BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000609
(1393 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus
GN=PDS5B PE=2 SV=3
Length = 1412
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 271/1090 (24%), Positives = 492/1090 (45%), Gaps = 77/1090 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A L + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSEAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 EAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYLYATLDSN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ + L +Q D + I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCINAIFSSKETQ-FAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S L+KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE-- 928
+ L Q +++F K+H+ + L +Y CA +K P E
Sbjct: 903 QYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRAH 957
Query: 929 -KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKA 987
+Q L I + + + +V S PEY++PY +H AH PD + +D++
Sbjct: 958 ARQCLVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQ 1013
Query: 988 FELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNS 1044
+ + L+FI+ +L+ K+E+ S + I + +IK ++D DA ++
Sbjct: 1014 LKDIKECLWFILEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDAKMNEKL 1065
Query: 1045 HAICDLGLSI 1054
+ +CD+ ++I
Sbjct: 1066 YTVCDVAMNI 1075
>sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens
GN=PDS5B PE=1 SV=1
Length = 1447
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 271/1090 (24%), Positives = 492/1090 (45%), Gaps = 77/1090 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A + + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSAAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 DAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S ++KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE-- 928
+ L Q +++F K+H+ + L +Y CA +K P E
Sbjct: 903 QYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRAH 957
Query: 929 -KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKA 987
+Q L I + + + +V S PEY++PY +H AH PD + +D++
Sbjct: 958 ARQCLVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQ 1013
Query: 988 FELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNS 1044
+ V L+F++ +L+ K+E+ S + I + +IK ++D DA ++
Sbjct: 1014 LKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDAKMNEKL 1065
Query: 1045 HAICDLGLSI 1054
+ +CD+ ++I
Sbjct: 1066 YTVCDVAMNI 1075
>sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis
GN=pds5b-b PE=2 SV=2
Length = 1464
Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 264/1088 (24%), Positives = 495/1088 (45%), Gaps = 73/1088 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKEQYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE C+E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDCNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL ++ L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ L+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHSLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A L + + + V ER DK V++ M LA I++ L+ G
Sbjct: 368 HDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQVEAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ + WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 ESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDTN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ ++ L L ++ + + I K++ V++++ +P K +
Sbjct: 488 AVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITKNLPDPGKGQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + L L+ S+ QA D+ K LG K FL +
Sbjct: 544 DFLKKFTQVLEDDEKIRGQLEKLVSPTCSYKQAEVCVRDITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISSLIKLVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L++ +GS
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGNKIEEDFPHIRSALLPVLQQKAKKGSP 723
Query: 701 RQAKYAVHALAAI--TKDDGLKSL-SVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVF 757
RQAKY++H + AI +K+ + L+K L E+ L L ++G IAQ A F
Sbjct: 724 RQAKYSIHCIHAIFSSKETQFAQIFEPLHKSLDPGNPEQ--LITSLVTIGHIAQLAPDQF 781
Query: 758 ETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKD 813
+S + F+ +L T W D+ S+ ++KI IK +V+ L +K+
Sbjct: 782 TAPLKSMVATFVVKDLLMSDQLPGKKTTKLWVPDDEVSQETMVKIQAIKMMVRWLLGMKN 841
Query: 814 AHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPV 871
+ G L + + + G+++E + S D + LRLA+ A+++L+++ + I +
Sbjct: 842 NLSKSGNSTLRLLTAILHTDGDLTEHGKLSKPDMSRLRLAAGSAIVKLAQEPCYHEIITL 901
Query: 872 DVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE- 928
+ + L Q ++LF K+H+ + L +Y CA +K P E
Sbjct: 902 EQYQLCALVINDECYQVRQLFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRA 956
Query: 929 --KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVK 986
+Q L I + + + +V F+ PEY++PY VH H PD + +D++
Sbjct: 957 HARQCLVKNINVRREYLKQHAAVSEKL--FSLLPEYVVPYTVHLLTHD--PDYVKVQDIE 1012
Query: 987 AFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHA 1046
+ + L+F++ +L+ K+E+ ++ I ++ + K +++ D ++ +
Sbjct: 1013 QLKDIKECLWFVLEILMSKNEN-----NSHAFIRKMVEYIKQTKDAQNPDDQKMNEKMYT 1067
Query: 1047 ICDLGLSI 1054
+CD+ ++I
Sbjct: 1068 VCDVAMNI 1075
>sp|Q4VA53|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus
GN=Pds5b PE=1 SV=1
Length = 1446
Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 269/1090 (24%), Positives = 491/1090 (45%), Gaps = 77/1090 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A + + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSAAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ W+ K+L Y +E + + P +R++ +++ D
Sbjct: 428 DAAKQISWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S ++KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE-- 928
+ L Q +++F K+H+ + L +Y CA +K P E
Sbjct: 903 QYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRAH 957
Query: 929 -KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKA 987
+Q L I + + + +V S PEY++PY +H AH PD + +D++
Sbjct: 958 ARQCLVKNITVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQ 1013
Query: 988 FELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNS 1044
+ V L+F++ +L+ K+E+ S + I + +IK ++D D ++
Sbjct: 1014 LKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDTKMNEKL 1065
Query: 1045 HAICDLGLSI 1054
+ +CD+ ++I
Sbjct: 1066 YTVCDVAMNI 1075
>sp|Q6TRW4|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus
GN=Pds5b PE=2 SV=2
Length = 1447
Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 269/1090 (24%), Positives = 491/1090 (45%), Gaps = 77/1090 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A + + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSAAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ W+ K+L Y +E + + P +R++ +++ D
