Query 000609
Match_columns 1393
No_of_seqs 170 out of 295
Neff 6.0
Searched_HMMs 13730
Date Tue Mar 26 17:26:50 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000609.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_380-383//hhsearch_scop/000609hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u6gc_ a.118.1.2 (C:) Cullin- 99.5 1E-09 7.5E-14 78.9 59.6 367 29-411 20-462 (1207)
2 d2vglb_ a.118.1.10 (B:) Adapti 99.5 2.5E-09 1.8E-13 76.3 31.8 123 245-373 66-188 (579)
3 d1b3ua_ a.118.1.2 (A:) Constan 99.5 3.6E-09 2.6E-13 75.3 32.3 24 65-88 19-42 (588)
4 d1b3ua_ a.118.1.2 (A:) Constan 99.5 4.8E-09 3.5E-13 74.5 35.7 151 256-410 81-233 (588)
5 d2vglb_ a.118.1.10 (B:) Adapti 99.1 3E-07 2.2E-11 62.4 37.8 394 265-759 13-424 (579)
6 d2bpta1 a.118.1.1 (A:1-861) Im 98.7 7.6E-06 5.5E-10 53.0 52.5 140 631-770 579-730 (861)
7 d1qbkb_ a.118.1.1 (B:) Karyoph 98.7 7.7E-06 5.6E-10 53.0 38.1 69 340-408 393-464 (888)
8 d1u6gc_ a.118.1.2 (C:) Cullin- 98.7 1.1E-05 8.2E-10 51.9 59.2 159 273-436 341-525 (1207)
9 d1qbkb_ a.118.1.1 (B:) Karyoph 98.6 2.4E-05 1.8E-09 49.7 32.2 106 264-369 174-281 (888)
10 d2vgla_ a.118.1.10 (A:) Adapti 98.5 3.2E-05 2.3E-09 48.9 30.7 124 245-373 86-210 (584)
11 d2vgla_ a.118.1.10 (A:) Adapti 98.3 0.00012 8.8E-09 45.0 24.1 85 624-714 337-424 (584)
12 d1ibrb_ a.118.1.1 (B:) Importi 97.8 0.001 7.4E-08 38.8 32.9 91 317-408 341-435 (458)
13 d1oyza_ a.118.1.16 (A:) Hypoth 97.8 0.00088 6.4E-08 39.2 13.8 128 265-406 22-150 (276)
14 d1te4a_ a.118.1.16 (A:) MTH187 97.7 5.9E-06 4.3E-10 53.8 2.4 109 271-405 1-109 (111)
15 d2bpta1 a.118.1.1 (A:1-861) Im 97.7 0.0015 1.1E-07 37.6 46.1 148 263-410 135-296 (861)
16 d1q1sc_ a.118.1.1 (C:) Importi 97.2 0.0059 4.3E-07 33.7 12.5 22 270-291 21-42 (434)
17 d1oyza_ a.118.1.16 (A:) Hypoth 97.1 0.0072 5.3E-07 33.1 12.8 96 305-410 21-117 (276)
18 d1te4a_ a.118.1.16 (A:) MTH187 97.0 0.0019 1.4E-07 37.0 8.2 85 265-367 25-109 (111)
19 d1xqra1 a.118.1.21 (A:87-350) 97.0 0.001 7.5E-08 38.8 6.6 146 262-409 59-215 (264)
20 d1wa5b_ a.118.1.1 (B:) Karyoph 96.8 0.013 9.1E-07 31.5 11.7 145 261-407 75-231 (503)
21 d1ibrb_ a.118.1.1 (B:) Importi 96.7 0.015 1.1E-06 31.0 26.1 55 349-407 7-63 (458)
22 d1qgra_ a.118.1.1 (A:) Importi 96.3 0.025 1.8E-06 29.5 44.1 96 315-411 340-439 (876)
23 d1wa5b_ a.118.1.1 (B:) Karyoph 95.8 0.04 2.9E-06 28.1 18.9 17 351-367 339-355 (503)
24 d1jdha_ a.118.1.1 (A:) beta-Ca 93.6 0.15 1.1E-05 24.3 26.4 28 263-290 18-45 (529)
25 d1xqra1 a.118.1.21 (A:87-350) 92.9 0.055 4E-06 27.2 4.1 96 314-409 70-173 (264)
26 d1q1sc_ a.118.1.1 (C:) Importi 92.7 0.2 1.5E-05 23.5 25.2 146 264-409 190-343 (434)
27 d1lrva_ a.118.1.5 (A:) Leucine 92.1 0.084 6.1E-06 26.0 4.2 14 350-363 122-135 (233)
28 d1jdha_ a.118.1.1 (A:) beta-Ca 91.9 0.25 1.8E-05 22.8 23.5 68 341-408 16-88 (529)
29 d1lrva_ a.118.1.5 (A:) Leucine 90.9 0.074 5.4E-06 26.4 2.9 13 350-362 98-110 (233)
30 d1lsha1 a.118.4.1 (A:285-620) 90.8 0.32 2.3E-05 22.1 16.8 16 848-863 224-239 (336)
31 d1lsha1 a.118.4.1 (A:285-620) 90.5 0.34 2.5E-05 21.9 11.9 51 846-901 258-308 (336)
32 d1qgra_ a.118.1.1 (A:) Importi 87.7 0.53 3.9E-05 20.6 59.4 147 263-409 129-288 (876)
33 d1wa5c_ a.118.1.1 (C:) Exporti 42.5 5.7 0.00041 13.7 30.4 129 30-182 20-154 (959)
34 d1upka_ a.118.1.15 (A:) Mo25 p 41.5 5.9 0.00043 13.6 19.4 101 266-367 204-322 (330)
35 d1xm9a1 a.118.1.24 (A:244-700) 30.3 8.8 0.00064 12.5 24.3 109 263-409 3-116 (457)
36 d1h2vc2 a.118.1.14 (C:291-480) 20.6 13 0.00097 11.3 3.2 63 242-310 79-145 (190)
No 1
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1e-09 Score=78.89 Aligned_cols=367 Identities=14% Similarity=0.147 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999863179994313873899999732021105898203899999887887521999999915899999999982
Q 000609 29 LLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGT 108 (1393)
Q Consensus 29 rL~~l~~~Ls~~dQ~~~~~~~~sl~~~~~~Lv~~~LL~HkD~~Vr~~vAcCLadIlRI~APdAPytd~~LkdIF~l~v~q 108 (1393)
|...+.+-+..+.++....+.+..+.+...|.+ +|.-++.+||..+.-||..+..- . ..+++..+...++..
T Consensus 20 R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~--~L~D~~~~Vq~~A~k~l~~l~~~-~-----~~~~~~~l~~~L~~~ 91 (1207)
T d1u6gc_ 20 RFMATNDLMTELQKDSIKLDDDSERKVVKMILK--LLEDKNGEVQNLAVKCLGPLVSK-V-----KEYQVETIVDTLCTN 91 (1207)
T ss_dssp HHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHH--HTTCSSHHHHHHHHHHHHHHHTT-S-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHH-C-----CHHHHHHHHHHHHHH
T ss_conf 999999999987230144576889999999999--96799879999999999999976-7-----686699999999998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHH-HHHHHHHCCCCC-CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 26998889987246999999997-432532101698-4189999999999742389814099999999999960234465
Q 000609 109 FSGLKDTGGPSFGRRVVILETLA-KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186 (1393)
Q Consensus 109 l~~L~d~~~p~f~q~~~lLe~la-~vks~vl~~DL~-~~~Li~~lF~~ff~~v~~~~~~~v~~~m~~IL~~iI~Ese~ip 186 (1393)
+. +.+...-.-....|.++- +.-.. ...-. ...+...+...+.+.........+.....+++..++.-....-
T Consensus 92 l~---~~~~~~r~~~~~~L~~i~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l 166 (1207)
T d1u6gc_ 92 ML---SDKEQLRDISSIGLKTVIGELPPA--SSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLL 166 (1207)
T ss_dssp TT---CSSSHHHHHHHHHHHHHHHHCC-------CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HC---CCCHHHHHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56---896326599999999999966320--0231127889999999998763477778999999999999998756766
Q ss_pred ----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf ----889999999613798578999999999996554-----46999999997305999998873038899999984163
Q 000609 187 ----EDLLVILLSALGRNKNDTARRLAMNVIEQCAGK-----LEAGIKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSP 257 (1393)
Q Consensus 187 ----~~vLd~IL~~l~~~~~~~a~~lA~~ii~~~~dk-----L~~~i~q~f~~~l~~d~~~~~~~~~~h~Li~eL~~~~P 257 (1393)
.+++..++..+...+ ..-++-|...+..-+.. +...+...+..+....+ ......+-..+-.|.+..|
T Consensus 167 ~~~~~~il~~l~~~l~~~~-~~vR~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~~--~~~~~~~~~~l~~l~~~~~ 243 (1207)
T d1u6gc_ 167 VNFHPSILTCLLPQLTSPR-LAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDS--MSTTRTYIQCIAAISRQAG 243 (1207)
T ss_dssp TTTHHHHHHHHGGGGGCSS-HHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHTCS--SCSCTTHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHHHHCC
T ss_conf 8779999999998808999-899999999999999877998799999999998705998--8999999999999998761
Q ss_pred HHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHH-----------------------
Q ss_conf 134----41232120123578868999999999986258998701003999999982-----------------------
Q 000609 258 QIL----SGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLK----------------------- 310 (1393)
Q Consensus 258 ~lL----~~ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~----------------------- 310 (1393)
..+ ..++|.+...+..++.++|..|.+.++.+...-+..+...++.++...+.
