sbjct: 182 QVGQRN 187
Score = 41.6 bits (96), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EA+T E LE +GDS + A + F + H+G LS+ + +S L +
Sbjct: 24 EALTHXSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQGHLSLLRAANVSTEKLAR 83
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
+ L ++R +S P + E D G ++ GR K +AD+
Sbjct: 84 VAVTHGLYNYVRRDS--------PAMDVKVKEFVDSVALEGSSVHY-GRLMKAPKVLADI 134
Query: 1103 VEALIGA 1109
VE++ GA
Sbjct: 135 VESVAGA 141
>gi|289596778|ref|YP_003483474.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
gi|289534565|gb|ADD08912.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
Length = 756
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 230/481 (47%), Gaps = 46/481 (9%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+ ++AL+ NT+V L TG GKT+IAI++L +L+K + +FL P LV
Sbjct: 16 REYQVSIAKSALRGNTLVVLPTGLGKTIIAILVL---VEVLQKKGGKI-LFLAPTKPLVE 71
Query: 83 QQAEAIKMHTDLK-VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
Q A IK T ++ V G++ KE +V+V TPQI+ + + K+
Sbjct: 72 QHARTIKKLTKIEDVIVLTGEVS-----RKKRKELYGSAKVVVATPQIIQNDIIAGELKI 126
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
++I DE H A G + Y I ++ ++ + +L I G+TASP E+
Sbjct: 127 GDFSLVIFDEAHRAVGNYAYVYIAKKYR----KSREDHL--ILGITASP-----GGDEEK 175
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH------ALYTHLAD 255
+ I +L + N ++ T + V F + +EI LY +
Sbjct: 176 IMEIIENL-GIENVEIRTEEDKDVKKYVKGFKIKWIELPMPNEIRELYGKLKELYNSIIT 234
Query: 256 ELAMIELKHT-RSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
EL L T + D+ AQ +++++++ S + + + + +A+K +
Sbjct: 235 ELRKFGLFSTLKKPTRRDVLRAQ-KIVQQEIKDGKSE--FYQAAMLITMAIKIDYALEYL 291
Query: 315 ESDFF--AWEQLDGFGETIIKKFGSDASQALVT---YVPSGAEWSIGDDSKFNLDSGLLT 369
E+ F A+ L E K GS A++ LV ++ ++ K ++++ L
Sbjct: 292 ETQGFEAAYNYLLRIIEEGNSKGGSKAARTLVRDERFIEMMKIARKIEERKGDIENPKLN 351
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP--RHCTWKTKYIAGNNS 427
V + + L E + D R I+F TA ++ + L+E+ P R + + G +
Sbjct: 352 ALRVIIRKELAENK---DSRIIVFTHFRETAQLVANALNEV-PGVRAARFVGQASKGEDK 407
Query: 428 GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRG 487
G++ +K+Q E+VE+F++G NV+VATS+ EEGLD+ + ++VI ++P + IQ RG
Sbjct: 408 GLR---QKEQVELVEKFKKGEYNVLVATSVAEEGLDIPATDMVIFYEPVPSEIRSIQRRG 464
Query: 488 R 488
R
Sbjct: 465 R 465
>gi|116205049|ref|XP_001228335.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
gi|88176536|gb|EAQ84004.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
Length = 1227
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 154/328 (46%), Gaps = 24/328 (7%)
Query: 910 QQKQKEPSKISFE--LPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLL 967
Q +PS + LP + R+ P + +P+I H L+ L+A K++L
Sbjct: 881 QNSAPKPSSKPYPRILPADQVRVDKVPAIYAQI--GMMIPAITHALEVHLVA---KDLLE 935
Query: 968 DHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLL 1027
Q ++ AIT + E +E LGDS LK+ + TY EG L
Sbjct: 936 SRLEQTGITDLSLIVTAITASAARGPTDYERIEFLGDSILKFCTTINCSATYLKFPEGCL 995
Query: 1028 SVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIY 1087
S K++I+SN+ L + + L +I ++F W +Y +D + N
Sbjct: 996 SPLKDKIVSNSRLFRAAVDFGLDRYIIHKAFTLHKW------RPTYV--EDLIENPPS-- 1045
Query: 1088 VTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHA-- 1145
T +++ +K +ADVVEALIG +GG + L + V + ++ Y R+ +
Sbjct: 1046 ATETRRISTKIIADVVEALIGTAFVSGGISKALACMSLFLPDVAWNSIEYGREVMYNEAP 1105
Query: 1146 --ERLV-NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
E L +R LESL+ Y+F +LLVEA+TH S P I RLEFLGDA+LDY++
Sbjct: 1106 DDEPLPRTMRQLESLVGYTFTKKALLVEAMTHPSCNGPGIRASLDRLEFLGDAILDYVVV 1165
Query: 1203 VYLY--NKYPGLSPGYLTDMRSASVNND 1228
L+ + L L +R+A VN D
Sbjct: 1166 NKLFAISDPAPLENSSLHLLRTALVNAD 1193
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 154/631 (24%), Positives = 255/631 (40%), Gaps = 122/631 (19%)
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKY-WGDMGVDFWD--GATWKEEMSKHEVLVMT 126
+ FL P V L QQ EAI+ K G VD W W VL+ T
Sbjct: 95 IVWFLAPTVSLAEQQFEAIRAQIPGVQSKLILGSDSVDAWSTQPGVWDA------VLLNT 148
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
P +L +I H+A+G++ A +M E Y G +P I G+
Sbjct: 149 P----------IPQLTLI-------AHNAKGRNPIARLMKEHYVPSKAEG-LPVPHILGL 190
Query: 187 TASPI-KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSN--FIPFSTAKFKFYKY- 242
TASP+ +S +S DLE L + C + S + + + K Y
Sbjct: 191 TASPLMRSNLS-----------DLEVLEQTLDAVCKTPSKHRDELMAQVNRPEMKVTAYG 239
Query: 243 -------DEIPHALYTHLAD---ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTL 292
D P L EL + + + R L +A L KKV T
Sbjct: 240 SMINPETDTEPTPTMAKLKSAYLELDIRQDPYVRHLLTDKTPRGRARL--KKVLLTKQT- 296
Query: 293 LYCLSELGVWL--ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSG 350
YC S++ + A ++ + +D++ +I F D + P
Sbjct: 297 -YCRSQMEAFCRGAFDICKSCGPWAADYYI--------HRVISAFVKDPAPV----APGH 343
Query: 351 AEWSIGD-DSKFNLDSGL-------------LTEKIVCLIESLLEYRGVEDIRCIIFV-E 395
++ + + K+ +++ L L+ K+ L+ +L ++ E+ I+FV E
Sbjct: 344 TNENLAEQERKYLVEAFLKVDAQAPPEIPTTLSPKVQALLGALESHQ--ENPFGIVFVRE 401
Query: 396 RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEI----------VEEFR 445
R A+ LS +L H +Y G+ G ++Q+ + + FR
Sbjct: 402 RATVAV-----LSHILAVHPKTSHRYRVGSMVGTSRVPGRRQDFLDLSQKEYLLSLLSFR 456
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
+G +N++VATS+LEEG+DV +CNLVI FD + SFIQ RGRARM S L+V+ ++
Sbjct: 457 KGTINLLVATSVLEEGIDVPACNLVICFDKPDNLKSFIQRRGRARMSASRLYLLVED-EA 515
Query: 506 TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVES--TGTIATLSSSVSL 563
SR L K + E + + N + D+ + S TG T+ + S
Sbjct: 516 DGSSRGWQNLEQEMKRKYEDDMRENQRLEEIEN-IEDMDYPVLRSQETGAQITILDAKSH 574
Query: 564 IYFYCSRLPSDGYFKPTPKFHINKEMG-----------ICTLYLPNNCP-----IQTVIA 607
+ +C+ L + + +P + ++ G T++LP + Q++ A
Sbjct: 575 LEHFCATLSTRKFVDWSPFYVVHDLEGNPVDPHQPGLRKATVHLPVSLAPELRCFQSLQA 634
Query: 608 QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+ + A +A KL+++G + NLLP
Sbjct: 635 WTSEANACKDAAFQAYAKLYEVGLVNHNLLP 665
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 1141 FQVHAERLVNVRHLESLLNYS-FRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
+VH LV LES L + D SL+V A+T + P Y+R+EFLGD++L +
Sbjct: 924 LEVH---LVAKDLLESRLEQTGITDLSLIVTAITASAA---RGPTDYERIEFLGDSILKF 977
Query: 1200 LITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVD 1259
T+ Y G L+ ++ V+N ++V GL ++I+H + L+K V+
Sbjct: 978 CTTINCSATYLKFPEGCLSPLKDKIVSNSRLFRAAVDFGLDRYIIHKAFTLHKWRPTYVE 1037
Query: 1260 SFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
+ +T E+ K + D++E+L G FV G ++ + S+
Sbjct: 1038 DLIENPPSAT---ETRRISTKIIADVVEALIGTAFVSGGISKALACMSL 1083
>gi|302826370|ref|XP_002994673.1| hypothetical protein SELMODRAFT_432577 [Selaginella moellendorffii]
gi|300137177|gb|EFJ04260.1| hypothetical protein SELMODRAFT_432577 [Selaginella moellendorffii]
Length = 176
Score = 110 bits (274), Expect = 7e-21, Method: Composition-based stats.
Identities = 72/182 (39%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG 1271
L PG LTD+RSA+VNN +A V+HGLH+H+ H EL I V + ++ S F
Sbjct: 1 LPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGLVELDCEIRKFVQNVKEKPDASCF- 59
Query: 1272 WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTE 1331
E +++ PK LGD++ES+ GAIFVD+ + E +++ + PLL P++TP T+RFHPV L E
Sbjct: 60 -EDLSA-PKVLGDLLESITGAIFVDTNFDLERLWRVVLPLLSPLVTPATLRFHPVHILME 117
Query: 1332 YCQKNHFSMKKPVASRISGKAAVT-VEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
C + MK S +A T V V T + +K+AK A ++L SL+
Sbjct: 118 LCARK--GMK---VSFFRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKMLASLQ 172
Query: 1391 AS 1392
S
Sbjct: 173 TS 174
>gi|297834980|ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
gi|297331212|gb|EFH61631.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
Length = 391
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 16/246 (6%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
LE +LNY F++ SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP L
Sbjct: 63 LEKILNYKFKNKSLLKEAITHTS--CTDFP-SYERLEFVGDSAIGLAISNYLYLTYPSLE 119
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
P L+ +R+A+V+ + A ++ HGL++ + + L +++ D+ K S +
Sbjct: 120 PHQLSLLRAANVSTEKLARVTLNHGLYQFLRRNAPSLDEKVKEFSDAVGKEDDFSV-AYG 178
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTE 1331
+ PK L D+ ES+AGA++VD + + ++ R LLEP++T + ++ PV L +
Sbjct: 179 GLVKAPKVLADLFESVAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238
Query: 1332 YCQKN--HFSMKKPVASRIS-GKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
C K+ +K IS + E A+GR +K A+ +A KE L+
Sbjct: 239 LCHKHKKRIDIKNWKDGNISIADIYLDDEFLASGRA-------ENKDIARLIAAKEALRK 291
Query: 1389 LRASFP 1394
L FP
Sbjct: 292 LSEVFP 297
>gi|62751389|ref|NP_001015545.1| probable ATP-dependent RNA helicase DHX58 [Bos taurus]
gi|59858269|gb|AAX08969.1| hypothetical protein FLJ11354 [Bos taurus]
gi|296476327|tpg|DAA18442.1| TPA: RNA helicase LGP2 [Bos taurus]
Length = 680
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 226/535 (42%), Gaps = 83/535 (15%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TGSGKT R+ AY+ R+ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKT-------RAAAYVARRHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E + + + GDMG A + +H++L+ T ++L L
Sbjct: 57 VHLVTQHCEEFSRMLERRWTITTLSGDMG----PRAGFGHVARRHDLLICTAELLQKALA 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +LN +L++DECHH Y I++++ L+ LP++ G+TASP
Sbjct: 113 SPEEEEHVELNAFSLLVVDECHHTHKDTVYNIILSQYLELKLQR-TRPLPQVLGLTASPG 171
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLS-NFIPFSTAKFKFYK--------- 241
VS+ E H L+ N + S S S K Y
Sbjct: 172 TGGVSTLEGAI---DHVLQLCANLDTWCIMSPKDHSPQLQEHSHQPCKQYDLCHRRTQDP 228
Query: 242 YDEIPHALYTHLADELAMIELKH---TRSLEN----LDLNEAQAELIRKKV-----SKIN 289
+ ++ L + D L M +L+ T++ E L + A+A L+ ++V + N
Sbjct: 229 FGDMLKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYN 288
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG----FGETIIKKFGSDASQALVT 345
LL + ++A + ++ DF+ E+ E + D L
Sbjct: 289 DALL-------IHDTVRAVDALNTLR-DFYNRERTTKTQILHAERWLLALFDDHKNELAR 340
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQ 404
SG E + K + +L ++R + R IIF R +L
Sbjct: 341 LATSGPE-----NPKLEVLEAILQR----------QFRSPDSPRGIIFTRTRQSAHSLLL 385
Query: 405 SLLSELLPRHCTWKTKYIAG--NNSG----IQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + + + + G NNS IQ R +Q E++++FR G +N++VATS+
Sbjct: 386 WLQQQPGLQTVDIRPQVLTGAGNNSQKTQMIQMTQRDQQ-EVIQKFRTGTLNLLVATSVA 444
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
EEGLD+ CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 445 EEGLDIPQCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAQGSRELQRELTN 499
>gi|242221926|ref|XP_002476701.1| predicted protein [Postia placenta Mad-698-R]
gi|220724029|gb|EED78105.1| predicted protein [Postia placenta Mad-698-R]
Length = 232
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 21/238 (8%)
Query: 984 AITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKL 1043
A+T QE + + LETLGD+ LKY S +LF Y HEG L+ +K+ +SN L K
Sbjct: 1 ALTAPVAQELINYQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKC 60
Query: 1044 GCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSL-FNG---RKIYVTGRKKVKSKTV 1099
+ L +I + F P+ W P SG ++ + NG K T +++ +K +
Sbjct: 61 AISKGLYQWIIRDRFVPRKW-RPHYMSGPEDIGSRTEGANGNNDDKKKKTKTQELSTKVL 119
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV---------- 1149
ADVVE+LIGA GG ++ + + G+ +P + H + ++
Sbjct: 120 ADVVESLIGAAYEHGGFDLAVNCISIFGL-----GLPSWQTIPQHIDNIMTKIEELDYPP 174
Query: 1150 -NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
+ +E++L Y F +LLV+ALTH SY Y+RLEFLGD+ LD ++T +LY
Sbjct: 175 PQLSLVETMLGYEFTHKALLVQALTHASYHGDLTTMSYERLEFLGDSALDMVVTDWLY 232
Score = 46.6 bits (109), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
YQRLE LGD VL Y+ ++ L+ YP GYL + +V+N A ++ GL++ I+
Sbjct: 13 YQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKCAISKGLYQWII 71
>gi|18402610|ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
gi|75274109|sp|Q9LTQ0.1|RTL2_ARATH RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2; AltName: Full=Ribonuclease three-like
protein 2
gi|9294562|dbj|BAB02825.1| unnamed protein product [Arabidopsis thaliana]
gi|332642855|gb|AEE76376.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
Length = 391
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 22/249 (8%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +LNY F + SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP L
Sbjct: 63 VEKILNYKFSNKSLLKEAITHTSCT--DFP-SYERLEFIGDSAIGLAISNYLYLTYPSLE 119
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL-SLGSTFGW 1272
P L+ +R+A+V+ + A S+ HGL+ + + L +++ ++ K L ++G
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG- 178
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELT 1330
+ PK L D+ ESLAGA++VD + + ++ R LLEP++T + ++ PV L
Sbjct: 179 -GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLF 237
Query: 1331 EYCQKNHFSMKKPVASRISGKAAVTV-----EVQANGRLFEHTFLDADKKTAKKVACKEV 1385
+ C K+ + + + G ++ V E+ A+GR +K A+ +A KE
Sbjct: 238 KLCHKHKKRID--IKNWKDGNVSIAVIYLDDELLASGRA-------ENKDIARLIAAKEA 288
Query: 1386 LKSLRASFP 1394
L+ L FP
Sbjct: 289 LRKLSEVFP 297
>gi|348681952|gb|EGZ21768.1| hypothetical protein PHYSODRAFT_489360 [Phytophthora sojae]
Length = 715
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R +Q E LE A ++N ++ +TG GKT +AI LL + K A F+ P LV
Sbjct: 7 RAFQREILELAREKNVVMVGDTGIGKTFLAIALLSEQDFSGDKR----AFFMAPTRQLVV 62
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
Q I+ + L V Y G D WD A W+ E+ VLV TP+I+ + L Y L+
Sbjct: 63 QITAKIRQTSTLSVNAYCGSTA-DLWDAAQWERELQLTRVLVCTPEIVRNVLLKGYVTLS 121
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ +L+ DECHH +H YA ++ F H E + LPRIFG TA P +
Sbjct: 122 RMNLLVFDECHHVTKRHPYAQVVKIFNH---EDDAAALPRIFGTTACPTR 168
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
K + +F G + V+++T++ EG+D C L+++ D T +Q +GRAR ++
Sbjct: 472 KMETTLRKFESGSIRVLISTAVSVEGVDFPQCGLIVVMDRVGTSRMLMQLKGRARHEDGI 531
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL------PCSPLNNHM-YGEDFYHV 548
+ + GD + + + + + SH + P S M GE +
Sbjct: 532 VYYLAEEGDLAHEVYYKQLVREAETINQLEFSHERVETIQQQPRSIAAQMMGNGEQKIEI 591
Query: 549 ESTGTIATLSSSVSLIYFYCSRLPSDGY 576
ESTG + L SS+ I +C LPS Y
Sbjct: 592 ESTGAVLDLDSSIVCINQFCQSLPSRLY 619
>gi|17511264|gb|AAK68755.2| Unknown protein [Arabidopsis thaliana]
gi|20148705|gb|AAM10243.1| unknown protein [Arabidopsis thaliana]
Length = 391
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 22/249 (8%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +LNY F + SLL EA+TH S + P Y+RLEF+GD+ + I+ YLY YP L
Sbjct: 63 VEKILNYKFSNKSLLKEAVTHTSCT--DFP-SYERLEFIGDSAIGLAISNYLYLTYPSLE 119
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL-SLGSTFGW 1272
P L+ +R+A+V+ + A S+ HGL+ + + L +++ ++ K L ++G
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG- 178
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELT 1330
+ PK L D+ ESLAGA++VD + + ++ R LLEP++T + ++ PV L
Sbjct: 179 -GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLF 237
Query: 1331 EYCQKNHFSMKKPVASRISGKAAVTV-----EVQANGRLFEHTFLDADKKTAKKVACKEV 1385
+ C K+ + + + G ++ V E+ A+GR +K A+ +A KE
Sbjct: 238 KLCHKHKKRID--IKNWKDGNVSIAVIYLDDELLASGRA-------ENKDIARLIAAKEA 288
Query: 1386 LKSLRASFP 1394
L+ L FP
Sbjct: 289 LRKLSEVFP 297
>gi|334322694|ref|XP_001366879.2| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Monodelphis
domestica]
Length = 679
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 231/535 (43%), Gaps = 77/535 (14%)
Query: 17 DTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVP 76
+ LP+ L ALE +N I++L TG+GKT A + + + ++ VAV LV
Sbjct: 2 ELLPYQWEVILPALEG---KNIIIWLPTGAGKTRAAAYVAKRHLDMMDGAK--VAV-LVN 55
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYWG--DMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
KV LV Q + + +G W M D A + + ++++ T ++L L
Sbjct: 56 KVHLVSQHEKEFRQ----MLGPQWTIVTMSGDRGPRAGFGHMVRCTDLVICTAELLRLAL 111
Query: 135 ----RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP 190
+ +L+ +LI+DECHH + Y I++ + R L+ G + LP++ G+TASP
Sbjct: 112 ISTEEEEHVELSAFSLLIVDECHHTQKDSVYNVILSHYLERKLQ-GATALPQVLGLTASP 170
Query: 191 IKSKVSSSEQDYWQKIHDLETLMN-SKVYTCASESVLSNFIPFSTAKFKFYK-------- 241
S+ E K H L+ N + + + S+ K Y
Sbjct: 171 GTGGASTLEG---AKNHILQLCANLDTCHISSPQRYYEQLEEHSSRPCKRYDLSQERNPD 227
Query: 242 -YDEIPHALYTHLADELAMIELKHTRSLENLDL------NEA--QAELIRK----KVSKI 288
+ ++ L + D L M EL +N + N+A Q L R+ + +
Sbjct: 228 PFGDLLKKLMDEIQDRLEMPELSRDFGSQNYEQQVVELSNKAAEQGHLQRRVFAMHLRRY 287
Query: 289 NSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFG----ETIIKKFGSDASQALV 344
N LL + ++A + ++ S F+ EQ+ G E + + +AL
Sbjct: 288 NDALL-------IHGTVRAVDALTSLAS-FYTEEQMTKVGVLPAERWLLQLFDRHKEALA 339
Query: 345 TYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE--YRGVEDIRCIIFVERVITAIV 402
+ D++F ++ L + +E +LE + + R IIF +A
Sbjct: 340 L---------LASDAQF--ENPKLKD-----LEDILEELFSSPDPSRGIIFARTRRSARA 383
Query: 403 LQSLLSELLPRHCTWKTKY----IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L L E PR K AGN+S I ++ +Q E+++ FR G +N++VATS+
Sbjct: 384 LVLWLQEQ-PRLQRLGIKAHVLTGAGNSSQITHMTQTEQREVIQRFREGTLNLLVATSVA 442
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
EEGLD+ CN+++ +D S +Q+RGRAR S Y + G + N
Sbjct: 443 EEGLDIPQCNMIVRYDLLTNEISMMQARGRARASQSMYSFVAGQGSKELHREMTN 497
>gi|62734194|gb|AAX96303.1| Similar to probable ATP-dependent RNA helicase - fission yeast
(Schizosaccharomyces pombe) [Oryza sativa Japonica
Group]
gi|77548994|gb|ABA91791.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
Length = 1488
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 140/527 (26%), Positives = 230/527 (43%), Gaps = 73/527 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ + +E AL NT+V L TG GKT IA +++ Y Y P + VF P LV
Sbjct: 249 REYQKKFVEKALFTNTLVALPTGLGKTFIAAVVM--YNYFRWFPEGKI-VFTAPTRPLVT 305
Query: 83 QQAEAIKMHTDLKVGKYWG-DMGVDFWDGAT---WKEEMSKHEVLVMTPQILLDGLRLSY 138
QQ EA H + + + W D+ + WK + V +TPQ+L + ++
Sbjct: 306 QQIEAC--HNTVGIPQEWTIDLKGNLSPSKRSCFWKSK----RVFFVTPQVLQNDIQSGI 359
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+N + L++DE H A + Y ++ E LE L RI +TA+P S
Sbjct: 360 CMVNQLVCLVIDEAHRASRNYAYCVVVRE-----LEAARVPL-RILALTATP------GS 407
Query: 199 EQDYWQKIHDLETLMNSKVYTC-ASESVLSNFIPFSTAK--------FKFYKYDEIPHAL 249
+Q Q + + L S++ C S+ +S +I T + KF + +
Sbjct: 408 KQPAIQNV--INNLRISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGDEAEQV 465
Query: 250 YTHLADELA--MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
L D + +++L+ R +++ D + +R K + + LA K
Sbjct: 466 NDKLLDVIRPHLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQA-----PPPNIPLADKK 520
Query: 308 AETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF------ 361
IS F A L G + ++ A Q++ G+ + ++ F
Sbjct: 521 EIGIS-----FQALTLLYGIMKMLLSYGIKAAHQSIEAKYKEGSWKVLTRNNTFLEVKKT 575
Query: 362 ---NLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHC 415
L G+L+ K+ L+E LL++ + +D R IIF R +L SL + +
Sbjct: 576 MENFLSQGILSPKVRTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRN--IDGEL 633
Query: 416 TWKTKYIAGNNSGIQC--QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
+I +++G Q Q++K Q I+ +FR G N++VATSI EEGLD+ +LV+ F
Sbjct: 634 VRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVDLVVCF 693
Query: 474 DPSRTVCSFIQSRGRARMQNS---DYLL------MVKSGDSTTQSRL 511
D + + IQ GR +N D L + K G++ T +L
Sbjct: 694 DANISALRMIQRMGRTGRKNEGRVDILFLEMKGYLSKQGNTKTMKKL 740
>gi|313224452|emb|CBY20242.1| unnamed protein product [Oikopleura dioica]
Length = 2082
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 171/401 (42%), Gaps = 90/401 (22%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P +L A+T + F+LE LE GDSF+K A ++ L++ Y + +G L+ + IS
Sbjct: 1670 PPSLLLRALTQPTANDFFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYIS 1729
Query: 1037 NAALCKL--------GCEQ------------------KLPGFIRTESFDPKMWIIPGDNS 1070
NA KL C Q + PG++ + D GD +
Sbjct: 1730 NANFLKLLKLRLSDGSCLQIPRYMNCYDNSRKTSGVIRAPGYLYSYKLDDN-----GDET 1784
Query: 1071 GSY-----------ELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVG 1119
+ E D+ FN ++ + K K ADVVE+LIGA+L TGGE +
Sbjct: 1785 DIFPPVTDCSQFVSETFRDTHFN--YMFFDSKDKRVDKKTADVVESLIGAYLVTGGEKMA 1842
Query: 1120 LIFLDRIGIKVDFVNVPYQRQFQVHAERLVN--------VRHLESLLNYSFRDPSLLVEA 1171
F+ + + + + E LV + L++ L Y+F+ P L A
Sbjct: 1843 ARFVIMLN---NLYTMTVDSSPEFLEEDLVEPDPRTQSIIDELQNELEYTFKTPHLCRLA 1899
Query: 1172 LTHGSYMLPEIPR-CYQRLEFLGDAVLDYLITVYLYNKY-PGLSPGYLTDMRSASVNNDC 1229
L Y + P+ ++RLEFLGDAVLDYL+ LYN+ L G LTD++ + +N+
Sbjct: 1900 LAKKKYT--KDPKDNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLKQSITSNNL 1957
Query: 1230 YALSSVKHGLHKHILHASHELYKRIN--ITVDSFEKLSLGSTFG---------------W 1272
+ + GL + L + I+ ++ F+ L G W
Sbjct: 1958 FGSLAFCMGLPQSTLMKASAAKDHISCMYKLEQFKNLLNKPKHGVPLNPDLKRVLEKANW 2017
Query: 1273 ESVTS------------FPKALGDIIESLAGAIFVDSGCNR 1301
+ TS PK GD+ ES+ GA+++D CN+
Sbjct: 2018 NNKTSNRAGPYSSYLLDIPKWFGDVFESMFGAVWLD--CNQ 2056
>gi|145540581|ref|XP_001455980.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834199|emb|CAI44479.1| Dicer-like ribonuclease with helicase and Rnase III domains
[Paramecium tetraurelia]
gi|124423789|emb|CAK88583.1| unnamed protein product [Paramecium tetraurelia]
Length = 1797
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 179/412 (43%), Gaps = 81/412 (19%)
Query: 999 LETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESF 1058
LE LGD+ LK +S ++F + +E LL +++ RI+SN L K + I+ +F
Sbjct: 1327 LEFLGDANLKLLSSIEVFVQFPFANEHLLHLERARIVSNENLRKFSIIHRFFNCIKCTNF 1386
Query: 1059 D--PKMWIIPGDNSGSYELNDDS------------LFNGRKIYVTGR--KKVKSKTVADV 1102
D P +++ + E+ + NG I + + + K +DV
Sbjct: 1387 DYSPPEFLLDKNTQELSEIQPEKQKENKENTKYQYTQNGEVITELPKNYQPIPEKVHSDV 1446
Query: 1103 VEALIGAFLSTGGENVGL--IFLDRIGI-KVDFVNVPYQRQFQVHAERLV--NVRHLESL 1157
VEAL GAFL E++ FL RIG+ K V + + A+ L+ N+ LE++
Sbjct: 1447 VEALNGAFLIQYDEDINACQFFLHRIGVLKYPLAQVKLKNSTTLQAKGLLQKNLNSLENI 1506
Query: 1158 LNYSFRDPSLLVEALTHGSYM--------------------------------------- 1178
+ Y F D S+L++A+TH S++
Sbjct: 1507 IGYKFNDQSILIQAITHQSFLSVLDFYNYRKCKCNFVEFQNTKNILQISNLNQNDINESL 1566
Query: 1179 -------LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
I Y+RLEFLGD+VLD ++ +L ++ L + V N A
Sbjct: 1567 LTQLNQQQNRIDMSYERLEFLGDSVLDSVVVEWLVKEFNKEKVEDLALKKQCVVCNKALA 1626
Query: 1232 LSSVKHGLHKHILH-----ASHELYKRINITVDSFEKL--SLGSTFGWESVTSFPKALGD 1284
L ++ + L + +LH +HE ++ +N + + + + E + K LGD
Sbjct: 1627 LVTLHYKLDQFLLHPTLHKVAHENHQTLNKIKQMYNEYYDDISKMYTSEPII---KILGD 1683
Query: 1285 IIESLAGAIFVDSGCN----REVVFQSIRPLLEPMITPETMRFHPVRELTEY 1332
+ ES+ GAIFVDS N ++VVF+ + P ++ +P + +P L Y
Sbjct: 1684 VFESIVGAIFVDSSFNYDLTKQVVFKLLMPFMQHFTSPNQIIKNPQDRLFRY 1735
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 48/215 (22%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVA---VFLVPKVV 79
R+YQ++ + + ++N+I+FLETG GKT IA+M + Y K + F VFL +
Sbjct: 67 RDYQIDLFQKSKEKNSIIFLETGRGKTHIALM----HIYYYIKKNGFQNTKLVFLANTIQ 122
Query: 80 LVPQQAEAIK-------------------MHTDLKVGKYWG-----------------DM 103
LV QQ + I+ H DL++ K D
Sbjct: 123 LVEQQCQLIRDQIYSVAQEMEKKGLAPQDYHFDLQLFKDNSFKRKFIVPIHSKSILGIDE 182
Query: 104 GVDF--WDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQY 161
G+D W W + +++ VLVM Q+LL+ LR Y KL ++I DECHH +H Y
Sbjct: 183 GMDIQGWKKERWDDIINESCVLVMMGQMLLNALRRGYLKLPYFSLIIFDECHHCTQRHSY 242
Query: 162 ACIMTEFYH---RLLETGDSNLPRIFGMTASPIKS 193
I+ EF + S + G+TA+P+ S
Sbjct: 243 RLIIKEFLECEKVKKQIQHSEKVKFLGLTATPVTS 277
Score = 48.5 bits (114), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q E +++F+ N++V+T++ EEG DV +C+ V +F T+ FIQ GRAR + S +
Sbjct: 592 QKESIKKFKES-CNILVSTNVTEEGFDVPNCHYVFIFGEITTLKQFIQKIGRARAEGSVF 650
Query: 497 LLMV 500
++
Sbjct: 651 YFIL 654
>gi|440903247|gb|ELR53934.1| Putative ATP-dependent RNA helicase DHX58 [Bos grunniens mutus]
Length = 677
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 223/531 (41%), Gaps = 78/531 (14%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TGSGKT R+ AY+ R+ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKT-------RAAAYVARRHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E + + + GDMG A + +H++L+ T ++L L
Sbjct: 57 VHLVTQHCEEFSRMLERRWTITTLSGDMG----PRAGFGHVARRHDLLICTAELLQKALA 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +LN +L++DECHH Y I++++ L+ LP++ G+TASP
Sbjct: 113 SPEEEEHVELNAFSLLVVDECHHTHKDTVYNIILSQYLELKLQR-TRPLPQVLGLTASPG 171
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLS-NFIPFSTAKFKFYK--------- 241
S+ E H L+ N + S S S K Y
Sbjct: 172 TGGASTLEGAI---DHVLQLCANLDTWRIMSPKDHSPKLQEHSHQPCKQYDLCHRRTQDP 228
Query: 242 YDEIPHALYTHLADELAMIELKH---TRSLEN----LDLNEAQAELIRKKV-----SKIN 289
+ ++ L + D L M +L+ T++ E L + A+A L+ ++V + N
Sbjct: 229 FGDMLKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYN 288
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG----FGETIIKKFGSDASQALVT 345
LL + ++A + ++ DF+ E+ E + D L
Sbjct: 289 DALL-------IHDTVRAVDALNTLR-DFYNRERTTKTQILHAERWLLALFDDHKNELAH 340
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQ 404
SG E + K + +L + ++R + R IIF R +L
Sbjct: 341 LATSGPE-----NPKLEVLEAILQK----------QFRSPDSPRGIIFTRTRQSAHSLLL 385
Query: 405 SLLSELLPRHCTWKTKYIAG--NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
L + + + + + G NNS + Q E++++FR G +N++VATS+ EEGL
Sbjct: 386 WLQQQPGLQTVDIRPQVLTGAGNNSQKTQMIQMTQQEVIQKFRTGTLNLLVATSVAEEGL 445
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
D+ CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 446 DIPQCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAQGSRELQRELTN 496
>gi|156032684|ref|XP_001585179.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980]
gi|154699150|gb|EDN98888.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1867
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 145/569 (25%), Positives = 229/569 (40%), Gaps = 99/569 (17%)
Query: 865 RNNGSVTTYKKHYEERYGIQLCFDRE-PLLNGRRIFHVQNYLSKCRQQKQKEPSKISFEL 923
+NN ++ Y + + FD E P++ I +N L + + + P K L
Sbjct: 1274 KNNSNIMEYSCSLWAKARTRRTFDEEQPVVEATYISLRRNLLDEFDTGEVETPKKCFVIL 1333
Query: 924 PPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLE 983
P + ++P+S + +P+I+HR++S L+A+ ++L ++ I LE
Sbjct: 1334 EP----LKVSPLSTTVVAMAYLLPAIIHRVESYLIALEATDLL------HLDIRPDLALE 1383
Query: 984 AITTKKCQEDFH--------------LESLETLGDSFLKYAASQQLFKTYQNNHEGLLSV 1029
A+T + H E LE LGD FLK S L+ ++ E V
Sbjct: 1384 AVTKDSDNSEEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHV 1443
Query: 1030 KKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVT 1089
+ +I N L + +L FIR+ +F+ + W G L G+
Sbjct: 1444 DRMCLICNKNLFNTALKLELYRFIRSAAFNRRAWYPEGPE----------LLRGKTATAP 1493
Query: 1090 GRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPY 1137
K+ K++ADV EA+IGA L + E+ + R +V D+ +
Sbjct: 1494 NTHKLGDKSIADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDNHKAIVWSDYYKLYQ 1553
Query: 1138 QRQFQVH---AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLP--EIPRCYQRLEFL 1192
+ ++Q A ++ R +E+ Y F+ P LL A TH +Y +IP YQRLEFL
Sbjct: 1554 KPKYQTAVATAAQIDLARQVETKHPYHFKYPRLLRSASTHPAYPFSYEQIP-SYQRLEFL 1612
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
GDA+LD + + Y D+ A + A K
Sbjct: 1613 GDALLDMVQKMVA---------EYACDINEALIQAKADA--------------------K 1643
Query: 1253 RINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQ----SI 1308
R + D + + W +V PK L D++E+ GAIFVDS E V + I
Sbjct: 1644 RAGKSEDDY------APDYWITVRQPPKCLPDMVEAFIGAIFVDSEYKFEEVEKFFEMHI 1697
Query: 1309 RPLLEPMITPET-MRFHPVRELTEYCQKNHFSMK-KPVASRISG----KAAVTVEVQANG 1362
R + M +T HP LT + QKN PV+ + G K V V +
Sbjct: 1698 RWYFKDMSIYDTYANKHPTTFLTNFLQKNMGCEDWAPVSREMPGEDGRKNVVVCGVIVHN 1757
Query: 1363 RLFEHTFLDADKKTAKKVACKEVLKSLRA 1391
++ TF + AK A K+ L L
Sbjct: 1758 KVVS-TFQAESMRYAKVGAAKKALAQLEG 1785
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 135/304 (44%), Gaps = 52/304 (17%)
Query: 368 LTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
L+ K+V L+ L + ++ + +CI+FV TA +L SLLS K + G
Sbjct: 758 LSTKVVALLSILKDRFQRPTNDKCIVFVRERYTARLLASLLSTPEAGTPFLKVAPLVGTT 817
Query: 427 S---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
S G + + Q + +FR G +N ++ATS+ EEGLD+ CNLV+ FD TV +I
Sbjct: 818 STSAGEMHITFRSQTLTMHDFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYSTVIQYI 877
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL-----PCSPLNN 538
QSRGRAR NS Y MV+S + + + KEVL H L P +
Sbjct: 878 QSRGRARHVNSRYYHMVESHNEEQRRTI-----------KEVLKHEKLLKHFASALPEDR 926
Query: 539 HMYGEDF--------------YHVESTGTIATLSSSVSLIYFYCSRLPSD-------GYF 577
+ G +F Y V + T S++++ + LP Y
Sbjct: 927 KLTGNNFNMDYFLRKERTHRVYTVPGSNAKLTYRMSLTVLSAFVDSLPQAQDSALRVDYV 986
Query: 578 KPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALT 633
T +NK+ IC + LP PI+ I G T KQ +A E C LHQ G +
Sbjct: 987 VTT----VNKQF-ICEVILPEEAPIRGAI--GRPATTKQVAKCSAAFETCVILHQKGYID 1039
Query: 634 DNLL 637
LL
Sbjct: 1040 QFLL 1043
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLR 57
R+YQLE E A KQN I L+TGSGKT IA++LLR
Sbjct: 502 RDYQLELFEKAKKQNLIAVLDTGSGKTFIAVLLLR 536
Score = 41.6 bits (96), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 159 HQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVY 218
H YA I+ +FY + S LP+IFGMTASP+ ++ + + +LE L++S++
Sbjct: 561 HPYARIIKDFYRSDTDEPIS-LPKIFGMTASPVDAR-----DNIKKAAEELEGLLHSQIC 614
Query: 219 TCASESVLSNFIPFSTAKFKFY 240
T S++ I FY
Sbjct: 615 TAVDPSLMQYSIKGKPETIAFY 636
>gi|145489315|ref|XP_001430660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830695|emb|CAI39097.1| Dicer-like ribonuclease with mutated helicase and Rnase III domains
[Paramecium tetraurelia]
gi|124397759|emb|CAK63262.1| unnamed protein product [Paramecium tetraurelia]
Length = 1596
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 6 MESDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK 65
+E D T + + F R+YQ+E E + +N+I++LETG GKTL+ IML+ + L +
Sbjct: 96 LEEDDTIVDTIEEFEF-RDYQIELYEKGIGKNSIIYLETGLGKTLVIIMLM--WDRLFKY 152
Query: 66 PSPFVAVFLVPKVVLVPQQAEAIKM--------------------HTDLKVGKYWGDMGV 105
P + VFL V LV QQA+ IK K+ G
Sbjct: 153 PDKKI-VFLANTVQLVEQQAQQIKQKLPRVAELISDDDSMIVKAKEIGSKLNVLHGSKCT 211
Query: 106 DFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIM 165
D W+ W+ + + ++LVMT QI L+ LR K++ + +DECH+A H Y I+
Sbjct: 212 DIWNQIMWQIILEESKILVMTTQIFLNILRKGLVKISNFSFIAMDECHNAIQDHPYNYIL 271
Query: 166 TEFYHRL-LETGDSNLPRIFGMTASPIKSKVSSS 198
EFY + ++ + LP+I G TASP+ + S S
Sbjct: 272 KEFYLKTKFQSDNQFLPQIVGATASPVMNSKSVS 305
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
QN+I+ +FR+G + ++++TS+ EEG+D+ CN VI F+P + +++Q +GRAR +NS +
Sbjct: 612 QNDIINKFRQGKIKILISTSVAEEGIDIPMCNYVIGFNPISSSKAYVQMKGRARKENSQF 671
Query: 497 LLMVKSGDSTTQSRLENYLASGNK---------MRKEVLSHA--SLPCSPLNNHMYGEDF 545
++ + Q + + + K R+++L+ A +L N + D
Sbjct: 672 MIFMVDKLQQAQVQSHQQVQNNIKQIIEELTAPQRQQMLNKAMQTLQSKTYENTYF--DS 729
Query: 546 YHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMG--------ICTLYLP 597
+ +E +G + + S LI C + K PK+ I + G I L LP
Sbjct: 730 FEIEGSGALINTNWSCQLIQQLCQKFNQKDADKTQPKYAIYQLHGNAQTNQQFIAFLLLP 789
Query: 598 NNCPIQTVIAQGNI----KTLKQAACLEACKKLHQIGALTDNL 636
+++ I G + K K +A EA +L+Q G + DNL
Sbjct: 790 --ISMKSFIFYGKLAPSSKDAKASAAFEASVQLYQKGYIDDNL 830
>gi|358332039|dbj|GAA50765.1| endoribonuclease Dicer homolog 4 [Clonorchis sinensis]
Length = 1042
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 1146 ERL-VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
ERL V + L+++L Y F+D SLL+ ALTH S + YQRLEFLGDAVL Y+IT+Y
Sbjct: 787 ERLSVRLVGLQNILGYQFKDISLLIRALTHQSSPQTSLFGSYQRLEFLGDAVLGYVITIY 846
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH---ASHELYKRINITVDSF 1261
LY K+ PG LT+ RS V+N+ A + V+H LH +I+H A I +D+
Sbjct: 847 LYEKHVEFDPGQLTESRSNIVSNNSLACAIVEHQLHPYIIHNQPAFDTAVTFIQFILDTT 906
Query: 1262 EKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPE 1319
+S + V K L D+ E++ GAIFVD+ + V Q I LL+P I
Sbjct: 907 TSVSDQLELLNQEVLKGLRVKILADVFEAIVGAIFVDTKGSLSTVSQLIHRLLDPRIDDY 966
Query: 1320 TMR 1322
+R
Sbjct: 967 LLR 969
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK-TYQNNHEGLLSVKKERIISNAA 1039
++E++T ++ +LE LE LGDS L+ ++ ++ + + EG L+ ++ ++SN+
Sbjct: 573 LVESLTLLGARDAVNLERLELLGDSVLQLISTLTVYSGSPEGADEGQLTARRVDLVSNSN 632
Query: 1040 LCKLGCEQKLPGFIRTESFDP-KMWIIPG---DNSGSYELNDDSLFNGRKIYVTGRKKVK 1095
LC + + + + P +I P +S Y +D LF ++
Sbjct: 633 LCNIAVRLGWQNYCTGQVYSPPDHFIFPCYDLSSSVPYRDSDTRLF----------VRLT 682
Query: 1096 SKTVADVVEALIGAFLSTGGENVGLIFLDRIGI 1128
K++AD+VEA++G FL G L +GI
Sbjct: 683 DKSLADMVEAIVGCFLQHMGLPAAFRLLTYLGI 715
>gi|148231712|ref|NP_001085915.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Xenopus laevis]
gi|49256146|gb|AAH73528.1| MGC82787 protein [Xenopus laevis]
Length = 682
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 229/519 (44%), Gaps = 43/519 (8%)
Query: 24 NYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
+YQ E + AL+ +N I++L TG+GKT A+ + + + R +V KV LV
Sbjct: 5 DYQWEVIGPALEGKNIIIWLPTGAGKTRAALYVAMRHLEMKRNAK---VCLMVNKVHLVD 61
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS----Y 138
Q + + H LK + D + E + ++V++ T QIL + L S +
Sbjct: 62 QHF-SNEFHPHLKDKYKVVAISGDTEHKCFFAELVQNNDVIICTAQILQNALSSSSEEIH 120
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+L +LI+DECHH Y +M + R + T LP+I G+TASP + +S
Sbjct: 121 VELTDFTLLIIDECHHTHKDGVYNKLMEGYLERKI-TQKGKLPQILGLTASPGTGRATSF 179
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
E+ + H L+ N + S V + + AK +YD + D+L
Sbjct: 180 EK---AEEHILQICANLDTWRIMSAEVHREDLE-AKAKQPNKQYDLVTERPRDPFGDKLK 235
Query: 259 MIELKHTRSLENLDLNEAQ--AELIRKKVSKINSTLLYCLSELGVWLAL---KAAETISC 313
+ L D E+ +L +KV ++ + + AL K +++
Sbjct: 236 ELMKTIHEYLRTTDFCESDFGTQLYEQKVVELEKEGAVEANRMKRTCALHLRKYNDSLLV 295
Query: 314 YESDFF--AWEQLDGF--GETIIKKFGSDASQALVTYVPSGAE---WSIGDDSKFNLDSG 366
+++ A+E LD + E +I+K +D + A + + G + D +F
Sbjct: 296 HDTVRMMDAYELLDDYYQQEKVIRK-QNDPTDAFLIQLFDGNRARLLELAQDVRFE---- 350
Query: 367 LLTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW----KTKY 421
K+ L E L +++ R IIF T SL + + +H KT
Sbjct: 351 --NPKLRKLEEILRDQFQFSSGSRGIIFTR---TRQSTHSLHNWISSKHSFQIMGVKTAP 405
Query: 422 IAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
+ G Q + ++ +Q E +E FR+G +N++++TS+ EEGLD+ CN+V+ +
Sbjct: 406 LTGAGYSNQSKHMTQNEQRETIEMFRKGQLNLLISTSVAEEGLDIPQCNIVVRYGLMTNE 465
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASG 518
S +Q+RGRAR ++S Y + K G + N G
Sbjct: 466 ISMVQARGRARHEDSCYSFLAKIGGKEIRREETNETLEG 504
>gi|222615621|gb|EEE51753.1| hypothetical protein OsJ_33185 [Oryza sativa Japonica Group]
Length = 726
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 223/515 (43%), Gaps = 77/515 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ + +E AL NT+V L TG GKT IA +++ Y Y P + VF P LV
Sbjct: 249 REYQKKFVEKALFTNTLVALPTGLGKTFIAAVVM--YNYFRWFPEGKI-VFTAPTRPLVT 305
Query: 83 QQAEAIKMHTDLKVGKYW-----GDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDG 133
QQ EA H + + + W G++ FW V +TPQ+L +
Sbjct: 306 QQIEAC--HNTVGIPQEWTIDLKGNLSPSKRSCFW---------KSKRVFFVTPQVLQND 354
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
++ +N + L++DE H A + Y ++ E LE L RI +TA+P
Sbjct: 355 IQSGICMVNQLVCLVIDEAHRASRNYAYCVVVRE-----LEAARVPL-RILALTATP--- 405
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTC-ASESVLSNFIPFSTAK--------FKFYKYDE 244
S+Q Q + + L S++ C S+ +S +I T + KF +
Sbjct: 406 ---GSKQPAIQNV--INNLRISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGD 460
Query: 245 IPHALYTHLADELA--MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L D + +++L+ R +++ D + +R K + +
Sbjct: 461 EAEQVNDKLLDVIRPHLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQA-----PPPNIP 515
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF- 361
LA K IS F A L G + ++ A Q++ G+ + ++ F
Sbjct: 516 LADKKEIGIS-----FQALTLLYGIMKMLLSYGIKAAHQSIEAKYKEGSWKVLTRNNTFL 570
Query: 362 --------NLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSEL 410
L G+L+ K+ L+E LL++ + +D R IIF R +L SL +
Sbjct: 571 EVKKTMENFLSQGILSPKVRTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRN-- 628
Query: 411 LPRHCTWKTKYIAGNNSGIQC--QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
+ +I +++G Q Q++K Q I+ +FR G N++VATSI EEGLD+ +
Sbjct: 629 IDGELVRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVD 688
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNS---DYLLMV 500
LV+ FD + + IQ GR +N D L +V
Sbjct: 689 LVVCFDANISALRMIQRMGRTGRKNEGRVDILFLV 723
>gi|449459586|ref|XP_004147527.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 353
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 7/184 (3%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +L+Y F++ LL EALTH SY+ Y RLEF+GD+ + I+ Y + YP L+
Sbjct: 24 IERILSYKFKNKKLLEEALTHSSYLNSP---SYDRLEFIGDSAIGLAISTYFFPLYPDLN 80
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
G LT +R+A+V+ + A +V H L+ ++ + +L + D+ +G
Sbjct: 81 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG-- 138
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTE 1331
+ PK L DI+ES+AGAI+VD + + ++ I+ L+P+ TPE ++ PV L E
Sbjct: 139 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFE 198
Query: 1332 YCQK 1335
CQK
Sbjct: 199 DCQK 202
>gi|171689324|ref|XP_001909602.1| hypothetical protein [Podospora anserina S mat+]
gi|170944624|emb|CAP70735.1| unnamed protein product [Podospora anserina S mat+]
Length = 1406
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 966 LLDHCMQNVTIPTIK-VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHE 1024
LLD +Q I + V+ AIT + E +E LGDS LK+ T + +
Sbjct: 898 LLDGSLQTTGITGLDLVVTAITASGARRSIDYERIEFLGDSILKFCT------TINCSAQ 951
Query: 1025 GLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGR 1084
LS K++I+SN LCK + L +I ++ W P E D+ +G
Sbjct: 952 CFLSASKDKIVSNYRLCKAAIDFGLARYIINTAYTTDKWR-PVFVEDYLERTDNPSSDGP 1010
Query: 1085 KIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQF--- 1141
K +++ +KT+ADVVEALIGA +GG N L + + + ++ + RQ
Sbjct: 1011 KT-----REMSTKTLADVVEALIGASHISGGINKALACISLFLPEAKWQSIDHGRQVLYD 1065
Query: 1142 -QVHAERLV-NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1199
E L N+ LE L+ Y+F+ SLL+EA+TH S+ + + RLEFLGDA+LDY
Sbjct: 1066 EAPDDEPLPPNMHLLEKLIGYTFKKKSLLIEAMTHPSFNVQDTRASLDRLEFLGDAILDY 1125
Query: 1200 LITVYLYNKYPGLSPGYLTD-----MRSASVNND 1228
L+ L++ L+ L + +R+A VN D
Sbjct: 1126 LVVESLFSLREPLTGLPLENSKLHLLRTALVNAD 1159
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 140/306 (45%), Gaps = 50/306 (16%)
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY------ 421
L+ K+ L++ L ++G + + ER T S+LS +L H +++Y
Sbjct: 341 LSRKVQALLQILASHKG-NPVGIVFVTERATT-----SVLSHVLSVHPVLESRYSVESMV 394
Query: 422 ----IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ G + K+ E + FR+G VN++VATS+LEEG+DV CNLVI FD
Sbjct: 395 GTSKLPGGKHSFLDLTTKEDIESLHRFRKGKVNLLVATSVLEEGIDVPVCNLVICFDKPS 454
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMR-------KEVLSHAS 530
+ SFIQ RGRARM S+ ++ K D QS LE + +M+ +E+
Sbjct: 455 NLKSFIQRRGRARMNESELWVLFK--DDQDQS-LEEWKELEQEMKRKYEDELREIAGLEQ 511
Query: 531 LPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHIN---- 586
+ S +++ D +TG T+ + + +CS L + + P + I+
Sbjct: 512 MEQSEADDYPKMTD----PTTGAQMTIHDAKQHLDHFCSTLSTRKFVNWAPFYIIHDLEG 567
Query: 587 -----KEMGICTLYLPNNCPIQTVIAQGNIKTLK---------QAACLEACKKLHQIGAL 632
++ G+ + N P+ + ++L+ + A +A KKL++ G +
Sbjct: 568 NPIDARKPGLRAATV--NLPVSLSPSLRRAESLRAWPSEAFACKDAAFQAYKKLYEAGLI 625
Query: 633 TDNLLP 638
N+LP
Sbjct: 626 DKNMLP 631
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ+E + +L++N IV ++TGSGKT + +LR L R SP + FL P V L
Sbjct: 6 ARAYQVEMFQESLQRNIIVAMDTGSGKTQVR-AILRIQEELGR--SPKLIWFLAPTVQLA 62
Query: 82 PQQAEAIKMHTDLKVGKYW-GDMGVDFWDGAT--WKEEMSKHEVLVMTPQILLD-GLRLS 137
QQ E I+ ++ G V W T W+ ++ ++V T QIL D + +
Sbjct: 63 AQQFEVIEKQIPGVQSRFICGADNVQAWKYKTGVWQAVLTNVRIVVSTYQILFDAAVAHA 122
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ L I +L++DE G+ + +T +P I G+TASP+
Sbjct: 123 FVPLESISLLVIDE-----GEFSLSISLT--------MEGKPVPHILGLTASPL 163
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 1186 YQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILH 1245
Y+R+EFLGD++L + T+ + +L+ + V+N +++ GL ++I++
Sbjct: 929 YERIEFLGDSILKFCTTINCSAQC------FLSASKDKIVSNYRLCKAAIDFGLARYIIN 982
Query: 1246 ASHELYKRINITV-DSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
++ K + V D E+ S+ G ++ K L D++E+L GA + G N+
Sbjct: 983 TAYTTDKWRPVFVEDYLERTDNPSSDGPKTREMSTKTLADVVEALIGASHISGGINK 1039
>gi|339261112|ref|XP_003368069.1| conserved hypothetical protein [Trichinella spiralis]
gi|316963063|gb|EFV48890.1| conserved hypothetical protein [Trichinella spiralis]
Length = 654
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 158/332 (47%), Gaps = 60/332 (18%)
Query: 402 VLQSLLSELLPRHCTW-KTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSIL 458
+L +L PR ++ + Y+ G+ + S +Q E+++ FR G +N++ ATSIL
Sbjct: 126 ILIDTAKKLQPRSYSYLEVDYVVGSRMSAEVAEPSFARQEEVLKNFRHGKLNLLAATSIL 185
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK----------------- 501
EEG+DV+ CN VI FD T SF+QS+GRAR + + Y ++V+
Sbjct: 186 EEGIDVRHCNYVIRFDTPLTFRSFVQSKGRARQKIAYYTILVQDRFLKSFQEMLNSFVET 245
Query: 502 ------SGD-----STTQSRLENYLASGNKM---RKEVLSHASLPCSPLNNHMYGEDFY- 546
+G + T+ R +Y + +++ RKEV +LP +++ + E +Y
Sbjct: 246 EKFLKVNGRDLNILTRTKDRDRSYSGNNDQVDNCRKEV----NLPNGDVDSLV--EPYYT 299
Query: 547 HVESTGTIA-----TLSSSVSLIYFYCSRLPSDGYFKPTPKFHI----NKEMGI---CTL 594
+ E G + LSS+ ++I YC++L D + +PKF + NK++ I T+
Sbjct: 300 YFEENGLVKKAACLVLSSAHNVIKRYCNKLRKDRFADSSPKFSVQTILNKDLSISYVATV 359
Query: 595 YLPNNCPIQTVI---AQGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRG 651
LP P++ I N K + AA E K LH +G L + L+P + V K K
Sbjct: 360 QLPTTSPLKKKIEGKPMQNAKLAEMAAAFETAKMLHAMGELNEFLIPPVTVRKEIELKED 419
Query: 652 NEPYNAEHPIYF----PPELVNQSPQDTKITY 679
+ ++ Y+ P L P+ + +Y
Sbjct: 420 EQFFSISSRSYYLKEVPDALYKAIPRADQKSY 451
>gi|340975794|gb|EGS22909.1| hypothetical protein CTHT_0013870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1660
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 183/454 (40%), Gaps = 91/454 (20%)
Query: 927 LCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAIT 986
L ++M + + +P+++ L LLA +L L V+ A+
Sbjct: 1094 LREVVMDAVPAKYAEAALMIPALLVVLGDHLLARDLLTERLREKTGMGGDDLGNVVRALW 1153
Query: 987 TKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCE 1046
Q E++E LGD+ LK+ + Y EG LS K+RI+SN +
Sbjct: 1154 ASGAQRPGDYENMEFLGDALLKFLTTVNCEAKYLTYPEGFLSPIKDRIVSNMRFFRAAVG 1213
Query: 1047 QKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEAL 1106
L +I K W P +S GR VT +++ +KTVADVVEAL
Sbjct: 1214 FGLDRYIIDAKMVQKRWRPPTISS----------ILGRPPSVTAPRQLSTKTVADVVEAL 1263
Query: 1107 IGAFLSTGGENVGL----IFLDRIGIKVDFVNVPYQRQF---QVHAERLV--NVRHL-ES 1156
+GA +GG + L +FL + +D++ V R A+ + +R + E
Sbjct: 1264 VGAAYLSGGTDRALTCVPLFLP--DVPIDWLPVGRCRDILFNHAAADDPLPKTMRRIEEQ 1321
Query: 1157 LLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITVYLYNKYP----- 1210
LL Y F+ SLLVEALTH S P + RLE LGDA+LD+L+ LY Y
Sbjct: 1322 LLGYEFKKKSLLVEALTHSSCPAGPGVRGSLDRLELLGDALLDFLVATKLYELYKCNVDG 1381
Query: 1211 ---GLSPGYLTDMRSASVNNDCYAL----------------------------SSVKHGL 1239
+ P L M+SA VN D A+ +++ G
Sbjct: 1382 QQQMVVPYILHIMKSALVNQDIMAVLILEEWTILQEELDIIAPPSPSSSQGSETAISEGN 1441
Query: 1240 HKH------------------ILHASHELYKRINITVDSF--------EKLSLGSTFGWE 1273
+H + H + +L + +N T + L+ G + W
Sbjct: 1442 GEHSGGVTLRTRHVRVPLTAFLRHNTIQLSRFMNDTTRRYAAMRHEVQHALTHGDRYPWR 1501
Query: 1274 SVTSF--PKALGDIIESLAGAIFVDSG----CNR 1301
++ PK D+ E++ A++VDSG C R
Sbjct: 1502 LISQLRAPKVFSDVFEAVLAAVWVDSGDMDVCRR 1535
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE LE +LKQN IV ++TGSGKT +AI+ ++ Y L + S V FL P V L
Sbjct: 199 RAYQLEMLEESLKQNVIVAMDTGSGKTQVAILRIQ---YELER-SDKVVWFLAPTVPLCH 254
Query: 83 QQAEAIKMHTDLKVGKYW-GDMGVDFWDG--ATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ I+ + GD ++ W W + V+V T QIL D + +
Sbjct: 255 QQHVVIQTQLPAVTTRLICGDDDIETWSAIPGVWDGVLKHTRVIVSTYQILFDAVAHALV 314
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
L+ + ++++DE HH + + +M E Y L G + +P + G+TASP+
Sbjct: 315 PLSALSLIVIDEAHHCIKMNPVSRVMKEHYAPLKAKG-AQVPAVLGLTASPV 365
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 49/317 (15%)
Query: 368 LTEKIVCLIESLLEYRGVEDIR---CIIFVERVITAIVLQSLLSELLPRHC--------T 416
L+ KI+ L++ L + + R IIFV TA VL +LS + PR
Sbjct: 557 LSPKILALLDVLESFAKDDPSRKPVGIIFVRERATAAVLSHILS-IHPRTAPHYRVACMV 615
Query: 417 WKTKYIAGNNSGIQCQSRKKQNEIVEE-----------FRRGLVNVIVATSILEEGLDVQ 465
T + G+ G + R++ +++++ FR+G VN++VATS+LEEG+DV
Sbjct: 616 GGTTRVPGSGGGSRSNKRREYIDLIKKGKDDGLEALQAFRQGEVNLVVATSVLEEGIDVP 675
Query: 466 SCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT---QSRLENYLASGNKMR 522
+CNLV+ FD + SFIQ RGRARM S +LMV G+ + E + MR
Sbjct: 676 ACNLVVCFDVPENLKSFIQRRGRARMGVSKLVLMVPEGEQAKGWDEREREMKEMYEDDMR 735
Query: 523 KEVLSHASLPCSPLNNHMYGEDFYHV---ESTGTIATLSSSVSLIYFYCSRLPS--DGYF 577
