Your job contains 1 sequence.
>000610
MGFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDG
YLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVV
CNRCAIQIVHRQVQEHAQNCPGVQPQASQPEGVHDAAAIGTAATGDQSQVATQAGLTASQ
VQTQTIATPPPGKDTNQQPSSMSQPLAVVQAAVPTAEQWYQQQQQYQQYYQQYPGYNPYQ
QHYQQYYPYQQQALPQYQQPQAQSQSQMQPQAQVHPSAQFQSQLQPSHPPVQATVAAQPQ
NQAQVNQQQQSHPLHHGQLLSQAQSYPQAQPQSYPQSQPPQPQPIQPHLQHMQLPQYQQP
QSQILHTPPQIQHPVPQPQPQPQPQSNPQSLQTQVQHQSQPQSHHPPHPSHRPQAQQTAA
SAVTSHHSYSQPQPHQQIPLSGPLQHPMYVHPHTGAQSQMQNQFPQQTPSMRPAQSHATI
SNQPLSTGLPPLGQVANIPPAQQLPVRPHAPQPGVPVSQHPVMQPVQQPMPYQYVQQHLP
FSGQHQQGPFVQPQLRPQRPPQSLQLHPPAYSQPLQNVAVINGMQSHQPRNLGQPLTPNY
GVHAQSYQQSATSLHVRPAQLGANQSSSNQSNLSWTSNQVQLSSEQQAGATSKPEMSEKN
EVAVKIAHEREAESSSEKTAKTDNFDTPGPEAAAVGMKVPKSETDVKAAVDEIKTEVEDK
TNVVDTSSKEFVTDRESHIAENVQPINKMVKEEVIENVEGQKDSANVDIKQEEHSVSKEV
QEEPLLKTSTMQQGTQFGEQSEKVQKEQKVPQAQGAQGPGAVPPAGQAQAGGFVQSPPSL
YGSSTLQQRPAAPSIFQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASFGRGP
GHNGPHQHSFESPLVAPQGPYNLGHPHPSPVGGPPQRSVPLSGFDSHVGTMVGPAYGPGG
PMDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQRSPLGPPSGTRSNMMRMNGGPG
SELRDERFKSFPDGRLNPFPVDPARSVIDRGEFEEDLKQFSRPSHLDAEPVPKLGSHFLP
SRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFLPAYHDDAAGRSDSSHA
HPDFPRPGRAYGRRHMGGLSPRSPFREFCGFGGLPGSLGGSRSVREDIGGREFRRFGDPI
GNSFHDSRFPVLPSHLRRGEFEGPGRTGDLIGQEFLPSHLRRGEPLGPHNLRLGETVGLG
GFPGPARMEELGGPGNFPPPRLGEPGFRSSFSRQGFPNDGGFYTGDMESIDNSRKRKPPS
MGWCRICKVDCETVDGLDLHSQTREHQKMAMDMVLSIKQNAKKQKLTSGDRCSSDDANKS
RNVNFDGRGKKH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000610
(1392 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028847 - symbol:CG9014 species:7227 "Drosophila m... 164 2.6e-09 2
UNIPROTKB|C9JJ10 - symbol:TRAF4 "TNF receptor-associated ... 146 6.5e-09 1
ZFIN|ZDB-GENE-040308-1 - symbol:traf4a "tnf receptor-asso... 167 9.2e-09 1
UNIPROTKB|F8VSP7 - symbol:RNF41 "E3 ubiquitin-protein lig... 142 1.7e-08 1
MGI|MGI:1914754 - symbol:Rnf151 "ring finger protein 151"... 149 1.2e-07 1
UNIPROTKB|F8VSB6 - symbol:RNF41 "E3 ubiquitin-protein lig... 142 1.4e-07 1
UNIPROTKB|F1Q031 - symbol:RNF151 "Uncharacterized protein... 148 1.7e-07 1
ZFIN|ZDB-GENE-040305-2 - symbol:traf4b "tnf receptor-asso... 152 4.1e-07 1
UNIPROTKB|B1AMX7 - symbol:TRAF2 "TNF receptor-associated ... 129 4.3e-07 1
UNIPROTKB|Q5FWL3 - symbol:rnf41 "E3 ubiquitin-protein lig... 148 4.6e-07 1
RGD|1309302 - symbol:Rnf151 "ring finger protein 151" spe... 143 6.0e-07 1
UNIPROTKB|E2QYH9 - symbol:TRAF4 "Uncharacterized protein"... 150 6.2e-07 1
WB|WBGene00006612 - symbol:trf-1 species:6239 "Caenorhabd... 152 6.7e-07 2
UNIPROTKB|F6SA91 - symbol:TRAF4 "TNF receptor-associated ... 149 7.4e-07 1
UNIPROTKB|F6RJL7 - symbol:TRAF4 "Uncharacterized protein"... 149 8.4e-07 1
UNIPROTKB|Q9BUZ4 - symbol:TRAF4 "TNF receptor-associated ... 149 8.4e-07 1
UNIPROTKB|Q2KHN1 - symbol:RNF151 "RING finger protein 151... 138 1.1e-06 2
ZFIN|ZDB-GENE-030131-5735 - symbol:traf6 "TNF receptor-as... 149 1.1e-06 1
MGI|MGI:1202880 - symbol:Traf4 "TNF receptor associated f... 148 1.1e-06 1
