Your job contains 1 sequence.
>000609
MGEKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIV
QPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSF
GRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLE
ESEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGH
SHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQ
FHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRK
QVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSI
NQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM
KALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENF
LILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLL
FNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKEENEI
IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK
SLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIR
NDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDI
ESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYV
KDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYP
EYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESIS
VIISIFRSIKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFSSVSLPSTLYK
PYEKKEGDDSLASERQTWLADESVLTHFESLKLETHEVVGSEIARHEALDDLEKDGNEVP
LGKMIQQLKSQGAKGGKAKKKKSSPAEVKGTENDVDILQMVREINLDNLGVLNKFESSNG
HKHFPSKQIKVDLENEEIKKRKATDVTSFPVPKRRRSLSAHGGFRTPKSNSKAPLRASGG
GSHHAGVSSFQSIDMDDDISESEVKISTKKKKFTSNESDSFASRFQGSRSFSSKRKGKSA
DLGHDNEADEVGEADEGDLKNSDMLSKSPVGSAKKRKRRSIAGLAKCTTKNAGVNIEDLI
GYRIKVWWPMDKQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000609
(1393 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169058 - symbol:AT5G47690 species:3702 "Arabi... 4159 0. 2
RGD|1307094 - symbol:Pds5a "PDS5, regulator of cohesion m... 516 3.1e-66 2
UNIPROTKB|Q29RF7 - symbol:PDS5A "Sister chromatid cohesio... 515 2.2e-65 2
UNIPROTKB|Q5F3V3 - symbol:PDS5A "Sister chromatid cohesio... 509 2.3e-65 2
UNIPROTKB|E2R7R4 - symbol:PDS5A "Uncharacterized protein"... 514 2.8e-65 2
UNIPROTKB|F1NIQ3 - symbol:PDS5A "Sister chromatid cohesio... 507 3.7e-65 2
UNIPROTKB|F1N7G8 - symbol:PDS5B "Uncharacterized protein"... 493 7.1e-64 3
UNIPROTKB|Q5F3U9 - symbol:PDS5B "Sister chromatid cohesio... 491 1.0e-63 3
UNIPROTKB|F1P3B8 - symbol:PDS5B "Sister chromatid cohesio... 491 1.2e-63 3
UNIPROTKB|F1Q0Z0 - symbol:PDS5B "Uncharacterized protein"... 493 3.0e-63 3
UNIPROTKB|Q9NTI5 - symbol:PDS5B "Sister chromatid cohesio... 492 3.9e-63 3
UNIPROTKB|Q5U241 - symbol:pds5b-b "Sister chromatid cohes... 486 7.1e-63 3
MGI|MGI:2140945 - symbol:Pds5b "PDS5, regulator of cohesi... 492 1.3e-62 3
ZFIN|ZDB-GENE-040426-1612 - symbol:pds5a "PDS5, regulator... 485 1.5e-62 2
RGD|1310838 - symbol:Pds5b "PDS5, regulator of cohesion m... 489 2.8e-62 3
UNIPROTKB|Q6TRW4 - symbol:Pds5b "Sister chromatid cohesio... 489 2.8e-62 3
ZFIN|ZDB-GENE-091217-2 - symbol:pds5b "PDS5, regulator of... 490 4.9e-62 3
UNIPROTKB|Q4QXM3 - symbol:pds5a-a "Sister chromatid cohes... 487 9.1e-62 3
UNIPROTKB|Q4KLU7 - symbol:pds5a-b "Sister chromatid cohes... 488 1.9e-61 3
UNIPROTKB|Q498H0 - symbol:pds5b-a "Sister chromatid cohes... 473 1.8e-60 4
UNIPROTKB|I3LU95 - symbol:PDS5A "Uncharacterized protein"... 469 2.0e-60 2
UNIPROTKB|E1BKG4 - symbol:E1BKG4 "Uncharacterized protein... 393 2.8e-52 2
TAIR|locus:2116787 - symbol:AT4G31880 species:3702 "Arabi... 518 4.6e-49 2
POMBASE|SPAC110.02 - symbol:pds5 "cohesin-associated prot... 387 4.2e-47 2
FB|FBgn0260012 - symbol:pds5 species:7227 "Drosophila mel... 482 1.5e-43 2
TAIR|locus:2200557 - symbol:AT1G15940 species:3702 "Arabi... 446 7.3e-41 2
TAIR|locus:2025712 - symbol:AT1G80810 species:3702 "Arabi... 379 9.5e-34 2
ASPGD|ASPL0000065875 - symbol:bimD species:162425 "Emeric... 185 1.0e-25 5
DICTYBASE|DDB_G0275929 - symbol:pds5 "sister chromatid co... 154 1.9e-24 5
CGD|CAL0006191 - symbol:PDS5 species:5476 "Candida albica... 192 1.9e-18 3
UNIPROTKB|Q5A2J0 - symbol:PDS5 "Putative uncharacterized ... 192 1.9e-18 3
SGD|S000004681 - symbol:PDS5 "Protein involved in sister ... 197 6.9e-13 3
WB|WBGene00001352 - symbol:evl-14 species:6239 "Caenorhab... 151 3.3e-09 5
>TAIR|locus:2169058 [details] [associations]
symbol:AT5G47690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA;IDA] [GO:0007067 "mitosis" evidence=RCA]
InterPro:IPR016024 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB016886 KO:K11267 eggNOG:NOG268017
OMA:NMIARRI IPI:IPI00892180 RefSeq:NP_001119390.1 UniGene:At.44744
ProteinModelPortal:B3H5K3 SMR:B3H5K3 PaxDb:B3H5K3 PRIDE:B3H5K3
EnsemblPlants:AT5G47690.3 GeneID:834820 KEGG:ath:AT5G47690
TAIR:At5g47690 HOGENOM:HOG000064635 PhylomeDB:B3H5K3
ProtClustDB:CLSN2702261 Genevestigator:B3H5K3 Uniprot:B3H5K3
Length = 1607
Score = 4159 (1469.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 808/1264 (63%), Positives = 988/1264 (78%)
Query: 1 MGEKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIV 60
M +K E+QLKE+GSKL+ P +KD L+KLLK+AA CLSEL QSPP ++L+++QPFL+A++
Sbjct: 1 MAQKPEEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVI 60
Query: 61 QPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSF 120
+P +L HQDKDVKLLVA+C+ EITRITAPEAPYSD+++KDIFQLIV F+GL D GPSF
Sbjct: 61 KPEILNHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSF 120
Query: 121 GRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLE 180
GRRV+ILET+AKYRSCVVMLDLECD+LV E+++TF VA DDHPE V SSMQ IMIVLLE
Sbjct: 121 GRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLE 180
Query: 181 ESEDIQEDLLVILLSALGRNKNDT---ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSR 237
ESED+QE LL+ILLS LGRN++D ARRLAM VIE CA K+E+ IKQFL+SSMSGDSR
Sbjct: 181 ESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSR 240
Query: 238 PGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S IDYHEVIYD+YRC+PQ LSGV PYLTGELL D+L+TRLK VGLVG+LF++PG
Sbjct: 241 FSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLETRLKVVGLVGELFSLPGRVI 300
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDEN 357
+E+F S+F EFLKRLTDR+V VRM++L+H+K CLL+DP RA+A QI++ALCDRLLD+DEN
Sbjct: 301 SEEFDSIFLEFLKRLTDRVVEVRMAILDHIKDCLLSDPLRAEASQIISALCDRLLDYDEN 360
Query: 358 VRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFN 417
+RKQVVAVICDV+ AL SIPV+T+KLVAERLRDK++LVK YTMERL ++FR CLR +
Sbjct: 361 IRKQVVAVICDVSVSALTSIPVDTMKLVAERLRDKAILVKTYTMERLTELFRVYCLRCAD 420
Query: 418 GSINQNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDR 477
G ++ +F WIPGKILRCLYDKDF SDTIE +LC SLFP+ FSV+D+V+HW++IFSGFD+
Sbjct: 421 GKVDTGDFNWIPGKILRCLYDKDFRSDTIEYILCSSLFPSDFSVRDKVKHWIQIFSGFDK 480
Query: 478 IEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+E KA EKILEQ+QR+QQEMQRYLS++Q Q DAPEIQKKILF FRVMSR+F++P K E
Sbjct: 481 VETKAFEKILEQRQRIQQEMQRYLSIKQTQQTADAPEIQKKILFGFRVMSRAFSDPPKTE 540
Query: 538 ENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCS 597
+NFLILDQLKDAN+WKIL NLLD NTS QA RDD+LKIL KH LYDFLSTLS+KCS
Sbjct: 541 QNFLILDQLKDANIWKILTNLLDPNTSITQASRIRDDMLKILSEKHSLYDFLSTLSIKCS 600
Query: 598 YLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTXXXXXXXXXXX 657
YLLF+KE+VKEIL EV+ +KSS N +Q CMD LG+LA F P L G
Sbjct: 601 YLLFSKEYVKEILAEVSVRKSSKNTLGIQPCMDFLGLLACFCPSLFDGAEEELISFLKDD 660
Query: 658 XXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDD 717
++KEG L +LAKAGGTIRE L +SSVDLLLER+C+EG+R+QAKYAVHALA+ITKDD
Sbjct: 661 DEMMKEGTLKILAKAGGTIRENLIVLASSVDLLLERICVEGNRKQAKYAVHALASITKDD 720
Query: 718 GLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSN 777
GLKSLSVLYKRLVDMLE+K + PAVLQ LGCIAQ AMPV+ETR L+ +
Sbjct: 721 GLKSLSVLYKRLVDMLEDKRYQPAVLQCLGCIAQIAMPVYETRESEVVEFIRSKILKLKS 780
Query: 778 KIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMS 837
+ +D K WDD+SE+C LKIYGIKTLVKSYLP KDA +R G+DDLLGILK++LS+GE+S
Sbjct: 781 ETVDDKKLSWDDKSEICQLKIYGIKTLVKSYLPFKDAQLRAGVDDLLGILKNILSFGEVS 840
Query: 838 EDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVH 897
ED+ESSSVDKAHLRLA+AKAVLRLSR WD KIP+++FHLTL+TPEI FP AKK+FL KVH
Sbjct: 841 EDLESSSVDKAHLRLAAAKAVLRLSRHWDDKIPIEIFHLTLKTPEIPFPTAKKIFLGKVH 900
Query: 898 QYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFA 957
QYVKDR+L+ KYAC+FLF IT S E EE+K NLADIIQ +Q K R+IS Q+DANS
Sbjct: 901 QYVKDRVLEMKYACSFLFDITGSNVLESEEDKHNLADIIQHSYQTKVRKISAQTDANSVT 960
Query: 958 TYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKE 1017
YP +I+PYLVH AHHSCPD+++CKDVK +E++Y +LY I+SML+HK+ED K+E +KE
Sbjct: 961 LYPHHILPYLVHALAHHSCPDVEKCKDVKEYEMIYRQLYLIISMLLHKEEDGKTEDIDKE 1020
Query: 1018 XXX--XXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFSSVSLP 1075
K SED+ DA KSKNSHAIC+LGLSI L++ E + QG + VSLP
Sbjct: 1021 REYVPTIILIFHSIKQSEDVTDATKSKNSHAICELGLSIINHLTQKEPDLQGEITPVSLP 1080
Query: 1076 STLYKPYEKKEGDDSLASERQTWLADESVLTHFESLKLETHE--VVGSEIARHEALDDLE 1133
TLYKP EK EGD S E + WLADE+VL HF +LKLE+H V + + +E + D E
Sbjct: 1081 PTLYKPSEKVEGDKSQVGEEKLWLADETVLLHFRALKLESHADASVIPQTSENEVMIDGE 1140
Query: 1134 KDGNEVPLGKMIXXXXXXXXXXXXXXXXXXXXXEVKGTENDVDILQMVREINLDNLGVLN 1193
DGNE+PLGK++ E + +NDVD+L+MVREINLD+L +L+
Sbjct: 1141 SDGNEIPLGKIVERLRAQGTKTRKGKKNKSVPAEDENGKNDVDVLKMVREINLDHLQMLD 1200
Query: 1194 KFESSNGHKHFPSKQIKVDLENEEIKKRKATDVTSF-PVPKRRRSLSAHGGFRTPKSNSK 1252
KFESSNGHKH PS++ ++ +++ KR D TS VPKRRRS S H ++ S K
Sbjct: 1201 KFESSNGHKHSPSERAEICQRDQKGNKRNVGDATSVVSVPKRRRSSSGHSPYKFSNSGPK 1260
Query: 1253 APLR 1256
L+
Sbjct: 1261 VQLK 1264
Score = 138 (53.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 1343 DMLSKSPVGSAKKRKRRSIAGLAKCTTK-NAGVNIEDLIGYRIKVWWPMDKQ 1393
D KS GS KKRK +++GLAKC+TK N VN ++LIG RI+VWWPMDK+
Sbjct: 1334 DSKLKSASGSMKKRK--NVSGLAKCSTKENKLVN-DELIGCRIEVWWPMDKR 1382
>RGD|1307094 [details] [associations]
symbol:Pds5a "PDS5, regulator of cohesion maintenance, homolog A
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008156 "negative
regulation of DNA replication" evidence=ISO;ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 RGD:1307094 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0000785
GO:GO:0008156 HOVERGEN:HBG108241 CTD:23244 KO:K11267
eggNOG:NOG268017 HOGENOM:HOG000230672 OrthoDB:EOG46T30N
EMBL:EF460313 IPI:IPI00364488 RefSeq:NP_001077093.1
UniGene:Rn.24482 ProteinModelPortal:A4L9P7 STRING:A4L9P7
PhosphoSite:A4L9P7 PRIDE:A4L9P7 Ensembl:ENSRNOT00000003437
GeneID:305343 KEGG:rno:305343 UCSC:RGD:1307094
GeneTree:ENSGT00390000012488 InParanoid:A4L9P7 NextBio:654401
Genevestigator:A4L9P7 Uniprot:A4L9P7
Length = 1333
Score = 516 (186.7 bits), Expect = 3.1e-66, Sum P(2) = 3.1e-66
Identities = 193/774 (24%), Positives = 341/774 (44%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T T D ++K LK +++Q + + P + L++ +KDV
Sbjct: 27 GVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNPNKDV 85
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE LA
Sbjct: 86 RLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 145
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL 190
+S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++LL
Sbjct: 146 WVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELL 205
Query: 191 -VILLSALGRNKNDTARR--LAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYH- 246
IL++ + +KN + LA ++++ +EA I F + + R S + H
Sbjct: 206 DSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFF-NQVLVLGRSSVSDLSEHV 264
Query: 247 -EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVF 305
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 265 FDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLW 324
Query: 306 SEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVA 364
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 325 QCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRHDVIV 381
Query: 365 VICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNE 424
I A L + + + V ER DK V++ M LA +++ CL G +
Sbjct: 382 TIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEK 441
Query: 425 FEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKAL 483
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 442 VSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKAL 501
Query: 484 EKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLI 542
++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 502 NEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQDFVKK 557
Query: 543 LDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KC 596
+Q L D + + LL S T S QA R+ K+ K FL + +
Sbjct: 558 FNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFLLERI 617
Query: 597 SYLLFNKEHVKEIL------LEVAAQKSSANAQ---FMQSCMDILGILARFSPLLLGG-- 645
+ + + E + ++ +E A ++S +++L +L+ P
Sbjct: 618 APVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVLSFTHPTSFHSAE 677
Query: 646 TXXXXXXXXXXXXXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKY 705
T + E + + G I L S++ +L + G+ QAK
Sbjct: 678 TYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQ 737
Query: 706 AVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVF 757
AVH + AI + ++ L+ +++ L L L L SLG I+ A F
Sbjct: 738 AVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQF 790
Score = 252 (93.8 bits), Expect = 3.1e-66, Sum P(2) = 3.1e-66
Identities = 105/445 (23%), Positives = 190/445 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 693 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQ 752
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 753 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 811
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 812 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 870
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 871 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 930
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y F + +Q L I + + +Q + +
Sbjct: 931 FAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPMAT 989
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD +DV ++ C L+F++ +L+ K+E+
Sbjct: 990 E-KLLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIKEC-LWFMLEVLMTKNEN-N 1044
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ S D +A ++ + +CD+ L + S + N+
Sbjct: 1045 SHAFMKKMAENIKLTRDAQ--SPD--EAKTNEKLYTVCDVALCVINSKSAL-CNADSPKD 1099
Query: 1071 SVSLPSTLYKPYEKK-EGDDSLASE 1094
V LP + EK D S SE
Sbjct: 1100 PV-LPMKFFTQPEKDFSNDKSYISE 1123
>UNIPROTKB|Q29RF7 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9606 "Homo sapiens" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008156 "negative regulation of
DNA replication" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
Reactome:REACT_115566 SUPFAM:SSF48371 Reactome:REACT_21300
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0007067 GO:GO:0000785 GO:GO:0008156 HOVERGEN:HBG108241
CTD:23244 KO:K11267 eggNOG:NOG268017 HOGENOM:HOG000230672
OrthoDB:EOG46T30N EMBL:AY550968 EMBL:AK098331 EMBL:BC041361
EMBL:BC114218 EMBL:BC126225 EMBL:AF294791 EMBL:CR749425
EMBL:AB014548 IPI:IPI00854642 IPI:IPI00854687 RefSeq:NP_001093869.1
RefSeq:NP_001093870.1 UniGene:Hs.331431 ProteinModelPortal:Q29RF7
IntAct:Q29RF7 STRING:Q29RF7 PhosphoSite:Q29RF7 DMDM:121947590
PaxDb:Q29RF7 PRIDE:Q29RF7 DNASU:23244 Ensembl:ENST00000303538
Ensembl:ENST00000503396 GeneID:23244 KEGG:hsa:23244 UCSC:uc003guv.4
UCSC:uc003guw.4 GeneCards:GC04M039824 HGNC:HGNC:29088 HPA:HPA036662
MIM:613200 neXtProt:NX_Q29RF7 PharmGKB:PA162399027
InParanoid:Q29RF7 OMA:TKDAQSP ChiTaRS:PDS5A GenomeRNAi:23244
NextBio:44916 ArrayExpress:Q29RF7 Bgee:Q29RF7 CleanEx:HS_PDS5A
Genevestigator:Q29RF7 Uniprot:Q29RF7
Length = 1337