T Consensus 244 ~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~ 323 (1207)
T d1u6gc_ 244 HRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDAD 323 (1207)
T ss_dssp GGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 54677799999999988258617778999999999998674654455999999999987407300034678877655540
Q ss_pred --------------CCCCCCHHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf --------------0069991299999999688772199999--867899999877079536899999999999643215
Q 000609 311 --------------RLTDRIVAVRMSVLEHVKSCLLTDPSRA--DAPQILTALCDRLLDFDENVRKQVVAVICDVACHAL 374 (1393)
Q Consensus 311 --------------R~~D~s~~VR~~~v~~~~~iL~~~p~~~--~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l 374 (1393)
-..|.+..||...+++...++.+.|... ...++.+.+..++.|.++.||.+++.++..+.....
T Consensus 324 ~~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~~l~~~~~~~l~~~~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~~~~~ 403 (1207)
T d1u6gc_ 324 GGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTR 403 (1207)
T ss_dssp ------------------CTTHHHHHHHHHHHHHHTTCCTTHHHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 11013566788875220133899999999998689888999999999999999998459854899999999999997303
Q ss_pred CCC----------------------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 888----------------------9888999997603689269999999999999986
Q 000609 375 NSI----------------------PVETVKLVAERLRDKSVLVKRYTMERLADIFRGC 411 (1393)
Q Consensus 375 ~~v----------------------~~e~L~~l~eR~rDKK~~VR~eAi~~La~LY~~~ 411 (1393)
... -..++..+...++++...+|..++..+..+....
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~ 462 (1207)
T d1u6gc_ 404 PVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVL 462 (1207)
T ss_dssp CC------------CCCHHHHHHHHTTHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 21255515488876302699999876999999999864886567888999999999972
No 2
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.5e-09 Score=76.34 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 88999999841631344123212012357886899999999998625899870100399999998200699912999999
Q 000609 245 YHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVL 324 (1393)
Q Consensus 245 ~h~Li~eL~~~~P~lL~~ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v 324 (1393)
.|--+..+.+..|+++.-+++.+-..|.+.|..+|.+|.+++|.+-. + ++. +.+.....+-..|.+|.||...+
T Consensus 66 ~yl~l~~~~~~~~d~~~l~intl~kDl~d~n~~iR~lALr~L~~i~~-~--~i~---~~l~~~l~~~L~D~~p~VRk~Aa 139 (579)
T d2vglb_ 66 VYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRV-D--KIT---EYLCEPLRKCLKDEDPYVRKTAA 139 (579)
T ss_dssp HHHHHHHHHHHSHHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCCS-G--GGH---HHHHHHHHHHSSCSCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC-H--HHH---HHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999996767852999999999988699999999999999874898-8--899---99999999987057689999999
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9968877219999986789999987707953689999999999964321
Q 000609 325 EHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHA 373 (1393)
Q Consensus 325 ~~~~~iL~~~p~~~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~ 373 (1393)
-++..+...+|.........+.+...|.|.|..||.+|+.+++++....
T Consensus 140 ~~l~kl~~~~p~~~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~ 188 (579)
T d2vglb_ 140 VCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESH 188 (579)
T ss_dssp HHHHHHHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9999886328144456657899999873999289999999999998858
No 3
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.6e-09 Score=75.31 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=12.5
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 058982038999998878875219
Q 000609 65 LKHQDKDVKLLVATCICEITRITA 88 (1393)
Q Consensus 65 L~HkD~~Vr~~vAcCLadIlRI~A 88 (1393)
|+|.|..||...+--|..|-+.-.
T Consensus 19 l~~~~~~~R~~a~~~l~~ia~~lg 42 (588)
T d1b3ua_ 19 LRNEDVQLRLNSIKKLSTIALALG 42 (588)
T ss_dssp TTCSCHHHHHHHHHTHHHHHHHSC
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 669998999999999999999849
No 4
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.8e-09 Score=74.46 Aligned_cols=151 Identities=17% Similarity=0.177 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHCC
Q ss_conf 6313441232120123578868999999999986258998701003999999982006-999129999999968877219
Q 000609 256 SPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLT-DRIVAVRMSVLEHVKSCLLTD 334 (1393)
Q Consensus 256 ~P~lL~~ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~-D~s~~VR~~~v~~~~~iL~~~ 334 (1393)
.|+....++|.++.-+..++..+|..|++.++.+....+ .......+..++.+.. +....+|..++...+.++...
T Consensus 81 ~~~~~~~ll~~l~~l~~~~~~~Vr~~a~~~l~~i~~~~~---~~~~~~~l~p~i~~L~~~~~~~~r~~a~~ll~~~~~~~ 157 (588)
T d1b3ua_ 81 GPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHS---PSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRV 157 (588)
T ss_dssp SGGGGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSC---HHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTS
T ss_pred CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 746899999999998069988999999999999998679---88899999999999864631479999999999999986
Q ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999986789999987707953689999999999964321-5888988899999760368926999999999999998
Q 000609 335 PSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHA-LNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRG 410 (1393)
Q Consensus 335 p~~~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~-l~~v~~e~L~~l~eR~rDKK~~VR~eAi~~La~LY~~ 410 (1393)
+.....++...+...+.|.+..||.+++.+++.++... ...+...++..+...+.|..+.||..|+..++.+...
T Consensus 158 -~~~~~~~l~~~~~~l~~D~~~~VR~~a~~~l~~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~ 233 (588)
T d1b3ua_ 158 -SSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQL 233 (588)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf -1899999999999985169989999999999989987157877999999999974488524678999888776305
No 5
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=3e-07 Score=62.43 Aligned_cols=394 Identities=11% Similarity=0.096 Sum_probs=185.6
Q ss_pred HHHCCCCCCCCHHHHHHHH-HHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 2120123578868999999-999986258998701003999999982006999129999999968877219999986789
Q 000609 265 PYLTGELLTDQLDTRLKAV-GLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQI 343 (1393)
Q Consensus 265 P~Le~eL~aed~~~Rl~At-~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~~~ei 343 (1393)
-.|..+|.+.+...|..|. +++.-|.-+ -+...-|+++-+. ....+.++|...--++..+...+|+ ...-+
T Consensus 13 ~eir~~L~s~~~~~r~~al~kli~~~~~G--~d~s~l~~~vi~~----~~s~d~~~Kkl~yl~l~~~~~~~~d--~~~l~ 84 (579)
T d2vglb_ 13 FELKAELNNEKKEKRKEAVKKVIAAMTVG--KDVSSLFPDVVNC----MQTDNLELKKLVYLYLMNYAKSQPD--MAIMA 84 (579)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHTT--CCCGGGHHHHHHT----TSSSCHHHHHHHHHHHHHHHHHSHH--HHHTT
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHH----HCCCCHHHHHHHHHHHHHHCCCCCC--HHHHH
T ss_conf 99999866999899999999999999779--9840589999978----1899999999999999996767852--99999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 99998770795368999999999996432158889888999997603689269999999999999986321049985200
Q 000609 344 LTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQN 423 (1393)
Q Consensus 344 ~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~v~~e~L~~l~eR~rDKK~~VR~eAi~~La~LY~~~~~~~~~~~~~~~ 423 (1393)
+..|.+-|.|+++.||..|+.+++.+... .+-..++..+...+.|+.+.||+.|+.+++++|..... ...