Sbjct: 428 DAAKQICWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S ++KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE-- 928
+ L Q +++F K+H+ + L +Y CA +K P E
Sbjct: 903 QYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRAH 957
Query: 929 -KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKA 987
+Q L I + + + +V S PEY++PY +H AH PD + +D++
Sbjct: 958 ARQCLVKNITVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQ 1013
Query: 988 FELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNS 1044
+ V L+F++ +L+ K+E+ S + I + +IK ++D D ++
Sbjct: 1014 LKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDTKMNEKL 1065
Query: 1045 HAICDLGLSI 1054
+ +CD+ ++I
Sbjct: 1066 YTVCDVAMNI 1075
>sp|Q498H0|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis
GN=pds5b-a PE=1 SV=1
Length = 1448
Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 267/1088 (24%), Positives = 493/1088 (45%), Gaps = 73/1088 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLN---AIVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKEQYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL ++ L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q +++ +L R D V VR+ ++ L+ P A + L R D +E +R
Sbjct: 310 QNKTLWQCYLGRFNDIHVPVRLECVKFASHSLVNHPDLAK--DLTDYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A L + + + V ER DK V++ M LA I++ L+ G
Sbjct: 368 HDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQAEAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ + WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 ESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDTN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ ++ L L ++ + + I K++ V++R+ +P K +
Sbjct: 488 AVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITRNLPDPGKGQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + L L+ S QA D+ K LG K FL +
Sbjct: 544 DFLKKFTQVLEDDEKIRGQLEKLVSPTCSCKQAEVCVRDITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKLVNKSIDGTADDEDEGVTTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L++ +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLQQKAKKGPP 723
Query: 701 RQAKYAVHALAAI--TKDDGLKSL-SVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVF 757
RQAKY++H + AI +K+ + L+K L E+ L L S+G IAQ A F
Sbjct: 724 RQAKYSIHCIQAIFSSKETQFAQIFEPLHKSLDPGNPEQ--LITSLVSIGHIAQLAPDQF 781
Query: 758 ETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKD 813
+S + F+ +L T W D+ S +KI IK +V+ L +K+
Sbjct: 782 TAPLKSMVATFVVKDLLMTDRLPGKKTTKLWVSDDEVSTETKVKIQAIKMMVRWLLGMKN 841
Query: 814 AHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPV 871
+ G L ++ + + G+++E + S D + LRLA+A A+++L+++ + I +
Sbjct: 842 NLSKSGNSTLRLLMAILHTDGDLTEHGKLSKPDMSRLRLAAASAIVKLAQEPCYHEIITL 901
Query: 872 DVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE- 928
+ + L Q ++LF K+H+ + L +Y CA +K P E
Sbjct: 902 EQYQLCALVINDECYQVRQLFAQKIHKGLSRLRLPLEYMAICALC-----AKDPVKERRA 956
Query: 929 --KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVK 986
+Q L I + + + +V F+ PEY++PY VH AH PD + +D++
Sbjct: 957 HARQCLVKNINVRREYLKQHAAVSEKL--FSLLPEYVVPYTVHLLAHD--PDYVKVQDIE 1012
Query: 987 AFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHA 1046
+ + L+F++ +L+ K+E+ ++ I ++ + K ++ D ++ +
Sbjct: 1013 QLKDIKECLWFVLEILMSKNEN-----NSHAFIRKMVEYIKQTKDGQNPDDQKMNEKMYT 1067
Query: 1047 ICDLGLSI 1054
+CD+ ++I
Sbjct: 1068 VCDVAMNI 1075
>sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens
GN=PDS5A PE=1 SV=1
Length = 1337
Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 266/1085 (24%), Positives = 487/1085 (44%), Gaps = 67/1085 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ T D ++K LK +++Q + + P + L++
Sbjct: 29 VKEITDKI-----TTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNP 82
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +L
Sbjct: 83 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLL 142
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186
E LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + +
Sbjct: 143 ENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVT 202
Query: 187 EDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHI 243
++LL +I L +N N + LA ++++ +EA I F + R S +
Sbjct: 203 QELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVL-GRSSVSDL 261
Query: 244 DYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQF 301
H ++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 262 SEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQN 321
Query: 302 HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQ 361
++ FL R D V VR+ ++ CL+ P A + L R D +E +R
Sbjct: 322 RPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIRHD 379
Query: 362 VVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSIN 421
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 380 VIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEA 439
Query: 422 QNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM 480
+ WI K+L Y +E + L P ++R++ +++ D +
Sbjct: 440 AEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAV 499
Query: 481 KALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEEN 539
KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 500 KALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQDF 555
Query: 540 FLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM-- 594
+Q L D + + LL S T S QA R+ K+ K FL +
Sbjct: 556 VKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFLL 615
Query: 595 -KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLG 644
+ + + + E + ++ +E A ++ + ++S +++L +L+ P
Sbjct: 616 ERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELLKVLSFTHPTSFH 675
Query: 645 GTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
E E L+ L+ E++ + E + + G I L S++ +L + G+ Q
Sbjct: 676 SAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQ 735
Query: 703 AKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET- 759
AK AVH + AI + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 736 AKQAVHCIHAIFTNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASP 794
Query: 760 RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAHI 816
+S + FI +L W E+ L K+ IK LV+ L +K+
Sbjct: 795 MKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQS 854
Query: 817 RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDV 873
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 855 KSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQ 913
Query: 874 FHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLA 933
F L Q +++F K+H+ + LL +Y F + +Q L
Sbjct: 914 FQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLL 973