Score = 515 (186.3 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 193/774 (24%), Positives = 341/774 (44%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T T D ++K LK +++Q + + P + L++ +KDV
Sbjct: 28 GVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNPNKDV 86
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE LA
Sbjct: 87 RLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 146
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL 190
+S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++LL
Sbjct: 147 WVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELL 206
Query: 191 -VILLSALGRNKNDTARR--LAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYH- 246
IL++ + +KN + LA ++++ +EA I F + + R S + H
Sbjct: 207 DSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFF-NQVLVLGRSSVSDLSEHV 265
Query: 247 -EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVF 305
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 266 FDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLW 325
Query: 306 SEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVA 364
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 326 QCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRHDVIV 382
Query: 365 VICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNE 424
I A L + + + V ER DK V++ M LA +++ CL G +
Sbjct: 383 TIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEK 442
Query: 425 FEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKAL 483
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 443 VSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKAL 502
Query: 484 EKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLI 542
++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 503 NEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQDFVKK 558
Query: 543 LDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KC 596
+Q L D + + LL S T S QA R+ K+ K FL + +
Sbjct: 559 FNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFLLERI 618
Query: 597 SYLLFNKEHVKEIL------LEVAAQKSSANAQ---FMQSCMDILGILARFSPLLLGG-- 645
+ + + E + ++ +E A ++S +++L +L+ P
Sbjct: 619 APVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELLKVLSFTHPTSFHSAE 678
Query: 646 TXXXXXXXXXXXXXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKY 705
T + E + + G I L S++ +L + G+ QAK
Sbjct: 679 TYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQ 738
Query: 706 AVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVF 757
AVH + AI + ++ L+ +++ L L L L SLG I+ A F
Sbjct: 739 AVHCIHAIFTNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQF 791
Score = 245 (91.3 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 104/445 (23%), Positives = 190/445 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 694 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQ 753
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 754 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 812
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 813 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 871
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 872 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 931
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y F + +Q L I + + +Q + +
Sbjct: 932 FAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPMAT 990
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD +DV ++ C L+F++ +L+ K+E+
Sbjct: 991 E-KLLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIKEC-LWFMLEVLMTKNEN-N 1045
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ S D ++ ++ + +CD+ L + S + N+
Sbjct: 1046 SHAFMKKMAENIKLTRDAQ--SPD--ESKTNEKLYTVCDVALCVINSKSAL-CNADSPKD 1100
Query: 1071 SVSLPSTLYKPYEKKE-GDDSLASE 1094
V LP + EK D S SE
Sbjct: 1101 PV-LPMKFFTQPEKDFCNDKSYISE 1124
>UNIPROTKB|Q5F3V3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
HOVERGEN:HBG108241 CTD:23244 KO:K11267 EMBL:AJ851547
IPI:IPI00599274 RefSeq:NP_001012598.1 UniGene:Gga.17541
ProteinModelPortal:Q5F3V3 STRING:Q5F3V3 GeneID:422787
KEGG:gga:422787 eggNOG:NOG268017 HOGENOM:HOG000230672
InParanoid:Q5F3V3 OrthoDB:EOG46T30N NextBio:20825370 Uniprot:Q5F3V3
Length = 1330
Score = 509 (184.2 bits), Expect = 2.3e-65, Sum P(2) = 2.3e-65
Identities = 191/773 (24%), Positives = 338/773 (43%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T T D +VK LK +++Q + + P + L++ +KDV
Sbjct: 22 GVKETTDKITNDEVVKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNPNKDV 80
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE LA
Sbjct: 81 RLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 140
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL 190
+S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++LL
Sbjct: 141 WVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELL 200
Query: 191 -VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHIDYH 246
IL++ + +N N A LA ++++ +E I F + G S
Sbjct: 201 DSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEHVF 260
Query: 247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFS 306
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 261 DLILELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQ 320
Query: 307 EFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVAV 365
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 321 CFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRHDVIVT 377
Query: 366 ICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEF 425
I L+ + + + V ER DK V++ M LA +++ CL G +
Sbjct: 378 IITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKV 437
Query: 426 EWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALE 484
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 438 SWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALN 497
Query: 485 KILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLIL 543
++ + + L+ ++ L L +Q + ++ + K++ ++++ +P KA++
Sbjct: 498 EMWKCQNMLRSHVRELLDLHKQPTSEANSAAMFGKLM----TIAKNLPDPGKAQDFVKKF 553
Query: 544 DQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KCS 597
+Q L D + + LL S T S QA R+ K+ K FL + + +
Sbjct: 554 NQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIA 613
Query: 598 YLLFNKEHVKEIL------LEVAAQKSSANAQ---FMQSCMDILGILARFSPLLLGG--T 646
+ + E + ++ +E A +++ +++L +L+ P T
Sbjct: 614 PVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAET 673
Query: 647 XXXXXXXXXXXXXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYA 706
+ E + + G I L S++ +L + G+ QAK A
Sbjct: 674 YESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQA 733
Query: 707 VHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVF 757
VH + AI + ++ L+ +++ L L L L SLG I+ A F
Sbjct: 734 VHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQF 785
Score = 251 (93.4 bits), Expect = 2.3e-65, Sum P(2) = 2.3e-65
Identities = 103/440 (23%), Positives = 191/440 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 688 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQ 747
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 748 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFVVKDLLMNDR 806
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 807 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 865
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 866 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 925
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y +F + +K P +E + + + + ++ I
Sbjct: 926 FAQKLHKALVKLLLPLEYMA--IFALC-AKDP-VKERRAHARQCLLKNISIRREYIKQNP 981
Query: 952 DANS--FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDV 1009
AN + PEY++PY++H AH PD + +DV V L+F++ +L+ K+E+
Sbjct: 982 MANEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDVDQLRDVKECLWFMLEVLMTKNEN- 1038
Query: 1010 KSEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVF 1069
S A K+ S D + ++ + +CD+ L + S + N+
Sbjct: 1039 NSHAFMKKMAENIKLTRDAQ--SPD--EPKANEKLYTVCDVALCVINSKSAL-CNADSPK 1093
Query: 1070 SSVSLPSTLYKPYEKKEGDD 1089
V LP+ + EK +D
Sbjct: 1094 DPV-LPTKFFTQPEKDFSND 1112
Score = 37 (18.1 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 1174 DVDILQMVREINLDNLGVLNKFESSNGHKHFP--SKQIKVDLENEEIKKRKATD 1225
DVD L+ V+E L VL +N H ++ IK+ + + + KA +
Sbjct: 1014 DVDQLRDVKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDEPKANE 1067
>UNIPROTKB|E2R7R4 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008156 "negative regulation of DNA
replication" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 CTD:23244 KO:K11267 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AAEX03002532 RefSeq:XP_851177.1
Ensembl:ENSCAFT00000025282 GeneID:479103 KEGG:cfa:479103
NextBio:20854336 Uniprot:E2R7R4
Length = 1337
Score = 514 (186.0 bits), Expect = 2.8e-65, Sum P(2) = 2.8e-65
Identities = 193/774 (24%), Positives = 341/774 (44%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T T D ++K LK +++Q + + P + L++ +KDV
Sbjct: 28 GVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNPNKDV 86
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE LA
Sbjct: 87 RLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 146
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL 190
+S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++LL
Sbjct: 147 WVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELL 206
Query: 191 -VILLSALGRNKNDTARR--LAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYH- 246
IL++ + +KN + LA ++++ +EA I F + + R S + H
Sbjct: 207 DSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFF-NQVLVLGRSSVSDLSEHV 265
Query: 247 -EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVF 305
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 266 FDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLW 325
Query: 306 SEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVA 364
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 326 QCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRHDVIV 382
Query: 365 VICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNE 424
I A L + + + V ER DK V++ M LA +++ CL G +
Sbjct: 383 TIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEK 442
Query: 425 FEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKAL 483
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 443 VSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKAL 502
Query: 484 EKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLI 542
++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 503 NEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQDFVKK 558
Query: 543 LDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KC 596
+Q L D + + LL S T S QA R+ K+ K FL + +
Sbjct: 559 FNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERI 618
Query: 597 SYLLFNKEHVKEIL------LEVAAQKSSANAQ---FMQSCMDILGILARFSPLLLGG-- 645
+ + + E + ++ +E A ++S +++L +L+ P
Sbjct: 619 APVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELLKVLSFTHPTSFHSAE 678
Query: 646 TXXXXXXXXXXXXXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKY 705
T + E + + G I L S++ +L + G+ QAK
Sbjct: 679 TYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQ 738
Query: 706 AVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVF 757
AVH + AI + ++ L+ +++ L L L L SLG I+ A F
Sbjct: 739 AVHCIHAIFTNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQF 791
Score = 245 (91.3 bits), Expect = 2.8e-65, Sum P(2) = 2.8e-65
Identities = 104/445 (23%), Positives = 190/445 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 694 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQ 753
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 754 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 812
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 813 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 871
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 872 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 931
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y F + +Q L I + + +Q + +
Sbjct: 932 FAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPMAT 990
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD +DV ++ C L+F++ +L+ K+E+
Sbjct: 991 E-KLLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIKEC-LWFMLEVLMTKNEN-N 1045
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ S D ++ ++ + +CD+ L + S + N+
Sbjct: 1046 SHAFMKKMAENIKLTKDAQ--SPD--ESKMNEKLYTVCDVALCVINSKSAL-CNADSPKD 1100
Query: 1071 SVSLPSTLYKPYEKKE-GDDSLASE 1094
V LP + EK D S SE
Sbjct: 1101 PV-LPMKFFTQPEKDFCNDKSYISE 1124
>UNIPROTKB|F1NIQ3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008156 "negative regulation of
DNA replication" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 IPI:IPI00599274 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AADN02031215 EMBL:AADN02031216
EMBL:AADN02031217 Ensembl:ENSGALT00000023102 Uniprot:F1NIQ3
Length = 1330
Score = 507 (183.5 bits), Expect = 3.7e-65, Sum P(2) = 3.7e-65
Identities = 191/773 (24%), Positives = 338/773 (43%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T T D +VK LK +++Q + + P + L++ +KDV
Sbjct: 22 GVKEITDKITNDEVVKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNPNKDV 80
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE LA
Sbjct: 81 RLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 140
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL 190
+S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++LL
Sbjct: 141 WVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELL 200
Query: 191 -VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHIDYH 246
IL++ + +N N A LA ++++ +E I F + G S
Sbjct: 201 DSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEHVF 260
Query: 247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFS 306
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 261 DLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQ 320
Query: 307 EFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVAV 365
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 321 CFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRHDVIVT 377
Query: 366 ICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEF 425
I L+ + + + V ER DK V++ M LA +++ CL G +
Sbjct: 378 IITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKV 437
Query: 426 EWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALE 484
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 438 SWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALN 497
Query: 485 KILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLIL 543
++ + + L+ ++ L L +Q + ++ + K++ ++++ +P KA++
Sbjct: 498 EMWKCQNMLRSHVRELLDLHKQPTSEANSAAMFGKLM----TIAKNLPDPGKAQDFVKKF 553
Query: 544 DQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KCS 597
+Q L D + + LL S T S QA R+ K+ K FL + + +
Sbjct: 554 NQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIA 613
Query: 598 YLLFNKEHVKEIL------LEVAAQKSSANAQ---FMQSCMDILGILARFSPLLLGG--T 646
+ + E + ++ +E A +++ +++L +L+ P T
Sbjct: 614 PVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAET 673
Query: 647 XXXXXXXXXXXXXIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYA 706
+ E + + G I L S++ +L + G+ QAK A
Sbjct: 674 YESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQA 733
Query: 707 VHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVF 757
VH + AI + ++ L+ +++ L L L L SLG I+ A F
Sbjct: 734 VHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQF 785