T Consensus 85 intl~kDl~d~n~~iR~lALr~L~~i~~~---~i~~~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~p~-------~~~ 154 (579)
T d2vglb_ 85 VNSFVKDCEDPNPLIRALAVRTMGCIRVD---KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQ-------MVE 154 (579)
T ss_dssp HHHHGGGSSSSSHHHHHHHHHHHHTCCSG---GGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCC-------CHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH-------HHH
T ss_conf 99999886999999999999998748988---89999999999987057689999999999988632814-------445
Q ss_pred CCCCCHHHHHHHHCCCCCCCHHHHHHH--HCCCCCCC-----CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 016625888623202677850489984--20686999-----99-79999999999812999999999999999999999
Q 000609 424 EFEWIPGKILRCLYDKDFGSDTIESVL--CGSLFPTG-----FS-VKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQ 495 (1393)
Q Consensus 424 ~~~wIP~~IL~~~Y~~d~~~~~ve~vl--~e~LlP~~-----~~-~~~R~~~ll~l~~~LD~~~~kal~~il~~k~~l~~ 495 (1393)
..+|+|. +..+..+.+. ..+...+ ...+.+.. .+ .......++......++
T Consensus 155 ~~~~~~~-L~~lL~D~n~--~V~~~Al~~L~~I~~~~~~~~~~~l~~~~i~~Ll~~l~~~~~------------------ 213 (579)
T d2vglb_ 155 DQGFLDS-LRDLIADSNP--MVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTE------------------ 213 (579)
T ss_dssp HHHHHHH-HHHTTSCSCH--HHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCH------------------
T ss_pred HHHHHHH-HHHHHCCCCH--HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCH------------------
T ss_conf 6657899-9998739992--899999999999988585100678519999999826578987------------------
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99999999844138993899999999999987633994468899999884100879999999736799999899999999
Q 000609 496 EMQRYLSLRQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDL 575 (1393)
Q Consensus 496 ~~~~~l~l~~~~~~~d~~ei~~kl~~~i~~Ls~~fpD~~Ka~~~L~kf~klnD~ri~klLk~~idp~td~~tv~~a~keL 575 (1393)
..+..+ ++.++...|...... ..++.. +
T Consensus 214 ------------------~~q~~i---l~~L~~~~~~~~~~~--------------~~li~~-----------------l 241 (579)
T d2vglb_ 214 ------------------WGQIFI---LDCLSNYNPKDDREA--------------QSICER-----------------V 241 (579)
T ss_dssp ------------------HHHHHH---HHHHHTSCCCSHHHH--------------HHHHHH-----------------H
T ss_pred ------------------HHHHHH---HHHHHHHCCCCHHHH--------------HHHHHH-----------------H
T ss_conf ------------------899999---999998477877899--------------999999-----------------9
Q ss_pred HHHHCCCCC--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 999568987--599999999851002556668999999999-----6126301464788999999998529957345599
Q 000609 576 LKILGAKHR--LYDFLSTLSMKCSYLLFNKEHVKEILLEVA-----AQKSSANAQFMQSCMDILGILARFSPLLLGGTEE 648 (1393)
Q Consensus 576 lkkL~~~~~--l~d~l~~Ll~R~S~li~Nks~V~~Ll~~~~-----~~~~~~~~~~~~~a~eLL~~IS~~~P~lFk~~~~ 648 (1393)
...+.+.++ ..+.++.++.-..+...+.+....+++.+. -...+. .....+.+.+..++..+|.+|..+..
T Consensus 242 ~~~L~~~n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~L~s~~~--ei~y~aL~~i~~l~~~~p~~l~~~~~ 319 (579)
T d2vglb_ 242 TPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEP--EVQYVALRNINLIVQKRPEILKQEIK 319 (579)
T ss_dssp TTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHHTHHHHHHHTTSCH--HHHHHHHHHHHHHHHHCCSTTTTCTT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 9987375689999999999998721874148999999974677778744882--48999999999999747999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 99999741021003669999998602047642105621899999884059958899999999962178732139999999
Q 000609 649 ELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKR 728 (1393)
Q Consensus 649 ~L~~lL~~~~~~~~~~aL~iLa~~~~~~~e~~~~~~~~l~~~L~~lal~Gtp~qAK~Av~~Laa~~~~~~~~~~~~L~~~ 728 (1393)
.+.-. .+++..+...+|.++...... ++ -..+...|..++.+.++...+.|+++|+.+...-. .....++..
T Consensus 320 ~~~~~-~~d~~~ik~~~L~iL~~l~~~--~n----~~~Il~eL~~y~~~~d~~~~~~ai~aI~~la~~~~-~~~~~~i~~ 391 (579)
T d2vglb_ 320 VFFVK-YNDPIYVKLEKLDIMIRLASQ--AN----IAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVE-QSAERCVST 391 (579)
T ss_dssp TTSCC-TTSCHHHHHHHHHHHHHTCCS--ST----HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCH-HHHHHHHHH
T ss_pred HHHHH-CCCHHHHHHHHHHHHHHHCCH--HH----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC-HHHHHHHHH
T ss_conf 98862-288589999999999987386--54----99999999998555899999999999999887385-289999999
Q ss_pred HHHHHHHCC--CCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 998621159--9843889999999331433135
Q 000609 729 LVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET 759 (1393)
Q Consensus 729 Lv~~L~~~~--~l~~~L~sLa~Ia~~ap~vfe~ 759 (1393)
+.+.+.... -....+.++..|.+..|..++.
T Consensus 392 Ll~ll~~~~~~v~~e~i~~i~~i~~~~p~~~~~ 424 (579)
T d2vglb_ 392 LLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYES 424 (579)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHSCSSCCT
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 999983885568999999999999969688999
No 6
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.75 E-value=7.6e-06 Score=53.04 Aligned_cols=140 Identities=16% Similarity=0.194 Sum_probs=53.1
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHH----C-CCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
Q ss_conf 99999852995734559999999741----0-210036699999986020476421056218999998840599588999
Q 000609 631 ILGILARFSPLLLGGTEEELVNLLKE----E-NEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKY 705 (1393)
Q Consensus 631 LL~~IS~~~P~lFk~~~~~L~~lL~~----~-~~~~~~~aL~iLa~~~~~~~e~~~~~~~~l~~~L~~lal~Gtp~qAK~ 705 (1393)
.+..+...+|..+....+.+...+.. . +..+.+.++.+++.....+.+.+.+.-..+.+.|........+.....
T Consensus 579 ~l~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~~~~~l~~i~p~l~~~l~~~~~~v~~~ 658 (861)
T d2bpta1 579 VLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSIT 658 (861)
T ss_dssp HHHHHHHHCGGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 99999861536579999999999751001588365887899999888877457899999997059998737998899999
Q ss_pred HHHHHHHHCCCCCC---CHHHHHHHHHHHHHHHC-CC---CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 99999962178732---13999999999862115-99---84388999999933143313515789999998
Q 000609 706 AVHALAAITKDDGL---KSLSVLYKRLVDMLEEK-TH---LPAVLQSLGCIAQTAMPVFETRESEIEEFIKS 770 (1393)
Q Consensus 706 Av~~Laa~~~~~~~---~~~~~L~~~Lv~~L~~~-~~---l~~~L~sLa~Ia~~ap~vfe~~~~eI~~fiik 770 (1393)
|+.+++.+...-+. .+...++..+...+... .+ -++.+.+||.|+...+..|...-+.+...+.+
T Consensus 659 a~~~l~~i~~~~~~~~~~~~~~i~~~L~~~l~~~~~~~~~k~~~~~~l~~i~~~~~~~~~~~l~~~~~~l~~ 730 (861)
T d2bpta1 659 AVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVA 730 (861)
T ss_dssp HHHHHHHHHHHTGGGGHHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999975787271199999999998578888899999999999999999879889999999999999
No 7
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=7.7e-06 Score=52.98 Aligned_cols=69 Identities=23% Similarity=0.240 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 678999998770795368999999999996432---158889888999997603689269999999999999
Q 000609 340 APQILTALCDRLLDFDENVRKQVVAVICDVACH---ALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIF 408 (1393)
Q Consensus 340 ~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~---~l~~v~~e~L~~l~eR~rDKK~~VR~eAi~~La~LY 408 (1393)
...+++.+...+.++++++|.+++.+++.++.. .+...=.+++..+...+.|.++.||..|+..|+++-
T Consensus 393 l~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~ 464 (888)
T d1qbkb_ 393 LPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYA 464 (888)
T ss_dssp HHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 999999988751220568999999986435555787742120355679998426998999999999999999
No 8
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=1.1e-05 Score=51.90 Aligned_cols=159 Identities=15% Similarity=0.169 Sum_probs=95.3
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC---------------
Q ss_conf 78868999999999986258998701003999999982006999129999999968877219999---------------
Q 000609 273 TDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSR--------------- 337 (1393)
Q Consensus 273 aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~--------------- 337 (1393)
.....+|..|+++++.++...+..+..-|+.++..++.++.|....||...+.+...++......