Query: 934 DIIQMHHQ-MKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 992
I + + +K ++ + + PEY++PY++H AH PD +DV +
Sbjct: 974 KNISIRREYIKQNPMATEK---LLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIK 1028
Query: 993 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS---HAICD 1049
L+F++ +L+ K+E+ S + + + +IK + D +SK + + +CD
Sbjct: 1029 ECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCD 1080
Query: 1050 LGLSI 1054
+ L +
Sbjct: 1081 VALCV 1085
>sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus
GN=Pds5a PE=2 SV=1
Length = 1333
Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 265/1085 (24%), Positives = 487/1085 (44%), Gaps = 67/1085 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ T D ++K LK +++Q + + P + L++
Sbjct: 28 VKEITDKI-----TTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNP 81
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +L
Sbjct: 82 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLL 141
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186
E LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + +
Sbjct: 142 ENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVT 201
Query: 187 EDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHI 243
++LL +I L +N N + LA ++++ +EA I F + R S +
Sbjct: 202 QELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVL-GRSSVSDL 260
Query: 244 DYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQF 301
H ++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 261 SEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQN 320
Query: 302 HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQ 361
++ FL R D V VR+ ++ CL+ P A + L R D +E +R
Sbjct: 321 RPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIRHD 378
Query: 362 VVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSIN 421
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 379 VIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEA 438
Query: 422 QNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM 480
+ WI K+L Y +E + L P ++R++ +++ D +
Sbjct: 439 AEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAV 498
Query: 481 KALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEEN 539
KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 499 KALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQDF 554
Query: 540 FLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM-- 594
+Q L D + + LL S T S QA R+ K+ K FL +
Sbjct: 555 VKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFLL 614
Query: 595 -KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLG 644
+ + + + E + ++ +E A ++ + ++S +++L +L+ P
Sbjct: 615 ERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVLSFTHPTSFH 674
Query: 645 GTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
E E L+ L+ E++ + E + + G I L S++ +L + G+ Q
Sbjct: 675 SAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQ 734
Query: 703 AKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET- 759
AK AVH + AI + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 735 AKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASP 793
Query: 760 RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAHI 816
+S + FI +L W E+ L K+ IK LV+ L +K+
Sbjct: 794 MKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQS 853
Query: 817 RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDV 873
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 854 KSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQ 912
Query: 874 FHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLA 933
F L Q +++F K+H+ + LL +Y F + +Q L
Sbjct: 913 FQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLL 972
Query: 934 DIIQMHHQ-MKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 992
I + + +K ++ + + PEY++PY++H AH PD +DV +
Sbjct: 973 KNISIRREYIKQNPMATE---KLLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIK 1027
Query: 993 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS---HAICD 1049
L+F++ +L+ K+E+ S + + + +IK + D ++K + + +CD
Sbjct: 1028 ECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDEAKTNEKLYTVCD 1079
Query: 1050 LGLSI 1054
+ L +
Sbjct: 1080 VALCV 1084
>sp|A1L1F4|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio
GN=pds5a PE=2 SV=1
Length = 1320
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 259/1065 (24%), Positives = 480/1065 (45%), Gaps = 63/1065 (5%)
Query: 64 LLKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGR 122
L++ +KDV+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R
Sbjct: 73 FLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNR 132
Query: 123 RVVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEE 181
+LE LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E
Sbjct: 133 YFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIME 192
Query: 182 SEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSM-SGDSR 237
+ + ++LL +L L +N N A LA ++++ +E I F + G S
Sbjct: 193 GDGVTQELLDTILINLIPAHKNLNKQAYDLARTLLKRTVQTIETCIASFFNQVLVMGKSS 252
Query: 238 PGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
++I +++ P +L V+P L +L ++ + RL V L+ LF S
Sbjct: 253 VSDLSEHVFDLIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVVKLLAKLFGAKDSEL 312
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ FL R D V VR+ ++ CL+ P A D + L R D +E
Sbjct: 313 ATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEE 369
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I + LN + + + V ER+ DK V++ M LA +F+ CL +
Sbjct: 370 AIRHDVIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMMGLAQLFKKYCLHHE 429
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + + WI K+L Y +E + + P +++++ +++
Sbjct: 430 AGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLETEEKMKCLYYLYACL 489
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFC-FRVMSRSFAEPA 534
D +KAL ++ + + L+ ++ L L ++ E +F ++++ +P
Sbjct: 490 DTNAVKALNEMWKCQNMLRGLVRELLDLHKL----PTSEANTSAMFGKLMTIAKNLPDPG 545
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTG-RDDLLKILGAKHRLYDFLST 591
KA++ +Q+ +D + L L+ S QA R+ K+ K FL
Sbjct: 546 KAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTFPKQPTNPFLEM 605
Query: 592 LSM---KCSYLLFNKEHVKEI--LLEVAAQKSSANA-------QFMQSCMDILGILARFS 639
+ + + + + E + + LL + + ++ + +++ +++L +L+
Sbjct: 606 VKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLKVLSFTH 665
Query: 640 PLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLE 697
P E E L+ LK E++ + E + + G I +L S++ +L +
Sbjct: 666 PTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQIRSTLIPILHQKAKR 725
Query: 698 GSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMP 755