Score = 251 (93.4 bits), Expect = 3.7e-65, Sum P(2) = 3.7e-65
Identities = 103/440 (23%), Positives = 191/440 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 688 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQ 747
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 748 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 806
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 807 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 865
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 866 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 925
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y +F + +K P +E + + + + ++ I
Sbjct: 926 FAQKLHKALVKLLLPLEYMA--IFALC-AKDP-VKERRAHARQCLLKNISIRREYIKQNP 981
Query: 952 DANS--FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDV 1009
AN + PEY++PY++H AH PD + +DV V L+F++ +L+ K+E+
Sbjct: 982 MANEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDVDQLRDVKECLWFMLEVLMTKNEN- 1038
Query: 1010 KSEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVF 1069
S A K+ S D + ++ + +CD+ L + S + N+
Sbjct: 1039 NSHAFMKKMAENIKLTRDAQ--SPD--EPKANEKLYTVCDVALCVINSKSAL-CNADSPK 1093
Query: 1070 SSVSLPSTLYKPYEKKEGDD 1089
V LP+ + EK +D
Sbjct: 1094 DPV-LPTKFFTQPEKDFSND 1112
Score = 37 (18.1 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 1174 DVDILQMVREINLDNLGVLNKFESSNGHKHFP--SKQIKVDLENEEIKKRKATD 1225
DVD L+ V+E L VL +N H ++ IK+ + + + KA +
Sbjct: 1014 DVDQLRDVKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDEPKANE 1067
>UNIPROTKB|F1N7G8 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
InterPro:IPR016024 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000785 GO:GO:0007064
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:DAAA02033076
IPI:IPI00826394 Ensembl:ENSBTAT00000015410 Uniprot:F1N7G8
Length = 1449
Score = 493 (178.6 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 158/588 (26%), Positives = 275/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSA 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + WI K+L Y +E + + P +R++ +++
Sbjct: 425 AGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P
Sbjct: 485 DLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLG 588
Score = 257 (95.5 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 92/402 (22%), Positives = 177/402 (44%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + GG I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGGKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S ++KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + V L+F++ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ DA ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDAKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 39 (18.8 bits), Expect = 4.2e-41, Sum P(3) = 4.2e-41
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 788 DDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
D R + L++ K + PV D+ + G+DDL +++ G
Sbjct: 1199 DKRDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLSKLVQEQKPKG 1245
>UNIPROTKB|Q5F3U9 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0051301 "cell division"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AJ851551 IPI:IPI00592195 UniGene:Gga.33882 STRING:Q5F3U9
PRIDE:Q5F3U9 InParanoid:Q5F3U9 Uniprot:Q5F3U9
Length = 1412
Score = 491 (177.9 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 159/588 (27%), Positives = 278/588 (47%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A L + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSE 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + WI K+L Y +E + + P +R++ +++
Sbjct: 425 AGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ + L +Q D + I K++ V++R+ +P
Sbjct: 485 DSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQAFTGRDDLLKILG 580
KA++ Q L+D + + +L S T S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLG 588
Score = 257 (95.5 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 92/402 (22%), Positives = 176/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKKGPPRQAKYAIHCINAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S L+KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQIF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + + L+FI+ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDIKECLWFILEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ DA ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDAKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 42 (19.8 bits), Expect = 2.9e-41, Sum P(3) = 2.9e-41
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 917 ITESKSPEFEEEKQNLADIIQMHHQMKA 944
++ES +++EEK+ D+I+ + +
Sbjct: 1254 VSESDETQWQEEKRLKEDVIESEDEQNS 1281
Score = 37 (18.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 270 ELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRM 321
E+L + +A G V ++ G N +Q + F E +K L +RI V +
Sbjct: 564 EMLVSPTCSCKQAEGCVREITKKLG--NPKQPTNPFLEMIKFLLERIAPVHI 613
>UNIPROTKB|F1P3B8 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] InterPro:IPR016024 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488
IPI:IPI00592195 UniGene:Gga.33882 CTD:23047 OMA:AKKGPPR
EMBL:AC147444 RefSeq:NP_001012845.2 Ensembl:ENSGALT00000027571
GeneID:418910 KEGG:gga:418910 NextBio:20822038 ArrayExpress:F1P3B8
Uniprot:F1P3B8
Length = 1446
Score = 491 (177.9 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 159/588 (27%), Positives = 278/588 (47%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A L + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSE 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + WI K+L Y +E + + P +R++ +++
Sbjct: 425 AGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ + L +Q D + I K++ V++R+ +P
Sbjct: 485 DSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQAFTGRDDLLKILG 580
KA++ Q L+D + + +L S T S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLG 588
Score = 257 (95.5 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 92/402 (22%), Positives = 176/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKKGPPRQAKYAIHCINAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S L+KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQIF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + + L+FI+ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDIKECLWFILEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ DA ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDAKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 42 (19.8 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 917 ITESKSPEFEEEKQNLADIIQMHHQMKA 944
++ES +++EEK+ D+I+ + +
Sbjct: 1254 VSESDETQWQEEKRLKEDVIESEDEQNS 1281
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 270 ELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRM 321
E+L + +A G V ++ G N +Q + F E +K L +RI V +
Sbjct: 564 EMLVSPTCSCKQAEGCVREITKKLG--NPKQPTNPFLEMIKFLLERIAPVHI 613
>UNIPROTKB|F1Q0Z0 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488 CTD:23047
OMA:AKKGPPR EMBL:AAEX03014215 RefSeq:XP_543139.3
Ensembl:ENSCAFT00000010289 GeneID:486014 KEGG:cfa:486014
Uniprot:F1Q0Z0
Length = 1447
Score = 493 (178.6 bits), Expect = 3.0e-63, Sum P(3) = 3.0e-63
Identities = 158/588 (26%), Positives = 275/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSA 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + WI K+L Y +E + + P +R++ +++
Sbjct: 425 AGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P
Sbjct: 485 DLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLG 588
Score = 251 (93.4 bits), Expect = 3.0e-63, Sum P(3) = 3.0e-63
Identities = 91/402 (22%), Positives = 176/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S ++KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + V L+F++ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ DA ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDAKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 3.0e-63, Sum P(3) = 3.0e-63
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 40 (19.1 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 788 DDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
D R + L++ K + PV D+ + G+DDL +++ G
Sbjct: 1199 DKRDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKG 1245
>UNIPROTKB|Q9NTI5 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005524
"ATP binding" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0042127 "regulation of cell proliferation"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_115566 GO:GO:0008285 SUPFAM:SSF48371
Reactome:REACT_21300 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0008283
GO:GO:0000785 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
eggNOG:NOG268017 OrthoDB:EOG46T30N EMBL:U95825 EMBL:AB023196
EMBL:AK026889 EMBL:AL137201 EMBL:AL138820 EMBL:Z75889 EMBL:BC039256
EMBL:BC070274 IPI:IPI00240812 IPI:IPI00845253 IPI:IPI00845353
IPI:IPI00845446 IPI:IPI00845459 RefSeq:NP_055847.1
UniGene:Hs.646051 ProteinModelPortal:Q9NTI5 SMR:Q9NTI5
IntAct:Q9NTI5 STRING:Q9NTI5 PhosphoSite:Q9NTI5 DMDM:74725312
PaxDb:Q9NTI5 PRIDE:Q9NTI5 DNASU:23047 Ensembl:ENST00000315596
Ensembl:ENST00000450460 GeneID:23047 KEGG:hsa:23047 UCSC:uc001uun.3
UCSC:uc001uuo.3 UCSC:uc010abf.3 CTD:23047 GeneCards:GC13P033160
HGNC:HGNC:20418 HPA:HPA039513 HPA:HPA040015 MIM:605333
neXtProt:NX_Q9NTI5 PharmGKB:PA162399098 OMA:AKKGPPR ChiTaRS:PDS5B
GenomeRNAi:23047 NextBio:44084 ArrayExpress:Q9NTI5 Bgee:Q9NTI5
CleanEx:HS_PDS5B Genevestigator:Q9NTI5 Uniprot:Q9NTI5
Length = 1447
Score = 492 (178.3 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 158/588 (26%), Positives = 275/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSA 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + WI K+L Y +E + + P +R++ +++
Sbjct: 425 AGKDAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P
Sbjct: 485 DLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLG 588
Score = 251 (93.4 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 91/402 (22%), Positives = 176/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S ++KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + V L+F++ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ DA ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDAKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 38 (18.4 bits), Expect = 6.8e-41, Sum P(3) = 6.8e-41
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 922 SPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPE 961
+PE EEE++ + + K++Q V A A PE
Sbjct: 1323 APEEEEEEERQSG--NTEQKSKSKQHRVSRRAQQRAESPE 1360
>UNIPROTKB|Q5U241 [details] [associations]
symbol:pds5b-b "Sister chromatid cohesion protein PDS5
homolog B-B" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC086289 RefSeq:NP_001088643.2 UniGene:Xl.49057
ProteinModelPortal:Q5U241 IntAct:Q5U241 PRIDE:Q5U241 GeneID:495695
KEGG:xla:495695 CTD:495695 Xenbase:XB-GENE-6041384 Uniprot:Q5U241
Length = 1464
Score = 486 (176.1 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 155/588 (26%), Positives = 273/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKEQYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE C+E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDCNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL ++ L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ L+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHSLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A L + + + V ER DK V++ M LA I++ L+
Sbjct: 365 AIRHDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQVE 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + + WI K+L Y +E + + P +R++ +++
Sbjct: 425 AGKESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ ++ L L ++ + + I K++ V++++ +P
Sbjct: 485 DTNAVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITKNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
K ++ Q+ D + L L+ S+ QA D+ K LG
Sbjct: 541 KGQDFLKKFTQVLEDDEKIRGQLEKLVSPTCSYKQAEVCVRDITKKLG 588
Score = 255 (94.8 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 95/404 (23%), Positives = 185/404 (45%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAI--TKDDG 718
+ E L + G I E S++ +L++ +GS RQAKY++H + AI +K+
Sbjct: 684 VAEAALQIFKNTGNKIEEDFPHIRSALLPVLQQKAKKGSPRQAKYSIHCIHAIFSSKETQ 743
Query: 719 LKSL-SVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSN 777
+ L+K L E+ L L ++G IAQ A F L S+
Sbjct: 744 FAQIFEPLHKSLDPGNPEQ--LITSLVTIGHIAQLAPDQFTAPLKSMVATFVVKDLLMSD 801
Query: 778 KIRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-S 832
++ T W DD S+ ++KI IK +V+ L +K+ + G + L +L ++L +
Sbjct: 802 QLPGKKTTKLWVPDDEVSQETMVKIQAIKMMVRWLLGMKNNLSKSG-NSTLRLLTAILHT 860
Query: 833 YGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKK 890
G+++E + S D + LRLA+ A+++L+++ + I ++ + L Q ++
Sbjct: 861 DGDLTEHGKLSKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALVINDECYQVRQ 920
Query: 891 LFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQ 950
LF K+H+ + L +Y + +Q L I + + + +V
Sbjct: 921 LFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVS 980
Query: 951 SDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVK 1010
F+ PEY++PY VH H PD + +D++ + + L+F++ +L+ K+E+
Sbjct: 981 EKL--FSLLPEYVVPYTVHLLTHD--PDYVKVQDIEQLKDIKECLWFVLEILMSKNEN-N 1035
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
S A ++ K +++ D ++ + +CD+ ++I
Sbjct: 1036 SHAFIRKMVEYIKQT----KDAQNPDDQKMNEKMYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 37 (18.1 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 297 NNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCL 331
N +Q + F E +K L +RI V + E + S +
Sbjct: 589 NPKQPTNPFLEMIKFLLERIAPVHIDT-ESISSLI 622
>MGI|MGI:2140945 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance,
homolog B (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 MGI:MGI:2140945 GO:GO:0005634
GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267 eggNOG:NOG268017
OrthoDB:EOG46T30N GeneTree:ENSGT00390000012488 CTD:23047
EMBL:AY102267 EMBL:AK041682 EMBL:AK045159 EMBL:AK048706
EMBL:AK164853 EMBL:BC096539 EMBL:AK122414 IPI:IPI00317401
IPI:IPI00776026 IPI:IPI00845638 RefSeq:NP_780519.3 UniGene:Mm.32959
ProteinModelPortal:Q4VA53 SMR:Q4VA53 STRING:Q4VA53
PhosphoSite:Q4VA53 PaxDb:Q4VA53 PRIDE:Q4VA53
Ensembl:ENSMUST00000016569 Ensembl:ENSMUST00000110486 GeneID:100710
KEGG:mmu:100710 UCSC:uc009auh.1 UCSC:uc009aui.1 UCSC:uc009auj.1
InParanoid:Q4VA53 NextBio:354602 Bgee:Q4VA53 Genevestigator:Q4VA53
Uniprot:Q4VA53
Length = 1446
Score = 492 (178.3 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 157/588 (26%), Positives = 275/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSA 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + W+ K+L Y +E + + P +R++ +++
Sbjct: 425 AGKDAAKQISWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P
Sbjct: 485 DLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLG 588
Score = 246 (91.7 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 90/402 (22%), Positives = 175/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S ++KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + V L+F++ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ D ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDTKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
>ZFIN|ZDB-GENE-040426-1612 [details] [associations]
symbol:pds5a "PDS5, regulator of cohesion