T Consensus 341 d~s~~vR~~a~~~L~~l~~~~~~~l~~~~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 420 (1207)
T d1u6gc_ 341 DMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGET 420 (1207)
T ss_dssp -CTTHHHHHHHHHHHHHHTTCCTTHHHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC------------CCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCC
T ss_conf 13389999999999868988899999999999999999845985489999999999999730321255515488876302
Q ss_pred ------CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHCCCCH--HHHHHHHHHHHH
Q ss_conf ------98678999998770795368999999999996432158889---8889999976036892--699999999999
Q 000609 338 ------ADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIP---VETVKLVAERLRDKSV--LVKRYTMERLAD 406 (1393)
Q Consensus 338 ------~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~v~---~e~L~~l~eR~rDKK~--~VR~eAi~~La~ 406 (1393)
.....+++.+...+.|...++|.++...+.++.......+. ..++..+...+.|+.. .+|..++..++.
T Consensus 421 ~~~~l~~~~~~i~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~~~l~~~l~~~~~~i~~~l~~~~~~~~~~~~al~~l~~ 500 (1207)
T d1u6gc_ 421 PLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYV 500 (1207)
T ss_dssp HHHHHHHHTTHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 69999987699999999986488656788899999999997225777766756789999976026416888999999999
Q ss_pred HHHHHHHHCCCCCCCHHCCCCCHHHHHHHH
Q ss_conf 999863210499852000166258886232
Q 000609 407 IFRGCCLRNFNGSINQNEFEWIPGKILRCL 436 (1393)
Q Consensus 407 LY~~~~~~~~~~~~~~~~~~wIP~~IL~~~ 436 (1393)
+...+..+ .....+.+|...++.+.
T Consensus 501 l~~~~~~~-----~~~~~~~~l~~~~~~~~ 525 (1207)
T d1u6gc_ 501 ILCNHSPQ-----VFHPHVQALVPPVVACV 525 (1207)
T ss_dssp HHHSSCGG-----GGHHHHTTTHHHHHHHH
T ss_pred HHHHCCHH-----HHHHHHHHHHHHHHHHH
T ss_conf 98722678-----89999876334688887
No 9
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=2.4e-05 Score=49.66 Aligned_cols=106 Identities=19% Similarity=0.143 Sum_probs=58.2
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC--CCHH
Q ss_conf 32120123578868999999999986258998701003999999982006999129999999968877219999--9867
Q 000609 264 VPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSR--ADAP 341 (1393)
Q Consensus 264 iP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~--~~~~ 341 (1393)
+|.+-.-+..++..+|..|+.+++.++......+....+.+.........|.++.||...+++...++...|+. ....
T Consensus 174 l~~ll~~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~l~~~l~ 253 (888)
T d1qbkb_ 174 IPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFTENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMH 253 (888)
T ss_dssp THHHHTGGGSSSSCSSSTTTHHHHGGGGCCCSTTCSHHHHCSHHHHTTSSCCCSSSTTHHHHTTTTTSCSCTTTTTTTTT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999986388889999999987778874038899999999998887607930677999999999899876788899888
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 8999998770795368999999999996
Q 000609 342 QILTALCDRLLDFDENVRKQVVAVICDV 369 (1393)
Q Consensus 342 ei~~~L~~rL~D~DekVR~aaV~ai~~l 369 (1393)
.+++.+...+.|.||.||.+|+..+..+
T Consensus 254 ~i~~~~l~~~~~~~e~v~~~a~ef~~~~ 281 (888)
T d1qbkb_ 254 NIVEYMLQRTQDQDENVALEACEFWLTL 281 (888)
T ss_dssp TTTTTTTTTTTSSCHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 7899999862898689999889999999
No 10
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.52 E-value=3.2e-05 Score=48.88 Aligned_cols=124 Identities=11% Similarity=0.008 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH-HCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 8899999984163134412321201235788689999999999862589987010-039999999820069991299999
Q 000609 245 YHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE-QFHSVFSEFLKRLTDRIVAVRMSV 323 (1393)
Q Consensus 245 ~h~Li~eL~~~~P~lL~~ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~-~~~~~w~~fL~R~~D~s~~VR~~~ 323 (1393)
.|-.+..++.-.|+++.-++..+.-.|.+.|+.+|-+|.+++|.+... .++. -.+.+-+.. ..+|.+|.||...
T Consensus 86 gYL~l~~~~~~~~el~~L~iNtl~KDL~s~n~~ir~lALr~L~~i~~~---~i~~~l~~~V~k~l--~~~d~~p~VRk~A 160 (584)
T d2vgla_ 86 GYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGSR---EMAEAFAGEIPKIL--VAGDTMDSVKQSA 160 (584)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCH---HHHHHHTTHHHHHH--HCSSSCHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHH--CCCCCCHHHHHHH
T ss_conf 999999985899469999999999886999989999999998737998---88887789998750--3589868999999
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99968877219999986789999987707953689999999999964321
Q 000609 324 LEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHA 373 (1393)
Q Consensus 324 v~~~~~iL~~~p~~~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~ 373 (1393)
+-++..+...+|+.....++++.+...|.|.|..|+.+++.+++++....
T Consensus 161 ~l~l~ki~~~~pd~~~~~~~~~~L~~lL~D~d~~V~~aAl~ll~eI~~~~ 210 (584)
T d2vgla_ 161 ALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKN 210 (584)
T ss_dssp HHHHHHHHHHCGGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99999999869665333027999999816998248999999999999869
No 11
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.28 E-value=0.00012 Score=45.01 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCH
Q ss_conf 4788999999998529--957345599999997410-2100366999999860204764210562189999988405995
Q 000609 624 FMQSCMDILGILARFS--PLLLGGTEEELVNLLKEE-NEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700 (1393)
Q Consensus 624 ~~~~a~eLL~~IS~~~--P~lFk~~~~~L~~lL~~~-~~~~~~~aL~iLa~~~~~~~e~~~~~~~~l~~~L~~lal~Gtp 700 (1393)
..-.+++.|..++... |.++..+....+..+..+ +..+...+|.+|...... ++. ..+...|..+....++
T Consensus 337 iry~aL~~L~~L~~~~~~~~~~~~~~~~il~~l~~~~~~~Ir~~aL~lL~~L~n~--~Ni----~~Iv~eL~~yl~~~d~ 410 (584)
T d2vgla_ 337 LRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDR--SNA----QQIVAEMLSYLETADY 410 (584)
T ss_dssp HHHHHHHHHHHHTTCTTTHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHCCH--HHH----HHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCH--HHH----HHHHHHHHHHHHHCCH
T ss_conf 4999999999998147977999999999997400586149999999999996798--789----9999999998762899
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 88999999999621
Q 000609 701 RQAKYAVHALAAIT 714 (1393)
Q Consensus 701 ~qAK~Av~~Laa~~ 714 (1393)
.-.+-++++|+.+.
T Consensus 411 ~~k~~~i~~I~~la 424 (584)
T d2vgla_ 411 SIREEIVLKVAILA 424 (584)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 12
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.78 E-value=0.001 Score=38.83 Aligned_cols=91 Identities=13% Similarity=0.091 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHCCC
Q ss_conf 129999999968877219999986789999987707953689999999999964321----5888988899999760368
Q 000609 317 VAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHA----LNSIPVETVKLVAERLRDK 392 (1393)
Q Consensus 317 ~~VR~~~v~~~~~iL~~~p~~~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~----l~~v~~e~L~~l~eR~rDK 392 (1393)
..+|.....+...+....+.. ....+...+...+.|+|++||.+++.+++.++... +...-.+++..+...+.|.