RGD|1306708 - symbol:Traf4 "Tnf receptor associated facto... 148 1.1e-06 1
UNIPROTKB|I3L5Q2 - symbol:RNF151 "Uncharacterized protein... 140 1.2e-06 1
UNIPROTKB|Q2TBT8 - symbol:RNF151 "RING finger protein 151... 139 1.9e-06 1
UNIPROTKB|E2QVC5 - symbol:RNF41 "Uncharacterized protein"... 142 2.2e-06 1
UNIPROTKB|Q9H4P4 - symbol:RNF41 "E3 ubiquitin-protein lig... 142 2.2e-06 1
UNIPROTKB|Q5R7T5 - symbol:RNF41 "E3 ubiquitin-protein lig... 142 2.2e-06 1
MGI|MGI:1914838 - symbol:Rnf41 "ring finger protein 41" s... 142 2.2e-06 1
UNIPROTKB|G3V930 - symbol:Rnf41 "Protein Rnf41" species:1... 142 2.2e-06 1
UNIPROTKB|F1N658 - symbol:RNF41 "Uncharacterized protein"... 141 2.8e-06 1
UNIPROTKB|I3LFT6 - symbol:LOC100157936 "Uncharacterized p... 141 2.8e-06 1
ZFIN|ZDB-GENE-040426-2920 - symbol:rnf41 "ring finger pro... 139 4.7e-06 1
UNIPROTKB|B1AMX8 - symbol:TRAF2 "TNF receptor-associated ... 129 7.7e-06 1
UNIPROTKB|H9L161 - symbol:RNF41 "Uncharacterized protein"... 123 1.1e-05 1
UNIPROTKB|B1AMY1 - symbol:TRAF2 "TNF receptor-associated ... 115 1.3e-05 1
UNIPROTKB|J9P9L4 - symbol:COL4A5 "Collagen alpha-5(IV) ch... 144 1.6e-05 1
UNIPROTKB|Q28247 - symbol:COL4A5 "Collagen alpha-5(IV) ch... 144 1.6e-05 1
UNIPROTKB|F1PH05 - symbol:COL4A5 "Collagen alpha-5(IV) ch... 144 1.6e-05 1
MGI|MGI:101835 - symbol:Traf2 "TNF receptor-associated fa... 144 2.1e-05 2
UNIPROTKB|J9JIG0 - symbol:TRAF4 "TNF receptor-associated ... 113 2.2e-05 1
UNIPROTKB|E1BX70 - symbol:RNF151 "Uncharacterized protein... 129 2.9e-05 1
UNIPROTKB|F1RVZ4 - symbol:TRAF2 "Uncharacterized protein"... 135 3.4e-05 1
RGD|1306853 - symbol:Traf6 "TNF receptor-associated facto... 144 5.0e-05 2
ZFIN|ZDB-GENE-071120-4 - symbol:traf1 "TNF receptor-assoc... 128 5.3e-05 2
WB|WBGene00006565 - symbol:tfg-1 species:6239 "Caenorhabd... 91 5.4e-05 3
UNIPROTKB|Q3MV19 - symbol:traf6-a "TNF receptor-associate... 133 6.0e-05 1
UNIPROTKB|Q28DL4 - symbol:traf6 "TNF receptor-associated ... 133 6.0e-05 1
UNIPROTKB|F1N474 - symbol:COL4A5 "Uncharacterized protein... 102 6.5e-05 2
MGI|MGI:108072 - symbol:Traf6 "TNF receptor-associated fa... 132 7.1e-05 1
UNIPROTKB|F6XG92 - symbol:TRAF2 "Uncharacterized protein"... 130 0.00011 1
UNIPROTKB|F1PY23 - symbol:TRAF2 "Uncharacterized protein"... 130 0.00011 1
UNIPROTKB|E2R6C7 - symbol:TRAF2 "Uncharacterized protein"... 130 0.00011 1
UNIPROTKB|F1Q0F7 - symbol:COL4A5 "Collagen alpha-5(IV) ch... 136 0.00011 1
UNIPROTKB|J9NS71 - symbol:TRAF2 "Uncharacterized protein"... 130 0.00012 1
DICTYBASE|DDB_G0270014 - symbol:DDB_G0270014 species:4468... 121 0.00012 1
UNIPROTKB|Q01955 - symbol:COL4A3 "Collagen alpha-3(IV) ch... 113 0.00015 2
UNIPROTKB|P29400 - symbol:COL4A5 "Collagen alpha-5(IV) ch... 103 0.00016 3
UNIPROTKB|Q6DJN2 - symbol:traf6-b "TNF receptor-associate... 129 0.00016 1
UNIPROTKB|J9P756 - symbol:COL4A3 "Uncharacterized protein... 110 0.00022 3
UNIPROTKB|F1PM98 - symbol:COL4A3 "Uncharacterized protein... 110 0.00023 3
MGI|MGI:88467 - symbol:Col1a1 "collagen, type I, alpha 1"... 111 0.00030 2