maintenance, homolog A (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR016024
ZFIN:ZDB-GENE-040426-1612 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GeneTree:ENSGT00390000012488 EMBL:CR759875
IPI:IPI00829298 Ensembl:ENSDART00000126785 ArrayExpress:F1QDE7
Bgee:F1QDE7 Uniprot:F1QDE7
Length = 1321
Score = 485 (175.8 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 149/571 (26%), Positives = 269/571 (47%)
Query: 12 VGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKD 71
+G K T + D +VK LK +++Q + + L+ + L++ +KD
Sbjct: 23 LGVKEITDKISNDEVVKRLKLVVKTYMDMDQDSEEEKQQYLALALH-LASEFFLRNPNKD 81
Query: 72 VKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETL 130
V+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R +LE L
Sbjct: 82 VRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENL 141
Query: 131 AKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDL 189
A +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++L
Sbjct: 142 AWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQEL 201
Query: 190 L-VILLSALGRNKN------DTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSH 242
L IL++ + +KN D AR L ++ + + Q LV S S H
Sbjct: 202 LDTILINLIPAHKNLNKQAYDLARTLLKRTVQTIETCIASFFNQVLVMGKSSVSDLSE-H 260
Query: 243 IDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFH 302
+ ++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 261 V--FDLIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVVKLLAKLFGAKDSELATQNR 318
Query: 303 SVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQ 361
++ FL R D V VR+ ++ CL+ P A D + L R D +E +R
Sbjct: 319 PLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHD 375
Query: 362 VVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSIN 421
V+ I + LN + + + V ER+ DK V++ M LA +F+ CL + G +
Sbjct: 376 VIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMMGLAQLFKKYCLHHEAGKES 435
Query: 422 QNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM 480
+ WI K+L Y +E + + P +++++ +++ D +
Sbjct: 436 ALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLETEEKMKCLYYLYACLDTNAV 495
Query: 481 KALEKILEQKQRLQQEMQRYLSLRQMH-QDGDAPEIQKKILFCFRVMSRSFAEPAKAEEN 539
KAL ++ + + L+ ++ L L ++ + + + K++ ++++ +P KA++
Sbjct: 496 KALNEMWKCQNMLRGLVRELLDLHKLPTSEANTSAMFGKLM----TIAKNLPDPGKAQDF 551
Query: 540 FLILDQL--KDANVWKILMNLLDSNTSFDQA 568
+Q+ +D + L L+ S QA
Sbjct: 552 MKKFNQVLGEDEKLRLQLEQLISPTCSCKQA 582
Score = 249 (92.7 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 106/442 (23%), Positives = 194/442 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I +L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 690 VAEAAIQIFRNTGQKIETELPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFHNKEVQ 749
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 750 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSIVANFIVKDLLMNDR 808
Query: 779 -IRNDTKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ N W DD S L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 809 SVGNKNGRLWTADDEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 867
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E + S D + LRLA+ A+L+L+++ + I + F L Q +++
Sbjct: 868 GDLTEQKKISKSDMSRLRLAAGSAILKLAQEPCYHDIITPEQFQLCGLVINDECYQVRQI 927
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
+ K+H + LL +Y F +K P +E + + + + ++ I
Sbjct: 928 YAQKLHVALVKLLLPLEYMAVFALC---AKDP-VKERRAHARQCLLKNISVRREYIKQNP 983
Query: 952 DANS--FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDV 1009
A+ + PEY++PY++H AH PD+ + +D++ V L+F++ +L+ K+E+
Sbjct: 984 MAHEKLLSLLPEYVVPYMIHLLAHD--PDLTKPQDLEQLRDVKECLWFMLEVLMTKNENN 1041
Query: 1010 KSEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI--TKRLSRMEDNSQG 1067
K +C +D A K + +CD+ L + K S D+ +
Sbjct: 1042 SHSFLRK--MVENIKQTKDAQCPDD--PKANEK-LYIVCDVALFVIANKSTSCHLDSPKD 1096
Query: 1068 VFSSVSLPSTLYKPYEKKEGDD 1089
LPS Y P +K+ +D
Sbjct: 1097 PV----LPSKFYTPPDKEFVND 1114
Score = 45 (20.9 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 25/123 (20%), Positives = 44/123 (35%)
Query: 518 KILFCFRVMSRSFAEPAKAEE-N--FLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDD 574
K +F F E K+ + N F +L+ L + I L D N F Q F
Sbjct: 110 KEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFK---T 166
Query: 575 LLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGI 634
L ++ H + L + S ++ +E+L + A+ + D+
Sbjct: 167 LFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLART 226
Query: 635 LAR 637
L +
Sbjct: 227 LLK 229
>RGD|1310838 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance, homolog B
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=ISO;ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISO;IDA] [GO:0042127 "regulation of
cell proliferation" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 RGD:1310838
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677
GO:GO:0007064 HOVERGEN:HBG108241 eggNOG:NOG268017
HOGENOM:HOG000230672 EMBL:AABR03082233 EMBL:AABR03082545
EMBL:AY388627 EMBL:AY820182 EMBL:AY820183 EMBL:AY831451
EMBL:AY831452 EMBL:AY836673 IPI:IPI00515846 IPI:IPI00562353
IPI:IPI00764370 UniGene:Rn.105768 ProteinModelPortal:Q6TRW4
STRING:Q6TRW4 PhosphoSite:Q6TRW4 PRIDE:Q6TRW4 UCSC:RGD:1310838
ArrayExpress:Q6TRW4 Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 489 (177.2 bits), Expect = 2.8e-62, Sum P(3) = 2.8e-62
Identities = 157/588 (26%), Positives = 275/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSA 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + W+ K+L Y +E + + P +R++ +++
Sbjct: 425 AGKDAAKQICWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P
Sbjct: 485 DLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLG 588
Score = 246 (91.7 bits), Expect = 2.8e-62, Sum P(3) = 2.8e-62
Identities = 90/402 (22%), Positives = 175/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S ++KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + V L+F++ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ D ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDTKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 2.8e-62, Sum P(3) = 2.8e-62
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
>UNIPROTKB|Q6TRW4 [details] [associations]
symbol:Pds5b "Sister chromatid cohesion protein PDS5
homolog B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 RGD:1310838 GO:GO:0005634 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AABR03082233 EMBL:AABR03082545 EMBL:AY388627 EMBL:AY820182
EMBL:AY820183 EMBL:AY831451 EMBL:AY831452 EMBL:AY836673
IPI:IPI00515846 IPI:IPI00562353 IPI:IPI00764370 UniGene:Rn.105768
ProteinModelPortal:Q6TRW4 STRING:Q6TRW4 PhosphoSite:Q6TRW4
PRIDE:Q6TRW4 UCSC:RGD:1310838 ArrayExpress:Q6TRW4
Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 489 (177.2 bits), Expect = 2.8e-62, Sum P(3) = 2.8e-62
Identities = 157/588 (26%), Positives = 275/588 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E
Sbjct: 308 ASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEE 364
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I A + + + V ER DK V++ M LA I++ L++
Sbjct: 365 AIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSA 424
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + W+ K+L Y +E + + P +R++ +++
Sbjct: 425 AGKDAAKQICWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATL 484
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPA 534
D +KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P
Sbjct: 485 DLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPG 540
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 541 KAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLG 588
Score = 246 (91.7 bits), Expect = 2.8e-62, Sum P(3) = 2.8e-62
Identities = 90/402 (22%), Positives = 175/402 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E L + G I E S++ +L +G RQAKYA+H + AI +
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ 743
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
+ +++ L L+ HL L ++G IA A F L +++
Sbjct: 744 -FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR 802
Query: 779 IRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYG 834
+ T W D+ S ++KI IK +V+ L +K+ H + G L + + S G
Sbjct: 803 LPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG 862
Query: 835 EMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLF 892
+++E + S D + LRLA+ A+++L+++ + I ++ + L Q +++F
Sbjct: 863 DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF 922
Query: 893 LSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSD 952
K+H+ + L +Y + +Q L I + + + +V
Sbjct: 923 AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEK 982
Query: 953 ANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSE 1012
S PEY++PY +H AH PD + +D++ + V L+F++ +L+ K+E+ S
Sbjct: 983 LLSLL--PEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN-NSH 1037
Query: 1013 ASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
A ++ K ++ D ++ + +CD+ ++I
Sbjct: 1038 AFIRKMVENIKQT----KDAQGPDDTKMNEKLYTVCDVAMNI 1075
Score = 49 (22.3 bits), Expect = 2.8e-62, Sum P(3) = 2.8e-62
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
>ZFIN|ZDB-GENE-091217-2 [details] [associations]
symbol:pds5b "PDS5, regulator of cohesion
maintenance, homolog B (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 ZFIN:ZDB-GENE-091217-2
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:CR855379
EMBL:CT027778 EMBL:CU369047 IPI:IPI00501181
Ensembl:ENSDART00000087246 Uniprot:E7EXW9
Length = 1415
Score = 490 (177.5 bits), Expect = 4.9e-62, Sum P(3) = 4.9e-62
Identities = 157/587 (26%), Positives = 272/587 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSAQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL-VILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L++ + +N N A LA ++++ A +E I F M G +
Sbjct: 190 SVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSVS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ D RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDNHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENV 358
Q ++ +L R D V VR+ ++ CL+ P A D + L R D +E +
Sbjct: 310 QNKPLWQCYLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAI 366
Query: 359 RKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNG 418
R V+ I + L+ + + V ER DK V++ M LA I++ L+ G
Sbjct: 367 RHDVIVSIVTASKKDLSLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQAEAG 426
Query: 419 SINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDR 477
+ WI K+L Y +E + L P +R++ +++ D
Sbjct: 427 KEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYLVPHNLETTERMKCLYYLYATLDG 486
Query: 478 IEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKA 536
+KAL ++ + + L+ ++ L L +Q D + K++ V++R+ +P K
Sbjct: 487 NAVKALNEMWKCQNMLRHHVKDLLDLVKQPKSDSYNKAVFSKVM----VITRNLPDPGKT 542
Query: 537 EENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGA 581
++ L Q+ +D + K L L+ + S QA ++ K LG+
Sbjct: 543 QDFVKKLAQVLEEDEKIRKQLETLVSPSCSCKQAEVCVKEITKKLGS 589
Score = 248 (92.4 bits), Expect = 4.9e-62, Sum P(3) = 4.9e-62
Identities = 95/405 (23%), Positives = 178/405 (43%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAI--TKDDG 718
+ E L + G + + S + +L+ +G RQAKYA+H + A+ +D
Sbjct: 684 VAEAALQIFKNTGNKLEDSFPHIKSVLLPVLQHKAKKGPPRQAKYAIHCIHAMFSNRDTH 743
Query: 719 LKSL-SVLYKRL-VDMLEEKTHLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCS 776
+ L+K L D +E+ L L +LG +A A F L +
Sbjct: 744 FAQIFEPLHKGLDTDNMEQ---LITPLTTLGHLAMLAPEQFAAPLKSLVANFIVKDLLMN 800
Query: 777 NKIRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLS 832
++I T W DD S KI G+K +V+ L VK+ + G + L +L ++LS
Sbjct: 801 DRIPGKKTTKLWVPDDEVSPETSAKIQGLKLMVRWLLGVKNNQSKSG-NSTLRMLTAILS 859
Query: 833 Y-GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAK 889
G+++E + D + LRLA+ A+LRL+++ + I ++ + L Q +
Sbjct: 860 SDGDLTEQGKMGKPDMSRLRLAAGCAILRLAQEPCYHEIITLEQYQLCALVINDECYQVR 919
Query: 890 KLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISV 949
+ F K+H+ + L +Y F + +Q L I + + + +V
Sbjct: 920 QAFAQKLHKGLCRLRLPLEYLAVFTLCAKDPVKERRAHARQCLVKNINLRREYLKQHAAV 979
Query: 950 QSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDV 1009
S PEY++PY +H H PD + +D++ + + L+F++ +L+ K+E+
Sbjct: 980 SEKLISLL--PEYVVPYAIHLLVHD--PDYVKVQDIEQLKDIKEALWFVLEILMAKNEN- 1034
Query: 1010 KSEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
S A ++ +C +D A ++ + +CD+ ++I
Sbjct: 1035 NSHAFIRKMVENIKQTKDG-QCPDD---AKINEKLYTVCDVAMNI 1075
Score = 43 (20.2 bits), Expect = 4.9e-62, Sum P(3) = 4.9e-62
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D +QA +LLK+L H + + T L + E V E L++
Sbjct: 637 DEGVPTEQAIRAGLELLKVLSFTHPVSFHSAETFESLLGCLKMDDEKVAEAALQI 691
>UNIPROTKB|Q4QXM3 [details] [associations]
symbol:pds5a-a "Sister chromatid cohesion protein PDS5
homolog A-A" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
EMBL:AY695731 UniGene:Xl.76790 ProteinModelPortal:Q4QXM3
IntAct:Q4QXM3 PRIDE:Q4QXM3 Xenbase:XB-GENE-5812802
HOVERGEN:HBG108241 Uniprot:Q4QXM3
Length = 1323
Score = 487 (176.5 bits), Expect = 9.1e-62, Sum P(3) = 9.1e-62
Identities = 157/589 (26%), Positives = 269/589 (45%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T + D +VK LK +++Q + + P + L++ +KDV
Sbjct: 20 GVKEITDKISNDEVVKRLKMVVKTYMDMDQDSEEEKQQYL-PLALHLSSEFFLRNPNKDV 78
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R +LE LA
Sbjct: 79 RLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 138
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDI-QEDL 189
+S + +LE C+E+ +++ T F+V ++ H + V M +M + E + + QE L
Sbjct: 139 WVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQL 198
Query: 190 LVILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHIDYH 246
IL++ + +N N A LA ++++ A +E I F + G S
Sbjct: 199 DSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSVSDLSEHVF 258
Query: 247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFS 306
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 259 DLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQ 318
Query: 307 EFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVAV 365
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 319 CFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHDVIVT 375
Query: 366 ICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEF 425
I A L + + + V ER DK V++ M LA +++ CL G +
Sbjct: 376 IITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEGGKDAAEKV 435
Query: 426 EWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALE 484
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 436 SWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLDPNAVKALN 495
Query: 485 KILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLIL 543
++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 496 EMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGKAQDFVKKF 551
Query: 544 DQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFL 589
+Q+ +D + L L+ + S QA RD K+ K FL
Sbjct: 552 NQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFL 600
Score = 228 (85.3 bits), Expect = 9.1e-62, Sum P(3) = 9.1e-62
Identities = 101/434 (23%), Positives = 185/434 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + +I + ++
Sbjct: 686 VAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRGTPHQAKQAVHCIHSIFSNKEVQ 745
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 746 -LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 804