T Consensus 341 ~~~~~~a~~~l~~l~~~~~~~-~~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~ 419 (458)
T d1ibrb_ 341 WNPCKAAGVCLMLLATCCEDD-IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP 419 (458)
T ss_dssp CSHHHHHHHHHHHHHHHTTTT-HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCS
T ss_pred CCHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 339999999999998755175-5667899999985699989999999999999975477678988999999999884899
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9269999999999999
Q 000609 393 SVLVKRYTMERLADIF 408 (1393)
Q Consensus 393 K~~VR~eAi~~La~LY 408 (1393)
.+.||..|+..||++-
T Consensus 420 ~~~VR~~a~~~l~~i~ 435 (458)
T d1ibrb_ 420 SVVVRDTAAWTVGRIC 435 (458)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 8999999999999999
No 13
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=97.75 E-value=0.00088 Score=39.24 Aligned_cols=128 Identities=13% Similarity=-0.050 Sum_probs=76.0
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 21201235788689999999999862589987010039999999820069991299999999688772199999867899
Q 000609 265 PYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQIL 344 (1393)
Q Consensus 265 P~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~~~ei~ 344 (1393)
..|-.-|.++|..+|..|.+.||.+-. +.++..++...+|.++.||...+...+.+-. +.. ....+.
T Consensus 22 ~~L~~~L~d~~~~vR~~A~~~L~~~~~----------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~--~~~-~~~~~~ 88 (276)
T d1oyza_ 22 DELFRLLDDHNSLKRISSARVLQLRGG----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKI--CKK-CEDNVF 88 (276)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHCC----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCC--CTT-THHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCC----------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCC-CCCCHH
T ss_conf 999988469999999999999986188----------7399999999809998999999999987202--212-120229
Q ss_pred HH-HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99-987707953689999999999964321588898889999976036892699999999999
Q 000609 345 TA-LCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLAD 406 (1393)
Q Consensus 345 ~~-L~~rL~D~DekVR~aaV~ai~~la~~~l~~v~~e~L~~l~eR~rDKK~~VR~eAi~~La~ 406 (1393)
.. +...+.|+++.||.+++.+++.+...... .....+..+..-..|..+.||..|...++.
T Consensus 89 ~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~-~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~ 150 (276)
T d1oyza_ 89 NILNNMALNDKSACVRATAIESTAQRCKKNPI-YSPKIVEQSQITAFDKSTNVRRATAFAISV 150 (276)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHTTCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 99999986699766899999999987024621-018999999998647204899999998741
No 14
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=97.73 E-value=5.9e-06 Score=53.78 Aligned_cols=109 Identities=10% Similarity=0.083 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 35788689999999999862589987010039999999820069991299999999688772199999867899999877
Q 000609 271 LLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDR 350 (1393)
Q Consensus 271 L~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~~~ei~~~L~~r 350 (1393)
|..+|..+|..|+..+|++ +. ..+...+....|.++.||...+.+.+.+- ..+.++.|...
T Consensus 1 L~D~~~~VR~~A~~aL~~~-~~----------~~~~~L~~~l~d~~~~vR~~a~~~L~~~~--------~~~~~~~L~~~ 61 (111)
T d1te4a_ 1 MADENKWVRRDVSTALSRM-GD----------EAFEPLLESLSNEDWRIRGAAAWIIGNFQ--------DERAVEPLIKL 61 (111)
T ss_dssp CCSSCCCSSSSCCSSTTSC-SS----------TTHHHHHHGGGCSCHHHHHHHHHHHGGGC--------SHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH-CH----------HHHHHHHHHHCCCCHHHHHHHHHHHHHCC--------HHHHHHHHHHH
T ss_conf 9895999999999999873-87----------89999999974998789999999987610--------12327998733
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 0795368999999999996432158889888999997603689269999999999
Q 000609 351 LLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLA 405 (1393)
Q Consensus 351 L~D~DekVR~aaV~ai~~la~~~l~~v~~e~L~~l~eR~rDKK~~VR~eAi~~La 405 (1393)
|.|.|..||.+++.+++.+. +.+.+..+...+.|..+.||+.|+..|.
T Consensus 62 l~d~~~~VR~~a~~aL~~i~-------~~~~~~~L~~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 62 LEDDSGFVRSGAARSLEQIG-------GERVRAAMEKLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHHCCTHHHHHHHHHHHHHC-------SHHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HCCCHHHHHHHHHHHHHHHC-------CCCHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 02303379999999999867-------6114999999882998999999999987
No 15
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.65 E-value=0.0015 Score=37.62 Aligned_cols=148 Identities=12% Similarity=0.191 Sum_probs=77.7
Q ss_pred HHHHHCCCCCCC-CHHHHHHHHHHHHHHHCCCCC---CHHHHCHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 232120123578-868999999999986258998---701003999999982--00699912999999996887721999
Q 000609 263 VVPYLTGELLTD-QLDTRLKAVGLVGDLFAVPGS---ANNEQFHSVFSEFLK--RLTDRIVAVRMSVLEHVKSCLLTDPS 336 (1393)
Q Consensus 263 ViP~Le~eL~ae-d~~~Rl~At~llG~mfs~~~~---~~~~~~~~~w~~fL~--R~~D~s~~VR~~~v~~~~~iL~~~p~ 336 (1393)
++|.|-.-+.++ ....|..|..+++.++...+. .+......++...+. ...+.+..||..++++...++..-+.
T Consensus 135 li~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~ 214 (861)
T d2bpta1 135 LMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKN 214 (861)
T ss_dssp HHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998569995899999999999999883477888898899999999998733347899999999999999998767
Q ss_pred ---C-CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH----HHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf ---9-9867899999877079536899999999999643215888988----8999997603689269999999999999
Q 000609 337 ---R-ADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVE----TVKLVAERLRDKSVLVKRYTMERLADIF 408 (1393)
Q Consensus 337 ---~-~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~v~~e----~L~~l~eR~rDKK~~VR~eAi~~La~LY 408 (1393)
. .....+.+.+...+.|+|+.||.+++.++..++......+... +...+..-..+....||..+++.+..+.
T Consensus 215 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~ 294 (861)
T d2bpta1 215 NMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTIC 294 (861)
T ss_dssp HHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 67766654477776798856998999999999999998877899999999899999998732754999999999999999
Q ss_pred HH
Q ss_conf 98
Q 000609 409 RG 410 (1393)
Q Consensus 409 ~~ 410 (1393)
..
T Consensus 295 ~~ 296 (861)
T d2bpta1 295 EE 296 (861)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 16
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.16 E-value=0.0059 Score=33.70 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=11.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 2357886899999999998625
Q 000609 270 ELLTDQLDTRLKAVGLVGDLFA 291 (1393)
Q Consensus 270 eL~aed~~~Rl~At~llG~mfs 291 (1393)
.|.++|.+.+..|+..+.++++
T Consensus 21 ~l~s~~~~~~~~a~~~l~~l~s 42 (434)
T d1q1sc_ 21 GINSNNLESQLQATQAARKLLS 42 (434)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHC
T ss_conf 8769899999999999999863
No 17
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=97.07 E-value=0.0072 Score=33.12 Aligned_cols=96 Identities=16% Similarity=0.086 Sum_probs=64.3
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-
Q ss_conf 9999820069991299999999688772199999867899999877079536899999999999643215888988899-
Q 000609 305 FSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVK- 383 (1393)
Q Consensus 305 w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~v~~e~L~- 383 (1393)
...++.-..|.++.||...+...+.+ . ..+.++.|...|.|+|+.||..++.+++.+.. ........+.
T Consensus 21 ~~~L~~~L~d~~~~vR~~A~~~L~~~--~------~~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~--~~~~~~~~~~~ 90 (276)
T d1oyza_ 21 DDELFRLLDDHNSLKRISSARVLQLR--G------GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKI--CKKCEDNVFNI 90 (276)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHH--C------CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCC--CTTTHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHH--C------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCCCCHHHH
T ss_conf 99999884699999999999999861--8------87399999999809998999999999987202--21212022999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999760368926999999999999998
Q 000609 384 LVAERLRDKSVLVKRYTMERLADIFRG 410 (1393)
Q Consensus 384 ~l~eR~rDKK~~VR~eAi~~La~LY~~ 410 (1393)
.+..-+.|..+.||..|+..|++++..