UNIPROTKB|K7GN38 - symbol:TRAF5 "Uncharacterized protein"... 119 0.00035 1
UNIPROTKB|E1BTY1 - symbol:TRAF2 "Uncharacterized protein"... 129 0.00038 2
UNIPROTKB|F1Q133 - symbol:COL4A1 "Uncharacterized protein... 106 0.00038 2
UNIPROTKB|Q12933 - symbol:TRAF2 "TNF receptor-associated ... 129 0.00041 2
ZFIN|ZDB-GENE-030131-9441 - symbol:rnf41l "ring finger pr... 116 0.00045 3
UNIPROTKB|F1SLZ9 - symbol:F1SLZ9 "Uncharacterized protein... 120 0.00048 1
UNIPROTKB|F1NIW0 - symbol:F1NIW0 "Uncharacterized protein... 84 0.00054 2
UNIPROTKB|F1MJ71 - symbol:COL4A4 "Collagen alpha-4(IV) ch... 94 0.00055 2
MGI|MGI:1932491 - symbol:Prp2 "proline rich protein 2" sp... 102 0.00057 2
UNIPROTKB|G5EH07 - symbol:MGCH7_ch7g400 "Uncharacterized ... 125 0.00063 2
UNIPROTKB|A7XUJ6 - symbol:TRAF6 "TNF receptor-associated ... 123 0.00069 1
RGD|1310457 - symbol:Traf2 "Tnf receptor-associated facto... 122 0.00080 1
UNIPROTKB|F1NDF5 - symbol:COL4A5 "Uncharacterized protein... 94 0.00095 3
RGD|628797 - symbol:Prpmp5 "proline-rich protein MP5" spe... 121 0.00099 3
>FB|FBgn0028847 [details] [associations]
symbol:CG9014 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014134 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 Gene3D:3.90.890.10
HSSP:P15919 GeneTree:ENSGT00530000063647 KO:K11981 EMBL:BT003232
RefSeq:NP_609668.2 UniGene:Dm.12062 SMR:Q9VJW5 IntAct:Q9VJW5
MINT:MINT-313528 STRING:Q9VJW5 EnsemblMetazoa:FBtr0080579
GeneID:34777 KEGG:dme:Dmel_CG9014 UCSC:CG9014-RA
FlyBase:FBgn0028847 eggNOG:NOG250957 InParanoid:Q9VJW5 OMA:HVDEELI
OrthoDB:EOG49CNQ9 GenomeRNAi:34777 NextBio:790166 Uniprot:Q9VJW5
Length = 328
Score = 164 (62.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 41/145 (28%), Positives = 70/145 (48%)
Query: 1 MGFDNECILNIQSLAGEYFCPVCRLLVYPNEALQS-QCTHLYCKPCLTYIVNTTQACPYD 59
MGFD CI+ + E CP+C ++ E +QS +C H +C+ C+ + Q CP D
Sbjct: 1 MGFDLNCIVG--HVDEELICPICTDVL--EEPVQSSECEHAFCRACIDKWMIQKQICPVD 56
Query: 60 --GYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNS 117
G L + LV ++ + + ++ + C F +SGC L E +H + C
Sbjct: 57 RSGLLTSH-----LVPVSRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAACEHNPK 111
Query: 118 PVV-CNR-CAIQIVHRQVQEHAQNC 140
VV C++ C +++ ++ H NC
Sbjct: 112 VVVECSKGCGMKVPKDEMSRH--NC 134
Score = 49 (22.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 696 GMKVPKSETDVKAAVDEIKTEVEDKTNVV-DTSSKEFVTDRES 737
GMKVPK E V E++ VE V D K+ + +S
Sbjct: 121 GMKVPKDEMSRHNCVFELRELVEKLAKEVSDLKQKQSDMEEQS 163
Score = 41 (19.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 578 VAVINGMQSHQPRNLGQPL 596
V V+ G +H P NL +P+
Sbjct: 290 VVVLGGENTHMPENL-RPI 307
>UNIPROTKB|C9JJ10 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR027138 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC010761
HGNC:HGNC:12034 ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46
IPI:IPI00791505 ProteinModelPortal:C9JJ10 SMR:C9JJ10 STRING:C9JJ10
Ensembl:ENST00000422344 HOGENOM:HOG000128105 ArrayExpress:C9JJ10
Bgee:C9JJ10 Uniprot:C9JJ10
Length = 182