V+ + + ED Y V TG TL + + + +C L S +
Sbjct: 736 --VVRIVEEIENGIVVETEKEDEYPVLRDPETGAQVTLHDAKAHLEHFCGTLRSSTSAFT 793
Query: 578 KPTPKFHINKEMG-----------ICTLYLPNNCPIQTVIAQGNIKTLKQA-----ACLE 621
+ P + ++ E G T++LP P + +G L +A A +
Sbjct: 794 ELRPFYILHGEHGQSVNTFAPVPLRATVHLPVVLPPELRRIEGIRSWLSEADACRDAAFQ 853
Query: 622 ACKKLHQIGALTDNLLP 638
A +KL++ G + +LLP
Sbjct: 854 AYQKLYEAGLVGKHLLP 870
>gi|218185362|gb|EEC67789.1| hypothetical protein OsI_35346 [Oryza sativa Indica Group]
Length = 648
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 223/515 (43%), Gaps = 77/515 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ + +E AL NT+V L TG GKT IA +++ Y Y P + VF P LV
Sbjct: 171 REYQKKFVEKALFTNTLVALPTGLGKTFIAAVVM--YNYFRWFPEGKI-VFTAPTRPLVT 227
Query: 83 QQAEAIKMHTDLKVGKYW-----GDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDG 133
QQ EA H + + + W G++ FW V +TPQ+L +
Sbjct: 228 QQIEAC--HNTVGIPQEWTIDLKGNLSPSKRSCFW---------KSKRVFFVTPQVLQND 276
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
++ +N + L++DE H A + Y ++ E LE L RI +TA+P
Sbjct: 277 IQSGICMVNQLVCLVIDEAHRASRNYAYCVVVRE-----LEAARVPL-RILALTATP--- 327
Query: 194 KVSSSEQDYWQKIHDLETLMNSKVYTC-ASESVLSNFIPFSTAK--------FKFYKYDE 244
S+Q Q + + L S++ C S+ +S +I T + KF +
Sbjct: 328 ---GSKQPAIQNV--INNLRISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGD 382
Query: 245 IPHALYTHLADELA--MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+ L D + +++L+ R +++ D + +R K + +
Sbjct: 383 EAEQVNDKLLDVIRPHLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQA-----PPPNIP 437
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKF- 361
LA K IS F A L G + ++ A Q++ G+ + ++ F
Sbjct: 438 LADKKEIGIS-----FQALTLLYGIMKMLLSYGIKAAHQSIEAKYKEGSWKVLTRNNTFL 492
Query: 362 --------NLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSEL 410
L G+L+ K+ L+E LL++ + +D R IIF R +L SL +
Sbjct: 493 EVKKTMENFLSQGILSPKVRTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRN-- 550
Query: 411 LPRHCTWKTKYIAGNNSGIQC--QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
+ +I +++G Q Q++K Q I+ +FR G N++VATSI EEGLD+ +
Sbjct: 551 IDGELVRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVD 610
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNS---DYLLMV 500
LV+ FD + + IQ GR +N D L +V
Sbjct: 611 LVVCFDANISALRMIQRMGRTGRKNEGRVDILFLV 645
>gi|383319514|ref|YP_005380355.1| ERCC4-like helicase [Methanocella conradii HZ254]
gi|379320884|gb|AFC99836.1| ERCC4-like helicase [Methanocella conradii HZ254]
Length = 765
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 215/483 (44%), Gaps = 54/483 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLL-----RSYAYLLRKPSPFV---AVF 73
+R YQL NAL++++++ L TG GKT+IA++++ + A +L P V A F
Sbjct: 32 SRAYQLTLARNALEKSSLIVLPTGLGKTIIALLVMLERLEKGKALMLSPTKPLVEQHAAF 91
Query: 74 LVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
L + + +P+Q G VD W G+ ++V TPQ++ +
Sbjct: 92 L-KRTLTIPEQVAVF-------TGSVAPSKRVDIWKGS---------RIIVSTPQVIEND 134
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP--I 191
L F L + +++ DE H A G + Y I ++ + S P + G+TASP
Sbjct: 135 LLTKRFDLKDVSLIVFDEAHRATGDYAYVYIAKKYVEQ------SANPLVLGITASPGST 188
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKV----YTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
K++ +Q+ + + +++T + V Y E V N +P A+ K +
Sbjct: 189 PEKINEVKQNLFIERVEIKTEKDPDVAPYIYEKDVEWVRVN-VPDKAAEIKI-----LLD 242
Query: 248 ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY-CLSELGVWLALK 306
+L D L + + L +L Q E ++ +S+ S Y +S L + ++
Sbjct: 243 SLMDDRMDRLKALGVVRESRLTKKELLMLQ-EKLQADISRGGSPESYRAVSILAEIMKIE 301
Query: 307 AAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
A + + + + + K GS A++ L+ I D + +
Sbjct: 302 HAVDLIQTQGVVPLKKYFERLKDEAGSKGGSKATKRLMQDARLAGAMRIADTAD---EVN 358
Query: 367 LLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP-RHCTWKTKYIAGN 425
TEK+ ++ L + R R I+F TA + L+++ R + + N
Sbjct: 359 PKTEKVKEIV--LEQIRENPSSRIIVFTNFRDTADFVSKELAKVEGIRPVRFVGQASKLN 416
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
+ G+ ++K+Q EI+ FR G N ++ATS+ EEGLD+ S +LVI ++P + IQ
Sbjct: 417 DKGL---TQKRQVEILNAFRSGEFNTLIATSVAEEGLDIPSTDLVIFYEPVPSEIRTIQR 473
Query: 486 RGR 488
RGR
Sbjct: 474 RGR 476
>gi|449526605|ref|XP_004170304.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 339
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +L+Y F++ LL EALTH SY+ Y RLEF+GD+ + I+ Y + YP L+
Sbjct: 10 IERILSYKFKNKKLLEEALTHSSYLNSP---SYDRLEFIGDSAIGLAISTYFFPLYPDLN 66
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
G LT +R+A+V+ + A +V H L+ ++ + +L + D+ +G
Sbjct: 67 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG-- 124
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF--HPVRELTE 1331
+ PK L DI+ES+AGAI+VD + + ++ I+ L+P+ TPE + PV L E
Sbjct: 125 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFE 184
Query: 1332 YCQK 1335
CQK
Sbjct: 185 DCQK 188
>gi|296202916|ref|XP_002748669.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 1
[Callithrix jacchus]
Length = 678
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 138/535 (25%), Positives = 228/535 (42%), Gaps = 86/535 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TG+GKT R+ AY+ R+ V V LV +
Sbjct: 4 RPYQQEVITPALEGKNIIIWLPTGAGKT-------RAAAYVARQHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E D + + GDMG A + H++L+ T ++L L
Sbjct: 57 VHLVTQHGEEFSRMLDGRWTMTTLSGDMG----PRAAFGHLARCHDLLICTAKLLQMALT 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +L ++++DECHH Y IM+++ L+ LP++ G+TASP
Sbjct: 113 SPEEEEHVELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARP-LPQVLGLTASPG 171
Query: 192 ---KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDE 244
SK+ + Q +L+T + C + N P + + +
Sbjct: 172 TGGASKLDGAINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCKQYDLCQRRSQDPFGD 231
Query: 245 IPHALYTHLADELAMIEL-----KHTRSLENLDLNE--AQAELIRKKV-----SKINSTL 292
+ L + D L M EL K T + + L+E A A L+ ++V + N L
Sbjct: 232 LLKKLMDQIHDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVYALHLRRYNDAL 291
Query: 293 LYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAE 352
L + ++A + ++ + +F+ E A T +
Sbjct: 292 L-------IHDTVRAVDALAALQ-NFYQREH------------------ATKTQILCAER 325
Query: 353 WSIG-----DDSKFNLDSGLLTEKIVCLIESLLE--YRGVEDIRCIIFVERVITAIVLQS 405
W + D +L + L + ++E +L+ +R + R IIF +A S
Sbjct: 326 WLLALFNDHKDMLAHLATHGLENPKLEMLEKILQKQFRSSDSPRGIIFTRTRQSA---HS 382
Query: 406 LLSELLPRHCTWKTKYI-------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
LL L + +T I +GN+S ++K Q E++ +FR G +N++VATS+
Sbjct: 383 LLL-WLQQQPGLQTVDIRPQLLIGSGNSSQRTHMTQKDQQEVIRKFRDGTLNLLVATSVA 441
Query: 459 EEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
EEGLD+ CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 442 EEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGESVYSFVATKGSRELQRELIN 496
>gi|395826380|ref|XP_003786396.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 1
[Otolemur garnettii]
Length = 678
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 228/543 (41%), Gaps = 102/543 (18%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TG+GKT R+ AY+ ++ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKT-------RAAAYVAKRHLETVDRAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLKVGKYW-----GDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
V LV Q E + D G++ GDMG A + H++L+ T ++L
Sbjct: 57 VHLVTQHGEEFRRMLD---GRWSMVTLSGDMG----SRAGFGHLARSHDLLICTAELLQT 109
Query: 133 GL----RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+ + +L +L++DECHH Y I++ + L+ S LP++ G+TA
Sbjct: 110 AMTSPEEEEHVELTAFSLLVVDECHHTHKDTVYNVILSRYLEHKLQRAPS-LPQVLGLTA 168
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP-- 246
SP S L+ +N + CA+ P S+ + ++Y++ P
Sbjct: 169 SPGTGGASK-----------LDGAINHILQLCANLDTWCIMSPQSSCS-QLHEYNQQPCK 216
Query: 247 -----------------HALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIR 282
L + D L M EL + + + +L + A+ L
Sbjct: 217 QYDICHRRSQDPFGDLLKKLMDQVHDRLDMPELSRDFGMQIYEQQMVDLSRDAAENGLQE 276
Query: 283 KKV-----SKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG----FGETIIK 333
++V + N LL + ++A + ++ + DF+ E+ + E +
Sbjct: 277 RRVYALHLRRYNDALL-------IHDTVRAVDALATLQ-DFYNRERTTKTQVLYAERWLL 328
Query: 334 KFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIF 393
D AL G E + K + +L E ++ R IIF
Sbjct: 329 ALFDDNKNALAHLATHGPE-----NPKLEVLERILQE----------QFGKPNSPRGIIF 373
Query: 394 VE-RVITAIVLQSLLSELLPRHCTWKTKYIAGN-NSGIQCQ-SRKKQNEIVEEFRRGLVN 450
R +L L + + K + + G+ NSG + +++ Q E++++FR G++N
Sbjct: 374 TRTRQSAHSLLLWLQQQPGLQMVDIKAQMLIGSRNSGQRAHMTQRNQQEVIQKFRIGILN 433
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
++V+TS+ EEG+D+ CN+V+ + S +Q+RGRAR S Y + G +
Sbjct: 434 LLVSTSVAEEGMDIPHCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAEGSRELRRE 493
Query: 511 LEN 513
L N
Sbjct: 494 LIN 496
>gi|195996287|ref|XP_002108012.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
gi|190588788|gb|EDV28810.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
Length = 915
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 181/415 (43%), Gaps = 43/415 (10%)
Query: 932 MAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQ 991
+ PIS+S P RL L N +L +V++ +L+A+T+
Sbjct: 430 IVPISVSK----RLFPKFHRRLLHSKLKSNRNKAVLKRPGPSVSM----LLQALTSLSAD 481
Query: 992 EDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPG 1051
+ F+ E LE LGDS+LK+ + F N EG +S+ + +SN+ L + + L
Sbjct: 482 DFFNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTL 541
Query: 1052 FIRTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEAL 1106
+ F K W+ PG N+ + N+ ++ K+V S K ++D VE L
Sbjct: 542 YQFNTPFKLKQWLPPGFTCIRNNANLVANNMLTDGSKQRDSESFKQVMSVKNISDTVEGL 601
Query: 1107 IGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLE------SLLNY 1160
+G + G L IG+ +D NV ++ V+ E ++ +Y
Sbjct: 602 VGVYSLASGPVDAARLLPWIGLDID-PNVLIEKDKSVNFEIPTTDEDIQLSSCILRNTDY 660
Query: 1161 SFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
F + L A TH S YQRLE+LGDA+L+YL+ ++Y + P PG ++
Sbjct: 661 QFNNFYWLRIAFTHSSVA----SENYQRLEYLGDAILEYLLIEFVYCRKPYFGPGKISHF 716
Query: 1221 RSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG------------- 1267
+S N ++L ++ + HI +L I ++ +F+++ L
Sbjct: 717 KSVMTRNQTFSLIAIAFQFYTHI-RCHSKLKLDIMDSIQNFKEILLDNHQDDHQPDIGHF 775
Query: 1268 STFGWESVTS-----FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMIT 1317
+ ++ TS PK D+ E+ AI++D G V++ + +++ ++
Sbjct: 776 ANLAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYKMVQRILA 830
>gi|15242329|ref|NP_199328.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
gi|75171238|sp|Q9FKF0.1|RTL3_ARATH RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3; AltName: Full=Ribonuclease three-like
protein 3
gi|9759600|dbj|BAB11388.1| unnamed protein product [Arabidopsis thaliana]
gi|332007827|gb|AED95210.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
Length = 957
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 99/176 (56%), Gaps = 9/176 (5%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E +LNYSF + +LL EA+T S + + RLEF GD++L+ T Y+ + Y
Sbjct: 3 SVEAVEKILNYSFVNKTLLKEAITQKSPL-------FDRLEFFGDSILEVAFTNYICHTY 55
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P L L D+R+A+V+N+ +A +V H LH +L + L+K++ ++ K
Sbjct: 56 PNLKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVP 115
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHP 1325
+G + PK L D +ES+A +F+D + + +++ R LLEP+ TP+ + P
Sbjct: 116 YG--GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQP 169
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E +LNYSF + +LL E LTH + L +Q L F+G++ L T +LY Y
Sbjct: 414 SVEAVEKILNYSFVNKTLLKELLTHNNSPL------FQGLMFVGESALSLAFTKHLYLTY 467
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P L P L+ +R A+ +D YA +VK G+++ + + + K +T D E +G
Sbjct: 468 PMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGS---VPKPEKMTTDFIE--LMGKE 522
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFH 1324
V PK L +++ +AGA+++D N + + + R LLEP+ T + +R
Sbjct: 523 DDPYRVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQ 577
>gi|448475812|ref|ZP_21603167.1| Hef nuclease [Halorubrum aidingense JCM 13560]
gi|445816030|gb|EMA65939.1| Hef nuclease [Halorubrum aidingense JCM 13560]
Length = 825
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 218/511 (42%), Gaps = 68/511 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL+ + A +T+V L TG GKT +++++ + + A+FL P LV
Sbjct: 21 RRYQLQLADAAADDHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 83 QQA----EAIKMHTDLKVGKYWGDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q A EA+ + D ++ + GD+ D WD A +++ TPQ++ + L
Sbjct: 77 QHADFYREALSIPAD-EIVVFTGDVKPDDRAAVWDDA---------RIVIATPQVVENDL 126
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ L + L DECH A G + Y I E YH D+ P + GM+ASP
Sbjct: 127 VGNRISLRDVTHLTFDECHRATGDYAYVYI-AERYH-----ADAADPLVTGMSASP---- 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKY-DE---IPHALY 250
+ + Q + + L N +V T A V + + +++ DE I AL
Sbjct: 177 --GGDTEEIQTVCENLGLRNVEVMTEADADV-DEYTHDTDVRWEQVTLPDEVIVIRDALN 233
Query: 251 THLADELAMIEL-----KHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL 305
+ D L ++ K + L DLNE + +L +K + S +S + L
Sbjct: 234 EVITDRLEKLKSLGVTNKTSPDLSQRDLNEMRGKL-KKMMDNDQSDGYKGMSTHAEVMKL 292
Query: 306 KAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT-----YVPSGAEWSIGDDSK 360
+ A + +S + E S ASQ +V AE G K
Sbjct: 293 RRATELVETQSVESVRRYFERQREAARSSGASKASQRMVADPKVREAMRKAESFDGLHPK 352
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWKT 419
F+ LL E + G+ D R I+F E TA L LS
Sbjct: 353 FSKARILLAETL-----------GINDGERAILFTESRDTAEALVEFLSTSFAVR----- 396
Query: 420 KYIA-GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRT 478
K++ G+ G S+K+Q E ++EF+ G V+V+TS+ EEGLDV +LV ++P T
Sbjct: 397 KFVGQGDKEGSDGMSQKQQQETLDEFKAGAFEVLVSTSVAEEGLDVPEVDLVCFYEPVPT 456
Query: 479 VCSFIQSRGRARMQNSDYLLMVKSGDSTTQS 509
IQ +GR Q ++++ + D+ ++
Sbjct: 457 AIRSIQRKGRTGRQAEGQVVVLMAEDTRDEA 487
>gi|403304470|ref|XP_003942819.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 1
[Saimiri boliviensis boliviensis]
Length = 678
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 230/543 (42%), Gaps = 102/543 (18%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TG+GKT R+ AY+ R+ V V LV +
Sbjct: 4 RPYQREVITPALEGKNIIIWLPTGAGKT-------RAAAYVARQHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E D + + GD+G A + H++L+ T Q+L L
Sbjct: 57 VHLVTQHGEEFSRMLDGRWTMTTLSGDVG----PRAGFGHLARCHDLLICTAQLLQMALT 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +L ++++DECHH Y IM+ + L+ LP++ G+TASP
Sbjct: 113 SPEEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARP-LPQVLGLTASPG 171
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVL-----SNFIP----FSTAKFKFYK- 241
S L+ +N + CA+ N+ P S K Y
Sbjct: 172 TGGASK-----------LDGAINHVLQLCANLDTWCIMSPQNYFPQLQEHSQQPCKQYDL 220
Query: 242 --------YDEIPHALYTHLADELAMIEL-----KHTRSLENLDLNE--AQAELIRKKV- 285
+ ++ L + D L M EL K T + + L+E A A L+ ++V
Sbjct: 221 CQRRSQDPFGDLLKKLMDQIHDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVY 280
Query: 286 ----SKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQ 341
+ N LL + ++A + ++ +S F+ E
Sbjct: 281 ALHLRRYNDALL-------IHDTVRAVDALAALQS-FYQREH------------------ 314
Query: 342 ALVTYVPSGAEW--SIGDDSKFNLDSGLLTEKI----VCLIESLLE--YRGVEDIRCIIF 393
A T + W ++ +D K N+ + L T + + ++E +L+ +R + R IIF
Sbjct: 315 ATKTQILCAERWLLALFNDHK-NVLAHLATHGLENPKLEMLEKILQKQFRSSDSPRGIIF 373
Query: 394 VE-RVITAIVLQSLLSELLPRHCTWKTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVN 450
R +L L + R + + + +GN+S ++K Q E++ FR G +N
Sbjct: 374 TRTRQSAHSLLLWLQQQPGLRTVDIRAQLLIGSGNSSQSTHMTQKDQQEVIRNFRSGTLN 433
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
++VATS+ EEGLD+ CN+V+ + S +Q+RGRAR S Y + G Q
Sbjct: 434 LLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGQSVYSFVATKGSRELQRE 493
Query: 511 LEN 513
L N
Sbjct: 494 LIN 496
>gi|307638596|gb|ACY78116.2| RNA helicase LGP2 [Ctenopharyngodon idella]
Length = 680
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 236/529 (44%), Gaps = 66/529 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R+YQ E ++ ALK +N+I++L TG GKT A+ + + + R VAV LV KV LV
Sbjct: 6 RSYQEEVVQAALKGENSIIWLPTGGGKTRAAVYVAKKHLETTRNAK--VAV-LVNKVHLV 62
Query: 82 PQQAEAIKMHTDLKVGKYWGD------MGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q H + + Y G + D D + + ++++ T QIL + L
Sbjct: 63 DQ-------HFNNEFNPYLGKAYRVKAISGDSSDKDLFGRLVKDSDLIICTAQILENALN 115
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP- 190
S + +L +LI+DECHH + + Y IM + + + + LP++ G+TASP
Sbjct: 116 SSEEEKHVELTDFSLLIIDECHHTQKESVYNKIMGRYVEKKVRK-ERKLPQVLGLTASPG 174
Query: 191 --IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
++ + + Q +L++++ V T S L +P +YD +
Sbjct: 175 TGGNKTLAKAVEHVLQICANLDSVI---VSTKNYASKLKEVVPRPRK-----QYDIVEKR 226
Query: 249 LYTHLADELA-MIELKH-------TRSLENLDLNEAQA---ELIRKKVSKINSTLLYCLS 297
D L M+ L H +RSL + + +A EL + V + N + C
Sbjct: 227 ALDPFGDHLKLMMSLIHEFMPSTVSRSLREVGTQDYEADVVELEKTGVKEENRLITQCAL 286
Query: 298 ELGVW-LALKAAETISCYESDFFAWEQLDGFGETIIKKF--GSDASQALVTYVPSGAEWS 354
L + AL +T+ + A+ LD F + K G+D ++ + +
Sbjct: 287 HLRQYNDALLIHDTVRMVD----AFNVLDEFYNSRSNKLLDGTDF------FLQGLFDEN 336
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ + LD+ K+ L +LL E++ + R IIF + T L +
Sbjct: 337 RVELKQLALDARYENPKLAQLQRTLLKEFKENKMSRGIIFSK---TRRGTHCLYDWVNAN 393
Query: 414 HCTWKTKYIA----GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
H K K A G +G+ ++ KQ +++FR G +N++++TS+ EEGLD+ CNL
Sbjct: 394 HELQKVKISAGILTGTGTGVNHMNQNKQKNTIKDFRLGHLNLLISTSVAEEGLDIAECNL 453
Query: 470 VIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN-YLAS 517
V+ + + Q+ GRAR NS Y ++ + G + N YL S
Sbjct: 454 VVRYGLLTNEIAQQQASGRARALNSVYSVVAEEGGRELRREFTNEYLES 502
>gi|344313229|gb|AEN04474.1| probable ATP-dependent helicase LGP2 [Carassius auratus]
Length = 680
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 236/529 (44%), Gaps = 66/529 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R+YQ E ++ ALK +N+I++L TG GKT A+ + + + R VAV LV KV LV
Sbjct: 6 RSYQEEVVQAALKGENSIIWLPTGGGKTRAAVYVAKKHLETTRNAK--VAV-LVNKVHLV 62
Query: 82 PQQAEAIKMHTDLKVGKYWGD------MGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q H + + Y G + D D + + ++++ T QIL + L
Sbjct: 63 DQ-------HFNNEFNPYLGKAYRVKAISGDSSDKDLFGRLVKDSDLIICTAQILENALN 115
Query: 136 LS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP- 190
S + +L +LI+DECHH + + Y IM + + + + LP++ G+TASP
Sbjct: 116 SSEEEKHVELTDFSLLIIDECHHTQKESVYNKIMGRYVEKKVRK-ERKLPQVLGLTASPG 174
Query: 191 --IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
++ + + Q +L++++ V T S L +P +YD +
Sbjct: 175 TGGNKTLAKAVEHVLQICANLDSVI---VSTKNYASKLKEVVPRPRK-----QYDIVEKR 226
Query: 249 LYTHLADELA-MIELKH-------TRSLENLDLNEAQA---ELIRKKVSKINSTLLYCLS 297
D L M+ L H +RSL + + +A EL + V + N + C
Sbjct: 227 ALDPFGDHLKLMMSLIHEFMPSTVSRSLREVGTQDYEADVVELEKTGVKEENRLITQCAL 286
Query: 298 ELGVW-LALKAAETISCYESDFFAWEQLDGFGETIIKKF--GSDASQALVTYVPSGAEWS 354
L + AL +T+ + A+ LD F + K G+D ++ + +
Sbjct: 287 HLRQYNDALLIHDTVRMVD----AFNVLDEFYNSRSNKLLDGTDF------FLQGLFDEN 336
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR 413
+ + LD+ K+ L +LL E++ + R IIF + T L +
Sbjct: 337 RVELKQLALDARYENPKLAQLQRTLLKEFKENKMSRGIIFSK---TRRGTHCLYDWVNAN 393
Query: 414 HCTWKTKYIA----GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
H K K A G +G+ ++ KQ +++FR G +N++++TS+ EEGLD+ CNL
Sbjct: 394 HELQKVKISAGILTGTGTGVNHMNQNKQKNTIKDFRLGHLNLLISTSVAEEGLDIAECNL 453
Query: 470 VIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN-YLAS 517
V+ + + Q+ GRAR NS Y ++ + G + N YL S
Sbjct: 454 VVRYGLLTNEIAQQQASGRARALNSVYSVVAEEGGRELRREFTNEYLES 502
>gi|348519875|ref|XP_003447455.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Oreochromis niloticus]
Length = 914
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 251/561 (44%), Gaps = 69/561 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS---PFVAVFLVPKV 78
R+YQ+E AL+ +N IV L TGSGKT +A+ + + +L R+ + P + LV KV
Sbjct: 215 RDYQMEVAGPALEGKNIIVCLPTGSGKTRVAVYITKE--HLDRRKAEGKPRKVIVLVNKV 272
Query: 79 VLVPQQ--AEAIK-MHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL----- 130
LV Q AE + + KV + GD + ++ E + K+++++ T QIL
Sbjct: 273 PLVEQHYSAEFLPFLKNKYKVERVSGDSQLKI----SFTEIVKKNDIIICTAQILENYLE 328
Query: 131 -LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY------HRLLETGDS--NLP 181
+G L+ + ++I+DECHH + Y IM + RL++ LP
Sbjct: 329 RANGGEDEGVNLSDLTLIIIDECHHTQKGGVYNHIMMRYLKQKHKNKRLIKEQKEPVPLP 388
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVL--SNFIPFSTAKFKF 239
+I G+TASP + E+ + L S++ T + E I S +
Sbjct: 389 QILGLTASPGVGGATKMEKAEEHILRICANLDASRIMTRSHEEFKKEQRKIIVSVEDRRE 448
Query: 240 YKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSEL 299
+ ++ + T + + EL T L + + + + R+ N + C L
Sbjct: 449 DPFGDVIKKIMTAIHNHA---ELTPTCDLGSQNYEQWVVQKERQAAKDENQKVRVCAEHL 505
Query: 300 GVWL-ALKAAETISCYESDFFAWEQLDGFGETIIKKFG----------SDASQALVTYVP 348
+ +L + TI D F++ L+ + E +KK +D + L
Sbjct: 506 RQYSESLNLSNTIRM--QDAFSF--LNKYYEEEMKKKTAPEEEHKIQITDTERFLFNLFK 561
Query: 349 SGAE--WSIGDDSKFNLDS-GLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQS 405
+ ++ + ++ DS L KI+ S E RG I+F++ +AI L
Sbjct: 562 DNKKELETLAKNPEYENDSLSKLRTKILHEFSSRDEARG------IVFIKTRRSAIALNQ 615
Query: 406 LLSELLPRHCTW--KTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
+ E P+ K+ Y+ G+ S ++ + +Q +++++F +G VN+++AT++ EEG
Sbjct: 616 WIQE-NPKFADIGVKSAYVIGGGDQSVVKPMTSAEQKDVLKKFGKGQVNLLIATTVAEEG 674
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM-VKSGDSTTQSRLENYLASGNK 520
LD+ +CN VI + + IQ++GR R ++S Y L+ VK+ + + Y
Sbjct: 675 LDIPACNFVIRYGLVTNEIAMIQAQGRGRAEDSSYTLVEVKNSGVAEKECVNEY------ 728
Query: 521 MRKEVLSHASLPCSPLNNHMY 541
RK +++ A LN Y
Sbjct: 729 -RKNMMNKAIQKIKLLNQAAY 748
>gi|432329297|ref|YP_007247441.1| ERCC4-like helicase [Aciduliprofundum sp. MAR08-339]
gi|432136006|gb|AGB05275.1| ERCC4-like helicase [Aciduliprofundum sp. MAR08-339]
Length = 753
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 217/489 (44%), Gaps = 70/489 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ++ E+ALK NT+V L TG GKT+IAI++L +L K + +FL P LV
Sbjct: 18 REYQVKIAESALKGNTLVVLPTGLGKTIIAILVL---VEVLNKKGGKI-LFLAPTKPLVE 73
Query: 83 QQAEAIKMHTDLK-VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
Q A +K T ++ + GD+G G + ++++ TPQ++ + + L
Sbjct: 74 QHARTVKNLTKIENLAVLTGDVGKKKRRGM-----IKDADIIIATPQVIQNDVISGDINL 128
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
++I DE H A G + Y I ++ E+ +L I G+TASP E+
Sbjct: 129 RDFSLIIFDEAHRAVGNYAYVYIAKKYR----ESRTDHL--ILGITASP-----GGDEEK 177
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPF----------STAKFKFYKYDEIPHALYT 251
+ I +L + N ++ T V F S K + K E+ +++ T
Sbjct: 178 IMEIIENL-GVENVEIRTEEDPDVKRYVKGFQIRWVELPMPSEIKELYTKLKELYNSIIT 236
Query: 252 HLAD-ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAET 310
L L + K TRS AQ E+ K + +L ++ + + AL+ ET
Sbjct: 237 ELRKFGLFVTVRKPTRSDVLRAQKIAQQEIREGKTEFYQAAMLITMA-IKIDYALEYLET 295
Query: 311 I---SCYESDFFAWEQLDGFGETIIKKFGSDASQALV----------TYVPSGAEWSIGD 357
SCY E+ + G GS A++ LV D
Sbjct: 296 QGFESCYNYLMRIIEEGNSKG-------GSKAARTLVRDERFIEIIRVARRISERMDKMD 348
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP--RHC 415
+ K N ++ ++I E IR I+F TA ++ L+E +P R
Sbjct: 349 NPKLNALKTIVRKEIAANPE----------IRIIVFTHFRETAQIVADSLNE-VPNVRAI 397
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ + G + G++ +++Q EIVE F+RG NV+VATS+ EEGLD+ + +LVI ++P
Sbjct: 398 RFVGQASKGEDRGLK---QREQVEIVERFKRGEYNVLVATSVAEEGLDIPATDLVIFYEP 454
Query: 476 SRTVCSFIQ 484
+ IQ
Sbjct: 455 VPSEIRSIQ 463
>gi|268325930|emb|CBH39518.1| putative ATP-dependent RNA helicase [uncultured archaeon]
Length = 780
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 217/513 (42%), Gaps = 77/513 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+ A K++ +V L TG GKT IA+ +L + + + +FL P LV
Sbjct: 23 RRYQIAIAREARKESLMVVLPTGLGKTTIALFVL------INRLAKGKVLFLAPTRPLVE 76
Query: 83 QQAEAIK--MHTDLKV-----GKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
Q + + ++ D V G D WD A +++V TPQI+ + L
Sbjct: 77 QHSAFLNDVLNIDPSVIQTLTGNVLADKRAKLWDDA---------KIIVSTPQIIENDLL 127
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
+ L+ + ++I DECH A G + Y I ++ + + P + GMTASP K
Sbjct: 128 SNRINLSAVSLIIFDECHRAVGNYSYVYIAEKYAEQAI------APLVLGMTASPGSDK- 180
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA------L 249
+KI ++ + K +E ++ P+ K ++ ++P A L
Sbjct: 181 --------EKIKEICISLGVKKVESRTE-YDTDVAPYIHKKEIEWRTLDVPVAIKKQKRL 231
Query: 250 YTHLADE-------LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
+ DE L + K + + +L E + + + S+ ++ L LS
Sbjct: 232 LDAILDERIGELQKLGYVRKKRGKDVTKKELLELRTIITVQLASQKHADLYKALSLQAEV 291
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQAL------VTYVPSGAEWSIG 356
L +K A + + F + K GS A++ L V + A + G
Sbjct: 292 LKIKHAIELIETQGIFAVNRYFGRLKNEALSKEGSKAAKRLLRDDRFVDAMSMAASYE-G 350
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHC 415
+ K N +L E E+R + R I+F R +++ L
Sbjct: 351 EHPKLNAVIQILRE----------EFRVNPNTRIIVFTNYRDTAEMIISGLQDRNSEEEG 400
Query: 416 TWKTKYIA----GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
K+I + G++ +K+Q EI+ +F+ G NV+VATS+ EEGLD+ + +LV+
Sbjct: 401 IRAVKFIGQATKAEDKGLK---QKEQVEIITKFKAGDYNVLVATSVAEEGLDIPATDLVL 457
Query: 472 MFDPSRTVCSFIQSRGR-ARMQNSDYLLMVKSG 503
++P + IQ +GR AR + ++++ G
Sbjct: 458 FYEPIPSAIRSIQRKGRTARKKVGKVIVLIAKG 490
>gi|325185579|emb|CCA20062.1| Dicerlike 1 (DCL1) putative [Albugo laibachii Nc14]
Length = 1609
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 163/359 (45%), Gaps = 74/359 (20%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQN-NHEGLLSVKKERIISNAALCKLGCEQKLPGFIRT 1055
E E LGD+FLK S +++ ++ EG LS+ + II N LC+ ++L +I
Sbjct: 1214 ERCEVLGDTFLKLETSWYMYQMRRDIPDEGTLSMLRRDIIRNDRLCQFSLLKELHHYI-- 1271
Query: 1056 ESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK----KVKSKTVADVVEALIGAFL 1111
+ P EL F+ K G+ SK +ADV+EA+ GA++
Sbjct: 1272 --------VYPA------ELEQHP-FSCWKPSCMGKTPQSINAPSKWIADVLEAICGAYI 1316
Query: 1112 STGGENVGLIFLDRIGIKVDFVNVPYQRQFQ-----------------------VHAERL 1148
GE FL+ +GI V + + ++F +H E L
Sbjct: 1317 IGHGEKGARYFLNWVGIHVLDDSFEFSKRFYPDCYPKTLFPEAFKHVGKWKFSILHHETL 1376
Query: 1149 VN-VRHLESLLNYSFRDPSLLVEALTHGSYMLPEI----------PRCYQRLEFLGDAVL 1197
V +R LE L Y FR+ LL+EA+TH S EI Y+RLE+LGDA++
Sbjct: 1377 VKKMRLLEQRLCYRFRNKLLLLEAITHPSVRRLEIVMDNEKRVSWQGNYERLEYLGDALI 1436
Query: 1198 DYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVK-HGLHKHI----LHASHELYK 1252
+YL Y + + PG L++ ++A+V+ND +++ G+ + I + E+
Sbjct: 1437 EYLTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAIACFGVDEAICLGHVQFDREIMN 1496
Query: 1253 RI---------NITVDSFEK-LSLGSTFGWESVT---SFPKALGDIIESLAGAIFVDSG 1298
+I + VD+ + S ST T + PK L D++E+L A+F+DSG
Sbjct: 1497 KIKTIPRKYAVDYNVDTIQPGHSRNSTTKSNCTTNLLALPKILADVMEALVAAVFLDSG 1555
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 952 RLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAI--TTKKCQEDFHLESLETLGDSFLKY 1009
RL L +N LL ++ +T P+++ LE + K+ + E LE LGD+ ++Y
Sbjct: 1381 RLLEQRLCYRFRNKLL--LLEAITHPSVRRLEIVMDNEKRVSWQGNYERLEYLGDALIEY 1438
Query: 1010 AASQQLFKTYQNNHEGLLSVKKERIISNAALCK--LGC----EQKLPGFIRTESFDP--- 1060
F + G LS K +SN AL K + C E G ++ FD
Sbjct: 1439 LTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAIACFGVDEAICLGHVQ---FDREIM 1495
Query: 1061 -KMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS------KTVADVVEALIGAFLST 1113
K+ IP + Y N D++ G T + + K +ADV+EAL+ A
Sbjct: 1496 NKIKTIPRKYAVDY--NVDTIQPGHSRNSTTKSNCTTNLLALPKILADVMEALVAAVFLD 1553
Query: 1114 GGENVGLI---FLDRI 1126
G+++G+I FL R+
Sbjct: 1554 SGKDLGIIRDVFLGRL 1569
>gi|161579129|gb|ABX72052.1| Dicer-1 protein [Tribolium castaneum]
Length = 157
Score = 105 bits (261), Expect = 3e-19, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 1105 ALIGAFLSTGGENVGLIFLDRIGIKV------------DFVNVPYQRQFQVHAERLVNV- 1151
ALIGA+L G L+F+ +GI+V + P E L +
Sbjct: 1 ALIGAYLIECGPRGALLFMAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLL 60
Query: 1152 ---RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
E + Y FRD S L++ALTH S+ + CYQRLEFLGDAVLDYLIT +LY
Sbjct: 61 DGYDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYED 120
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
SPG LTD+RSA VNN +A +V++G H++
Sbjct: 121 TRMHSPGALTDLRSALVNNTIFASLAVRNGFHRY 154
>gi|301106827|ref|XP_002902496.1| dicer-like, putative [Phytophthora infestans T30-4]
gi|262098370|gb|EEY56422.1| dicer-like, putative [Phytophthora infestans T30-4]
Length = 717
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R +Q E LE A ++N ++ +TG GKT +AI LL Y K A F+ P LV
Sbjct: 7 RAFQREVLELAREKNVVMVGDTGIGKTFLAIALLSEQDYSGDKR----AFFMAPTRQLVV 62
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
Q I+ + L+V Y G D WD W+ E+ V V TP+I+ + L Y L+
Sbjct: 63 QITAKIRQTSTLRVNSYCGRTA-DLWDATQWERELQLTRVFVCTPEIVRNVLLKGYVSLS 121
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ +L+ DECHH +H YA ++ F + +PRIFG TA P +
Sbjct: 122 RMNLLVFDECHHVTKRHPYAQVIKMFNQE----NSACMPRIFGTTACPTR 167
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
K +++F G + V+V+T++ EG+D C L+I+ D T +Q +GRAR ++
Sbjct: 474 KMETTLKKFESGSIRVLVSTAVSVEGVDFPQCGLIIVMDRVGTARKLMQLKGRARHEDGV 533
Query: 496 YLLMVKSGDSTTQ------SRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFY--H 547
+ + GD + +R + R++V + P S + M G +
Sbjct: 534 VYYLAEEGDLGHEVYYKQLTREVEVIDQLEFSREKVETIQQQPRS-IAAEMMGAGVHKIE 592
Query: 548 VESTGTIATLSSSVSLIYFYCSRLPSDGY-------FKPTPKFHINKEMGICTLYLPNNC 600
+ESTG + L SS++ I +C LP+ + + T + K M L LP
Sbjct: 593 IESTGAVLDLDSSITCINQFCQSLPTRLFTVDAKRLYTITEARYGGKSMFTAELNLPMEL 652
Query: 601 PIQT 604
++T
Sbjct: 653 ELET 656
>gi|73965821|ref|XP_860532.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 3
[Canis lupus familiaris]
Length = 678
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 228/537 (42%), Gaps = 90/537 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N IV+L TG+GKT R+ AY+ ++ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIVWLPTGAGKT-------RAAAYVAKRHLETVDQAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILL 131
V LV Q E +GK W GDMG A + H++++ T ++L
Sbjct: 57 VHLVTQHCEEFSR----MLGKRWAIITLSGDMG----PRAGFGHLARSHDLIICTAELLQ 108
Query: 132 DGL----RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-HRLLETGDSNLPRIFGM 186
L + +LN +L++DECHH Y I++ + H+L T LP++ G+
Sbjct: 109 MALTSPEEEEHVELNAFSLLVVDECHHTHKDTVYNLILSRYLEHKLQRT--RPLPQVLGL 166
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFIPFSTAKFKFYK---- 241
TASP S+ + H L+ N + S E+ S K Y
Sbjct: 167 TASPGTGGASTLDGAI---DHILQLCANLDTWHIMSPENHRPQLQEHSAQPCKQYSLCHR 223
Query: 242 -----YDEIPHALYTHLADELAMIELKH---TRSLEN----LDLNEAQAELIRKKVSKIN 289
+ ++ L + + L M L T++ E L + AQA L +++V
Sbjct: 224 RSQDPFGDMLKKLMDRIHNRLEMPALNRDFGTQTYEQQVVELSQDAAQAGLQQRRV---- 279
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGS--DASQALVTYV 347
Y L AL +T+ ++ +K G D +A T V
Sbjct: 280 ----YALHLRRYNDALLIHDTVRAVDA---------------LKSLGDFYDRERATKTQV 320
Query: 348 PSGAEW--SIGDDSKFNLDSGLLTE-----KIVCLIESLLEYRGVEDI-RCIIFVE-RVI 398
W ++ DD K L + L T+ K+ L + L E G D R IIF + R
Sbjct: 321 LQAERWLLALFDDYKNEL-AHLATQTPENPKLEMLEQILREQFGHSDSPRGIIFTQTRQS 379
Query: 399 TAIVLQSLLSELLPRHCTWKTKYIAG--NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATS 456
T +L L + + + + G N+S +++ Q E++ +FR G +N++VATS
Sbjct: 380 THSLLLWLQQQPGLQTVDIRADLLIGAGNSSQNTHMTQRDQQEVIRKFRVGTLNLLVATS 439
Query: 457 ILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+ EEGLD+ CN+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 440 VAEEGLDIPQCNVVVRYGLLSNEISMVQARGRARAGRSIYSFVATQGSRELRRELIN 496
>gi|374628568|ref|ZP_09700953.1| helicase domain-containing protein [Methanoplanus limicola DSM
2279]
gi|373906681|gb|EHQ34785.1| helicase domain-containing protein [Methanoplanus limicola DSM
2279]
Length = 776
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 232/512 (45%), Gaps = 62/512 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL +AL+ NT+V L TG GKT +A++ S K + + + P LV
Sbjct: 17 RRYQLSIAVHALEGNTMVVLPTGLGKTAVALLTTASRL----KTAGGKMLMMAPTKPLVD 72
Query: 83 QQAEAIKMHTDLKVGKYWGD---MGVDFWDGAT----WKEEMSKHEVLVMTPQILLDGLR 135
Q +M T+L + D G F+ G T KE K V++ TPQ++ + +
Sbjct: 73 QHR---RMFTELLIEPENPDDDFSGFAFFTGETKTSQRKEMWEKSRVILATPQVIKNDII 129
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
+ L + +LI+DECH A G + YA I + ++TG + P I MTASP
Sbjct: 130 AGRYSLKDVTLLIVDECHRAVGNYAYAFIAESY----MQTGKN--PLILAMTASP----- 178
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLAD 255
S E +K+H++ + K+ +E + P+ + Y E+P L +
Sbjct: 179 GSKE----EKVHEVCENLTIKIVESRTEDD-PDVKPYIHEREVEYVNVELPEKLEESVGI 233
Query: 256 ELAMIELKHTRSLENLDLNEAQAE-LIRKKVSKINSTLLYCLS--ELGVWLALKA-AETI 311
+++E K +L ++ + + L K+++ IN+ + + E +LA AE +
Sbjct: 234 LKSILE-KRLNTLSDMGYTVPRPDKLSMKELNGINAQVQRNIQKREPDAFLAASIHAEIM 292
Query: 312 SCYESDFFAWEQLDGFGETIIKKFGSD-ASQALVTYVPSGAEWS--IGDDSKFN----LD 364
+ Q G TI+K + + A +A + PSG++ + D F
Sbjct: 293 KIRHAVTLGESQ----GSTILKGYLNKLAGEA---FSPSGSKAGKRLAADHTFQDLLARS 345
Query: 365 SGLLTE------KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWK 418
G E K+ ++ + L+ D R ++F T +LLSE L +
Sbjct: 346 DGWKEEIHPKPDKVAEIVRAQLDE--FPDSRILVFANFRDTV----NLLSERLNKEGFEC 399
Query: 419 TKYIA-GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
++I + + S+KKQ E + +FR G V+VATS+ EEGLDV S +LVI ++
Sbjct: 400 ARFIGQASRDSEKGLSQKKQIETLSKFREGEFRVLVATSVGEEGLDVPSTDLVIFYEAVP 459
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS 509
+ IQ +GR S ++++ + +T ++
Sbjct: 460 SEIRSIQRKGRTGRHGSGKIIVLITKGTTDET 491
>gi|254911056|ref|NP_001157171.1| retinoic acid-inducible gene-I [Salmo salar]
gi|254692471|emb|CAX48607.2| retinoic acid-inducible gene-I [Salmo salar]
Length = 962
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 229/530 (43%), Gaps = 58/530 (10%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E E + +NT++ TG GKT++A+ + + + K + VF+ KV +
Sbjct: 269 REYQRELAEPVFQGKNTVICAPTGCGKTVVALAICEHHLKVKGKGAK--VVFMATKVDVF 326
Query: 82 PQQAEAIKMH-----TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRL 136
QQ + + H D+++ G+ G D + K M ++++V+TPQIL++ +
Sbjct: 327 NQQYKLFQDHFQEKDPDIRINGLCGNQG----DQLSMKVVMENNDIIVLTPQILVNAVAG 382
Query: 137 SYF-KLNMIKVLILDECHHARGKHQYACIMTEFYHRLL--ETGDSNLPRIFGMTAS---- 189
L+ +LILDECH+ GKH Y IMT + L E +LP+I G+TAS
Sbjct: 383 GEITSLSCFSLLILDECHNTTGKHPYNIIMTSYLDAKLSKEQSGQHLPQIVGLTASVGIG 442
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHAL 249
K++ S +E + Q L++ + S ++T E L +++ +F F
Sbjct: 443 SFKNQ-SEAENNICQLCASLDSRIISTIHTNTDE--LQSYVHTPEKEF-FLVEKRHTDPF 498
Query: 250 YTHLADELAMIE--------LKHTRSLENLDLNEAQAELIRKKVSKINSTL--------- 292
+ D +A IE ++ ++EN D + E V K L
Sbjct: 499 IRIIRDIMAKIEGLAKTVYNIESLSAIENRDYGSQKYEQWIVDVQKKCRVLQLKDQEEES 558
Query: 293 LYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETI--IKKFGSDASQALVTYVPSG 350
C + L+ D + LD I +K G D ++ +T G
Sbjct: 559 RVCRALYNYTEHLRKYNDALIINEDARTKDALDYLSVFIQQVKNAGHDETEQRLTAYFDG 618
Query: 351 AEWSIGDDSKFNLDSGLLTEK-IVCLIESLLE--YRGVEDIRCIIFVERVITAIVLQSLL 407
+ + L SG E + +++ +LE YR ++ + ++FV A L+S +
Sbjct: 619 QQGVLR-----GLSSGGQKENPKLDMLQYILEEQYRQNDETKSVLFVRTRALADALKSWI 673
Query: 408 SE-----LLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR--GLVNVIVATSILEE 460
E L + + +G + K+ +++ F+ +++ATS+ +E
Sbjct: 674 EESDSLKFLKPGVLIGRGHKSSQLTGTRMTLNSKKG-VLDSFKSFDNQSKILIATSVADE 732
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
G+D+ CNLV+M++ V +Q RGR R Q S +L+ D + +
Sbjct: 733 GIDIPQCNLVLMYEYVGNVVKMVQVRGRGRAQGSKCILVSDKKDRIDKEK 782
>gi|325185212|emb|CCA19701.1| dicerlike putative [Albugo laibachii Nc14]
Length = 760
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 15 SADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFL 74
+ DTL R++Q L A N ++ +TG GKT +AI+LL Y K A F+
Sbjct: 8 AEDTL---RSFQQHILSRARHNNVVMVGDTGIGKTYVAIVLLSQQDYSRNKR----AFFM 60
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
P LV Q I+ T L V Y D+WD W++E+ H V V TPQ++ + L
Sbjct: 61 APTRQLVLQIESKIRQITTLPVRAYCSS-EFDYWDEYQWEQELGFHRVFVTTPQVVRNAL 119
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
Y + I +L+ DECHH +H YA IM + Y D PRIFG TA P ++
Sbjct: 120 EKGYISMKNINLLVFDECHHVSKRHPYAHIM-KLYDPNAHPDDK--PRIFGATACPTQN 175
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
I++ F++G ++V+TS+ EG+D C L+++ DP + IQ RGRAR + +
Sbjct: 519 ILDRFQQGKTRMLVSTSVSVEGVDFPLCGLIVVMDPVTSPRMLIQLRGRARHNDGAIYYL 578
Query: 500 VKSGDSTTQSRLENYLASG---NKMRKEVLSHASLPCSP-------LNNHMYGEDFYHV- 548
+ GD + ++ L N M E +L P L + D V
Sbjct: 579 GEEGDVMDEVNYKSLLVKAEQINAMNFESDKQETLHNQPRSKSVRDLQTCQFVADDCQVA 638
Query: 549 -ESTGTIATLSSSVSLIYFYCSRLPSDGY-FKPTPKFHI-------NKEMGICTLYLPNN 599
+STG I L SS S ++ +C LP + P F I NK+M + LPN
Sbjct: 639 IKSTGAIIDLDSSTSSLHQFCQSLPPLLFDVNPQKLFTIESLTTAHNKQMYKAKVSLPNQ 698
Query: 600 CPIQTVIAQGNI--KTLKQA-ACLEACKKLHQIGALTDNL 636
+ + G + K+L +A A L AC+ L++ G L D L
Sbjct: 699 LGV-SACESGLMPSKSLAKAVAALRACRSLYEQGLLDDKL 737
>gi|435849257|ref|YP_007311507.1| ERCC4-like helicase [Natronococcus occultus SP4]
gi|433675525|gb|AGB39717.1| ERCC4-like helicase [Natronococcus occultus SP4]
Length = 814
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 232/525 (44%), Gaps = 62/525 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL+ A +T+V L TG GKT +++++ A L + A+ L P LV
Sbjct: 26 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVT---ARRLEEVGG-TALMLAPTKPLVQ 81
Query: 83 QQAE----AIKMHTDLKVGKYWGDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q AE A+++ D ++ + GD+ D W+ AT V++ TPQ++ + L
Sbjct: 82 QHAEFYREALQVPDD-EIVVFTGDVSPDDRAALWEDAT---------VVMATPQVIENDL 131
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S L+ + DECH A G + Y I E YH D+ P + GM+ASP
Sbjct: 132 VGSRISLSDVTHCTFDECHRATGDYAYNYI-AERYH-----ADARDPLVTGMSASP---- 181
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD----EIPHALY 250
E+ + +L L +V T ++ ++ F + +++ EI AL
Sbjct: 182 -GGDEEAILEVCENL-GLQEVEVMT-EEDADVAEFTHDTDVEWERIDLPEEVLEIRDALN 238
Query: 251 THLADELAMI-ELKHTRSLE----NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLAL 305
+ D L + EL S + DLN +AEL R + S +S + L
Sbjct: 239 EVITDRLETLKELGVAGSTQPDQSQKDLNRMRAELQR-LIDNDQSEGFEGMSVHAEVMKL 297
Query: 306 KAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDS 365
+ A T+ +S D S ASQ +V+ P E ++ KF+
Sbjct: 298 RQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSD-PRVRE-AMRRAEKFDELH 355
Query: 366 GLLTEKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA- 423
+ + L E+L G+ED R I+F E TA L LSE +++
Sbjct: 356 PKYRKSRMLLAETL----GLEDGERVIVFTESRDTAEALTEFLSESFD-----AKRFVGQ 406
Query: 424 GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
G+ G ++K+Q E+++ FR G V+V+TS+ EEGLDV +LV+ ++P T I
Sbjct: 407 GDREGSDGMTQKEQQEVLDAFRAGKFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSI 466
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH 528
Q +GR Q+ ++++ + D +R E Y + KE+ S
Sbjct: 467 QRKGRTGRQSEGRVVVLLAED----TRDEAYFWISKRREKEMESE 507
>gi|395532380|ref|XP_003768248.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Sarcophilus
harrisii]
Length = 675
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 226/517 (43%), Gaps = 69/517 (13%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT A + R + ++ K VAV LV KV LV
Sbjct: 4 RPYQWEVILPALEGKNIIMWLPTGTGKTRAAAYVARRHLGMVDKAK--VAV-LVNKVHLV 60
Query: 82 PQQAEAIKMHTDLKVGKYWG--DMGVDFWDGATWKEEMSKHEVLVMTPQI----LLDGLR 135
Q K +G W M D A + +++++ T ++ L+ +
Sbjct: 61 TQH----KKEFSQMLGPKWNIVTMSGDGGFRAGFGYLARSNDLVICTAELFRLALISTEK 116
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
L+ +LI+DECHH + Y I++ + R L+ G NLP+I G+TASP
Sbjct: 117 EEQVDLSAFSLLIVDECHHTQKDSVYNVILSYYLERKLQ-GSKNLPQILGLTASPGTGGA 175
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASES----VLSNFIPFSTAKFKFYK------YDEI 245
S+ E K H L+ N + S L P ++ + + ++
Sbjct: 176 STLEG---AKNHILQLCANLDICRIMSPQKYYEQLEELSPQPCKRYDLSQERSLDPFGDL 232
Query: 246 PHALYTHLADELAMIELKHTRSLEN-----LDLNEAQAELIRKK-------VSKINSTLL 293
L + D+L M +L + ++L++A AE R + + K N LL
Sbjct: 233 LKKLMDKIQDKLKMPQLGRDFGSQRYEQQVVELSKAAAEQGRLQQRVFALHLRKYNDALL 292
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGFG----ETIIKKFGSDASQALVTYVPS 349
+ ++A + ++ F+A E++ G E + + + +AL
Sbjct: 293 -------IHGTVRAVDALTSLRK-FYAEERVRKVGVLPAEGWLLQLFEEHQEALALL--- 341
Query: 350 GAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSE 409
A + ++ K +L E+ S RG I+F + +A L L E
Sbjct: 342 -ASDTHSENPKLEDLEQILEEQFSAPGPS----RG------IVFTQTRQSAHALLLWLQE 390
Query: 410 LLP-RHCTWKTKYIAG--NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQS 466
R K + + G +NS I ++ +Q E+++ FR G VN++VATS+ EEGLD+
Sbjct: 391 RPTLRQLGIKAQVLTGAGHNSQITHMTQTEQLEVIQRFRAGTVNLLVATSVAEEGLDIPQ 450
Query: 467 CNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
CN+V+ + S +Q+RGRAR S Y + G
Sbjct: 451 CNVVVRYGLLTNEISMMQARGRARASQSVYSFVASQG 487
>gi|317156821|ref|XP_001826035.2| hypothetical protein AOR_1_660054 [Aspergillus oryzae RIB40]
Length = 939
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 60/429 (13%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL-EAITTKKCQEDFHLESLETLG 1003
PSI+HR+ L+A L+ + + Q + +L A++ S+ +G
Sbjct: 497 LAPSIIHRIGVYLIAEKLRKQIFSNP-QAARFERMDLLCIALSPTDDMHRHEFRSMAFIG 555
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D+ +K+ ++QLF + HEGLL+ K+ I+S+ L C ++ T F+ K W
Sbjct: 556 DAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRW 615
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGEN----- 1117
P S + K T R+ V + TVAD+V+AL G AFL G +
Sbjct: 616 -RPSFVSTTLS----------KSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFICA 664
Query: 1118 VGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
+I + + + Y + + + LE+LL Y+F D SL +E++TH S
Sbjct: 665 AAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHPSC 724
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN---------- 1227
+ Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 725 VGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCLTF 784
Query: 1228 -----------DCYALSSV-----KHGLHKHILHASHELYKRINITVDSF--------EK 1263
D + SV + L+ + S L +++ V+
Sbjct: 785 HWEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIKRD 844
Query: 1264 LSLGSTFGWESVTSFP--KALGDIIESLAGAIFVDSGCN---REVVFQ--SIRPLLEPMI 1316
L + W ++ F K DI++S+ GAI++DS + E + + I PLLE I
Sbjct: 845 LWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEHFI 904
Query: 1317 TPETMRFHP 1325
+ + + HP
Sbjct: 905 SHDVVTDHP 913
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 30/179 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E + +L+ N IV L FL P V L
Sbjct: 20 RDYQVEMVNKSLEGNLIVVL----------------------------IWFLCPTVALCN 51
Query: 83 QQAEAIKMHTD-LKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
Q I H + + + VD W TW ++ +V + T Q+L D L +
Sbjct: 52 QHVRTITAHVPPMWCRSFTSNDNVDHWGTVETWNIALASVKVAISTYQVLYDALVHRFVT 111
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++ + ++I DE HH H + IM E+YH ++ D P I G+TASPI S +S+ E
Sbjct: 112 MDRLSLIIFDEAHHCTDDHPASKIMREYYHTEPQSHDKQTPYILGLTASPILSNISTLE 170
>gi|83774779|dbj|BAE64902.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1256
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 60/429 (13%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL-EAITTKKCQEDFHLESLETLG 1003
PSI+HR+ L+A L+ + + Q + +L A++ S+ +G
Sbjct: 814 LAPSIIHRIGVYLIAEKLRKQIFSNP-QAARFERMDLLCIALSPTDDMHRHEFRSMAFIG 872
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D+ +K+ ++QLF + HEGLL+ K+ I+S+ L C ++ T F+ K W
Sbjct: 873 DAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRW 932
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGEN----- 1117
P S + K T R+ V + TVAD+V+AL G AFL G +
Sbjct: 933 -RPSFVSTTLS----------KSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFICA 981
Query: 1118 VGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
+I + + + Y + + + LE+LL Y+F D SL +E++TH S
Sbjct: 982 AAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHPSC 1041
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN---------- 1227
+ Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 1042 VGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCLTF 1101
Query: 1228 -----------DCYALSSV-----KHGLHKHILHASHELYKRINITVDSF--------EK 1263
D + SV + L+ + S L +++ V+
Sbjct: 1102 HWEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIKRD 1161
Query: 1264 LSLGSTFGWESVTSFP--KALGDIIESLAGAIFVDSGCN---REVVFQ--SIRPLLEPMI 1316
L + W ++ F K DI++S+ GAI++DS + E + + I PLLE I
Sbjct: 1162 LWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEHFI 1221
Query: 1317 TPETMRFHP 1325
+ + + HP
Sbjct: 1222 SHDVVTDHP 1230
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 24/283 (8%)