T Consensus 91 l~~~~l~d~~~~vr~~a~~aL~~~~~~ 117 (276)
T d1oyza_ 91 LNNMALNDKSACVRATAIESTAQRCKK 117 (276)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999986699766899999999987024
No 18
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=97.02 E-value=0.0019 Score=37.00 Aligned_cols=85 Identities=16% Similarity=0.112 Sum_probs=60.2
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 21201235788689999999999862589987010039999999820069991299999999688772199999867899
Q 000609 265 PYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQIL 344 (1393)
Q Consensus 265 P~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~~~ei~ 344 (1393)
+.|-.-|..++..+|..|+..+|.+.. +.....++....|.++.||...+.+.+.+ . ..+.+
T Consensus 25 ~~L~~~l~d~~~~vR~~a~~~L~~~~~----------~~~~~~L~~~l~d~~~~VR~~a~~aL~~i--~------~~~~~ 86 (111)
T d1te4a_ 25 EPLLESLSNEDWRIRGAAAWIIGNFQD----------ERAVEPLIKLLEDDSGFVRSGAARSLEQI--G------GERVR 86 (111)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHGGGCS----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHH--C------SHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHCCH----------HHHHHHHHHHHCCCHHHHHHHHHHHHHHH--C------CCCHH
T ss_conf 999999749987899999999876101----------23279987330230337999999999986--7------61149
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99987707953689999999999
Q 000609 345 TALCDRLLDFDENVRKQVVAVIC 367 (1393)
Q Consensus 345 ~~L~~rL~D~DekVR~aaV~ai~ 367 (1393)
+.|...+.|+|..||.+++.++.
T Consensus 87 ~~L~~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 87 AAMEKLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999882998999999999987
No 19
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.99 E-value=0.001 Score=38.78 Aligned_cols=146 Identities=11% Similarity=0.100 Sum_probs=75.7
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CHHHHCHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 1232120123578868999999999986258998---70100399999998200-6999129999999968877219999
Q 000609 262 GVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGS---ANNEQFHSVFSEFLKRL-TDRIVAVRMSVLEHVKSCLLTDPSR 337 (1393)
Q Consensus 262 ~ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~---~~~~~~~~~w~~fL~R~-~D~s~~VR~~~v~~~~~iL~~~p~~ 337 (1393)
++.|.|..-|.+++..+|..|...+|.|...... .+.. ......++... .|.++.||...+.+...+...++..
T Consensus 59 g~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~--~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~ 136 (264)
T d1xqra1 59 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLG--LGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAG 136 (264)
T ss_dssp HHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHH--TTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999837999999999999999999888888899997--2763799999604998999999999999874244026
Q ss_pred C---CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9---86789999987707953689999999999964321588----898889999976036892699999999999999
Q 000609 338 A---DAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNS----IPVETVKLVAERLRDKSVLVKRYTMERLADIFR 409 (1393)
Q Consensus 338 ~---~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~----v~~e~L~~l~eR~rDKK~~VR~eAi~~La~LY~ 409 (1393)
. .....++.|...|...+++|+..++.+++.+....... +....+..+...+.+....||..|...|+.+-.
T Consensus 137 ~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~ 215 (264)
T d1xqra1 137 LLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVT 215 (264)
T ss_dssp HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 7899872012688998805865788999999999874457788888876468999999739998999999999999986
No 20
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.77 E-value=0.013 Score=31.51 Aligned_cols=145 Identities=10% Similarity=0.151 Sum_probs=62.2
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH----H-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 412321201235788689999999999862589987010----0-39999999820069991299999999688772199
Q 000609 261 SGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE----Q-FHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDP 335 (1393)
Q Consensus 261 ~~ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~----~-~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p 335 (1393)
..-+|.+-..+.++|...++.|+..+.++++........ . --+....+|+. +.++.|+...+.....|....+
T Consensus 75 ~~~l~~~~~~~~s~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~--~~~~~iq~~a~~~L~ni~~~~~ 152 (503)
T d1wa5b_ 75 QQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRE--NQPEMLQLEAAWALTNIASGTS 152 (503)
T ss_dssp -CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTST--TSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCC--CCCHHHHHHHHHHHHHHHCCCH
T ss_conf 89999999986499999999999999999740788439999987984999998717--9999999999999999974988
Q ss_pred CCC---CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 999---8678999998770795368999999999996432158----88988899999760368926999999999999
Q 000609 336 SRA---DAPQILTALCDRLLDFDENVRKQVVAVICDVACHALN----SIPVETVKLVAERLRDKSVLVKRYTMERLADI 407 (1393)
Q Consensus 336 ~~~---~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~----~v~~e~L~~l~eR~rDKK~~VR~eAi~~La~L 407 (1393)
... ....+++.+...|.++++.|+..++.+++.++..... .+....+..+...+.+....+++.++..|..+
T Consensus 153 ~~~~~~~~~g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl 231 (503)
T d1wa5b_ 153 AQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNL 231 (503)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 8779999678747899985599715899999999998541189999887413556301204568889999999999998
No 21
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.65 E-value=0.015 Score=30.96 Aligned_cols=55 Identities=9% Similarity=0.042 Sum_probs=24.8
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC--CCHHHHHHHHHHHHHH
Q ss_conf 7707953689999999999964321588898889999976036--8926999999999999
Q 000609 349 DRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRD--KSVLVKRYTMERLADI 407 (1393)
Q Consensus 349 ~rL~D~DekVR~aaV~ai~~la~~~l~~v~~e~L~~l~eR~rD--KK~~VR~eAi~~La~L 407 (1393)
..+.++|..+|.+|-+.+.++....+ .+.+..+.+-+.| ....+|..|...|.+.
T Consensus 7 ~~~~s~d~~~r~~A~~~L~~~~~~~~----~~~~~~l~~il~~~~~~~~~R~~A~i~lk~~ 63 (458)
T d1ibrb_ 7 EKTVSPDRLELEAAQKFLERAAVENL----PTFLVELSRVLANPGNSQVARVAAGLQIKNS 63 (458)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCC----HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 98859499999999999999875283----5899999999844899989999999999988
No 22
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.30 E-value=0.025 Score=29.54 Aligned_cols=96 Identities=13% Similarity=0.052 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHC
Q ss_conf 9912999999996887721999998678999998770795368999999999996432----158889888999997603
Q 000609 315 RIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACH----ALNSIPVETVKLVAERLR 390 (1393)
Q Consensus 315 ~s~~VR~~~v~~~~~iL~~~p~~~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~----~l~~v~~e~L~~l~eR~r 390 (1393)
....+|....++...+....+. .....+.+.+...+.++++++|.+++.+++.+... .+...-..++..+...+.
T Consensus 340 ~~~~~~~~a~~~l~~l~~~~~~-~~~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 418 (876)
T d1qgra_ 340 DDWNPCKAAGVCLMLLATCCED-DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMK 418 (876)
T ss_dssp TCCCHHHHHHHHHHHHHHHHGG-GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 3313999999999999987366-653556789998602513788899999887666432298898999999999998615
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 689269999999999999986
Q 000609 391 DKSVLVKRYTMERLADIFRGC 411 (1393)
Q Consensus 391 DKK~~VR~eAi~~La~LY~~~ 411 (1393)
|.++.||..|+..++++....