G+ QAK AVH + AI + ++ L+ +++ L L L L SLG I+ A
Sbjct: 726 GTPHQAKQAVHCIHAIFHNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPD 784
Query: 756 VFET-RESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPV 811
F + +S + FI +L + N W D+ S L K+ IK LV+ L +
Sbjct: 785 QFASPMKSIVANFIVKDLLMNDRSVGNKNGRLWTADDEVSPEVLAKVQAIKLLVRWLLGM 844
Query: 812 KDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKI 869
K+ + L ++S G+++E + S D + LRLA+ A+L+L+++ + I
Sbjct: 845 KNNQSKSANSTLRLPSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAILKLAQEPCYHDII 904
Query: 870 PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEK 929
+ F L Q ++++ K+H + LL +Y F + +
Sbjct: 905 TPEQFQLCGLVINDECYQVRQIYAQKLHVALVKLLLPLEYMAVFALCAKDPVKERRAHAR 964
Query: 930 QNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFE 989
Q L I + + + + + + PEY++PY++H AH PD+ + +D++
Sbjct: 965 QCLLKNISVRREYIKQ--NPMAHEKLLSLLPEYVVPYMIHLLAHD--PDLTKPQDLEQLR 1020
Query: 990 LVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHA 1046
V L+F++ +L+ K+E+ S S + + +IK ++D D ++ +
Sbjct: 1021 DVKECLWFMLEVLMTKNEN--------NSHSFLRKMVENIKQTKDAQCPDDPKANEKLYI 1072
Query: 1047 ICDLGLSI--TKRLSRMEDNSQGVFSSVSLPSTLYKPYEKKEGDD 1089
+CD+ L + K S D+ + LPS Y P +K+ +D
Sbjct: 1073 VCDVALFVIANKSTSCHLDSPKDPV----LPSKFYTPPDKEFVND 1113
>sp|Q5F3V3|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus
GN=PDS5A PE=2 SV=2
Length = 1330
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 268/1083 (24%), Positives = 485/1083 (44%), Gaps = 66/1083 (6%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQ--PFLNAIVQPVLLKHQDK 70
G K T T D +VK LK +++Q S E Q P + L++ +K
Sbjct: 22 GVKETTDKITNDEVVKRLKMVVKTFMDMDQD---SEDEKQQYLPLALHLASEFFLRNPNK 78
Query: 71 DVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILET 129
DV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE
Sbjct: 79 DVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLEN 138
Query: 130 LAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQED 188
LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++
Sbjct: 139 LAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQE 198
Query: 189 LL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHID 244
LL +I L +N N A LA ++++ +E I F + G S
Sbjct: 199 LLDSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEH 258
Query: 245 YHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSV 304
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q +
Sbjct: 259 VFDLILELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPL 318
Query: 305 FSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVA 364
+ FL R D V VR+ ++ CL+ P A + L R D +E +R V+
Sbjct: 319 WQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIRHDVIV 376
Query: 365 VICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNE 424
I L+ + + + V ER DK V++ M LA +++ CL G +
Sbjct: 377 TIITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEK 436
Query: 425 FEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKAL 483
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 437 VSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKAL 496
Query: 484 EKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLI 542
++ + + L+ ++ L L +Q + ++ + K++ ++++ +P KA++
Sbjct: 497 NEMWKCQNMLRSHVRELLDLHKQPTSEANSAAMFGKLM----TIAKNLPDPGKAQDFVKK 552
Query: 543 LDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KC 596
+Q L D + + LL S T S QA R+ K+ K FL + +
Sbjct: 553 FNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERI 612
Query: 597 SYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLGGTE 647
+ + + E + ++ +E A ++ + +++ +++L +L+ P E
Sbjct: 613 APVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAE 672
Query: 648 --EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKY 705
E L+ L+ E++ + E + + G I L S++ +L + G+ QAK
Sbjct: 673 TYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQ 732
Query: 706 AVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET-RES 762
AVH + AI + ++ L+ +++ L L L L SLG I+ A F + +S
Sbjct: 733 AVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKS 791
Query: 763 EIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAHIRPG 819
+ F+ +L W E+ L K+ IK LV+ L +K+ +
Sbjct: 792 VVANFVVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSK-S 850
Query: 820 IDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHL 876
+ L +L +ML S G+++E S D + LRLA+ A+++L+++ + I + F L
Sbjct: 851 ANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQL 910
Query: 877 TLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADII 936
Q +++F K+H+ + LL +Y F +K P +E + + +
Sbjct: 911 CALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC---AKDP-VKERRAHARQCL 966
Query: 937 QMHHQMKARQISVQSDANS--FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCR 994
+ ++ I AN + PEY++PY++H AH PD + +DV V
Sbjct: 967 LKNISIRREYIKQNPMANEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDVDQLRDVKEC 1024
Query: 995 LYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS---HAICDLG 1051
L+F++ +L+ K+E+ S + + + +IK + D + K + + +CD+
Sbjct: 1025 LWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVA 1076
Query: 1052 LSI 1054
L +
Sbjct: 1077 LCV 1079
>sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus
GN=Pds5a PE=3 SV=3
Length = 1332
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 266/1085 (24%), Positives = 488/1085 (44%), Gaps = 67/1085 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ T D ++K LK +++Q + + P + L++
Sbjct: 28 VKEITDKI-----TTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNP 81
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +L
Sbjct: 82 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLL 141
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186
E LA +S + +LE C+E+ +++ T F+V ++ H V M +M ++ E + +
Sbjct: 142 ENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNTKVQMHMLDLMSSIIMEGDGVT 201
Query: 187 EDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHI 243
++LL +I L +N N + LA ++++ +EA I F + R S +
Sbjct: 202 QELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVL-GRSSVSDL 260
Query: 244 DYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQF 301
H ++I +++ PQ+L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 261 SEHVFDLIQELFAIDPQLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQN 320
Query: 302 HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQ 361
++ FL R D V VR+ ++ CL+ P A + L R D +E +R
Sbjct: 321 RPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIRHD 378
Query: 362 VVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSIN 421