Query: 779 IRNDTKA---CWDDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
D C D+ S L K IK LV+ L +K+ + + L +L +ML S
Sbjct: 805 SNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 863
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 864 GDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 923
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + L +Y F + +Q L I + + +Q V S
Sbjct: 924 FAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPV-S 981
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD + +D+ ++ C L+F++ +L+ K+E+
Sbjct: 982 NEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLRDIKEC-LWFMLEVLMTKNEN-N 1037
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ + D D ++ +CD+ L + S +S+
Sbjct: 1038 SHAFMKKLCENIKQTRDAQ--APD--DPKANEKLFTVCDVALCVVYNKSA-PCHSESSKD 1092
Query: 1071 SVSLPSTLYKPYEK 1084
V LP T + +K
Sbjct: 1093 PV-LPLTFFTQPDK 1105
Score = 62 (26.9 bits), Expect = 9.1e-62, Sum P(3) = 9.1e-62
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 1182 REINLDNLGVLNKFESSNGHKHFPSKQIKVDLENEEIKKRKATDVTSFPVPKRRRSLSAH 1241
+E+NLD N + G K + ++ E +++KA ++++ P PK RR
Sbjct: 1206 KEVNLDQTAPSNT-GTERGKKRSAASAGAENIRKES-EEKKADNISATPTPKPRRG---- 1259
Query: 1242 GGFRTPKSNSK 1252
R PKS S+
Sbjct: 1260 ---RPPKSESQ 1267
Score = 37 (18.1 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 296 ANNEQFHSVFSEFLKRLTDRIVAVRM 321
AN +Q + F E +K L +RI V +
Sbjct: 590 ANPKQPTNPFLEMVKFLLERIAPVHI 615
>UNIPROTKB|Q4KLU7 [details] [associations]
symbol:pds5a-b "Sister chromatid cohesion protein PDS5
homolog A-B" species:8355 "Xenopus laevis" [GO:0008156 "negative
regulation of DNA replication" evidence=ISS] InterPro:IPR016024
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
UniGene:Xl.76790 Xenbase:XB-GENE-5812802 HOVERGEN:HBG108241
EMBL:BC098992 RefSeq:NP_001090063.1 ProteinModelPortal:Q4KLU7
PRIDE:Q4KLU7 GeneID:735137 KEGG:xla:735137 CTD:23244 KO:K11267
Uniprot:Q4KLU7
Length = 1323
Score = 488 (176.8 bits), Expect = 1.9e-61, Sum P(3) = 1.9e-61
Identities = 157/589 (26%), Positives = 269/589 (45%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T + D +VK LK +++Q + + P + L++ +KDV
Sbjct: 20 GVKEITDKISNDEVVKRLKMVVKTFMDMDQDSEEEKQQYL-PLALHLSSDFFLRNPNKDV 78
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R +LE LA
Sbjct: 79 RLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 138
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDI-QEDL 189
+S + +LE C+E+ +++ T F+V ++ H + V M +M + E + + QE L
Sbjct: 139 WVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQL 198
Query: 190 LVILLSALG--RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHIDYH 246
IL++ + +N N A LA ++++ A +E I F + G S
Sbjct: 199 DSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSVSDLSEHVF 258
Query: 247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFS 306
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 259 DLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQ 318
Query: 307 EFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVAV 365
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 319 CFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHDVIVT 375
Query: 366 ICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEF 425
I A L + + + V ER DK V++ M LA +++ CL G +
Sbjct: 376 IITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEGGKDAAEKV 435
Query: 426 EWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALE 484
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 436 SWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLDPNAVKALN 495
Query: 485 KILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLIL 543
++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 496 EMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGKAQDFVKKF 551
Query: 544 DQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFL 589
+Q+ +D + L L+ + S QA RD K+ K FL
Sbjct: 552 NQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFL 600
Score = 228 (85.3 bits), Expect = 1.9e-61, Sum P(3) = 1.9e-61
Identities = 101/434 (23%), Positives = 185/434 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + +I + ++
Sbjct: 686 VAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRGTPHQAKQAVHCIHSIFSNKEVQ 745
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 746 -LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 804
Query: 779 IRNDTKA---CWDDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
D C D+ S L K IK LV+ L +K+ + + L +L +ML S
Sbjct: 805 SNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 863
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 864 GDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 923
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + L +Y F + +Q L I + + +Q V S
Sbjct: 924 FAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPV-S 981
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD + +D+ ++ C L+F++ +L+ K+E+
Sbjct: 982 NEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLRDIKEC-LWFMLEVLMTKNEN-N 1037
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ + D D ++ +CD+ L + S +S+
Sbjct: 1038 SHAFMKKLCENIKQTRDAQ--APD--DPKANEKLFTVCDVALCVVYNKSA-PCHSESSKD 1092
Query: 1071 SVSLPSTLYKPYEK 1084
V LP T + +K
Sbjct: 1093 PV-LPLTFFTQPDK 1105
Score = 58 (25.5 bits), Expect = 1.9e-61, Sum P(3) = 1.9e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 1182 REINLDNLGVLNKFESSNGHKHFPSKQIKVDLENEEIKKRKATDVTSFPVPKRRRSLSAH 1241
+E+NLD N + G K + ++ E +++K ++++ P PK RR
Sbjct: 1206 KEVNLDQTAPSNT-GTERGKKRSAASAGAENIRKES-EEKKVDNISATPTPKPRRG---- 1259
Query: 1242 GGFRTPKSNSK 1252
R PKS S+
Sbjct: 1260 ---RPPKSESQ 1267
Score = 37 (18.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 296 ANNEQFHSVFSEFLKRLTDRIVAVRM 321
AN +Q + F E +K L +RI V +
Sbjct: 590 ANPKQPTNPFLEMVKFLLERIAPVHI 615
>UNIPROTKB|Q498H0 [details] [associations]
symbol:pds5b-a "Sister chromatid cohesion protein PDS5
homolog B-A" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC100220 EMBL:AY695732 RefSeq:NP_001089658.1 UniGene:Xl.51523
ProteinModelPortal:Q498H0 IntAct:Q498H0 GeneID:734718
KEGG:xla:734718 CTD:734718 Xenbase:XB-GENE-6255297 Uniprot:Q498H0
Length = 1448
Score = 473 (171.6 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 155/587 (26%), Positives = 271/587 (46%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKEQYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL ++ L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG--KTS 247
Query: 240 HSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
S + H ++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 248 ISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSEL 307
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDEN 357
Q +++ +L R D V VR+ ++ L+ P A + L R D +E
Sbjct: 308 ASQNKTLWQCYLGRFNDIHVPVRLECVKFASHSLVNHPDLAK--DLTDYLKVRSHDPEEA 365
Query: 358 VRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFN 417
+R V+ I A L + + + V ER DK V++ M LA I++ L+
Sbjct: 366 IRHDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQAEA 425
Query: 418 GSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFD 476
G + + WI K+L Y +E + + P +R++ +++ D
Sbjct: 426 GKESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLD 485
Query: 477 RIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAK 535
+KAL ++ + + L+ ++ L L ++ + + I K++ V++R+ +P K
Sbjct: 486 TNAVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITRNLPDPGK 541
Query: 536 AEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG 580
++ Q+ D + L L+ S QA D+ K LG
Sbjct: 542 GQDFLKKFTQVLEDDEKIRGQLEKLVSPTCSCKQAEVCVRDITKKLG 588
Score = 254 (94.5 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 96/404 (23%), Positives = 183/404 (45%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAI--TKDDG 718
+ E L + G I E S++ +L++ +G RQAKY++H + AI +K+
Sbjct: 684 VAEAALQIFKNTGSKIEEDFPHIRSALLPVLQQKAKKGPPRQAKYSIHCIQAIFSSKETQ 743
Query: 719 LKSL-SVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSN 777
+ L+K L E+ L L S+G IAQ A F L ++
Sbjct: 744 FAQIFEPLHKSLDPGNPEQ--LITSLVSIGHIAQLAPDQFTAPLKSMVATFVVKDLLMTD 801
Query: 778 KIRND-TKACW--DDR-SELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-S 832
++ T W DD S +KI IK +V+ L +K+ + G + L +L ++L +
Sbjct: 802 RLPGKKTTKLWVSDDEVSTETKVKIQAIKMMVRWLLGMKNNLSKSG-NSTLRLLMAILHT 860
Query: 833 YGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKK 890
G+++E + S D + LRLA+A A+++L+++ + I ++ + L Q ++
Sbjct: 861 DGDLTEHGKLSKPDMSRLRLAAASAIVKLAQEPCYHEIITLEQYQLCALVINDECYQVRQ 920
Query: 891 LFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQ 950
LF K+H+ + L +Y + +Q L I + + + +V
Sbjct: 921 LFAQKIHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVS 980
Query: 951 SDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVK 1010
F+ PEY++PY VH AH PD + +D++ + + L+F++ +L+ K+E+
Sbjct: 981 EKL--FSLLPEYVVPYTVHLLAHD--PDYVKVQDIEQLKDIKECLWFVLEILMSKNEN-N 1035
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI 1054
S A ++ K ++ D ++ + +CD+ ++I
Sbjct: 1036 SHAFIRKMVEYIKQT----KDGQNPDDQKMNEKMYTVCDVAMNI 1075
Score = 51 (23.0 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 560 DSNTSFDQAFTGRDDLLKILGAKHRL-YDFLSTLSMKCSYLLFNKEHVKEILLEV 613
D + DQA +LLK+L H + + T + L + E V E L++
Sbjct: 637 DEGVTTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQI 691
Score = 37 (18.1 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1340 KNSDMLSKSPVGSAKKRKRRSIAGLAK 1366
+N D SP+ S KK +R + L K
Sbjct: 1183 ENEDYTMSSPL-SGKKSDKRDDSDLLK 1208
>UNIPROTKB|I3LU95 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:FP326671 Ensembl:ENSSSCT00000029818 Uniprot:I3LU95
Length = 1291
Score = 469 (170.2 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 150/549 (27%), Positives = 258/549 (46%)
Query: 54 PFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGL 112
P + L++ +KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL
Sbjct: 22 PLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGL 81
Query: 113 KDTGGPSFGRRVVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSM 171
+DT P F R +LE LA +S + +LE C+E+ +++ T F+V ++ H + V M
Sbjct: 82 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHM 141
Query: 172 QTIMIVLLEESEDIQEDLL-VILLSALGRNKNDTARR--LAMNVIEQCAGKLEAGIKQFL 228
+M ++ E + + ++LL IL++ + +KN + LA ++++ +EA I F
Sbjct: 142 LDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFF 201
Query: 229 VSSMSGDSRPGHSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 286
+ + R S + H ++I +++ P +L V+P L +L ++ + RL V L+
Sbjct: 202 -NQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLL 260
Query: 287 GDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILT 345
LF S Q ++ FL R D V VR+ ++ CL+ P A D + L
Sbjct: 261 AKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLK 320
Query: 346 ALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLA 405
R D +E +R V+ I A L + + + V ER DK V++ M LA
Sbjct: 321 V---RSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLA 377
Query: 406 DIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDR 464
+++ CL G + WI K+L Y +E + L P ++R
Sbjct: 378 QLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEER 437
Query: 465 VRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCF 523
++ +++ D +KAL ++ + + L+ ++ L L +Q + + + K++
Sbjct: 438 MKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM--- 494
Query: 524 RVMSRSFAEPAKAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILG 580
++++ +P KA++ +Q L D + + LL S T S QA R+ K+
Sbjct: 495 -TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLAN 553
Query: 581 AKHRLYDFL 589
K FL
Sbjct: 554 PKQPTNPFL 562
Score = 245 (91.3 bits), Expect = 2.0e-60, Sum P(2) = 2.0e-60
Identities = 104/445 (23%), Positives = 190/445 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 648 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQ 707
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 708 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 766
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 767 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 825
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 826 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 885
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y F + +Q L I + + +Q + +
Sbjct: 886 FAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPMAT 944
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD +DV ++ C L+F++ +L+ K+E+
Sbjct: 945 E-KLLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIKEC-LWFMLEVLMTKNEN-N 999
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ S D ++ ++ + +CD+ L + S + N+
Sbjct: 1000 SHAFMKKMAENIKLTKDAQ--SPD--ESKTNEKLYTVCDVALCVINSKSAL-CNADSPKD 1054
Query: 1071 SVSLPSTLYKPYEKKE-GDDSLASE 1094
V LP + EK D S SE
Sbjct: 1055 PV-LPMKFFTQPEKDFCNDKSYISE 1078
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 296 ANNEQFHSVFSEFLKRLTDRIVAVRM 321
AN +Q + F E +K L +RI V +
Sbjct: 552 ANPKQPTNPFLEMVKFLLERIAPVHI 577
>UNIPROTKB|E1BKG4 [details] [associations]
symbol:E1BKG4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:DAAA02017473 EMBL:DAAA02017474 EMBL:DAAA02017475
EMBL:DAAA02017476 EMBL:DAAA02017477 EMBL:DAAA02017478
EMBL:DAAA02017479 EMBL:DAAA02017480 IPI:IPI00715373
Ensembl:ENSBTAT00000023680 Uniprot:E1BKG4
Length = 1295
Score = 393 (143.4 bits), Expect = 2.8e-52, Sum P(2) = 2.8e-52
Identities = 139/553 (25%), Positives = 257/553 (46%)
Query: 54 PFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGL 112
P + L++ +KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL
Sbjct: 24 PLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGL 83
Query: 113 KDTGGPSFGRRVVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSM 171
+DT P F R +LE LA +S + +LE C+E+ +++ T F+V ++ H + V M
Sbjct: 84 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHM 143
Query: 172 QTIMIVLLEESEDIQEDLL-VILLSALGRNKNDTARR--LAMNVIEQCAGKLEAGIKQFL 228
+M ++ E + + ++LL IL++ + +KN + LA ++++ +EA I F
Sbjct: 144 LDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFF 203
Query: 229 VSSMSGDSRPGHSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 286
+ + R S + H ++I +++ P +L V+P L +L + RLK+V +
Sbjct: 204 -NQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKDNHTQERLKSV--I 260
Query: 287 GDLFAVPGSANNEQF----HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAP 341
LF++ ++ ++ F+ R D V VR+ ++ CL+ P A D
Sbjct: 261 KLLFSLLSERDSNIVATAKRAITVCFVYRFNDIHVPVRLESVKFASHCLMNHPDLAKDLT 320
Query: 342 QILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTM 401
+ L + L + R QV+ + + ++ + ++ + + K V++ M
Sbjct: 321 EYLVV--NYHLPSPQT-RFQVLPFLLLLPFRNISLLLLKKIAFLNFVFSKKWWRVRKEAM 377
Query: 402 ERLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFS 460
LA +++ CL G + WI K+L Y +E + L P
Sbjct: 378 MGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLE 437
Query: 461 VKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKI 519
++R++ +++ D +KAL ++ + + L+ ++ L L +Q + + + K+
Sbjct: 438 TEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKL 497
Query: 520 LFCFRVMSRSFAEPAKAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLL 576
+ ++++ +P KA++ +Q L D + + LL S T S QA R+
Sbjct: 498 M----TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIAR 553
Query: 577 KILGAKHRLYDFL 589
K+ K FL
Sbjct: 554 KLANPKQPTNPFL 566
Score = 246 (91.7 bits), Expect = 2.8e-52, Sum P(2) = 2.8e-52