Score = 146 (56.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSK---PLVES 74
CP+C + E +Q S C H +C CL ++ CP D + A P +
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKFPHPYPQIYP 75
Query: 75 NKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQV 133
+ L + + + C+ GC W GPL H + C+F P C NRC +++ R +
Sbjct: 76 DPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIP--CPNRCPMKLSRRDL 133
Query: 134 QEHAQN-CP 141
H Q+ CP
Sbjct: 134 PAHLQHDCP 142
>ZFIN|ZDB-GENE-040308-1 [details] [associations]
symbol:traf4a "tnf receptor-associated factor 4a"
species:7955 "Danio rerio" [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040308-1 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 HSSP:Q12933 GeneTree:ENSGT00550000074359
HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848 OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:CR855391 EMBL:CR848661 EMBL:BC065969
EMBL:AJ556548 IPI:IPI00486500 RefSeq:NP_991325.1 UniGene:Dr.81750
SMR:Q7T1K2 Ensembl:ENSDART00000016024 GeneID:404045 KEGG:dre:404045
CTD:404045 InParanoid:Q7T1K2 OMA:TECPKRT NextBio:20817516
Uniprot:Q7T1K2
Length = 470
Score = 167 (63.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCSKAM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPE---- 71
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
L + I + + C+ GC W G + + SH S CAF P C NRC++++ R + EH
Sbjct: 72 LEQQILALPIRCIHSEEGCRWTGQMKQLQSHFSTCAFNVIP--CPNRCSVKLTRRDLPEH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>UNIPROTKB|F8VSP7 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0045637 "regulation of myeloid cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC073896 HGNC:HGNC:18401
IPI:IPI01021772 ProteinModelPortal:F8VSP7 SMR:F8VSP7
Ensembl:ENST00000549038 ArrayExpress:F8VSP7 Bgee:F8VSP7
Uniprot:F8VSP7
Length = 190
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>MGI|MGI:1914754 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 MGI:MGI:1914754 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q9H0F5 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:146310 eggNOG:NOG319521 GeneTree:ENSGT00530000063647
HOGENOM:HOG000154154 HOVERGEN:HBG087956 OMA:PCCRKEV
OrthoDB:EOG4V6ZHF EMBL:AK005854 EMBL:BC049562 IPI:IPI00131917
RefSeq:NP_080481.1 UniGene:Mm.46159 ProteinModelPortal:Q9CQ29
SMR:Q9CQ29 STRING:Q9CQ29 PhosphoSite:Q9CQ29 PRIDE:Q9CQ29
Ensembl:ENSMUST00000008626 GeneID:67504 KEGG:mmu:67504
UCSC:uc008axw.1 InParanoid:Q9CQ29 NextBio:324764 Bgee:Q9CQ29
CleanEx:MM_RNF151 Genevestigator:Q9CQ29
GermOnline:ENSMUSG00000008482 Uniprot:Q9CQ29
Length = 239
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 17 EYFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESN 75
++ C VC +L P C+H++CK C+ + CP VT + +VE N
Sbjct: 17 KFLCSVCHGVLKRPTRL---PCSHIFCKKCIFRWLARQNTCPCCRKEVTR---RKMVEVN 70
Query: 76 KALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQVQE 135
K L +TIG++ V C +GC PL+ H C F C +Q++ + E
Sbjct: 71 K-LRKTIGRLQVKCKNAAAGCLDTHPLAHRKEHQDSCPFELMACPNEGCTVQVLRGVLDE 129
Query: 136 HAQNC 140
H Q+C
Sbjct: 130 HRQHC 134