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 379 VIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEA 438
Query: 422 QNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM 480
+ WI K+L Y +E + L P ++R++ +++ D +
Sbjct: 439 AEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAV 498
Query: 481 KALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEEN 539
KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 499 KALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQDF 554
Query: 540 FLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM-- 594
+Q L D + + LL S T S QA R+ K+ K FL +
Sbjct: 555 VKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLL 614
Query: 595 -KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLG 644
+ + + + E + ++ +E A ++ + ++S +++L +L+ P
Sbjct: 615 ERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVLSFTHPTSFH 674
Query: 645 GTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
E E L+ L+ E++ + E + + G I L S++ +L + G+ Q
Sbjct: 675 SAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQ 734
Query: 703 AKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET- 759
AK AVH + AI + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 735 AKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASP 793
Query: 760 RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAHI 816
+S + FI +L W E+ L K+Y ++ LV+ L +K+
Sbjct: 794 MKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVYLLRLLVRWLLGMKNNQS 853
Query: 817 RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDV 873
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 854 KSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQ 912
Query: 874 FHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLA 933
F L Q +++F K+H+ + LL +Y F + +Q L
Sbjct: 913 FQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLL 972
Query: 934 DIIQMHHQ-MKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 992
I + + +K ++ + + PEY++PY++H AH PD +DV +
Sbjct: 973 KNISIRREYIKQNPMATEK---LLSLLPEYVVPYMIHLLAHD--PDFTRSQDVDQLRDIK 1027
Query: 993 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS---HAICD 1049
L+F++ +L+ K+E+ S + + + +IK + D +SK + + +CD
Sbjct: 1028 ECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCD 1079
Query: 1050 LGLSI 1054
+ L +
Sbjct: 1080 VALCV 1084
>sp|Q4QXM3|PD5AA_XENLA Sister chromatid cohesion protein PDS5 homolog A-A OS=Xenopus laevis
GN=pds5a-a PE=1 SV=1
Length = 1323
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 309/1314 (23%), Positives = 572/1314 (43%), Gaps = 104/1314 (7%)
Query: 13 GSKLETPPSTK--------DGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVL 64
G + PP K D +VK LK +++Q + + P +
Sbjct: 12 GKSIIYPPGVKEITDKISNDEVVKRLKMVVKTYMDMDQDSEEEKQQYL-PLALHLSSEFF 70
Query: 65 LKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRR 123
L++ +KDV+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R
Sbjct: 71 LRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRY 130
Query: 124 VVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEES 182
+LE LA +S + +LE C+E+ +++ T F+V ++ H + V M +M + E
Sbjct: 131 FYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEG 190
Query: 183 EDI---QEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRP 238
+ + Q D ++I L + +N N A LA ++++ A +E I F + G S
Sbjct: 191 DGVTQEQLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSV 250
Query: 239 GHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANN 298
++I +++ P +L V+P L +L ++ + RL V L+ LF S
Sbjct: 251 SDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLA 310
Query: 299 EQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDEN 357
Q ++ FL R D V VR+ ++ CL+ P A D + L R D +E
Sbjct: 311 TQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEA 367
Query: 358 VRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFN 417
+R V+ I A L + + + V ER DK V++ M LA +++ CL
Sbjct: 368 IRHDVIVTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEG 427
Query: 418 GSINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFD 476
G + WI K+L Y +E + L P ++R++ +++ D
Sbjct: 428 GKDAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLD 487
Query: 477 RIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAK 535
+KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P K
Sbjct: 488 PNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGK 543
Query: 536 AEENFLILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFLSTL 592
A++ +Q+ +D + L L+ + S QA RD K+ K FL +
Sbjct: 544 AQDFVKKFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFLEMV 603
Query: 593 SM---KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSP 640
+ + + + E + ++ +E A ++ + +++ +++L +L+ P
Sbjct: 604 KFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLKVLSFTHP 663
Query: 641 LLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEG 698
E E L+ L+ E++ + E + + G I L S++ +L + G
Sbjct: 664 TSFHSDETYESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRG 723
Query: 699 SRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPV 756
+ QAK AVH + +I + ++ L+ +++ L L L L SLG I+ A
Sbjct: 724 TPHQAKQAVHCIHSIFSNKEVQ-LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQ 782
Query: 757 FET-RESEIEEFIKSKILRC--SNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVK 812
F + +S + FI +L SN +N C D+ S L K IK LV+ L +K
Sbjct: 783 FASPMKSVVANFIVKDLLMNDRSNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMK 842
Query: 813 DAHIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKI 869
+ + + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I
Sbjct: 843 NNQSK-SANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEII 901
Query: 870 PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEK 929
+ F L Q +++F K+H+ + L +Y F + +
Sbjct: 902 TPEQFQLCALVINDECYQVRQIFAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHAR 961
Query: 930 QNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFE 989
Q L I + + +Q V S+ + PEY++PY++H AH PD + +D+
Sbjct: 962 QCLLKNISIRREY-IKQNPV-SNEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLR 1017
Query: 990 LVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHA 1046
+ L+F++ +L+ K+E+ S + + + +IK + D D ++
Sbjct: 1018 DIKECLWFMLEVLMTKNEN--------NSHAFMKKLCENIKQTRDAQAPDDPKANEKLFT 1069
Query: 1047 ICDLGLSITKRLSRMEDNSQGVFSSVSLPSTLYKPYEKKEGDDSLASERQTWLADES--V 1104
+CD+ L + S +S+ V LP T + + D +S ++++ DE+ +
Sbjct: 1070 VCDVALCVVYNKS-APCHSESSKDPV-LPLTFF-----TQPDKDFSS--KSYITDEARNL 1120
Query: 1105 LTHFESLKLETHEVVGSEIARHEALDDLEKDGNEVPLGKMIQQLKSQGAKGGKAKKKKSS 1164
L + + +V + G+E+ I + + A ++ S
Sbjct: 1121 LLTGKPKPMTVLGMVNKPLNATGRRPYSRSTGSEISNNVSI----NSESDASVANRQSSE 1176