Identities = 104/445 (23%), Positives = 191/445 (42%)
Query: 661 IKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLK 720
+ E + + G I L S++ +L + G+ QAK AVH + AI + ++
Sbjct: 652 VAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQ 711
Query: 721 SLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
L+ +++ L L L L SLG I+ A F + L +++
Sbjct: 712 -LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDR 770
Query: 779 IRNDTKA-CWDDRSELC---LLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SY 833
+ W E+ L K+ IK LV+ L +K+ + + L +L +ML S
Sbjct: 771 STGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSE 829
Query: 834 GEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKL 891
G+++E S D + LRLA+ A+++L+++ + I + F L Q +++
Sbjct: 830 GDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQI 889
Query: 892 FLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQS 951
F K+H+ + LL +Y F + +Q L I + + +Q + +
Sbjct: 890 FAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREY-IKQNPMAT 948
Query: 952 DANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF-ELVYCRLYFIVSMLIHKDEDVK 1010
+ + PEY++PY++H AH PD +DV ++ C L+F++ +L+ K+E+
Sbjct: 949 E-KLLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIKEC-LWFMLEVLMTKNEN-N 1003
Query: 1011 SEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFS 1070
S A K+ S D ++ ++ + +CD+ L + S + N++
Sbjct: 1004 SHAFMKKMAENIKLTKDAQ--SPD--ESKTNEKLYTVCDVALCVINSKSAL-CNAESPKD 1058
Query: 1071 SVSLPSTLYKPYEKKE-GDDSLASE 1094
V LP + EK D S SE
Sbjct: 1059 PV-LPVKFFTQPEKDFCNDKSYISE 1082
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 296 ANNEQFHSVFSEFLKRLTDRIVAVRM 321
AN +Q + F E +K L +RI V +
Sbjct: 556 ANPKQPTNPFLEMVKFLLERIAPVHI 581
>TAIR|locus:2116787 [details] [associations]
symbol:AT4G31880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] GO:GO:0005829 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:NOG12793 UniGene:At.31705
EMBL:BT002315 IPI:IPI00525095 RefSeq:NP_194916.2 PaxDb:Q8GUP3
PRIDE:Q8GUP3 EnsemblPlants:AT4G31880.1 GeneID:829318
KEGG:ath:AT4G31880 TAIR:At4g31880 HOGENOM:HOG000148306
InParanoid:Q8GUP3 OMA:IATEEVS PhylomeDB:Q8GUP3
ProtClustDB:CLSN2716612 Genevestigator:Q8GUP3 Uniprot:Q8GUP3
Length = 873
Score = 518 (187.4 bits), Expect = 4.6e-49, Sum P(2) = 4.6e-49
Identities = 107/231 (46%), Positives = 150/231 (64%)
Query: 3 EKLEQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQP 62
++LE Q+ E G KL PPS+ D L+ L + L+E+ QSPP S+ A+ P + +V
Sbjct: 6 KELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMKGLVGG 65
Query: 63 VLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGR 122
L KH D DVK+ VA CI EITRITAP+APY DD +K++F+LIV +F L D S+ +
Sbjct: 66 KLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSSRSYAK 125
Query: 123 RVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEES 182
R+ ILET+AK RSCVVMLDLECD L+ EM+ F D H +V SSM+ IM ++LEES
Sbjct: 126 RISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTLVLEES 185
Query: 183 EDIQEDLLVILLSALGRNK--NDTARRLAMNVIEQCAGKLEAGIKQFLVSS 231
EDI ++L +L ++ ++ + +RRLA V+ CA KL+ + + + SS
Sbjct: 186 EDIPSEMLSPILHSVKKDDEISQVSRRLAEQVLSNCASKLKTYLTEAVKSS 236
Score = 76 (31.8 bits), Expect = 4.6e-49, Sum P(2) = 4.6e-49
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 1345 LSKSPVGSAKKRKRRSIAGLAKCTTKNAGVNIEDLIGYRIKVWWPMDK 1392
+ +SP S KRKR G K +G E L+G RIKVWWPMD+
Sbjct: 584 VEESP-NSNTKRKRSLGQG------KASG---ESLVGSRIKVWWPMDQ 621
>POMBASE|SPAC110.02 [details] [associations]
symbol:pds5 "cohesin-associated protein Pds5"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IGI] [GO:0030892 "mitotic cohesin complex" evidence=IGI]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IMP]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IMP] [GO:0072356 "chromosome passenger complex
localization to kinetochore" evidence=IMP] [GO:2000281 "regulation
of histone H3-T3 phosphorylation" evidence=IDA] [GO:2000817
"regulation of histone H3-T3 phosphorylation involved in chromosome
passenger complex localization to kinetochore" evidence=IMP]
InterPro:IPR016024 PomBase:SPAC110.02 EMBL:CU329670 SUPFAM:SSF48371
GO:GO:0000775 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0006974 GO:GO:0000070 GO:GO:0000794
GO:GO:0071459 GO:GO:0051455 GO:GO:0007062 GO:GO:0030892 KO:K11267
eggNOG:NOG268017 EMBL:AB067651 EMBL:AF049529 PIR:T43647
RefSeq:NP_593535.1 ProteinModelPortal:Q9HFF5 IntAct:Q9HFF5
STRING:Q9HFF5 EnsemblFungi:SPAC110.02.1 GeneID:2541628
KEGG:spo:SPAC110.02 OMA:CESATMR OrthoDB:EOG44XNR4 NextBio:20802721
GO:GO:2000817 Uniprot:Q9HFF5
Length = 1205
Score = 387 (141.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 186/828 (22%), Positives = 341/828 (41%)
Query: 205 ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSH-------IDYHEVIYDVYRCSP 257
A +LA N+ A +L+ + Q+ S + DSR S I H ++ +++ +P
Sbjct: 214 AFQLARNIFHDSADRLQRYVCQYF-SDIIFDSRDSLSDSMTTPEFIFSHNLVLQLWKYAP 272
Query: 258 QILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIV 317
L ++P EL +Q RL A+ VG + +A + V+S F RL D+ V
Sbjct: 273 TTLLNIIPQFENELQAEQTSVRLVAIETVG--LMLQDNAIWSDYPRVWSAFCGRLNDKSV 330
Query: 318 AVRMSVLEHVKSCLLTDPSRADAPQ-ILTALCDRLLDFDENVRKQVVAVICDVACHALN- 375
A R+ +E + L + ++ + ++ L +L D DE VR + I +
Sbjct: 331 ACRIKCIEVASNALQNSLATSEIIENVVQMLQSKLADTDEKVRVATLKTIEQLTFETFKM 390
Query: 376 SIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNG-SINQNEFEWIPGKILR 434
V+ +KL+ +RLRD+ + V+ + L+ I+ +G + F WIP +L
Sbjct: 391 QFSVQALKLMGDRLRDRKLNVRLQAIRTLSQIYNRAYQDLIDGVEYSIQMFSWIPSSLLE 450
Query: 435 CLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEK---ILEQKQ 491
Y D ++ + L S + R R+F KA+ +L+++
Sbjct: 451 VFYVNDETTNAAVEICMAELVLQYLSSDTQTR-LNRLFLSIKYFSEKAMRVFILLLQRQV 509
Query: 492 RLQQEMQRYLSLRQMHQ----DGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLK 547
+ + + Y+ + + D D I K+ ++S + P E F +L
Sbjct: 510 KYSELLNYYIECCKNYNGGVMDNDEESITNKLKKVIDIISSKSSNPTLTEATFRKFAELN 569
Query: 548 DANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKC--------SYL 599
D +K+L+ + + L K R+ + LST S++C +
Sbjct: 570 DRQSYKMLLQTFSIKSEYQVVLKSIKYLFK------RVSETLSTASLECFRIFVYRSALF 623
Query: 600 LFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTXXXXXXXXXXXXX 659
FNK +V EI+ + N F++ +L L P + G
Sbjct: 624 AFNKSNVHEIIQLLNEPVKYHN--FLKPSEALLQHLPLIHPNIYGEVVIEVENIIVSSGI 681
Query: 660 IIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGL 719
++ L++ ++ + +++ ++L +LCL G++ QAK A + AIT+
Sbjct: 682 ESDPKVIKALSQFSKR-KKNFSIQTTTAEIL-RKLCLHGTQEQAKQAA-TIIAITETKEF 738
Query: 720 KSLSVLYKRLVDMLEEKTHLPAVLQSLGCI-AQTAMPVFETRXXXXXXXXXXXXLRCSNK 778
K L ++ +V+ LE LP L +LG + T V + R K
Sbjct: 739 K-LDMI-TNIVENLEYNGGLPVRLMTLGQLFLYTLEEVEKVADQVTEFLVKKVIQRFPEK 796
Query: 779 I---RNDTKAC-WDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGID-DLLGILKSML-S 832
ND + C ++ L + K+ I+ LV I ++ +LK +L +
Sbjct: 797 YDDTHNDEEWCTYEKLDNLTMCKVLAIRVLVNRLRAAAGGTEALNIGAPIIKLLKVLLMA 856
Query: 833 YGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDV---FHLTLRTPEISFPQAK 889
GE+S + + +A+LRL ++K L+L + +D ++L + +F +
Sbjct: 857 DGELSPFKNTPKISRAYLRLTASKYFLKLCSIPFYAEHIDFSSYVQISLLCQDENF-DVR 915
Query: 890 KLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISV 949
LFL+K+ + ++ + L Y LF +T + PE EE K + I+ Q++
Sbjct: 916 NLFLTKLQKQLQLKKLPISYY-PLLF-LT-AVDPE-EEIKTKASIWIRS-------QVAF 964
Query: 950 QSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELV-YCRLY 996
+ F EY+ YL+H +HH PDI + + + + Y R Y
Sbjct: 965 FQKTHDFTM--EYVATYLIHLLSHH--PDISSIESENSLDFIAYIRFY 1008
Score = 202 (76.2 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 65/225 (28%), Positives = 112/225 (49%)
Query: 28 KLLKQAATCLSELNQSPPASI-LEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRI 86
++LK+ L EL +I +++ P ++V LL H+DK ++ CI E+ R+
Sbjct: 22 EILKRLRDLLGELTSLSQDTIDRDSVLPVARSLVNNNLLHHKDKGIRSYTLCCIVELLRL 81
Query: 87 TAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDL-ECD 145
AP+AP++ L+DIFQ+I+ SGL + + + ILE+L+ +S V+++DL +
Sbjct: 82 CAPDAPFTLSQLEDIFQVILKILSGLMNQESTYYPQIYEILESLSNVKSAVLIVDLPNAE 141
Query: 146 ELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSAL--GRNKND 203
E + ++ FF +A ++V M I+ L+ E I L IL + L G+
Sbjct: 142 EFLVNIFRLFFDLARKGTTKNVEFYMLDIINQLINEINTIPAAALNILFAQLISGKGVRQ 201
Query: 204 T-----------ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSR 237
T A +LA N+ A +L+ + Q+ S + DSR
Sbjct: 202 TIGSSDSTNHGPAFQLARNIFHDSADRLQRYVCQYF-SDIIFDSR 245
Score = 65 (27.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 34/153 (22%), Positives = 68/153 (44%)
Query: 839 DIESSSVDKAHLRLASAKAVLRLSRQWDHK-IPVDVFHLTLRTPEISFPQAKKL--FLSK 895
D E KA + + S A + + + + + + HL P+IS +++ F++
Sbjct: 945 DPEEEIKTKASIWIRSQVAFFQKTHDFTMEYVATYLIHLLSHHPDISSIESENSLDFIAY 1004
Query: 896 VHQYVKDRLLDAKYACAFLFGITESKSPEFE--EEKQNLADIIQMHHQMKARQISVQSDA 953
+ YV D +++++ +F + + ++ E+ N ++ Q K Q+ Q+
Sbjct: 1005 IRFYV-DTVVNSENV-PIVFHLMQRIKQSYDVIEDGNNYIYVLSDMAQ-KILQVKSQNFG 1061
Query: 954 NSFATYPEYI-IPYLVHTFAHHSCPDIDECKDV 985
S TYP+ I +PY + P IDE K +
Sbjct: 1062 WSLTTYPKQIKLPYEIL----RPIPSIDEKKRI 1090
>FB|FBgn0260012 [details] [associations]
symbol:pds5 species:7227 "Drosophila melanogaster"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR016024
EMBL:AE013599 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005700 GO:GO:0030717 GO:GO:0007062
KO:K11267 eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OMA:NMIARRI
EMBL:BT053744 RefSeq:NP_001246271.1 RefSeq:NP_610719.1
UniGene:Dm.4304 IntAct:A1Z8S6 STRING:A1Z8S6
EnsemblMetazoa:FBtr0087974 EnsemblMetazoa:FBtr0306062 GeneID:36286
KEGG:dme:Dmel_CG17509 UCSC:CG17509-RA CTD:36286 FlyBase:FBgn0260012
OrthoDB:EOG402V70 ChiTaRS:pds5 GenomeRNAi:36286 NextBio:797748
Uniprot:A1Z8S6
Length = 1218
Score = 482 (174.7 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 158/615 (25%), Positives = 289/615 (46%)
Query: 24 DGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEI 83
D L++ LK A L ++Q ++ + P ++ ++H +DV+LL+A C+ ++
Sbjct: 20 DELIRRLKTLANVLQTMDQDD--NLYQQYIPLALHLLDDFFMQHPSRDVQLLIACCVADV 77
Query: 84 TRITAPEAPYSD-DVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDL 142
R+ APEAPY + D +K IF+ + GLKD PSF R +LE LA +S + +L
Sbjct: 78 LRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFNMCFEL 137
Query: 143 E-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL-VILLSALG-- 198
E C E+ +++ST F + +D H V + ++ L+ E++++ +LL +IL++ +
Sbjct: 138 EDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
Query: 199 RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHID--YHEVIYDVYRCS 256
++ N A +L ++ + LE+ IK F ++ D I +++IY++ R +
Sbjct: 198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLSITNKIYDIIYELNRIN 257
Query: 257 PQILSGVVPYLTGELL-TDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDR 315
+L V+P L +LL TD + RLKA L+ +F+ S +++ ++ F R D
Sbjct: 258 AGLLCSVLPQLENKLLSTDDAE-RLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDI 316
Query: 316 IVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALN 375
VR+ ++ LL PS I L R D DE VR +VV I + A
Sbjct: 317 TEPVRIKCVQSSMHFLLNHPSLQH--DITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFT 374
Query: 376 SI--PVETVKLVAERLRDKSVLVKRYTMERLADIF-RGCCLRNFNGSINQNEFEWIPGKI 432
+ + +++V ER DK ++R M LA I+ R C N + + +WI KI
Sbjct: 375 LVLEAPDLLEIVRERTLDKKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKI 434
Query: 433 LRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQ 491
L Y +E +L L P + ++R++ + D KA ++ + +
Sbjct: 435 LHGYYKVGLEDRLLVERLLITCLVPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQM 494
Query: 492 RLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFL-ILDQL-KDA 549
+ + + ++ L H P + ++ +++ +P KA E + L KDA
Sbjct: 495 KTRNTVSDWIKLH--HSKEFTPRVLSQLSAKQANIAKLLPDPLKAAEYLTQFSNNLRKDA 552
Query: 550 NVWKILMNLLDSNTSFDQAFTGRDDLLKILGA---KHRLYDFLSTLSMKCSYLLFNKEHV 606
+ + + +L + S + LLK LGA + Y+ + L + + ++ +KE +
Sbjct: 553 QLLRCINIVLKRDVSCRECADTMGVLLKKLGAHVQSNLYYNTVKMLIERVASVMVDKESI 612
Query: 607 KEI--LLEVAAQKSS 619
+ L+E +K S
Sbjct: 613 GVLISLIEQCIEKGS 627
Score = 70 (29.7 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 60/301 (19%), Positives = 116/301 (38%)
Query: 795 LLKIYGIKTLVKSYLPVK-DAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLA 853
L K+ +K + + L ++ D H +L + G++ +K+ LRL
Sbjct: 843 LCKLDALKAMARWLLGLRTDEHAAQKTFRMLAAFVNQR--GDLLGQNRLCGAEKSWLRLG 900
Query: 854 SAKAVLRLSRQ---WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA 910
+A A+L++ Q D L+ + P+ +++F K+H+ + R L
Sbjct: 901 AACAMLKVCEQKGVGDQYSAEQYLQLSQLMAD-PVPEVREIFARKLHKGLS-RSLPRNCL 958
Query: 911 CAFLFGITESKSPEFEEEKQNLA------DIIQMHHQMKARQISV---QSDANSFATYPE 961
G+ E E + Q+L D+ + +K ++ +++ S P+
Sbjct: 959 PLDFMGLYVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPD 1018
Query: 962 YIIPYLVHTFAHHSCPDIDECKD-VKAFELVYCRLYFIVSMLIHKDEDVKSEASNKEXXX 1020
Y++ + + H P +D V+ ++ C L FI+ L+ K E + K+
Sbjct: 1019 YMLAFAIPVLVHD--PRFTNHEDYVQLRKMEKC-LRFILEPLMAKRETFV-HSFYKQLLQ 1074
Query: 1021 XXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSIT-KRLSRMEDNSQGVFSSVSLPSTLY 1079
D D K A+CDL + I + S + N+ ++LP Y
Sbjct: 1075 LIKHREFSL--GSDKRDNYKM---WALCDLAMYIIDSKFSPFDGNTSTFSMPLALPEMYY 1129
Query: 1080 K 1080
K
Sbjct: 1130 K 1130
>TAIR|locus:2200557 [details] [associations]
symbol:AT1G15940 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR016024 EMBL:CP002684 GO:GO:0005829
GO:GO:0009506 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010924 HOGENOM:HOG000015164 ProtClustDB:CLSN2679925
IPI:IPI00543267 PIR:H86293 RefSeq:NP_173046.2 UniGene:At.28119
ProteinModelPortal:Q9S9P0 PRIDE:Q9S9P0 EnsemblPlants:AT1G15940.1
GeneID:838164 KEGG:ath:AT1G15940 TAIR:At1g15940 InParanoid:Q9S9P0
OMA:METIMIT PhylomeDB:Q9S9P0 Genevestigator:Q9S9P0 Uniprot:Q9S9P0
Length = 990
Score = 446 (162.1 bits), Expect = 7.3e-41, Sum P(2) = 7.3e-41
Identities = 96/229 (41%), Positives = 141/229 (61%)
Query: 6 EQQLKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLL 65
EQ L + L P + D + LL+ + L+ + Q +S+ +A+ P + A+V LL
Sbjct: 13 EQALTDAAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVSADLL 72
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVV 125
++ D DV++ V +C+ EI RITAPEAPY+D+ +KDIFQ+ + F L D S+ + V
Sbjct: 73 RNPDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYRKAEV 132
Query: 126 ILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDI 185
ILET+AK RS +VMLDLECD+LV EM+ F + DHP+ VL SM+TIMI +++ESE++
Sbjct: 133 ILETVAKVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDESEEV 192
Query: 186 QEDLLVILLSALGRNKNDT---ARRLAMNVIEQCAGKLEAGIKQFLVSS 231
DLL ILL+ + ++ D A L V+ C KL+ I + L SS
Sbjct: 193 PMDLLEILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCIMEALKSS 241
Score = 78 (32.5 bits), Expect = 7.3e-41, Sum P(2) = 7.3e-41
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 1347 KSPVGSAKKRKRRSIAGL-AKCTTKNAGVNIEDLIGYRIKVWWPMDKQ 1393
KS K + IAG + T G E+L+G R+ VWWP+DK+
Sbjct: 541 KSEQAPKSHPKMKRIAGEEVESNTNELG---EELVGKRVNVWWPLDKK 585
Score = 39 (18.8 bits), Expect = 7.6e-36, Sum P(3) = 7.6e-36
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1205 PSKQIKVDLENEEIKK 1220
P+ ++K D EN+E K
Sbjct: 847 PNAELKTDGENQEAAK 862
Score = 38 (18.4 bits), Expect = 7.6e-36, Sum P(3) = 7.6e-36
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 804 LVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSR 863
++KSY VK H D + L ++ ED S+S DK L S + R