Query: 375 LIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI----Q 430
L+++L+E + R +IFV T + L+ L+ H + ++ G G+ Q
Sbjct: 281 LLDTLIEEHR-KGFRALIFVSLRATVLALKWLIEN----HPETRRRFRCGTFVGMSRIHQ 335
Query: 431 CQSR-------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
++R + Q E +++FR G++++I+ T LEEG+D+ +CN V+ F+ + SFI
Sbjct: 336 SKTRLGDVHDIRSQMETLQKFRDGVLDLIITTDALEEGMDIPACNTVLNFNCILNLKSFI 395
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
Q RGRAR + S + + ++ + L + S + + LP S ++ +
Sbjct: 396 QRRGRARREQSKFFIFLQDEEDLKNVSLLQFRESELVRKLQDEGRTVLPDSLNHDERLRD 455
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMG--ICTLYLPNNC 600
STG T+ +++S +Y +C LP+ + +P F + E G + LP+N
Sbjct: 456 SLAFSSSTGAQMTMGNAISHLYRFCGELPAQPFVSNSPAFSYETDECGQVQAIVRLPSNL 515
Query: 601 -----PIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+++ K K+ A L+A K L + D+ LP
Sbjct: 516 DPSLQTFKSLRKWAKKKWAKEDAALQAYKALFHARLINDHFLP 558
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 68 PFVAVFLVPKVVLVPQQAEAIKMHTD-LKVGKYWGDMGVDFWDGA-TWKEEMSKHEVLVM 125
P + FL P V L Q I H + + + VD W TW ++ +V +
Sbjct: 5 PQLIWFLCPTVALCNQHVRTITAHVPPMWCRSFTSNDNVDHWGTVETWNIALASVKVAIS 64
Query: 126 TPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFG 185
T Q+L D L + ++ + ++I DE + IM E+YH ++ D P I G
Sbjct: 65 TYQVLYDALVHRFVTMDRLSLIIFDEGNK---------IMREYYHTEPQSHDKQTPYILG 115
Query: 186 MTASPIKSKVSSSEQ 200
+TASPI S +S+ E+
Sbjct: 116 LTASPILSNISTLEE 130
>gi|391873779|gb|EIT82787.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1089
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 60/429 (13%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVL-EAITTKKCQEDFHLESLETLG 1003
PSI+HR+ L+A L+ + + Q + +L A++ S+ +G
Sbjct: 647 LAPSIIHRIGVYLIAEKLRKQIFSNP-QAARFERMDLLCIALSPTDDMHRHEFRSMAFIG 705
Query: 1004 DSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMW 1063
D+ +K+ ++QLF + HEGLL+ K+ I+S+ L C ++ T F+ K W
Sbjct: 706 DAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGKRW 765
Query: 1064 IIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGEN----- 1117
P S + K T R+ V + TVAD+V+AL G AFL G +
Sbjct: 766 -RPSFVSTTLS----------KSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQAFICA 814
Query: 1118 VGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSY 1177
+I + + + Y + + + LE+LL Y+F D SL +E++TH S
Sbjct: 815 AAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESMTHPSC 874
Query: 1178 MLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN---------- 1227
+ Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 875 VGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLCLTF 934
Query: 1228 -----------DCYALSSV-----KHGLHKHILHASHELYKRINITVDSF--------EK 1263
D + SV + L+ + S L +++ V+
Sbjct: 935 HWEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLHVIKRD 994
Query: 1264 LSLGSTFGWESVTSFP--KALGDIIESLAGAIFVDSGCN---REVVFQ--SIRPLLEPMI 1316
L + W ++ F K DI++S+ GAI++DS + E + + I PLLE I
Sbjct: 995 LWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPLLEHFI 1054
Query: 1317 TPETMRFHP 1325
+ + + HP
Sbjct: 1055 SHDVVTDHP 1063
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 24/283 (8%)
Query: 375 LIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGI----Q 430
L+++L+E + R +IFV T + L+ L+ H + ++ G G+ Q
Sbjct: 114 LLDTLIEEHR-KGFRALIFVSLRATVLALKWLIEN----HPETRRRFRCGTFVGMSRIHQ 168
Query: 431 CQSR-------KKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
++R + Q E +++FR G++++I+ T LEEG+D+ +CN V+ F+ + SFI
Sbjct: 169 SKTRLGDVHDIRSQMETLQKFRDGVLDLIITTDALEEGMDIPACNTVLNFNCILNLKSFI 228
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
Q RGRAR + S + + ++ + L + S + + LP S ++ +
Sbjct: 229 QRRGRARREQSKFFIFLQDEEDLKNVSLLQFRESELVRKLQDEGRTVLPDSLNHDERLRD 288
Query: 544 DFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKF-HINKEMG--ICTLYLPNNC 600
STG T+ +++S +Y +C LP+ + +P F + E G + LP+N
Sbjct: 289 SLAFSSSTGAQMTMGNAISHLYRFCGELPAQPFVSNSPAFSYETDECGQVQAIVRLPSNL 348
Query: 601 -----PIQTVIAQGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+++ K K+ A L+A K L + D+ LP
Sbjct: 349 DPSLQTFKSLRKWAKKKWAKEDAALQAYKALFHARLINDHFLP 391
>gi|213513760|ref|NP_001133649.1| probable ATP-dependent RNA helicase DHX58 [Salmo salar]
gi|209154816|gb|ACI33640.1| Probable ATP-dependent RNA helicase DHX58 [Salmo salar]
Length = 678
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 236/518 (45%), Gaps = 57/518 (11%)
Query: 25 YQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
YQ E ++ AL+ +N I++L TG GKT A+ + + + L P VAV LV KV LV Q
Sbjct: 9 YQEEVVQRALRGENVIIWLPTGGGKTRAAVYVAKKH--LENNPGAKVAV-LVNKVHLVDQ 65
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDF----WDGATWKEE-----MSKHEVLVMTPQILLDGL 134
L + ++ +G+D+ G +++ + ++++ T QIL + L
Sbjct: 66 ----------LYINEFKPFLGLDYSLVSISGDCDQKDFFGCNVKNSDLVICTAQILENAL 115
Query: 135 ----RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP 190
+ +L+ +LI+DECHH + Y IM + + L+ G+ LP+I G+TASP
Sbjct: 116 TNQEEGKHVELSQFTLLIIDECHHTHKEGVYNKIMGRYVAQKLK-GERRLPQILGLTASP 174
Query: 191 IKSKVSS---SEQDYWQKIHDLET-LMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP 246
S + + Q +L++ +++SKVY A E L +P +F D+ P
Sbjct: 175 GTGGAKSIKGAVEHVLQICANLDSVIVSSKVY--APE--LKKKVPRPRKRFDIV--DKRP 228
Query: 247 HALY-THLADELAMIE----LKHTRSLENLDLNEAQAELI---RKKVSKINSTLLYCLSE 298
+ HL + I L E +A+++ +K V+ N L C
Sbjct: 229 QDPFGDHLKFMMQFIHDFMALGPDFPFREFGTQEYEADVVILEKKGVTDRNRLLAQCALH 288
Query: 299 LGVWL-ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
L + AL +T+ + A+ L+ + T D + + + E +
Sbjct: 289 LRQYNDALLINDTVRMVD----AFRVLESYYSTK-SSTAMDGTDFFLLGLYQENEVEL-- 341
Query: 358 DSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHC 415
K + D+ K+ L +LLE + + R I+F + R T + + + +
Sbjct: 342 -RKLSGDARFENPKMGKLQNTLLEQFDQGKPSRGILFSKTRKSTHCLYDWVSNNPALQRA 400
Query: 416 TWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDP 475
+ + G +GI ++ +Q E + FRRG +N++++TS+ EEGLD+ CNLV+ +
Sbjct: 401 GIRAAILTGAGNGINYMTQNEQKETIRTFRRGSLNLLISTSVAEEGLDIPECNLVVRYGL 460
Query: 476 SRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+ Q+ GRAR +S Y ++ ++G + L N
Sbjct: 461 LTNEIAQQQASGRARASDSVYSVVAQAGGREVRRELLN 498
>gi|390463706|ref|XP_003733083.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Callithrix
jacchus]
Length = 578
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 228/532 (42%), Gaps = 87/532 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT R+ AY+ R+ + KV LV
Sbjct: 4 RPYQQEVITPALEGKNIIIWLPTGAGKT-------RAAAYVARQ---HLETVDGAKVHLV 53
Query: 82 PQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL----R 135
Q E D + + GDMG A + H++L+ T ++L L
Sbjct: 54 TQHGEEFSRMLDGRWTMTTLSGDMG----PRAAFGHLARCHDLLICTAKLLQMALTSPEE 109
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI---K 192
+ +L ++++DECHH Y IM+++ L+ LP++ G+TASP
Sbjct: 110 EEHVELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARP-LPQVLGLTASPGTGGA 168
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDEIPHA 248
SK+ + Q +L+T + C + N P + + ++
Sbjct: 169 SKLDGAINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCKQYDLCQRRSQDPFGDLLKK 228
Query: 249 LYTHLADELAMIEL-----KHTRSLENLDLNE--AQAELIRKKV-----SKINSTLLYCL 296
L + D L M EL K T + + L+E A A L+ ++V + N LL
Sbjct: 229 LMDQIHDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVYALHLRRYNDALL--- 285
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW--S 354
+ ++A + ++ + +F+ E A T + W +
Sbjct: 286 ----IHDTVRAVDALAALQ-NFYQREH------------------ATKTQILCAERWLLA 322
Query: 355 IGDDSKFNL----DSGLLTEKIVCLIESLLE--YRGVEDIRCIIFVERVITAIVLQSLLS 408
+ +D K L GL K+ ++E +L+ +R + R IIF +A SLL
Sbjct: 323 LFNDHKDMLAHLATHGLENPKLE-MLEKILQKQFRSSDSPRGIIFTRTRQSA---HSLLL 378
Query: 409 ELLPRHCTWKTKYI-------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEG 461
L + +T I +GN+S ++K Q E++ +FR G +N++VATS+ EEG
Sbjct: 379 -WLQQQPGLQTVDIRPQLLIGSGNSSQRTHMTQKDQQEVIRKFRDGTLNLLVATSVAEEG 437
Query: 462 LDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
LD+ CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 438 LDIPQCNVVVRYGLLTNEISMVQARGRARAGESVYSFVATKGSRELQRELIN 489
>gi|395826384|ref|XP_003786398.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 3
[Otolemur garnettii]
Length = 578
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 225/539 (41%), Gaps = 101/539 (18%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT R+ AY+ ++ + KV LV
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKT-------RAAAYVAKR---HLETVDRAKVHLV 53
Query: 82 PQQAEAIKMHTDLKVGKYW-----GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL-- 134
Q E + D G++ GDMG A + H++L+ T ++L +
Sbjct: 54 TQHGEEFRRMLD---GRWSMVTLSGDMG----SRAGFGHLARSHDLLICTAELLQTAMTS 106
Query: 135 --RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ +L +L++DECHH Y I++ + L+ S LP++ G+TASP
Sbjct: 107 PEEEEHVELTAFSLLVVDECHHTHKDTVYNVILSRYLEHKLQRAPS-LPQVLGLTASPGT 165
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP------ 246
S L+ +N + CA+ P S+ + ++Y++ P
Sbjct: 166 GGASK-----------LDGAINHILQLCANLDTWCIMSPQSSCS-QLHEYNQQPCKQYDI 213
Query: 247 -------------HALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKV- 285
L + D L M EL + + + +L + A+ L ++V
Sbjct: 214 CHRRSQDPFGDLLKKLMDQVHDRLDMPELSRDFGMQIYEQQMVDLSRDAAENGLQERRVY 273
Query: 286 ----SKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG----FGETIIKKFGS 337
+ N LL + ++A + ++ + DF+ E+ + E +
Sbjct: 274 ALHLRRYNDALL-------IHDTVRAVDALATLQ-DFYNRERTTKTQVLYAERWLLALFD 325
Query: 338 DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-R 396
D AL G E + K + +L E ++ R IIF R
Sbjct: 326 DNKNALAHLATHGPE-----NPKLEVLERILQE----------QFGKPNSPRGIIFTRTR 370
Query: 397 VITAIVLQSLLSELLPRHCTWKTKYIAGN-NSGIQCQ-SRKKQNEIVEEFRRGLVNVIVA 454
+L L + + K + + G+ NSG + +++ Q E++++FR G++N++V+
Sbjct: 371 QSAHSLLLWLQQQPGLQMVDIKAQMLIGSRNSGQRAHMTQRNQQEVIQKFRIGILNLLVS 430
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
TS+ EEG+D+ CN+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 431 TSVAEEGMDIPHCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAEGSRELRRELIN 489
>gi|238492895|ref|XP_002377684.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220696178|gb|EED52520.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 790
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 70/434 (16%)
Query: 945 FVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFH---LESLET 1001
PSI+HR+ L+A L+ + + Q + +L +D H S+
Sbjct: 348 LAPSIIHRIGVYLIAEKLRKQIFSNP-QAARFERMDLL--CIALSPTDDMHRPEFRSMAF 404
Query: 1002 LGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPK 1061
+GD+ +K+ ++QLF + HEGLL+ K+ I+S+ L C ++ T F+ K
Sbjct: 405 IGDAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFNGK 464
Query: 1062 MWIIPGDNSGSYELNDDSLFNGRKIYVTG---RKKVKSKTVADVVEALIG-AFLSTGGEN 1117
W F + +G R+ V + TVAD+V+AL G AFL G +
Sbjct: 465 RW--------------RPFFVSTTLSKSGPTRRRYVGAATVADMVKALAGAAFLDNGLDQ 510
Query: 1118 -----VGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEAL 1172
+I + + + Y + + + LE+LL Y+F D SL +E++
Sbjct: 511 AFICAAAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSDKSLAIESM 570
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNN----- 1227
TH S + Y+RL FLG +++ ++ YL+ + S L ++SA NN
Sbjct: 571 THPSCVGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAF 630
Query: 1228 ----------------DCYALSSV-----KHGLHKHILHASHELYKRINITVDSF----- 1261
D + SV + L+ + S L +++ V+
Sbjct: 631 LCLTFHWEKQHDIIEVDSMGIPSVIQTRGRVALYHFLRSQSDSLSDKVSSLVEDLTSQLH 690
Query: 1262 ---EKLSLGSTFGWESVTSFP--KALGDIIESLAGAIFVDSGCN---REVVFQ--SIRPL 1311
L + W ++ F K DI++S+ GAI++DS + E + + I PL
Sbjct: 691 VIKRDLWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDSLASLQQSEALAERLGILPL 750
Query: 1312 LEPMITPETMRFHP 1325
LE I+ + + HP
Sbjct: 751 LEHFISHDVVTDHP 764
>gi|403304472|ref|XP_003942820.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 2
[Saimiri boliviensis boliviensis]
Length = 578
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 227/539 (42%), Gaps = 101/539 (18%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT R+ AY+ R+ + KV LV
Sbjct: 4 RPYQREVITPALEGKNIIIWLPTGAGKT-------RAAAYVARQ---HLETVDGAKVHLV 53
Query: 82 PQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL----R 135
Q E D + + GD+G A + H++L+ T Q+L L
Sbjct: 54 TQHGEEFSRMLDGRWTMTTLSGDVG----PRAGFGHLARCHDLLICTAQLLQMALTSPEE 109
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
+ +L ++++DECHH Y IM+ + L+ LP++ G+TASP
Sbjct: 110 EEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARP-LPQVLGLTASPGTGGA 168
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVL-----SNFIP----FSTAKFKFYK----- 241
S L+ +N + CA+ N+ P S K Y
Sbjct: 169 SK-----------LDGAINHVLQLCANLDTWCIMSPQNYFPQLQEHSQQPCKQYDLCQRR 217
Query: 242 ----YDEIPHALYTHLADELAMIEL-----KHTRSLENLDLNE--AQAELIRKKV----- 285
+ ++ L + D L M EL K T + + L+E A A L+ ++V
Sbjct: 218 SQDPFGDLLKKLMDQIHDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVYALHL 277
Query: 286 SKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT 345
+ N LL + ++A + ++ +S F+ E A T
Sbjct: 278 RRYNDALL-------IHDTVRAVDALAALQS-FYQREH------------------ATKT 311
Query: 346 YVPSGAEW--SIGDDSKFNLDSGLLTEKI----VCLIESLLE--YRGVEDIRCIIFVE-R 396
+ W ++ +D K N+ + L T + + ++E +L+ +R + R IIF R
Sbjct: 312 QILCAERWLLALFNDHK-NVLAHLATHGLENPKLEMLEKILQKQFRSSDSPRGIIFTRTR 370
Query: 397 VITAIVLQSLLSELLPRHCTWKTKYI--AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVA 454
+L L + R + + + +GN+S ++K Q E++ FR G +N++VA
Sbjct: 371 QSAHSLLLWLQQQPGLRTVDIRAQLLIGSGNSSQSTHMTQKDQQEVIRNFRSGTLNLLVA 430
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
TS+ EEGLD+ CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 431 TSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGQSVYSFVATKGSRELQRELIN 489
>gi|301619410|ref|XP_002939087.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Xenopus
(Silurana) tropicalis]
Length = 624
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 224/509 (44%), Gaps = 53/509 (10%)
Query: 24 NYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
+YQ E + AL+ +N I++L TG+GKT A+ + + + R F+V KV LV
Sbjct: 5 DYQWEVIAPALEGKNIIIWLPTGAGKTRAALYVAMRHLEMKRNAK---VAFIVNKVHLVD 61
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS----Y 138
Q + + LK + D + ++ ++V++ T QIL + L +
Sbjct: 62 QHF-SNEFQPHLKDKYTVVAISGDTEHKCFFAQKTQDNDVIICTAQILQNALSSGSEEMH 120
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
+L +LI+DECHH Y +M + R + LP+I G+TASP + +S
Sbjct: 121 VELTDFTLLIIDECHHTHKDGVYNKLMEGYLERKI-CRKGKLPQILGLTASPGTGRATSF 179
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELA 258
+ H L+ N + S V + + AK +YD + D+L
Sbjct: 180 HKAVE---HILQICANLDTWRIMSAEVHREDLE-AKAKQPNKQYDLVAQRTRDPFGDKLK 235
Query: 259 MIELKHTRSLENLDLNEAQ----------AELIRKKVSKINSTLLYCLSELGVW----LA 304
+ L + +E++ EL ++ + + C L + L
Sbjct: 236 ELMKTIHGYLRTAEFSESEFGTQVYEQKVVELEKEGAVEADRMKRTCALHLRKYNDSLLV 295
Query: 305 LKAAETISCYE--SDFFAWE-----QLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGD 357
YE ++F+ E Q D +I+ F D +QA + +
Sbjct: 296 HDTVRMTDAYELLAEFYVTEKFIRKQNDPTDTFLIQLF--DRNQATLL--------ELAH 345
Query: 358 DSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLS-ELLPRHCT 416
DS+F ++ LT K+ +++ ++ V R IIF + L + +S + +
Sbjct: 346 DSRF--ENPKLT-KLEEILKDQFQFSSVS--RGIIFTRTRQSTHSLHNWISGKDYFQKMG 400
Query: 417 WKTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD 474
KT + G Q + ++ +Q E++E+FR+G +N++V+TS+ EEGLD+ CN+V+ +
Sbjct: 401 IKTAPLTGAGYSNQSKHMTQNEQREVIEKFRKGELNLLVSTSVAEEGLDIPQCNVVVRYG 460
Query: 475 PSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
+ +Q+RGRAR ++S Y + KSG
Sbjct: 461 LMTNEIAMVQARGRARHEDSCYSFLAKSG 489
>gi|301773535|ref|XP_002922173.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like
[Ailuropoda melanoleuca]
gi|281344530|gb|EFB20114.1| hypothetical protein PANDA_011148 [Ailuropoda melanoleuca]
Length = 684
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 226/531 (42%), Gaps = 78/531 (14%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TG+GKT R+ AY+ ++ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIMWLPTGAGKT-------RAAAYVAKRHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E D + + GDMG A + H++++ T ++L L
Sbjct: 57 VHLVSQHCEEFSRMLDNRWAITTLSGDMG----PRAGFGHLARSHDLIICTAELLQLALA 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-HRLLETGDSNLPRIFGMTASP 190
+ +L+ +L++DECHH Y I++++ H+L T LP++ G+TASP
Sbjct: 113 SPEEEEHVELHAFSLLVVDECHHTHKDTVYNVILSQYLQHKLQRT--RPLPQVLGLTASP 170
Query: 191 IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESV----LSNFIPFSTAKFKFYK----- 241
S+ E H L+ N + S L P ++
Sbjct: 171 GTGGASTLEGAV---DHILQLCANLDTWRIVSPQTYRRHLQEHSPQPCKQYNLCHRRSLD 227
Query: 242 -YDEIPHALYTHLADELAMIELKHTRSLEN-----LDLNEAQAE--LIRKKVSKINSTLL 293
+ + L + D L M EL +N ++L++A AE L +++V ++ L
Sbjct: 228 PFGDTLKKLMDRIHDCLKMPELSQDYGTQNYEQQVVELSQAAAEAGLQQRRVCALH--LR 285
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
L V ++A + + DF+ D + T V W
Sbjct: 286 RYNDALLVHDTVRAVDALDSLR-DFY------------------DRERTTKTQVLQAERW 326
Query: 354 --SIGDDSKFNLDSGLLT-----EKIVCLIESLLEYRGVEDI-RCIIFVE-RVITAIVLQ 404
++ DD K L + L T K+ L + L E G D R IIF + R T +L
Sbjct: 327 LLALFDDYKNEL-AHLATCSPENPKLEMLEQILREQFGSSDSPRGIIFTQTRQSTHSLLL 385
Query: 405 SLLSELLPRHCTWKTKYIAGNNSGIQC--QSRKKQNEIVEEFRRGLVNVIVATSILEEGL 462
L + + + + G + Q +++ Q E++ +FR G +N++VATS+ EEGL
Sbjct: 386 WLQQQPGLQTVDIRADLLIGAGTSSQNTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGL 445
Query: 463 DVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
D+ CN+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 446 DIPQCNVVVRYGLLTNEISMVQARGRARAGQSIYSFVANQGGRELRRELTN 496
>gi|189182361|gb|ACD81882.1| dicer-like nuclease 1 [Chlamydomonas reinhardtii]
Length = 2236
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 390 CIIFVERVITAIVLQSLLSELLP------RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
++F +R + + L LL+EL R + AG+++ +KQ +
Sbjct: 701 AMVFCQRKVACVALHRLLTELPAARGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRA 760
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
F G +NV+++TS+ EGLD ++CN VIM DP V F+Q GRAR S YLL +
Sbjct: 761 FSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQCAGRARAPGSCYLLFARD- 819
Query: 504 DSTTQ-----SRLE-NYLASGNKMRKEVLSHAS--LPCSPLNNHMYGED----------- 544
D Q SR E + +A K+ A P N + +D
Sbjct: 820 DRQQQAIAKRSREEADMVAKALKLSTAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQN 879
Query: 545 FYHVESTGTIATLSSSVSLIYFYCSRLP---SDGYFKPTPKFH------INKEMGICTLY 595
+ V TG + + +L+ YC LP D +P + ++ + T++
Sbjct: 880 LFRVPHTGAVMCGPLAQNLLESYCRTLPGNSGDVLLQPYYSYQEYESPLTRRKAFVATVH 939
Query: 596 LPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+P N P+ V Q N +Q AC+ ++L+++GAL ++LLP
Sbjct: 940 MPANSPLGVVEGPMQSNKGDARQHACMATVRRLYELGALDEHLLP 984
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 18 TLPFARNYQLEALENALKQ-NTIVFLETGSGKTLIAI-MLLRSYAYLLRKPSPFVAVFLV 75
LP R YQ E L A + +T+++ ETG+GKT IA+ +L ++ L+ + +A FL
Sbjct: 4 ALPPLREYQAELLRMARRHASTVIYAETGTGKTRIAVERILEAHGELVA--AGRLAAFLA 61
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P V LV QQAE + + L+V Y G+ D + A W+ + +VL TP L +
Sbjct: 62 PTVPLVRQQAEVL-VAAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIA 120
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
++ + + +++ DECHH H YA ++ F L T P + G+TASP K+
Sbjct: 121 HAFITIPQLGMIVFDECHHTNANHPYAVLLRVFVRHL--TPPDQRPVLLGLTASPHKA 176
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 26/134 (19%)
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQN---NHEGLLSVKKERIISNAALCKLGCEQKLP 1050
F E LETLGD+ LKY A+ ++ T ++ +HEG++S K++++++N AL E L
Sbjct: 1591 FDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGLQ 1650
Query: 1051 GFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR-----KKVKSKTVADVVEA 1105
+R +D + + GR + TG ++V+ K +AD VEA
Sbjct: 1651 HHMRALPYD-----------------MERVLRGRH-WNTGEEAARAQEVRGKRLADCVEA 1692
Query: 1106 LIGAFLSTGGENVG 1119
L+G L+ G G
Sbjct: 1693 LVGCHLAPGVPTAG 1706
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRC-----------------YQRLEFLGDAVLDYLIT 1202
Y F DP+L + ALTH S+ +P + YQ LEFLGDAV+ L +
Sbjct: 1842 YQFHDPALALCALTHVSWPVPPVSSSGKGLDAGAGSGGGSGGHYQLLEFLGDAVVGLLAS 1901
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
++ Y+ G SP ++ R V ND A
Sbjct: 1902 LWAYSL--GGSPRDMSMTREMLVRNDTLA 1928
>gi|169665428|gb|ACA63429.1| dicer-like 1 protein [Chlamydomonas reinhardtii]
Length = 2243
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 390 CIIFVERVITAIVLQSLLSELLP------RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
++F +R + + L LL+EL R + AG+++ +KQ +
Sbjct: 701 AMVFCQRKVACVALHRLLTELPAARGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRA 760
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
F G +NV+++TS+ EGLD ++CN VIM DP V F+Q GRAR S YLL +
Sbjct: 761 FSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQCAGRARAPGSCYLLFARD- 819
Query: 504 DSTTQ-----SRLE-NYLASGNKMRKEVLSHAS--LPCSPLNNHMYGED----------- 544
D Q SR E + +A K+ A P N + +D
Sbjct: 820 DRQQQAIAKRSREEADMVAKALKLSTAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQN 879
Query: 545 FYHVESTGTIATLSSSVSLIYFYCSRLP---SDGYFKPTPKFH------INKEMGICTLY 595
+ V TG + + +L+ YC LP D +P + ++ + T++
Sbjct: 880 LFRVPHTGAVMCGPLAQNLLESYCRTLPGNSGDVLLQPYYSYQEYESPLTRRKAFVATVH 939
Query: 596 LPNNCPIQTVIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
+P N P+ V Q N +Q AC+ ++L+++GAL ++LLP
Sbjct: 940 MPANSPLGVVEGPMQSNKGDARQHACMATVRRLYELGALDEHLLP 984
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 18 TLPFARNYQLEALENALKQ-NTIVFLETGSGKTLIAI-MLLRSYAYLLRKPSPFVAVFLV 75
LP R YQ E L A + +T+++ ETG+GKT IA+ +L ++ L+ + +A FL
Sbjct: 4 ALPPLREYQAELLRMARRHASTVIYAETGTGKTRIAVERILEAHGELVA--AGRLAAFLA 61
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P V LV QQAE + + L+V Y G+ D + A W+ + +VL TP L +
Sbjct: 62 PTVPLVRQQAEVL-VAAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIA 120
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
++ + + +++ DECHH H YA ++ F L T P + G+TASP K+
Sbjct: 121 HAFITIPQLGMIVFDECHHTNANHPYAVLLRVFVRHL--TPPDQRPVLLGLTASPHKA 176
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 26/134 (19%)
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQN---NHEGLLSVKKERIISNAALCKLGCEQKLP 1050
F E LETLGD+ LKY A+ ++ T ++ +HEG++S K++++++N AL E L
Sbjct: 1591 FDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGLQ 1650
Query: 1051 GFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR-----KKVKSKTVADVVEA 1105
+R +D + + GR + TG ++V+ K +AD VEA
Sbjct: 1651 HHMRALPYD-----------------MERVLRGRH-WNTGEEAARAQEVRGKRLADCVEA 1692
Query: 1106 LIGAFLSTGGENVG 1119
L+G L+ G G
Sbjct: 1693 LVGCHLAPGVPTAG 1706
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRC-----------------YQRLEFLGDAVLDYLIT 1202
Y F DP+L + ALTH S+ +P + YQ LEFLGDAV+ L +
Sbjct: 1842 YQFHDPALALCALTHVSWPVPPVSSSGKGLDAGAGSGGGSGGHYQLLEFLGDAVVGLLAS 1901
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
++ Y+ G SP ++ R V ND A
Sbjct: 1902 LWAYSL--GGSPRDMSMTREMLVRNDTLA 1928
>gi|123402170|ref|XP_001302001.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121883246|gb|EAX89071.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 790
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 221/509 (43%), Gaps = 83/509 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ + + K NT+V L TGSGKT IA +++ ++ R + +F LV
Sbjct: 58 RDYQFQISQLCFKYNTLVCLPTGSGKTFIAAVVIMNF---YRWYPNSIIIFCATTRALVE 114
Query: 83 QQAEAIKMHTDLK-------VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
QQ +A M T + +G ++ D W + V+ TPQ + + ++
Sbjct: 115 QQIDACNMFTTIPDSDTIALLGTTHSNIRKDLW---------KTYRVVYATPQTVQNDIK 165
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
I ++I DE HHAR +H Y+ I R++ +S RI G++A+P K
Sbjct: 166 KGRLDPCRISLIIFDEAHHARHRHAYSMIT-----RMVAERNSQF-RIIGLSATPGK--- 216
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD-EIPHALYTHLA 254
D+E++ S VY ++ + + K Y+++ +I
Sbjct: 217 ------------DIESIQ-SVVYNLMISKII--YKDSNDPDIKQYQHNTDIEIITVKAGG 261
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
DE A+ +L +D + A +K +N + ++ LS V+ ++ ++
Sbjct: 262 DEDALTKL--------MDQSIAYIATPLQKAGFLNVSDVHFLSRGAVYANMEKFKS-GPR 312
Query: 315 ESDFFAW--------------EQLDGFGETII--------KKFGSDASQALVTYVPSGAE 352
FF + E+L +G T + KK + ++L++Y P +
Sbjct: 313 SGLFFKYMNHFSLLLSLTSMKEKLQKYGPTFLDKALKEFDKKKQTAERKSLMSYPPFISL 372
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+ ++K L+ K+ ++E + + RCI+F A L+S + ++
Sbjct: 373 IKMTSNAKNTSHPKLV--KLTLILEDF--FAKNSESRCIVFTNFRDVAKDLESHIKQIPN 428
Query: 413 RHCT-WKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVI 471
C+ + K + + G+ + K Q IV FR+G +N+I+AT + EEGLD+ +L+I
Sbjct: 429 VKCSVFTGKAVTNTDEGL---NEKVQQAIVGLFRKGNINLIIATCVAEEGLDIGEVDLII 485
Query: 472 MFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+D + +Q GR + + +++ +
Sbjct: 486 CYDTQSSPLRTVQRMGRTGRKRAGHVIFL 514
>gi|259489686|tpe|CBF90161.1| TPA: RNA helicase/RNAse III, putative (AFU_orthologue;
AFUA_5G11790) [Aspergillus nidulans FGSC A4]
Length = 411
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 171/387 (44%), Gaps = 47/387 (12%)
Query: 69 FVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQ 128
+++FLV V L +QA ++ + D+ VG+ +G +G D W TW E + K+ V+V T +
Sbjct: 41 MISIFLVDSVTLSYKQAGVLRNNLDMNVGRIFGALGFDLWSRQTWTEFLEKYMVVVCTAE 100
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
+L L ++ ++ I +L+ DE HH + H A I+ + Y T S PR+ GMTA
Sbjct: 101 VLYQCLLHAHIRMEQINLLVFDEAHHTKKDHVCARIIRDSY---FPTAQSKRPRVLGMTA 157
Query: 189 SPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA 248
SP+ +K D Q +LE ++SK+ T + S++ + K + + YD + +
Sbjct: 158 SPVDTK-----GDVAQAAMNLELYLDSKIATASQLSLVHQVV--RRPKEEAWIYDRLEQS 210
Query: 249 LYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAA 308
T E+ + +E+L L V + + ELG W +
Sbjct: 211 FGT----EIYRLMEGRLGDIEDLKL-----------VFRFAWQASF---ELGRW----CS 248
Query: 309 ETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLL 368
+ + Y +L+G + + + DAS+ +Y+ E + G
Sbjct: 249 DGVLKYVFSAKMLPKLEGKSKELSQL--RDASEVASSYILGSPE-----------EPGQS 295
Query: 369 TEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNN 426
+ K+ L L E YR + R ++F R T ++L L + L +P + N+
Sbjct: 296 SHKVQVLRRRLTEHYRETPETRSLVFTTRRYTTLMLLELFNALEMPHLRPGLLIGVQAND 355
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIV 453
S ++Q ++ FR G +N ++
Sbjct: 356 FAGPEISCREQFLAIDRFRSGEINCLI 382
>gi|297794785|ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
gi|297311112|gb|EFH41536.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
Length = 786
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 38/200 (19%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +LNYSF++ +LL EA+T PR ++RLEFLGD+VL+ + Y+++ YP L
Sbjct: 7 VEKILNYSFKNKTLLKEAITLS-------PR-FKRLEFLGDSVLEVALANYIHHAYPNLK 58
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHIL-HASHELYKRINITVDSFEKLSLGSTFGW 1272
L D+R+A+VNN+ +A ++VKH L++ I+ S ++I ++ K + +G
Sbjct: 59 LQELCDLRTANVNNEKFARATVKHNLYQFIIGEKSSSPSEKIKEFSEAVSKEDVPVPYG- 117
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCN---------------------------REVVF 1305
+ PK LGDI+ES+AGA+++D + RE
Sbjct: 118 -GLVEAPKVLGDIVESIAGAVYIDVDFDVQRFWEVCCVCLFFITFVFLISMLLIKREEFL 176
Query: 1306 QSIRPLLEPMITPETMRFHP 1325
Q R LLEP+ T + ++ P
Sbjct: 177 QIFRGLLEPIYTLDDLQMQP 196
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 49/265 (18%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V+ +E +LNY F + +LL EAL S + +Q+L F+G A L IT ++Y +Y
Sbjct: 471 SVKAVEKILNYVFTNKNLLKEALRQTSSL-------FQKLRFVGRAALVLAITNHIYLRY 523
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL----- 1264
P P L ++ + N A +VKH +H+ + K +++F K+
Sbjct: 524 PNFEPRELELLQRGNTCNKTLARVAVKHNIHQFFIGQFKSEKK-----IEAFSKVVGKED 578
Query: 1265 -SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRF 1323
+ S E T+ L D++ES+AGA+++D + + +++S R L EP+ T + +R
Sbjct: 579 DPVPSDGRSERTTN---VLSDLVESVAGAVYIDMNFDIKRLWESFRGLFEPLYTLDDLRL 635
Query: 1324 HPVRELTEYC----QKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDA------- 1372
P T C HF + E + + R H +LD
Sbjct: 636 RPQPIHTLSCLGDKDGKHFDFR--------------YEEKGSNRYKAHVYLDDKLIASGK 681
Query: 1373 ---DKKTAKKVACKEVLKSLRASFP 1394
+ AK A E ++ L S P
Sbjct: 682 KKNSRDDAKMSAAMEAVRKLSESMP 706
>gi|157123248|ref|XP_001660079.1| hypothetical protein AaeL_AAEL009460 [Aedes aegypti]
gi|108874431|gb|EAT38656.1| AAEL009460-PA [Aedes aegypti]
Length = 1557
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 236/545 (43%), Gaps = 75/545 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ ++ AL +NT+V L TG GKT IA +++ Y P+ V +F+ P LV
Sbjct: 80 RKYQYSIVQAALFKNTLVVLPTGLGKTFIAAVVM--YNLYRWYPTGKV-IFMAPTRPLVN 136
Query: 83 QQAEAI-------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
QQ EA K T GK W V +TPQ++L +
Sbjct: 137 QQIEACYKIMGIPKEDTAEMTGKQQRKNRTGLWQS---------KRVFYVTPQVVLADIN 187
Query: 136 L--SYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
F +N +K++++DE H A+G++ Y ++ + + + + N R+ ++A+P ++
Sbjct: 188 SPEQNFPINEVKLVVVDEAHKAKGRYAYTEVI-----KAIASTNRNF-RVLALSATPGRT 241
Query: 194 KVSSSEQDYWQKIHDL---------ETLMNSKVYTCASESVLSNFIPFSTAKFKFYK-YD 243
+D + I +L E ++ YT +++ + IP + + Y
Sbjct: 242 L-----EDVAEVIKNLLISHIEVRWENSIDVSPYTF-KKNIRTVVIPLGPNLSRIREHYL 295
Query: 244 EIPHALYTHLADELAMIELKHTRSL-------ENLDLNEAQAELIRKKVSKINSTLLYCL 296
+I L D A + H SL E E + INS + C+
Sbjct: 296 QILDPYVRRLLD--ANVISGHVGSLSRGWLIMEQKRFRETNLIQRHPNYTAINSDFITCV 353
Query: 297 S-----ELGVWLALKA------AETISCYESDFFAWE-QLDGFGETIIKKFGSDASQALV 344
S EL V ++A E E F A + +L F + + +++G + A+
Sbjct: 354 SMYHALELLVRHGVRAFLNFFEDEHNRTEEKYFVAKDPRLKAFLDELREEYGRNP-LAIF 412
Query: 345 TYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVL 403
P+ A +G + D G K L +L E ++ D + IIF E + ++
Sbjct: 413 GGDPATANGMVGQPKEEVTDFG--HPKFAILERNLKEHFQNNPDSKVIIFCEYRESVAMI 470
Query: 404 QSLLSELLPRHCTWKTKYIAGNNS---GIQCQSRKKQNEIVEEFRRGLVNVIVATSILEE 460
Q LL + P K K I G G++ ++K+Q +++FR G N ++AT + EE
Sbjct: 471 QRLLLQNRP---LIKPKCIVGQGGTAGGLRAVTQKEQIAAMKDFRSGACNTLIATCVAEE 527
Query: 461 GLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNK 520
G+DV +L++ FD ++ F+Q GR Q +LM+ + + L+ +AS +K
Sbjct: 528 GIDVGEVDLIVCFDIAKNPTRFVQRIGRTGRQRVGRVLMLVT-EGKEHDTLKEVMASKDK 586
Query: 521 MRKEV 525
+++
Sbjct: 587 TNQKL 591
>gi|256810024|ref|YP_003127393.1| Hef nuclease [Methanocaldococcus fervens AG86]
gi|256793224|gb|ACV23893.1| ERCC4 domain protein [Methanocaldococcus fervens AG86]
Length = 767
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 231/525 (44%), Gaps = 79/525 (15%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ NALK+ T+ L TG GKT IAI+++ A +L K V + L P LV
Sbjct: 15 ARLYQQIIAANALKKKTLCVLSTGLGKTAIAILVI---AGILTKKDGKVLI-LAPSRPLV 70
Query: 82 PQQAEAIK--MHTDLKV-----GKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q +K ++ D + GK + + + K ++ V TPQ++ + +
Sbjct: 71 EQHCNRLKDVLNIDENMIIALTGKISPNKRAELY---------KKGKIFVATPQVIENDI 121
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
++ +LI DE HH G H YA + +F + + G+TASP
Sbjct: 122 IAGRINIDDFVLLIADEAHHTTGDHAYAFVAKKFKDKC---------HVLGLTASP---- 168
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
S+ D +I + + + +V T E V + E AL L
Sbjct: 169 --GSDIDKVMEICENLGIEHVEVRTEDDEDVKPYVAKVKLTPIRIELPPEFKKAL--KLI 224
Query: 255 DELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCY 314
+E LK L++ + + A + + ++ ++N+ L E+ L +E +
Sbjct: 225 NEALKERLK---ILKDFGVINSIANVTKTELIELNNKLFSYDEEVKYELIRVCSEALKL- 280
Query: 315 ESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE---- 370
A E L+ G+T+ + + S + + SI +D K LL E
Sbjct: 281 ---MHAKELLESQGKTVFLSYINKLSMQ-----RTKSAKSISNDEKIREAVNLLMESNVE 332
Query: 371 -----KIVCLIESLLEYRGVEDIRCIIF------VERVITAIVLQSLLSELLPRHCTWKT 419
K+V +++++LE +D R I+F VE+++ LL ++
Sbjct: 333 HPKLEKVVDMVKNILEKN--KDERIIVFAQYRDTVEKIVN----------LLHQNGIKAI 380
Query: 420 KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
++I N + S+K+Q E +E+F+R +V+V+TS+ EEG+D+ + N +I ++P +
Sbjct: 381 RFIGQANKEGKGMSQKQQIEAIEKFKRE-GSVLVSTSVSEEGIDIPTVNYIIFYEPVPSE 439
Query: 480 CSFIQSRGRA-RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK 523
FIQ RGRA R + +++ G +T ++ + L +M++
Sbjct: 440 IRFIQRRGRAMRGEGGKAYILIAKG-TTDEAYYRSALYKEREMKR 483
>gi|242033787|ref|XP_002464288.1| hypothetical protein SORBIDRAFT_01g015663 [Sorghum bicolor]
gi|241918142|gb|EER91286.1| hypothetical protein SORBIDRAFT_01g015663 [Sorghum bicolor]
Length = 255
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 20/239 (8%)
Query: 649 KRGN--EPYNAEHPIYFPPELVNQSPQDTKIT-YHCYLI--ELKQHFNYDISARNIVLAM 703
KRGN E Y P+YFP ELV+ ++ Y+CY I L+ N NI+LA+
Sbjct: 26 KRGNAEEKYQHGQPVYFPEELVDNWVSFSRHGLYYCYSINISLQGSCNTAADPTNIILAV 85
Query: 704 RTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVLLCRRFQITLFRVIMDHNLDK 763
+ ++ + +F+ G + + +K+L +I L QV+ RRFQ T+ ++++ + +
Sbjct: 86 KCDMGPDFFWHSFN----SGGIGITIKYLCKIHLNQEQVIFARRFQTTVLSLLINSDHLE 141
Query: 764 LNEILDGF-ELRDNLEIDYLLLPSTGQLIDW-----KTVATVLFPRDNGSKHNMNCSTMF 817
+++ + F EL+ ++ + YLLLP+ IDW T + D ++H+ +C
Sbjct: 142 VSDAIKYFHELQVDVGVVYLLLPTVYGKIDWCGIKFSTSSVYDDVTDKNTRHSHSCK--- 198
Query: 818 NARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNANSLFTRNNGSVTTYKKH 876
+A I+ T GP C C + NS+V P + +IY IT + LNAN NN S + K++
Sbjct: 199 DADILQTMDGPCCRCILQNSVVYAPCDKKIYNITEL--DLNANQPLDLNNRSAVSCKRY 255
>gi|432867922|ref|XP_004071339.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Oryzias
latipes]
Length = 681
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 226/519 (43%), Gaps = 54/519 (10%)
Query: 25 YQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
YQ E +E ALK +N I++L TG GKT A+ + + + L + V LV V LV Q
Sbjct: 9 YQEEVVERALKGENIIIWLPTGGGKTRAAVYVAKRH---LETTANAKVVVLVNMVHLVDQ 65
Query: 84 Q-AEAIKMHTDLKVGKYWGDMGV-------DFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
++ K H +G + + V DF+ + +++V++ T QIL + L
Sbjct: 66 HYSKEFKPH----LGSLYNLIKVSGVSEEKDFFGKV-----VQRNDVIICTAQILYNALI 116
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +L+ I +LI+DECHH + Y +M + + L+ G+ LP+I G+TASP
Sbjct: 117 DKEEAKHVELSDITLLIIDECHHTHKEAVYNKVMRCYMEKKLK-GERQLPQILGLTASPG 175
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA--L 249
E + L ++ V T E L +P F E HA L
Sbjct: 176 TGGARILEDAVEHVLEICANLDSAIVSTKNYEPELMKKVPRPVKTFDIV---EKRHADPL 232
Query: 250 YTHLADELAMI----ELKHTRSLENLDLNEAQAELI---RKKVSKINSTLLYCLSELGVW 302
HL + I L L E +A+++ ++ V + N + C L +
Sbjct: 233 GDHLKWMMLQIHDFMNLPRDARLRQCGTQEYEADVVILEQRGVRENNRLVAQCALHLRQY 292
Query: 303 -LALKAAETISCYESDFFAWEQLDGF--GETIIKKFGSDASQALVTYVPSGAEWSIGDDS 359
AL +T+ + A+ L+ F +T G+D ++ E + +
Sbjct: 293 NDALLINDTLRMMD----AYRSLEEFYDSKTTTAMDGTD------FFLLGLFEENQVELR 342
Query: 360 KFNLDSGLLTEKIVCLIESLLEYRGVE-DIRCIIFVE-RVITAIVLQSLLSELLPRHCTW 417
K DS + L LL+ G R I+F + R T + +L +
Sbjct: 343 KLAADSHFENPNMAKLESVLLQQFGPSVKSRGILFSKTRQSTRCLFDWVLKSRALQTAGV 402
Query: 418 KTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
K + G +GI ++ +Q E + FR+G +N++++TS+ EEGLD+ CNLV+ +
Sbjct: 403 KAAILTGAGNGITYMTQNEQAETIRRFRQGDLNLLISTSVAEEGLDIPECNLVVRYGLLT 462
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKS-GDSTTQSRLENYL 515
+ Q+ GRAR +S Y ++ ++ G + R+ L
Sbjct: 463 NEIAQQQASGRARAVDSQYSVVARADGKEVRRERINEDL 501
>gi|380422390|ref|NP_001244086.1| probable ATP-dependent RNA helicase DHX58 [Danio rerio]
gi|344313235|gb|AEN04477.1| probable ATP-dependent helicase LGP2 [Danio rerio]
Length = 679
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 226/514 (43%), Gaps = 46/514 (8%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E ++ AL+ +N+I++L TG GKT A+ + + +L K + VAV LV KV LV
Sbjct: 6 RPYQEEVVQAALRGENSIIWLPTGGGKTRAAVYV--AEKHLETKANAKVAV-LVNKVHLV 62
Query: 82 PQQAEAIKMH---TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL---- 134
Q H ++ GD + G + ++++ T QIL + L
Sbjct: 63 DQHYMKEFGHYLRHKYRIKAISGDSSEKDFFGRL----VRVSDLVICTAQILENALNNMD 118
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ ++ +L++DECHH + Y IM + + + + LP+I G+TASP
Sbjct: 119 EDKHVEITDFTLLVIDECHHTNKESVYNKIMWRYVEKKVRK-EGRLPQILGLTASPGTGG 177
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFY-KYDEIPHALYTHL 253
S ++ + L + V T +L NF+P ++ + D+ P HL
Sbjct: 178 NKSLDKAVEHVLQICANLDSKIVSTKNYTPMLQNFVPKPKKEYDIVERRDKDPFG--DHL 235
Query: 254 ADELAMIEL----KHTRSLENLDLNEAQAELI--RKKVSKINSTLL-YCLSELGVW-LAL 305
+ MI +R L L E +A+++ K K+N+ L+ C L + AL
Sbjct: 236 KSMMLMIHEFMPPTVSRGLRELGTQEYEADVVELEKAGVKVNNRLIAQCALHLRKYNDAL 295
Query: 306 KAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL-- 363
+TI +D F ++++F + S L+ + + D++ L
Sbjct: 296 LINDTI----------RMVDAF--RVLEEFYNSRSSKLLDGTDIFLQ-GLFDENSLELKH 342
Query: 364 ---DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKT 419
D+ K+ L LLE + R IIF + R T + + + +
Sbjct: 343 LASDARYENPKLAQLQSRLLEEFQDTNSRGIIFSKTRRGTHCLNDWVKTNRELQRVNITA 402
Query: 420 KYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTV 479
+ G +G ++ +Q ++ FR+G +N++++TS+ EEGLD+ CNLV+ +
Sbjct: 403 GILTGAGNGANNMTQTEQKSVISHFRQGYLNLLISTSVAEEGLDIPECNLVVRYGLLTNE 462
Query: 480 CSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+ Q+ GRAR NS Y ++ G + L N
Sbjct: 463 IAQQQASGRARASNSVYSVVADVGGREVRKELVN 496
>gi|260817577|ref|XP_002603662.1| hypothetical protein BRAFLDRAFT_235564 [Branchiostoma floridae]
gi|229288984|gb|EEN59673.1| hypothetical protein BRAFLDRAFT_235564 [Branchiostoma floridae]
Length = 701
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 141/579 (24%), Positives = 240/579 (41%), Gaps = 94/579 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R+YQLE E+ LK N ++ T SGKT +A+ + + + L + P+ V V +V KV LV
Sbjct: 2 RDYQLELAEDVLKGANNVICSPTNSGKTRVAVYICKDH--LEKNPNGKVLV-MVNKVHLV 58
Query: 82 PQQAEAI-------KMHTDLKVGKYWGDMGVDFWDGA-----TWKEEMSKHEVLVMTPQI 129
Q + +H+ L G + + + A ++K+ + + +++++T QI
Sbjct: 59 EQHYQKQFKPLLPESLHSQL------GTISGENYSSAEEEHISFKQLVEQKKIIILTAQI 112
Query: 130 LLDGLRLS---YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
L + L + +L+ ++I DECHH + ++ Y IM + D P+I G
Sbjct: 113 LENHLARTDEEKVELSDFSLMIFDECHHTKKENVYNKIMGRVILQKFFQPDRLRPQIVGF 172
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFI--------------- 230
TASP + + + L L SK+ T E L +
Sbjct: 173 TASPGVGGARTHAKAVSHILQILANLDASKIKTAEKHEDELQKVVGQPKRECHITNERHA 232
Query: 231 -PFSTAKFKFYKY-----------DEIPHALYTHLADELAMIEL-KHTRSLENLDLNEAQ 277
PF K + + P A + E ++E+ K + +++ +
Sbjct: 233 DPFGDELKKMMQKIHRMIDMEGPGERGPPADFGTQMYEQWVVEMEKQGQCMKSNRCVQTC 292
Query: 278 AELIRKKVSK--INSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKF 335
AE +RK IN TL +S+ A + + ESD + DGF ET K
Sbjct: 293 AEHLRKYNDALVINDTLR--MSD-----AFQYLKEFYTKESD-----RQDGFDETDRK-- 338
Query: 336 GSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESL-LEYRGVEDIRCIIFV 394
+ + SG ++S K S + L E L E E R I++
Sbjct: 339 --------LASIFSGRQYSFFHLEKLTKKSQYENPNLEALKEKLKQECEAKEGARGILYT 390
Query: 395 ERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRK----KQNEIVEEFRRGLVN 450
+ + L S + + + + G +G ++ KQ E++ +FR G +N
Sbjct: 391 KTRQSTAFLLSWIRNTPELNNLLRADQLTGTGTGSISKNNHMTPIKQREVIRQFREGELN 450
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
+++AT++ EEGLD++ CN VI + + +Q+ GRAR ++S Y L V G + R
Sbjct: 451 LLIATTVAEEGLDIKECNFVIRYGLVTNEIAMMQASGRARAEDSTYTL-VAGGKTGAGQR 509
Query: 511 LENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVE 549
EN L M + + ++P D YH E
Sbjct: 510 EENNLYKVEMMHRAIRYIQNMPA----------DQYHQE 538
>gi|66813222|ref|XP_640790.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60468778|gb|EAL66778.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2285
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 14/198 (7%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIM-LLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ +A + +NTI+ L TG+GKTL++I+ L+ + +K + VA+FLV ++L
Sbjct: 21 RQYQEDAFNQCISRNTILVLPTGTGKTLVSILTFLKMFEINEKKNNDKVALFLVNNILLG 80
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ E IK TD +V GD +++ + ++++V TPQIL++ + + ++
Sbjct: 81 KQQTETIKNLTDKRVMVLSGD-------DLSFQTKKKNYDIVVATPQILMNLINKNKIRI 133
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKVSSSEQ 200
+ +I DE H+A G Y IM+ L++ D PRI G+TAS +K+ + + +
Sbjct: 134 DNFHFIIFDEVHNATGLDNYCKIMS-----LVKNLDPPFRPRILGLTASVLKNASNYTTE 188
Query: 201 DYWQKIHDLETLMNSKVY 218
+I LE +M SK+Y
Sbjct: 189 RATNEIKKLEDIMLSKIY 206
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 386 EDIRCIIFVE------RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNE 439
+ I CI+FVE +++ ++ + +S+L P K I G+N G +Q +
Sbjct: 393 DKINCIVFVETRDTGKKLLNLLISEKEISKLNP-------KLIYGHN-GRNGMKHSEQQQ 444
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLM 499
I+++F+ G+ V+V+T++LEEG+D++ CN VI FD ++ S IQ RGR R +S L++
Sbjct: 445 IIQQFKEGVCQVLVSTNVLEEGIDIKECNSVICFDNLYSLKSLIQRRGRDRTCSSFTLIL 504
Query: 500 VKSGDSTTQSRLENYLAS 517
+ + RLE+ + S
Sbjct: 505 ----EQDQRLRLEDLIKS 518
>gi|282162816|ref|YP_003355201.1| putative ATP-dependent helicase [Methanocella paludicola SANAE]
gi|282155130|dbj|BAI60218.1| putative ATP-dependent helicase [Methanocella paludicola SANAE]
Length = 765
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 223/496 (44%), Gaps = 63/496 (12%)
Query: 14 VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIA--IMLLR----SYAYLLRKPS 67
+ DT+ +R YQL AL++++++ L TG GKT+IA +M+ R +L
Sbjct: 10 IKPDTVS-SREYQLTLARTALERSSLIVLPTGLGKTIIALFVMIERLGDGKKVLMLSPTK 68
Query: 68 PFV---AVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLV 124
P V A FL + + P+Q V + G + + + WK + V+V
Sbjct: 69 PLVEQHAAFLRRVLTIDPEQ-----------VAVFTGSVAPEQRE-EVWK----RSRVVV 112
Query: 125 MTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIF 184
TPQ++ + + + F L + ++I DE H A G + Y I ++ + S+ P +
Sbjct: 113 STPQVIENDVLMKRFDLRDVSLIIFDEAHRATGDYAYVYIAKKYKEQ------SSDPLVL 166
Query: 185 GMTASP--IKSKVSSSEQDYWQKIHDLETLMNSKV----YTCASESVLSNFIPFSTAKFK 238
G+TASP K++ +Q+ + +L+T + V Y E V + +P A+ K
Sbjct: 167 GITASPGSTPEKINEVKQNLSIEHVELKTENDPDVSPYIYEKDVEWVKVD-VPDKAAEIK 225
Query: 239 FYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLY-CLS 297
+ +L D L + + + L +L QA+L + +S+ S Y +S
Sbjct: 226 I-----LLDSLMDDRLDRLRAMGVLYNTHLNKKELLMLQAKL-QASISRGGSPESYKAVS 279
Query: 298 ELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVP-SGAEWSIG 356
L + ++ A + + + D E K GS A++ L+ +GA G
Sbjct: 280 ILAEIMKIEHAVDLIQTQGVVPLKKYFDRLKEEAGSKGGSKATKRLMQDARLAGAIRVAG 339
Query: 357 DDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCT 416
+ N TEK+ ++ L+ + R I+F TA + + EL
Sbjct: 340 TADEVNPK----TEKVKEIVVEQLKEKPSS--RIIVFTNFRDTA---EFVSRELAAVEGV 390
Query: 417 WKTKYIAG----NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
+++ N+ G+ S+KKQ EI++ FR G N ++ATS+ EEGLD+ S +LVI
Sbjct: 391 KPVRFVGQASKLNDKGL---SQKKQVEILDAFRAGEFNTLIATSVAEEGLDIPSTDLVIF 447
Query: 473 FDPSRTVCSFIQSRGR 488
++P + IQ RGR
Sbjct: 448 YEPVPSEIRSIQRRGR 463
>gi|289192001|ref|YP_003457942.1| helicase domain protein [Methanocaldococcus sp. FS406-22]
gi|288938451|gb|ADC69206.1| helicase domain protein [Methanocaldococcus sp. FS406-22]
Length = 783
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 218/501 (43%), Gaps = 70/501 (13%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ NALK+ T+ L TG GKT IAI+++ A +L K + + L P LV
Sbjct: 15 ARLYQQIIAANALKKKTLCVLSTGLGKTAIAILVI---AGILTKKDGKILI-LAPSRPLV 70
Query: 82 PQQ----AEAIKMHTDLKV---GKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q E + + D + GK V+ + K ++ + TPQ++ + +
Sbjct: 71 EQHYNRLKEVLNIDEDKIIALTGKIQPKKRVELY---------KKGKIFIATPQVIENDI 121
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
++ +LI DE HH G H YA + +F + + G+TASP
Sbjct: 122 IAGRINIDEFVLLIADEAHHTTGDHAYAFVAKKFKDKC---------HVLGLTASP---- 168
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
S+ D +I + + + +V T E V + DE AL L
Sbjct: 169 --GSDIDRVMEICENLGIEHVEVRTEDDEDVKPYIAKVKLTPIRIDLPDEFKRAL--KLI 224
Query: 255 DELAMIELKHTRSLENLDL--NEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETIS 312
+E LK + +D N + ELI ++N+ L E+ L +E +
Sbjct: 225 NEALKERLKILKDAGVIDSISNTTKTELI-----ELNNKLFSYDEEVKYELIRVCSEALK 279
Query: 313 CYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT--- 369
A E L+ G+++ + + S + + SI +D K LL
Sbjct: 280 L----MHAKELLESQGKSVFLNYINKLSMQ-----RTKSAKSIVNDEKVREAVNLLMKSN 330
Query: 370 ------EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
+K+V +++ +L+ ED R IIF + T + +LL++ + ++I
Sbjct: 331 VEHPKLDKVVDIVKGILQKN--EDERIIIFAQYRDTVEKIVNLLTQ----NGIKAIRFIG 384
Query: 424 GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
N + S+K+Q E +E+F++ +V+V+TS+ EEG+D+ + N +I ++P + FI
Sbjct: 385 QANKEGKGMSQKEQIEAIEKFKKE-GSVLVSTSVSEEGIDIPTVNYIIFYEPVPSEIRFI 443
Query: 484 QSRGRA-RMQNSDYLLMVKSG 503
Q RGRA R + +++ G
Sbjct: 444 QRRGRAMRGEGGKVYVLIAKG 464
>gi|444714076|gb|ELW54964.1| putative ATP-dependent RNA helicase DHX58 [Tupaia chinensis]
Length = 680