>UNIPROTKB|F8VSB6 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0045637 "regulation of myeloid cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC073896 HGNC:HGNC:18401
IPI:IPI01020852 ProteinModelPortal:F8VSB6 SMR:F8VSB6
Ensembl:ENST00000552244 ArrayExpress:F8VSB6 Bgee:F8VSB6
Uniprot:F8VSB6
Length = 201
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>UNIPROTKB|F1Q031 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 OMA:PCCRKEV EMBL:AAEX03004635
Ensembl:ENSCAFT00000030950 Uniprot:F1Q031
Length = 244
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 18 YFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKA 77
+ C VC ++ ++ C+H++CK C+ + + CP E K +V NK
Sbjct: 18 FLCSVCHGVL--KRPVRLPCSHIFCKKCILRWLARQKTCPC---CRKEVKRKKMVHVNK- 71
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQVQEHA 137
L TIG++ V C +GC+ PL+ H C F C ++ + EH
Sbjct: 72 LRRTIGRLEVKCKNAEAGCSVTCPLAHRRGHQDSCPFELMACPHEGCTARVPRGALAEHR 131
Query: 138 QNCP-GVQ 144
Q+CP G Q
Sbjct: 132 QHCPHGAQ 139
>ZFIN|ZDB-GENE-040305-2 [details] [associations]
symbol:traf4b "tnf receptor-associated factor 4b"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-040305-2 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 eggNOG:NOG321306 HSSP:Q12933
GeneTree:ENSGT00550000074359 HOGENOM:HOG000004841
HOVERGEN:HBG103438 OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46
EMBL:CU463284 EMBL:BC078361 EMBL:AJ556549 IPI:IPI00487539
RefSeq:NP_997982.1 UniGene:Dr.15893 SMR:Q7T1K1
Ensembl:ENSDART00000056878 GeneID:404035 KEGG:dre:404035 CTD:404035
InParanoid:Q7T1K1 OMA:LASHNEA NextBio:20817511 Uniprot:Q7T1K1
Length = 478
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 17 EYFCPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVES 74
+++CP+C + E +Q S C H +C CL Y+ CP D + A P +E
Sbjct: 15 KFYCPLCEKPM--REPVQVSTCGHRFCDTCLQEYLSEGVFTCPEDQLPLDYAKIFPDLE- 71
Query: 75 NKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQV 133
L + I + + C+ GC W +H S C F + V C NRC+++++ R++
Sbjct: 72 ---LEQQILSLPIRCIHSEEGCRWTAQNKLLQAHLSVCEF--NVVSCPNRCSVKLLRREL 126
Query: 134 QEHAQN 139
EH Q+
Sbjct: 127 PEHLQH 132
>UNIPROTKB|B1AMX7 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005938 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL355987 GO:GO:0033209
GO:GO:0046328 GO:GO:0009898 InterPro:IPR017907 GO:GO:0043623
GO:GO:0035631 GO:GO:0051023 GO:GO:0034351 EMBL:AL449425
IPI:IPI00970988 UniGene:Hs.522506 HGNC:HGNC:12032
PANTHER:PTHR10131:SF21 SMR:B1AMX7 Ensembl:ENST00000419057
HOGENOM:HOG000171265 Uniprot:B1AMX7
Length = 172
Score = 129 (50.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF ++ +L + L +Y C CR ++ Q+QC H YC CL I+++ AC
Sbjct: 18 GF-SKTLLGTK-LEAKYLCSACRNVL--RRPFQAQCGHRYCSFCLASILSSGPQNCAACV 73
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAF 114
++G + E S ++ES+ A + + V L GCTW+G L E S C
Sbjct: 74 HEG-IYEEGIS--ILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYES----CHE 126
Query: 115 GNSPVVCNRC-AIQIVHR--QVQEHAQN-CP 141
G P++ C A + + R + + H ++ CP
Sbjct: 127 GRCPLMLTECPACKGLVRLGEKERHLEHECP 157