Sbjct: 590 VIKSYCRVKKMHQVTYSDGDVEELNLKKERFKIIEDKSSASEDKEDDLLESTPLSAFIQR 649
Query: 864 QWDHK 868
+ K
Sbjct: 650 EKSKK 654
Score = 37 (18.1 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 919 ESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPE 961
++K E E K+ AD + + ++ + D ++++ PE
Sbjct: 911 KTKVEEKESAKEQTADTKLIEKEDMSKTKGEEIDKETYSSIPE 953
>TAIR|locus:2025712 [details] [associations]
symbol:AT1G80810 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
SUPFAM:SSF48371 EMBL:AC011713 IPI:IPI00846911 RefSeq:NP_001077860.1
UniGene:At.33874 ProteinModelPortal:A8MRD9 PaxDb:A8MRD9
PRIDE:A8MRD9 EnsemblPlants:AT1G80810.2 GeneID:844420
KEGG:ath:AT1G80810 TAIR:At1g80810 eggNOG:NOG241686
HOGENOM:HOG000015164 InParanoid:A8MRD9 OMA:PLDEYAP PhylomeDB:A8MRD9
ProtClustDB:CLSN2679925 ArrayExpress:A8MRD9 Genevestigator:A8MRD9
Uniprot:A8MRD9
Length = 774
Score = 379 (138.5 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
Identities = 86/216 (39%), Positives = 131/216 (60%)
Query: 51 AMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTFS 110
A+ P NA+V LL H D DV++ V +C+ EI RITAPE PYSDD++K+IF+L + F
Sbjct: 4 ALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIEAFE 63
Query: 111 GLKDTGGPSFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASDDHPESVLSS 170
L D S+ + +L+ +AK +SC+VMLDLEC +L+ +M+ FF DHP+ V SS
Sbjct: 64 KLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLVFSS 123
Query: 171 MQTIMIVLLEESEDIQEDLLVILLSALGR-NKNDTARR--LAMNVIEQCAGKLEAGIKQF 227
M+ IMI +++E+E + DLL LL+ + + N+N + LA V+ +CA KL+ I +
Sbjct: 124 MELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYIIEA 183
Query: 228 LVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGV 263
L S G S +S + + V+ +P++ S V
Sbjct: 184 LKSR--GTSLDMYSPV-VSSICQSVFN-TPKVHSPV 215
Score = 75 (31.5 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 1377 EDLIGYRIKVWWPMDK 1392
EDL+G R+ +WWP+DK
Sbjct: 503 EDLVGKRVNIWWPLDK 518
Score = 49 (22.3 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 17/77 (22%), Positives = 28/77 (36%)
Query: 1062 EDNSQGVFSSVSLPSTLYKPYE-KKEGDDSLASERQTWLADESVLTHFESLKLETHEVVG 1120
+ +GV + Y E + EG+DS + E W + + E + E +
Sbjct: 678 QSQDKGVEAETKEEEKQYPNSEGESEGEDSESEEEPKWRETDDMEDDEEEEEEEIDHMED 737
Query: 1121 SEIARHEALDDLEKDGN 1137
E +DD E N
Sbjct: 738 EAEEEKEEVDDKEASAN 754
>ASPGD|ASPL0000065875 [details] [associations]
symbol:bimD species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0043935 "sexual sporulation resulting in
formation of a cellular spore" evidence=IMP] [GO:0071459 "protein
localization to chromosome, centromeric region" evidence=IEA]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IEA]
[GO:2000817 "regulation of histone H3-T3 phosphorylation involved
in chromosome passenger complex localization to kinetochore"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001304 EMBL:AACD01000127 KO:K11267
OrthoDB:EOG44XNR4 RefSeq:XP_680565.1 ProteinModelPortal:Q5AWN4
EnsemblFungi:CADANIAT00000142 GeneID:2870172 KEGG:ani:AN7296.2
HOGENOM:HOG000168219 OMA:FAITHET Uniprot:Q5AWN4
Length = 1506
Score = 185 (70.2 bits), Expect = 1.0e-25, Sum P(5) = 1.0e-25
Identities = 50/181 (27%), Positives = 95/181 (52%)
Query: 26 LVKLLKQAATCLSELNQSPPASI-LEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEIT 84
+ LL++ T EL + I E+++ + LL H+DK V+ CI ++
Sbjct: 45 IADLLQRLQTLAQELRKLEQEEIEKESLRKVSQELATAQLLAHKDKGVRAWATCCIVDVL 104
Query: 85 RITAPEAPYSDDVLKDIFQLIVGTF-SGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLE 143
R+ AP+AP++ + LKDIF IV + L D P + + +L +LA+ +S V+M DL+
Sbjct: 105 RLCAPDAPFTANQLKDIFTCIVSSIIPALGDPSNPYNAQHIYVLNSLAEVKSIVLMTDLD 164
Query: 144 C-DELVNEMYSTFF------AVASDDHP--ESVLSSMQTIMIVLLEESEDIQEDLLVILL 194
D L+ ++ + F A AS P ++V M +++ +++ES + D++ +++
Sbjct: 165 HPDTLIVPLFISCFDIVAGSAKASTGEPVAKNVEYDMTRLLVTVIDESPVLAPDVVDVIV 224
Query: 195 S 195
+
Sbjct: 225 A 225
Score = 136 (52.9 bits), Expect = 1.0e-25, Sum P(5) = 1.0e-25
Identities = 84/476 (17%), Positives = 189/476 (39%)
Query: 464 RVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDG----DAPEIQKKI 519
RVR + + G D K + +++ L+ + YL + + G + +I+ ++
Sbjct: 633 RVRRILTLVGGLDEKAKKVFFAMQKRQVSLRTAVTVYLQACEEYNGGVMEKNKDQIKAQL 692
Query: 520 LFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKIL 579
++++F +PA+ + ++ D ++++ + + + + +L + L
Sbjct: 693 TKIVDALAKTFPDPARTSADLWKFAKIHDRRGYQLIRFAMAAVSDYRTVIKAIKELARRL 752
Query: 580 GAKHR--LYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILAR 637
+ + L++ L+TL +CS ++FN+ H+ I+ + ++ A + +I +
Sbjct: 753 QSSNNTILHETLTTLLYRCSSIVFNRSHIPAIMSISRSDENGLAAPAHEMLKEISSLNPE 812
Query: 638 FSPLLLGGTXXXXXXXXXXXXXIIKEGILHVLAKAGGTIRE---QLAATSSSVDLLLERL 694
+ + G +L G ++ +L L++
Sbjct: 813 VLEAQVQEICKDLEAQAPKATTVSAAGTEEILKACSGFAKKLPSKLPKERKFFQALVDYA 872
Query: 695 CLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAM 754
S R AK+AV L A+T + + ++ K + + L +L + A
Sbjct: 873 LHSPSPRAAKHAVLILMAVTDKKNMYAKDLVEKCVSKCTYDSERFLTKLATLSQLNLLAP 932
Query: 755 PVFETRXXXXXXXXXXXXLRCSNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVKD 813
+ L + ++ W D+ + K + +K +V L KD
Sbjct: 933 READEESDAIIKISVNQILLTNRSPTPNSGYFWSDQVDDETAAKEWALKIIVNR-LRAKD 991
Query: 814 ---------AHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRL--S 862
AH P D L K +++ GE+S+ ++ + K+ LRL +A ++L+L S
Sbjct: 992 GSDSDDDFRAHAEPVYDTLN---KLIVNSGELSKKKDTPATQKSRLRLLAANSLLKLCSS 1048
Query: 863 RQWDHKI--PVDVFHLTLRTPEISFPQAKKLFLSKVHQ-YVKDRLLDAK-YACAFL 914
++ P D + L + P+ + F++++ + V+D L A+ Y +L
Sbjct: 1049 HALCEQLLTPQDFNSIALVAQD-PLPEVRSGFINQLKKKLVQDTRLGARWYVIPYL 1103
Score = 89 (36.4 bits), Expect = 1.0e-25, Sum P(5) = 1.0e-25
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 246 HEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSA 296
H +I +++R P +L V+P L EL + + RL A +GDL + G A
Sbjct: 329 HRLIRELWRACPDVLQNVIPQLEAELSAESVSLRLLATQTIGDLTSGTGVA 379
Score = 76 (31.8 bits), Expect = 1.0e-25, Sum P(5) = 1.0e-25
Identities = 32/121 (26%), Positives = 52/121 (42%)
Query: 300 QFHS-VFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDP-----SRADAPQILTALCDRLLD 353
Q HS + FL R D+ +VR S + +LT S + ++T L L D
Sbjct: 421 QAHSSAYDSFLSRRLDKSASVRASWATAIGRIILTSAGGSGLSDNEEQTLITHLSSMLRD 480
Query: 354 FDENVRKQVVAVICDVAC-HALNSIPVE--------TVKLVAERLRDKSVLVKRYTMERL 404
DE VR V + H +N + V + ++AER++D+ V+ + + L
Sbjct: 481 ADERVRLAAVEAVGTFGLSHIVNKLGVSGGVSTQDSLLFILAERVKDRKSQVREHATKVL 540
Query: 405 A 405
A
Sbjct: 541 A 541
Score = 53 (23.7 bits), Expect = 1.0e-25, Sum P(5) = 1.0e-25
Identities = 22/80 (27%), Positives = 31/80 (38%)
Query: 1174 DVDILQMVREINLDNLGVLNKFESSNGHKHFPSKQIKVDLENEEIKKRKATDVT--SFPV 1231
D L E LD + V + NG +K+ K D E + A +
Sbjct: 1282 DTTFLPEDAEDRLDRI-VRATMRTKNGSSQAGAKKRKTDSTQEPSRDANAAKKARKNSES 1340
Query: 1232 PKRRRSLSAHGGFRTPKSNS 1251
RR+S S+ GF+ PK S
Sbjct: 1341 SSRRKSGSSAVGFKMPKRKS 1360
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 38/166 (22%), Positives = 65/166 (39%)
Query: 191 VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIY 250
V++L A+ KN A+ L + +C E + + S P + + +I
Sbjct: 885 VLILMAVTDKKNMYAKDLVEKCVSKCTYDSERFLTKLATLSQLNLLAPREADEESDAIIK 944
Query: 251 DVYRCSPQILSGVVPYL-TGELLTDQLD--TRLKAVGL---VGDLFAVPGSANNEQFHSV 304
+ +L+ P +G +DQ+D T K L V L A GS +++ F +
Sbjct: 945 --ISVNQILLTNRSPTPNSGYFWSDQVDDETAAKEWALKIIVNRLRAKDGSDSDDDFRA- 1001
Query: 305 FSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRAD--APQILTALC 348
+E + ++++ V L K T SR A L LC
Sbjct: 1002 HAEPVYDTLNKLI-VNSGELSKKKDTPATQKSRLRLLAANSLLKLC 1046
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 1121 SEIARHEALDDLEKDGNEV 1139
S+ AR LDD +++G ++
Sbjct: 304 SKQARRTNLDDSDEEGEDI 322
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 25/107 (23%), Positives = 43/107 (40%)
Query: 246 HEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVF 305
HE++ ++ +P++L V E+ D L+ + V +A E+
Sbjct: 800 HEMLKEISSLNPEVLEAQVQ----EICKD-LEAQAPKATTVS-------AAGTEEILKAC 847
Query: 306 SEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA--DAPQILTALCDR 350
S F K+L ++ R V L + RA A IL A+ D+
Sbjct: 848 SGFAKKLPSKLPKERKFFQALVDYALHSPSPRAAKHAVLILMAVTDK 894
>DICTYBASE|DDB_G0275929 [details] [associations]
symbol:pds5 "sister chromatid cohesion protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR016024 dictyBase:DDB_G0275929
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008156 KO:K11267 eggNOG:NOG268017
RefSeq:XP_643624.1 EnsemblProtists:DDB0305112 GeneID:8620211
KEGG:ddi:DDB_G0275929 InParanoid:Q552Q7 OMA:NMIARRI
ProtClustDB:CLSZ2430964 Uniprot:Q552Q7
Length = 1450
Score = 154 (59.3 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 63/271 (23%), Positives = 124/271 (45%)
Query: 246 HEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE---QFH 302
+E++++++ P+ + + L +L R A ++ ++ SA++E Q
Sbjct: 412 NEILFEMFNILPEFIYPALQNLEFDLEDVNASIRKGAAIVLSRCYSTE-SASDELIAQRP 470
Query: 303 SVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQV 362
++++ FL R D + +R ++E + T S + ++L ++ DR D + ++R +
Sbjct: 471 TLYTTFLNRFHDVDIKIRTVMMEFSEH--FTTTSDLEMERVLKSVRDRFRDSEPDIRIKA 528
Query: 363 VAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQ 422
+ + + E + ER+RDK V++ L+ ++R +R G I+
Sbjct: 529 IQIFQKYIIKNPELMNPELMSEYLERVRDKDSKVRKDAEISLSTVWRS--VREKYGPIDD 586
Query: 423 --NE----FEWIPGKILRCL--YDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSG 474
N F IP ++ CL YD D IE L P VK+R + ++ I+
Sbjct: 587 WSNTLIDCFSTIPNTLIHCLGLYDDD--KYRIEIAFDSILLPQHSDVKNRSQVFLEIYKY 644
Query: 475 FDRIEMKALEKILEQKQRLQQEMQRYLSLRQ 505
D + +K LE+K+ L+QE +L+L Q
Sbjct: 645 LDESNKQLFKKYLEEKKSLRQE---FLALIQ 672
Score = 116 (45.9 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 86/394 (21%), Positives = 161/394 (40%)
Query: 721 SLSVLYKRLVDMLEEKT-HLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLR--CS- 776
+L L L D LE+K+ +L ++L+ +GC+A+ V + C+
Sbjct: 954 TLKDLANNLFDQLEDKSKNLLSILEVIGCLAKGYSLVLSEHLDTLDILLIKKIMTGVCTL 1013
Query: 777 ---NKIRNDTKA---CWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSM 830
K++ + S+ L+KI IK + L +++ I +++ +L
Sbjct: 1014 DFNQKVQLNKSVEHHLNTSYSKDVLIKIAAIKCMSNYLLGLRE--ITKKSHEMVNMLFEF 1071
Query: 831 LSYGEMSEDIESSSVDKAHLRLASAKAVLRLSR--QWDHKIPVDVFHLTLRTPEISFPQ- 887
Y + ++ + ++K+HL++ A +LR+ + Q++ +I F L + I+ Q
Sbjct: 1072 --YIGLDKNKTYNDLEKSHLKIHIAIGLLRVFQRSQYEKEITPQQFILICNSTSITTKQR 1129
Query: 888 AKKLFLSKVHQYVKDRLLDA---KYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKA 944
L + + K +L+ KY AF + S K + + II+ + +
Sbjct: 1130 GDPLIRRLIEKLAKVMILNRLPMKYMAAFGMAAQQPYSVLALVRKHSTS-IIKTRRMVIS 1188
Query: 945 RQISVQSDANSFAT-YPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLI 1003
R + S A + YPE +PY ++ +H D + +D + C L F + +L+
Sbjct: 1189 RLAASLSMAKNLTEFYPESSMPYFLYVVSHRE--DFE--RDAPDYIESACYLNFFIDLLV 1244
Query: 1004 HKDEDVKSEASNKEXXXXXXXXXXXXKCSEDIVDAAKSKNSHAICDLGLSI-TKRLSRME 1062
EA N K S D +D KSKN +LGL I T + + +
Sbjct: 1245 E-------EADN---YSIIHTIFTKLKRSTDALDK-KSKNHIIAAELGLQILTHQYQQKK 1293
Query: 1063 DNSQGVFSSVSLPSTLYKPYEKKEG---DDSLAS 1093
Q + LP Y ++ ++ DD + S
Sbjct: 1294 WKPQKHPIVIVLPEKFYIIHDDQDEMSIDDEVTS 1327
Score = 112 (44.5 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 48/201 (23%), Positives = 88/201 (43%)
Query: 4 KLEQQLKEVG-SKLETPPSTKDGLV---KLLKQAATCLSELNQSPPASILEAMQPFLNAI 59
K++ LK + +L T G + K++K+ L E Q E ++ L +
Sbjct: 145 KIKYNLKPINIERLATYDQHMSGTLSNEKIIKRLKK-LDEYLQDKKRGNTEGLEIVLEVL 203
Query: 60 VQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVG-TFSGLKDTGGP 118
+ P ++ +++L+ + C+ EI RI AP P+ VLK +F+L G K
Sbjct: 204 IDPKFADNKIFEIRLMTSCCLSEIFRIYAPTLPFDMVVLKVVFKLFTEQVLQGDK-VDKK 262
Query: 119 SFGRRVVILETLAKYRSCVVMLDLECDELVNEMYSTFFAVASD-DH-PESVLSSMQTIMI 176
F + +LE L+ + ++ ++ L V D +H P ++ S T++
Sbjct: 263 LFPQYFQMLERLSVIKVFALLALVDSSMLTPFFKDCLSRVHGDKEHQPMDIMFS--TLLN 320
Query: 177 VLLEESEDIQEDLLVILLSAL 197
+LE E++ L LL +L
Sbjct: 321 TILESLEEVPTSLWNELLESL 341
Score = 75 (31.5 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 26/121 (21%), Positives = 55/121 (45%)
Query: 490 KQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDA 549
+Q+ QQ+ Q+ L+Q D I+ I ++ + E +K LI K
Sbjct: 695 QQQQQQQQQQQQQLQQPEND-----IEVYITHVDNLLPKFIGESSKKLVRQLITPSNK-- 747
Query: 550 NVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEI 609
+ +L+ + D NT+F + + + ++ + +F+ + K +Y + KE++K +
Sbjct: 748 KILDLLVLISDINTTFQEQYNIKISIISKAQNESSFSEFIKYMVNKLAYSIVGKENIKYL 807
Query: 610 L 610
L
Sbjct: 808 L 808
Score = 70 (29.7 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 665 ILHVLAKAGGTIREQLAATSSSVDLLLE-------RLCLEGSRRQAKYAVHALAAITKDD 717
+L +L+ + T++ S++D+LL L + K+A AL +I +
Sbjct: 884 VLQILSNSWKTLKLSKKTLKSTLDMLLRLTQVPQPTLARLAFKTFIKFATPALTSINSTN 943
Query: 718 G-------LKSLSVLYKRLVDMLEEKT-HLPAVLQSLGCIAQ 751
G + +L L L D LE+K+ +L ++L+ +GC+A+
Sbjct: 944 GKVDNNKLVVTLKDLANNLFDQLEDKSKNLLSILEVIGCLAK 985
Score = 40 (19.1 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 602 NKEHVKEILLEVAAQKSSAN 621
N + K++L+++AA K +N
Sbjct: 1030 NTSYSKDVLIKIAAIKCMSN 1049
Score = 40 (19.1 bits), Expect = 7.2e-10, Sum P(4) = 7.2e-10
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 291 AVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCL 331
++ A NE S FSEF+K + +++ A + E++K L
Sbjct: 772 SIISKAQNE---SSFSEFIKYMVNKL-AYSIVGKENIKYLL 808
Score = 37 (18.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 937 QMHHQMKARQISVQSDANSFATYPEYIIPYLVHT 970
Q + +K IS + +SF+ + +Y++ L ++
Sbjct: 764 QEQYNIKISIISKAQNESSFSEFIKYMVNKLAYS 797
>CGD|CAL0006191 [details] [associations]
symbol:PDS5 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0030892 "mitotic cohesin complex"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0051455
"attachment of spindle microtubules to kinetochore involved in
homologous chromosome segregation" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:2000817 "regulation
of histone H3-T3 phosphorylation involved in chromosome passenger
complex localization to kinetochore" evidence=IEA] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IEA]
InterPro:IPR016024 CGD:CAL0006191 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267
eggNOG:NOG268017 RefSeq:XP_715997.1 RefSeq:XP_716056.1
STRING:Q5A2J0 GeneID:3642341 GeneID:3642402 KEGG:cal:CaO19.2216
KEGG:cal:CaO19.9761 Uniprot:Q5A2J0
Length = 1303
Score = 192 (72.6 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 46/169 (27%), Positives = 89/169 (52%)
Query: 28 KLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRIT 87
+L+ + EL+ +S+ + + +V LL H V+ + C+ +I RI
Sbjct: 35 ELINRLIALHDELSNIDDSSV--NLSNYTTDLVNKKLLSHTSMGVQAYLCCCLSDILRIY 92
Query: 88 APEAPYSDDVLKDIFQLIVGTFSGLK-DTGGPSFGRRVVILETLAKYRSCVVMLDL-ECD 145
AP APYSD L D+F+L FS L P + + V +L+ LA+ +S +++ DL + +
Sbjct: 93 APNAPYSDQQLSDVFKLFFKQFSRLSAKKDDPFYQQHVYLLKRLAEAKSTIIITDLPDSE 152
Query: 146 ELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILL 194
L+ +++TF+ +A+ P + + + I+ +L E+E + +L ++L
Sbjct: 153 SLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSEAEVVPHQILQLIL 201
Score = 118 (46.6 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 55/275 (20%), Positives = 123/275 (44%)
Query: 246 HEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVP---GSANNEQF- 301
H + +++ P +LS V+ + EL D R+ A +G + P ++ N F
Sbjct: 287 HHLSIQLWKFIPSVLSSVMALIDDELNADDEKVRILATVTIGQMLGSPVYSSASTNVNFF 346