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 225/523 (43%), Gaps = 60/523 (11%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TG+GKT R+ AY+ ++ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKT-------RAAAYVAKRHLETVDRAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q AE D + + GDMG G ++ +++L+ T ++L L
Sbjct: 57 VHLVTQHAEEFGRMLDGRWTMATLSGDMGPRAGFGYLARQ----NDLLICTAKLLQMALT 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-HRLLETGDSNLPRIFGMTASP 190
+ +L ++++DECHH Y I++++ H+L T LP++ G+TASP
Sbjct: 113 SPEEDEHVELTAFSLIVVDECHHTHKDTTYNIILSQYLEHKLRRT--RPLPQVLGLTASP 170
Query: 191 ---IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YD 243
+K+ + Q +L+T C + N P + +
Sbjct: 171 GTGRATKLDGAVDHILQLCANLDTWRIMSPQNCQPQLWEHNQQPCKQYDLCHRRSQDPFG 230
Query: 244 EIPHALYTHLADELAMIELKH---TRSLEN--LDLNEAQAE--LIRKKVSKINSTLLYCL 296
++ L + D + M EL T+ E ++L++A AE L ++V I+ L
Sbjct: 231 DLLKELMDQIHDHMEMPELSRDFGTQVYEQRVVELSQAAAEAGLQERRVYAIH--LRRYN 288
Query: 297 SELGVWLALKAAETISCYESDFFAWEQLDGF----GETIIKKFGSDASQALVTYVPSGAE 352
L + ++A + ++ + DF+ E+ E + + AL +G E
Sbjct: 289 DALLIHDTVRAVDALTMLQ-DFYDKERATKVQILRAERWLLELFEGHRNALTRLAITGPE 347
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+ K + +L + S RG IIF ++ L L E
Sbjct: 348 -----NPKLEMLEQILRNQFGS-PNSPSSPRG------IIFTRTRLSTHSLLLWLQEQPS 395
Query: 413 RHCTWKTKYIAGNNSGIQC--QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+ + + G S Q +++ Q E++ +FR G +N++VATS+ EEGLD+ CN+V
Sbjct: 396 LQAAVRAQVLTGAGSSSQNTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVV 455
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+ + S +Q+RGRAR S Y + G + L N
Sbjct: 456 VRYGLLTNEISMVQARGRARASQSVYSFVATEGSRELRRELTN 498
>gi|255589974|ref|XP_002535144.1| dicer-1, putative [Ricinus communis]
gi|223523936|gb|EEF27239.1| dicer-1, putative [Ricinus communis]
Length = 259
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E +L Y F++ SLL EA T S+ P Y+RLE +GD+VL+ L T Y KYP L
Sbjct: 35 VEEILKYKFKNRSLLEEAFTDSSF--PGKCFSYERLEHVGDSVLNLLFTKEHYFKYPNLP 92
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG LT +R+A+V+ + A +VKHG H+ + H L ++I F + L
Sbjct: 93 PGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIR----EFSQAILEYPLHSN 148
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQ 1306
+ PK L DI+ES GA+F+DS + + V++
Sbjct: 149 GLVDVPKVLADIVESAIGAVFIDSNSSVDTVWK 181
>gi|255970532|gb|ACU45742.1| dicer-like protein 1, partial [Sporothrix schenckii]
Length = 1021
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 134/291 (46%), Gaps = 40/291 (13%)
Query: 374 CLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS-GIQCQ 432
L + + G + RCI+FVE+ TA +L L + + +T + G S +
Sbjct: 147 ALFDVFTRFSG-QKTRCIVFVEQRYTATLLADLFQQEQMKIPNLRTGVLVGGGSKDMGKN 205
Query: 433 SRKKQNEIVEEFRRGLVNVIVATSILEEGLDV---QSCNLVIMFDPSRTVCSFIQSRGRA 489
+ + Q + +F+RG VN + ATSI EEGLD+ Q C+ + ++ T+ +IQSRGRA
Sbjct: 206 TFRTQLLTISKFKRGQVNCLFATSIAEEGLDIPGLQPCHPLRLYG---TMIQYIQSRGRA 262
Query: 490 RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCS--PLNNHMYGED--- 544
R Q S Y+ M + G+ + L AS NKMR C+ P N + G D
Sbjct: 263 RHQESTYIHMAELGNVDHRRLLAENKASENKMRDF--------CNALPENRKLEGNDNDM 314
Query: 545 -----------FYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHI--NKEMGI 591
Y V ST T SS+ ++ Y S LP P P++ + + +
Sbjct: 315 DYFLRDETDQQVYVVPSTQAKLTYRSSLVILAQYVSTLPEPSEGVPKPEYSVFCTADGFV 374
Query: 592 CTLYLPNNCPIQTVIAQGNIKTLKQ----AACLEACKKLHQIGALTDNLLP 638
C + LP++ PI+ A G + KQ AA C KL++ + +L P
Sbjct: 375 CEVVLPSSSPIRQ--ATGRPHSRKQVAKCAAAFAMCLKLYEKKYIDKHLHP 423
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 57/316 (18%)
Query: 925 PELCRIIM-----APISLSTFYSFTFVPSIMHRLQSLLLAVNLKNML----------LDH 969
P C I++ +PI + + +P I+HR++S L+A+ ++ L+
Sbjct: 706 PSRCFIVLDTLRISPIPVDSIAMIFNLPPIIHRIESTLIALEAAAVIGLPSIYPGLALEA 765
Query: 970 CMQNVTIPT-IKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLS 1028
C ++ + E + + E LE LGDSFLK A++ L+ + +E
Sbjct: 766 CTKDCDVSDDAGATETAINFQAGMGRNYERLELLGDSFLKMASTIALYTLAPDKNEFEYH 825
Query: 1029 VKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIP------------GDNSGSYELN 1076
V++ +I N L E L +IR++ FD + W P +G+ + N
Sbjct: 826 VERMCMICNKNLFNNALEIGLEEYIRSKEFD-RAWYPPVVDETVKLAAEAAAKTGTPDEN 884
Query: 1077 DDS--------LFNGRKIYVTGRKKVKSKTVADVVEALIG-AFLSTGGENVGLIFLDRIG 1127
+ L GRK + K++ADV EA+IG A+L+T E + + +
Sbjct: 885 GKTPTALHGLILKKGRKQQEGSYHALSDKSIADVCEAMIGAAYLTTYEERDFDLAVQAVS 944
Query: 1128 IKVDFVNVP---YQRQFQVH-----------AERLVNVRHLESLLNYSFRDPSLLVEALT 1173
+ P Y+ F + A ++ + + + Y+F P LL A+
Sbjct: 945 VVAKSKFHPMRTYKEYFAAYVLPEWQIAPATAAQVHMAKAVARDVGYTFTYPRLLRCAVM 1004
Query: 1174 HGSYMLPEIPRCYQRL 1189
H SY PR Y++L
Sbjct: 1005 HPSY-----PRVYEQL 1015
>gi|13542321|ref|NP_112009.1| RNA helicase (ERCC4-like) [Thermoplasma volcanium GSS1]
gi|14325756|dbj|BAB60659.1| translation initiation factor eIF4A [Thermoplasma volcanium GSS1]
Length = 513
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 225/505 (44%), Gaps = 78/505 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+ +N++ +NT++ + TG GKTLIA ML+ + +K ++FL P LV
Sbjct: 8 REYQINVYKNSIDKNTLIVMPTGLGKTLIAAMLIEKFFKENKK-----SIFLAPTKPLVL 62
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE---------VLVMTPQILLDG 133
Q M T +KV +G++ + + E+ E + V TPQ++L+
Sbjct: 63 QH-----MATLVKV------LGLNNNEICAFTGEVDSQERELRWVTGKIFVSTPQVVLND 111
Query: 134 LRLSYFKLNMIKVLILDECHHARGKHQYACIMTEF--YHRLLETGDSNLPRIFGMTASPI 191
++ + +++ DE H A G + Y I +EF Y + L I G+TASP
Sbjct: 112 MKSGIIDITRFDLIVFDEAHRAVGNYAYVDIASEFLEYKKKL---------IIGLTASP- 161
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDE---IPHA 248
E+ +Q+I + N V T E V K + D+ I
Sbjct: 162 -----GGEKGRFQEIVKNLGIENVVVKTEKDEDVRKYIKSIEMHLIKLKEPDQCGAIKDL 216
Query: 249 LYTHLADELA-----MIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL 303
L + L L I++ TR D+ E+ LI + +K + +L + L +
Sbjct: 217 LKSALDSVLKPLKDQGIKVGRTRK----DMAESIQNLINR--AKEDRSLFPLVRHLTAAI 270
Query: 304 ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQAL---VTYVPSGAEWSIGDDSK 360
+ Y ++ + LD +K Q++ + + S ++ ++
Sbjct: 271 RID-------YIIEYIETQGLD-VAYQYVKDMEESQDQSIKRAYSMMKSLDDFRKAIENM 322
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
N+ G K++ ++E + + + + R I+F T+ +L + L ++ + K K
Sbjct: 323 KNVLPGYRNPKMMKVLE-ICQEKVIAGERAIVFTHFRATSDMLLAYL-----KNSSDKIK 376
Query: 421 ---YIAGNNSGIQCQ-SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+I + G S+++Q +I+E+FR G NV++ATSI EEGLD+ ++V+ ++
Sbjct: 377 PVRFIGQADRGTDVGLSQEEQRQIIEQFRNGTYNVLIATSIAEEGLDIPDTDVVVFYEAV 436
Query: 477 RTVCSFIQSRGR-ARMQNSDYLLMV 500
+ FIQ +GR R ++ + ++V
Sbjct: 437 PSEIRFIQRKGRTGRSRSGEVYILV 461
>gi|330508988|ref|YP_004385416.1| DEAD/DEAH box helicase domain-containing protein [Methanosaeta
concilii GP6]
gi|328929796|gb|AEB69598.1| DEAD/DEAH box helicase domain protein [Methanosaeta concilii GP6]
Length = 762
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 214/515 (41%), Gaps = 86/515 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R +Q++ +ALK ++++ + TG GKT+IA+M+L L + +FL P LV
Sbjct: 18 RLFQMDLAASALKSSSLIVVPTGLGKTVIALMVL------LARLDKGRVLFLAPTKPLVE 71
Query: 83 QQAEAIK--MHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
Q A ++ + + +V G+M + A W+ + V TPQ++ + L
Sbjct: 72 QHAAFLRRVLKDEGEVTMMTGEMMPEKRKAA-WE----AARITVSTPQVIENDLLSRRID 126
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE- 199
L I ++I DE H A G + Y I E Y R + P + G+TASP K +E
Sbjct: 127 LEDISLIIFDEAHRAVGNYAYVYI-AERYAR-----EGTNPLVLGITASPGSEKEKIAEI 180
Query: 200 ---------QDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALY 250
Q +K D+ ++SK +V + TA I L
Sbjct: 181 CTNLSIENIQTRSEKDSDVAPFVHSKQIEWVKLTVPKELLDIRTA---------IEEVLR 231
Query: 251 THLAD--ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAA 308
+ D L + +K +L QA L+ + N +S L A
Sbjct: 232 DRIDDLNRLGISPVKIDPRATKKELLGLQAMLMSSAKRQANQATFKGISIL--------A 283
Query: 309 ETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN------ 362
E + Y + A Q E ++K F +A ++ S A I +DSKF
Sbjct: 284 EVLKLYHAIELAETQ---GTEALLKYFQRLQGEA-ISRSGSKASRRIMEDSKFRQAMQAL 339
Query: 363 -----------LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELL 411
+ +LTE+I ES R ++F TA L L E
Sbjct: 340 EDLQVEHPKPAMVRKILTEQIEAKPES----------RIMVFTNYRDTASALIRFLKE-- 387
Query: 412 PRHCTWKTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNL 469
K G +S + S+KKQ EI++ FR G NV++ATS+ EEG+D+ + ++
Sbjct: 388 --DPKIKAVRFVGQSSRADDEGLSQKKQAEILQRFRAGEYNVLIATSVGEEGIDIPATDM 445
Query: 470 VIMFDPSRTVCSFIQSRGR-ARMQNSDYLLMVKSG 503
V+ ++P + IQ +GR R ++ ++++ G
Sbjct: 446 VLFYEPVPSEIRSIQRKGRTGRARSGRVVVLMARG 480
>gi|340522441|gb|EGR52674.1| predicted protein [Trichoderma reesei QM6a]
Length = 1096
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 221/527 (41%), Gaps = 72/527 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ ++N+L NT+V L TG GKT IA ++ ++ R VF+ P LV
Sbjct: 156 RDYQFSIVKNSLFNNTLVALPTGLGKTFIAATVMLNFYRWTRSAK---IVFVAPTKPLVT 212
Query: 83 QQAEAI-------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
QQ +A + T L G + D W+ K V MTPQ LL+ L
Sbjct: 213 QQIDACYHIAGIPRSETTLLTGDIPPALRSDEWE---------KRRVFFMTPQTLLNDLS 263
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
Y I ++++DE H A G++ YA T+ R SN R+ +TA+P SKV
Sbjct: 264 HGYADPKSICLMVIDEAHRAVGEYAYAK-ATKLIRRF-----SNSFRVLALTATP-GSKV 316
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP--HALYTH- 252
+ Q++ D + + ++ T S + + + DE+ L+T
Sbjct: 317 ETV-----QEVIDNLGISHCEIRTEESLDIRQYVHQRNIDQIILEPSDEMNLISELFTEA 371
Query: 253 ---LADELAMIELKHTR---SLENLDLNEAQAELIRKKVSKINSTLLY-------CLSEL 299
L ++L+ + + R +L L +AQ E + ++ N + + L+ L
Sbjct: 372 LKPLTEKLSSQNIWYGRNPMALTTYGLIQAQKEWFATRGNRANQGVQFMMRAIFSVLTSL 431
Query: 300 GVWLALKAAETISCYES---DFFAWEQLDGFGETIIKK--FGSDASQALVTYVPSGAEWS 354
+ L I + DF + ++ G + K+ S + Q ++ + A W
Sbjct: 432 AHSIKLLQFHGIKPFYDNMLDFRSEQEDKGEKGSKYKRQILDSPSFQEMMDKI---AGW- 487
Query: 355 IGDDSKFNLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+D + K+ L + +L + E R I+F E +A + + + P
Sbjct: 488 ------LKMDGFVGHPKLTALADCVLNHFMDNGESTRVIVFSEYRDSAEEIVRMFNAHRP 541
Query: 413 RHCTWKTKYIAGNNSGIQCQS--RKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
K G G + + +K+Q E +E F+ G NV+VATSI EEGLD+ +L+
Sbjct: 542 ---LIKATVFVGQADGKRGEGMKQKQQIETIERFKTGAYNVLVATSIGEEGLDIGQVDLI 598
Query: 471 IMFDPSRTVCSFIQSRGRA---RMQNSDYLLMVKSGDSTTQSRLENY 514
+ +D S + +Q GR R N LLM + +NY
Sbjct: 599 VCYDSSASPIRMLQRMGRTGRKRAGNIALLLMRGKEEEQFAKSKDNY 645
>gi|330794390|ref|XP_003285262.1| hypothetical protein DICPUDRAFT_149105 [Dictyostelium purpureum]
gi|325084804|gb|EGC38224.1| hypothetical protein DICPUDRAFT_149105 [Dictyostelium purpureum]
Length = 2292
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 10/202 (4%)
Query: 24 NYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
NYQ+EA +K+N+I+ L TG+GKTLI+I+ L L + VA+FLV V LV Q
Sbjct: 33 NYQIEAFYECIKRNSIIVLPTGTGKTLISILALLEMHRLNYPINNKVALFLVSSVHLVKQ 92
Query: 84 QAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE---VLVMTPQILLDGLRLSYFK 140
QAE+I+ +T L+V M + + ++ + K E VLV TPQ +++ ++ +
Sbjct: 93 QAESIEQYTKLRVIT----MSSNTSNKIERRQFLGKKESYDVLVATPQTVINSIKNGFIF 148
Query: 141 LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ ++I DE HHA G+ Y+ +M + Y + + PRI G+TAS S V +
Sbjct: 149 IEDFHIIIFDEVHHAVGESSYSMLM-DIYTSVSDGAAK--PRIIGLTASISHSSVIFDVE 205
Query: 201 DYWQKIHDLETLMNSKVYTCAS 222
+ +I LE M S V+ S
Sbjct: 206 NAITEIGQLEKRMCSSVFRPTS 227
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 390 CIIFVERVITAIVLQSLL--SELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRG 447
CIIFVE L +LL E++ T+K K I G +G + +KQ + V++F+ G
Sbjct: 416 CIIFVETRTIGKRLINLLRKDEIIN---TYKPKMIFGT-AGEDGMTIRKQIKRVDDFKNG 471
Query: 448 LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTT 507
+++AT++LEEG+D+ C LVI FD +V S IQ RGR R Q ++++ M+ S D
Sbjct: 472 SCEILIATNVLEEGIDIPECKLVICFDSIYSVRSLIQRRGRERTQ-TNFIAMINSKD--- 527
Query: 508 QSRLENYLASGNKMRKEVL 526
+SR+E + S M + ++
Sbjct: 528 KSRIERVMNSELLMTRAII 546
>gi|294463153|gb|ADE77113.1| unknown [Picea sitchensis]
Length = 173
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
++ LE +L Y F+ SLL EA+TH S E Y++LEF+GD+VL YL+T +LY Y
Sbjct: 18 SLSELEDILKYKFKSKSLLKEAITHSSNNNTE---SYEKLEFVGDSVLGYLVTKHLYCAY 74
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P L G LT +RS +V+ + +A VKH H+++L + L + I V E S
Sbjct: 75 PKLYQGTLTLLRSRNVDTEKFARVCVKHKFHQYLLLNAPALQQIIEDFVKDIEDESKSFR 134
Query: 1270 FGWESVTSF--PKALGDIIESLAGAIFVD 1296
G F PK L DI+ES+AGA+FVD
Sbjct: 135 CG-----DFKPPKVLADIVESIAGAVFVD 158
>gi|15669699|ref|NP_248512.1| Hef nuclease [Methanocaldococcus jannaschii DSM 2661]
gi|3915469|sp|Q58900.2|Y1505_METJA RecName: Full=Putative ATP-dependent RNA helicase MJ1505
gi|2826423|gb|AAB99518.1| ATP dependent RNA helicase, putative [Methanocaldococcus jannaschii
DSM 2661]
Length = 778
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 219/500 (43%), Gaps = 64/500 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ NALK+ T+ L TG GKT IAI+++ A +L K V + L P LV
Sbjct: 15 ARLYQQIIAANALKKKTLCVLSTGLGKTAIAILVI---AGILTKKDGKV-LILAPSRPLV 70
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
Q +K ++ K G E K ++ + TPQ++ + + +
Sbjct: 71 EQHYNRLKQVLNIDEDKIIALTGK--IQPKKRAELYKKGKIFIATPQVIENDIIAGRINV 128
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+ +LI DE HH G H YA + +F + I G+TASP S+ D
Sbjct: 129 DEFILLIADEAHHTTGDHAYAFVAKKFKDKC---------HILGLTASP------GSDID 173
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
+I + + + +V T E V + +E AL L +E
Sbjct: 174 KVMEICENLGIEHVEVRTEDDEDVKPYIAKVKLIPIRIDLPNEFKRAL--KLINEALKER 231
Query: 262 LKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAW 321
LK L++ + + A++ + ++ ++N+ L E+ L +E + A
Sbjct: 232 LK---ILKDAGVINSIADVTKTELIELNNKLFSYDEEVKYELIKVCSEALKL----MHAK 284
Query: 322 EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE---------KI 372
E L+ G+++ + + S + + SI +D K LL + K+
Sbjct: 285 ELLESQGKSVFLNYINKLSMQ-----RTKSAKSIVNDEKVREAVNLLMKSDVEHPKLGKV 339
Query: 373 VCLIESLLEYRGVEDIRCIIF------VERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
V +++++LE +D R IIF VE+++ LL ++ ++I N
Sbjct: 340 VDMVKNILEKN--KDERIIIFAQYRDTVEKIVN----------LLTQNGIKAIRFIGQAN 387
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
+ S+K+Q E +E F++ +V+V+TS+ EEG+D+ S N +I ++P + FIQ R
Sbjct: 388 KEGKGMSQKEQIEAIERFKKE-GSVLVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRR 446
Query: 487 GRA-RMQNSDYLLMVKSGDS 505
GRA R + +++ G +
Sbjct: 447 GRAMRGEGGKVYVLIAKGTA 466
>gi|358387248|gb|EHK24843.1| hypothetical protein TRIVIDRAFT_30360 [Trichoderma virens Gv29-8]
Length = 1094
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 218/513 (42%), Gaps = 74/513 (14%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ + N+L NT+V L TG GKT IA ++ ++ Y K + V F+ P LV
Sbjct: 155 RDYQYSIVRNSLFNNTLVALPTGLGKTFIAATVMLNF-YRWTKTAKIV--FVAPTKPLVT 211
Query: 83 QQAEAI-------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
QQ +A + T L G + D W+ K V MTPQ LL+ L
Sbjct: 212 QQIDACYNIAGIPRSETTLLTGDIAPALRSDEWE---------KRRVFFMTPQTLLNDLS 262
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
Y I ++++DE H A G++ YA T+ R SN R+ +TA+P SKV
Sbjct: 263 HGYADPKSIGLMVIDEAHRAVGEYAYAK-ATKLIRRF-----SNSFRVLALTATP-GSKV 315
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP--HALYTH- 252
+ Q++ D + + ++ T S + + + DE+ L+T
Sbjct: 316 ETV-----QEVIDNLGISHCEIRTEESLDIRQYVHQRNIDQIVLDPSDEMNLIGELFTEA 370
Query: 253 ---LADELAMIELKHTR---SLENLDLNEAQAELIRKKVSKINSTLLY-------CLSEL 299
L ++L+ + + R +L L +AQ E + ++ N + + L+ L
Sbjct: 371 LKPLTEKLSSQNIWYGRNPMALTTYGLIQAQKEWFATRGNRANQGVQFMMRAIFSVLTSL 430
Query: 300 GVWLALKAAETISCYESDF--FAWEQLDGFGETIIKK----FGSDASQALVTYVPSGAEW 353
+ L I + + F EQ +G GE K S + Q ++ + A W
Sbjct: 431 AHSIKLLQFHGIKPFYDNMVDFRSEQ-EGKGEKGSKYRRQIIDSTSFQEMMDKI---AGW 486
Query: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELL 411
LD + K+ L + +L + E R I+F E +A + + +
Sbjct: 487 -------LKLDGFVGHPKLTALADCVLNHFMDNGEGTRVIVFSEYRDSAEEIVRMFNTHR 539
Query: 412 PRHCTWKTKYIAGNNSGIQCQSRKKQNEI--VEEFRRGLVNVIVATSILEEGLDVQSCNL 469
P K G G + + K++ +I +E F+ G NV+VATSI EEGLD+ +L
Sbjct: 540 P---LIKATVFVGQADGKRGEGMKQKQQIDTIERFKTGAYNVLVATSIGEEGLDIGQVDL 596
Query: 470 VIMFDPSRTVCSFIQSRGRA---RMQNSDYLLM 499
++ +D S + +Q GR R N LLM
Sbjct: 597 IVCYDSSASPIRMLQRMGRTGRKRAGNIALLLM 629
>gi|50897083|dbj|BAD34722.1| Dicer-related RNase III protein Dcr1p [Tetrahymena thermophila]
Length = 1450
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 23/168 (13%)
Query: 44 TGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAI--------------- 88
TG+GKTL++ M+ + Y L K FL +V LV QQ
Sbjct: 1 TGTGKTLVSQMIAQ---YTLSKFKGSKVAFLANQVNLVEQQYNNFLTYQRSIEEYLVKQN 57
Query: 89 ---KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIK 145
+++ ++ + + G M +DFW+ + W++ + + +++ + QI L+GLR +F+L K
Sbjct: 58 LSEEINQNINISFFHGKMNLDFWNRSFWQKNVEQSQIIFFSSQIFLNGLRRGHFQLTQFK 117
Query: 146 VLILDECHHARGKHQYACIMTEFYHRLLETGD--SNLPRIFGMTASPI 191
++I DECH+ +H ++ IM EFY ++ + N P I G++A+PI
Sbjct: 118 LIIFDECHNTSKEHAFSQIMKEFYFQVKKNDIVLKNTPNIIGLSATPI 165
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 432 QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q +Q +IVE FR ++V+TS++EEG D+ SCN+VI F + +IQ +GRAR
Sbjct: 457 QKYSEQQKIVERFRNKQFKILVSTSVVEEGFDIPSCNIVIAFSKIISQRQYIQMKGRARA 516
Query: 492 QNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS 527
+NS + +V ++ + +L+N+ +++++E S
Sbjct: 517 ENSKFYALVAVYNN-NKIKLQNHQIVSDQIKQEYYS 551
>gi|2127880|pir||H64487 eIF-4A family probable ATP-dependent RNA helicase homolog -
Methanococcus jannaschii
Length = 784
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 219/500 (43%), Gaps = 64/500 (12%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ NALK+ T+ L TG GKT IAI+++ A +L K V + L P LV
Sbjct: 21 ARLYQQIIAANALKKKTLCVLSTGLGKTAIAILVI---AGILTKKDGKV-LILAPSRPLV 76
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
Q +K ++ K G E K ++ + TPQ++ + + +
Sbjct: 77 EQHYNRLKQVLNIDEDKIIALTGK--IQPKKRAELYKKGKIFIATPQVIENDIIAGRINV 134
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+ +LI DE HH G H YA + +F + I G+TASP S+ D
Sbjct: 135 DEFILLIADEAHHTTGDHAYAFVAKKFKDKC---------HILGLTASP------GSDID 179
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
+I + + + +V T E V + +E AL L +E
Sbjct: 180 KVMEICENLGIEHVEVRTEDDEDVKPYIAKVKLIPIRIDLPNEFKRAL--KLINEALKER 237
Query: 262 LKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAW 321
LK L++ + + A++ + ++ ++N+ L E+ L +E + A
Sbjct: 238 LK---ILKDAGVINSIADVTKTELIELNNKLFSYDEEVKYELIKVCSEALKL----MHAK 290
Query: 322 EQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE---------KI 372
E L+ G+++ + + S + + SI +D K LL + K+
Sbjct: 291 ELLESQGKSVFLNYINKLSMQ-----RTKSAKSIVNDEKVREAVNLLMKSDVEHPKLGKV 345
Query: 373 VCLIESLLEYRGVEDIRCIIF------VERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
V +++++LE +D R IIF VE+++ LL ++ ++I N
Sbjct: 346 VDMVKNILEKN--KDERIIIFAQYRDTVEKIVN----------LLTQNGIKAIRFIGQAN 393
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
+ S+K+Q E +E F++ +V+V+TS+ EEG+D+ S N +I ++P + FIQ R
Sbjct: 394 KEGKGMSQKEQIEAIERFKKE-GSVLVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRR 452
Query: 487 GRA-RMQNSDYLLMVKSGDS 505
GRA R + +++ G +
Sbjct: 453 GRAMRGEGGKVYVLIAKGTA 472
>gi|167046028|gb|ABZ10545.1| dicer-like protein D [Trichoplax adhaerens]
Length = 351
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 35/352 (9%)
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFI 1053
F+ E LE LGDS+LK+ + F N EG +S+ + +SN+ L + + L +
Sbjct: 6 FNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQ 65
Query: 1054 RTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIG 1108
F K W+ PG N+ + N+ ++ K+V S K ++D VE L+G
Sbjct: 66 FNTPFKLKQWLPPGFTCIRNNANLVANNMLTDGSKQRDSESFKQVMSVKNISDTVEGLVG 125
Query: 1109 AFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVR--HLESLL----NYSF 1162
+ G L IG+ +D NV ++ V+ E L S + +Y F
Sbjct: 126 VYSLASGPVDAARLLPWIGLDID-PNVLIEKDKSVNFEIPTTDEDIQLSSCILRNTDYQF 184
Query: 1163 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRS 1222
+ L A TH S YQRLE+LGDA+L+YL+ ++Y + P PG ++ +S
Sbjct: 185 NNFYWLRIAFTHSSVA----SENYQRLEYLGDAILEYLLIEFVYCRKPYFGPGKISHFKS 240
Query: 1223 ASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG-------------ST 1269
N ++L ++ + HI +L I ++ +F+++ L +
Sbjct: 241 VMTRNQTFSLIAIAFQFYTHI-RCHSKLKLDIMDSIQNFKEILLDNHQDDHQPDIGHFAN 299
Query: 1270 FGWESVTS-----FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
++ TS PK D+ E+ AI++D G V++ + +++ ++
Sbjct: 300 LAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYKMVQRIL 351
>gi|115462923|ref|NP_001055061.1| Os05g0271300 [Oryza sativa Japonica Group]
gi|50878449|gb|AAT85223.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55908895|gb|AAV67838.1| unknown protein [Oryza sativa Japonica Group]
gi|113578612|dbj|BAF16975.1| Os05g0271300 [Oryza sativa Japonica Group]
Length = 344
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 51/256 (19%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 25 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 82
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF--- 1261
LY P L PG L+ +R+A+++ + A +V+H L+ + R+++ V F
Sbjct: 83 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNC----PRLDLLVGQFIET 138
Query: 1262 ------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI------- 1308
+ LS G SV PK L DI+E++A A++VD + E +++ +
Sbjct: 139 VKQEPEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHGLQ 196
Query: 1309 --------------------------RPLLEPMITPETMRFHPVRELTEYCQKNHFSMKK 1342
R L EP+IT ET+ PV L E CQK H M +
Sbjct: 197 EIRWTVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTMLHELCQK-HGKMAQ 255
Query: 1343 PVASRISGKAAVTVEV 1358
+ G V V V
Sbjct: 256 FKTWQKGGMTVVNVFV 271
>gi|219123462|ref|XP_002182043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406644|gb|EEC46583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1565
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 228/545 (41%), Gaps = 84/545 (15%)
Query: 3 PVSMESDTTEE---VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSY 59
PV ++ T E +A+T P R YQLE + AL NT+V L TG GKTLIA +L Y
Sbjct: 260 PVPIDESTAHEWVYPTAETFP-KRQYQLEITKTALFHNTLVSLPTGLGKTLIAAAVL--Y 316
Query: 60 AYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGA--TWKEEM 117
Y P+ V +FL P + LV QQ +A + MG+ D A T K
Sbjct: 317 NYYRWFPTGKV-IFLAPTLPLVNQQVKAC-----------YDIMGIPPSDTAVLTGKVHA 364
Query: 118 SKHE-------VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYH 170
++ E V TPQ + L + + + ++LDE H + G + Y ++
Sbjct: 365 ARREIVWRDRRVFFCTPQTVQKDLDANRCDSSKVVCVVLDEAHKSTGDYAYVKVV----E 420
Query: 171 RLLETGDSNLPRIFGMTASP------IKSKVSSSEQDYWQKIHDLETLMNSKVYTCASES 224
RL E G R+ G++A+P I+S V + + D + + ++ SE
Sbjct: 421 RLEEAGAHF--RVLGLSATPGTNIKAIQSVVDVLRINKIEARRDSDPSVARYIHEKQSEI 478
Query: 225 VLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKK 284
V+ S ++ +++ L L A+ L ++ +L A+ E +++
Sbjct: 479 VVVKQA--SASRTIERALNDVVGPLLERLRSAGALGRLTGNATITAYNLIRAREEFCKRR 536
Query: 285 VSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALV 344
N L +G +L AA+ SD + G + + + ++ + +V
Sbjct: 537 ----NDDGL-----IGFFL---AAQQFVQIRSDLH--KHGVGLVRSKLSRLRTERQRGMV 582
Query: 345 TYVPSGAE----W------SIGDDSKFN--LDSGLLTEKIVCLIESLLEYRGVEDIRCII 392
+ G E W + +S N D + K+ L E L+E+ E R
Sbjct: 583 ASIVKGKEFQALWEEVAKSTCDPNSNHNNVQDKLVNNPKLTQLREILVEH--FERARACS 640
Query: 393 FVERVITAIVLQSLLSELL-----------PRHCTWKTKYIAGNNSGIQCQSRKK--QNE 439
R I + +SE++ PRH + K G GIQ + ++ Q +
Sbjct: 641 TSSRAIVFSQFRDSVSEIVDILSASRPLIRPRHFVGQGKGTKGEG-GIQLKGMRQVEQQQ 699
Query: 440 IVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR-ARMQNSDYLL 498
+ EFR NV+V T I EEGLD+ +L++ FD R+ IQ GR R ++ +
Sbjct: 700 AIREFREDTFNVLVCTCIGEEGLDIGEVDLIVNFDTLRSPIRMIQRTGRTGRKRDGRVVC 759
Query: 499 MVKSG 503
+V G
Sbjct: 760 LVAEG 764
>gi|449668207|ref|XP_002154892.2| PREDICTED: uncharacterized protein LOC100214913 [Hydra
magnipapillata]
Length = 712
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 30/193 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ++A AL+ N IV L+TG GKTLIA ML+ + P + + +V ++ LV
Sbjct: 161 RQYQIQAFIEALQSNLIVVLKTGFGKTLIASMLIGRMCEI--NPQK-MGLMIVDRIPLVF 217
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH----------EVLVMTPQILLD 132
Q A +I T+L+V G E +KH +VL++T D
Sbjct: 218 QHAASISSDTNLRVVSLCG-------------ENKTKHTIKRINDGDFDVLIITAGAFYD 264
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
++ Y NM V+++DECHHA G H+Y ++ F L +N PRI G+TASPI
Sbjct: 265 MVKQKYIDANMFCVVVIDECHHATGGHKYLDVLQIFTSMPL----ANQPRILGLTASPIN 320
Query: 193 SKVSSSEQDYWQK 205
+K + D QK
Sbjct: 321 AKTITQATDRLQK 333
>gi|218196456|gb|EEC78883.1| hypothetical protein OsI_19246 [Oryza sativa Indica Group]
gi|222630918|gb|EEE63050.1| hypothetical protein OsJ_17858 [Oryza sativa Japonica Group]
Length = 350
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 51/256 (19%)
Query: 1145 AERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVY 1204
A+R +E LL Y FRD LL EALTH S+ + YQRLEF+GD+ L + +
Sbjct: 31 ADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNF 88
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF--- 1261
LY P L PG L+ +R+A+++ + A +V+H L+ + R+++ V F
Sbjct: 89 LYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNC----PRLDLLVGQFIET 144
Query: 1262 ------EKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI------- 1308
+ LS G SV PK L DI+E++A A++VD + E +++ +
Sbjct: 145 VKQEPEDDLSTVPYGG--SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHGLQ 202
Query: 1309 --------------------------RPLLEPMITPETMRFHPVRELTEYCQKNHFSMKK 1342
R L EP+IT ET+ PV L E CQK H M +
Sbjct: 203 EIRWTVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTMLHELCQK-HGKMAQ 261
Query: 1343 PVASRISGKAAVTVEV 1358
+ G V V V
Sbjct: 262 FKTWQKGGMTVVNVFV 277
>gi|405969612|gb|EKC34573.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 902
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 11/188 (5%)
Query: 7 ESDTTEEVSADTLPF--ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLL 63
E D E +T P RNYQLE E AL +NTI+ ETG+GKT +A+ L + + L
Sbjct: 203 EKDINEATEKETFPTLTMRNYQLELAEIALSGRNTIICAETGTGKTYVALYLTQQH---L 259
Query: 64 RKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSK--HE 121
+ VFL LV QQ E K L K + + D K M+K H+
Sbjct: 260 ASKNDACVVFLARTNALVEQQYE--KFSRFLYKYKVYH-LKTDKTAAMGRKLAMAKENHQ 316
Query: 122 VLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLP 181
VL MTPQILL+ + L + +LILDECHH R + Y +M ++ H ++ ++LP
Sbjct: 317 VLFMTPQILLNNINSKQISLQEVSLLILDECHHTRKREPYNNVMKQYLHLKRDSKKTSLP 376
Query: 182 RIFGMTAS 189
++ G+TA+
Sbjct: 377 QVLGLTAT 384
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFR 445
+D++ +IFVE TA L ++E L Y A +G + K + ++++R
Sbjct: 598 DDVKGMIFVETRATAFALAKYITEELKM-----MGYRAAPFTGSMLEEEK--TDTLKKYR 650
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
+G +N++VATS+ EG+DV N +I ++ + +Q GRAR Q S + D
Sbjct: 651 KGEINLLVATSVGSEGIDVPDSNFIITYNYTGNEADIMQMSGRARRQGS---TVTHISDQ 707
Query: 506 TTQSRLENYL 515
T Q R E L
Sbjct: 708 TIQRREETSL 717
>gi|337284763|ref|YP_004624237.1| Hef nuclease [Pyrococcus yayanosii CH1]
gi|334900697|gb|AEH24965.1| Hef nuclease [Pyrococcus yayanosii CH1]
Length = 751
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 235/552 (42%), Gaps = 80/552 (14%)
Query: 35 KQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDL 94
++N ++ L TG GKTLIA+M+ Y L K V + L P LV Q AE+ + +L
Sbjct: 23 ERNCLIVLPTGLGKTLIAMMI---ADYRLSKYGGKV-LMLAPTKPLVLQHAESFRRLFNL 78
Query: 95 ---KVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDE 151
KV G+MG + A W ++ +V+V TPQ + + L L + +L+ DE
Sbjct: 79 PPEKVVALTGEMGPEERARA-W----ARAKVIVATPQTVENDLLTGRINLEDVSLLVFDE 133
Query: 152 CHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLET 211
H A G + Y I E+ + + P + G+TASP SSE+ + I +L
Sbjct: 134 AHRAVGNYAYVFIAKEYRRQ------ARNPLVIGLTASP-----GSSEEKIMEVIRNL-G 181
Query: 212 LMNSKVYTCASESVLSNFIPFSTA-KFKFYK------YDEIPHALYTHLADELAMIELKH 264
+ + +V T S V P+ KF++ K Y E+ L L D L +
Sbjct: 182 IEHVEVRTEDSPDVR----PYVHGIKFEWVKVELPPLYKEVRKLLRDMLQDALRPLAEAG 237
Query: 265 TRSLENLDLNEAQ----AELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFA 320
+ DL + + ++I ++++K N L L L +ALK I E+ +
Sbjct: 238 LIDSPSPDLPKKEVLRAGQIIGEEIAKGNHDLGRLL--LYHAMALKLHHAIELLETQGLS 295
Query: 321 WEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTE---------K 371
++ +KK +A + A + D + LL + K
Sbjct: 296 ALRV------YLKKLYEEAKAGRIK-----ASRELFRDMRMKKAISLLVQARELGLDHPK 344
Query: 372 IVCLIESLLEYRGVEDI-RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS--G 428
I L E L E + + I+F TA L LS + K + G S G
Sbjct: 345 IDKLKELLREQLDKKRASKVIVFTNYRETAKKLVEELSRM-----GLKARRFVGQASREG 399
Query: 429 IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGR 488
+ S+++Q I++ F RG NV+VATS+ EEGLDV ++V+ ++P + +Q RGR
Sbjct: 400 DRGMSQREQKAILDAFARGDFNVLVATSVGEEGLDVPEVDMVVFYEPVPSAIRSVQRRGR 459
Query: 489 -ARMQNSDYLLMVKSG--------DSTTQSRL--ENYLASGNKMRKEVLSHASLPCSPLN 537
R + ++++ G S + RL E +R+E + + P
Sbjct: 460 TGRHKPGRVVILMARGTRDEAYYWSSRQKERLMVETIKRVNEMLRRERQTSLEVFVKPSE 519
Query: 538 NHMYGEDFYHVE 549
GE+ + VE
Sbjct: 520 KEERGEEAWKVE 531
>gi|167046030|gb|ABZ10546.1| dicer-like protein D [Placozoa sp. DMJ-2008]
Length = 351
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 35/352 (9%)
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFI 1053
F+ E LE LGDS+LK+ + F N EG +S+ + +SN+ L + + L +
Sbjct: 6 FNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQ 65
Query: 1054 RTESFDPKMWIIPG----DNSGSYELNDDSLFNGRKIYVTGRKKVKS-KTVADVVEALIG 1108
F K W+ PG N+ + N+ ++ K+V S K ++D VE L+G
Sbjct: 66 FNTPFKLKQWLPPGFTCIRNNANLVANNMLTDGSKQRDSESFKQVMSVKNISDTVEGLVG 125
Query: 1109 AFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVR--HLESLL----NYSF 1162
+ G L IG+ +D NV ++ V+ E L S + +Y F
Sbjct: 126 VYSLASGPVDAARLLPWIGLDID-PNVLIEKDKSVNFEIPTTDEDIQLSSCILRNTDYQF 184
Query: 1163 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRS 1222
+ L A TH S YQRLE+LGDA L+YL+ ++Y + P PG ++ +S
Sbjct: 185 NNFYWLRIAFTHSSVA----SENYQRLEYLGDATLEYLLIEFVYCRKPYFGPGKISHFKS 240
Query: 1223 ASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG-------------ST 1269
N ++L ++ + HI +L I ++ +F+++ L +
Sbjct: 241 VMTRNQTFSLIAIAFQFYTHI-RCHSKLKLDIMDSIQNFKEILLDNHQDDHQPDIGHFAN 299
Query: 1270 FGWESVTS-----FPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
++ TS PK D+ E+ AI++D G V++ + +++ ++
Sbjct: 300 LAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYKMVQRIL 351
>gi|327272183|ref|XP_003220865.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Anolis
carolinensis]
Length = 680
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 227/515 (44%), Gaps = 65/515 (12%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E +E AL+ +N I++L TG+GKT A + + + K V V +VP LV
Sbjct: 4 REYQWEVIEPALEGKNIIIWLPTGAGKTRAAAYVCKRHLESRAKSKVAVLVNMVP---LV 60
Query: 82 PQQAEAIKMHTDLKVGKYWGD-MGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS--- 137
Q IK ++ + + D + + + K+ +++ T +IL + L
Sbjct: 61 DQH---IKNEFSFLKNRFNIEAISGDSIQKMIFSDVVKKNNLIICTAKILQNALDSQDED 117
Query: 138 -YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
+ +L +L++DECHH + Y IM + L+ G NLP+I G+TAS S
Sbjct: 118 VHVELTDFSLLVIDECHHTHKETTYNKIMQHYLEHKLK-GQKNLPQILGLTASLGTGGAS 176
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHA-------- 248
S LE + + CA+ L S+ K+KFY IP
Sbjct: 177 S-----------LEGAQDHILQICAN---LDTEKIMSSEKYKFYLDTRIPQPKKQYDLSD 222
Query: 249 --LYTHLADELAMI--ELKHTRSLENLDLN------EAQ-AELIRKKVSKINSTLLYCLS 297
L +L MI E+ L +L + E Q +L+++ + + C
Sbjct: 223 PRLRDPFGQQLKMIMTEICTYLDLPSLSTDFGSQTFEQQVVDLLKEGAKEFCQKIRVCAL 282
Query: 298 ELGVW-LALKAAETISCYESDFFAWEQLDGFG--ETIIKKFGSDASQALV-TYVPSGAE- 352
L + AL +T+ + A+ LD F E +K A + LV + + AE
Sbjct: 283 HLRKYNDALLINDTVRMID----AFNALDEFYKLENAMKVLHHPAERHLVEIFGRNRAEL 338
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
++ +D + EK+ +++ +++ ++ R I+F +A L L +
Sbjct: 339 LALAEDKSY---ENPKLEKLQQVLQD--QFQELKSSRGIVFTRTRQSAHSLHQWLQDNRA 393
Query: 413 RHCTWKTKYIAGNNSG----IQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCN 468
C K +G I+ ++++Q +++ FR+G +N++ +TS+ EEGLDV CN
Sbjct: 394 L-CELGIKAAVLTGAGYSNQIKHMTQQEQQNVIQNFRKGALNLLFSTSVAEEGLDVPECN 452
Query: 469 LVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
+V+ + + +Q+RGRAR NS ++ K+
Sbjct: 453 IVVRYGLMTNEIAMMQARGRARAPNSICSVLAKTN 487
>gi|296109929|ref|YP_003616878.1| DEAD/DEAH box helicase domain protein [methanocaldococcus infernus
ME]
gi|295434743|gb|ADG13914.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus infernus
ME]
Length = 770
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 227/543 (41%), Gaps = 77/543 (14%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
AR YQ +ALK NT+V L TG GKT IA +++ A LL K V + + P LV
Sbjct: 15 ARIYQQLIAASALKDNTLVVLPTGLGKTAIAALVI---AGLLTKKDGKVLI-IAPTRPLV 70
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE-------VLVMTPQILLDGL 134
Q K D+ + +D T K +K E + + TPQ++ + +
Sbjct: 71 EQHYRTFK---DI--------LNIDGIVAITGKIPPAKREKIYREGKIFIATPQVIENDI 119
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
K++ +LI DE HH G H YA + F + I +TASP
Sbjct: 120 LSGRLKVDDFILLIADEAHHTVGNHAYAFVAKSFKDKC---------HILALTASP---- 166
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLA 254
+ D +I + + + + E V + +E AL L
Sbjct: 167 --GHDVDKVMEICENLGIKRIEFRDESDEDVKPYVAKVRMIPIRVELLEEFKKAL--KLL 222
Query: 255 DELAMIELKHTRSLENLD-LNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
D+ LK + +D +N + EL+ ++N+ L E+ L K +E +
Sbjct: 223 DDALKERLKFLKDHGVIDSINVTKTELL-----ELNNKLFSYDDEVKYELIKKCSEALKL 277
Query: 314 YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDD---SKFNLDSGLLTE 370
+A E L+ G+ + K+ + L A+ + D+ NL L E
Sbjct: 278 ----MYAKELLESQGKDVFLKY----IEKLSLQRSKSAKNVVCDERVKKAVNLLKSLNVE 329
Query: 371 -----KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGN 425
K++ LI+S+LE +D R I+F + T + SLL ++ K+I +
Sbjct: 330 HPKYPKLLELIKSILEKN--KDERIIVFAQYRDTVDKIVSLLE----KNGIKAIKFIGQS 383
Query: 426 NSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
+ S+K+Q E +E F+R V+V+TS+ EEG+D+ + N VI F+P + IQ
Sbjct: 384 CRDGKGMSQKQQVEAIERFKRE-GQVLVSTSVSEEGIDIPAVNYVIFFEPVPSEIRTIQR 442
Query: 486 RGRA-RMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM---Y 541
RGRA R + +++ G S E Y S K +E+ C + + Y
Sbjct: 443 RGRAMRGEGGTCYILISKGTSD-----EAYYWSALKKEREMKRTLRAICKAIEKKLKEKY 497
Query: 542 GED 544
GED
Sbjct: 498 GED 500
>gi|448357031|ref|ZP_21545738.1| Hef nuclease [Natrialba chahannaoensis JCM 10990]
gi|445650204|gb|ELZ03130.1| Hef nuclease [Natrialba chahannaoensis JCM 10990]
Length = 835
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 225/526 (42%), Gaps = 64/526 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL+ A +T+V L TG GKT +++++ A L + ++ L P LV
Sbjct: 24 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVT---ARRLDEVGG-TSLMLAPTKPLVQ 79
Query: 83 QQA----EAIKMHTDLKVGKYWGDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q A EA+K+ D ++ + GD+ D W+ AT +++ TPQ++ + L
Sbjct: 80 QHADFYREALKIPDD-EIVVFTGDVSPDDRAELWEEAT---------IVMATPQVIENDL 129
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S L + L DECH A G + Y I E YH D+ P + GM+
Sbjct: 130 VGSRISLADVTHLTFDECHRATGDYAYNYI-AERYH-----ADATDPLVTGMS------- 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD------EIPHA 248
+S D + E L +V E + T + ++ + D EI A
Sbjct: 177 -ASPGGDEEAILEVCENLGLQEVEVMTEEDADVDEFTHDT-EVEWERIDLPDEVLEIRDA 234
Query: 249 LYTHLADELAMI-ELKHTRSLE----NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL 303
L + D L + EL +S + DLN +AEL ++ ++ S +S +
Sbjct: 235 LNEVITDRLEKLKELGVAKSTQPDQSQKDLNRMRAEL-QQLINNDQSEGFKGMSVHAEVM 293
Query: 304 ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
L+ A T+ +S D S ASQ +V+ P E +S L
Sbjct: 294 KLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSD-PRVREAMRKAESFDEL 352
Query: 364 DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
K L+ L G E R I+F E TA L + LS+ +++
Sbjct: 353 HPKY--RKTRMLLAETLGLEGGE--RVIVFTESRDTAEALTAFLSDSFD-----AKRFVG 403
Query: 424 -GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
G+ G ++K+Q E+++EFR V+V+TS+ EEGLDV +LV+ ++P T
Sbjct: 404 QGDREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRS 463
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH 528
IQ +GR Q+ ++++ + D +R E Y + KE+ S
Sbjct: 464 IQRKGRTGRQSEGRVVVLMAED----TRDEAYFWISRRREKEMESE 505
>gi|339264092|ref|XP_003366828.1| endoribonuclease Dicer [Trichinella spiralis]
gi|316961980|gb|EFV48479.1| endoribonuclease Dicer [Trichinella spiralis]
Length = 325
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 22/233 (9%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIP--RCYQRLEFLGDAVLDYLITVYLYN 1207
++ E+ + Y F + + L++ALTH Y E P Y+RLEFLGDA+LDYLI+ +LY+
Sbjct: 62 DLNSFEAKIGYRFTNKAYLIQALTHSLYNEVETPVTDSYERLEFLGDAILDYLISRHLYS 121
Query: 1208 KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSF-----E 1262
SPG L+D+R+A VNN ++ +++ + A L + +N + + +
Sbjct: 122 SKRIRSPGLLSDLRAALVNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQ 181
Query: 1263 KLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMR 1322
T + PK LGDI ES+AGAIF+DS C+ V+Q ++ I +
Sbjct: 182 DDDEKETSEFAEHVEVPKPLGDIFESVAGAIFLDSHCSLATVWQVYYNMIAEEIGKQRSD 241
Query: 1323 F------------HPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGR 1363
F PVR L E + ++ + R G + V V+V G+
Sbjct: 242 FTSFNKCLCHPPISPVRHLLELEPER---VQFNILDREEGNSGVHVQVVVTGK 291
>gi|254692316|emb|CAY86112.1| retinoic acid-inducible gene-I [Cyprinidae sp. EPC]
Length = 940
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E + A QNTI+ TG GKT++A+ + ++ L ++P VFL KV +
Sbjct: 257 REYQKELTDAAEGQNTIICAPTGCGKTIVAVAICENH--LKKRPGRAKIVFLATKVDVYE 314
Query: 83 QQAEAIKMH---TD--LKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS 137
QQ + K H TD +KV GDM + + + + H+++V+T QIL++ L+
Sbjct: 315 QQYKLFKEHFSFTDPNIKVTGMCGDMAL------SVRLLIETHDIVVLTAQILVNALQSG 368
Query: 138 YF-KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L+M+ +++LDECH+ GKH Y IMT + L + +LP+I G+TAS
Sbjct: 369 EVPSLDMLSLILLDECHNTTGKHPYNNIMTRYLDTKLSSSTHSLPQIVGLTAS 421
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSE------LLPRHCTWKTKYIAGNNSGIQCQSR 434
EY + R ++FV A ++ + + L+P K + N S + ++
Sbjct: 629 EYHNNDQTRTVLFVRTRALADAMKKWIDDTDSLKFLMPGVLIGKGRKSNFNGSVMTPTNK 688
Query: 435 KKQNEIVEEFRRG-LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
K +++ F+ +++ATS+ +EG+D+ CNLV+M++ V +Q RGR R Q
Sbjct: 689 KG---VLDSFKSSDQSKILIATSVADEGIDIPQCNLVLMYEYVGNVVKMVQVRGRGRAQG 745
Query: 494 SDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDFYHVESTGT 553
S L+ + D + ++ N ++++++ A + L + Y D E
Sbjct: 746 SRCFLISSNKDRIMKEKM-------NVLKEKLVEEAIVELQKLPDLSYKVDRLQREDKAR 798
Query: 554 IATLSSS 560
+S+S
Sbjct: 799 RDHVSAS 805
>gi|448312646|ref|ZP_21502386.1| Hef nuclease [Natronolimnobius innermongolicus JCM 12255]
gi|445600842|gb|ELY54842.1| Hef nuclease [Natronolimnobius innermongolicus JCM 12255]
Length = 820
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 228/527 (43%), Gaps = 66/527 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL+ A +T+V L TG GKT +++++ A L + ++ L P LV
Sbjct: 24 RLYQLKLAGTAANDHTLVCLPTGLGKTTVSLLVT---ARRLEEVGG-TSLMLAPTKPLVQ 79
Query: 83 QQA----EAIKMHTDLKVGKYWGDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q A EA+++ D ++ + GD+ D W+ AT V++ TPQ++ + L
Sbjct: 80 QHADFYREALQI-PDEEIVVFTGDVSPDDRAAMWEDAT---------VVMATPQVIENDL 129
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S L+ + L DECH A G + Y I E YH D+ P + GM+
Sbjct: 130 VGSRISLSDVTHLTFDECHRATGDYAYNYI-AERYH-----PDARDPLVTGMS------- 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD------EIPHA 248
+S D + E L +V E + T ++ + D EI A
Sbjct: 177 -ASPGGDEEAILEVCENLGLREVEVMTEEDADVDQFTHDT-DVEWERIDLPEEVIEIRDA 234
Query: 249 LYTHLADELAMI-ELKHTRSLE----NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL 303
L + D L + EL S + DLN +AEL +K ++ S +S +
Sbjct: 235 LNDVIKDRLEKLKELGVASSTQPDQSQKDLNRMRAEL-QKLINNDQSEGFKGMSVHAEVM 293
Query: 304 ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
L+ A T+ +S D S ASQ LV+ P E ++ +F+
Sbjct: 294 KLRQAVTLVETQSVEAVRRYFDRQRNQARSSGASKASQRLVSD-PRVRE-AMRKAERFDQ 351
Query: 364 DSGLLTEKIVCLIESLLEYRGVED-IRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
+ + L E+L G+E R I+F E TA L LS+ +++
Sbjct: 352 LHPKYRKTRMLLAETL----GLEGGERVIVFTESRDTAEALTDFLSDSFD-----AKRFV 402
Query: 423 A-GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
G+ G ++K+Q E++ +FR G V+V+TS+ EEGLDV +LV+ ++P T
Sbjct: 403 GQGDREGSDGMTQKQQQEVLNDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIR 462
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH 528
IQ +GR Q+ ++++ + D +R E Y + KE+ S
Sbjct: 463 SIQRKGRTGRQSEGRVVVLMAED----TRDEAYFWISRRREKEMESE 505
>gi|336122551|ref|YP_004577326.1| helicase domain-containing protein [Methanothermococcus okinawensis
IH1]
gi|334857072|gb|AEH07548.1| helicase domain-containing protein [Methanothermococcus okinawensis
IH1]
Length = 797
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 226/520 (43%), Gaps = 60/520 (11%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQ + NALK+NT+ L TG GKT IA + + A +L K V + + P LV
Sbjct: 15 SRIYQQVIVANALKKNTLCVLGTGLGKTAIATLTI---AGMLSKKDGKVLI-VAPSRPLV 70
Query: 82 PQQAEAIKMHTDLKVGKYWGDMG--VDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
Q ++K ++ K G W+E ++ + TPQI+ + + +
Sbjct: 71 EQHYNSLKNFLNIDEDKIIVLTGKIAPSKRKKMWEE----GQIFIATPQIVENDIVANRV 126
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
N +LI DE HH G H Y + + F N + G+TASP S
Sbjct: 127 NTNDFMLLIADEAHHTTGNHSYTFVASVF---------RNKAHVLGLTASP------GSN 171
Query: 200 QDYWQKIHDLETLMNSKVYTCASESVLS--NFIPFSTAKFKFYK-YDEIPHALYTHLADE 256
D +I + + + ++ T V + K + K Y+E + L + +
Sbjct: 172 IDKILEICENLGIEHVEIRTYDDADVRDYVKTVKLRPVKVELPKEYEECINLLRSAFKER 231
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALK---AAETISC 313
L + L+ + + + ++N+++ +++KK+ I Y L ++ A+K A ET+ C
Sbjct: 232 LKV--LRDNKIIYSTNINKSELLMLQKKIMTIPDNSKYELIKMASE-AIKLDYAIETLEC 288
Query: 314 YESDFFA--WEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEK 371
D F +E+L K D+ Y +E + K +K
Sbjct: 289 QGKDAFLNYYERLGSQNTKSAKAVVRDSKVLKAVYKLRTSEI---EHPKM--------KK 337
Query: 372 IVCLIESLLEYRGVEDIRCIIFVERVITAIVLQ-----SLLSELLPRHCTWKTKYIAGNN 426
+V ++ +L + + + + I Q + + L + ++ +N
Sbjct: 338 LVEIVNRILNKKDEDKNQNKKENNKEKIIIFAQYRDTVDKIVKTLESNGINAIPFVGQSN 397
Query: 427 SGIQCQSRKKQNEIVEEFRR-GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQS 485
+ S+KKQ E VE+F+ +NV+V+TS+ EEG+D+ S N VI ++P + FIQ
Sbjct: 398 KDGKGMSQKKQVEAVEKFKNDDNINVLVSTSVSEEGIDIISVNNVIFYEPVPSEIRFIQR 457
Query: 486 RGRA-RMQNSDYLLMVKSGDSTTQSRLENYLASG-NKMRK 523
RGRA R + + ++++ T SR E Y S NK RK
Sbjct: 458 RGRASRGEGGECIILI-----TKNSRDEGYYWSAINKERK 492
>gi|300709179|ref|XP_002996756.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
gi|239606080|gb|EEQ83085.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
Length = 1131
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 151/356 (42%), Gaps = 52/356 (14%)
Query: 991 QEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLP 1050
Q D E E +GDS LKY+ S+ LF N L+S K + ++ N L ++G + L
Sbjct: 790 QNDLGYERFEFIGDSVLKYSVSKFLFTECGYNLNKLVSTK-DSLVCNDHLYRVGRQINLQ 848
Query: 1051 GFIRTESFDPKMWIIPG------DNSGSYELNDDSLFNGRKIY----VTGRKKVKS---- 1096
+ + ++ P D S LN +LF Y + RK+ +
Sbjct: 849 KYFSLNRYTEHLFQPPAILDLEFDKSLIESLNLKNLFQNNNQYNFVKLYSRKQSQDTNLE 908
Query: 1097 ---KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLV---- 1149
K AD+VE+LIG G F+ IGI + + + F ++
Sbjct: 909 KGKKVYADIVESLIGVHYIEQGFQKAWNFIKSIGILENHGSKRHSNNFMTKTPNIILLCE 968
Query: 1150 --------NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEI-PRCYQRLEFLGDAVLDYL 1200
N+ +E ++NY+F++ + +A+ H SY +Q+LE +GD LD
Sbjct: 969 YEGILPLANILKVEKIINYTFKNKGYIEKAMIHPSYKDNIFGSERFQKLELVGDCFLDLK 1028
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
++ Y++ KY P L R + VNN +A+ K GL+ S
Sbjct: 1029 VSDYIFFKYTDADPETLHTHRKSLVNNHTFAMILFKSGLYDF-----------------S 1071
Query: 1261 FEKLSLGS-TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
F LS + F V+ K GDI E+LAGA+ +DS + E+ + +L+ M
Sbjct: 1072 FTGLSDQTRDFNNNKVS---KCYGDIFEALAGAVILDSEFDFEMTDMFFKTVLKLM 1124
>gi|290559606|gb|EFD92934.1| DEAD/DEAH box helicase domain protein [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 508
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 214/503 (42%), Gaps = 68/503 (13%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ E NT+V L TG GKT+I+ ML Y L K +FL P L+
Sbjct: 11 REYQKNIFETCKSGNTLVVLPTGLGKTIISAMLA---DYRLEKYPNSKVLFLAPTKPLIN 67
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS-KHEVLVMTPQILLDGLRLSYFKL 141
Q + D+K+G G + + + EM +++++ TPQ + + ++
Sbjct: 68 QHMKTFSNIMDIKIGTASGSV------SSKKRSEMYLENQLIFATPQTIENDIKNEVIDF 121
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQD 201