T Consensus 419 d~~~~vr~~a~~~l~~~~~~~ 439 (876)
T d1qgra_ 419 DPSVVVRDTAAWTVGRICELL 439 (876)
T ss_dssp CSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHC
T ss_conf 786089999998899999981
No 23
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.83 E-value=0.04 Score=28.12 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=5.5
Q ss_pred HCCCHHHHHHHHHHHHH
Q ss_conf 07953689999999999
Q 000609 351 LLDFDENVRKQVVAVIC 367 (1393)
Q Consensus 351 L~D~DekVR~aaV~ai~ 367 (1393)
+..++..||..++.+++
T Consensus 339 l~~~~~~i~~~~~~~l~ 355 (503)
T d1wa5b_ 339 LSSPKENIKKEACWTIS 355 (503)
T ss_dssp TTCSCHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHH
T ss_conf 63997888999987788
No 24
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.60 E-value=0.15 Score=24.35 Aligned_cols=28 Identities=29% Similarity=0.182 Sum_probs=13.5
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 2321201235788689999999999862
Q 000609 263 VVPYLTGELLTDQLDTRLKAVGLVGDLF 290 (1393)
Q Consensus 263 ViP~Le~eL~aed~~~Rl~At~llG~mf 290 (1393)
.+|-|-.-|.+++..+|..|...++.+-
T Consensus 18 aip~L~~lL~~~~~~v~~~A~~~l~~l~ 45 (529)
T d1jdha_ 18 AIPELTKLLNDEDQVVVNKAAVMVHQLS 45 (529)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999872999999999999999998
No 25
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.94 E-value=0.055 Score=27.24 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHCC----CCCHHHHHHH
Q ss_conf 9991299999999688772199999---8678999998770-795368999999999996432158----8898889999
Q 000609 314 DRIVAVRMSVLEHVKSCLLTDPSRA---DAPQILTALCDRL-LDFDENVRKQVVAVICDVACHALN----SIPVETVKLV 385 (1393)
Q Consensus 314 D~s~~VR~~~v~~~~~iL~~~p~~~---~~~ei~~~L~~rL-~D~DekVR~aaV~ai~~la~~~l~----~v~~e~L~~l 385 (1393)
+.+++||...+.....+..++|... .....++.|...| .|++..||..++.+++.+...... .+....+..+
T Consensus 70 s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L 149 (264)
T d1xqra1 70 AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVL 149 (264)
T ss_dssp CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999988888889999727637999996049989999999999998742440267899872012688
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 976036892699999999999999
Q 000609 386 AERLRDKSVLVKRYTMERLADIFR 409 (1393)
Q Consensus 386 ~eR~rDKK~~VR~eAi~~La~LY~ 409 (1393)
..-+++....|+..|+..|+.+..
T Consensus 150 ~~lL~~~~~~~~~~a~~~L~~l~~ 173 (264)
T d1xqra1 150 MRAMQQQVQKLKVKSAFLLQNLLV 173 (264)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 998805865788999999999874
No 26
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.72 E-value=0.2 Score=23.48 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=59.0
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH-HHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC---C
Q ss_conf 3212012357886899999999998625899870-10039999999820069991299999999688772199999---8
Q 000609 264 VPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN-NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA---D 339 (1393)
Q Consensus 264 iP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~-~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~---~ 339 (1393)
+|.|..-|..++.++|..|...++.+...+.... .-.....+..+..-..+.++.++...+.....+...++... .
T Consensus 190 l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~ 269 (434)
T d1q1sc_ 190 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVI 269 (434)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998524420125677664022012345677776315420100002343065540212213567766667789998
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6789999987707953689999999999964321588----898889999976036892699999999999999
Q 000609 340 APQILTALCDRLLDFDENVRKQVVAVICDVACHALNS----IPVETVKLVAERLRDKSVLVKRYTMERLADIFR 409 (1393)
Q Consensus 340 ~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~----v~~e~L~~l~eR~rDKK~~VR~eAi~~La~LY~ 409 (1393)
...+++.+...|.+++..||..++.+++.++...... +....+..+-..+.+..+.||..|+..++.+-.
T Consensus 270 ~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~ 343 (434)
T d1q1sc_ 270 DAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTS 343 (434)
T ss_dssp HTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred HCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 52564057776136414666888878865200450457777665468999987751586889999999999983
No 27
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=92.13 E-value=0.084 Score=25.99 Aligned_cols=14 Identities=43% Similarity=0.221 Sum_probs=6.8
Q ss_pred HHCCCHHHHHHHHH
Q ss_conf 70795368999999
Q 000609 350 RLLDFDENVRKQVV 363 (1393)
Q Consensus 350 rL~D~DekVR~aaV 363 (1393)
.+.|+|..||.++.
T Consensus 122 Ll~D~d~~VR~~aa 135 (233)
T d1lrva_ 122 MAADRDYLVRAYVV 135 (233)
T ss_dssp GTTCSSHHHHHHHH
T ss_pred HHCCCCHHHHHHHH
T ss_conf 85599878999998
No 28
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.89 E-value=0.25 Score=22.82 Aligned_cols=68 Identities=15% Similarity=0.199 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC----CCCHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHH
Q ss_conf 78999998770795368999999999996432158----8898889999976036-89269999999999999
Q 000609 341 PQILTALCDRLLDFDENVRKQVVAVICDVACHALN----SIPVETVKLVAERLRD-KSVLVKRYTMERLADIF 408 (1393)
Q Consensus 341 ~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~----~v~~e~L~~l~eR~rD-KK~~VR~eAi~~La~LY 408 (1393)
...++.|...|.|.|..||..|+.+++.++..... ......+..+...+++ ....+|..|...|..+.
T Consensus 16 ~~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~ 88 (529)
T d1jdha_ 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 88 (529)
T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 9799999998729999999999999999984557789998713399999999847999999999999999995
No 29
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=90.91 E-value=0.074 Score=26.37 Aligned_cols=13 Identities=38% Similarity=0.483 Sum_probs=5.6
Q ss_pred HHCCCHHHHHHHH
Q ss_conf 7079536899999
Q 000609 350 RLLDFDENVRKQV 362 (1393)
Q Consensus 350 rL~D~DekVR~aa 362 (1393)
.+.|+|..||.++
T Consensus 98 L~~D~d~~VR~~a 110 (233)
T d1lrva_ 98 LMFDEDREVRITV 110 (233)
T ss_dssp TTTCSCHHHHHHH
T ss_pred HHCCCCHHHHHHH
T ss_conf 8449974689988
No 30
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=90.79 E-value=0.32 Score=22.10 Aligned_cols=16 Identities=6% Similarity=0.233 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 6656999999998531
Q 000609 848 AHLRLASAKAVLRLSR 863 (1393)
Q Consensus 848 srLRLaAa~~lLKLA~ 863 (1393)
.++|.+|..++-+++.
T Consensus 224 ~~vR~aAi~Alr~~~~ 239 (336)
T d1lsha1 224 TRVQAEAIMALRNIAK 239 (336)
T ss_dssp HHHHHHHHHTTTTGGG
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 7899999999987655
No 31
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=90.47 E-value=0.34 Score=21.92 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 77665699999999853104888899999998312467735689999999998674
Q 000609 846 DKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVK 901 (1393)
Q Consensus 846 ~ksrLRLaAa~~lLKLA~~~d~~i~~~~~~l~~~~~qD~~~~VR~~Fl~KL~k~L~ 901 (1393)
.-+.+|.+|...+++- .|... .+.++...+..|++.||++-....|...-.
T Consensus 258 e~~EvRiaA~~~lm~t--~P~~~---~l~~i~~~l~~E~~~QV~sfv~S~l~~la~ 308 (336)
T d1lsha1 258 IKSELRIRSCIVFFES--KPSVA---LVSMVAVRLRREPNLQVASFVYSQMRSLSR 308 (336)
T ss_dssp SCHHHHHHHHHHHHHT--CCCHH---HHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHC--CCCHH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 9868999999999853--99999---999999998748279999999999999986
No 32
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.73 E-value=0.53 Score=20.65 Aligned_cols=147 Identities=9% Similarity=0.171 Sum_probs=70.5
Q ss_pred HHHHHCCCCCCCC--HHHHHHHHHHHHHHHCCCCCC-HHHHCHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHCCCC-
Q ss_conf 2321201235788--689999999999862589987-0100399999998200--699912999999996887721999-
Q 000609 263 VVPYLTGELLTDQ--LDTRLKAVGLVGDLFAVPGSA-NNEQFHSVFSEFLKRL--TDRIVAVRMSVLEHVKSCLLTDPS- 336 (1393)
Q Consensus 263 ViP~Le~eL~aed--~~~Rl~At~llG~mfs~~~~~-~~~~~~~~w~~fL~R~--~D~s~~VR~~~v~~~~~iL~~~p~- 336 (1393)
++|.|-.-+.+.+ ..+|..|..+++.++..-... +......++..++.-+ .|.+..||..+++....++...+.