Query: 302 --HS-VFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDP-SRADAPQILTALCDR-LLDFDE 356
H ++ +LK+ +D VR ++ + + + ++ + + Q+L+A + L+D +E
Sbjct: 347 ATHKQTWNNWLKKTSDVSSNVRSKWVQQIPNIICSNNYTTTEINQMLSACVHKCLVDTEE 406
Query: 357 NVRKQVVAVICDVAC-HALNSIPV-ETVKLVAERLRDKSVLVKRYTMERLADIFRGCCL- 413
VR+ + ++ H +N I E + + + R+K +++ +++ L +
Sbjct: 407 KVREAACVCLSEIPYQHFINKIATTELINTLFQLTREKHASIRKISIKTLGSYYASYMKV 466
Query: 414 -RNFNGSIN---QNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKD-RVRHW 468
+N + I ++ IP +IL +Y + I +++ ++F + D +
Sbjct: 467 EKNTSSEIGTELKDSILSIPNQILSLVY---INNKEITTLVDLAVFEDMLPILDLNPENR 523
Query: 469 VRIFSGFDRI-EMKALEKILEQKQRLQQEMQRYLS 502
V F R+ + K E + +R QQ++ + LS
Sbjct: 524 VERLVQFYRVLDAKGKEAFVAINKR-QQQISKVLS 557
Score = 62 (26.9 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 59/309 (19%), Positives = 120/309 (38%)
Query: 691 LERLCLEGSRRQAKYAVHALAAITKDDGLKS--LSVLYKRLVDMLEEKTHLPAVLQSLGC 748
L+ L + G+ +AKY++ + K + + + +Y +D+ E T L L S+
Sbjct: 773 LKNLAINGTPEEAKYSIKIIGLNDKKEVYCAGIMDSIYP--LDL--ESTKLSTNLSSMAE 828
Query: 749 I-AQTAMPVFETRXXXXXXXXXXXXLRCSN-KIRNDTKACWDDRSEL-----CLLKIYGI 801
I + + + L+ N N T W +EL K+ I
Sbjct: 829 IFVVDRLAISDKENELTPLVIKEFFLKNRNLDNHNVTDNTWITTTELNSHPTLYEKLIAI 888
Query: 802 KTLVKSYLPVKDAHIRPGIDD-----LLGILKSMLSY-GEMSEDIESSSVD-------KA 848
+ LV + + A + + L ++K ++S+ G E I + K+
Sbjct: 889 RLLVNNLKSLDKADLSESAKEEAKQKALPVIKLLMSFIGNNGEIINKNDPSWPTPDSYKS 948
Query: 849 HLRLASAKAVLRLSR---QWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLL 905
LRLA+ +L+L++ + + + LT + + + FL+ + + D L+
Sbjct: 949 RLRLAAGLYMLKLAKIPIYSETMLSASIRRLTFLLNDEDY-NVRARFLNSLQAKLADELI 1007
Query: 906 DAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIP 965
K+ F E P FE + I M + ++++ +++ + + +
Sbjct: 1008 SEKFLAIVFFSALE---PNFELKNDATMWISAMFKRSESKK-NIKFEKS---------LV 1054
Query: 966 YLVHTFAHH 974
L+H AHH
Sbjct: 1055 RLIHVLAHH 1063
Score = 41 (19.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 561 SNTSFDQAFTGRDDLLK-ILGAKHRLYDFL-STLS 593
SN+ FD F+ D+LK + +L+ F+ S LS
Sbjct: 268 SNSKFDTKFSQAMDILKKVHHLSIQLWKFIPSVLS 302
>UNIPROTKB|Q5A2J0 [details] [associations]
symbol:PDS5 "Putative uncharacterized protein PDS5"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR016024 CGD:CAL0006191
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267 eggNOG:NOG268017
RefSeq:XP_715997.1 RefSeq:XP_716056.1 STRING:Q5A2J0 GeneID:3642341
GeneID:3642402 KEGG:cal:CaO19.2216 KEGG:cal:CaO19.9761
Uniprot:Q5A2J0
Length = 1303
Score = 192 (72.6 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 46/169 (27%), Positives = 89/169 (52%)
Query: 28 KLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRIT 87
+L+ + EL+ +S+ + + +V LL H V+ + C+ +I RI
Sbjct: 35 ELINRLIALHDELSNIDDSSV--NLSNYTTDLVNKKLLSHTSMGVQAYLCCCLSDILRIY 92
Query: 88 APEAPYSDDVLKDIFQLIVGTFSGLK-DTGGPSFGRRVVILETLAKYRSCVVMLDL-ECD 145
AP APYSD L D+F+L FS L P + + V +L+ LA+ +S +++ DL + +
Sbjct: 93 APNAPYSDQQLSDVFKLFFKQFSRLSAKKDDPFYQQHVYLLKRLAEAKSTIIITDLPDSE 152
Query: 146 ELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILL 194
L+ +++TF+ +A+ P + + + I+ +L E+E + +L ++L
Sbjct: 153 SLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSEAEVVPHQILQLIL 201
Score = 118 (46.6 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 55/275 (20%), Positives = 123/275 (44%)
Query: 246 HEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVP---GSANNEQF- 301
H + +++ P +LS V+ + EL D R+ A +G + P ++ N F
Sbjct: 287 HHLSIQLWKFIPSVLSSVMALIDDELNADDEKVRILATVTIGQMLGSPVYSSASTNVNFF 346
Query: 302 --HS-VFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDP-SRADAPQILTALCDR-LLDFDE 356
H ++ +LK+ +D VR ++ + + + ++ + + Q+L+A + L+D +E
Sbjct: 347 ATHKQTWNNWLKKTSDVSSNVRSKWVQQIPNIICSNNYTTTEINQMLSACVHKCLVDTEE 406
Query: 357 NVRKQVVAVICDVAC-HALNSIPV-ETVKLVAERLRDKSVLVKRYTMERLADIFRGCCL- 413
VR+ + ++ H +N I E + + + R+K +++ +++ L +
Sbjct: 407 KVREAACVCLSEIPYQHFINKIATTELINTLFQLTREKHASIRKISIKTLGSYYASYMKV 466
Query: 414 -RNFNGSIN---QNEFEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKD-RVRHW 468
+N + I ++ IP +IL +Y + I +++ ++F + D +
Sbjct: 467 EKNTSSEIGTELKDSILSIPNQILSLVY---INNKEITTLVDLAVFEDMLPILDLNPENR 523
Query: 469 VRIFSGFDRI-EMKALEKILEQKQRLQQEMQRYLS 502
V F R+ + K E + +R QQ++ + LS
Sbjct: 524 VERLVQFYRVLDAKGKEAFVAINKR-QQQISKVLS 557
Score = 62 (26.9 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 59/309 (19%), Positives = 120/309 (38%)
Query: 691 LERLCLEGSRRQAKYAVHALAAITKDDGLKS--LSVLYKRLVDMLEEKTHLPAVLQSLGC 748
L+ L + G+ +AKY++ + K + + + +Y +D+ E T L L S+
Sbjct: 773 LKNLAINGTPEEAKYSIKIIGLNDKKEVYCAGIMDSIYP--LDL--ESTKLSTNLSSMAE 828
Query: 749 I-AQTAMPVFETRXXXXXXXXXXXXLRCSN-KIRNDTKACWDDRSEL-----CLLKIYGI 801
I + + + L+ N N T W +EL K+ I
Sbjct: 829 IFVVDRLAISDKENELTPLVIKEFFLKNRNLDNHNVTDNTWITTTELNSHPTLYEKLIAI 888
Query: 802 KTLVKSYLPVKDAHIRPGIDD-----LLGILKSMLSY-GEMSEDIESSSVD-------KA 848
+ LV + + A + + L ++K ++S+ G E I + K+
Sbjct: 889 RLLVNNLKSLDKADLSESAKEEAKQKALPVIKLLMSFIGNNGEIINKNDPSWPTPDSYKS 948
Query: 849 HLRLASAKAVLRLSR---QWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLL 905
LRLA+ +L+L++ + + + LT + + + FL+ + + D L+
Sbjct: 949 RLRLAAGLYMLKLAKIPIYSETMLSASIRRLTFLLNDEDY-NVRARFLNSLQAKLADELI 1007
Query: 906 DAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIP 965
K+ F E P FE + I M + ++++ +++ + + +
Sbjct: 1008 SEKFLAIVFFSALE---PNFELKNDATMWISAMFKRSESKK-NIKFEKS---------LV 1054
Query: 966 YLVHTFAHH 974
L+H AHH
Sbjct: 1055 RLIHVLAHH 1063
Score = 41 (19.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 561 SNTSFDQAFTGRDDLLK-ILGAKHRLYDFL-STLS 593
SN+ FD F+ D+LK + +L+ F+ S LS
Sbjct: 268 SNSKFDTKFSQAMDILKKVHHLSIQLWKFIPSVLS 302
>SGD|S000004681 [details] [associations]
symbol:PDS5 "Protein involved in sister chromatid
condensation and cohesion" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0007129 "synapsis" evidence=IMP]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007126
"meiosis" evidence=IMP] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=ISS] [GO:0000798 "nuclear cohesin complex" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR016024 SGD:S000004681 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0005198
EMBL:Z48952 EMBL:BK006946 GO:GO:0006302 GO:GO:0000794 EMBL:Z49259
GO:GO:0007076 GO:GO:0007064 GO:GO:0007129 KO:K11267
eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OrthoDB:EOG44XNR4
PIR:S54451 RefSeq:NP_013793.1 ProteinModelPortal:Q04264 SMR:Q04264
DIP:DIP-6799N IntAct:Q04264 MINT:MINT-650430 STRING:Q04264
PaxDb:Q04264 PeptideAtlas:Q04264 EnsemblFungi:YMR076C GeneID:855099
KEGG:sce:YMR076C CYGD:YMR076c HOGENOM:HOG000248675 OMA:KIWINFT
NextBio:978417 Genevestigator:Q04264 GermOnline:YMR076C
Uniprot:Q04264
Length = 1277
Score = 197 (74.4 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 93/379 (24%), Positives = 177/379 (46%)
Query: 21 STKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCI 80
ST + L+ LK L+ L+Q + L + + +A+V LLKH+D ++ A C+
Sbjct: 24 STNE-LLDRLKALHEELASLDQDN--TDLTGLDKYRDALVSRKLLKHKDVGIRAFTACCL 80
Query: 81 CEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVML 140
+I R+ AP+APY+D L DIF+L++ F L D ++ ++ L +YRS V++
Sbjct: 81 SDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQENGYHIQQTYLITKLLEYRSIVLLA 140
Query: 141 DL-ECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSA-LG 198
DL + L+ E++ F+ + P + + + I+ ++ E + + ++L ++ + L
Sbjct: 141 DLPSSNNLLIELFHIFYD-PNKSFPARLFNVIGGILGEVISEFDSVPLEVLRLIFNKFLT 199
Query: 199 RNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQ 258
N N+ L NV C ++ + + MS +S I HE D + +
Sbjct: 200 YNPNEIPEGL--NVTSDCGYEVSLILCDTYSNRMSRHLTKYYSEI-IHEATNDDN--NSR 254
Query: 259 ILSGVVPYLTGEL-LTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIV 317
+L+ VV L L + + + AV +G ++ S N +F + +L +I+
Sbjct: 255 LLTVVVKLHKLVLRLWETVPELINAV--IGFIYHELSSENE-----LFRKEATKLIGQIL 307
Query: 318 AVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSI 377
S L V + +D +A +I D +++ E++ Q++A D++ LN
Sbjct: 308 T-SYSDLNFVSTH--SDTFKAWISKIADISPDVRVEWTESI-PQIIATREDIS-KELNQA 362
Query: 378 PVETVKLVAERLRDKSVLV 396
+T R+R SV++
Sbjct: 363 LAKTFIDSDPRVRRTSVMI 381
Score = 129 (50.5 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 63/345 (18%), Positives = 141/345 (40%)
Query: 243 IDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFH 302
+ H+++ ++ P++++ V+ ++ EL ++ R +A L+G + N H
Sbjct: 260 VKLHKLVLRLWETVPELINAVIGFIYHELSSENELFRKEATKLIGQILTSYSDLNFVSTH 319
Query: 303 S-VFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILT-ALCDRLLDFDENVRK 360
S F ++ ++ D VR+ E + + T R D + L AL +D D VR+
Sbjct: 320 SDTFKAWISKIADISPDVRVEWTESIPQIIAT---REDISKELNQALAKTFIDSDPRVRR 376
Query: 361 QVVAVICDVACHALNSIPVETV-KLVAERLRDKSVL-VKRYTMERLADIFRGCCLRNFNG 418
V + N +PV + K + + S+L + R + + ++ + ++
Sbjct: 377 TSVMIF--------NKVPVTEIWKNITNKAIYTSLLHLAREKHKEVRELCINTMAKFYSN 428
Query: 419 SIN------QNEFEW-----IPGKILRCLYDKDFG-SDTIESVLCGSLFPTGFSVKDRVR 466
S+N QN+ W IP + Y D ++ ++SV+ L P RV
Sbjct: 429 SLNEIERTYQNKEIWEIIDTIPSTLYNLYYINDLNINEQVDSVIFEYLLPFEPDNDKRVH 488
Query: 467 HWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQM--HQDG----DAPEIQKKIL 520
+ + S FD+ + ++ ++ + +Y+ + +Q+ P + K
Sbjct: 489 RLLTVLSHFDKKAFTSFFAFNARQIKISFAISKYIDFSKFLNNQESMSSSQGPIVMNKYN 548
Query: 521 FCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSF 565
+ ++ ++ KA + + Q D ++ +L + ++ F
Sbjct: 549 QTLQWLASGLSDSTKAIDALETIKQFNDERIFYLLNACVTNDIPF 593
Score = 76 (31.8 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 79/341 (23%), Positives = 126/341 (36%)
Query: 663 EGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITK-DDGLKS 721
E L L KA T+++Q+ + L +E KYA +A K ++ LK
Sbjct: 711 EEALKTLYKASKTLKDQVDFDDTFFFTKLYDFAVESKPEITKYATKLIALSPKAEETLKK 770
Query: 722 LSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRXXXXXXXXXXXXLRCSNKIRN 781
+ + L D+ ++K ++ + + P + SN++
Sbjct: 771 IKIRILPL-DLQKDKYFTSHIIVLMEIFKK--FPHVLNDDSTDIISYLIKEVLLSNQVVG 827
Query: 782 DTKA--CWDDRSELCLLKIYGI--KTLVKSYLPVKDAHIRPGI--DDLLGIL--KSM--- 830
D+K W + S L K I K K I P + D+L K+M
Sbjct: 828 DSKKEIDWVEDSLLSDTKYSAIGNKVFTLKLFTNKLRSIAPDVPRDELAESFTEKTMKLF 887
Query: 831 ----LSYGEMSEDIESS-----SVDKAHLRLASAKAVLRLSR--QWDHKI-PVDVFHLTL 878
S GE+ + S + LR + VL+L+R ++ I P D+ L
Sbjct: 888 FYLIASGGELISEFNKEFYPTPSNYQTKLRCVAGIQVLKLARISNLNNFIKPSDIIKLIN 947
Query: 879 RTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQM 938
+ S P +K FL ++ YV + L+ K+ F E P+ E K I
Sbjct: 948 LVEDESLP-VRKTFLEQLKDYVANELISIKFLPLVFFTAYE---PDVEL-KTTTKIWINF 1002
Query: 939 HHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDI 979
+K S + T E +P L+H AHH PDI
Sbjct: 1003 TFGLK----SFKK-----GTIFERALPRLIHAIAHH--PDI 1032
Score = 68 (29.0 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 59/251 (23%), Positives = 93/251 (37%)
Query: 850 LRLASAKAVLRLSR--QWDHKI-PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLD 906
LR + VL+L+R ++ I P D+ L + S P +K FL ++ YV + L+
Sbjct: 916 LRCVAGIQVLKLARISNLNNFIKPSDIIKLINLVEDESLP-VRKTFLEQLKDYVANELIS 974
Query: 907 AKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPY 966
K+ F E P+ E K I +K S + T E +P
Sbjct: 975 IKFLPLVFFTAYE---PDVEL-KTTTKIWINFTFGLK----SFKK-----GTIFERALPR 1021
Query: 967 LVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKEXXXXXXXXX 1026
L+H AHH PDI D + + I +L + D E +
Sbjct: 1022 LIHAIAHH--PDIVGGLDSEGDAYLNALTTAIDYLLFYFDSIAAQENFSLLYYLSERVKN 1079
Query: 1027 XXXKCSEDIVD---------AAKS-----KNSHAICDLGLSITKRLSRMEDNSQGVF-SS 1071
K ED +D A K + + I +L I L ++ +
Sbjct: 1080 YQDKLVEDEIDEEEGPQKEEAPKKHRPYGQKMYIIGELSQMILLNLKEKKNWQHSAYPGK 1139
Query: 1072 VSLPSTLYKPY 1082
++LPS L+KP+
Sbjct: 1140 LNLPSDLFKPF 1150
Score = 44 (20.5 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1187 DNLGVLNKFESSNGHKHFPSKQIKVDLE 1214
D+ NK E+ GH++ K+++V E
Sbjct: 1236 DSYSPSNKNETKKGHENIVMKKLRVRKE 1263
>WB|WBGene00001352 [details] [associations]
symbol:evl-14 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0051177 "meiotic
sister chromatid cohesion" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IMP] InterPro:IPR016024
GO:GO:0009792 GO:GO:0006898 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0040011 GO:GO:0040018 GO:GO:0040035
GO:GO:0007064 EMBL:AL024499 GO:GO:0051177 EMBL:Z50874 KO:K11267
GeneTree:ENSGT00390000012488 PIR:T23142 RefSeq:NP_497865.2
ProteinModelPortal:G5EC05 EnsemblMetazoa:H38K22.1 GeneID:175555
KEGG:cel:CELE_H38K22.1 CTD:175555 WormBase:H38K22.1 OMA:ELIPPKR
NextBio:888652 Uniprot:G5EC05
Length = 1570
Score = 151 (58.2 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 61/262 (23%), Positives = 121/262 (46%)
Query: 165 ESVLSSMQTIMIVLLEESEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLE 221
E + S+ I ++ + +Q + L +L + R+ AR LA ++I C+
Sbjct: 202 EKIRKSLIQIATTVITNLDFVQNECLDVLFYHIINPQRSNFAEARALAEDIIRSCSDNES 261
Query: 222 AGIKQFLVSSMSGDSRPGH-----------SHIDYHEVIYDVYRCSPQILSGVVPYLTGE 270
+ + S+M+ ++ G + + EV+ ++ S ++SG + L
Sbjct: 262 DTLANSIRSTMTAAAKEGKLPEEFELTGSSNRSKFFEVLRYLHYVSFDLVSGAIQELKFW 321
Query: 271 LLTDQLDTRLKAVGLVG----DLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEH 326
L ++ R +AV +VG D G +N+ +S FL D+ +VR ++
Sbjct: 322 LQSENEQYRKEAVTVVGMLTRDKHCQFGMDSNDP---TWSAFLNASIDQDDSVRHEFVQQ 378
Query: 327 VKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVA 386
K L+++ S QI+ +L +D ++++R+ VV + +VA L I + +K A
Sbjct: 379 SKDILISNHSHLRG-QIINSLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVISDKMLKACA 437
Query: 387 ERLRDKSVLVKRYTMERLADIF 408
ER++DK V+ ++RL D++
Sbjct: 438 ERMKDKKPKVRIQAIKRLMDLY 459
Score = 97 (39.2 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 28/111 (25%), Positives = 49/111 (44%)
Query: 27 VKLLKQAATCLSEL--NQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEIT 84
++ L++ CL + N S S + Q L + + D ++L++ C+ I
Sbjct: 24 IERLRKLFNCLHDCKTNNSEEVSSPNRFARLFQHLSQECFLDNSNTDFRILLSLCLANIL 83
Query: 85 RITAPEAPYSDDV-LKDIFQLIVGTFSGLKDT--GGPSFGRRVVILETLAK 132
RI PE P + LK+++ + T GL D P F ++ET+ K
Sbjct: 84 RIFQPELPTPSVMDLKEVYIYLFRTMRGLGDVTQDSPKFKNYFSLVETMEK 134
Score = 47 (21.6 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 454 LFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLS----LRQMHQD 509
L P K RVR +F D I I+ + +L++ M LS +M
Sbjct: 532 LVPYKVEPKLRVRLMADLFRNLDDIGCMLFGDIINRSSQLRRAMIGILSQVGQFTEMTTQ 591
Query: 510 GDAPEIQKKILFCFRVMSRSFAEPAKAEENFLI-LDQLKDAN-VWKILMNLL-DSNTSFD 566
A +++++I R + + F + E+N ++ ++Q+ + + + ++ L+ +S TS +
Sbjct: 592 SSA-QLKERI----RRICQIFPDAQILEKNMMVFVNQMAENDETFNLVKKLMSESYTSEE 646
Query: 567 QAFT 570
A T
Sbjct: 647 NART 650
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 1100 ADESVLTHFESLKLETHEVVGSEIARH 1126
ADE ++ S L + E + E A H
Sbjct: 732 ADEQIIEEIRSKILASEEPIAIEAALH 758
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(5) = 3.3e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 1341 NSDMLSKSPVGSAKKRKRR-SIAGLAKCTTKNAGVNIE 1377
N +L S KKR R S+ G +TK A ++++
Sbjct: 1376 NGSILKNGSGPSPKKRNSRGSVKGRQN-STKEAEIDVD 1412
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1393 1275 0.00081 124 3 11 22 0.38 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 624 (66 KB)
Total size of DFA: 516 KB (2239 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 109.27u 0.12s 109.39t Elapsed: 00:00:06
Total cpu time: 109.29u 0.12s 109.41t Elapsed: 00:00:06
Start: Tue May 21 23:34:13 2013 End: Tue May 21 23:34:19 2013