+ +LI+DE HH G + Y I ++ T S P I G+TASP +SE++
Sbjct: 122 SSFSLLIVDEAHHTVGNYSYVKIAKDY------TTGSAHPLILGLTASP------ASERE 169
Query: 202 YWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIE 261
+ I + + N ++ + V Y ++ + ++ E+A +
Sbjct: 170 KIRTICNNLGITNVEIRSEEDPDVSP------------YIENKEVEVITVNMPLEIADLS 217
Query: 262 LKHTRSLENLDLNEAQAELIRKKV--SKINSTLLYCLSE----------------LGVWL 303
+K + + N + E Q+ + K V S+IN + L + G+ L
Sbjct: 218 IK-VKEMINSAILELQSSGLLKNVQQSRINRVTILLLQKSLQTQMFSGRRSFYLIRGIIL 276
Query: 304 ALKAAETISCYESDFFAWEQLDGFGETIIK--KFGSDASQALVTYVPSGAEWSIGDDSKF 361
K + Y + + L F ++K K + + LV+ I + ++
Sbjct: 277 TSKLMKLYHAY--GLVSTQSLSAFFNFLVKIEKGKAKTDKELVS---DPKFLQIKEKTED 331
Query: 362 NLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKY 421
L G+ K+ L++ LL+ ED + IIF + T + S +S + ++
Sbjct: 332 LLKKGIEHPKLEQLVQ-LLKNNFSEDKKAIIFAQYRDTVDAIYSRISSM---ENIRPVRF 387
Query: 422 IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
I G+ S+K+Q I+ +F G+ NV+V+TS+ EEG+ ++ ++ + ++ +
Sbjct: 388 IGQGKGGL---SQKEQVNIISDFESGVYNVLVSTSVSEEGMSIRGVDIAVFYETIPSAIR 444
Query: 482 FIQSRGR-ARMQNSDYLLMVKSG 503
IQ RGR R +++ G
Sbjct: 445 NIQRRGRVGRFAAGKVFILITKG 467
>gi|432110823|gb|ELK34300.1| Putative ATP-dependent RNA helicase DDX58 [Myotis davidii]
Length = 883
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 133/562 (23%), Positives = 235/562 (41%), Gaps = 75/562 (13%)
Query: 4 VSMESDTTEEVSADTLPFA-RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAY 61
+S S E S P RNYQLE AL+ +NTI+ TG GKT +A+++ +
Sbjct: 177 LSQNSCPPSEASCTQSPIKPRNYQLELARPALEGKNTIICAPTGCGKTFVALLICEHHLQ 236
Query: 62 LLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHE 121
VF ++ + QQ I + + K G G + + ++ + ++
Sbjct: 237 KFPPGQKGKIVFFANQLPVYEQQKSVILKYFERHGYKIAGISGATV-ENISVEQIVENND 295
Query: 122 VLVMTPQILLDGLRLSYF-KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
++++TPQIL++ L+ L++ ++I DECH+ H Y IM + + L L
Sbjct: 296 IIILTPQILVNSLKNGTIPSLSVFTLMIFDECHNTSKLHPYNVIMFHYLDQKLGGSSDPL 355
Query: 181 PRIFGM--TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS-----ESVLSNFIPF- 232
P++ G+ + +K ++ +Y K+ +L S V T E ++ F
Sbjct: 356 PQVIGLTASVGVGDAKNTTEATEYICKL--CASLDTSVVATVKDNLEELEGIIYKPQKFF 413
Query: 233 ------STAKFK--FYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELI--- 281
+T +FK + + +L + EL I L++ ++N + + E
Sbjct: 414 RKVKSRTTNRFKCIISELMKETESLAKSIFGELGTISLENLSQIQNRNFGTQKYEQWIVA 473
Query: 282 ------------RKKVSKINSTLLYCLSEL----GVWLALKAAETISC--YESDFFAWEQ 323
++K S+I + L S L L + A T Y DFF+ +
Sbjct: 474 VQKKCAVLHLPDKEKESRICTALFLYTSHLRKFNDALLINEHARTKDALDYLKDFFSNVR 533
Query: 324 LDGFGET---IIKKFGSDASQ-ALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESL 379
GF E + ++F + ++ PS + D +C I
Sbjct: 534 SAGFDEIEQDLTRRFEEKLQELESISMDPSNENPKLKD---------------LCFILQE 578
Query: 380 LEYRGVEDIRCIIFVERVITAIVLQ------SLLSELLPRHCTWKTKYIAGNNSGIQCQS 433
EY + R I+FV+ L+ S LS L P T + K N G+ +
Sbjct: 579 -EYHLNPETRTILFVKTRALVDALKKWIEENSKLSFLKPDILTGRGK--TSQNIGMTLPA 635
Query: 434 RKKQNEIVEEFR-RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQ 492
+K +++ FR G +++ATS+ +EG+D+ CNLVI+++ V IQ+RGR R +
Sbjct: 636 QKC---VLDAFRASGDKKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRAR 692
Query: 493 NSDYLLMVKSGDSTTQSRLENY 514
S L+ + D + ++ Y
Sbjct: 693 GSKCFLLTTNDDVIEKEKINIY 714
>gi|297836192|ref|XP_002885978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331818|gb|EFH62237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 23/208 (11%)
Query: 1135 VPYQRQFQVHAERLVN--VRHLESLLNYSFRDPSLLVEALTHGSY-MLPEIPRCYQRLEF 1191
+P++R + + + + V+ +E +LNYSF + +LL EALTH S +LP +QRL F
Sbjct: 355 LPHERSLESLSSEIDSDPVKAVEKILNYSFTNKNLLREALTHNSSNLLP-----FQRLMF 409
Query: 1192 LGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELY 1251
+G A + ++Y YP L P LT +++A+ ND YA +VK G+++ +
Sbjct: 410 VGKAGISLAFANHMYLTYPKLGPKELTMLQNANTCNDRYARVAVKRGIYQFL-------- 461
Query: 1252 KRINITVDSFEKLSLGSTFGWES------VTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
+ N+ + + G E PK L D++ES+AGA+++D + + ++
Sbjct: 462 -KCNVRTSKRQIIEFIKMLGKEDDPDPFRSVKAPKILTDLVESVAGAVYIDVNRDVKRLW 520
Query: 1306 QSIRPLLEPMITPETMRFHPVRELTEYC 1333
+ +R L EP+ T + +R P LT +C
Sbjct: 521 EILRGLFEPIYTLDDIRRKPHPLLTLFC 548
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC-YQRLEFLGDAVLDYLITVYLYNK 1208
+V +E +LNY+F D +LL EA+T S E ++RLEFLGD+VL + + ++
Sbjct: 3 SVEAVEKILNYTFTDKNLLKEAITKTSGSNTESSSLLFERLEFLGDSVLLVVFSNHIEIT 62
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL-HASHELYKRIN----------IT 1257
YP L P L D+R A+V+N+ +A +V + LH+ I+ A + L +++ +
Sbjct: 63 YPNLHPNDLNDVRIANVSNETFARVAVNNNLHQFIIFDAPNPLLHKMSHVLTNKWCHVLK 122
Query: 1258 VDSFEKLSLGSTFGWE--SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPM 1315
+ F + + + PK L D++E++AGA+++D + + V++ R L+EP+
Sbjct: 123 IKDFSEAVKEEVYPAPCGGLVKAPKFLADLVEAIAGAVYIDVDFDVQRVWEIFRVLVEPI 182
Query: 1316 ITPETMRFHPVR 1327
T + +R P R
Sbjct: 183 CTLDDLRKQPER 194
>gi|159473675|ref|XP_001694959.1| dicer-like protein [Chlamydomonas reinhardtii]
gi|158276338|gb|EDP02111.1| dicer-like protein [Chlamydomonas reinhardtii]
Length = 1927
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 33/276 (11%)
Query: 390 CIIFVERVITAIVLQSLLSELLP------RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEE 443
++F +R + + L LL+EL R + AG+++ +KQ +
Sbjct: 605 AMVFCQRKVACVALHRLLTELPAARGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRA 664
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
F G +NV+++TS+ EGLD ++CN VIM DP V F+Q GRAR S YLL +
Sbjct: 665 FSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQCAGRARAPGSCYLLFARD- 723
Query: 504 DSTTQ-----SRLE-NYLASGNKMRKEVLSHAS--LPCSPLNNHMYGEDFYHVESTGTIA 555
D Q SR E + +A K+ A P N + +D V
Sbjct: 724 DRQQQAIAKRSREEADMVAKALKLSTAAAREAQQRQQTDPPVNPFFSQDVDVVTE----- 778
Query: 556 TLSSSV--SLIYFYCSRLP---SDGYFKPTPKFH------INKEMGICTLYLPNNCPIQT 604
L ++ +L+ YC LP D +P + ++ + T+++P N P+
Sbjct: 779 ELQQNLFRNLLESYCRTLPGNSGDVLLQPYYSYQEYESPLTRRKAFVATVHMPANSPLGV 838
Query: 605 VIA--QGNIKTLKQAACLEACKKLHQIGALTDNLLP 638
V Q N +Q AC+ ++L+++GAL ++LLP
Sbjct: 839 VEGPMQSNKGDARQHACMATVRRLYELGALDEHLLP 874
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 18 TLPFARNYQLEALENALKQ-NTIVFLETGSGKTLIAI-MLLRSYAYLLRKPSPFVAVFLV 75
LP R YQ E L A + +T+++ ETG+GKT IA+ +L ++ L+ + +A FL
Sbjct: 4 ALPPLREYQAELLRMARRHASTVIYAETGTGKTRIAVERILEAHGELVA--AGRLAAFLA 61
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
P V LV QQAE + + L+V Y G+ D + A W+ + +VL TP L +
Sbjct: 62 PTVPLVRQQAEVL-VAAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIA 120
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKS 193
++ + + +++ DECHH H YA ++ F L T P + G+TASP K+
Sbjct: 121 HAFITIPQLGMIVFDECHHTNANHPYAVLLRVFVRHL--TPPDQRPVLLGLTASPHKA 176
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 26/134 (19%)
Query: 994 FHLESLETLGDSFLKYAASQQLFKTYQN---NHEGLLSVKKERIISNAALCKLGCEQKLP 1050
F E LETLGD+ LKY A+ ++ T ++ +HEG++S K++++++N AL E L
Sbjct: 1399 FDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGLQ 1458
Query: 1051 GFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGR-----KKVKSKTVADVVEA 1105
+R +D + + GR + TG ++V+ K +AD VEA
Sbjct: 1459 HHMRALPYD-----------------MERVLRGRH-WNTGEEAARAQEVRGKRLADCVEA 1500
Query: 1106 LIGAFLSTGGENVG 1119
L+G L+ G G
Sbjct: 1501 LVGCHLAPGVPTAG 1514
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 1160 YSFRDPSLLVEALTHGSYMLPEIPRC-----------------YQRLEFLGDAVLDYLIT 1202
Y F DP+L + ALTH S+ +P + YQ LEFLGDAV+ L +
Sbjct: 1650 YQFHDPALALCALTHVSWPVPPVSSSGKGLDAGAGSGGGSGGHYQLLEFLGDAVVGLLAS 1709
Query: 1203 VYLYNKYPGLSPGYLTDMRSASVNNDCYA 1231
++ Y+ G SP ++ R V ND A
Sbjct: 1710 LWAYSL--GGSPRDMSMTREMLVRNDTLA 1736
>gi|50897085|dbj|BAD34723.1| Dicer-related RNase III protein Dcr2p [Tetrahymena thermophila]
Length = 1838
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 1185 CYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHIL 1244
C QRLEFLGDAVLD +I YL+NK+P PG LT M+++ V N L ++ G +K I+
Sbjct: 1621 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1680
Query: 1245 HASHELYKRINITVDSFEKLSLGSTFGWESV--TSFPKALGDIIESLAGAIFVDSGCNRE 1302
+ + I + +++ E ++ +++ S K LGD+IESL GAIF+D+ + E
Sbjct: 1681 GSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAIFIDNNLDYE 1740
Query: 1303 VVFQSI-RPLLEPMITPETMRFHPVRELTEYCQK 1335
+ + + L ++ T + H ++ L Y +K
Sbjct: 1741 ITKKIVMETLFAEILQYFTGQEHRLKNLQLYIEK 1774
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 39/186 (20%)
Query: 45 GSGKTLIAIMLLRSY-AYLLRKPSPFVAVFLVPKVVLVPQQAEAIK---------MHTDL 94
G+GKT+IA ML+ + + P +FL V LV QQ IK M D
Sbjct: 1 GAGKTMIATMLINYFFQKQKKAPQKKKIIFLANTVQLVKQQYAEIKNNLQRISEMMENDK 60
Query: 95 KVG----------------------------KYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
++ K ++ ++ + W + +E+ VM
Sbjct: 61 EISQILKFQEGINYRRIFEKENHIVKCHGSYKQKDNLQIETFTKQKWDYLLENYEIFVMI 120
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDS-NLPRIFG 185
Q+LL+GLR Y ++ I+V+I DECHH R H Y I EFYH + LP+I+G
Sbjct: 121 GQVLLNGLRRGYIRIEDIEVIIYDECHHTRQDHPYCLIQYEFYHFHKRRNEQVQLPKIYG 180
Query: 186 MTASPI 191
+TASP+
Sbjct: 181 LTASPV 186
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 20/230 (8%)
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
KQ+E +E FR+ + +I++TS+ EEG D+ SCNLVI F+ + SF+Q +GRAR +NS
Sbjct: 558 KQSENIEAFRKKELQIILSTSVTEEGFDIPSCNLVISFNKISNLKSFVQIKGRARKENSK 617
Query: 496 YLLMVKSGDSTTQSRLENYLASGNKMRKEV------LSHASLPCSPLNNHMYGEDFYHVE 549
+++M K D + E + S + +++ + + P N+ Y V+
Sbjct: 618 FIIMAK--DKYQKQDYETDIESYKDLIQQIKEIAPKVEKQEIEIRP--NYKYK----IVK 669
Query: 550 STGTIATLSSSVSLIYFYCSRL--PSDGYFKPTPKFHIN-KEMG-ICTLYLPNNCPIQTV 605
TG I + SV+L + Y ++L D K ++I +G IC + +P+ ++T
Sbjct: 670 ETGAILNTNWSVNLFHTYANQLLYSYDSNIKGPFYYYIEITNVGFICQIIVPSQSGLKTF 729
Query: 606 IA--QGNIKTLKQAACLEACKKLHQIGALTDNLLPDIVVEKHDAQKRGNE 653
+ Q + K+ AC +A L++ + D L +I + ++Q +E
Sbjct: 730 CSNPQAQKEDAKKDACFQAVIILYRQYKIFDQYLRNISQKIQNSQSEKSE 779
Score = 40.0 bits (92), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
+ LE LGD+ L + LF + N+ G L+ K ++ N LC + + GF +
Sbjct: 1623 QRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINL---MKGFYK-- 1677
Query: 1057 SFDPKMWIIPGDNSGSYE----LNDDSLFNGRK--IYVTGRKKVKSKTVADVVEALIGAF 1110
+II E LN+ +F G +Y T + KT+ DV+E+L+GA
Sbjct: 1678 ------FIIGSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAI 1731
Query: 1111 LSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVR-HLESLLNYSFRDPSLL 1168
N+ +I ++ F + + F RL N++ ++E +L F SL+
Sbjct: 1732 FIDN--NLDYEITKKIVMETLFAEIL--QYFTGQEHRLKNLQLYIEKVLKKEFGKVSLI 1786
>gi|289581647|ref|YP_003480113.1| helicase [Natrialba magadii ATCC 43099]
gi|448282943|ref|ZP_21474225.1| Hef nuclease [Natrialba magadii ATCC 43099]
gi|289531200|gb|ADD05551.1| helicase domain protein [Natrialba magadii ATCC 43099]
gi|445575558|gb|ELY30033.1| Hef nuclease [Natrialba magadii ATCC 43099]
Length = 829
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 225/526 (42%), Gaps = 64/526 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL+ A +T+V L TG GKT +++++ A L + ++ L P LV
Sbjct: 24 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVT---ARRLDEVGG-TSLMLAPTKPLVQ 79
Query: 83 QQA----EAIKMHTDLKVGKYWGDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q A EA+++ D ++ + GD+ D W+ AT +++ TPQ++ + L
Sbjct: 80 QHADFYREALQI-PDEEIVVFTGDVSPDNRAELWEEAT---------IVMATPQVIENDL 129
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S L + L DECH A G + Y I E YH D+ P + GM+
Sbjct: 130 VGSRISLADVTHLTFDECHRATGDYAYNYI-AERYH-----ADATDPLVTGMS------- 176
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD------EIPHA 248
+S D + E L +V E + T + ++ + D EI A
Sbjct: 177 -ASPGGDEEAILEVCENLGLQEVEVMTEEDADVDEFTHDT-EVEWERIDLPDDVLEIRDA 234
Query: 249 LYTHLADELAMI-ELKHTRSLE----NLDLNEAQAELIRKKVSKINSTLLYCLSELGVWL 303
L + D L + EL +S + DLN +AEL ++ ++ S +S +
Sbjct: 235 LNEVITDRLEKLKELGVAKSTQPDQSQKDLNRMRAEL-QQLINNDQSEGFKGMSVHAEVM 293
Query: 304 ALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNL 363
L+ A T+ +S D S ASQ +V+ P E +S L
Sbjct: 294 KLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSD-PRVREAMRKAESFDEL 352
Query: 364 DSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIA 423
K L+ L G E R I+F E TA L + LS+ +++
Sbjct: 353 HPKY--RKTRMLLAETLGLEGGE--RVIVFTESRDTAEALTAFLSDSFD-----AKRFVG 403
Query: 424 -GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
G+ G ++K+Q E+++EFR V+V+TS+ EEGLDV +LV+ ++P T
Sbjct: 404 QGDREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRS 463
Query: 483 IQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH 528
IQ +GR Q+ ++++ + D +R E Y + KE+ S
Sbjct: 464 IQRKGRTGRQSEGRVVVLMAED----TRDEAYFWISRRREKEMESE 505
>gi|297804712|ref|XP_002870240.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316076|gb|EFH46499.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
Length = 214
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITV 1203
++L+ + LE +LNY F+D LLV+A T SY+ +C Y+ LE LGD++L+ I
Sbjct: 25 DQLLEIESLEKILNYKFKDKRLLVQAFTDASYV---DDKCDSYEILELLGDSILNMSIID 81
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
YP SPG LT +R+ +V+ + A +VKH L++++ H L ++I V++ EK
Sbjct: 82 EFIKLYPKESPGPLTKLRAVNVDTEKLARVAVKHQLYRYLRHKKPLLEEQILEFVEAMEK 141
Query: 1264 LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN 1300
L S + PK L DI+ES GA+F D CN
Sbjct: 142 YPLHSN----GLLKVPKVLADIVESTIGALFRD--CN 172
>gi|322368028|ref|ZP_08042597.1| Hef nuclease [Haladaptatus paucihalophilus DX253]
gi|320552044|gb|EFW93689.1| Hef nuclease [Haladaptatus paucihalophilus DX253]
Length = 806
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 221/509 (43%), Gaps = 60/509 (11%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ++ A +T+V L TG GKT +++++ + S + L P LV
Sbjct: 24 RLYQIQLAGTARNDHTLVCLPTGLGKTTVSLLVTAERFDDVGGKS----LLLAPTKPLVN 79
Query: 83 QQA----EAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
Q A EA+ + D + + G++ D WK +V++ TPQ++ + +
Sbjct: 80 QHADFYREALSI-PDEDIVVFTGEVRPDER-SELWK----SSKVIIATPQVVENDIVGGR 133
Query: 139 FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSS 198
L + + DECH A G + Y I E YH D++ P + GM+ASP K S
Sbjct: 134 IDLGPVTHVTFDECHRATGDYAYNYI-AERYH-----ADADDPLVTGMSASPGGDKESIL 187
Query: 199 EQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD----EIPHALYTHLA 254
E +H++E + +S +S + + ++ + EI AL ++
Sbjct: 188 EVCENLGLHEVEVM-------TEEDSDVSTYTHDTEVEWVRVQLPDEIIEIRDALNEVIS 240
Query: 255 DELAMIE----LKHTR-SLENLDLNEAQAELIRKKVSKINSTLLYCLSE----LGVWLAL 305
D L ++ + TR + DLN+ + +L +K + S +S + + A+
Sbjct: 241 DRLERLKDLGVINTTRPDVSQKDLNKVRGQL-QKLIDNDQSEGYQGMSAHAEVMKLRRAV 299
Query: 306 KAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVT--YVPSGAEWSI---GDDSK 360
+ AET S + Q + + S ASQ +V+ V ++ G K
Sbjct: 300 ELAETQSVESLRRYFERQRN----SARSSGASKASQRMVSEPKVQEAMRKAVQYEGRHPK 355
Query: 361 FNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTK 420
F +K+ + L E R I+F E TA L ++ L T +
Sbjct: 356 F--------QKVRTYVAETLGLNDGE--RIIVFTESRDTAETLTDFFNDELGSQLTARRF 405
Query: 421 YIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVC 480
G+ G ++K+Q E +++FR G V+V+TS+ EEGLDV +LV+ ++P T
Sbjct: 406 VGQGDKDGSDGMTQKEQQETLDKFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAV 465
Query: 481 SFIQSRGRARMQNSDYLLMVKSGDSTTQS 509
IQ +GR Q ++++ + D+ ++
Sbjct: 466 RSIQRKGRTGRQAQGQVVVLLAEDTRDEA 494
>gi|395826382|ref|XP_003786397.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 2
[Otolemur garnettii]
Length = 665
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 222/539 (41%), Gaps = 107/539 (19%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT R+ AY+ ++ + V
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKT-------RAAAYVAKRHL---------ETVDR 47
Query: 82 PQQAEAIKMHTDLKVGKYW-----GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL-- 134
+ E + D G++ GDMG A + H++L+ T ++L +
Sbjct: 48 AKHGEEFRRMLD---GRWSMVTLSGDMG----SRAGFGHLARSHDLLICTAELLQTAMTS 100
Query: 135 --RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIK 192
+ +L +L++DECHH Y I++ + L+ S LP++ G+TASP
Sbjct: 101 PEEEEHVELTAFSLLVVDECHHTHKDTVYNVILSRYLEHKLQRAPS-LPQVLGLTASPGT 159
Query: 193 SKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIP------ 246
S L+ +N + CA+ P S+ + ++Y++ P
Sbjct: 160 GGASK-----------LDGAINHILQLCANLDTWCIMSPQSSCS-QLHEYNQQPCKQYDI 207
Query: 247 -------------HALYTHLADELAMIELK-------HTRSLENLDLNEAQAELIRKKV- 285
L + D L M EL + + + +L + A+ L ++V
Sbjct: 208 CHRRSQDPFGDLLKKLMDQVHDRLDMPELSRDFGMQIYEQQMVDLSRDAAENGLQERRVY 267
Query: 286 ----SKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG----FGETIIKKFGS 337
+ N LL + ++A + ++ + DF+ E+ + E +
Sbjct: 268 ALHLRRYNDALL-------IHDTVRAVDALATLQ-DFYNRERTTKTQVLYAERWLLALFD 319
Query: 338 DASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-R 396
D AL G E + K + +L E ++ R IIF R
Sbjct: 320 DNKNALAHLATHGPE-----NPKLEVLERILQE----------QFGKPNSPRGIIFTRTR 364
Query: 397 VITAIVLQSLLSELLPRHCTWKTKYIAGN-NSGIQCQ-SRKKQNEIVEEFRRGLVNVIVA 454
+L L + + K + + G+ NSG + +++ Q E++++FR G++N++V+
Sbjct: 365 QSAHSLLLWLQQQPGLQMVDIKAQMLIGSRNSGQRAHMTQRNQQEVIQKFRIGILNLLVS 424
Query: 455 TSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
TS+ EEG+D+ CN+V+ + S +Q+RGRAR S Y + G + L N
Sbjct: 425 TSVAEEGMDIPHCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAEGSRELRRELIN 483
>gi|167046018|gb|ABZ10540.1| dicer-like protein A [Placozoa sp. DMJ-2008]
Length = 351
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 160/365 (43%), Gaps = 66/365 (18%)
Query: 990 CQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKL 1049
+E + ++ +G F+K + L++T +++ L++K+ + S L L + +
Sbjct: 4 AEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNI 63
Query: 1050 PGFIRTESFDP-KMWIIPG--------DNSGSYELNDDSLFNGRKIYVTGRKKVKS-KTV 1099
P +I ++ F+ K WI PG D+S S DS R I + S K++
Sbjct: 64 PSYIISKPFNQLKCWIPPGFTFSIRCKDDSSS-----DSALAERTIIESITDNFLSVKSI 118
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVPYQRQFQVHAERLVN-------- 1150
A+ + A++GA L E GL FL +G ++ F ++ F V E++ +
Sbjct: 119 AECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSI--SNGFDVWNEKITHMIQESNSQ 176
Query: 1151 -----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
+ E L Y F + L+ A TH S + Y++LEF+GD++L+YL+ YL
Sbjct: 177 SWLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGD-SFNYEKLEFVGDSILNYLVIKYL 235
Query: 1206 YNKYPGLSPGYLTD--------MRSASVNNDCYALSSVKHGLHKHILHASHELYKRI--- 1254
+ TD +++N+ Y L S + H H+ + S + + I
Sbjct: 236 F---------LATDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQSPFVKEMILGF 285
Query: 1255 -NITVDSFEKLSL---GSTFGW---------ESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
T D E S+ G+ W + S PK L D+ ESLA AI+ DSG N
Sbjct: 286 EKKTADLLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLAAAIYFDSGQNL 345
Query: 1302 EVVFQ 1306
V+
Sbjct: 346 STVWN 350
>gi|167046016|gb|ABZ10539.1| dicer-like protein A [Trichoplax adhaerens]
Length = 351
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 160/365 (43%), Gaps = 66/365 (18%)
Query: 990 CQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKL 1049
+E + ++ +G F+K + L++T +++ L++K+ + S L L + +
Sbjct: 4 AEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNI 63
Query: 1050 PGFIRTESFDP-KMWIIPG--------DNSGSYELNDDSLFNGRKIYVTGRKKVKS-KTV 1099
P +I ++ F+ K WI PG D+S S DS R I + S K++
Sbjct: 64 PSYIISKPFNQLKCWIPPGFTFSIRCKDDSSS-----DSALAERTIIESITDNFLSVKSI 118
Query: 1100 ADVVEALIGAFLSTGGENVGLIFLDRIGIKVD-FVNVPYQRQFQVHAERLVN-------- 1150
A+ + A++GA L E GL FL +G ++ F ++ F V E++ +
Sbjct: 119 AECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSI--SNGFDVWNEKITHMIEESNSQ 176
Query: 1151 -----VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
+ E L Y F + L+ A TH S + Y++LEF+GD++L+YL+ YL
Sbjct: 177 SWLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGD-SFNYEKLEFVGDSILNYLVIKYL 235
Query: 1206 YNKYPGLSPGYLTD--------MRSASVNNDCYALSSVKHGLHKHILHASHELYKRI--- 1254
+ TD +++N+ Y L S + H H+ + S + + I
Sbjct: 236 F---------LATDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQSPFVKEMILGF 285
Query: 1255 -NITVDSFEKLSL---GSTFGW---------ESVTSFPKALGDIIESLAGAIFVDSGCNR 1301
T D E S+ G+ W + S PK L D+ ESLA AI+ DSG N
Sbjct: 286 EKKTADLLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLAAAIYFDSGQNL 345
Query: 1302 EVVFQ 1306
V+
Sbjct: 346 STVWN 350
>gi|296202918|ref|XP_002748670.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 2
[Callithrix jacchus]
Length = 661
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 222/529 (41%), Gaps = 91/529 (17%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ E + AL+ +N I++L TG+GKT R+ AY+ R+ V +++
Sbjct: 4 RPYQQEVITPALEGKNIIIWLPTGAGKT-------RAAAYVARQHLETVDGAKFSRML-- 54
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL----RLS 137
+ T L GDMG A + H++L+ T ++L L
Sbjct: 55 ----DGRWTMTTLS-----GDMG----PRAAFGHLARCHDLLICTAKLLQMALTSPEEEE 101
Query: 138 YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI---KSK 194
+ +L ++++DECHH Y IM+++ L+ LP++ G+TASP SK
Sbjct: 102 HVELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARP-LPQVLGLTASPGTGGASK 160
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDEIPHALY 250
+ + Q +L+T + C + N P + + ++ L
Sbjct: 161 LDGAINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCKQYDLCQRRSQDPFGDLLKKLM 220
Query: 251 THLADELAMIEL-----KHTRSLENLDLNE--AQAELIRKKV-----SKINSTLLYCLSE 298
+ D L M EL K T + + L+E A A L+ ++V + N LL
Sbjct: 221 DQIHDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVYALHLRRYNDALL----- 275
Query: 299 LGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIG-- 356
+ ++A + ++ + +F+ E A T + W +
Sbjct: 276 --IHDTVRAVDALAALQ-NFYQREH------------------ATKTQILCAERWLLALF 314
Query: 357 ---DDSKFNLDSGLLTEKIVCLIESLLE--YRGVEDIRCIIFVERVITAIVLQSLLSELL 411
D +L + L + ++E +L+ +R + R IIF +A SLL L
Sbjct: 315 NDHKDMLAHLATHGLENPKLEMLEKILQKQFRSSDSPRGIIFTRTRQSA---HSLLL-WL 370
Query: 412 PRHCTWKTKYI-------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDV 464
+ +T I +GN+S ++K Q E++ +FR G +N++VATS+ EEGLD+
Sbjct: 371 QQQPGLQTVDIRPQLLIGSGNSSQRTHMTQKDQQEVIRKFRDGTLNLLVATSVAEEGLDI 430
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
CN+V+ + S +Q+RGRAR S Y + G Q L N
Sbjct: 431 PQCNVVVRYGLLTNEISMVQARGRARAGESVYSFVATKGSRELQRELIN 479
>gi|336260369|ref|XP_003344980.1| hypothetical protein SMAC_06757 [Sordaria macrospora k-hell]
gi|380095053|emb|CCC07555.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1365
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 11 TEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV 70
+++VS+ AR YQLE E +L+QN IV ++TGSGKT +A++ + A L + +
Sbjct: 55 SDQVSSPAALTARAYQLEMFEASLRQNIIVAMDTGSGKTQVAVLRI---ARELEQSDKRI 111
Query: 71 AVFLVPKVVLVPQQAEAIKMH-TDLKVGKYWGDMGVDFW-DGATWKEEMSKHEVLVMTPQ 128
FLVP V L QQ + ++ +K G GVD W D A W + ++V T Q
Sbjct: 112 W-FLVPTVALAHQQHQVLQSQIPSVKTLLICGHDGVDSWSDQAVWDAILLNVRIVVSTYQ 170
Query: 129 ILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTA 188
IL D + +L+ + ++++DE H+ H + +MTE Y G +P I G+TA
Sbjct: 171 ILSDANAHGFVRLDSLSLIVIDEAHNCSKSHPISRMMTEAYLPAKRAG-LPVPSILGLTA 229
Query: 189 SPIKS 193
SP+ S
Sbjct: 230 SPLMS 234
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 20/236 (8%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
V A+T+ + + E LE LGD+ LK+ A + N+HE LLS K+ +++N L
Sbjct: 827 VTTALTSIGSRAPTNYERLEFLGDTILKFCACLTASALFPNHHERLLSQWKDSLVNNVRL 886
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
C+ + L +I S K W + ++ L + + +++ SK VA
Sbjct: 887 CRASIDFGLDEYI-IHSMASKKW--------RPKFVENYLDDSKSPKSAETREMSSKMVA 937
Query: 1101 DVVEALIGAF-----LSTGGENVGLIFLDRIGIKVDFVNVPYQRQ--FQVHAERLVNVRH 1153
DV+E+LIGA +S E + L+ K + ++ R F++ V +
Sbjct: 938 DVIESLIGATYMCGDMSKALECIALLLPTSKSSKFKWQDIGLSRDKLFELAPNDAVLHKQ 997
Query: 1154 LESL---LNYSFRDPSLLVEALTHGS-YMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
LE L + Y+F SLL+EA+TH S L + CY+RLEFLGDA+LD ++ L
Sbjct: 998 LEPLEKAMGYAFTKKSLLIEAMTHPSCPGLGDNDSCYERLEFLGDAILDVIVVKRL 1053
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 368 LTEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLLSELLPRHCTWKTKY----- 421
L+ K+ L+ L ++ ED I+FV ERV+ +IV + ++ H K +Y
Sbjct: 403 LSSKVQTLLRILSSHQ--EDPVGIVFVQERVMVSIV-----THIISTHPLTKDRYRTAAM 455
Query: 422 -----IAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPS 476
+ G + + N+ +E FR G N++VAT++LEEG+DV CNLVI FD
Sbjct: 456 IGTANVPGRKQHFKDMTNAGDNKSLEGFREGRFNLLVATNVLEEGIDVPICNLVICFDKP 515
Query: 477 RTVCSFIQSRGRARMQNSDYLLMVK--SGDSTTQSR 510
+ SFIQ RGRAR +S LMV+ SG+S T R
Sbjct: 516 SNIKSFIQRRGRARKGSSTLYLMVQDASGESATGWR 551
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 1183 PRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKH 1242
P Y+RLEFLGD +L + + +P L+ + + VNN +S+ GL ++
Sbjct: 839 PTNYERLEFLGDTILKFCACLTASALFPNHHERLLSQWKDSLVNNVRLCRASIDFGLDEY 898
Query: 1243 ILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFV 1295
I+H+ R + + + ++S K + D+IESL GA ++
Sbjct: 899 IIHSMASKKWRPKFVENYLDDSKSPKSAETREMSS--KMVADVIESLIGATYM 949
>gi|2244899|emb|CAB10321.1| UFD1 like protein [Arabidopsis thaliana]
gi|7268289|emb|CAB78584.1| UFD1 like protein [Arabidopsis thaliana]
Length = 778
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
++L+ + LE +LNY F+D SLL++A T SY + + Y+ LE LGD++L+ I
Sbjct: 49 DQLMEIESLEKILNYKFKDKSLLLKAFTDASY-VDDKSESYELLELLGDSILNMGIIYDF 107
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLS 1265
YP +PG LT +R+ +V+ + A +V H L+ ++ H L ++I V++ EK
Sbjct: 108 IKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYP 167
Query: 1266 LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN 1300
L S + PK L DI+ES GAIF+D CN
Sbjct: 168 LHSN----GLLKVPKVLADIVESTIGAIFMD--CN 196
>gi|198428257|ref|XP_002120168.1| PREDICTED: similar to Ddx58 protein [Ciona intestinalis]
Length = 926
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
RNYQLE E AL+ N+++ TG+GKTL+A + + L R P+ + VFLVP+VVLV
Sbjct: 262 RNYQLELAEQALQGNNSLIVAPTGTGKTLVAQHICTEH--LRRNPNSKI-VFLVPRVVLV 318
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ +A + G + + A + H++ MTPQIL + L +
Sbjct: 319 EQQHDAFDSQMKYEQG-MLCKISSENTTNAAPNFLIMGHKITFMTPQILFNYLEKDCDFI 377
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLE-TGDSNLPRIFGMTASP 190
N + +LI DECHHA Y IM ++ L + G LP++ GMTASP
Sbjct: 378 NELGLLIYDECHHAMKGDPYNSIMKVYHDNLTKYNGAKPLPQVIGMTASP 427
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSE----LLPRHCTWKTKYIAGNNSGIQCQSRKK 436
E+ + +CIIFV A L + L E L P+ T G ++G +R +
Sbjct: 624 EFVDFPESKCIIFVRTRCIAKALVTCLMEDFYDLKPKQLTG-----VGASAGDGGMTRVE 678
Query: 437 QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDY 496
Q + + FR G +IVATS+ EEG D+ +CNLVI ++ S +Q +GR R + S
Sbjct: 679 QEDTISSFRDGSTKIIVATSVAEEGFDIPACNLVIAYNYSTNEIGHVQRQGRGRAKESKM 738
Query: 497 LLMVKSGDS 505
L+ G +
Sbjct: 739 FLLAYEGSA 747
>gi|291406113|ref|XP_002719437.1| PREDICTED: DEXH (Asp-Glu-X-His) box polypeptide 58-like
[Oryctolagus cuniculus]
Length = 678
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 229/538 (42%), Gaps = 88/538 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRK-----PSPFVAVFLVP 76
R YQ E + AL+ +N I++L TG+GKT R+ AY+ ++ P V V LV
Sbjct: 4 RPYQWEVIVPALEGKNIIIWLPTGTGKT-------RAAAYVAKRHLETVPGAKV-VVLVN 55
Query: 77 KVVLVPQQAEAIKMHTDLKVGKYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQIL 130
+V LV Q +E D +W GDMG A + H++L+ T ++L
Sbjct: 56 RVHLVTQHSEEFGRMLD----GHWTMTTLRGDMG----PRAGFGHLARGHDLLICTAELL 107
Query: 131 LDGLRLS----YFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
L + + +L +L++DECHH Y I++ Y L LP++ G+
Sbjct: 108 QMALTSTEEEEHVELTAFTLLVVDECHHTHKDTVYNVILSR-YLELKVHRTQPLPQVLGL 166
Query: 187 TASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCAS-ESVLSNFIPFSTAKFKFYK---- 241
TASP S + H L+ N + S E S + + + K Y
Sbjct: 167 TASPGTGGASKLDGAI---DHILQLCANLDTWRIMSPERYRSQLLQLNQKRCKQYDLCHR 223
Query: 242 -----YDEIPHALYTHLADELAMIELKH---TRSLEN----LDLNEAQAELIRKKVSKIN 289
+ ++ + + D + M EL T++ E L A+A L ++V ++
Sbjct: 224 RSQDPFGDLVRKIMDQIHDHMEMEELSRDFGTQTYEQQVVELSQAAAKAGLQEQRVHALH 283
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPS 349
L L + ++A + + + DF+ D + +
Sbjct: 284 --LRRYNDALLIHDTVRAVDALDTLQ-DFY------------------DRERTTKARILH 322
Query: 350 GAEW--SIGDDSKFNLDSGLLTEK----IVCLIESLL--EYRGVEDIRCIIFVERVITAI 401
W ++ D+ K L + L T+ + ++E++L ++R + R IIF +A
Sbjct: 323 AERWLLALFDEHKNTL-ARLATQSPENPKLEMLENILRTQFRSPDSPRGIIFTRTRQSAR 381
Query: 402 VLQSLLSELLP--RHCTWKTKYIAGNNSGIQCQSRKKQNE--IVEEFRRGLVNVIVATSI 457
L L + P + + + + G S Q ++++ ++ FR G++N++VATS+
Sbjct: 382 SL-LLWVQQQPGLQTVDIRPQMLIGAGSSSQSTHMTQRDQEEVIRRFRAGMLNLLVATSV 440
Query: 458 LEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYL 515
+EEG+D+ CN+V+ + S +Q+RGRAR S Y + G + L N +
Sbjct: 441 VEEGMDIPHCNVVVRYGLLTNEISMVQARGRARADQSVYSFVATEGSRELRRELTNEM 498
>gi|390341546|ref|XP_797737.3| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
[Strongylocentrotus purpuratus]
Length = 783
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 14 VSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAV 72
VS L +YQ+E + AL+ NT V TGSGKT +A+ + + +LRK +
Sbjct: 77 VSIGHLENLEDYQVELAKPALRGHNTCVVAPTGSGKTYVAVAVAQE---VLRKSPGKKVI 133
Query: 73 FLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLD 132
F+V +V LV +++ K + + V GD G E + K++V+V+T QIL+D
Sbjct: 134 FVVNQVSLVYKRSTVFKKYIN-DVAYICGDHGQPEITRLPLDEVLKKNDVVVLTAQILVD 192
Query: 133 GLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L N I ++ILDECH + + QY IM ++ + L T LP+I GMTAS
Sbjct: 193 ALTKGQVSFNQIGLIILDECHETKKESQYNAIMAKYMEQKL-TNKEPLPQILGMTAS 248
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 389 RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGL 448
R I+F + + + L++ + E + N G+ + Q ++++ FR G+
Sbjct: 475 RAILFTQTIASTWALKNWVMETDSLKDLHPEVLVGCRNPGMNL---RHQKDVLDNFRDGV 531
Query: 449 VNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++ATS +++G+D+ +CN V ++ + IQ+RGR R + L+V
Sbjct: 532 HKLLIATSAMQQGIDIPACNFVYRYNYITDAVARIQARGRTRKPGGRFDLVV 583
>gi|330802362|ref|XP_003289187.1| hypothetical protein DICPUDRAFT_79950 [Dictyostelium purpureum]
gi|325080763|gb|EGC34305.1| hypothetical protein DICPUDRAFT_79950 [Dictyostelium purpureum]
Length = 1059
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 130/307 (42%), Gaps = 74/307 (24%)
Query: 997 ESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTE 1056
+ LE LGDS LK A+S LF Y + EG LS+++ I N L ++ L +R
Sbjct: 789 QRLEYLGDSVLKLASSIYLFYKYSGSKEGALSMERANNIKNDNLIEVSKRMHLDEILR-- 846
Query: 1057 SFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAF-LSTGG 1115
L N +I K ADV+EAL GA L G
Sbjct: 847 -----------------------LSNSDEI---------KKPHADVIEALFGAISLDRGF 874
Query: 1116 ENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLL-NYSFR--DPSLLVEAL 1172
E I + R V +P +Q E V L +LL N R PSLL EA
Sbjct: 875 EKAYEIIV-RYVFNDSNVRLPL---YQSSMEETVLSHDLRTLLFNLDLRIDHPSLLEEAF 930
Query: 1173 THGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYAL 1232
+ G+ + YQRLEF+GD VLDY+ YLY ++P + G LT+ RS V N+
Sbjct: 931 SSGTNV------NYQRLEFVGDGVLDYITADYLYKEFPEYNEGTLTEFRSRLVRNN---- 980
Query: 1233 SSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGA 1292
++ AS L NIT + E+ +L PK LGD ESL G
Sbjct: 981 ---------NLSDASKRLKLPPNITDE--ERAALP-----------PKRLGDYFESLVGC 1018
Query: 1293 IFVDSGC 1299
+ +D G
Sbjct: 1019 LVLDRGV 1025
Score = 46.2 bits (108), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 43/214 (20%)
Query: 1091 RKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVN 1150
R K K DV I +F+ + G+ L F I V QF R+V+
Sbjct: 697 RNKYFQKNPLDVRSLGIPSFIHSIGKLAILPFYSEINWCVRLA------QFNT---RIVS 747
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY------QRLEFLGDAVLDYLITVY 1204
++ + +L +F PS LP Y QRLE+LGD+VL ++Y
Sbjct: 748 LKSYK-ILREAFTHPSTKASNRLIPPSELPMFKDYYPYLGDNQRLEYLGDSVLKLASSIY 806
Query: 1205 LYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKL 1264
L+ KY G G L+ R+ ++ ND E+ KR+++ D +L
Sbjct: 807 LFYKYSGSKEGALSMERANNIKNDNLI-----------------EVSKRMHL--DEILRL 847
Query: 1265 SLGSTFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
S + K D+IE+L GAI +D G
Sbjct: 848 S--------NSDEIKKPHADVIEALFGAISLDRG 873
>gi|448354594|ref|ZP_21543350.1| Hef nuclease [Natrialba hulunbeirensis JCM 10989]
gi|445637482|gb|ELY90632.1| Hef nuclease [Natrialba hulunbeirensis JCM 10989]
Length = 833
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 226/527 (42%), Gaps = 66/527 (12%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQL+ A +T+V L TG GKT +++++ A L + ++ L P LV
Sbjct: 24 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVT---ARRLDEVGG-TSLMLAPTKPLVQ 79
Query: 83 QQA----EAIKMHTDLKVGKYWGDMGVD----FWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q A EA+++ D ++ + GD+ D W+ AT V++ TPQ++ + L
Sbjct: 80 QHADFYREALQIPDD-EIVVFTGDVSPDDRAELWEEAT---------VVMATPQVIENDL 129
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
S L + L DECH A G + Y I E YH A P+ +
Sbjct: 130 VGSRISLADVTHLTFDECHRATGDYAYNYI-AERYHT--------------DAADPLVTG 174
Query: 195 VSSSEQDYWQKIHDL-ETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYD------EIPH 247
+S+S + I ++ E L +V E + T + ++ + D EI
Sbjct: 175 MSASPGGDEEAILEVCENLGLQEVEVMTEEDADVDEFTHDT-EVEWERIDLPDEVLEIRD 233
Query: 248 ALYTHLADELAMI-ELKHTRSLE----NLDLNEAQAELIRKKVSKINSTLLYCLSELGVW 302
AL + D L + EL +S + DLN +AEL ++ ++ S +S
Sbjct: 234 ALNEVITDRLEKLKELGVAKSTQPDQSQKDLNRMRAEL-QQLINNDQSEGFKGMSVHAEV 292
Query: 303 LALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFN 362
+ L+ A T+ +S D S ASQ +V+ P E +S
Sbjct: 293 MKLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSD-PRVREAMRKAESFDE 351
Query: 363 LDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
L K L+ L G E R I+F E TA L + LS+ +++
Sbjct: 352 LHPKY--RKTRMLLAETLGLEGGE--RVIVFTESRDTAEALTAFLSDSFD-----AKRFV 402
Query: 423 A-GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCS 481
G+ G ++K+Q E+++EFR V+V+TS+ EEGLDV +LV+ ++P T
Sbjct: 403 GQGDREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIR 462
Query: 482 FIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSH 528
IQ +GR Q+ ++++ + D +R E Y + KE+ S
Sbjct: 463 SIQRKGRTGRQSEGRVVVLMAED----TRDEAYFWISRRREKEMESE 505
>gi|260809270|ref|XP_002599429.1| hypothetical protein BRAFLDRAFT_106572 [Branchiostoma floridae]
gi|229284707|gb|EEN55441.1| hypothetical protein BRAFLDRAFT_106572 [Branchiostoma floridae]
Length = 1279
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSY 59
M P+ E+ +P R YQ+E AL+ +NTI+ TGSGKT +AI + R +
Sbjct: 879 MTPLQDAKPPPEQSEMKDIPM-RGYQVELAMPALEGRNTIICAPTGSGKTRVAIKITRDH 937
Query: 60 AYLLRKPSPF----------VAVFLVPKVVLVPQQAEAIKMHTDLK--VGKYWGDMGVDF 107
L + F VFLV KV LV QQ A + + K + G+ D
Sbjct: 938 ---LEGGAAFEVGAGVDARRRVVFLVNKVPLVEQQCNAFREYLSPKYDILPLSGETAADI 994
Query: 108 WDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTE 167
G T + +H+V+++T Q+L + LR L+ +LI DECHH + Y IMT
Sbjct: 995 PVGET----LPEHDVIILTAQVLENALRDELITLDTFSMLIFDECHHCQKNDPYNAIMTT 1050
Query: 168 FYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQ 200
+ + +E + LP+I G+TAS K S ++
Sbjct: 1051 YIKQKVEQSSARLPQIIGLTASLGVGKAKSQKE 1083
>gi|297794783|ref|XP_002865276.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
gi|297311111|gb|EFH41535.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
Length = 892
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E +LNYSF + +LL E LTH + L +QRL F+G+ L T +LY Y
Sbjct: 349 SVEAVEKILNYSFVNKNLLNELLTHNTSPL------FQRLMFVGEPALSLAFTKHLYLTY 402
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P L P L+ +R A+ ND YA +VK G+++ I+ + + I +D K
Sbjct: 403 PKLEPKDLSLLRDANACNDRYARVAVKKGIYQFIISNVEKPERMILDFIDMMGKEDDPDP 462
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHP 1325
+ V + PK L +++ ++AGA+++D N + +++ R L EP+ T + +R P
Sbjct: 463 DPYRVVKA-PKILANLVAAVAGAVYIDVNYNVQRLWEIFRGLFEPIYTLDDLRMQP 517
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
+V +E +LNYSF + +LL +A+T S + + RLEF GD+VL+ T Y+ + Y
Sbjct: 3 SVEAVEKILNYSFTNKTLLKDAITQRSTL-------FDRLEFFGDSVLEVAFTNYIRHTY 55
Query: 1210 PGLSPGYLTDMRSASVNNDCYA 1231
P L L D+R+A+V+N+ +A
Sbjct: 56 PNLKVKELCDLRTANVSNEKFA 77
>gi|226497706|ref|NP_001145700.1| uncharacterized protein LOC100279204 [Zea mays]
gi|219884081|gb|ACL52415.1| unknown [Zea mays]
Length = 270
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 37/278 (13%)
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
M+ ++I DECHHA G H Y IM EFYH G + P +FGMTASPI K SS+ D
Sbjct: 1 MVSLMIFDECHHATGNHPYTRIMKEFYH-----GSEHKPNVFGMTASPIIRKGVSSDLDC 55
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK-----YDEIPHALYTHLADEL 257
++ +LE +++SK+++ + +P + ++Y+ +D++ L +
Sbjct: 56 KNQLSELENILDSKIHSVVDREEIELCVPSAKEVNRYYEPRTVSFDDLSEELEILCSKYD 115
Query: 258 AMIELKHTRSLENL-DLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYES 316
+I H RS D +E E RK++S + + YCL + G+ A +A + I
Sbjct: 116 GLIIQLHNRSTNQYKDADEITKE-SRKRLSNSLAKICYCLEDAGLLCASEATK-ICIERG 173
Query: 317 DFFAWEQLDGFGETIIKKFGSDAS--------------QALVTYVPSGAEWSIGDDSKFN 362
W L G +T ++ G + Q ++ + + G D+ N
Sbjct: 174 QRKGW--LKGGSDTTDQQSGQNGPILFAEISMLHMEFFQEVLDIIGKRVQQQQGIDALLN 231
Query: 363 LDSGL--------LTEKIVCLIESLLEYRGVEDIRCII 392
+ G ++ K+ L++ L + +++RC+I
Sbjct: 232 SERGCVEAKNMGYISPKLYELMQVFLSFSDPDNVRCLI 269
>gi|291278588|ref|YP_003495423.1| ribonuclease III [Deferribacter desulfuricans SSM1]
gi|290753290|dbj|BAI79667.1| ribonuclease III [Deferribacter desulfuricans SSM1]
Length = 231
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 95/189 (50%), Gaps = 25/189 (13%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYML-PEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
N+ LE L+ Y F++ SLL+EALTH SY ++ R Y+RLEFLGD+VL ++T YL K
Sbjct: 3 NIEELEELIGYRFKNKSLLLEALTHSSYAYEKKLKRNYERLEFLGDSVLQLIVTEYLVIK 62
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
Y G L+ RS V+ D + ++K L+ ++ E+ +S G
Sbjct: 63 YKEFKEGVLSKYRSFFVSEDIISEIALKIRLNDFLMLGKGEI-------------VSGGY 109
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCN--REVVFQSIRPLLEPMITPETMRFHPV 1326
T P L DI ESL GA+++D G N R +V + L++ I + P
Sbjct: 110 TK--------PSILADIFESLLGAVYLDGGYNEARRIVLMLMSELMDEYIEKGII-IDPK 160
Query: 1327 RELTEYCQK 1335
EL + Q+
Sbjct: 161 TELQKITQQ 169
>gi|148670595|gb|EDL02542.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_a [Mus musculus]
Length = 609
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 194/450 (43%), Gaps = 60/450 (13%)
Query: 98 KYW------GDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLS----YFKLNMIKVL 147
K+W GDMG G + H++L+ T ++L L S + +L ++
Sbjct: 4 KHWTVTTLSGDMGSRAGFGLMAR----SHDLLICTAELLQLALNSSEEDEHVELREFSLI 59
Query: 148 ILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI---KSKVSSSEQDYWQ 204
++DECHH Y I++ + + L+ + LP++ G+TASP +K+ + Q
Sbjct: 60 VVDECHHTHKDTVYNTILSRYLEQKLKKAEP-LPQVLGLTASPGTGGATKLQGAIDHILQ 118
Query: 205 KIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK----YDEIPHALYTHLADELAMI 260
+L+T C S+ ++ N P + + ++ L + +L M
Sbjct: 119 LCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGDLIKKLMNQIHQQLEMP 178
Query: 261 ELK-------HTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISC 313
+LK + + + L + A+A L ++V ++ L L + ++A + +
Sbjct: 179 DLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALH--LRRYNDALFIHDTVRARDALDM 236
Query: 314 YESDFFAWEQLDGF----GETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLT 369
+ DF+ E+ E+ + K D L G E + K +
Sbjct: 237 LQ-DFYDRERTTKTQMVRAESWLLKLFDDHKNVLGQLAARGPE-----NPKLEM-----L 285
Query: 370 EKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTW----KTKYI--A 423
E+I+ L ++ R IIF TA SLL L + C K + + A
Sbjct: 286 ERIL-----LKQFGSPGHTRGIIFTRTRQTA---SSLLLWLRQQPCLQTVGIKPQMLIGA 337
Query: 424 GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
GN S ++K Q E+++EFR G+++++VATS+ EEGLD+ CN+V+ + S +
Sbjct: 338 GNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMV 397
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
Q+RGRAR S Y + G + L N
Sbjct: 398 QARGRARAGQSVYSFLATEGSREMKRELTN 427
>gi|355683890|gb|AER97225.1| DEXH box polypeptide 58 [Mustela putorius furo]
Length = 453
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 217/491 (44%), Gaps = 85/491 (17%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N IV+L TG+GKT R+ AY+ ++ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIVWLPTGAGKT-------RAAAYVAKRHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E D + + GDMG A + H++++ T ++L L
Sbjct: 57 VHLVSQHCEEFSRMLDRRWAIITLSGDMG----PRAGFGHLARSHDLIICTAELLQMALT 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-HRLLETGDSNLPRIFGMTASP 190
+ +LN +L++DECHH Y I++ + H+L T LP++ G+TASP
Sbjct: 113 SPEEEEHVELNAFSLLVVDECHHTHKDTVYNVILSRYLEHKLQRT--RPLPQVLGLTASP 170
Query: 191 IKSKVSSSE---QDYWQKIHDLET--LMNSKVYTCASESVLSNFIPFSTAKFKF-YKYDE 244
S+ + Q +L+T +M+ + Y L P ++ ++ +
Sbjct: 171 GTGGASTLKGAIDHILQLCANLDTWRIMSPQTY----RPQLQELRPQPCKQYNLCHRRTQ 226
Query: 245 IPHA-----LYTHLADELAMIELKHTRSLEN-----LDLNEAQAELIRKKVSKINSTLLY 294
P L + + L M+EL +N ++L++A AE + + +Y
Sbjct: 227 DPFGDTLKKLMDQIHNRLEMLELSRDFGTQNYEQQVVELSQAAAE------AGLQERRVY 280
Query: 295 CLSELGVWLALKAAETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEW- 353
L AL +T+ + A + L F D +A T + W
Sbjct: 281 ALHLRRYNDALLIHDTVRAVD----ALDSLRDF---------YDKERATKTQILQAERWL 327
Query: 354 -SIGDDSKFNLDSGLLT-----EKIVCLIESLLE-YRGVEDI-RCIIFVERVITAIVLQS 405
++ DD K L + L T K+ L + L E + G +D+ R IIF + T + S
Sbjct: 328 LALFDDYKNEL-AHLATCSPENPKLETLEQILREQFGGSDDLPRGIIFTQ---TRQSVHS 383
Query: 406 LLSELLPRHCTWKTKYI-------AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
LL L + KT I AGN+S +++ Q E++ +FR G +N++VATS+
Sbjct: 384 LLL-WLQQQPGLKTMDIRADVLIGAGNSSQNTHMTQRDQQEVIRKFRTGTLNLLVATSVA 442
Query: 459 EEGLDVQSCNL 469
EEGLD+ CN+
Sbjct: 443 EEGLDIPQCNV 453
>gi|148878063|gb|AAI46129.1| LGP2 protein [Bos taurus]
Length = 480
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 216/508 (42%), Gaps = 84/508 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV----AVFLVPK 77
R YQ E + AL+ +N I++L TGSGKT R+ AY+ R+ V V LV +
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKT-------RAAAYVARRHLETVDGAKVVVLVNR 56
Query: 78 VVLVPQQAEAIK--MHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
V LV Q E + + GDMG A + H++L+ T ++L L
Sbjct: 57 VHLVTQHCEEFSRMLERRWTITTLSGDMG----PRAGFGHVARGHDLLICTAELLQKALA 112
Query: 135 ---RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPI 191
+ +LN +L++DECHH Y I++++ L+ LP++ G+TASP
Sbjct: 113 SPEEEEHVELNAFSLLVVDECHHTHKDTVYNIILSQYLELKLQR-TRPLPQVLGLTASPG 171
Query: 192 KSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLS-NFIPFSTAKFKFYK--------- 241
VS+ E H L+ N + S S S K Y
Sbjct: 172 TGGVSTLEGAI---DHVLQLCANLDTWCIMSPKDHSPQLQEHSHQPCKQYDLCHRRTQDP 228
Query: 242 YDEIPHALYTHLADELAMIELKH---TRSLEN----LDLNEAQAELIRKKV-----SKIN 289
+ ++ L + D L M +L+ T++ E L + A+A L+ ++V + N
Sbjct: 229 FGDMLKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYN 288
Query: 290 STLLYCLSELGVWLALKAAETISCYESDFFAWEQLDG----FGETIIKKFGSDASQALVT 345
LL + ++A + ++ DF+ E+ E + D L
Sbjct: 289 DALL-------IHDTVRAVDALNTLR-DFYNRERTTKTQILHAERWLLALFDDHKNELAR 340
Query: 346 YVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVE-RVITAIVLQ 404
SG E + K + +L ++R + R IIF R +L
Sbjct: 341 LATSGPE-----NPKLEVLEAILQR----------QFRSPDSPRGIIFTRTRQSAHSLLL 385
Query: 405 SLLSELLPRHCTWKTKYIAG--NNSG----IQCQSRKKQNEIVEEFRRGLVNVIVATSIL 458
L + + + + + G NNS IQ R +Q E++++FR G +N++VATS+
Sbjct: 386 WLQQQPGLQTVDIRPQVLTGAGNNSQKTQMIQMTQRDQQ-EVIQKFRTGTLNLLVATSVA 444
Query: 459 EEGLDVQSCNLVIMFD-PSRTVCSFIQS 485
EEGLD+ CN+V+ + + T+C+ +++
Sbjct: 445 EEGLDIPQCNVVVRYGLLTLTMCNMLRA 472
>gi|198430581|ref|XP_002121377.1| PREDICTED: similar to DEAD/H box polypeptide RIG-I [Ciona
intestinalis]
Length = 1013
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 25/208 (12%)
Query: 5 SMESDTTEEV-SADTLP--FARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYA 60
+ME+ T+E+V ++LP R+YQLE E A+ +N+++ TGSGKT +A+ + + +
Sbjct: 280 AMETCTSEDVCQEESLPELNLRDYQLELAEQAMSGENSLIVAPTGSGKTFVALKVCKDH- 338
Query: 61 YLLRKPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMS-- 118
+ ++P V VF+VP+V L+ QQ E K + GD G + E +S
Sbjct: 339 -IEKRPDSRV-VFMVPRVPLIKQQYELFKC--------FLGD-GQGILRAISTDETLSAP 387
Query: 119 ------KHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL 172
H++ +TPQIL++ LR +N + +LI DECHH Y IM ++ L
Sbjct: 388 ADRLILDHKISFLTPQILVNLLRQDPSFINKLGLLIFDECHHTVKGDPYNSIMKIYHDNL 447
Query: 173 LETGDSN-LPRIFGMTASPIKSKVSSSE 199
L+ + LP+I G+TASP S E
Sbjct: 448 LKNRRLDILPQIVGLTASPGVGSAKSDE 475
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC--QSRKKQN 438
E+ + +CIIFV A L + + E K + G + ++ ++ Q
Sbjct: 665 EFTKQPESKCIIFVRTRPIAKALITCIEESEVEKLHLNPKQLTGAGAAVELGGMTKATQE 724
Query: 439 EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLL 498
+ + FR G VIVATS+ EEGLD+++CNL+I ++ S +Q +GR R + S ++