Query: 1165 PAEVKGTENDVDILQMV------------REINLDNLGVLNKFESSNGHKHFPSKQIKVD 1212
E+ +END + ++++ +E+NLD N + G K + +
Sbjct: 1177 VPEIGVSENDENPVRLISVPPAKTETVKNKEVNLDQTAPSNT-GTERGKKRSAASAGAEN 1235
Query: 1213 LENEEIKKRKATDVTSFPVPKRRRSLSAHGGFRTPKSNSKAPLRASGGGSHHAG 1266
+ E +++KA ++++ P PK RR R PKS S+ + S +G
Sbjct: 1236 IRKES-EEKKADNISATPTPKPRRG-------RPPKSESQGSAAKNDETSKPSG 1281
>sp|Q4KLU7|PD5AB_XENLA Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus laevis
GN=pds5a-b PE=1 SV=1
Length = 1323
Score = 247 bits (630), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 307/1314 (23%), Positives = 573/1314 (43%), Gaps = 109/1314 (8%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ + D +VK LK +++Q + + P + L++
Sbjct: 21 VKEITDKI-----SNDEVVKRLKMVVKTFMDMDQDSEEEKQQYL-PLALHLSSDFFLRNP 74
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R +L
Sbjct: 75 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLL 134
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDI- 185
E LA +S + +LE C+E+ +++ T F+V ++ H + V M +M + E + +
Sbjct: 135 ENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVT 194
Query: 186 --QEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSH 242
Q D ++I L + +N N A LA ++++ A +E I F + G S
Sbjct: 195 QEQLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSVSDLS 254
Query: 243 IDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFH 302
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 255 EHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNR 314
Query: 303 SVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQ 361
++ FL R D V VR+ ++ CL+ P A D + L R D +E +R
Sbjct: 315 PLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHD 371
Query: 362 VVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSIN 421
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 372 VIVTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEGGKDA 431
Query: 422 QNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM 480
+ WI K+L Y +E + L P ++R++ +++ D +
Sbjct: 432 AEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLDPNAV 491
Query: 481 KALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEEN 539
KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 492 KALNEMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGKAQDF 547
Query: 540 FLILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM-- 594
+Q+ +D + L L+ + S QA RD K+ K FL +
Sbjct: 548 VKKFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFLEMVKFLL 607
Query: 595 -KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLG 644
+ + + + E + ++ +E A ++ + +++ +++L +L+ P
Sbjct: 608 ERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLKVLSFTHPTSFH 667
Query: 645 GTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
E E L+ L+ E++ + E + + G I L S++ +L + G+ Q
Sbjct: 668 SDETYESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRGTPHQ 727
Query: 703 AKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET- 759
AK AVH + +I + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 728 AKQAVHCIHSIFSNKEVQ-LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQFASP 786
Query: 760 RESEIEEFIKSKILRC--SNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVKDAHI 816
+S + FI +L SN +N C D+ S L K IK LV+ L +K+
Sbjct: 787 MKSVVANFIVKDLLMNDRSNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQS 846
Query: 817 RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDV 873
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 847 K-SANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQ 905
Query: 874 FHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLA 933
F L Q +++F K+H+ + L +Y F + +Q L
Sbjct: 906 FQLCALVINDECYQVRQIFAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHARQCLL 965
Query: 934 DIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYC 993
I + + +Q V S+ + PEY++PY++H AH PD + +D+ +
Sbjct: 966 KNISIRREY-IKQNPV-SNEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLRDIKE 1021
Query: 994 RLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICDL 1050
L+F++ +L+ K+E+ S + + + +IK + D D ++ +CD+
Sbjct: 1022 CLWFMLEVLMTKNEN--------NSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDV 1073
Query: 1051 GLSITKRLSRMEDNSQGVFSSVS----LPSTLYKPYEKKEGDDSLASERQTWLADES--V 1104
L + + + S S S LP T + + D +S ++++ DE+ +
Sbjct: 1074 ALCV------VYNKSAPCHSESSKDPVLPLTFF-----TQPDKDFSS--KSYITDEARNL 1120
Query: 1105 LTHFESLKLETHEVVGSEIARHEALDDLEKDGNEVPLGKMIQQLKSQGAKGGKAKKKKSS 1164
L + + +V + G+E+ I + + A ++ S
Sbjct: 1121 LLTGKPKPMTVLGMVNKPLNATGRRPYSRSTGSEISNNVSI----NSESDASVANRQSSE 1176
Query: 1165 PAEVKGTENDVDILQMV------------REINLDNLGVLNKFESSNGHKHFPSKQIKVD 1212
E+ +END + ++++ +E+NLD N + G K + +
Sbjct: 1177 VPEIGVSENDENPVRLISVPPAKTETVKNKEVNLDQTAPSNT-GTERGKKRSAASAGAEN 1235
Query: 1213 LENEEIKKRKATDVTSFPVPKRRRSLSAHGGFRTPKSNSKAPLRASGGGSHHAG 1266
+ E +++K ++++ P PK RR R PKS S+ + S +G
Sbjct: 1236 IRKES-EEKKVDNISATPTPKPRRG-------RPPKSESQGSAAKNDETSKPSG 1281
>sp|Q9HFF5|PDS5_SCHPO Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pds5 PE=1 SV=1
Length = 1205
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 264/1130 (23%), Positives = 485/1130 (42%), Gaps = 136/1130 (12%)
Query: 20 PSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATC 79
P T ++K L+ L+ L+Q +++ P ++V LL H+DK ++ C
Sbjct: 17 PLTTSEILKRLRDLLGELTSLSQDTIDR--DSVLPVARSLVNNNLLHHKDKGIRSYTLCC 74
Query: 80 ICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVM 139
I E+ R+ AP+AP++ L+DIFQ+I+ SGL + + + ILE+L+ +S V++
Sbjct: 75 IVELLRLCAPDAPFTLSQLEDIFQVILKILSGLMNQESTYYPQIYEILESLSNVKSAVLI 134
Query: 140 LDL-ECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSAL- 197
+DL +E + ++ FF +A ++V M I+ L+ E I L IL + L
Sbjct: 135 VDLPNAEEFLVNIFRLFFDLARKGTTKNVEFYMLDIINQLINEINTIPAAALNILFAQLI 194
Query: 198 -GRNKNDT-----------ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHS---- 241
G+ T A +LA N+ A +L+ + Q+ S + DSR S
Sbjct: 195 SGKGVRQTIGSSDSTNHGPAFQLARNIFHDSADRLQRYVCQYF-SDIIFDSRDSLSDSMT 253
Query: 242 ---HIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANN 298
I H ++ +++ +P L ++P EL +Q RL A+ VG + +A
Sbjct: 254 TPEFIFSHNLVLQLWKYAPTTLLNIIPQFENELQAEQTSVRLVAIETVG--LMLQDNAIW 311
Query: 299 EQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQ-ILTALCDRLLDFDEN 357
+ V+S F RL D+ VA R+ +E + L + ++ + ++ L +L D DE
Sbjct: 312 SDYPRVWSAFCGRLNDKSVACRIKCIEVASNALQNSLATSEIIENVVQMLQSKLADTDEK 371
Query: 358 VRKQVVAVICDVACHALN-SIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
VR + I + V+ +KL+ +RLRD+ + V+ + L+ I+ R +
Sbjct: 372 VRVATLKTIEQLTFETFKMQFSVQALKLMGDRLRDRKLNVRLQAIRTLSQIYN----RAY 427