>UNIPROTKB|Q5FWL3 [details] [associations]
symbol:rnf41 "E3 ubiquitin-protein ligase NRDP1"
species:8355 "Xenopus laevis" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=ISS] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:10193 HOVERGEN:HBG053154
KO:K11981 EMBL:BC089294 EMBL:BC108758 RefSeq:NP_001089261.1
UniGene:Xl.71609 ProteinModelPortal:Q5FWL3 SMR:Q5FWL3 GeneID:734308
KEGG:xla:734308 Xenbase:XB-GENE-943151 Uniprot:Q5FWL3
Length = 317
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 42/144 (29%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VSRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GCT L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQITCDNAVFGCTTIVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ +V H NC
Sbjct: 113 PVTCEQGCGLEMPKDEVPNH--NC 134
>RGD|1309302 [details] [associations]
symbol:Rnf151 "ring finger protein 151" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 RGD:1309302 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
GeneTree:ENSGT00530000063647 OrthoDB:EOG4V6ZHF IPI:IPI00368706
RefSeq:NP_001100457.1 UniGene:Rn.89276 Ensembl:ENSRNOT00000018964
GeneID:302977 KEGG:rno:302977 UCSC:RGD:1309302 NextBio:650458
Uniprot:D3ZJQ8
Length = 238
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 18 YFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKA 77
+ C VC ++ ++ C+H++CK C+ + CP E + +V+ NK
Sbjct: 18 FLCSVCHGVL--KRPMRLPCSHIFCKKCIFQWLARQNTCPC---CRKEVKRRKMVQVNK- 71
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQVQEHA 137
L +TIG++ V C +GC PL+ H C F C Q++ + EH
Sbjct: 72 LRKTIGRLQVKCKNAAAGCLVTCPLAHRKGHQDSCPFELMACPNEGCTAQVLRGVLDEHR 131
Query: 138 QNC 140
Q+C
Sbjct: 132 QHC 134
>UNIPROTKB|E2QYH9 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:EAFESHE PANTHER:PTHR10131:SF46
EMBL:AAEX03006670 EMBL:AAEX03006669 Ensembl:ENSCAFT00000029849
Uniprot:E2QYH9
Length = 458
Score = 150 (57.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 39/126 (30%), Positives = 56/126 (44%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPE---- 71
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
L + + + C+ GC W GPL SH + C+F P C NRC ++ R + H
Sbjct: 72 LEVQVLSLAIRCIHSEEGCRWSGPLRHLQSHLNTCSFNVIP--CPNRCPTKLSRRDLPAH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>WB|WBGene00006612 [details] [associations]
symbol:trf-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SUPFAM:SSF49599
EMBL:Z93382 Gene3D:3.90.890.10 HSSP:Q12933
GeneTree:ENSGT00550000074359 KO:K09848 EMBL:AF348168 PIR:T22238
RefSeq:NP_499773.2 UniGene:Cel.9956 ProteinModelPortal:G5EG80
SMR:G5EG80 EnsemblMetazoa:F45G2.6 GeneID:176767
KEGG:cel:CELE_F45G2.6 CTD:176767 WormBase:F45G2.6 OMA:RTNEAKS
NextBio:893922 Uniprot:G5EG80
Length = 462
Score = 152 (58.6 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 34/127 (26%), Positives = 54/127 (42%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVE 73
L + CP+C + + ++ C H YC+ C N T C ++ L +
Sbjct: 12 LPADCTCPICEQAL--RDPIKLNCDHHYCRQCFEN-ENRTPGCAACQTII----QPELCQ 64