T Consensus 129 li~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~ 208 (876)
T d1qgra_ 129 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKAN 208 (876)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998659999689999999999999987778877888999999999987175745799999999998788873101
Q ss_pred --C-CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCH----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf --9-986789999987707953689999999999964321588898----889999976036892699999999999999
Q 000609 337 --R-ADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPV----ETVKLVAERLRDKSVLVKRYTMERLADIFR 409 (1393)
Q Consensus 337 --~-~~~~ei~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~~v~~----e~L~~l~eR~rDKK~~VR~eAi~~La~LY~ 409 (1393)
. .....+.+.+...+.++|++||..+++.+.++.......+.. .++..+..-..+....++..++..+..+..
T Consensus 209 ~~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (876)
T d1qgra_ 209 FDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCD 288 (876)
T ss_dssp HTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 25778999999999998259988999999999999999969998887887999999987345338999999999999888
No 33
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.52 E-value=5.7 Score=13.75 Aligned_cols=129 Identities=13% Similarity=0.080 Sum_probs=61.4
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHC-CCC---CCCCHHHHHHHHHHH
Q ss_conf 9999999863179994313873899999732021105898203899999887887521-999---999915899999999
Q 000609 30 LKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRIT-APE---APYSDDVLKDIFQLI 105 (1393)
Q Consensus 30 L~~l~~~Ls~~dQ~~~~~~~~sl~~~~~~Lv~~~LL~HkD~~Vr~~vAcCLadIlRI~-APd---APytd~~LkdIF~l~ 105 (1393)
.+++...|.++.+.|. +-...-.++.. ...+..||..++.+|-..++-+ .++ ..+++++-..|-..+
T Consensus 20 ~k~Ae~~L~~~~~~p~------f~~~L~~i~~~---~~~~~~iR~~A~i~lKn~i~~~W~~~~~~~~i~~e~k~~Ik~~l 90 (959)
T d1wa5c_ 20 AKTSERNLRQLETQDG------FGLTLLHVIAS---TNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEI 90 (959)
T ss_dssp HHHHHHHHHHHHTSTT------HHHHHHHHHHC---TTSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCC------HHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999999770998------99999999835---89999999999999999999855643445799999999999999
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 982269988899872469999999974325321016984--18999999999974238981409999999999996023
Q 000609 106 VGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDLEC--DELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEES 182 (1393)
Q Consensus 106 v~ql~~L~d~~~p~f~q~~~lLe~la~vks~vl~~DL~~--~~Li~~lF~~ff~~v~~~~~~~v~~~m~~IL~~iI~Es 182 (1393)
+..|. ++++. +-..++.+=+-+.-.|.|. .+++..+++ ..+.+.+..+.. ...++..++.+.
T Consensus 91 l~~l~---~~~~~-------ir~~l~~~i~~I~~~d~p~~Wp~ll~~l~~----~l~s~~~~~~~~-~L~~l~~i~k~~ 154 (959)
T d1wa5c_ 91 VPLMI---SLPNN-------LQVQIGEAISSIADSDFPDRWPTLLSDLAS----RLSNDDMVTNKG-VLTVAHSIFKRW 154 (959)
T ss_dssp HHHHH---HSCHH-------HHHHHHHHHHHHHHHHSTTTCTTHHHHHHT----TCCSSCTTHHHH-HHHHHHHHHGGG
T ss_pred HHHHH---CCCHH-------HHHHHHHHHHHHHHHHCCCCCHHHHHHHHH----HHCCCCHHHHHH-HHHHHHHHHHHH
T ss_conf 99983---79699-------999999999999987684025799999999----857999999999-999999999998
No 34
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.51 E-value=5.9 Score=13.65 Aligned_cols=101 Identities=16% Similarity=0.252 Sum_probs=67.4
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHCCCC-CCHHHHC---HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-H
Q ss_conf 12012357886899999999998625899-8701003---99999998200699912999999996887721999998-6
Q 000609 266 YLTGELLTDQLDTRLKAVGLVGDLFAVPG-SANNEQF---HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRAD-A 340 (1393)
Q Consensus 266 ~Le~eL~aed~~~Rl~At~llG~mfs~~~-~~~~~~~---~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~-~ 340 (1393)
....-|.+++=-+|..+++++|+++..+. .+++..| +.-...++.=..|++..|+.+.- ++-.+.++||.... +
T Consensus 204 ~~~~LL~s~NYVtrRqSlKLLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~sk~Iq~EAF-hVFKvFVANpnKp~~I 282 (330)
T d1upka_ 204 EYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAF-HVFKVFVANPNKTQPI 282 (330)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHH-HHHHHHHHCSSCCHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHCCCCCCHHH
T ss_conf 999996488427799889999999865567999999967888899999982173133779866-5855301189997799
Q ss_pred --------HHHHHHHHHHHCCC--HHHH---HHHHHHHHH
Q ss_conf --------78999998770795--3689---999999999
Q 000609 341 --------PQILTALCDRLLDF--DENV---RKQVVAVIC 367 (1393)
Q Consensus 341 --------~ei~~~L~~rL~D~--DekV---R~aaV~ai~ 367 (1393)
..++..|.+...|- ||.- |.-+++.|.
T Consensus 283 ~~IL~~Nr~kLl~fl~~f~~d~~~DeqF~~EK~~lI~~I~ 322 (330)
T d1upka_ 283 LDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIR 322 (330)
T ss_dssp HHHHHHTHHHHHHHHHHTTTTC-CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999983999999998678888731407899999999998
No 35
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.31 E-value=8.8 Score=12.48 Aligned_cols=109 Identities=10% Similarity=0.085 Sum_probs=51.6
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 23212012357886899999999998625899870100399999998200699912999999996887721999998678
Q 000609 263 VVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQ 342 (1393)
Q Consensus 263 ViP~Le~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~R~~D~s~~VR~~~v~~~~~iL~~~p~~~~~~e 342 (1393)
.||.|-.-|.+++++++..|...+|.+-.... ..|..+.+. .
T Consensus 3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~-----------------------~~~~~i~~~---------------g 44 (457)
T d1xm9a1 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE-----------------------SAKQQVYQL---------------G 44 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCS-----------------------SHHHHHHHT---------------T
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH-----------------------HHHHHHHHC---------------C
T ss_conf 78999998579999999999999999984999-----------------------999999988---------------8
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC---C-CCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHH
Q ss_conf 999998770795368999999999996432158---8-8988899999760-36892699999999999999
Q 000609 343 ILTALCDRLLDFDENVRKQVVAVICDVACHALN---S-IPVETVKLVAERL-RDKSVLVKRYTMERLADIFR 409 (1393)
Q Consensus 343 i~~~L~~rL~D~DekVR~aaV~ai~~la~~~l~---~-v~~e~L~~l~eR~-rDKK~~VR~eAi~~La~LY~ 409 (1393)
.++.|...|.+++++||..++.+++.++..... . +....+..+...+ .+....||..|...|+.+-.
T Consensus 45 ~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~ 116 (457)
T d1xm9a1 45 GICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 116 (457)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 599999987799989999999999999749988899999879828999998433738899999999999986
No 36
>d1h2vc2 a.118.1.14 (C:291-480) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.58 E-value=13 Score=11.29 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHHCCHHHHHHHHHH----CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHH
Q ss_conf 30388999999841631344123212----0123578868999999999986258998701003999999982
Q 000609 242 HIDYHEVIYDVYRCSPQILSGVVPYL----TGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLK 310 (1393)
Q Consensus 242 ~~~~h~Li~eL~~~~P~lL~~ViP~L----e~eL~aed~~~Rl~At~llG~mfs~~~~~~~~~~~~~w~~fL~ 310 (1393)
..-+|.|+.|+.+..|+.+..|+++- ...|..=|.+.+. -+.+-||.+=|||-=+.+ |++|..
T Consensus 79 ~iyY~sll~elCK~~P~~ip~v~~~ai~~ly~~l~~md~e~~~----Rf~dWfShHLSNF~f~W~--W~eW~~ 145 (190)
T d1h2vc2 79 DVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVD----RFINWFSHHLSNFQFRWS--WEDWSD 145 (190)
T ss_dssp HHHHHHHHHHHHHHSTTTHHHHHHHHHHHHHHTGGGBCHHHHH----HHHHHHHHHHTTTTTCCC--GGGGGG
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHH----HHHHHHHHHHHCCCCCCC--HHHHHH
T ss_conf 3899999999997176778899999999999863117999999----999999999606555114--487788
Done!