Query: 417 NGSINQNE-----FEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRI 471
I+ E F WIP +L Y D ++ + L S + R R+
Sbjct: 428 QDLIDGVEYSIQMFSWIPSSLLEVFYVNDETTNAAVEICMAELVLQYLSSDTQTR-LNRL 486
Query: 472 FSG---FDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQ----DGDAPEIQKKILFCFR 524
F F M+ +L+++ + + + Y+ + + D D I K+
Sbjct: 487 FLSIKYFSEKAMRVFILLLQRQVKYSELLNYYIECCKNYNGGVMDNDEESITNKLKKVID 546
Query: 525 VMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHR 584
++S + P E F +L D +K+L+ + + L K R
Sbjct: 547 IISSKSSNPTLTEATFRKFAELNDRQSYKMLLQTFSIKSEYQVVLKSIKYLFK------R 600
Query: 585 LYDFLSTLSMKC--------SYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILA 636
+ + LST S++C + FNK +V EI+ + N F++ +L L
Sbjct: 601 VSETLSTASLECFRIFVYRSALFAFNKSNVHEIIQLLNEPVKYHN--FLKPSEALLQHLP 658
Query: 637 RFSPLLLGGTEEELVNLLKEENEIIKEGILH----VLAKAGGTIREQLAATSSSVDLLLE 692
P + G +++ EN I+ GI + A + + R++ + ++ +L
Sbjct: 659 LIHPNIYGEV------VIEVENIIVSSGIESDPKVIKALSQFSKRKKNFSIQTTTAEILR 712
Query: 693 RLCLEGSRRQAKYAVHALAAI-TKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQ 751
+LCL G++ QAK A +A TK+ L ++ +V+ LE LP L +LG +
Sbjct: 713 KLCLHGTQEQAKQAATIIAITETKEFKLDMIT----NIVENLEYNGGLPVRLMTLGQLFL 768
Query: 752 TAMPVFETRESEIEEFIKSKIL-RCSNK---IRNDTKAC-WDDRSELCLLKIYGIKTLVK 806
+ E ++ EF+ K++ R K ND + C ++ L + K+ I+ LV
Sbjct: 769 YTLEEVEKVADQVTEFLVKKVIQRFPEKYDDTHNDEEWCTYEKLDNLTMCKVLAIRVLVN 828
Query: 807 SYLPVKDA----HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLS 862
+I I LL +L +++ GE+S + + +A+LRL ++K L+L
Sbjct: 829 RLRAAAGGTEALNIGAPIIKLLKVL--LMADGELSPFKNTPKISRAYLRLTASKYFLKLC 886
Query: 863 RQWDHKIPVDVFHLTLRT-PEISFP------QAKKLFLSKVHQYVKDRLLD-AKYACAFL 914
IP H+ + +IS + LFL+K+ + ++ + L + Y FL
Sbjct: 887 -----SIPFYAEHIDFSSYVQISLLCQDENFDVRNLFLTKLQKQLQLKKLPISYYPLLFL 941
Query: 915 FGITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHH 974
+ EEE + A I Q++ + F EY+ YL+H +HH
Sbjct: 942 TAVDP------EEEIKTKASI------WIRSQVAFFQKTHDFTM--EYVATYLIHLLSHH 987
Query: 975 SCPDIDECKDVKAFELV-YCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSE 1033
PDI + + + + Y R Y N E++ ++ + + IK S
Sbjct: 988 --PDISSIESENSLDFIAYIRFYV-------------DTVVNSENVPIVFHLMQRIKQSY 1032
Query: 1034 DIVDAAKSKNSHAICDLGLSITKRLSRMEDNSQGVFSSVSLPSTLYKPYE 1083
D+++ + + + D+ +++ +++ + G +S + P + PYE
Sbjct: 1033 DVIEDGNNY-IYVLSDMA----QKILQVKSQNFG-WSLTTYPKQIKLPYE 1076
>sp|Q04264|PDS5_YEAST Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PDS5 PE=1 SV=1
Length = 1277
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 214/1022 (20%), Positives = 423/1022 (41%), Gaps = 129/1022 (12%)
Query: 49 LEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGT 108
L + + +A+V LLKH+D ++ A C+ +I R+ AP+APY+D L DIF+L++
Sbjct: 49 LTGLDKYRDALVSRKLLKHKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQ 108
Query: 109 FSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDL-ECDELVNEMYSTFFAVASDDHPESV 167
F L D ++ ++ L +YRS V++ DL + L+ E++ F+ + P +
Sbjct: 109 FEQLGDQENGYHIQQTYLITKLLEYRSIVLLADLPSSNNLLIELFHIFYD-PNKSFPARL 167
Query: 168 LSSMQTIMIVLLEESEDIQEDLLVILLSA-LGRNKNDTARRLAMNVIEQCAGKLEAGIKQ 226
+ + I+ ++ E + + ++L ++ + L N N+ +NV C ++ +
Sbjct: 168 FNVIGGILGEVISEFDSVPLEVLRLIFNKFLTYNPNEIPE--GLNVTSDCGYEVSLILCD 225
Query: 227 FLVSSMS------------------GDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLT 268
+ MS +SR + H+++ ++ P++++ V+ ++
Sbjct: 226 TYSNRMSRHLTKYYSEIIHEATNDDNNSRLLTVVVKLHKLVLRLWETVPELINAVIGFIY 285
Query: 269 GELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHS-VFSEFLKRLTDRIVAVRMSVLEHV 327
EL ++ R +A L+G + N HS F ++ ++ D VR+ E +
Sbjct: 286 HELSSENELFRKEATKLIGQILTSYSDLNFVSTHSDTFKAWISKIADISPDVRVEWTESI 345
Query: 328 KSCLLTDPSRADAPQILT-ALCDRLLDFDENVRKQVVAVICDVACHALNSIPV-ETVKLV 385
+ T R D + L AL +D D VR+ V + N +PV E K +
Sbjct: 346 PQIIAT---REDISKELNQALAKTFIDSDPRVRRTSVMI--------FNKVPVTEIWKNI 394
Query: 386 AERLRDKSVL-VKRYTMERLADIFRGCCLRNFNGSIN------QNEFEW-----IPGKIL 433
+ S+L + R + + ++ + ++ S+N QN+ W IP +
Sbjct: 395 TNKAIYTSLLHLAREKHKEVRELCINTMAKFYSNSLNEIERTYQNKEIWEIIDTIPSTLY 454
Query: 434 RCLYDKDFG-SDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQR 492
Y D ++ ++SV+ L P RV + + S FD+ + ++ +
Sbjct: 455 NLYYINDLNINEQVDSVIFEYLLPFEPDNDKRVHRLLTVLSHFDKKAFTSFFAFNARQIK 514
Query: 493 LQQEMQRYLSLRQMHQDGDA------PEIQKKILFCFRVMSRSFAEPAKAEENFLILDQL 546
+ + +Y+ + + ++ P + K + ++ ++ KA + + Q
Sbjct: 515 ISFAISKYIDFSKFLNNQESMSSSQGPIVMNKYNQTLQWLASGLSDSTKAIDALETIKQF 574
Query: 547 KDANVWKILMNLLDSNTSFDQAFTGRDDLLKIL-------------GAKHRLYDF---LS 590
D ++ +L + ++ F ++L+ L GA D +
Sbjct: 575 NDERIFYLLNACVTNDIPFLTFKNCYNELVSKLQTPGLFKKYNISTGASIMPRDIAKVIQ 634
Query: 591 TLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEEL 650
L + S +++N ++ +LL ++ ++++A+ + IL +++ +P L L
Sbjct: 635 ILLFRASPIIYNVSNI-SVLLNLS---NNSDAKQLDLKRRILDDISKVNPTLFKDQIRTL 690
Query: 651 VNLLK-------EENEIIK-EGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
++K E+N+ + E L L KA T+++Q+ + L +E
Sbjct: 691 KTIIKDLDDPDAEKNDNLSLEEALKTLYKASKTLKDQVDFDDTFFFTKLYDFAVESKPEI 750
Query: 703 AKYAVHALAAITK-DDGLKSLSVLYKRLVDM-LEEKTHLPAVLQSLGCIAQTAMPVFETR 760
KYA +A K ++ LK + + R++ + L++ + + + L I + V
Sbjct: 751 TKYATKLIALSPKAEETLKKIKI---RILPLDLQKDKYFTSHIIVLMEIFKKFPHVLNDD 807
Query: 761 ESEIEEFIKSKILRCSNKIRNDTKA--CWDDRSELCLLKIYGI--KTLVKSYLPVKDAHI 816
++I ++ ++L SN++ D+K W + S L K I K K I
Sbjct: 808 STDIISYLIKEVL-LSNQVVGDSKKEIDWVEDSLLSDTKYSAIGNKVFTLKLFTNKLRSI 866
Query: 817 RPGI--DDLLGIL--KSM-------LSYGEM-----SEDIESSSVDKAHLRLASAKAVLR 860
P + D+L K+M S GE+ E + S + LR + VL+
Sbjct: 867 APDVPRDELAESFTEKTMKLFFYLIASGGELISEFNKEFYPTPSNYQTKLRCVAGIQVLK 926
Query: 861 LSR--QWDHKI-PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGI 917
L+R ++ I P D+ L + S P +K FL ++ YV + L+ K+ F
Sbjct: 927 LARISNLNNFIKPSDIIKLINLVEDESLP-VRKTFLEQLKDYVANELISIKFLPLVFFTA 985
Query: 918 TESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCP 977
E P+ E K I +K+ + T E +P L+H AHH P
Sbjct: 986 YE---PDV-ELKTTTKIWINFTFGLKSFKK---------GTIFERALPRLIHAIAHH--P 1030
Query: 978 DI 979
DI
Sbjct: 1031 DI 1032
>sp|Q552Q7|PDS5_DICDI Sister chromatid cohesion protein PDS5 homolog OS=Dictyostelium
discoideum GN=pds5 PE=3 SV=1
Length = 1450
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 234/1132 (20%), Positives = 459/1132 (40%), Gaps = 168/1132 (14%)
Query: 50 EAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTF 109
E ++ L ++ P ++ +++L+ + C+ EI RI AP P+ VLK +F+L
Sbjct: 194 EGLEIVLEVLIDPKFADNKIFEIRLMTSCCLSEIFRIYAPTLPFDMVVLKVVFKLFTEQV 253
Query: 110 SGLKDTGGPSFGRRVVILETLA--KYRSCVVMLDLECDELVNEMYSTFFA-----VASDD 162
F + +LE L+ K + + ++D + M + FF V D