Sbjct: 725 DTIASFRDGRCKVIVATSVAEEGLDIKACNLIITYNYSTNEIGQVQRQGRGRAKGSKMII 784
Query: 499 MVKSGDSTTQSRLENYL 515
+ S Q N +
Sbjct: 785 LAYDDSSHIQREKSNII 801
>gi|72010927|ref|XP_783556.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
[Strongylocentrotus purpuratus]
Length = 927
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 24 NYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
+YQ+E E AL+ NT V TGSGKT +A+ + + +LRK +F+V +V LV
Sbjct: 234 DYQVELAEPALQGHNTCVVAPTGSGKTYVAVAVAQE---VLRKSPGKKVIFVVNQVPLVH 290
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ+ K + V GD G + + K++V+V+T QIL+D L N
Sbjct: 291 QQSTVFKKYIK-DVAYICGDHGQPQITRLPMDQVLRKNDVVVLTAQILVDALTKGQVSFN 349
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
I +++ DECH + QY IM ++ + L+ LP+I GMTAS
Sbjct: 350 QIGIIVFDECHETKKDSQYNAIMAKYMEQKLKNKKP-LPQILGMTAS 395
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 389 RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGL 448
R I+F + + + LQ + E + N G+ + Q ++++ FR G+
Sbjct: 622 RAILFTQTIASTWALQKWVMETDSLKDLHPEVLVGCRNPGMNL---RHQTDVLDNFRNGV 678
Query: 449 VNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
+++ATS++++G+D+ +CN V ++ + IQ+RGR R + L+V
Sbjct: 679 HKLLIATSVIQQGIDIPACNFVYRYNYITDAVARIQARGRTRKPGGRFDLVV 730
>gi|400595357|gb|EJP63162.1| type III restriction enzyme [Beauveria bassiana ARSEF 2860]
Length = 1213
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 219/525 (41%), Gaps = 80/525 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ ++N+L NT+V L TG GKT IA ++ ++ +K VF+ P LV
Sbjct: 152 RDYQFSIVKNSLFNNTLVALPTGLGKTFIAATVMLNFYRWTKKGK---IVFVAPTKPLVA 208
Query: 83 QQAEAI-------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
QQ +A + T L G + +EE + V MTPQ LL+ L
Sbjct: 209 QQIDACYNIAGIPRSETTLLTGDVQPVL---------REEEWERRRVFFMTPQTLLNDLS 259
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
Y I ++++DE H A G++ YA + + R S R+ +TA+P
Sbjct: 260 HGYADPKSICLIVVDEAHRATGEYAYAKV-AKLIRRF-----SKSFRVLALTATP----- 308
Query: 196 SSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLAD 255
S+ + Q+I D + + ++ T S + + Y +D L +D
Sbjct: 309 -GSKIETVQEIIDNLGISHCEIRTEDSIDI------------RQYVHDRNIEQLVLDPSD 355
Query: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYE 315
E+ ++ + +L+ L L++ A+ I S ++ + L W+A + +
Sbjct: 356 EINLVSELFSEALKPL-LDKLSAQNIWYGKSPMSISAFGLLQSQNEWMATRGKHVNQGVQ 414
Query: 316 SDFFA-WEQLDGFGETI-------IKKF-----------------GSDASQALVTYVPSG 350
A + L +I IK F GS + L+ + PS
Sbjct: 415 FMMRAIFSVLTSLAHSIKLLTFHGIKPFYDNLLDFRREQEEKGQKGSKYKRQLIEH-PSF 473
Query: 351 AEWSIGDDSKFNLDSGLLTEKIVCLIESLLEY---RGVED-IRCIIFVERVITAIVLQSL 406
+ S D + K L +++L + RG + R I+F E +A + L
Sbjct: 474 KDMMDKIASWMKRDGFVGHPKQTALADTVLNHFMDRGEDSGTRVIVFSEYRDSAEDIVRL 533
Query: 407 LSELLPRHCTWKTKYIAGNNSGIQCQSRK--KQNEIVEEFRRGLVNVIVATSILEEGLDV 464
L+ P K G G + + K +Q E VE+FR G NV+VATSI EEGLD+
Sbjct: 534 LNMHAP---LVKASIFVGQAVGKRGEGMKQAQQIETVEKFRNGHFNVLVATSIGEEGLDI 590
Query: 465 QSCNLVIMFDPSRTVCSFIQSRGR-ARMQNSDYLLMVKSGDSTTQ 508
+L++ +D S + +Q GR R + + +L++ G Q
Sbjct: 591 GQVDLIVCYDASASPIRMLQRMGRTGRKRAGNIVLLLMRGKEEDQ 635
>gi|406913885|gb|EKD53182.1| hypothetical protein ACD_61C00122G0015 [uncultured bacterium]
Length = 234
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 26/154 (16%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYM-LPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
N+ L+ L+ Y F++ SLL ALTH S + P + Y+RLEFLGDA+L+ LI++YL+ K
Sbjct: 5 NLDPLQDLIGYHFKNESLLETALTHRSCLNQPGVSESYERLEFLGDAILEMLISIYLFEK 64
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP GYLT RSA+V + + SV + + +I ++S G
Sbjct: 65 YPDKMEGYLTAARSATVRTESLSEVSVHNRFNDYI-------------------RMSKGE 105
Query: 1269 --TFGWESVTSFPKALGDIIESLAGAIFVDSGCN 1300
T G ++++ L D+IESL GA+++D G +
Sbjct: 106 EVTGGRQNLS----ILEDVIESLIGALYIDGGLD 135
>gi|290988185|ref|XP_002676802.1| predicted protein [Naegleria gruberi]
gi|284090406|gb|EFC44058.1| predicted protein [Naegleria gruberi]
Length = 649
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 231/525 (44%), Gaps = 92/525 (17%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQ+E +L N+++ L TG GKTL++++L++ + L P VA F+V K+ L
Sbjct: 200 RDYQVEMYFQSLFTNSLICLPTGLGKTLVSVLLMKKMSVL--NPEKLVA-FVVNKIPLAF 256
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ++ T+ K A E + K EV V DGL L+ F+
Sbjct: 257 QQSDYYITETEDKSLVLCSQTRT-----AESIERLRKREVQVC---FFTDGLLLNLFENR 308
Query: 143 MIK-----VLILDECHHARGKH-QYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVS 196
M++ +++ DE HH + +Y + F + +I G+TASP+
Sbjct: 309 MLRPEDFSMVVFDEIHHGISPNSRYNLLGAAF------RNSQSRVKITGLTASPL----- 357
Query: 197 SSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADE 256
D + L S +K D + + T ++
Sbjct: 358 -----------DFQQLEVS------------------------FKIDSVSYPFLTR--EK 380
Query: 257 LAMIELKHTRSLENLDLNEAQAELIRK---KVSKINSTLL-YCLSEL---GVWLALKAAE 309
+ +E + + + + Q +LI K +V +N LL Y ++ L G ++++
Sbjct: 381 MREMENTASTKIRKTSMKQEQIQLISKFKEEVCLLNEQLLEYKINNLWHFGSFISIIGYL 440
Query: 310 TISC---YESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSG 366
+ YES + + L G +++ ++ + Y+ S + + KF+ +
Sbjct: 441 RLHIPPQYES--ISQKMLKFIG--LMEMTNILGTKEALEYLESSKDLEYSKE-KFSNITR 495
Query: 367 LLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
+E+ L ES+L + +D R ++FV+ + L +L + + + I G
Sbjct: 496 SFSERFGVL-ESILN-KTKDDSRILVFVKTKEMSFRLTRMLERKFKQ---FYPQRIVGQY 550
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
+Q ++EEF+ ++V+TS+LEEG+D+ CN+V++FD + ++ IQ+R
Sbjct: 551 GAGGMNYENEQRVLIEEFKNHECKLLVSTSVLEEGIDISDCNIVVLFDGNLSLRRIIQAR 610
Query: 487 GRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASL 531
GRAR + S + L+++ + ++E K KE+++ SL
Sbjct: 611 GRARQKKSTFHLLIEEEEQNYYEQIE-------KEEKEMITKISL 648
>gi|242092492|ref|XP_002436736.1| hypothetical protein SORBIDRAFT_10g007863 [Sorghum bicolor]
gi|241914959|gb|EER88103.1| hypothetical protein SORBIDRAFT_10g007863 [Sorghum bicolor]
Length = 140
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 742 VLLCRRFQITLFRVIMDHNLDKL-NEILDGFELRDNLEIDYLLLPSTGQLIDW---KTVA 797
V++ RRFQ T+ +++ ++L ++ N E++ + YLLLP IDW K A
Sbjct: 1 VIVDRRFQTTILSLLISNDLLEVSNSFKRLLEMQVSPGAVYLLLPVVSGKIDWCNTKFSA 60
Query: 798 TVLFPRDNGS-KHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGH 856
+ + N +HN +C K GP C C + NS+V TPHNG Y ++G +
Sbjct: 61 SEMLEDINMDIRHNHSC-----------KGGPFCPCMLQNSVVYTPHNGSFYAVSG-FRY 108
Query: 857 LNANSLFTRNNGSVTTYKKHYEERYGIQL 885
LNANSL R +GSV +YK H++ER+GI L
Sbjct: 109 LNANSLMHRRDGSVLSYKTHFKERHGIDL 137
>gi|379055829|emb|CCD32418.1| dicer-1b, partial [Acyrthosiphon pisum]
gi|379055831|emb|CCD32419.1| dicer-1b, partial [Acyrthosiphon pisum]
gi|379055837|emb|CCD32422.1| dicer-1b, partial [Acyrthosiphon pisum]
gi|379055843|emb|CCD32425.1| dicer-1b, partial [Acyrthosiphon pisum]
Length = 272
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 20/213 (9%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+TT + + LE LET+GDSFLKYA + L+ T+ N HEG+LS + +S
Sbjct: 64 PSI-LLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVS 122
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L +LG + + + F+P+ +P G ++L + ++ N I +T +
Sbjct: 123 NLNLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKL-EKAVINS-NISIT-QHITND 179
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYQRQFQVHAERLVN-- 1150
K++AD VEALIGA+L + G L+F+ +GI V D + Y + R VN
Sbjct: 180 KSIADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPSPLLRNVNDP 239
Query: 1151 ----------VRHLESLLNYSFRDPSLLVEALT 1173
E L Y F+D S L++A+T
Sbjct: 240 EGELTKLMDGFESFEQHLGYYFQDRSYLLQAMT 272
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 1165 PSLLVEALTHGS----YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
PS+L++ALT + Y L +RLE +GD+ L Y +T YLY + + G L+D+
Sbjct: 64 PSILLQALTTANAIDGYDL-------ERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDL 116
Query: 1221 RSASVNN-DCYALSSVKHGLHKHILHASHELYKRIN------ITVDSFEKLSLGSTFGWE 1273
RS V+N + Y L +K + I S + R N I EK + S
Sbjct: 117 RSNHVSNLNLYRLGKLKMFGERMI---STKFEPRSNWLPPCYIGPHKLEKAVINSNISIT 173
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQS 1307
+ K++ D +E+L GA + G ++F S
Sbjct: 174 QHITNDKSIADCVEALIGAYLISCGTRGALLFMS 207
>gi|341583122|ref|YP_004763614.1| Hef nuclease [Thermococcus sp. 4557]
gi|340810780|gb|AEK73937.1| Hef nuclease [Thermococcus sp. 4557]
Length = 778
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 223/518 (43%), Gaps = 90/518 (17%)
Query: 39 IVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQQAEAIKM-----HTD 93
+V L TG GKTLIA+++ Y L + V + L P L Q AE+ + H
Sbjct: 27 LVVLPTGLGKTLIAMLIA---DYRLSRYGGKV-LMLAPTKPLAIQHAESFRRLFNLPHER 82
Query: 94 LKV--GKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDE 151
+ V G+ + W+ +T ++ TPQ + + + L + +L++DE
Sbjct: 83 INVLTGELSPEKRRRVWEEST---------IITATPQTVENDILTGRISLEDVSLLVIDE 133
Query: 152 CHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLET 211
H A G + Y I E+ L+T + P + G+TASP S+ D ++I +
Sbjct: 134 AHRAVGGYSYVFIAREY----LKT--ARHPLVLGLTASP------GSDADKIREIVENLG 181
Query: 212 LMNSKVYTCASESVLS--NFIPFSTAKFKFYK-YDEIPHALYTHLADELAMIELKHTRSL 268
+ + +V T AS V I F K + + Y E+ L L + L + S
Sbjct: 182 IEHVEVRTEASPDVKPYVQSIAFEWVKVELPEIYKEVRKLLREMLKESLKPLAQFKLVST 241
Query: 269 ENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAETISCYESDFFAWEQLDGFG 328
+ D+++ + + + SKIN + E+G L L A+ + A E L+ G
Sbjct: 242 YSPDISKRE---VLQAGSKINQEVARGNYEIG-RLRLHQAKAVKLQ----HAIELLETQG 293
Query: 329 ----ETIIKKFGSD----ASQAL--------VTYVPSGAEWSIGDDSKFNLDSGLLTEKI 372
T +KK D +S+ L V Y+ A+ S D K E++
Sbjct: 294 LTALRTYLKKLREDKRAKSSKQLMEDPRMRKVVYLLVQAKESGVDHPKM--------ERL 345
Query: 373 VCLIESLLEYRGVEDIRCIIFV------ERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
L++ LE + D + I+F R++ + + +E + G +
Sbjct: 346 KELVKRQLERK--PDSKVIVFTNYRDTGRRIVEELEAMGIAAERFIGQAS------RGKD 397
Query: 427 SGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSR 486
G+ S+KKQ E+++ F R NV+VATS+ EEGLDV +LV+ ++P + IQ R
Sbjct: 398 KGM---SQKKQKEVLDRFSRAEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRR 454
Query: 487 GR-ARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRK 523
GR R + ++++ G +R E Y S + K
Sbjct: 455 GRTGRHRQGKVVILMARG-----TRDEAYYWSSKRKEK 487
>gi|379055841|emb|CCD32424.1| dicer-1b, partial [Acyrthosiphon pisum]
Length = 272
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 20/213 (9%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+TT + + LE LET+GDSFLKYA + L+ T+ N HEG+LS + +S
Sbjct: 64 PSI-LLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVS 122
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L +LG + + + F+P+ +P G ++L + ++ N I +T +
Sbjct: 123 NLNLYRLGKLKMFGERMISTKFEPRSNWLPPCYIGPHKL-EKAVINS-NISIT-QHITND 179
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYQRQFQVHAERLVN-- 1150
K++AD VEALIGA+L + G L+F+ +GI V D + Y + R VN
Sbjct: 180 KSIADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPSPLLRNVNDP 239
Query: 1151 ----------VRHLESLLNYSFRDPSLLVEALT 1173
E L Y F+D S L++A+T
Sbjct: 240 EGELTKLMDGFESFEQHLGYYFQDRSYLLQAMT 272
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 1165 PSLLVEALTHGS----YMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDM 1220
PS+L++ALT + Y L +RLE +GD+ L Y +T YLY + + G L+D+
Sbjct: 64 PSILLQALTTANAIDGYDL-------ERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDL 116
Query: 1221 RSASVNN-DCYALSSVKHGLHKHILHASHELYKRIN------ITVDSFEKLSLGSTFGWE 1273
RS V+N + Y L +K + I S + R N I EK + S
Sbjct: 117 RSNHVSNLNLYRLGKLKMFGERMI---STKFEPRSNWLPPCYIGPHKLEKAVINSNISIT 173
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQS 1307
+ K++ D +E+L GA + G ++F S
Sbjct: 174 QHITNDKSIADCVEALIGAYLISCGTRGALLFMS 207
>gi|188593372|emb|CAP07635.1| drosha protein [Oikopleura dioica]
Length = 1096
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 152/348 (43%), Gaps = 67/348 (19%)
Query: 979 IKVLEAITTKKCQED--FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
IKV+ + T + +E +LE E LGD+ L + S +F + N EG LS+ + ++
Sbjct: 608 IKVMALLGTSEPKESPINYLERPEFLGDAVLGFVVSVSIFHLFPNLGEGALSMLRCALVC 667
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L L + L + ++I D + +LN+
Sbjct: 668 NVHLAALAQKLTLEDYF--------VYIHSQDLAKREDLNN------------------- 700
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRI--------GIKVDFVNVPYQRQF------Q 1142
+A+ EA++GA GG L R+ + +DF P Q+++ Q
Sbjct: 701 -ALANCFEAVLGAIYMDGGLEPVRQLLARVLFDDKALQRVWLDFPAHPLQQEYPDGDRAQ 759
Query: 1143 VHAER-LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY-QRLEFLGDAVLDYL 1200
+ + + L LE LL F++ LL +ALT + +I + + QRLEFLGDA+ ++L
Sbjct: 760 IESSKVLKRCAELEELLGVKFKNIRLLAKALTLKNVKYNDITKGHNQRLEFLGDAICNFL 819
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
YL+ +P G+LT +R V AL + + GL K ++ R +++ D
Sbjct: 820 AAEYLFKHFPLHHEGHLTLLRCTMVGAPTQALVAQQIGLDKFVI-------SRQSLSHDK 872
Query: 1261 FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
GW+ K L D++ES GA+F+D G VF +
Sbjct: 873 ---------MGWKQ-----KILADLMESFIGALFIDRGIIAVDVFMKV 906
>gi|359416970|ref|ZP_09209211.1| Hef nuclease [Candidatus Haloredivivus sp. G17]
gi|358032669|gb|EHK01333.1| Hef nuclease [Candidatus Haloredivivus sp. G17]
Length = 708
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 219/535 (40%), Gaps = 100/535 (18%)
Query: 22 ARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
+R YQ +++K+NT++ L TG GKT+IA M+ +K +FL P LV
Sbjct: 11 SRAYQEVIAASSMKRNTMIVLPTGLGKTVIAAMIA------AKKLESGKVLFLAPTKPLV 64
Query: 82 PQQAEAI-------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
Q ++ K ++ G+ D + W + +V TPQ++ + L
Sbjct: 65 EQHKKSFQEFIEIDKDQMEVMTGEIRPDDRYEIW---------KEKKVFFATPQVVENDL 115
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ + I DECH A G++ Y I + L G+TASP
Sbjct: 116 IAGEVPVRDFSLTIFDECHRATGEYSYVFISEKI-----------LSHKIGLTASP---- 160
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLS-------NFIP------FSTAKFKFYK 241
+++ ++ D + N +V T V N+I F TA+ K
Sbjct: 161 --GGDKEKIMEVADNLEMENFEVRTEDDPDVEPYIQDKEVNWIKVPLNNRFETARKKLED 218
Query: 242 YDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKIN-----STLLYCL 296
P + EL +E + ++ DL + Q+E IR K+S + S + +
Sbjct: 219 AKRKPLS-------ELKDMEYISSVNINKTDLLKLQSE-IRSKLSTSDDPKHYSAISHAA 270
Query: 297 SELGVWLALKAAET---ISCYESDFFAWEQLDG-FGETIIKKFGSDASQALVTYVPSGAE 352
S L + A++ ET CY S E D G+ + +++LV Y+ E
Sbjct: 271 SALKISQAIELLETQGVSQCY-SYMRGLENDDSKAGKKALNDEDFRKAKSLVEYLKKKGE 329
Query: 353 WSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLP 412
+ K EK+V L++ D R I+F E +A ++ EL
Sbjct: 330 ----EHPKL--------EKVVELLDGF-------DGRAIVFTEYRASA---DKIVEELEA 367
Query: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
H K G++ Q Q Q E +E+F G +V+V+TSI EEGLDV S + VI
Sbjct: 368 SHDPVKFVGQQGDDGMTQTQ----QIETLEQFGDGEYDVLVSTSIGEEGLDVPSVDKVIF 423
Query: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLS 527
++P + IQ GR S + ++ + D +R E Y S + +K + S
Sbjct: 424 YEPVSSSVRDIQRMGRTGRHESGEVSVLIAED----TRDEGYYWSAHHEKKRMNS 474
>gi|313224789|emb|CBY20581.1| unnamed protein product [Oikopleura dioica]
Length = 538
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 152/348 (43%), Gaps = 67/348 (19%)
Query: 979 IKVLEAITTKKCQED--FHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
IKV+ + T + +E +LE E LGD+ L + S +F + N EG LS+ + ++
Sbjct: 50 IKVMALLGTSEPKESPINYLERPEFLGDAVLGFVVSVSIFHLFPNLGEGALSMLRCALVC 109
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L L + L + ++I D + +LN+
Sbjct: 110 NVHLAALAQKLTLEDYF--------VYIHSQDLAKREDLNN------------------- 142
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRI--------GIKVDFVNVPYQRQF------Q 1142
+A+ EA++GA GG L R+ + +DF P Q+++ Q
Sbjct: 143 -ALANCFEAVLGAIYMDGGLEPVRQLLARVLFDDKALQRVWLDFPAHPLQQEYPDGDRAQ 201
Query: 1143 VHAER-LVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY-QRLEFLGDAVLDYL 1200
+ + + L LE LL F++ LL +ALT + +I + + QRLEFLGDA+ ++L
Sbjct: 202 IESSKVLKRCAELEELLGVKFKNIRLLAKALTLKNVKYNDITKGHNQRLEFLGDAICNFL 261
Query: 1201 ITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDS 1260
YL+ +P G+LT +R V AL + + GL K ++ R +++ D
Sbjct: 262 AAEYLFKHFPLHHEGHLTLLRCTMVGAPTQALVAQQIGLDKFVI-------SRQSLSHDK 314
Query: 1261 FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSI 1308
GW+ K L D++ES GA+F+D G VF +
Sbjct: 315 ---------MGWKQ-----KILADLMESFIGALFIDRGIIAVDVFMKV 348
>gi|195996179|ref|XP_002107958.1| hypothetical protein TRIADDRAFT_17843 [Trichoplax adhaerens]
gi|190588734|gb|EDV28756.1| hypothetical protein TRIADDRAFT_17843, partial [Trichoplax
adhaerens]
Length = 105
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 113 WKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRL 172
WKEE+ H+VLVMT ILL L+ Y K++ I +LI DECH A G+H YA IM ++ H
Sbjct: 2 WKEELESHQVLVMTAAILLQILQHGYIKVSHINLLIFDECHQAVGRHVYAQIMRDYVH-- 59
Query: 173 LETGDS-NLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYT 219
T D+ P IFG+TAS I K S+ + KI LE+LM S+V T
Sbjct: 60 --TEDAIRRPIIFGLTASVIHGKCKESQIEL--KIKQLESLMLSRVAT 103
>gi|260809268|ref|XP_002599428.1| hypothetical protein BRAFLDRAFT_249510 [Branchiostoma floridae]
gi|229284706|gb|EEN55440.1| hypothetical protein BRAFLDRAFT_249510 [Branchiostoma floridae]
Length = 613
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 10/194 (5%)
Query: 1 MEPVSMESDTTEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSY 59
M P+ E+ +P R YQ+E E AL+ +NTI+ TGSGKT +AI + R +
Sbjct: 1 MTPLQAAKPPPEQSELKDIPM-RGYQMELAEPALEGRNTIICAPTGSGKTRVAIKITRDH 59
Query: 60 AYLLRK-PSPFVAVFLVPKVVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEE 116
+ + VFLV K+ LV QQ A + + K + G+ D G T
Sbjct: 60 LEVGAGVEARRRVVFLVNKMPLVEQQCNAFREYLSPKYDILPLSGETTADIPVGET---- 115
Query: 117 MSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
+ ++V+++T Q+L + LR L+ +LI DECHH + Y IMT + + +E
Sbjct: 116 LPDYDVIILTAQVLENALRDELITLDTFSMLIFDECHHCQKNDPYNAIMTRYIKQKVERK 175
Query: 177 DS-NLPRIFGMTAS 189
S +LP+I G+TAS
Sbjct: 176 SSISLPQIIGLTAS 189
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 379 LLEYRGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQ 437
L Y D RC++F + R +T +L + + R AG + ++ +Q
Sbjct: 385 LQAYEEKPDSRCLLFCKTRALTIALLTWMQEDQALRKLNPGRLVGAGASESTGGMTQNQQ 444
Query: 438 NEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
E++E F G ++++TS+ EEG+D+ CN V +D +Q+RGR R + S +
Sbjct: 445 VELLELFTTGGHKIVISTSVAEEGIDIAKCNFVFRYDYVGNEIGKVQTRGRGRAEGSKSV 504
Query: 498 LMV-KSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGEDF 545
L+ + G + + +L N +R++++ A L + + EDF
Sbjct: 505 LIAGREGGNVLKEKL-------NTIREKLMEKAMLQVWHMQREKH-EDF 545
>gi|403361874|gb|EJY80651.1| Dicer-2 protein [Oxytricha trifallax]
Length = 1140
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 51/258 (19%)
Query: 1099 VADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVP----------YQRQFQVHAERL 1148
+ D + L F ENV F D + ++ + + V Y + + + L
Sbjct: 799 IQDQSKDLFNKFFMVEKENVPSNFKDMLQLRFETLEVDELGSAYDLCRYLKGEYLIKKAL 858
Query: 1149 VNVRHL-ESLLNYSFRDPSLLVEALTHGSYMLP-EIPRCYQRLEFLGDAVLDYL-----I 1201
V + L E++LNY F++P LL+EALTH S EI CY++LE LGD++LDYL I
Sbjct: 859 VLLEDLQENVLNYKFKNPLLLIEALTHKSAKDQLEINLCYEKLEVLGDSILDYLCNYSLI 918
Query: 1202 TVYLYNKY-----------PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
++ +Y +P +S V N+ A +V G+HK+I +
Sbjct: 919 YYTMFERYIEKDPVQYQIEEHFTPSDAHQSKSLLVKNELLAKITVLLGIHKYIFYQD--- 975
Query: 1251 YKRINITVDSFEKLSLGSTFGWESVTSF------------PKALGDIIESLAGAIFVDSG 1298
T+ F+K + + +F PK LGD+ ESL GAIF+D G
Sbjct: 976 ------TLGLFDKKEVSDYLKYSFRPNFRLNQREVELFECPKLLGDVFESLMGAIFIDGG 1029
Query: 1299 CNREVVFQSIRPLLEPMI 1316
N V Q R L+ P +
Sbjct: 1030 MN--AVIQVFRNLVGPFV 1045
>gi|328865213|gb|EGG13599.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 760
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELL---PRHCTWKTKYIAGNNSGIQC-QSRKKQNEIV 441
+ R I+FV+ +A L +L+ + R+ K + G+ S S KQ E+V
Sbjct: 518 DQFRAILFVKTRDSAHQLGEILNNISNKSTRYSFTKCVTVVGHGSNTDGGMSTSKQKEVV 577
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
E FR G NV+V T++LEEGLDV CNLVI D TV + IQSRGRAR +NS+++ ++K
Sbjct: 578 EAFRTGKANVVVTTNVLEEGLDVPECNLVIRIDAPSTVTALIQSRGRARHRNSEFVAIIK 637
Query: 502 S 502
+
Sbjct: 638 T 638
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 23/167 (13%)
Query: 75 VPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL 134
+ ++ LV QQ + IK T L V GD D SKH+VLV+ + ++ +
Sbjct: 193 IERIPLVTQQTKVIKDETGLDVIGLHGDSNSTILD--------SKHDVLVIIGALFINLI 244
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSK 194
+ + L+ ++++DE HH H +A ++ E+Y +L G S PRI G+TASP
Sbjct: 245 QKDHLNLSDYCIIVVDEAHHIVKDHPFAVLLREYYTKL---GKSLQPRIMGLTASP---- 297
Query: 195 VSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYK 241
+ + D++ TL++ KV + S+ + +P S + K ++
Sbjct: 298 --AGKADFFS------TLLSLKVMSRVSQCRIVTPLPHSVQEIKKHQ 336
>gi|15835187|ref|NP_296946.1| ribonuclease III [Chlamydia muridarum Nigg]
gi|270285359|ref|ZP_06194753.1| ribonuclease III [Chlamydia muridarum Nigg]
gi|270289375|ref|ZP_06195677.1| ribonuclease III [Chlamydia muridarum Weiss]
gi|301336756|ref|ZP_07224958.1| ribonuclease III [Chlamydia muridarum MopnTet14]
gi|13878715|sp|Q9PK97.1|RNC_CHLMU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|7190609|gb|AAF39406.1| ribonuclease III [Chlamydia muridarum Nigg]
Length = 232
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 32/250 (12%)
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITV 1203
+R VN++ +ES L ++F P LLV ALTH SY P +RLEFLGDAVL ++T
Sbjct: 2 QRTVNIQAVESKLKFTFSQPRLLVTALTHPSYRNEFPSDGEDSERLEFLGDAVLGLVVTE 61
Query: 1204 YLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEK 1263
+L+ +P L+ G L+ RSA VN + + K L +H+L + EK
Sbjct: 62 HLFLLFPSLNEGLLSTTRSALVNAEACFNYTQKLSLGEHLL-------------IGRGEK 108
Query: 1264 LSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLL--EPMITPETM 1321
+ +S A ++ E++ GA+++D G Q I PLL + I P M
Sbjct: 109 M--------QSHRGKISAYANLFEAILGAVYLDGGL--APARQIIVPLLPNKEAILP-LM 157
Query: 1322 RFHPVRELTEYCQKNHFSMKKPVA---SRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
+P L ++ Q+ + +A S G V+V N +L+ F KK A+
Sbjct: 158 LVNPKNRLQQFTQQTLKVLPTYIALPWSSEDGTPGYHVQVFVNEKLWGEGF-AGSKKEAE 216
Query: 1379 KVACKEVLKS 1388
K+A K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|405958476|gb|EKC24603.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 1198
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R+YQ+E + AL+ +N I+ TGSGKT +A+ +++++ R+ + FLV + L
Sbjct: 505 RSYQMELAQAALQDKNCIIVAPTGSGKTHVAMKIIQNHREKRRRLNIPKVAFLVEQSALA 564
Query: 82 PQQAEAIKMHTDLKVGKYWGD--MGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ + K + KV G+ + W + K +VLV+T QIL++ L
Sbjct: 565 EQQGKVCKEYLGCKVKVITGEKQRTESLQSLSCW---IQKKDVLVITAQILVNALATGDI 621
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
++ +++ DECHH+ KH Y IM + LE LP+I G+TAS K + E
Sbjct: 622 QIEAFSLIVFDECHHSHAKHPYNQIMAYYLDLKLEDKHKQLPQIVGLTASVGVGKAKNEE 681
Query: 200 Q 200
+
Sbjct: 682 K 682
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 387 DIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFR 445
D R IIFV R + + + ++ RH A S ++ +Q + + F+
Sbjct: 885 DSRGIIFVRTRDLVKAIHRWMMETDDLRHLKPVMFTGAQAKSSAGGMTKVQQIDALSLFK 944
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
G +++ATS+ EEGLD+Q CNLVI + + +Q+RGR R +N Y ++ + GD
Sbjct: 945 EGRHKIVIATSVAEEGLDIQKCNLVIRYSYVSNEIAMVQARGRGRRENGKYFVVAEQGDK 1004
Query: 506 TTQ 508
T +
Sbjct: 1005 TAE 1007
>gi|379055833|emb|CCD32420.1| dicer-1b, partial [Acyrthosiphon svalbardicum]
gi|379055835|emb|CCD32421.1| dicer-1b, partial [Acyrthosiphon kondoi]
Length = 272
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 20/213 (9%)
Query: 977 PTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIIS 1036
P+I +L+A+TT + +LE LET+GDSFLKYA + L+ T+ N HEG+LS + +S
Sbjct: 64 PSI-LLQALTTSNANDGINLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVS 122
Query: 1037 NAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKS 1096
N L +LG + + + F+P+ +P ++L + ++ N I +T + +
Sbjct: 123 NLNLYRLGKLKMFGERMISTKFEPRSNWLPPCFIEPHKL-EKAVINSN-ISIT-QHIIND 179
Query: 1097 KTVADVVEALIGAFLSTGGENVGLIFLDRIGIKV----DFVNVPYQRQFQVHAERLVN-- 1150
K++AD VEALIGA+L + G L+F+ +GI+V D + Y + +N
Sbjct: 180 KSIADCVEALIGAYLISCGNRGALLFMSWLGIRVLNTLDDSKLGYLKPPSSSILHNINDS 239
Query: 1151 ----------VRHLESLLNYSFRDPSLLVEALT 1173
E L Y F+D S L++A+T
Sbjct: 240 EGELTKLMDGFESFEQHLGYCFQDRSYLLQAMT 272
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 1165 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSAS 1224
PS+L++ALT + +RLE +GD+ L Y +T YLY + + G L+D+RS
Sbjct: 64 PSILLQALTTSN---ANDGINLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNH 120
Query: 1225 VNN-DCYALSSVKHGLHKHILHASHELYKRIN------ITVDSFEKLSLGSTFGWESVTS 1277
V+N + Y L +K + I S + R N I EK + S
Sbjct: 121 VSNLNLYRLGKLKMFGERMI---STKFEPRSNWLPPCFIEPHKLEKAVINSNISITQHII 177
Query: 1278 FPKALGDIIESLAGAIFVDSGCNREVVFQS 1307
K++ D +E+L GA + G ++F S
Sbjct: 178 NDKSIADCVEALIGAYLISCGNRGALLFMS 207
>gi|330798142|ref|XP_003287114.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
gi|325082892|gb|EGC36360.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
Length = 2341
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 19/213 (8%)
Query: 18 TLPFARN------YQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRK-----P 66
T+P +N YQ+E+ + QNT++ L TG GKTLI+IM L + L
Sbjct: 251 TVPTLKNNIEPNSYQVESFYHICAQNTLLILPTGMGKTLISIMGLMEFHRLNNSQEDTGD 310
Query: 67 SPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMT 126
S V +FLV +V LV QQA+AI+ +++LK K +G++ + ++E ++VLV T
Sbjct: 311 SKRVCLFLVDRVPLVAQQAKAIEEYSNLKTIKLYGEINKEDLRSKIKEKE---YDVLVST 367
Query: 127 PQILLDGLRLSYFKLNMIKVLILDECHHA-RGKHQYACIMTEFYHRLLETGDSNLPRIFG 185
+ L Y K+ ++ DE HHA G H + + ++T PRI G
Sbjct: 368 VGSFVSLLESKYVKIEEFYFIVFDEVHHAGGGSHPFNQTINFIKKSDIKT----WPRILG 423
Query: 186 MTASPIKSKVSSSEQDYWQKIHDLETLMNSKVY 218
+TAS I ++ E KI +E LM SK++
Sbjct: 424 LTASLINIGNNTDEVIVSNKIKTIEDLMLSKIF 456
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 379 LLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHC---TWKTKYIAGNNSGIQCQSRK 435
L V I+ I+FVE A + L+ELL + K + G SG S
Sbjct: 620 FLTQNDVSSIKIIVFVESRAGA----ARLTELLKKEAFNDILNCKLLVGQ-SGDDGMSSH 674
Query: 436 KQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
KQ +I+++FR G +IV+T++LEEG+D++ CN+VI +D ++ S +Q RGRAR +NS
Sbjct: 675 KQQKIIKKFRDGKCKLIVSTNVLEEGIDIKECNMVICYDSVLSLKSLVQRRGRARSENSQ 734
Query: 496 YLLM 499
++++
Sbjct: 735 FIVI 738
>gi|26343661|dbj|BAC35487.1| unnamed protein product [Mus musculus]
Length = 651
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 217/528 (41%), Gaps = 84/528 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R+YQL+ +AL NT+V L TG GKT IA +++ Y + PS V VF+ P LV
Sbjct: 80 RDYQLDISRSALFCNTLVCLPTGLGKTFIAAVVM--YNFYRWFPSGKV-VFMAPTKPLVT 136
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQ EA H + +M KE S VL +TPQ++++ L
Sbjct: 137 QQMEAC-FHVMGIPQSHMAEM-TGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPAT 194
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDY 202
+K L++DE H A G + Y ++ E RI ++A+P S + + +Q
Sbjct: 195 HVKCLVVDEAHKALGNYAYCQVVRELVKYTTHF------RILALSATP-GSDIKAVQQ-- 245
Query: 203 WQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIEL 262
+ L+ K+ + ES + +P+S ++ L L +EL I+
Sbjct: 246 -----VITNLLIGKIELRSEES--PDILPYS--------HERRVEKLVVPLGEELGAIQK 290
Query: 263 KHTRSLENL----------------DLNEAQAELIRKKVSK-------------INSTLL 293
+ + LE +L + Q L R + K I
Sbjct: 291 TYIQILETFASSLIHRNVLMKRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGEFA 350
Query: 294 YCLSELGVWLALKAAETISCYESDFFAWEQLDGF-GETIIKKFGS--DASQALVTYVPSG 350
C+S + L+ S Y FF +DG G T + S + L T++ S
Sbjct: 351 LCISLYHGYELLQQMGMRSLY---FFLSGIMDGTKGMTRARNELSRNEDFMKLYTHLQSA 407
Query: 351 -AEWSIGDDSKF---NLDSGLLTE--KIVCLIESLLEY------RGVEDIRCIIFVERVI 398
A S D S F N + + K+ L E +LE+ + + +C RV+
Sbjct: 408 FAPASTSDASAFQRGNKEKKFVYSHPKLKKLEEVILEHFKSWNAKATTEKKC--HESRVM 465
Query: 399 TAIVLQSLLSE----LLPRHCTWKTKYIAGNNSGIQCQ--SRKKQNEIVEEFRRGLVNVI 452
+ + E LL + G+ SG + ++K+Q ++V +FR G N +
Sbjct: 466 IFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHASGKNTKGFTQKEQLQVVRQFRDGGYNTL 525
Query: 453 VATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
V+T + EEGLD+ +L+I FD ++ IQ GR + ++++
Sbjct: 526 VSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQRMGRTGRKRQGRIVVI 573
>gi|166155383|ref|YP_001653638.1| ribonuclease III [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|238687467|sp|B0BBS8.1|RNC_CHLTB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|165931371|emb|CAP06943.1| ribonuclease III [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|440526098|emb|CCP51582.1| ribonuclease III [Chlamydia trachomatis L2b/8200/07]
gi|440535923|emb|CCP61436.1| ribonuclease III [Chlamydia trachomatis L2b/795]
gi|440542151|emb|CCP67665.1| ribonuclease III [Chlamydia trachomatis L2b/UCH-2]
gi|440543042|emb|CCP68556.1| ribonuclease III [Chlamydia trachomatis L2b/Canada2]
gi|440543933|emb|CCP69447.1| ribonuclease III [Chlamydia trachomatis L2b/LST]
gi|440544823|emb|CCP70337.1| ribonuclease III [Chlamydia trachomatis L2b/Ams1]
gi|440545713|emb|CCP71227.1| ribonuclease III [Chlamydia trachomatis L2b/CV204]
gi|440913975|emb|CCP90392.1| ribonuclease III [Chlamydia trachomatis L2b/Ams2]
gi|440914865|emb|CCP91282.1| ribonuclease III [Chlamydia trachomatis L2b/Ams3]
gi|440915757|emb|CCP92174.1| ribonuclease III [Chlamydia trachomatis L2b/Canada1]
gi|440916651|emb|CCP93068.1| ribonuclease III [Chlamydia trachomatis L2b/Ams4]
gi|440917541|emb|CCP93958.1| ribonuclease III [Chlamydia trachomatis L2b/Ams5]
Length = 231
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 38/250 (15%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHSSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
+P L+ G L+ R+A VN + + K L +H+L + EK+
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN--REVVF------QSIRPLLEPMITP 1318
+S A ++ E++ GA+++D G + R+++ +SI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
+ +++ T+ K S K G V+V NG L+ F KK A+
Sbjct: 162 KNR----LQQFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGF-AGSKKEAE 216
Query: 1379 KVACKEVLKS 1388
K+A K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|348680026|gb|EGZ19842.1| hypothetical protein PHYSODRAFT_558487 [Phytophthora sojae]
Length = 2706
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ+E +AL +NTIV+L TG GKTL+AI ++ +L P V VF VP LV
Sbjct: 222 RRYQVELTLSALLENTIVYLPTGCGKTLVAIKVMEEMKHL--NPDKLV-VFFVPTGPLVS 278
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA I+ ++ +V ++ G G + + + +V+TPQ L+ L +
Sbjct: 279 QQAAYIRRESNFQVAEFSGQHGRTTAATSAPIKVDGGFDAVVVTPQYFLNLLFNGRTSIT 338
Query: 143 MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL-PRIFGMTASPIKSKV-SSSEQ 200
++ DE HHA G H Y ++ L T D + P I +TASP V +S
Sbjct: 339 DYSTMVFDEAHHATGNHPYCELLKN-----LATVDLRVRPHILALTASPFGEGVREASGP 393
Query: 201 DYWQKIHD-LETLMNSKVYTCASESVLSNFIP 231
+K+ D ++N+ T A++ + ++FIP
Sbjct: 394 TALRKLADAYNAVVNAP--TIAADDLEASFIP 423
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRR 446
D R I+FV R TAIVL + L T+++ G+NS ++Q ++ FR+
Sbjct: 612 DSRAIVFVRRRKTAIVLAKAMESLEVLRELNPTRFV-GHNSYEGMSWEEEQRPTLDRFRQ 670
Query: 447 GLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKS-GDS 505
G + ++VAT++LEEGLDV C+LVI FD V S IQSRGRAR ++S +++ + G
Sbjct: 671 GRIRLLVATNVLEEGLDVPECSLVIQFDGVVGVTSLIQSRGRARHRDSSFIIFCSAVGKE 730
Query: 506 TTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHM 540
Q +EN K ++S A++ S L + +
Sbjct: 731 RNQRLVEN--------EKRLVSLANMAASRLKSKV 757
>gi|15605018|ref|NP_219802.1| ribonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76789019|ref|YP_328105.1| ribonuclease III [Chlamydia trachomatis A/HAR-13]
gi|237802720|ref|YP_002887914.1| ribonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|237804642|ref|YP_002888796.1| ribonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311099|ref|ZP_05353669.1| ribonuclease III [Chlamydia trachomatis 6276]
gi|255317400|ref|ZP_05358646.1| ribonuclease III [Chlamydia trachomatis 6276s]
gi|376282301|ref|YP_005156127.1| ribonuclease III [Chlamydia trachomatis A2497]
gi|385239809|ref|YP_005807651.1| ribonuclease III [Chlamydia trachomatis G/9768]
gi|385240731|ref|YP_005808572.1| ribonuclease III [Chlamydia trachomatis G/11222]
gi|385242585|ref|YP_005810424.1| ribonuclease III [Chlamydia trachomatis G/9301]
gi|385243503|ref|YP_005811349.1| Ribonuclease III [Chlamydia trachomatis D-EC]
gi|385244383|ref|YP_005812227.1| Ribonuclease III [Chlamydia trachomatis D-LC]
gi|385246195|ref|YP_005815017.1| ribonuclease III [Chlamydia trachomatis G/11074]
gi|385269975|ref|YP_005813135.1| Ribonuclease III [Chlamydia trachomatis A2497]
gi|7531193|sp|O84299.1|RNC_CHLTR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|90101618|sp|Q3KM65.1|RNC_CHLTA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|3328712|gb|AAC67890.1| Ribonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76167549|gb|AAX50557.1| ribonuclease III [Chlamydia trachomatis A/HAR-13]
gi|231272942|emb|CAX09853.1| ribonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273954|emb|CAX10746.1| ribonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|296435814|gb|ADH17988.1| ribonuclease III [Chlamydia trachomatis G/9768]
gi|296436739|gb|ADH18909.1| ribonuclease III [Chlamydia trachomatis G/11222]
gi|296437674|gb|ADH19835.1| ribonuclease III [Chlamydia trachomatis G/11074]
gi|297140173|gb|ADH96931.1| ribonuclease III [Chlamydia trachomatis G/9301]
gi|297748426|gb|ADI50972.1| Ribonuclease III [Chlamydia trachomatis D-EC]
gi|297749306|gb|ADI51984.1| Ribonuclease III [Chlamydia trachomatis D-LC]
gi|347975115|gb|AEP35136.1| Ribonuclease III [Chlamydia trachomatis A2497]
gi|371908331|emb|CAX08959.1| ribonuclease III [Chlamydia trachomatis A2497]
gi|438690220|emb|CCP49477.1| ribonuclease III [Chlamydia trachomatis A/7249]
gi|438691304|emb|CCP48578.1| ribonuclease III [Chlamydia trachomatis A/5291]
gi|438692677|emb|CCP47679.1| ribonuclease III [Chlamydia trachomatis A/363]
gi|440525210|emb|CCP50461.1| ribonuclease III [Chlamydia trachomatis K/SotonK1]
gi|440527886|emb|CCP53370.1| ribonuclease III [Chlamydia trachomatis D/SotonD5]
gi|440528777|emb|CCP54261.1| ribonuclease III [Chlamydia trachomatis D/SotonD6]
gi|440532350|emb|CCP57860.1| ribonuclease III [Chlamydia trachomatis G/SotonG1]
gi|440533244|emb|CCP58754.1| ribonuclease III [Chlamydia trachomatis Ia/SotonIa1]
gi|440534138|emb|CCP59648.1| ribonuclease III [Chlamydia trachomatis Ia/SotonIa3]
Length = 231
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 38/250 (15%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
+P L+ G L+ R+A VN + + K L +H+L + EK+
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN--REVVF------QSIRPLLEPMITP 1318
+S A +++E++ GA+++D G + R+++ +SI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLLEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
+ +++ T+ K S K G V+V NG L+ F KK A+
Sbjct: 162 KNR----LQQFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGF-AGSKKEAE 216
Query: 1379 KVACKEVLKS 1388
K+A K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|255506876|ref|ZP_05382515.1| ribonuclease III [Chlamydia trachomatis D(s)2923]
gi|389857987|ref|YP_006360229.1| ribonuclease III [Chlamydia trachomatis F/SW4]
gi|389859739|ref|YP_006361979.1| ribonuclease III [Chlamydia trachomatis F/SW5]
gi|380249059|emb|CCE14350.1| ribonuclease III [Chlamydia trachomatis F/SW5]
gi|380249934|emb|CCE13461.1| ribonuclease III [Chlamydia trachomatis F/SW4]
gi|440526994|emb|CCP52478.1| ribonuclease III [Chlamydia trachomatis D/SotonD1]
gi|440531458|emb|CCP56968.1| ribonuclease III [Chlamydia trachomatis F/SotonF3]
Length = 231
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 38/250 (15%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPKLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
+P L+ G L+ R+A VN + + K L +H+L + EK+
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN--REVVF------QSIRPLLEPMITP 1318
+S A ++ E++ GA+++D G + R+++ +SI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
+ +++ T+ K S K G V+V NG L+ F KK A+
Sbjct: 162 KNR----LQQFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGF-AGSKKEAE 216
Query: 1379 KVACKEVLKS 1388
K+A K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|393226114|gb|EJD33934.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 574
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 211/507 (41%), Gaps = 82/507 (16%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQ ++ AL +NT+V L TG GKT IA +++ +Y P+ + +FL P LV
Sbjct: 22 RTYQFSIVQAALLKNTLVALPTGLGKTFIAGVVMLNYWRWF--PTGKI-IFLCPTKPLVA 78
Query: 83 QQ------------AEAIKMHTD-LKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQI 129
QQ ++A +MH + LKV + W+ + V MTPQ
Sbjct: 79 QQIVACHNTCGIPGSDATEMHGEILKVKR------AHLWE---------QKRVFYMTPQT 123
Query: 130 LLDGLRLSYFKLN--MIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMT 187
L + L L ++ V++ DE H A G H Y + + T + RI +T
Sbjct: 124 LKNDLTAEIMDLRDIVLMVIVPDEAHKATGAHAYTTTVRDI------TEKNPACRILALT 177
Query: 188 ASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTAKFKFYKYDEIPH 247
A+P SS++D Q I D + + ++ +E+ L + P+ K K P
Sbjct: 178 ATP------SSDKDKIQPIIDALRIGHIEIR---NETSL-DISPYIKRKEKREIVIRFPP 227
Query: 248 ALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKA 307
L + L D LA I L + L N ++ + L + + I S L ++ G A
Sbjct: 228 HLAS-LRDSLANIMLSMLKLLRNGEIPGSLDPLHVRPFT-IQSALGNMKNQPGS--AAWT 283
Query: 308 AETISCYESDFFAWEQLDGFGETIIKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGL 367
++ S A +L+GFG + L Y + + D G
Sbjct: 284 CRILNDLHSLATAMNRLEGFG-------AYKHQRTLPAYTKTPDYKKLLQDFTNEKKRGT 336
Query: 368 LTE-KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNN 426
L K+ L E LL+Y G ++ I + L+S + E++ +Y+ G
Sbjct: 337 LVHPKMQKLRELLLDYFGAPVAGSSSATQKAIVFVSLRSCVDEIV--------EYLTGEE 388
Query: 427 SGIQCQSRKKQN-------------EIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMF 473
I+ Q +++++F+ VNV+++TSI EEGLD+ +L+I +
Sbjct: 389 PTIRPARFVGQGTDNKGGKGILISQQLIQQFQSSNVNVLISTSIGEEGLDIGEVDLIICY 448
Query: 474 DPSRTVCSFIQSRGRARMQNSDYLLMV 500
+ + +Q GR Q L+++
Sbjct: 449 ETPSSPIRGLQRAGRTGRQRDGQLILL 475
>gi|166154508|ref|YP_001654626.1| ribonuclease III [Chlamydia trachomatis 434/Bu]
gi|255348658|ref|ZP_05380665.1| ribonuclease III [Chlamydia trachomatis 70]
gi|255503198|ref|ZP_05381588.1| ribonuclease III [Chlamydia trachomatis 70s]
gi|301335768|ref|ZP_07224012.1| ribonuclease III [Chlamydia trachomatis L2tet1]
gi|339625959|ref|YP_004717438.1| ribonuclease III [Chlamydia trachomatis L2c]
gi|385241664|ref|YP_005809504.1| ribonuclease III [Chlamydia trachomatis E/11023]
gi|385245271|ref|YP_005814094.1| ribonuclease III [Chlamydia trachomatis E/150]
gi|386262648|ref|YP_005815927.1| ribonuclease III [Chlamydia trachomatis Sweden2]
gi|389858863|ref|YP_006361104.1| ribonuclease III [Chlamydia trachomatis E/SW3]
gi|238687367|sp|B0B7L3.1|RNC_CHLT2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|165930496|emb|CAP03989.1| ribonuclease III [Chlamydia trachomatis 434/Bu]
gi|289525336|emb|CBJ14812.1| ribonuclease III [Chlamydia trachomatis Sweden2]
gi|296434887|gb|ADH17065.1| ribonuclease III [Chlamydia trachomatis E/150]
gi|296438607|gb|ADH20760.1| ribonuclease III [Chlamydia trachomatis E/11023]
gi|339460721|gb|AEJ77224.1| ribonuclease III [Chlamydia trachomatis L2c]
gi|380250812|emb|CCE12572.1| ribonuclease III [Chlamydia trachomatis E/SW3]
gi|440529667|emb|CCP55151.1| ribonuclease III [Chlamydia trachomatis E/SotonE4]
gi|440530566|emb|CCP56050.1| ribonuclease III [Chlamydia trachomatis E/SotonE8]
gi|440535033|emb|CCP60543.1| ribonuclease III [Chlamydia trachomatis E/Bour]
gi|440536814|emb|CCP62328.1| ribonuclease III [Chlamydia trachomatis L1/440/LN]
gi|440537705|emb|CCP63219.1| ribonuclease III [Chlamydia trachomatis L1/1322/p2]
gi|440538595|emb|CCP64109.1| ribonuclease III [Chlamydia trachomatis L1/115]
gi|440539483|emb|CCP64997.1| ribonuclease III [Chlamydia trachomatis L1/224]
gi|440540374|emb|CCP65888.1| ribonuclease III [Chlamydia trachomatis L2/25667R]
gi|440541263|emb|CCP66777.1| ribonuclease III [Chlamydia trachomatis L3/404/LN]
Length = 231
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 38/250 (15%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
V+++ +ES LN++F P LL+ ALTH SY P +RLEFLGDAVL ++T +L+
Sbjct: 5 VDIQAIESKLNFTFSHPRLLITALTHPSYRNEFPSAEEDSERLEFLGDAVLGLVVTEHLF 64
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
+P L+ G L+ R+A VN + + K L +H+L + EK+
Sbjct: 65 LLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL-------------IGRGEKM-- 109
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCN--REVVF------QSIRPLLEPMITP 1318
+S A ++ E++ GA+++D G + R+++ +SI PL+ ++ P
Sbjct: 110 ------QSHRGKISAYANLFEAILGAVYLDGGLSPARQIIVPLLPDKESILPLM--LVNP 161
Query: 1319 ETMRFHPVRELTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAK 1378
+ +++ T+ K S K G V+V NG L+ F KK A+
Sbjct: 162 KNR----LQQFTQQTLKVLPSYKALPWKSEDGSPGYHVQVFVNGDLWGEGF-AGSKKEAE 216
Query: 1379 KVACKEVLKS 1388
K+A K+ L +
Sbjct: 217 KLAAKQALST 226
>gi|298708664|emb|CBJ26151.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 765
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 31/192 (16%)
Query: 8 SDTTEEVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS 67
+ T E A TL R YQ L NTIV L TGSGKTL+A A ++++
Sbjct: 15 ATTAAEAPAKTL---RGYQSRIANKCLHDNTIVVLPTGSGKTLLA-------AEVIKRLG 64
Query: 68 PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTP 127
P A+FLVP +LV QQAEA+ T L V KY G G+ S ++LV TP
Sbjct: 65 P-PALFLVPTCLLVDQQAEALGSWTGLSVAKYRGGAGL----------PPSTFKILVSTP 113
Query: 128 QILLDGLR--LSYFKLNMIKVLILDECHHARGKHQYACI--------MTEFYHRLLETGD 177
Q + + + + + +V+I DE HH H Y + +T G
Sbjct: 114 QAFRTAQQNGIGHLQWSAFRVVIFDEVHHVLKDHPYRKLALSLRRSSLTPPPAAAAAAGP 173
Query: 178 SNLPRIFGMTAS 189
S+ PR+ G+TAS
Sbjct: 174 SSHPRVVGLTAS 185
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 388 IRCIIFV-ERVITAIVLQSLLSE--LLPR---HCTWKTKYIAGNNSGIQCQSRKKQNEIV 441
R I+FV +RV T ++ ++ ++ + PR C + + A + + ++ + +
Sbjct: 510 FRGIVFVVQRVTTHVLAHAIAADPRMAPRFSAACLYASSSPATASLSV---TKAQAQASI 566
Query: 442 EEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
E FR G VN+++AT + EEG+DV N V+ +D S +Q RGRAR ++S ++++ +
Sbjct: 567 EAFRSGSVNLLLATVVAEEGMDVPKANCVVRYDAMVHAVSMVQGRGRAREEDSSFVVLSE 626
Query: 502 SGDSTT 507
D TT
Sbjct: 627 RPDRTT 632
>gi|294934332|ref|XP_002781064.1| hypothetical protein Pmar_PMAR027514 [Perkinsus marinus ATCC 50983]
gi|239891297|gb|EER12859.1| hypothetical protein Pmar_PMAR027514 [Perkinsus marinus ATCC 50983]
Length = 580
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKP-----SPFVAVFLVP 76
R YQLE L + ++T+ F+ TGSGKTL+A+ LLR L ++ + V VF P
Sbjct: 4 RTYQLEVLAKIREFKSTVAFMPTGSGKTLVAVWLLRERIALQQRDVADGQAKKVCVFSAP 63
Query: 77 KVVLVPQQAEAIKMHTD----LKVGKYWGDMG-VDFWDGATWKEEMSKHEVLVMTPQILL 131
VL QQA+ I + ++ G+ +D W G WK+ ++ EV+V P+IL
Sbjct: 64 NKVLCHQQADYIGSNIGDDQRCRIRVLTGETPRIDNWCGTEWKDILASVEVIVCVPEILR 123
Query: 132 DGLRLSYFKLNMIKVLILDECHHARGK------HQYACIMTEFYHRLLETGDSNLPRIFG 185
L ++ N+I LI DECHH K H Y C + + + G
Sbjct: 124 RALACNFVDSNLIDTLIFDECHHCVSKKGVSSGHPY-CQLAQLAR--------GARKYVG 174
Query: 186 MTASPIKSKVSSSEQDYWQKIHDLETLMN 214
+TASPI K + D + + L+T+++
Sbjct: 175 LTASPINCK----KVDVKKNMQQLKTVLS 199
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 19/105 (18%)
Query: 391 IIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVN 450
I+FV + A ++L + L R+C + GN + KQ E +E F+
Sbjct: 464 IVFVGERLMA---RALAATLNLRYC------VGGNGERVS-----KQTEALEWFKDTAEE 509
Query: 451 -----VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRAR 490
V++ATS+ +EG+DV C+ V+M+D V SFIQ RGRAR
Sbjct: 510 GSQRAVLIATSVCDEGVDVPICDCVVMWDVPPNVRSFIQRRGRAR 554
>gi|410460645|ref|ZP_11314319.1| ribonuclease III [Bacillus azotoformans LMG 9581]
gi|409926699|gb|EKN63853.1| ribonuclease III [Bacillus azotoformans LMG 9581]
Length = 247
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 1138 QRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGD 1194
+R+ ++ ++ + + L+ LLN F + LLV+A TH SY+ + + RLEFLGD
Sbjct: 7 KREKKIGIKQKLKFQELQDLLNIQFENEHLLVQAFTHSSYVNEHRIKSSEDNERLEFLGD 66
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVL+ ++ YL+N YP +S G LT +R+A V C +++ +H+L
Sbjct: 67 AVLELTVSHYLFNNYPSMSEGDLTKLRAAIV---C----------EPSLVNFAHQLSFGE 113
Query: 1255 NITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF--QSIRPLL 1312
+ + E+L+ G + P L D+ ES GA+++D G ++ + F + I P +
Sbjct: 114 YVLLGKGEELTGGR--------ARPALLADVFESFIGALYLDQGLDKVIEFLQKVIYPKI 165
Query: 1313 EPMITPETMRFHPVRELTEYCQKNH--------FSMKKPVASRISGKAAVTVEVQANGRL 1364
+ M + +L E Q+N K P +R V NG +
Sbjct: 166 SEGVFSHVMDYKS--QLQEIVQRNGQGSLEYLIIQEKGPAHNR-----EFVSRVALNGEI 218