Sbjct: 254 LQGDKVDKKLFPQYFQMLERLSVIKVFALLALVD-------SSMLTPFFKDCLSRVHGDK 306
Query: 163 HPESVLSSMQTIMIVLLEESEDIQEDLLVILLSAL-GRNKNDTARRLAM---NVIEQCAG 218
+ + T++ +LE E++ L LL +L R K A+ ++IE +
Sbjct: 307 EHQPMDIMFSTLLNTILESLEEVPTSLWNELLESLIEREKGGVPTSKAIFTHDLIETNSR 366
Query: 219 KLEAGIKQFLV------------------SSMSGDSRPGHSHIDYHEVIYDVYRCSPQIL 260
L+ FL SS+S + +E++++++ P+ +
Sbjct: 367 FLQVHFDLFLQDLLEPEILAGGQQQQQQDSSLSNNGISKQLKKKKNEILFEMFNILPEFI 426
Query: 261 SGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE---QFHSVFSEFLKRLTDRIV 317
+ L +L R A ++ ++ SA++E Q ++++ FL R D +
Sbjct: 427 YPALQNLEFDLEDVNASIRKGAAIVLSRCYST-ESASDELIAQRPTLYTTFLNRFHDVDI 485
Query: 318 AVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSI 377
+R ++E S T S + ++L ++ DR D + ++R + + + +
Sbjct: 486 KIRTVMMEF--SEHFTTTSDLEMERVLKSVRDRFRDSEPDIRIKAIQIFQKYIIKNPELM 543
Query: 378 PVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQ------NEFEWIPGK 431
E + ER+RDK V++ L+ ++R +R G I+ + F IP
Sbjct: 544 NPELMSEYLERVRDKDSKVRKDAEISLSTVWRS--VREKYGPIDDWSNTLIDCFSTIPNT 601
Query: 432 ILRC--LYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQ 489
++ C LYD D IE L P VK+R + ++ I+ D + +K LE+
Sbjct: 602 LIHCLGLYDDD--KYRIEIAFDSILLPQHSDVKNRSQVFLEIYKYLDESNKQLFKKYLEE 659
Query: 490 KQRLQQEMQRYLSLRQMHQD-----GDAPEIQKK-------------------------- 518
K+ L+QE +L+L Q ++ G KK
Sbjct: 660 KKSLRQE---FLALIQFLKNPKVVGGSTTPTSKKSQPPQQQQQQQQQQQQQLQQPENDIE 716
Query: 519 --ILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLL 576
I ++ + E +K LI + + +L+ + D NT+F + + + ++
Sbjct: 717 VYITHVDNLLPKFIGESSKKLVRQLITPS--NKKILDLLVLISDINTTFQEQYNIKISII 774
Query: 577 KILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSAN----------AQF-- 624
+ +F+ + K +Y + KE++K +L + + N +F
Sbjct: 775 SKAQNESSFSEFIKYMVNKLAYSIVGKENIKYLLRGLRSDLGLDNFDKNNPIDLLEEFNE 834
Query: 625 ----------MQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGG 674
+ +++L +L++ + ++LV L I+ +L +L+ +
Sbjct: 835 KIYEKEVKDGVPETLEVLLMLSQVYANIFDDYGDQLVGFLTCSKSIVY-PVLQILSNSWK 893
Query: 675 TIREQLAATSSSVDLLLE-------RLCLEGSRRQAKYAVHALAAITKDDG-------LK 720
T++ S++D+LL L + K+A AL +I +G +
Sbjct: 894 TLKLSKKTLKSTLDMLLRLTQVPQPTLARLAFKTFIKFATPALTSINSTNGKVDNNKLVV 953
Query: 721 SLSVLYKRLVDMLEEKT-HLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKI 779
+L L L D LE+K+ +L ++L+ +GC+A+ V ++ + KI+ +
Sbjct: 954 TLKDLANNLFDQLEDKSKNLLSILEVIGCLAKGYSLVLSEHLDTLDILLIKKIMTGVCTL 1013
Query: 780 RNDTKACWD---------DRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSM 830
+ K + S+ L+KI IK + L +++ I +++ +L
Sbjct: 1014 DFNQKVQLNKSVEHHLNTSYSKDVLIKIAAIKCMSNYLLGLRE--ITKKSHEMVNMLFEF 1071
Query: 831 LSYGEMSEDIESSSVDKAHLRLASAKAVLRLSR--QWDHKIPVDVFHLTLRTPEISF--- 885
Y + ++ + ++K+HL++ A +LR+ + Q++ +I F L + I+
Sbjct: 1072 --YIGLDKNKTYNDLEKSHLKIHIAIGLLRVFQRSQYEKEITPQQFILICNSTSITTKQR 1129
Query: 886 --PQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQMK 943
P ++L + +R L KY AF + S +++ II+ +
Sbjct: 1130 GDPLIRRLIEKLAKVMILNR-LPMKYMAAFGMAAQQPYSV-LALVRKHSTSIIKTRRMVI 1187
Query: 944 ARQISVQSDANSFAT-YPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLYFIVSML 1002
+R + S A + YPE +PY ++ +H D +D + C L F + +L
Sbjct: 1188 SRLAASLSMAKNLTEFYPESSMPYFLYVVSHRE----DFERDAPDYIESACYLNFFIDLL 1243
Query: 1003 IHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHAICDLGLSI 1054
+ EA N S+I +IF +K S D +D KSKN +LGL I
Sbjct: 1244 VE-------EADN---YSIIHTIFTKLKRSTDALD-KKSKNHIIAAELGLQI 1284
>sp|A5G4T3|SYFA_GEOUR Phenylalanine--tRNA ligase alpha subunit OS=Geobacter
uraniireducens (strain Rf4) GN=pheS PE=3 SV=1
Length = 338
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 706 AVHALAAITKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIE 765
AV L+ ++ +DGL+ L V Y L +K L AV++ LG ++ PV + ++
Sbjct: 12 AVAELSQVSTEDGLQELRVKY------LGKKGELTAVMKGLGALSPEERPVIGQVVNTVK 65
Query: 766 EFIKSKILRCSNKIRNDTKA 785
+++KI KIR D KA
Sbjct: 66 GELEAKIESAGLKIREDIKA 85
>sp|Q54FI3|PKS37_DICDI Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB
PE=2 SV=1
Length = 2968
Score = 38.1 bits (87), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 38 SELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDV 97
+EL PP++ E+ V P++ + + D +AT I EI+ I AP Y DV
Sbjct: 2578 NELTSPPPSAKRES--------VLPIISEDNNSDNDSSMATVIYEISPIAAPYHRYQTDV 2629
Query: 98 LKDIFQL 104
LK+I QL
Sbjct: 2630 LKEITQL 2636
>sp|Q5UP89|YR009_MIMIV Uncharacterized protein R9 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R9 PE=3 SV=1
Length = 376
Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 246 HEVIYDVYRCSPQILSGV--VPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHS 303
++ I+D+ C P++L+G+ Y ELLT Q + K++ L LF +
Sbjct: 133 YQTIFDIEICKPELLAGIDESKYNLDELLTKQTLSETKSLALKKMLFMKTFGITDSSHQE 192
Query: 304 VFSEFLKRLTDRIVAVR 320
F EF +IV +R
Sbjct: 193 EFIEFYNEYASKIVIIR 209
>sp|A7TJS7|SPB4_VANPO ATP-dependent rRNA helicase SPB4 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=SPB4 PE=3 SV=1
Length = 607
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFS 306
+V+ D S + +S V+P + + T++K G L P +Q HSVF
Sbjct: 46 DVVVDSVTGSGKTVSFVIPIFEKIVQEEANTTKMKK-GHFHSLIVSPTKELAKQIHSVFE 104
Query: 307 EFLKRLTDRIVAVRMSVLEHVKSCLLTDPSR---ADAPQILTALCDRLLDF 354
FL+ + + +R +L + D + PQIL R+LDF
Sbjct: 105 SFLEHYPENLYPIRSQLLVGTNVKTVRDDVSDFMENKPQILIGTPGRILDF 155
>sp|B1JBC0|HIS8_PSEPW Histidinol-phosphate aminotransferase OS=Pseudomonas putida (strain
W619) GN=hisC PE=3 SV=1
Length = 348
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 346 ALCDRLLDFDENVRKQVVAVICDVACHALNSI----PVETVKLVAERLRDKSVLVKRYTM 401
A C +++D E + +Q+ A +V A N I P E +A RLR++ V+V+ +
Sbjct: 264 ATCRKVIDSREALVEQLTAKGFEVLPSAANFIFARHPQEDAAQLAARLREQGVIVRHFKQ 323
Query: 402 ERLADIFR 409
+R+A R
Sbjct: 324 QRIAQFLR 331
>sp|Q18H65|CAAL_HALWD Carboxylate-amine ligase HQ_2566A OS=Haloquadratum walsbyi (strain
DSM 16790) GN=HQ_2566A PE=3 SV=1
Length = 363
Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 655 KEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLE 697
+E N + +G+ +LA+ GG +++ S ++D LLE LCL+
Sbjct: 318 RETNRLGVDGLTTLLAREGGAKKQRRLHASDNIDTLLESLCLD 360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,675,205
Number of Sequences: 539616
Number of extensions: 20843845
Number of successful extensions: 66339
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 65989
Number of HSP's gapped (non-prelim): 310
length of query: 1393
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1263
effective length of database: 121,419,379
effective search space: 153352675677
effective search space used: 153352675677
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)