Query: 1365 FEHTFLDADKKTAKKVACKEVLKSLR 1390
T + KK A++ A KE L L+
Sbjct: 219 L-GTGVGKSKKEAEQKAAKEALDELK 243
>gi|319656775|gb|ADV58759.1| retinoic acid inducible protein I [Anser anser]
Length = 934
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +N ++ TGSGKT IA+++ + + VFL KV +
Sbjct: 246 ARSYQIELAQPAINGKNALICAPTGSGKTFIALLVCEHHFQNMPAGRKGKVVFLATKVPV 305
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF- 139
QQ K H + + G G +F + + + ++++V+TPQIL++
Sbjct: 306 YEQQKNVFKQHFERQGYSIQGVSGENF-SNVSVENVIEDNDIIVLTPQILVNSFEDGTLT 364
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + + S LP+I G+TAS
Sbjct: 365 SLSVFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSPASQLPQILGLTAS 414
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
+++ATS+ +EG+D+ CNLV++++ S V IQ RGR R S +L+ + +
Sbjct: 695 LLIATSVADEGIDIAQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENEK 754
Query: 511 LENY 514
Y
Sbjct: 755 CNRY 758
>gi|390331521|ref|XP_780548.3| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
[Strongylocentrotus purpuratus]
Length = 858
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 12/177 (6%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFV------AVFLV 75
R+YQ E L ALK QN +V L TG+GKT +AI L+ S +L R P +VF+V
Sbjct: 72 RDYQEEVLTPALKGQNAMVVLPTGTGKTEVAIALI-SRRFLARNPVGATNHRRQKSVFVV 130
Query: 76 PKVVLVPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLR 135
KV LV QQ + + K K G GV+ + + +++ V+T Q+L+D L+
Sbjct: 131 NKVPLVKQQKDRCLKYLRGKC-KVAGVSGVES-NRVPLNSVIDSNDITVLTAQVLVDALK 188
Query: 136 LSYFKLNM--IKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASP 190
KL + I +L++DECHH + + Y +M + L + + P+I G+TASP
Sbjct: 189 DDNIKLKLSDIALLVIDECHHCQKSNPYNVLMAMYRDLKLNSPELPRPQILGLTASP 245
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEI 440
EY ED IIF + A L L++ + T +I N G+ + +QN I
Sbjct: 440 EYAENEDSSSIIFTKTRALAKALVKWLNKDPDLNHTKAEIFIGSGNQGM---TSTEQNRI 496
Query: 441 VEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMV 500
++ FR ++VATS+ EEGLD+ +CN+V ++ + ++Q++GR R + + ++
Sbjct: 497 LQLFRDKKCRILVATSVAEEGLDITNCNMVFSYNYVTSDIGYVQTKGRIRADCNGKMFVI 556
Query: 501 KSGDSTTQS 509
+ D Q
Sbjct: 557 VNSDLQLQD 565
>gi|389815314|ref|ZP_10206660.1| ribonuclease 3 [Planococcus antarcticus DSM 14505]
gi|388466093|gb|EIM08402.1| ribonuclease 3 [Planococcus antarcticus DSM 14505]
Length = 251
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 37/200 (18%)
Query: 1137 YQRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLG 1193
YQ+Q V L+ LN SF P+LL +A TH SY+ + + +RLEFLG
Sbjct: 9 YQKQSVVKESAKAAFEQLQKELNVSFNKPALLYQAFTHSSYVNEHRRKQFTDNERLEFLG 68
Query: 1194 DAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKR 1253
DAVL+ ++ YLY KYP +S G LT +R+A V L + + G K+IL
Sbjct: 69 DAVLELSVSHYLYMKYPEMSEGELTKLRAAIVCEPSLVLFANELGFGKYIL--------- 119
Query: 1254 INITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLE 1313
+ E+L+ G T P L D+ ES GA+++D G LE
Sbjct: 120 ----LGKGEELTGGRT--------RPALLADVFESYIGALYLDQG-------------LE 154
Query: 1314 PMITPETMRFHPVRELTEYC 1333
P++T M P E+ +
Sbjct: 155 PVVTFLEMVLFPKVEIGAFS 174
>gi|321468043|gb|EFX79030.1| hypothetical protein DAPPUDRAFT_319984 [Daphnia pulex]
Length = 488
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
+ L ++ E++L+Y+ D +L+EA THG+ M + YQRLE +GDA L +L +
Sbjct: 79 DELNSLAKFENILHYTSNDKEVLLEAFTHGNSMKSQ---NYQRLELIGDAALGFLSALNF 135
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI----------LHASHELYKRIN 1255
+ K + G +T +RSA V ND + + + K+G H+H+ L+ E+ +R N
Sbjct: 136 FKKSLTHTSGDITKLRSACVCNDTFGVWAAKYGFHEHVQNLPPILLKQLNDFLEVVEREN 195
Query: 1256 ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
T FE+ + + + P L D+ E++ GAI +D+ + E +
Sbjct: 196 FTFAPFERELAANGQIMATQVAIPSFLADVFEAVEGAIIIDANLSFETL 244
>gi|308234556|ref|ZP_07665293.1| ribonuclease III [Atopobium vaginae DSM 15829]
gi|328944154|ref|ZP_08241619.1| ribonuclease III [Atopobium vaginae DSM 15829]
gi|327492123|gb|EGF23897.1| ribonuclease III [Atopobium vaginae DSM 15829]
Length = 233
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 30/193 (15%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLY 1206
++H E ++ Y+F + L+ A+TH S + LP + Y+RLEFLGD++L ++ ++
Sbjct: 5 ARIKHAEQIIEYTFENKRLIQAAITHPSAVEGLP-VSASYERLEFLGDSILGAIVATDMF 63
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
K+PG+ G LT M+ + V+ ++ + + G+ + I+
Sbjct: 64 EKFPGMDEGALTRMKISLVSGKTLSMVAEELGIGECII---------------------F 102
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
G + V F AL ++ ESL GA+++++G V F IR L P + PE + HP+
Sbjct: 103 GDSEKGTGVRGFTSALENVYESLVGALYLEAGYEPTVKF--IRRTLTPYMVPELAK-HPI 159
Query: 1327 ---RELTEYCQKN 1336
L E CQK
Sbjct: 160 SPKSRLQEVCQKR 172
>gi|326368642|gb|ADZ55452.1| retinoic acid-inducible protein I [Cyprinus carpio]
Length = 946
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 14/172 (8%)
Query: 25 YQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVPQ 83
YQ E A++ QNTI+ TG GKT++A+ + S +L + P VFL KV + Q
Sbjct: 256 YQKELTAAAVQGQNTIICAPTGCGKTIVALAI--SEYHLKQFPEKAKIVFLATKVDVYEQ 313
Query: 84 QAEAIKMH-----TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY 138
Q + K H +++V GDM D + + + H+++VMT QIL++ L+ +
Sbjct: 314 QYKLFKEHFSSKDPNIRVTGMCGDM-----DYLSVRWLIEHHDIVVMTAQILVNALQSAE 368
Query: 139 F-KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L ++ +++ DECH+ GKH Y IMT + L + +LP+I G+TAS
Sbjct: 369 VPSLEILSLILFDECHNTTGKHPYNNIMTRYLDTKLTSSTHSLPQIVGLTAS 420
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSE------LLPRHCTWKTKYIAGNNSGIQCQSR 434
EY + R ++FV+ A ++ + E L P K + SG+ +
Sbjct: 628 EYHNNDQTRTVMFVKTRALADAMKKWIDETDSLKFLKPGVLIGKGRKSNFTGSGM---TP 684
Query: 435 KKQNEIVEEFRRG-LVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQN 493
Q I+E F+ +++ATS+ +EG+D+ CNLV+M++ V +Q RGR R +
Sbjct: 685 NNQKGILESFKSSDQSKMLIATSVADEGIDIPQCNLVLMYEYVGNVVKMVQVRGRGRAEG 744
Query: 494 SDYLLMVKSGDSTTQSRL 511
S L+ + + + ++
Sbjct: 745 SRCFLISSNKERIAKEKI 762
>gi|376336566|gb|AFB32888.1| hypothetical protein 0_6448_02, partial [Abies alba]
Length = 150
Score = 85.9 bits (211), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PK LGDI+ES+AGAIF+D + V++ +PLL+PM+TPET+ HPVREL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTTKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 1339 SMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++ ASR A V V V F + KK A+K+A + L L+
Sbjct: 71 GLEYK-ASRTGNMATVEVYVDGVQIGFAQ---NPQKKMAQKLAARNALVILK 118
>gi|406356425|gb|AFS34609.1| retinoic acid-inducible protein I [Ictalurus punctatus]
Length = 937
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 23 RNYQLE---ALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVV 79
R YQ E A N L NTI+ TG GKT++A+ + + L + P VF+ KV
Sbjct: 254 RKYQKELATAAYNGL--NTIICAPTGCGKTIVAVDICEHH--LKKYPQKAKVVFMATKVE 309
Query: 80 LVPQQAEAIKMH----TDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGL- 134
+ QQ + K H D++V GDM + +S ++VL+MTPQIL++ L
Sbjct: 310 VYEQQYKLFKEHFSKDPDIRVKGVCGDMS-----DVSLPTLVSNNDVLLMTPQILVNALQ 364
Query: 135 RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
R LN +L+LDECH+ GKH Y IM+ + T +LP++ G TAS
Sbjct: 365 RGDVESLNTFTLLLLDECHNTTGKHPYNNIMSLYIDTKHTTHTHSLPQVVGFTAS 419
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
+++ATS+ +EG+D+ CNLV+M++ V + +Q RGR R Q S L+ S+ Q R
Sbjct: 702 ILIATSVADEGIDIPQCNLVLMYEYVGNVVTMVQVRGRGRAQGSRCFLI-----SSRQER 756
Query: 511 LENYLASGNKMRKEVLSHASL 531
++ + M +E L A++
Sbjct: 757 IDKEKLN---MEREKLVQAAV 774
>gi|150021479|ref|YP_001306833.1| ribonuclease III [Thermosipho melanesiensis BI429]
gi|149794000|gb|ABR31448.1| Ribonuclease III [Thermosipho melanesiensis BI429]
Length = 231
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 29/242 (11%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
+E ++ Y FR+ LL ALTH SY + Y+RLEFLGD+V+D L+ LY +Y L
Sbjct: 8 EIEHVIGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTL 67
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGW 1272
+ G + ++SA + D + K L K+IL E R EK S+
Sbjct: 68 NEGTMAQIKSAVTSEDILFEIAKKFNLGKYILLGKGERRSR------GSEKKSI------ 115
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVV---FQSI-RPLLEPMITPETMRFHPVRE 1328
L D++ESL AI++DS N +++ F I + ++ +T + + F +
Sbjct: 116 ---------LADVVESLIAAIYLDSNKNLKLIENLFSKIFKDYIDIFLTGKRI-FDYKTK 165
Query: 1329 LTEYCQKNHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKS 1388
L E Q + + + GK T+++ N +++ + KK A+K+A K +
Sbjct: 166 LQELTQDKFKQLPVYETTTVGGKFITTLKI--NNKIYSKA-KGSSKKDAEKLAAKIAYEK 222
Query: 1389 LR 1390
L+
Sbjct: 223 LK 224
>gi|376336574|gb|AFB32892.1| hypothetical protein 0_6448_02, partial [Pinus cembra]
gi|376336576|gb|AFB32893.1| hypothetical protein 0_6448_02, partial [Pinus cembra]
Length = 150
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PK LGDI+ES+AGAIF+D + V++ +PLL+PM+TPET+ HPVREL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTTKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 1339 SMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++ ASR A V V V F + KK A+K+A + L L+
Sbjct: 71 GLEYK-ASRTGNMATVEVFVDGVQIGFAQ---NPQKKMAQKLAARNALVILK 118
>gi|376336568|gb|AFB32889.1| hypothetical protein 0_6448_02, partial [Larix decidua]
gi|376336570|gb|AFB32890.1| hypothetical protein 0_6448_02, partial [Larix decidua]
gi|376336572|gb|AFB32891.1| hypothetical protein 0_6448_02, partial [Larix decidua]
Length = 150
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PK LGDI+ES+AGAIF+D + V++ +PLL+PM+TPET+ HPVREL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 1339 SMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++ ASR A V V V F + KK A+K+A + L L+
Sbjct: 71 GLEYK-ASRTGNMATVEVFVDGVQIGFAQ---NPQKKMAQKLAARNALVILK 118
>gi|361066575|gb|AEW07599.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|376336578|gb|AFB32894.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
gi|376336580|gb|AFB32895.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
gi|376336582|gb|AFB32896.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
gi|383164825|gb|AFG65201.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164826|gb|AFG65202.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164827|gb|AFG65203.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164828|gb|AFG65204.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164830|gb|AFG65205.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164831|gb|AFG65206.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164832|gb|AFG65207.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164833|gb|AFG65208.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164834|gb|AFG65209.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164835|gb|AFG65210.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164836|gb|AFG65211.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164837|gb|AFG65212.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164838|gb|AFG65213.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164839|gb|AFG65214.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164840|gb|AFG65215.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
gi|383164841|gb|AFG65216.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
Length = 150
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PK LGDI+ES+AGAIF+D + V++ +PLL+PM+TPET+ HPVREL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 1339 SMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++ ASR A V V V F + KK A+K+A + L L+
Sbjct: 71 GLEYK-ASRTGNMATVEVFVDGVQIGFAQ---NPQKKMAQKLAARNALVILK 118
>gi|361066573|gb|AEW07598.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
Length = 150
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
PK LGDI+ES+AGAIF+D + V++ +PLL+PM+TPET+ HPVREL E CQ+
Sbjct: 11 PKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRELQERCQQQAE 70
Query: 1339 SMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
++ ASR A V V V F + KK A+K+A + L L+
Sbjct: 71 GLEYK-ASRTGNMATVEVFVDGVQIGFAQ---NPQKKMAQKLAARNALVILK 118
>gi|312622598|ref|YP_004024211.1| ribonuclease iii [Caldicellulosiruptor kronotskyensis 2002]
gi|312203065|gb|ADQ46392.1| ribonuclease III [Caldicellulosiruptor kronotskyensis 2002]
Length = 222
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y F+D +LL ALTH S CY+RLEFLGDA L+ ++ YL+ +P
Sbjct: 1 MEEIEKALGYKFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLFVHFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E ++ + E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGKREKMEKFH------ENKSI---- 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNR--EVVFQSIRPLLEPMITPETMRFHPVRE 1328
L D++E++ GAIF++SG + +++ ++P ++ + + + +
Sbjct: 110 -----------LADVVEAIFGAIFIESGFEKLEKIIVNLLKPYIQKAVAGKLFYDYKTK- 157
Query: 1329 LTEYCQK 1335
L E+ QK
Sbjct: 158 LQEFVQK 164
>gi|374854311|dbj|BAL57196.1| ribonuclease III [uncultured prokaryote]
Length = 239
Score = 85.1 bits (209), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 105/238 (44%), Gaps = 39/238 (16%)
Query: 1161 SFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLT 1218
+FRD SLL+ ALTH SY PE+ +RLEFLGDAVLD+++ ++Y+ YP L G LT
Sbjct: 20 TFRDWSLLLRALTHRSYCNEHPEVTEDNERLEFLGDAVLDFIVGEWVYHHYPELREGELT 79
Query: 1219 DMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSF 1278
+RSA V N+ L+S +D L LG+
Sbjct: 80 RLRSALVRNE--QLASFAR-------------------QIDLGAALRLGAGEAASGARQR 118
Query: 1279 PKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITP--ETMRFHPVRELTEYCQKN 1336
LG E+L GA+++D+G E + +RP LE + T P L E+ Q
Sbjct: 119 TSLLGSAFEALIGALYLDAGL--ETASRFVRPFLEKTVAALEWTHLLDPKSRLQEWAQ-- 174
Query: 1337 HFSMKKPVASRISGKAAVTVEVQA--NGRLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
A R+ VT+ + LFE D+ + + + +L+A+
Sbjct: 175 --------AQRLGTPRYVTIAAHGPEHAPLFEVEVYIGDRAYGRGAGPNKQIAALKAA 224
>gi|321457594|gb|EFX68677.1| hypothetical protein DAPPUDRAFT_329838 [Daphnia pulex]
Length = 291
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 1146 ERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYL 1205
+ L ++ E++L+Y+ D +L+EA THG+ M + YQRLE +GDA L +L +
Sbjct: 79 DELNSLAKFENILHYTSNDKEVLLEAFTHGNSMKSQ---NYQRLELIGDAALGFLSALNF 135
Query: 1206 YNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHI----------LHASHELYKRIN 1255
+ K + G +T +RSA V ND + + + K+G H+H+ L+ E+ +R N
Sbjct: 136 FIKSLTHTSGDITKLRSACVCNDTFGVWAAKYGFHEHVQNLPPILLKQLNDFLEVVEREN 195
Query: 1256 ITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVV 1304
T FE+ + + + P L D+ E++ GAI +D+ + E +
Sbjct: 196 FTFAPFERELAANGQIMATQVAIPSFLADVFEAVEGAIIIDANLSFETL 244
>gi|312127786|ref|YP_003992660.1| ribonuclease iii [Caldicellulosiruptor hydrothermalis 108]
gi|311777805|gb|ADQ07291.1| ribonuclease III [Caldicellulosiruptor hydrothermalis 108]
Length = 222
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 24/169 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y F+D +LL ALTH S CY+RLEFLGDA L+ +++ YL+ +P
Sbjct: 1 MEEIEKALGYKFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELVVSKYLFVNFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E EK +
Sbjct: 60 DLSEGELTNIRAAVVCSQTLSEVAEKLNLKNHIIFGKRE----------KMEKFHENKSI 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNR--EVVFQSIRPLLEPMIT 1317
L D++E++ GAIF++SG ++ +++ ++P ++ +
Sbjct: 110 -----------LADVLEAIFGAIFIESGFDKLEKIIVNLLKPYIQKAVA 147
>gi|334303056|gb|AEG75816.1| retinoic acid inducible protein I [Anser anser]
Length = 933
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +N ++ TGSG+T IA+++ + VFL KV +
Sbjct: 245 ARSYQIELAQPAINGKNALICAPTGSGRTFIALLVCEHQFQNMPAGRKGKVVFLATKVPV 304
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF- 139
QQ K H + + G G +F + + + ++++V+TPQIL++
Sbjct: 305 YEQQKNVFKQHFERQGYSIQGVSGENF-SNVSVENVIEDNDIIVLTPQILVNSFEDGTLT 363
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + + S LP+I G+TAS
Sbjct: 364 SLSVFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSPASQLPQILGLTAS 413
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
+++ATS+ +EG+D+ CNLV++++ S V IQ RGR R S +L+ + +
Sbjct: 694 LLIATSVADEGIDIAQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENEK 753
Query: 511 LENY 514
Y
Sbjct: 754 CNRY 757
>gi|312135000|ref|YP_004002338.1| ribonuclease iii [Caldicellulosiruptor owensensis OL]
gi|311775051|gb|ADQ04538.1| ribonuclease III [Caldicellulosiruptor owensensis OL]
Length = 222
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y F D +LL ALTH S CY+RLEFLGDA L+ ++ YLY +P
Sbjct: 1 MEEIEKALGYKFEDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLYVYFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E ++ +E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKREKMEKF------YENKSI---- 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
L D++E+L GAIF++SG + V + I LL+P I
Sbjct: 110 -----------LADVLEALFGAIFIESGFD--TVEKIIVNLLKPYI 142
>gi|328872313|gb|EGG20680.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
Length = 2876
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Query: 365 SGLLTEKIVCLIESLLEYRGVEDI--RCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI 422
S L + K + L++ LL+ + DI R IIFV+ TA+ L +L + H + ++
Sbjct: 719 SCLESSKYIALVD-LLKKKHSSDIEFRGIIFVQMRSTAMQLTKMLQKE-SFHKDYNINFL 776
Query: 423 AGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
G+N+G+ + Q+ I+E+F+ G ++VAT++LEEGLDV CNLVI F+ ++ S
Sbjct: 777 IGHNAGVGMDT-IDQHRIIEQFKLGHCKLLVATNVLEEGLDVSECNLVICFESDFSMRSM 835
Query: 483 IQSRGRARMQNSDYLLM 499
IQ RGRAR +N +++ +
Sbjct: 836 IQRRGRARSENGNFMYL 852
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 21/217 (9%)
Query: 14 VSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS--PFVA 71
+S+ P+ +Q+E+ A K N+I+ + TG GKTLI+IML+ + L K S P VA
Sbjct: 337 LSSQVTPY--EHQVESFYQACKFNSIIVIPTGYGKTLISIMLINAMHELNGKKSADPKVA 394
Query: 72 ----VFLVPKVVLVPQQAEAIKMHT-----DLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
+FLV K+ LV QQA+AI+ ++ + G G + + +M + +V
Sbjct: 395 KRMSLFLVTKIPLVAQQAKAIEFYSPHLNLAVASGGGGGGGVGSNGNSTSLNFDMLRPDV 454
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD-SNLP 181
+V T ++ L + +I DE HHA G H Y C M R ++ D +N P
Sbjct: 455 VVCTVDCAVNWLGNMKIAVEDFHTIIFDEAHHATGDHSY-CTMV----RRVQLADRANQP 509
Query: 182 RIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVY 218
RI G+TASP + + ++ D++ +N++++
Sbjct: 510 RILGLTASP--CVIGKDSKAMRAEMEDIQKNLNARIF 544
>gi|344995859|ref|YP_004798202.1| ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
gi|343964078|gb|AEM73225.1| Ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
Length = 222
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y+F+D +LL ALTH S CY+RLEFLGDA L+ ++ YL+ +P
Sbjct: 1 MEEIERALGYTFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLFVHFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E ++ + E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKREKMEKFH------ENKSI---- 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
L D++E++ GAIF++SG + +V + I LL+P I
Sbjct: 110 -----------LADVLEAIFGAIFIESGFD--IVEKIIVNLLKPYI 142
>gi|320161647|ref|YP_004174872.1| ribonuclease III [Anaerolinea thermophila UNI-1]
gi|319995501|dbj|BAJ64272.1| ribonuclease III [Anaerolinea thermophila UNI-1]
Length = 237
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 1158 LNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPG 1215
L SF+ LL ALTH SY+ PE +RLEFLGDAVLD+++ +LYN+YP + G
Sbjct: 17 LGLSFKSFFLLSRALTHRSYLNEHPEAIEDNERLEFLGDAVLDFVVGAWLYNRYPDMPEG 76
Query: 1216 YLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESV 1275
LT MRS V S E VD L LG
Sbjct: 77 DLTRMRSVLV---------------------STEQLSEFARKVDLGRALRLGKGETQAGG 115
Query: 1276 TSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP----MITPETMRFHPVRELTE 1331
P L D E++ GAI++DSG E V + I P+LE ++ +T+ P L E
Sbjct: 116 RDRPALLCDAFEAVIGAIYLDSGI--EGVRRFIEPMLEKAADEILARQTIE-DPKSMLQE 172
Query: 1332 YCQKNHFSMKKPVASRISG---KAAVTVEVQANGRLF 1365
+ Q F + + SG V+V NG+++
Sbjct: 173 WAQGQGFQAPRYIVRSSSGPEHSKQFEVDVLINGQIY 209
>gi|353251997|pdb|4A2P|A Chain A, Structure Of Duck Rig-I Helicase Domain
gi|353252013|pdb|4A36|A Chain A, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
gi|353252014|pdb|4A36|B Chain B, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
Length = 556
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +N ++ TGSGKT ++I++ + + VFL KV +
Sbjct: 8 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 67
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF- 139
QQ K H + + G G +F + + K + +++V+TPQIL++
Sbjct: 68 YEQQKNVFKHHFERQGYSVQGISGENFSNVSVEK-VIEDSDIIVVTPQILVNSFEDGTLT 126
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + + S LP+I G+TAS
Sbjct: 127 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSA-SQLPQILGLTAS 175
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 437 QNEIVEEFRRGLVN-VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q +++ F+ N +++ATS+ +EG+D+ CNLV++++ S V IQ RGR R S
Sbjct: 441 QKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 500
Query: 496 YLLMVKSGDSTTQSRLENY 514
+L+ + + Y
Sbjct: 501 CILVTSKTEVVENEKCNRY 519
>gi|302872013|ref|YP_003840649.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
gi|302574872|gb|ADL42663.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
Length = 222
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y F D +LL ALTH S CY+RLEFLGDA L+ ++ YLY +P
Sbjct: 1 MEEIEKALGYKFEDKNLLKLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLYVYFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E ++ + E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKREKMEKFH------ENKSI---- 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
L D++E+L GAIF++SG + V + I LL+P I
Sbjct: 110 -----------LADVLEALFGAIFIESGFD--TVEKIIVNLLKPYI 142
>gi|78186018|ref|YP_374061.1| ribonuclease III [Chlorobium luteolum DSM 273]
gi|90101633|sp|Q3B6L3.1|RNC_PELLD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|78165920|gb|ABB23018.1| RNAse III [Chlorobium luteolum DSM 273]
Length = 276
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 1167 LLVEALTHGSYM----LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRS 1222
L ALTH S + PEI R QRLEFLGD+VL +I+ YLY ++P + G L+ R+
Sbjct: 47 LYATALTHRSMVHDTTAPEITRSNQRLEFLGDSVLGLIISEYLYRRFPEGTEGELSSYRA 106
Query: 1223 ASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFPKAL 1282
VN A + L H++ +RI + + L
Sbjct: 107 KIVNGKSLAGFARNLDLGIHLIIGESADQQRIRTSTST---------------------L 145
Query: 1283 GDIIESLAGAIFVDSGCN--REVVFQSI--RPLLEPMITPETMRFHPVRELTEYCQKNHF 1338
D E+L GAI++D G + RE + + I P E M++ E H R L E+ Q +
Sbjct: 146 ADAFEALTGAIYLDRGLDAVREFIEEQIIDSPAFEAMVSTENN--HKSR-LIEHTQSHQ- 201
Query: 1339 SMKKPVASRISGKAA-----VTVEVQANG-RLFEHTFLDADKKTAKKVACKEVLKSLRAS 1392
+ PV + +S + A T+EV NG RL T L KK A+++A +E + +L +
Sbjct: 202 -LPPPVYTVLSEEGAEHEKTFTIEVSCNGRRLGRGTAL--RKKDAEQLAAEEAMGALERA 258
Query: 1393 FPG 1395
G
Sbjct: 259 LTG 261
>gi|145506903|ref|XP_001439412.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830350|emb|CAI39053.1| Ribonuclease with two RNaseIII domains [Paramecium tetraurelia]
gi|124406596|emb|CAK72015.1| unnamed protein product [Paramecium tetraurelia]
Length = 632
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 132/331 (39%), Gaps = 77/331 (23%)
Query: 981 VLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAAL 1040
V EAI T + E+LE LGDS LKY + +F+ Y+ EG ++ + R+I N L
Sbjct: 344 VEEAIVTSSSNFKRNYENLELLGDSVLKYVVTVDIFRQYELLDEGEMTSLRSRLIMNTFL 403
Query: 1041 CKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVA 1100
+L + L +I + K P N + + K+++ A
Sbjct: 404 AQLFEQLGLQHYIINQDLHFKQIRNPLVND---------------MISSDNKQLQISQKA 448
Query: 1101 DVVEALIGA-FLSTGGENVGLIFLDRIGIKVDFVNVPYQR---QFQVHAERLVNVRHLES 1156
D+ EA++G F T +I L R + F YQ F+ E H+E
Sbjct: 449 DIYEAIVGGVFEVTQSLYEYIIILRRTNFPISF----YQDILFDFEPITEY---TEHIE- 500
Query: 1157 LLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY-------NKY 1209
+ +Y F +P L A+ P Y RLEFLGDA ++ L+ Y++ +
Sbjct: 501 IRDYKFNNPQLFEIAIN---------PLQYDRLEFLGDAAIELLVISYIFRAAREKQQRN 551
Query: 1210 PG--LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLG 1267
P L+PG L+ + + N +++ GL HI
Sbjct: 552 PNWILNPGLLSTWKQQLLGNKFMGEQTIRMGLKPHI------------------------ 587
Query: 1268 STFGWESVTSFPKALGDIIESLAGAIFVDSG 1298
PK GDI ES+A AI +DSG
Sbjct: 588 --------NEIPKLYGDIFESVAAAILLDSG 610
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 27/196 (13%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+ES+LNY ++ EA+ S R Y+ LE LGD+VL Y++TV ++ +Y L
Sbjct: 335 VESILNYQ-----VVEEAIVTSS---SNFKRNYENLELLGDSVLKYVVTVDIFRQYELLD 386
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
G +T +RS + N A + GL +I++ + N V+ +
Sbjct: 387 EGEMTSLRSRLIMNTFLAQLFEQLGLQHYIINQDLHFKQIRNPLVN-------------D 433
Query: 1274 SVTSFPKAL-----GDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETM-RFHPVR 1327
++S K L DI E++ G +F + E + R + + F P+
Sbjct: 434 MISSDNKQLQISQKADIYEAIVGGVFEVTQSLYEYIIILRRTNFPISFYQDILFDFEPIT 493
Query: 1328 ELTEYCQKNHFSMKKP 1343
E TE+ + + P
Sbjct: 494 EYTEHIEIRDYKFNNP 509
>gi|294881176|ref|XP_002769282.1| hypothetical protein Pmar_PMAR007696 [Perkinsus marinus ATCC 50983]
gi|239872560|gb|EER02000.1| hypothetical protein Pmar_PMAR007696 [Perkinsus marinus ATCC 50983]
Length = 1394
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-----PFVAVFLVP 76
R YQ E L+ + ++T+ F+ TGSGKTL+A+ LL + R+ +F P
Sbjct: 4 REYQAEVLDKIRQHRSTVAFMPTGSGKTLVAVRLLHERVEVQRRRQEEGELKKACIFTAP 63
Query: 77 KVVLVPQQAEAIKMH---TDLKVGKYWGDMGVDF-WDGATWKEEMSKHEVLVMTPQILLD 132
VL QQA+ I+ H D KV G+M W+ W + + + VLV P++L
Sbjct: 64 NKVLCHQQAKYIEKHLGHADAKVIILTGEMKDTVSWEEEEWAKTLRESSVLVCVPEVLRR 123
Query: 133 GLRLSYFKLNMIKVLILDECHH------ARGKHQYACIMTEFYHRLLETGDSNLPRIFGM 186
L Y K + I +I DECHH A H Y C + + R G+
Sbjct: 124 ALESGYVKADSIDTIIFDECHHCVSKNGANSGHAY-CHLAQLAK--------GAERFVGL 174
Query: 187 TASPIKSK 194
TASP+ K
Sbjct: 175 TASPLNCK 182
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 428 GIQCQSRKKQNEIVEEF-----RRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSF 482
G + +S Q E +E F R +++ATS+ +EG+DV C+ VI++D V +
Sbjct: 475 GGRYESASTQAEAIERFKETAKRDDKDAILIATSVCDEGVDVPVCDRVILWDMPPNVRCY 534
Query: 483 IQSRGRARMQN--SDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHAS---LPCSPLN 537
IQ RGRAR S + LMV GD + + + ++E ++ + C +
Sbjct: 535 IQRRGRARSLEPPSKFFLMV--GDQEEEKGCAKAALTDFQNKEEQMARLVDFWIQCG-TD 591
Query: 538 NHMYGEDFYHVEST-----GTIATLSSSVSLIYFYCSRL-PSDGYFKPTPKFHINKE 588
+ ED V + G T + +++ +CS L +D +F P P + +
Sbjct: 592 DDEESEDAGIVPAVVIGRDGVRITCRRAKEVLFTFCSTLRATDEFFSPEPWIYTESD 648
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 37/336 (11%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQL----FKTYQNNHEGLLSVKKERIISNA 1038
E +T K+CQ E E LG+S L+ S+ + F + EG L+ +++IIS
Sbjct: 946 EVLTPKRCQALVDSERYEYLGNSILQLVVSESVWSKQFSAGGASLEGKLTSDRQKIISRK 1005
Query: 1039 ALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRK------ 1092
+ + E + ++ S P + G + ++ S + + G
Sbjct: 1006 RMSQKAVEGGILSLMQMRS--PAAVGVGGAATKDILVSITSAARSCMLALIGALCDSHGV 1063
Query: 1093 --KVKSKTVADVVEALIGAFL---STGGENVGLIFLDRIGIKVDFVNVPYQ--RQFQVHA 1145
VK+ T +VE + L S+ GE LD + DF + R+ V
Sbjct: 1064 DCVVKAVTKFKLVEIVPACGLLPHSSAGEGA---TLDDWLLPDDFPQLVRGKLREPTVTY 1120
Query: 1146 ERLVNVRHLES--LLNYSF-RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLIT 1202
+ L + S + Y F + P LL E+LTH S +RLE++GDAVL ++
Sbjct: 1121 DTLSAAQQGSSVDIGGYVFEKHPWLLTESLTHASVTSVSASYSNERLEWIGDAVLGAVVL 1180
Query: 1203 VYLYN-KYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHA-SHELYKRINITVDS 1260
+L+ + P P + + +A+ N A +V+ + +A S L + +N V+
Sbjct: 1181 QWLFKLEKP---PKNIVEAFTANTCNAHLAKVAVERLGVPDLFNAFSAPLLRAVNRFVNE 1237
Query: 1261 FEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVD 1296
G V PK L D +E++ GA+++D
Sbjct: 1238 LFS-------GRAVVRRGPKPLADCVEAIIGAVWLD 1266
>gi|222529151|ref|YP_002573033.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
gi|222455998|gb|ACM60260.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
Length = 222
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 25/188 (13%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y F D +LL ALTH S CY+RLEFLGDA L+ +++ YL+ +P
Sbjct: 1 MEEIEKALGYKFMDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELVVSKYLFVHFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E ++ + E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGKREKMEKFH------ENKSI---- 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNR--EVVFQSIRPLLEPMITPETMRFHPVRE 1328
L D++E++ GAIF++SG + +++ ++P ++ + + + +
Sbjct: 110 -----------LTDVVEAIFGAIFIESGFEKLEKIIVNLLKPYIQKAVAGKLFYDYKTK- 157
Query: 1329 LTEYCQKN 1336
L E+ QK
Sbjct: 158 LQEFVQKK 165
>gi|405973602|gb|EKC38304.1| Interferon-induced helicase C domain-containing protein 1
[Crassostrea gigas]
Length = 1260
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 17/224 (7%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R+YQ+E +L+ +N+++ TGSGKT +A+ +++ + ++ +FLV + L
Sbjct: 494 RSYQMELARPSLEGKNSVIVAPTGSGKTHVALYIIKHHMESIKSIRHPKVIFLVEQSALA 553
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKL 141
QQ + + KV G + + E K ++LV+T QILL+ LR +
Sbjct: 554 EQQGKQCTTYLPCKVK---------VITGESQRNERMKRDLLVVTAQILLNALRDGIVSV 604
Query: 142 NMIKVLILDECHHARGKHQYACIMTEFYHRLLETGD--SNLPRIFGMTASPIKSKVSSSE 199
+++ DECHH H Y IM + L+ + LP I GMTAS V +
Sbjct: 605 TDFSLMVFDECHHTNDNHSYNMIMNRYLDIKLQDRERAKTLPMIVGMTAS---VGVGKAT 661
Query: 200 QDYWQKIHDLETL--MNSKVYTCASESVLSNFIPFSTAKFKFYK 241
+D K H + L M++++ +E+++ + K K YK
Sbjct: 662 EDTKAKKHIEKVLANMDAEMIVTVTENIMELKKYVNIPKQKLYK 705
Score = 73.6 bits (179), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 387 DIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYI---AGNNSGIQCQSRKKQNEIVEE 443
D R I+FV+ +++ + E +++ A SG ++ +Q+EI+E
Sbjct: 949 DARVIVFVKTRELVKAIETYMKETEELRILNPIQFVGVQANKESG--GMTKVEQDEILEL 1006
Query: 444 FRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSG 503
F+ G VI+ATS+ EEGLD+Q C+LV+ +D + +QSRGR R ++S Y+++ S
Sbjct: 1007 FKEGNHKVIIATSVAEEGLDIQKCSLVVRYDHVTNEIAMVQSRGRGRAEDSKYVVLA-SE 1065
Query: 504 DSTTQSRLENYLASGNKMRKEVLSHA 529
DS T + E N+MR+ +++ A
Sbjct: 1066 DSNTIKKEE-----LNQMRENMMNRA 1086
>gi|110834492|ref|YP_693351.1| ribonuclease III [Alcanivorax borkumensis SK2]
gi|123345468|sp|Q0VP19.1|RNC_ALCBS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|110647603|emb|CAL17079.1| ribonuclease III [Alcanivorax borkumensis SK2]
Length = 228
Score = 83.6 bits (205), Expect = 8e-13, Method: Composition-based stats.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
++ L + L Y F+D SLL ALTH S R Y+RLEFLGDA L +I+V L+ ++
Sbjct: 4 DLNRLMARLGYQFQDLSLLELALTHRSV---SRHRNYERLEFLGDAQLGQIISVALFEQF 60
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P + G LT MR++ V AL + + GL ++++ EL F + S+
Sbjct: 61 PEAAEGQLTRMRASLVRGQTLALVARELGLGEYLVLGGGELKS------GGFRRDSI--- 111
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSG---CNREVVFQSIRPLLEPMITPETMRFHPV 1326
L D +ES+ GA+ +D G C REVV P L+ I+P++ +
Sbjct: 112 ------------LADALESIIGAMLLDGGEPRC-REVVLAWFAPRLDA-ISPQSAQKDAK 157
Query: 1327 RELTEYCQKNHFSMKKPVASRISGKA-AVTVEVQANGRLFEHTFL--DADKKTAKKVACK 1383
L E+ Q F + +++ G A T +VQ + + F+ A ++ A++ A
Sbjct: 158 TRLQEWLQARKFELPTYEVTQVEGLAPKQTFDVQCSLDNVQQIFIAQGASRRKAEQEAAS 217
Query: 1384 EVLKSLRASF 1393
L+ L +
Sbjct: 218 LALEWLEQQY 227
>gi|254428849|ref|ZP_05042556.1| ribonuclease III [Alcanivorax sp. DG881]
gi|196195018|gb|EDX89977.1| ribonuclease III [Alcanivorax sp. DG881]
Length = 228
Score = 83.2 bits (204), Expect = 9e-13, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 30/249 (12%)
Query: 1150 NVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKY 1209
++ L + L Y F+D SLL ALTH S R Y+RLEFLGDA L +I+V L+ ++
Sbjct: 4 DLNRLMARLGYQFQDISLLELALTHRSV---SRHRNYERLEFLGDAQLGQIISVALFEQF 60
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P + G LT MR++ V AL + + GL ++++ EL F + S+
Sbjct: 61 PEAAEGQLTRMRASLVRGQTLALVARELGLGEYLVLGGGELKS------GGFRRDSI--- 111
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCN--REVVFQSIRPLLEPMITPETMRFHPVR 1327
L D +ES+ GA+ +D G + REVV P L+ I+P++ +
Sbjct: 112 ------------LADALESIIGAMLLDGGESRCREVVLCWFAPRLDA-ISPQSAQKDAKT 158
Query: 1328 ELTEYCQKNHFSMKKPVASRISGKA-AVTVEVQANGRLFEHTFL--DADKKTAKKVACKE 1384
L E+ Q F + +++ G A T +VQ + + F+ A ++ A++ A
Sbjct: 159 RLQEWLQARKFELPTYEVTQVEGLAPKQTFDVQCSLDQVQQIFIAQGASRRKAEQEAASL 218
Query: 1385 VLKSLRASF 1393
L+ L +
Sbjct: 219 ALEWLEQQY 227
>gi|413918885|gb|AFW58817.1| hypothetical protein ZEAMMB73_714278 [Zea mays]
Length = 306
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%)
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVRELTEYCQKNHFS 1339
+ LGDI+ES GA+ +DSG N V++ + LL+P+++ M P+REL E CQ N F
Sbjct: 2 QVLGDIVESCVGAVLLDSGFNLNHVWKLMLMLLKPILSFCGMHIDPMRELRETCQYNGFD 61
Query: 1340 MKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
+ P ++ +G+ V VEV NG++ T + + K A+KVA +E L L+
Sbjct: 62 LGLPEPTKYNGEFHVKVEVNINGKMISCTAANRNSKDARKVAAQETLSKLK 112
>gi|217069801|gb|ACA61272.1| retinoic acid inducible protein I [Anas platyrhynchos]
gi|388897634|gb|AFK82315.1| retinoic acid inducible protein I [Anas platyrhynchos]
Length = 933
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +N ++ TGSGKT ++I++ + + VFL KV +
Sbjct: 246 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 305
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF- 139
QQ K H + + G G +F + ++ + +++V+TPQIL++
Sbjct: 306 YEQQKNVFKHHFERQGYSVQGISGENF-SNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 364
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + + S LP+I G+TAS
Sbjct: 365 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSA-SQLPQILGLTAS 413
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 437 QNEIVEEFRRGLVN-VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q +++ F+ N +++ATS+ +EG+D+ CNLV++++ S V IQ RGR R S
Sbjct: 679 QKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 738
Query: 496 YLLMVKSGDSTTQSRLENY 514
+L+ + + Y
Sbjct: 739 CILVTSKTEVVENEKCNRY 757
>gi|312793340|ref|YP_004026263.1| ribonuclease iii [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180480|gb|ADQ40650.1| ribonuclease III [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 222
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 24/166 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E L Y+F+D +LL ALTH S CY+R EFLGDA L+ ++ YL+ +P
Sbjct: 1 MEEIERALGYTFKDKNLLRLALTHKSATHSN-KNCYERFEFLGDAALELAVSKYLFVHFP 59
Query: 1211 GLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTF 1270
LS G LT++R+A V + + + K L HI+ E ++ + E S+
Sbjct: 60 ELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKREKMEKFH------ENKSI---- 109
Query: 1271 GWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
L D++E++ GAIF++SG + +V + I LL+P I
Sbjct: 110 -----------LADVLEAIFGAIFIESGFD--IVEKIIVNLLKPYI 142
>gi|346972329|gb|EGY15781.1| hypothetical protein VDAG_06945 [Verticillium dahliae VdLs.17]
Length = 1187
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/536 (22%), Positives = 229/536 (42%), Gaps = 104/536 (19%)
Query: 164 IMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASE 223
IM FYH ++ S +P + G+TASPI ++ LE L + C +
Sbjct: 2 IMMNFYHPRKQSALS-VPHVLGLTASPIMRS----------RLEGLEALEQTLDSVCVTP 50
Query: 224 SV----LSNFIPFSTAKFKFYKYDEIPHALYTHLADELAMIELKHTR-SLENLDLNE--- 275
+ L + T + Y+ T DE + + R + N+D+ +
Sbjct: 51 RLHRDDLMTHVKRPTVCYVHYET--------TDAKDEPKPVSISSLREACRNMDIRQDPY 102
Query: 276 -----------AQAELIR----------KKVSKINSTLLYCLSELGVWLALKAAETISCY 314
A+ ELI+ +++ + L L +LG W A
Sbjct: 103 VICLRDKGTDRARRELIKVLTSHKTDSQQQMKSFFNQSLRVLRDLGPWAA---------- 152
Query: 315 ESDFFAWEQLDGFGETI------IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLL 368
+++ W+ + F I + + ++ Q L + + SI + L +
Sbjct: 153 --EYYIWKVVTDFLAIIEARDHRMNQRNTEEKQYLANIL---RQISISEPPVSMLSAHNT 207
Query: 369 TEKIVCLIESLLEYRGVEDIRCIIFV-ERVITAIVLQSLLSELLPRHCTWKTKYIAGNNS 427
+ K++ L+E L + + IIFV ER A++ + S L ++ + G ++
Sbjct: 208 SNKVMVLME-YLSSKATDGTVGIIFVKERSTAAMLAHVIESHPLTQNRHSSVGVVVGAST 266
Query: 428 GIQCQSRKK----------QNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSR 477
+ RKK + E + +FR G +N+++ATS+LEEG+DV +CNLVI FD
Sbjct: 267 HL---VRKKDMWDLSRAAHETEPLLQFRSGHLNLLIATSVLEEGIDVPACNLVICFDEPE 323
Query: 478 TVCSFIQSRGRARMQNSDYLLMVKSGDSTTQS--RLENYLASG-NKMRKEVLSHASLPCS 534
+ +F+Q RGRAR ++S ++++ D Q +E + + + ++E+ + S
Sbjct: 324 NLKAFVQRRGRARKKDSSLVVLLPGTDHVPQDWESMEATMRTHYEREQREIQIMEQIEAS 383
Query: 535 PLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINK--EMGI- 591
+ Y E Y VEST ++ + + +C +L + P++ I + + G+
Sbjct: 384 --ESAKYEE--YVVESTNARLDFENAKAHLSNFCGQLSPGEFIDKRPEY-IPRVVDNGVP 438
Query: 592 ----CTLYLPNNCP--IQTVIAQGNIKTLKQA---ACLEACKKLHQIGALTDNLLP 638
T+ LP+ P ++ ++ + K+ QA A +A L++ G + +++LP
Sbjct: 439 PSLRVTVLLPSYVPAAVRHAESRRSWKSEHQASKDAAFQAYVALYKAGLVNEHMLP 494
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 184/453 (40%), Gaps = 68/453 (15%)
Query: 904 YLSKCRQQKQKEPSKISFELPPELCRIIMAP------ISLSTFYSFTFVPSIMHRLQSLL 957
YL+ QQK + + P R+ AP I L Y +P I H ++ L
Sbjct: 703 YLALLHQQKVNDLLPQATNKKP-YARVYPAPWAKVDTIPLDHAYFGALIPFISHIVEVRL 761
Query: 958 LAVNLKNMLLDHCMQNVTIPTIKVLEAITTKKCQEDFHLESLETLGDSFLKYAASQQLFK 1017
+A L + LL N + P++ VL AI+TK E + E LE LGDS LK +
Sbjct: 762 VAEQLSSSLLRDL--NFSDPSL-VLAAISTKGSLEATNYERLELLGDSILKLCTTANAAA 818
Query: 1018 TYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELND 1077
+ ++SN+ LC+ + L F+ TE+F + W +ND
Sbjct: 819 LHG-------------LVSNSRLCRAALDAGLDKFVLTENFTCRTW-------RPIYVND 858
Query: 1078 DSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPY 1137
R +G + + +KT+AD+VEALIGA GG L + ++D+ +P
Sbjct: 859 MMEKGARD---SGPRIMSTKTLADIVEALIGAAYIDGGLPKALGCISIFLRELDWKPLPA 915
Query: 1138 -QRQFQVHAERLVNVR----HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFL 1192
Q A V + LE L+ Y+ LL A +G + C+ +
Sbjct: 916 CQEILYSLASPDVPLPPMLVPLEDLIGYTMH---LLKTASVNGDLLGFLALECHAEED-- 970
Query: 1193 GDAVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYK 1252
+ ++D + + P S G ++ + K L K + H+S E+ +
Sbjct: 971 -EVIIDIDFSPSDTDFNPQNSAGVEQKLKQ----------TRRKIPLWKFMRHSSIEVVQ 1019
Query: 1253 R--------INITVDSFEKLSLGSTFGWESVTSF--PKALGDIIESLAGAIFVDSG---- 1298
+ ++ L GS++ W + K D++E++ GA++VDSG
Sbjct: 1020 QQTKAASVHADLRGQIMHALEHGSSYPWSLLARLHPAKFFSDMVEAVLGAVWVDSGDMGA 1079
Query: 1299 CNREVVFQSIRPLLEPMITPETMRFHPVRELTE 1331
C R I P+L + + HP +EL E
Sbjct: 1080 CIRVAERLGILPVLSRLAKEDVHVLHPKQELGE 1112
>gi|353252003|pdb|4A2W|A Chain A, Structure Of Full-Length Duck Rig-I
gi|353252004|pdb|4A2W|B Chain B, Structure Of Full-Length Duck Rig-I
Length = 936
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +N ++ TGSGKT ++I++ + + VFL KV +
Sbjct: 249 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF- 139
QQ K H + + G G +F + ++ + +++V+TPQIL++
Sbjct: 309 YEQQKNVFKHHFERQGYSVQGISGENF-SNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + + S LP+I G+TAS
Sbjct: 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSA-SQLPQILGLTAS 416
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 437 QNEIVEEFRRGLVN-VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q +++ F+ N +++ATS+ +EG+D+ CNLV++++ S V IQ RGR R S
Sbjct: 682 QKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 741
Query: 496 YLLMVKSGDSTTQSRLENY 514
+L+ + + Y
Sbjct: 742 CILVTSKTEVVENEKCNRY 760
>gi|327283103|ref|XP_003226281.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Anolis carolinensis]
Length = 1006
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 369 TEKIVCLIESLL-EYRGVEDIRCIIFVERVITAIVLQSLLSELLPR--HCTWKTKYI--A 423
EK+ L E+L+ E+ + R IIF + +A L + E P+ K Y+ A
Sbjct: 676 NEKLKLLRETLMTEFTKKPEARGIIFTKTRQSAFALYEWIKEN-PKFEEAGVKAHYLIGA 734
Query: 424 GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
G+NS + ++ +Q +++E+FR G +N+++AT++ EEGLD+ CN+VI + + +
Sbjct: 735 GHNSEFKPMTQNEQKDVIEKFRIGKINLLIATTVAEEGLDIPECNIVIRYGLVTNEIAMV 794
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLPCSPLNNHMYGE 543
Q+RGRAR S Y+L V SG S R + M + + +P + +N + G
Sbjct: 795 QARGRARADESTYVL-VASGGSGAAEREGVNVFREKMMHRAIKRVQDMPRAEYDNKIRGF 853
Query: 544 DFYHVESTGTIATLSSSV------SLIYFYC 568
+ A S SLI F C
Sbjct: 854 QLQSIMEVKMKAKKEQSKAYKKDPSLIKFLC 884
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVF-LVPKVVL 80
R+YQ+E + AL+ +N ++ L TGSGKT +A+ + + + + V LV KV L
Sbjct: 302 RDYQMEVAQPALEGKNILLCLPTGSGKTRVAVYIAKDHLDKKKDAGEEGKVIVLVNKVPL 361
Query: 81 VPQQAEAIKMHTDLKVG-KYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSY- 138
V Q + H LK K G G+ ++ + + + V++ T QIL + L+ +
Sbjct: 362 VEQHFRK-EFHPYLKHSYKVIGLSGMTQLK-ISFPKVVKDNHVIICTAQILENALQNAEQ 419
Query: 139 -----FKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSN--------LPRIFG 185
+L++ ++I+DECHH + + Y IM + + ++ P+I G
Sbjct: 420 DEEEGVQLSVFSLIIIDECHHTQKEAVYNNIMRRYLKQKMQNEKRRKMGKPLVPQPQILG 479
Query: 186 MTASP 190
+TASP
Sbjct: 480 LTASP 484
>gi|353251998|pdb|4A2Q|A Chain A, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353251999|pdb|4A2Q|B Chain B, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353252000|pdb|4A2Q|D Chain D, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353252001|pdb|4A2Q|E Chain E, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
Length = 797
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +N ++ TGSGKT ++I++ + + VFL KV +
Sbjct: 249 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 308
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF- 139
QQ K H + + G G +F + ++ + +++V+TPQIL++
Sbjct: 309 YEQQKNVFKHHFERQGYSVQGISGENF-SNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + + S LP+I G+TAS
Sbjct: 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSA-SQLPQILGLTAS 416
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 437 QNEIVEEFRRGLVN-VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q +++ F+ N +++ATS+ +EG+D+ CNLV++++ S V IQ RGR R S
Sbjct: 682 QKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 741
Query: 496 YLLMVKSGDSTTQSRLENY 514
+L+ + + Y
Sbjct: 742 CILVTSKTEVVENEKCNRY 760
>gi|118352386|ref|XP_001009465.1| Type III restriction enzyme, res subunit family protein [Tetrahymena
thermophila]
gi|89291232|gb|EAR89220.1| Type III restriction enzyme, res subunit family protein [Tetrahymena
thermophila SB210]
Length = 2098
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 36/189 (19%)
Query: 23 RNYQLEALENALKQ--NTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
R+YQ E +N ++ N I+FLETG+GKTL++ M+ + Y L K FL +V L
Sbjct: 880 RDYQEEIFKNLIQNYGNYIIFLETGTGKTLVSQMIAQ---YTLSKFKGSKVAFLANQVNL 936
Query: 81 VPQQAEAI------------------KMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEV 122
V QQ +++ ++ + + G M +DFW+ + W++ + + ++
Sbjct: 937 VEQQYNNFLTYQRSIEEYLVKQNLSEEINQNINISFFHGKMNLDFWNRSFWQKNVEQSQI 996
Query: 123 LVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPR 182
+ + QI L+GLR +F+L L H+ R K + N P
Sbjct: 997 IFFSSQIFLNGLRRGHFQLTQHTKFYLFYNHNDRVKKNDIVL-------------KNTPN 1043
Query: 183 IFGMTASPI 191
I G++A+PI
Sbjct: 1044 IIGLSATPI 1052
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 432 QSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARM 491
Q +Q +IVE FR ++V+TS++EEG D+ SCN+VI F + +IQ +GRAR
Sbjct: 1344 QKYSEQQKIVERFRNKQFKILVSTSVVEEGFDIPSCNIVIAFSKIISQRQYIQMKGRARA 1403
Query: 492 QNSDYLLMV 500
+NS + +V
Sbjct: 1404 ENSKFYALV 1412
>gi|365902819|ref|ZP_09440642.1| ribonuclease III [Lactobacillus malefermentans KCTC 3548]
Length = 232
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 32/186 (17%)
Query: 1158 LNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
N F+D SLL EALT SY + E P + Y+R+EFLGDAV+ ++++ Y++ +YP L
Sbjct: 13 FNIVFKDESLLDEALTQASY-VNEHPNQNLKFYERIEFLGDAVMQFVVSEYIFKRYPQLP 71
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHI-LHASHELYKRINITVDSFEKLSLGSTFGW 1272
G LT +R+A VN + +A + + + +I L EL ++ E+ SL
Sbjct: 72 QGRLTRLRAAMVNEESFASFARECHFNDYIRLGKGEEL-------ANARERDSL------ 118
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCNREVVF--QSIRPLLEPMITPETMRFHPVRELT 1330
L DI ES GA+++D G + + F Q I P L+ + F EL
Sbjct: 119 ---------LCDIFESFVGAVYMDQGIKKVITFAEQVIYPKLDEGRFDDY--FDHKTELQ 167
Query: 1331 EYCQKN 1336
E QKN
Sbjct: 168 EMVQKN 173
>gi|146296620|ref|YP_001180391.1| ribonuclease III [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145410196|gb|ABP67200.1| Ribonuclease III [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 224
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 27/185 (14%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+E L Y F++P+LL ALTH S + CY+RLEFLGDAVL+ +++ YL+ +P LS
Sbjct: 4 IEKKLGYRFKNPNLLKLALTHKSATHDD-KSCYERLEFLGDAVLELVVSKYLFEHFPQLS 62
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
G LT++R+ V ++ + + L ++I+ +E + FE G +
Sbjct: 63 EGELTNLRATIVCSETLSKVAETLNLKRYIVFGKNE-------KKEGFE--------GNK 107
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI--TPETMRFHPVR-ELT 1330
S+ S D++E++ G IF++SG + + + + LLEP I E F+ + +L
Sbjct: 108 SIWS------DVLEAIFGGIFLESGFD--MAEKIVINLLEPFIKKAAEGKLFYDYKTKLQ 159
Query: 1331 EYCQK 1335
E+ Q+
Sbjct: 160 EFIQR 164
>gi|20385628|gb|AAM21359.1| melanoma differentiation associated gene 5-like protein [Mus
musculus]
Length = 1025
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 699 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 758
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 759 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 818
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 819 ARGRARADESTYVLVTSSGSGVTEREIVN 847
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S
Sbjct: 298 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASES 357
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 358 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 415
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 416 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 470
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 471 DLKKQNKPAIPLPQILGLTASP 492
>gi|257096036|ref|NP_082111.2| interferon-induced helicase C domain-containing protein 1 isoform 1
[Mus musculus]
gi|62510931|sp|Q8R5F7.1|IFIH1_MOUSE RecName: Full=Interferon-induced helicase C domain-containing
protein 1; AltName: Full=Helicase with 2 CARD domains;
Short=Helicard; AltName: Full=Interferon induced with
helicase C domain protein 1; AltName: Full=Melanoma
differentiation-associated protein 5; Short=MDA-5;
AltName: Full=RIG-I-like receptor 2; Short=RLR-2
gi|18698981|gb|AAL77205.1| HELICARD [Mus musculus]
gi|132252386|gb|ABO33313.1| melanoma differentiation-associated protein 5 [Mus musculus]
Length = 1025
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 699 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 758
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 759 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 818
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 819 ARGRARADESTYVLVTSSGSGVTEREIVN 847
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S
Sbjct: 298 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASES 357
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 358 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 415
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 416 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 470
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 471 DLKKQNKPAIPLPQILGLTASP 492
>gi|257096038|ref|NP_001157949.1| interferon-induced helicase C domain-containing protein 1 isoform 2
[Mus musculus]
Length = 976
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 650 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 709
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 710 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 769
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 770 ARGRARADESTYVLVTSSGSGVTEREIVN 798
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S
Sbjct: 249 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASES 308
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 309 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 366
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 367 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 421
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 422 DLKKQNKPAIPLPQILGLTASP 443
>gi|74225485|dbj|BAE31652.1| unnamed protein product [Mus musculus]
Length = 1025
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 699 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 758
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 759 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 818
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 819 ARGRARADESTYVLVTSSGSGVTEREIVN 847
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT A+ + + + ++ S
Sbjct: 298 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTREAVYITKDHLDKKKQASES 357
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 358 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 415
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 416 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 470
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 471 DLKKQNKPAIPLPQILGLTASP 492
>gi|51329784|gb|AAH80200.1| Ifih1 protein [Mus musculus]
Length = 976
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 650 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 709
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 710 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 769
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 770 ARGRARADESTYVLVTSSGSGVTEREIVN 798
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S
Sbjct: 249 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASES 308
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 309 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 366
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 367 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 421
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 422 DLKKQNKPAIPLPQILGLTASP 443
>gi|148695044|gb|EDL26991.1| interferon induced with helicase C domain 1 [Mus musculus]
Length = 1025
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 699 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 758
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 759 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 818
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 819 ARGRARADESTYVLVTSSGSGVTEREIVN 847
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S
Sbjct: 298 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASES 357
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 358 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 415
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 416 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 470
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 471 DLKKQNKPAIPLPQILGLTASP 492
>gi|365157110|ref|ZP_09353391.1| ribonuclease 3 [Bacillus smithii 7_3_47FAA]
gi|363625844|gb|EHL76855.1| ribonuclease 3 [Bacillus smithii 7_3_47FAA]
Length = 243
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 26/168 (15%)
Query: 1152 RHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYNK 1208
R L+ L F D SLL++A TH SY+ + +RLEFLGDAVL+ ++ YL+NK
Sbjct: 17 RQLQKKLEIDFHDQSLLMQAFTHSSYVNEHRKKPNDDNERLEFLGDAVLELTVSNYLFNK 76
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP +S G LT +R+A V C ++ S+EL I + E+L+ G
Sbjct: 77 YPFMSEGELTKLRAAVV---C----------EPSLVGFSNELQFGQYIRLGKGEELTGGR 123
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI 1316
T P L D+ E+ GA+++D G EVV Q + ++ P I
Sbjct: 124 T--------RPALLADVFEAFIGALYLDQGL--EVVVQFLEKIVFPKI 161
>gi|308466625|ref|XP_003095565.1| CRE-DRH-3 protein [Caenorhabditis remanei]
gi|308245160|gb|EFO89112.1| CRE-DRH-3 protein [Caenorhabditis remanei]
Length = 979
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSE--LLPRHCTWKTK-----YIAG-NNSGIQCQ 432
+++ D R IIFV + TA + L+E +L + T+ Y+ G NN+G Q
Sbjct: 590 QFKEQPDSRVIIFVTQRNTAQRVSEFLNESGILEQFLNTTTRQKTVGYVLGTNNTGSVQQ 649
Query: 433 SRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFD-PSRTVCSFIQSRGRARM 491
S ++Q ++E+F G + VIVATS++EEGLDV SCNL+I ++ S + +Q RGRAR
Sbjct: 650 SPQEQQRVLEQFNSGKLKVIVATSVVEEGLDVTSCNLIIKYNCSSASAIQLVQRRGRARA 709
Query: 492 QNSDYLLMVKSGDSTTQSRLENYLASGNKMRK 523
+NS +L+ + S Q+ N + S MR+
Sbjct: 710 KNSRSVLL--AVHSRVQNDESNAMLSEKFMRQ 739
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 34/205 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYL--LRKPSPF----VAVFLV 75
R YQ E ++ AL+ +N ++ TGSGKT +AI YA + + + F V +V
Sbjct: 210 RTYQEELVQTALEGKNCVIIAPTGSGKTEVAI-----YAAMKHISRREAFGEHSRVVLVV 264
Query: 76 PKVVLVPQQAEAIKMHTDLK--VGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDG 133
PK+ LV QQ E + + K V + G D +G ++++ ++VMTPQIL++
Sbjct: 265 PKIPLVTQQKERFLKYCNGKYVVNGFHGSEKSDSGEGR--RDDVLASHIVVMTPQILINM 322
Query: 134 L----RLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L R ++ ++I DE H+ G H Y + +R+++ + + P+I G+TAS
Sbjct: 323 LQSVRRNERLYVSDFSMMIFDEVHYTTGNHAYVNL-----NRIVQEWEYDKPQIIGLTAS 377
Query: 190 PIKSKVSSSEQDYWQKIHDLETLMN 214
V++S+Q D+ +++N
Sbjct: 378 L---NVNASQQT------DINSMLN 393
>gi|132252411|gb|ABO33314.1| melanoma differentiation-associated protein 5 [Mus musculus]
gi|158699346|gb|ABW76702.1| melanoma differentiation-associated protein 5 [Mus musculus]
Length = 1025
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 699 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 758
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 759 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 818
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 819 ARGRARADESTYVLVTSSGSGVTEREIVN 847
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 11 TEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPF 69
T+ VS + R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S
Sbjct: 298 TKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASES 357
Query: 70 VAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTP 127
V ++ V++ +Q + + LK K++ +G+ D ++ E + ++V++ T
Sbjct: 358 GKVIVLVNKVMLAEQLFRKEFNPYLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTA 415
Query: 128 QILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETG 176
QIL DG++LS F L +I+DECHH + Y IM + + L
Sbjct: 416 QILENSLLNLESGDDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLRNN 470
Query: 177 DSN--------LPRIFGMTASP 190
D LP+I G+TASP
Sbjct: 471 DLKKQNKPAIPLPQILGLTASP 492
>gi|345308281|ref|XP_001509166.2| PREDICTED: probable ATP-dependent RNA helicase DDX58
[Ornithorhynchus anatinus]
Length = 781
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 22 ARNYQLEALENAL-KQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + AL +NTI+ TG GKT +AIM+ +++ + VFLV KV +
Sbjct: 99 ARSYQMELAKPALVGKNTIICAPTGCGKTFVAIMICKNHLQNMPNGQRGKVVFLVTKVPV 158
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKH-EVLVMTPQILLDGLRLSYF 139
QQ + + G G G T E + K+ +++V+TPQIL++ L+
Sbjct: 159 YEQQKAVFIEQFERESYTVAGISGETA--GNTPVEHVIKNSDIIVLTPQILVNSLKNGTV 216
Query: 140 -KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L+M ++I DECH+ H Y IM + L T LP+I G+TAS
Sbjct: 217 PSLSMFTLMIFDECHNTDKSHPYNKIMINYLDNKLGTSACQLPQIVGLTAS 267
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 381 EYRGVEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQC--QSRKKQN 438
EY + R I+FV+ A L+ + E P+ K+ + G Q + Q
Sbjct: 477 EYHLNPESRTILFVKTRALANALKRWIEEN-PKLDYLKSDVLMGRGKRNQATGMTLPLQK 535
Query: 439 EIVEEFR-RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYL 497
+++E F+ G V++ATS+ +EG+D+ CN+VI+++ V IQ+RGR R ++S
Sbjct: 536 DVLETFKASGETKVLIATSVADEGIDIAQCNVVILYEYIGNVIKMIQTRGRGRAKDSKCF 595
Query: 498 LM 499
L+
Sbjct: 596 LV 597
>gi|13278456|gb|AAH04031.1| Ifih1 protein, partial [Mus musculus]
Length = 514
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 188 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 247
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 248 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 307
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 308 ARGRARADESTYVLVTSSGSGVTEREIVN 336
>gi|19343863|gb|AAH25508.1| Ifih1 protein [Mus musculus]
Length = 467
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 141 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAG 200
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 201 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 260
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 261 ARGRARADESTYVLVTSSGSGVTEREIVN 289
>gi|323489554|ref|ZP_08094781.1| ribonuclease 3 [Planococcus donghaensis MPA1U2]
gi|323396685|gb|EGA89504.1| ribonuclease 3 [Planococcus donghaensis MPA1U2]
Length = 251
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 24/156 (15%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYNKY 1209
L+ LN +F+ P+LL +A TH SY+ + + +RLEFLGDAVL+ ++ YLY KY
Sbjct: 25 QLQKELNITFKKPTLLYQAFTHSSYVNEHRRKQFTDNERLEFLGDAVLELSVSHYLYMKY 84
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P +S G LT +R+A V L + + G K+IL + E+L+ G T
Sbjct: 85 PEMSEGELTKLRAAIVCEPSLVLFANELGFGKYIL-------------LGKGEELTGGRT 131
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
P L D+ ES GA+++D G V F
Sbjct: 132 --------RPALLADVFESYIGALYLDQGLEPVVSF 159
>gi|88608789|ref|YP_506782.1| ribonuclease III [Neorickettsia sennetsu str. Miyayama]
gi|88600958|gb|ABD46426.1| ribonuclease III [Neorickettsia sennetsu str. Miyayama]
Length = 222
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 120/250 (48%), Gaps = 38/250 (15%)
Query: 1149 VNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITVYLY 1206
+ + L+SLL F++ LLVEALTH P + +C Y+RLEFLGDAVL+ +I LY
Sbjct: 1 MELEELQSLLGVYFKNKDLLVEALTH-----PSVEKCPSYERLEFLGDAVLNLVIASMLY 55
Query: 1207 NKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
+ +PG G L+ +SA + + A+ + + L +I +S E
Sbjct: 56 DLFPGDPEGRLSHRQSALICKNTLAMLARQMNLGDYIRLSSSE----------------- 98
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPV 1326
G TS L +++E+L GAIF+D+G F R + +++ +P
Sbjct: 99 -EAGGGRDKTS---NLENVLEALVGAIFLDAGLETVTCFIKKR-WYGLAVQSDSIEPNPK 153
Query: 1327 RELTEYCQKNHFSMKKPVASRI--SGKAAV---TVEVQANGRLFEHTFLDADKKTAKKVA 1381
L E Q MK P+ + I SG A + +E++ +G+ T KK ++ A
Sbjct: 154 STLQELLQAK--GMKPPIYNVINRSGPAHLPIFEIEIRVDGKKRRAT--GKSKKLGEENA 209
Query: 1382 CKEVLKSLRA 1391
+ +L+ L+A
Sbjct: 210 ARMMLEELKA 219
>gi|74142317|dbj|BAE31920.1| unnamed protein product [Mus musculus]
Length = 444
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
Query: 369 TEKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--A 423
EK++ L ++LE R E R IIF + R T + Q ++ K ++ A
Sbjct: 117 NEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGA 176
Query: 424 GNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFI 483
G++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +
Sbjct: 177 GHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMV 236
Query: 484 QSRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
Q+RGRAR S Y+L+ SG T+ + N
Sbjct: 237 QARGRARADESTYVLVTSSGSGVTEREIVN 266
>gi|333923291|ref|YP_004496871.1| ribonuclease 3 [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333748852|gb|AEF93959.1| Ribonuclease 3 [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 246
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 110/241 (45%), Gaps = 36/241 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYN 1207
V L++ + + + +PSLL +ALTH S + + QRLEFLGDAVL+ LI+ YLY
Sbjct: 8 VNRLKAKIGFEWSNPSLLTQALTHSSCVHESRGQGLHHNQRLEFLGDAVLELLISEYLYQ 67
Query: 1208 KYPGLSPGYLTDMRSASVNNDCY-ALSSVKHGLHKHILHASHELYKRINITVDSFEKLSL 1266
++P + G LT MR+ASV C +L+ V GL D L +
Sbjct: 68 RFPDRTEGELTKMRAASV---CEPSLAKVARGL-------------------DLGRCLRM 105
Query: 1267 GSTFGWESVTSFPKALGDIIESLAGAIFVDSG--CNREVVFQSIRPLLEPMITPETMRFH 1324
G P L D E+L GAI++D G R V + + P++ ++ R +
Sbjct: 106 GRGEERSGGRERPSILADAFEALLGAIYLDHGLEAARRFVLEQLNPIITDVVAGRLDRDY 165
Query: 1325 PVRELTEYCQKNHFSMKKPVASRISG-------KAAVTVEVQANGRLFEHTFLDADKKTA 1377
EL E Q+N V + +G A V Q G+ H+ +A+++ A
Sbjct: 166 KT-ELQERLQQNSPDPVSYVIMKETGPDHDKVFTAGVIYRGQIIGQGSGHSKKEAEQQAA 224
Query: 1378 K 1378
K
Sbjct: 225 K 225
>gi|157822253|ref|NP_001102669.1| interferon-induced helicase C domain-containing protein 1 [Rattus
norvegicus]
gi|149022117|gb|EDL79011.1| similar to HELICARD (predicted) [Rattus norvegicus]
Length = 1027
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 701 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLIGAG 760
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 761 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 820
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 821 ARGRARADESTYVLVTSSGSGVTEREIVN 849
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 29/190 (15%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ V ++ V++
Sbjct: 311 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQACESGKVIVLVNKVML 370
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTPQILL-------- 131
+Q + + LK K++ +G+ D ++ E + ++V++ T QIL
Sbjct: 371 AEQLFRKEFNPFLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLES 428
Query: 132 ---DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY------HRLLETGDS--NL 180
DG++LS F L +I+DECHH + Y IM + H+L + +L
Sbjct: 429 GEDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLKNHKLKKQNKPTIHL 483
Query: 181 PRIFGMTASP 190
P+I G+TASP
Sbjct: 484 PQILGLTASP 493
>gi|385810564|ref|YP_005846960.1| dsRNA-specific ribonuclease [Ignavibacterium album JCM 16511]
gi|383802612|gb|AFH49692.1| dsRNA-specific ribonuclease [Ignavibacterium album JCM 16511]
Length = 258
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 34/195 (17%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPG 1211
LE ++ Y +D S ++AL H S++ L E +RLEFLGDAVL + YL++ YP
Sbjct: 35 LEKIIGYPIKDQSHYIQALIHRSFLEELDEDDASNERLEFLGDAVLSLITAEYLFHLYPD 94
Query: 1212 LSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFG 1271
G+LT +R+ VN + A S+ + GL K +L IN +L +TF
Sbjct: 95 KDEGFLTKVRAKIVNRNSLADSAEEIGLVKFLL---------IN--------QNLSNTFS 137
Query: 1272 WESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRP-LLEPMITPETMRFHPVRE-- 1328
+ T L D E+L GA+++D G + VF IR L++P++ H V E
Sbjct: 138 RGAKT----VLSDAFEALVGALYLDQGLDAGRVF--IRKVLIDPIVEAGE---HLVDENY 188
Query: 1329 ---LTEYCQKNHFSM 1340
L EY Q N +
Sbjct: 189 KSQLLEYAQANKLEL 203
>gi|197246579|gb|AAI68680.1| Ifih1 protein [Rattus norvegicus]
Length = 775
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVE-RVITAIVLQSLLSELLPRHCTWKTKYI--AG 424
EK++ L ++LE R E R IIF + R T + Q ++ K ++ AG
Sbjct: 449 EKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLIGAG 508
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 509 HSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 568
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 569 ARGRARADESTYVLVTSSGSGVTEREIVN 597
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 29/190 (15%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ V ++ V++
Sbjct: 59 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQACESGKVIVLVNKVML 118
Query: 82 PQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTPQILL-------- 131
+Q + + LK K++ +G+ D ++ E + ++V++ T QIL
Sbjct: 119 AEQLFRKEFNPFLK--KWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLES 176
Query: 132 ---DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY------HRLLETGDS--NL 180
DG++LS F L +I+DECHH + Y IM + H+L + +L
Sbjct: 177 GEDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYLKQKLKNHKLKKQNKPTIHL 231
Query: 181 PRIFGMTASP 190
P+I G+TASP
Sbjct: 232 PQILGLTASP 241
>gi|312869965|ref|ZP_07730104.1| ribonuclease III [Lactobacillus oris PB013-T2-3]
gi|417886270|ref|ZP_12530417.1| ribonuclease III [Lactobacillus oris F0423]
gi|311094550|gb|EFQ52855.1| ribonuclease III [Lactobacillus oris PB013-T2-3]
gi|341593768|gb|EGS36593.1| ribonuclease III [Lactobacillus oris F0423]
Length = 232
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 113/249 (45%), Gaps = 36/249 (14%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIP----RCYQRLEFLGDAVLDYLITVYLYNK 1208
+L + F DP LL EA T SY + E P + Y+R+EFLGDAVL+ +++ Y+Y +
Sbjct: 8 YLAKEFDIHFSDPRLLAEAFTQASY-VNEHPHQNLKFYERIEFLGDAVLELIVSEYIYKR 66
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP L G LT +R+A V D ++ K H D + +L G
Sbjct: 67 YPELPQGKLTRLRAAMVCEDSFS----KFAKECHF---------------DQYIRLGHGE 107
Query: 1269 TFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMITPETMRFHPVR- 1327
P L DI ES GA+++D G R V + +R ++ P + H V
Sbjct: 108 ELA--GARQRPGLLCDIFESFVGALYLDQG--RPAVEKFVRRVIFPKLDMGWFD-HAVDA 162
Query: 1328 --ELTEYCQKNHFSMKKPVASRISG---KAAVTVEVQANGRLFEHTFLDADKKTAKKVAC 1382
L E+ Q++ + + SG A V+V ANG++ + KK A+ A
Sbjct: 163 KTSLQEFLQRDGDVLIEYHLLEESGTENNPAFHVDVAANGQVIADG-QGSSKKQAEMQAA 221
Query: 1383 KEVLKSLRA 1391
+ LK LRA
Sbjct: 222 QRALKKLRA 230
>gi|14475571|emb|CAC41975.1| putative RNA dependent RNA polymerase [Dictyostelium discoideum]
Length = 1964
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 386 EDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFR 445
+D+R ++FVE A L S+L + P TK + G+N G +KQ I+ +FR
Sbjct: 198 KDLRILVFVETRSGASNLTSMLKKE-PFQEYLHTKRLVGHN-GDDGMDSEKQQSIIRKFR 255
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
G +IV T++LEEG+DVQ CN+VI +D ++ S IQ RGRAR +N +++ + D
Sbjct: 256 DGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLIQRRGRARSKNESKFIIIYNDDK 315
Query: 506 TTQSRLENYLASGNKMRKEV 525
++ N L+S N + +
Sbjct: 316 DL--KILNILSSENLLNNSI 333
>gi|307105763|gb|EFN54011.1| hypothetical protein CHLNCDRAFT_58365 [Chlorella variabilis]
Length = 1346
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 23 RNYQLEALE-NALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ A+ A +N IV +TGSGKT+IA+ R+ L PS VFL P V LV
Sbjct: 684 RGYQQRAVTLAATGRNMIVVGDTGSGKTVIAVA--RAVDMTLADPSART-VFLAPTVQLV 740
Query: 82 PQQAEAIKMHTDLKVG--KYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYF 139
QQ + G + G + W+ + + V+VMTPQ+ L+ L
Sbjct: 741 QQQTAVFLSYPSFSSGALRATGRTSDNPVAPRDWQRLLEDNHVVVMTPQLFLNMLNAGAA 800
Query: 140 KLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKVSSSE 199
+ I +L++DECHHA+ H +M ++R + ++ G+TASP S
Sbjct: 801 HFHQISLLVVDECHHAQADHPVNKVMR--HNR----SSARTTQVLGLTASPAS---RDSL 851
Query: 200 QDYWQKIHDLETLMNSKVYTC-ASESVLSNFIP 231
Q +H LE +++++Y S+ L +P
Sbjct: 852 DATLQALHQLELNLDAQLYVVDESDEELRAAVP 884
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 366 GLLTE--KIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSE-------------L 410
GLL+ K L + LLEYRG + I+F L L+S+ L
Sbjct: 1024 GLLSRHPKFEALRDFLLEYRGADTFHGIVFCRTREAVRSLARLISDTPDLQFVEASRALL 1083
Query: 411 LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
+ R + AG+ G + K+Q +E FR+ ++V+TS EEG+DV C V
Sbjct: 1084 VYRFMGHGNRRGAGSGGGGGGMTSKEQRAAMEAFRQPGCRLLVSTSAGEEGIDVPRCEFV 1143
Query: 471 IMFDPSRTVCSFIQSRGRARMQNSDYLLMVK 501
+ + ++T +QS GRAR S ++ +V+
Sbjct: 1144 VRYSAAQTGRERVQSAGRARKLGSRFVEIVE 1174
>gi|86990300|dbj|BAE79254.1| endoribonuclease Dicer [Mesocricetus auratus]
Length = 132
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 50 LIAIMLLRSYAYLLR---KPSPFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGVD 106
IA++L + A+ +R P VFLV V QQ A++ H+DLKVG+Y ++ V+
Sbjct: 1 FIAVLLTKELAHQIRGDLNPRAKRTVFLVNSANQVAQQVSAVRTHSDLKVGEY-SNLEVN 59
Query: 107 F-WDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIM 165
W W +E +KH+VL+MT + L+ L+ Y L+ I +L+ DECH A H Y IM
Sbjct: 60 ASWTKERWSQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIM 119
Query: 166 TEFYHRLLETGDSNLPRIF 184
+L E+ S PRI
Sbjct: 120 -----KLCESCPS-CPRIL 132
>gi|456012685|gb|EMF46373.1| Ribonuclease III [Planococcus halocryophilus Or1]
Length = 251
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 24/156 (15%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY---QRLEFLGDAVLDYLITVYLYNKY 1209
L+ LN +F P+LL +A TH SY+ + + +RLEFLGDAVL+ ++ YLY KY
Sbjct: 25 QLQKELNITFNKPTLLYQAFTHSSYVNEHRRKQFTDNERLEFLGDAVLELSVSHYLYMKY 84
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P +S G LT +R+A V L + + G K+IL + E+L+ G T
Sbjct: 85 PEMSEGELTKLRAAIVCEPSLVLFANELGFGKYIL-------------LGKGEELTGGRT 131
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVF 1305
P L D+ ES GA+++D G V F
Sbjct: 132 --------RPALLADVFESYIGALYLDQGLEPVVAF 159
>gi|321456672|gb|EFX67773.1| hypothetical protein DAPPUDRAFT_115150 [Daphnia pulex]
Length = 228
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 33/187 (17%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYP 1210
+ +E + Y F++ LL++A+TH SY + Y E++GD VL + + K+
Sbjct: 26 LEEVEKTIGYIFKNKLLLIQAMTHSSYKNNCLTESYNEQEWIGDRVLGFEMA-----KFV 80
Query: 1211 GLSPGYLTDMRSAS----VNNDCYALSSVKHGLHKHILHASHELYKRINITVDS------ 1260
L+ D +SA+ +N+ +A+ +V+HG+HKHI + L +I+ +
Sbjct: 81 SLNCQDTVDAKSATFATLTSNEFWAVLTVRHGIHKHIKLCDNNLTAKIDAFAEQQTRNGH 140
Query: 1261 ------FEKLS-------LGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQS 1307
FE + L +TF T PK L D+ E+LAGAIF DSG + ++ +
Sbjct: 141 QHMHKFFEIVESVDDPELLFATF-----TEPPKELADVWEALAGAIFQDSGFSNDITWAV 195
Query: 1308 IRPLLEP 1314
I PLL P
Sbjct: 196 IAPLLVP 202
>gi|326922819|ref|XP_003207642.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Meleagris gallopavo]
Length = 1001
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 369 TEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVL-QSLLSELLPRHCTWKTKYI--AG 424
EK++ L +L+E + E+ R IIF + +A+ L ++ K Y+ AG
Sbjct: 673 NEKLMKLRNTLMEEFTKTEESRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHYLIGAG 732
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
+NS + ++ +Q E++++FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 733 HNSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 792
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
+RGRAR S Y L+ SG + N N M K + +P
Sbjct: 793 ARGRARADESTYALVASSGSGAVEREDVNIFRE-NMMYKAIQRVQEMP 839
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 3 PVSMESDTTEEVSADTLP--FARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSY 59
P S + E A P R+YQ+E + AL +N I+ L TGSGKT +A+ + + +
Sbjct: 280 PTSDSGEDEAEGRASPEPDLILRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDH 339
Query: 60 AYLLRKPS-PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEE 116
+K S P + LV KV LV Q ++ + + +++ +G+ D ++ E
Sbjct: 340 LDKKKKASEPGKVIVLVNKVPLVEQH---LRKEFNPFLKRWYQVIGLSGDSELKISFPEV 396
Query: 117 MSKHEVLVMTPQILL----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMT 166
+ +++V++ T QIL +G+ LS F L +I+DECHH + + Y IM
Sbjct: 397 VKRNDVIICTAQILENSLLNATEEDEGVHLSDFSL-----MIIDECHHTQKEGVYNNIMR 451
Query: 167 EFYHRLLETGDSN--------LPRIFGMTASP 190
+ ++ P+I G+TASP
Sbjct: 452 RYLKDKIKNRKQAKENKPLIPQPQILGLTASP 483
>gi|152993835|ref|YP_001359556.1| ribonuclease III [Sulfurovum sp. NBC37-1]
gi|189043369|sp|A6QCJ0.1|RNC_SULNB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|151425696|dbj|BAF73199.1| ribonuclease III [Sulfurovum sp. NBC37-1]
Length = 223
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 31/189 (16%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
LE LNY+F+D L++EALTH SY + P +RLEFLGDAVLD ++ YL+ K+P
Sbjct: 6 QLEKRLNYTFKDKQLIIEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEYLFKKFPKS 62
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGW 1272
G L+ +R++ VN + L L ++I++ + L+ + G
Sbjct: 63 DEGILSKIRASLVNESGFTL-----------------LARKIDLGSYIYLSLAEENNNGR 105
Query: 1273 ESVTSFPKALGDIIESLAGAIFVDSGCN--REVVFQSIRPLLE--PMITPETMRFHPVRE 1328
+ P L + E++ GA+++++G + +E+ SI+ L E P I +++
Sbjct: 106 DK----PSLLSNAFEAIIGAVYLEAGLDTAKEI---SIKLLEECHPKIDLQSLSKDYKTA 158
Query: 1329 LTEYCQKNH 1337
L E Q H
Sbjct: 159 LQELTQATH 167
>gi|395238267|ref|ZP_10416204.1| Ribonuclease III [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477839|emb|CCI86181.1| Ribonuclease III [Lactobacillus gigeriorum CRBIP 24.85]
Length = 227
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNK 1208
++ L+ +F++ LL EA TH SY P+ R Y++LEFLGDAVL+ I+ YLY
Sbjct: 7 IKRLDQKYGITFKNIELLEEAFTHSSYANEHPDQARDYEKLEFLGDAVLELAISDYLYRH 66
Query: 1209 YPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGS 1268
YP L+ G LT MRS V + ++ +++ G I +LG
Sbjct: 67 YPNLNEGELTRMRSNIVRTEGFSEFAIECGFQNEI---------------------NLGK 105
Query: 1269 TFGWESVTSFPKA--LGDIIESLAGAIFVDSGCN--REVVFQSIRPLLEPMITPETMRFH 1324
G E S + L D+ E+ GA+F+D G + + ++ PL++ ++ +
Sbjct: 106 --GEEKAGSRSRKTLLEDVFEAFNGALFLDQGLKAVQHFLHLTVYPLIDSGEFDDSRDYK 163
Query: 1325 PVRELTEYCQKNH-FSMKKPVASRISGKAAVTVEVQANGRL 1364
+L E Q+N +++ S + VE++ NG L
Sbjct: 164 T--DLQELLQQNGPVNIEYTTISESQAPSHFVVELKVNGEL 202
>gi|428775122|ref|YP_007166909.1| RNAse III [Halothece sp. PCC 7418]
gi|428689401|gb|AFZ42695.1| RNAse III [Halothece sp. PCC 7418]
Length = 228
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 1162 FRDPSLLVEALTHGSYM--LPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTD 1219
F+D L A TH SY PE+ +RLEFLGDAVL +L+ LY KYP + G L+
Sbjct: 8 FKDIQLWETACTHRSYFNEHPEVQEDNERLEFLGDAVLGFLVGKLLYQKYPQMREGELSR 67
Query: 1220 MRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWESVTSFP 1279
+RS VNN+ H+L + ++++ + L LG E P
Sbjct: 68 LRSRLVNNE-------------------HQLAE-FALSLNLDQHLRLGKGAEKEGTRQNP 107
Query: 1280 KALGDIIESLAGAIFVDSGCNREVVFQSIRPLL----EPMITPETMRFHPVRELTE---- 1331
L D +E++ GA F+D+G E V Q I PL E + + + +L E
Sbjct: 108 DVLSDTLEAVIGAYFLDAGI--EAVEQFIEPLFSAIAEQVTATSELDQNYKGQLQEWALA 165
Query: 1332 YCQK-NHFSMKKPVASRISGKAAVTVEVQANGRLFEHTFLDADKKTAKKVACKEVLKSLR 1390
YC +S+++ + + + TVEV+ ++ + KKTA+K A K L++
Sbjct: 166 YCGLIPRYSIRQETGADHAKE--FTVEVRIGSEVY-GVGVGESKKTAEKRAAKAALEAQN 222
Query: 1391 AS 1392
A+
Sbjct: 223 AA 224
>gi|373857288|ref|ZP_09600030.1| ribonuclease III [Bacillus sp. 1NLA3E]
gi|372452938|gb|EHP26407.1| ribonuclease III [Bacillus sp. 1NLA3E]
Length = 260
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 26/183 (14%)
Query: 1138 QRQFQVHAERLVNVRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQ---RLEFLGD 1194
+R+ +++ + + + +S L + F+D +LL +A TH SY+ + Y+ RLEFLGD
Sbjct: 7 EREIKLNRAKEMQFKEFQSRLGFEFQDSNLLKQAFTHSSYVNEHRKKPYEDNERLEFLGD 66
Query: 1195 AVLDYLITVYLYNKYPGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRI 1254
AVL+ ++ +LY KYP +S G LT +R+A V C ++ ++EL+
Sbjct: 67 AVLELTVSQFLYKKYPLMSEGELTKLRAAVV---C----------EPSLVFFANELFFGQ 113
Query: 1255 NITVDSFEKLSLGSTFGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEP 1314
+ + E+L+ G + P L D+ E+ GA+++D G + VV + + ++ P
Sbjct: 114 LVLLGKGEELTGGR--------ARPALLADVFEAFIGALYLDKGID--VVIEFLEKIVFP 163
Query: 1315 MIT 1317
I
Sbjct: 164 KIN 166
>gi|33772149|gb|AAQ54511.1| DEAD/DEAH box helicase factory [Malus x domestica]
Length = 70
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 121 EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNL 180
+VLVMT QILL+ LR S K+ I +LILDECHHA KH Y+ +M+EFYH T
Sbjct: 4 QVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTPKEKR 60
Query: 181 PRIFGMTASP 190
P +FGMTASP
Sbjct: 61 PSVFGMTASP 70
>gi|145517933|ref|XP_001444844.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830355|emb|CAI39054.1| Ribonuclease with two RNaseIII domains [Paramecium tetraurelia]
gi|124412277|emb|CAK77447.1| unnamed protein product [Paramecium tetraurelia]
Length = 632
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 127/325 (39%), Gaps = 69/325 (21%)
Query: 983 EAITTKKCQEDFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCK 1042
EAI T + E+LE LGDS LKY + +FK Y+ EG ++ + R+I N L +
Sbjct: 346 EAIVTSSFNFKRNYENLEVLGDSVLKYVITADIFKQYKLLDEGEMTSLRSRLIMNTFLAQ 405
Query: 1043 LGCEQKLPGFIRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADV 1102
L + L FI + K P N I + K+++ AD+
Sbjct: 406 LFEQLGLEQFIINQDLHFKQIKNPLVND---------------IISSENKQLQISQKADI 450
Query: 1103 VEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSF 1162
EA+IG T I + R + +F Y+ + + ++ + +Y F
Sbjct: 451 YEAIIGGVFETTQSLYEYITILR---RTNFPISIYKDILFDYEPITAQIEQID-IRDYKF 506
Query: 1163 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLY-------NKYPG--LS 1213
+P L A+ P+ Y RLEFLGDA ++ L+ Y + K P L+
Sbjct: 507 NNPQLYEIAIN---------PQYYDRLEFLGDAAIELLVISYAFRVAREKQQKNPNWSLN 557
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
PG L+ + + N ++K GL
Sbjct: 558 PGLLSTWKQYLLGNKFMGEQTIKMGLKPQ------------------------------- 586
Query: 1274 SVTSFPKALGDIIESLAGAIFVDSG 1298
V PK GDI +S+A AI +DSG
Sbjct: 587 -VNEIPKLYGDIFQSVAAAILLDSG 610
Score = 46.6 bits (109), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 1154 LESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLS 1213
+ES+LNY + EA+ S+ R Y+ LE LGD+VL Y+IT ++ +Y L
Sbjct: 335 VESILNYQVPE-----EAIVTSSF---NFKRNYENLEVLGDSVLKYVITADIFKQYKLLD 386
Query: 1214 PGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGSTFGWE 1273
G +T +RS + N A + GL + I++ + N V+
Sbjct: 387 EGEMTSLRSRLIMNTFLAQLFEQLGLEQFIINQDLHFKQIKNPLVNDI------------ 434
Query: 1274 SVTSFPKAL-----GDIIESLAGAIF 1294
++S K L DI E++ G +F
Sbjct: 435 -ISSENKQLQISQKADIYEAIIGGVF 459
>gi|357518351|ref|XP_003629464.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355523486|gb|AET03940.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 67
Score = 80.5 bits (197), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 47/64 (73%)
Query: 1104 EALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYQRQFQVHAERLVNVRHLESLLNYSFR 1163
EALIGAFLS GGE L+++D IGIKV+ PY+RQF + L+ V +LESLLNYSFR
Sbjct: 4 EALIGAFLSAGGEMAALLYMDWIGIKVNINITPYERQFNACPDNLIIVSYLESLLNYSFR 63
Query: 1164 DPSL 1167
D SL
Sbjct: 64 DRSL 67
>gi|258567594|ref|XP_002584541.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905987|gb|EEP80388.1| predicted protein [Uncinocarpus reesii 1704]
Length = 217
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
R YQLE E A N I L+TG I I F F V LV
Sbjct: 98 REYQLELFEKAKTNNIIAVLDTG-----ITIAF-------------FSPCFFV---TLVF 136
Query: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
QQA ++ D K+ K+ G M WDG TW + ++ + V+V T ++L L S+ K+
Sbjct: 137 QQAAVLQNQIDQKIDKFCGAMETHLWDGETWAKHLANNMVIVCTAEVLHQCLLHSFVKME 196
Query: 143 MIKVLILDECHHARGKHQYA 162
I +LI DE HHA+ H YA
Sbjct: 197 NINLLIFDEAHHAKKDHPYA 216
>gi|449514052|ref|XP_002194560.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Taeniopygia
guttata]
Length = 927
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Query: 22 ARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVL 80
AR+YQ+E + A+ +NT++ TGSGKT +A+++ + + VFL K+ +
Sbjct: 245 ARSYQIELAQPAIDGKNTLICAPTGSGKTFVAVLICEHHFQNIPSGRKAKVVFLATKMPV 304
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFK 140
QQ + H + + G + + + + + + +++V+TPQIL++ +
Sbjct: 305 YEQQKNVFRQHFE-RSGYFVQGICGETVANISVENVIQDSDIIVLTPQILVNIMDKGILS 363
Query: 141 -LNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTAS 189
L++ ++I DECH+ G H Y +MT + + ++ LP+I G+TAS
Sbjct: 364 SLSIFTLMIFDECHNTAGNHPYNVLMTRYLDQKFDSSAKQLPQIVGLTAS 413
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 437 QNEIVEEFRRGL-VNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSD 495
Q +++ FR + +++ATS+ +EG+D+ CNLV++++ V IQ RGR R ++S
Sbjct: 679 QKGVLDAFRNDKDIRLLIATSVADEGIDITECNLVVLYEYFGNVTKMIQVRGRGRAKDSK 738
Query: 496 YLLMVKSGDSTTQSRLENY 514
+L+ + +L Y
Sbjct: 739 CILVTSKTEVVENEKLNTY 757
>gi|50897087|dbj|BAD34724.1| Dicer-related RNase III protein Dcl1p [Tetrahymena thermophila]
Length = 1275
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
Query: 1139 RQF-QVHAERL-VNVRHLESLLNYSFRDPSLLVEALT-HGSYMLPEIPRCYQRLEFLGDA 1195
R+F Q+H + L + + E +LNY+F+D SLL++AL H + + YQ LEFLGDA
Sbjct: 997 RKFKQLHEQTLDIAISGFEKILNYTFKDKSLLIKALNCHSNSNFEHYFQDYQILEFLGDA 1056
Query: 1196 VLDYLITVYLY----NKYPGL-SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL 1250
+++ L+ + Y N+ + SP + +M+S ++ND + ++ + H + L+ S
Sbjct: 1057 LIEILVVSHGYHISRNRQKKINSPYFFCEMKSLLLSNDFMSRMAILNKFHYYALNISK-- 1114
Query: 1251 YKRINITVDSFEKLSLGSTFGWESVT---SFPKALGDIIESLAGAIFVDSG 1298
Y++ I + E +L + F ESV+ + PK LGD+ ES+AGAI +DS
Sbjct: 1115 YQQDEI-IQFIEDCNLNTKFK-ESVSHQANSPKVLGDLWESVAGAIIMDSD 1163
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 1164 DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSA 1223
D LL+E+ + SY + + LE +GD V+ Y+ ++YLY P S LT +R+
Sbjct: 732 DLELLIESFSQISY---SKTKNLELLEVIGDVVIKYISSLYLYLHLPNQSENALTMIRTI 788
Query: 1224 SVNNDCYALSSVKHGLHKHILHASHELYK-RINI-TVDSFEKLSLGSTFGWESVTSFPKA 1281
+NN +S+ ++GL ++ Y R N+ ++SF + ++ S
Sbjct: 789 FINNKYLGISAFRNGLQFYVQTKRPSSYDWRFNLFNLNSFTEAPQDQKQSFQLSYS---N 845
Query: 1282 LGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
L D +ES+ G + + Q I+ L
Sbjct: 846 LSDTLESVVGCFYASNQFTLNTCIQLIKDL 875
>gi|345875651|ref|ZP_08827442.1| ribonuclease III [Neisseria weaveri LMG 5135]
gi|417958288|ref|ZP_12601203.1| ribonuclease III [Neisseria weaveri ATCC 51223]
gi|343966946|gb|EGV35197.1| ribonuclease III [Neisseria weaveri ATCC 51223]
gi|343968726|gb|EGV36950.1| ribonuclease III [Neisseria weaveri LMG 5135]
Length = 239
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Query: 1153 HLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGL 1212
H++ L YSFR+ LLV+ALTH SY + +RLEF+GDAVLDY + L++ +P L
Sbjct: 13 HIQKKLGYSFRNTELLVQALTHRSYS----AKNNERLEFIGDAVLDYTVAKMLFDAFPKL 68
Query: 1213 SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHEL----YKRINITVDSFEKL 1264
S G L+ +RS VN A +++ + + + + EL ++R +I D+ E L
Sbjct: 69 SEGELSRLRSNLVNEAVLADIAIEMNIGEALFLGTGELKSGGFRRPSILADAVEAL 124
>gi|449267492|gb|EMC78435.1| putative ATP-dependent RNA helicase DHX58 [Columba livia]
Length = 674
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLV 81
R YQ EA+ AL+ N+IV+L TG+GKT A+ + R + L + VAV LV KV LV
Sbjct: 4 RGYQREAVTPALRGHNSIVWLPTGAGKTRAAVYVCRQH--LESRRGGRVAV-LVNKVHLV 60
Query: 82 PQQA--EAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQIL----LDGLR 135
Q A E + D +V GD + + K+ ++++ T QIL + G
Sbjct: 61 EQHAKKEFNVLQKDFRVTAISGDRSEKSFFASVVKQS----DIVICTAQILQNALVSGEE 116
Query: 136 LSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHRLLETGDSNLPRIFGMTASPIKSKV 195
++ +L +L++DECHH + Y IM + R L G +LP++ G+TASP
Sbjct: 117 DTHVELTDFSLLVIDECHHTHKEAVYNKIMLSYLQRKL-CGQQDLPQVLGLTASPGTGGA 175
Query: 196 SSSE 199
+S E
Sbjct: 176 TSFE 179
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 389 RCIIFVERVITAIVLQSLLSE---LLPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFR 445
R I+F + +A L S L + L H AG ++ + ++ +Q ++++ FR
Sbjct: 367 RGIVFTKTRQSAHSLLSWLQDTAALRGEHIRAAVLTGAGYSNQTRHMTQNEQQDVIKLFR 426
Query: 446 RGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDS 505
G +N++ +TS+ EEGLD+ CN+V+ + + +Q+RGRAR +NS Y ++ K+
Sbjct: 427 EGALNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQARGRARAENSVYSVLAKANSR 486
Query: 506 TTQSRLEN 513
L N
Sbjct: 487 EVSRELLN 494
>gi|332981630|ref|YP_004463071.1| ribonuclease III [Mahella australiensis 50-1 BON]
gi|332699308|gb|AEE96249.1| ribonuclease III [Mahella australiensis 50-1 BON]
Length = 228
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 111/241 (46%), Gaps = 34/241 (14%)
Query: 1151 VRHLESLLNYSFRDPSLLVEALTHGSYMLPEIPRCY-QRLEFLGDAVLDYLITVYLYNKY 1209
++ L LL Y F D + L EALTH SY Y +RLE LGD+VL+ +IT YL+ Y
Sbjct: 4 LKELMDLLGYRFNDINKLDEALTHSSYAYEHGLDYYNERLELLGDSVLNIIITDYLFVTY 63
Query: 1210 PGLSPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHELYKRINITVDSFEKLSLGST 1269
P LS G L+ +RS V+ + L ++L + EKLS G
Sbjct: 64 PELSEGNLSKLRSNIVSEKPLYKVAAAMNLGSYLL-------------LSRGEKLSHGDM 110
Query: 1270 FGWESVTSFPKALGDIIESLAGAIFVDSGCNREVVFQSIRPLLEPMI--TPETMRFHPVR 1327
P L D +E++ GA+++D G + VF + LL P+I T F+ +
Sbjct: 111 --------RPSTLADTVEAIIGAVYLDGGFDAAKVF--VLSLLAPIIEETAAISNFNDYK 160
Query: 1328 -ELTEYCQKNHFSMKKPVASRISGK-------AAVTVEVQANGRLFEHTFLDADKKTAKK 1379
EL E Q + +S K R G A V V+ + GR + DA++K A++
Sbjct: 161 SELQERLQIDGYSDIKYEIIREEGPDHDKMFFAEVKVDGKPVGRGSGRSKKDAEQKAAQQ 220
Query: 1380 V 1380
Sbjct: 221 A 221
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 28/131 (21%)
Query: 993 DFHLESLETLGDSFLKYAASQQLFKTYQNNHEGLLSVKKERIISNAALCKLGCEQKLPGF 1052
D++ E LE LGDS L + LF TY EG LS + I+S L K+ L
Sbjct: 37 DYYNERLELLGDSVLNIIITDYLFVTYPELSEGNLSKLRSNIVSEKPLYKVAAAMNL--- 93
Query: 1053 IRTESFDPKMWIIPGDNSGSYELNDDSLFNGRKIYVTGRKKVKSKTVADVVEALIGAFLS 1112
GSY L L G K+ ++ T+AD VEA+IGA
Sbjct: 94 ------------------GSYLL----LSRGEKL---SHGDMRPSTLADTVEAIIGAVYL 128
Query: 1113 TGGENVGLIFL 1123
GG + +F+
Sbjct: 129 DGGFDAAKVFV 139
>gi|118370147|ref|XP_001018276.1| Dicer-related RNase III protein Dcr1p, putative [Tetrahymena
thermophila]
gi|89300043|gb|EAR98031.1| Dicer-related RNase III protein Dcr1p, putative [Tetrahymena
thermophila SB210]
Length = 1903
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 14/171 (8%)
Query: 1137 YQRQFQVHAERL-VNVRHLESLLNYSFRDPSLLVEALT-HGSYMLPEIPRCYQRLEFLGD 1194
Y++ Q+H + L + + E +LNY+F+D SLL++AL H + + YQ LEFLGD
Sbjct: 1624 YRKFKQLHEQTLDIAISGFEKILNYTFKDKSLLIKALNCHSNSNFEHYFQDYQILEFLGD 1683
Query: 1195 AVLDYLITVYLY----NKYPGL-SPGYLTDMRSASVNNDCYALSSVKHGLHKHILHASHE 1249
A+++ L+ + Y N+ + SP + +M+S ++ND + ++ + H + L+ S
Sbjct: 1684 ALIEILVVSHGYHISRNRQKKINSPYFFCEMKSLLLSNDFMSRMAILNKFHYYALNISK- 1742
Query: 1250 LYKRINITVDSFEKLSLGSTFGWESVT---SFPKALGDIIESLAGAIFVDS 1297
Y++ I + E +L + F ESV+ + PK LGD+ ES+AGAI +DS
Sbjct: 1743 -YQQDEI-IQFIEDCNLNTKFK-ESVSHQANSPKVLGDLWESVAGAIIMDS 1790
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 1164 DPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITVYLYNKYPGLSPGYLTDMRSA 1223
D LL+E+ + SY + + LE +GD V+ Y+ ++YLY P S LT +R+
Sbjct: 1360 DLELLIESFSQISY---SKTKNLELLEVIGDVVIKYISSLYLYLHLPNQSENALTMIRTI 1416
Query: 1224 SVNNDCYALSSVKHGLHKHILHASHELYK-RINI-TVDSFEKLSLGSTFGWESVTSFPKA 1281
+NN +S+ ++GL ++ Y R N+ ++SF + ++ S
Sbjct: 1417 FINNKYLGISAFRNGLQFYVQTKRPSSYDWRFNLFNLNSFTEAPQDQKQSFQLSYS---N 1473
Query: 1282 LGDIIESLAGAIFVDSGCNREVVFQSIRPL 1311
L D +ES+ G + + Q I+ L
Sbjct: 1474 LSDTLESVVGCFYASNQFTLNTCIQLIKDL 1503
>gi|441494712|gb|AGC51036.1| melanoma-differentiation-associated 5 [Anser anser]
Length = 1004
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 369 TEKIVCLIESLLE-YRGVEDIRCIIFVERVITAIVL-QSLLSELLPRHCTWKTKYI--AG 424
EK++ L +L+E + ++ R IIF + +A L Q ++ K Y+ AG
Sbjct: 676 NEKLIKLRNTLMEEFTKTKEPRGIIFTKTRQSAFALFQWIMDNPKFEEVGIKAHYLIGAG 735
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
+NS + ++ +Q E++++FR G V++++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 736 HNSETKPMTQNEQREVIDKFRGGSVDLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMLQ 795
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQ 508
+RGRAR S Y L+ SG +
Sbjct: 796 ARGRARADESTYALVASSGSGAVE 819
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 31/191 (16%)
Query: 23 RNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLLRKPS-PFVAVFLVPKVVL 80
R+YQ+E + AL +N I+ L TGSGKT +A+ + + + ++ S P + LV KV L
Sbjct: 304 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKRASEPGKVIVLVNKVPL 363
Query: 81 VPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKHEVLVMTPQIL-------- 130
V Q ++ + + +++ +G+ D ++ E + +++V++ T QIL
Sbjct: 364 VEQH---LRKEFNPFLKRWYQVIGLSGDSQLKISFPEVVRRYDVIISTAQILENSLLNAT 420
Query: 131 ---LDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY-----HRLLETGDSNL-- 180
+G+ LS F L +I+DECHH + + Y IM + +R L + L
Sbjct: 421 EEDEEGVHLSDFSL-----IIIDECHHTQKEGVYNNIMRRYVKEKMKNRKLAKENKPLIP 475
Query: 181 -PRIFGMTASP 190
P+I G+TASP
Sbjct: 476 QPQILGLTASP 486
>gi|354493094|ref|XP_003508679.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 isoform 1 [Cricetulus griseus]
gi|344245797|gb|EGW01901.1| Interferon-induced helicase C domain-containing protein 1
[Cricetulus griseus]
Length = 1022
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 370 EKIVCLIESLLEY--RGVEDIRCIIFVERVITAIVLQSLLSELLP-RHCTWKTKYI--AG 424
EK++ L +++LE + E R IIF + + L ++E K ++ AG
Sbjct: 696 EKLIKLRKTILEQFTKTEESSRGIIFTKTRQSTYALSQWITENEKFAEVGVKAHHLIGAG 755
Query: 425 NNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQ 484
++S ++ ++ +Q E++ +FR G +N+++AT++ EEGLD++ CN+VI + + +Q
Sbjct: 756 HSSEVKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 815
Query: 485 SRGRARMQNSDYLLMVKSGDSTTQSRLEN 513
+RGRAR S Y+L+ SG T+ + N
Sbjct: 816 ARGRARADESTYVLVTSSGSGVTEREIVN 844
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 31/209 (14%)
Query: 5 SMESDTTEEVSADTLPFARNYQLEALENALK-QNTIVFLETGSGKTLIAIMLLRSYAYLL 63
S ES T+ S D R YQ+E + AL+ +N I+ L TGSGKT +A+ + + +
Sbjct: 289 SDESTGTQRASPDPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYITKDHLDKK 348
Query: 64 RKPS-PFVAVFLVPKVVLVPQQAEAIKMHTDLKVGKYWGDMGV--DFWDGATWKEEMSKH 120
++ S P + LV KV+L Q + + + K++ +G+ D ++ E + +
Sbjct: 349 KQASEPGKVMVLVNKVMLAEQ---LFRKEFNPFLKKWYRIIGLSGDTQLKISFPEVVKSY 405
Query: 121 EVLVMTPQILL-----------DGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFY 169
+V++ T QIL DG++LS F L +I+DECHH + Y IM +
Sbjct: 406 DVIISTAQILENSLLNLESGEDDGVQLSDFSL-----IIIDECHHTNKEAVYNNIMRRYL 460
Query: 170 HRLLETGDS--------NLPRIFGMTASP 190
+ L+ +LP+I G+TASP
Sbjct: 461 KQKLKNNKLKKQNKPVVHLPQILGLTASP 489
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,099,034,869
Number of Sequences: 23463169
Number of extensions: 881803495
Number of successful extensions: 2057608
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6358
Number of HSP's successfully gapped in prelim test: 6651
Number of HSP's that attempted gapping in prelim test: 2025940
Number of HSP's gapped (non-prelim): 27621
length of query: 1396
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1241
effective length of database: 8,722,404,172
effective search space: 10824503577452
effective search space used: 10824503577452
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 84 (37.0 bits)