Query: 74 SNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQV 133
++A + I + V C F SGC W G L H S C F +S + C +C Q +
Sbjct: 65 HDRAKQKQILALPVVCTFESSGCPWDGQLGTLHDHLSECTFKSS-LKCEKCGRQFAKNDL 123
Query: 134 QEHAQNC 140
++H C
Sbjct: 124 EKHRAKC 130
Score = 45 (20.9 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 1083 PFDRGPHGYGMDMGPRPFER-GLSYDPGLKLDPMGASAPSRFL--PAYHDDAAGRSDS 1137
PF R +D PRP +R ++Y +DP A +FL P +AA S S
Sbjct: 336 PFHRAIKISLLDQNPRPEDRVNITY----VIDPRKLKANEKFLARPRGERNAAFGSQS 389
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1099 PFERGLSYDPGLKLDPMGASAPS-----RFLPAYHDDAAGRSDSSHAH 1141
PF+ GL+ P L+++ S P+ F+P Y AG +S H
Sbjct: 164 PFQCGLTDRPRLEIEAHCPSCPNVDNVCPFVP-YGCTFAGGKESIQQH 210
>UNIPROTKB|F6SA91 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50145
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 EMBL:AC010761 HGNC:HGNC:12034 HOVERGEN:HBG103438
ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46 IPI:IPI00791505
ProteinModelPortal:F6SA91 Ensembl:ENST00000444415 Uniprot:F6SA91
Length = 437
Score = 149 (57.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELE-- 73
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
+ +G + + C+ GC W GPL H + C+F P C NRC +++ R + H
Sbjct: 74 -VQVLG-LPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIP--CPNRCPMKLSRRDLPAH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>UNIPROTKB|F6RJL7 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA] [GO:0050699 "WW domain
binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030323 "respiratory tube development"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007585 "respiratory gaseous exchange" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0046330
GO:GO:0045860 GO:GO:0007585 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073
Gene3D:3.90.890.10 GO:GO:0030323 GeneTree:ENSGT00550000074359
OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:DAAA02048606
IPI:IPI00686516 UniGene:Bt.8676 ProteinModelPortal:F6RJL7
Ensembl:ENSBTAT00000056164 Uniprot:F6RJL7
Length = 470
Score = 149 (57.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELE-- 73
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
+ +G +++ C+ GC W GPL H + C+F P C NRC ++ R + H
Sbjct: 74 -VQVLG-LSIRCIHSEEGCRWNGPLRHLQGHLNTCSFNVVP--CPNRCPAKLSRRDLPAH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>UNIPROTKB|Q9BUZ4 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030323 "respiratory tube development" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IDA] [GO:0050699 "WW domain binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0006915 GO:GO:0007165 GO:GO:0042981
GO:GO:0005856 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 EMBL:AC010761 EMBL:X80200
EMBL:AF082185 EMBL:AY937224 EMBL:DQ323999 EMBL:BC001769
IPI:IPI00017037 IPI:IPI00162088 PIR:I38026 RefSeq:NP_004286.2
UniGene:Hs.8375 PDB:2EOD PDB:2YUC PDBsum:2EOD PDBsum:2YUC
ProteinModelPortal:Q9BUZ4 SMR:Q9BUZ4 IntAct:Q9BUZ4 MINT:MINT-107471
STRING:Q9BUZ4 PhosphoSite:Q9BUZ4 DMDM:30580636 PaxDb:Q9BUZ4
PeptideAtlas:Q9BUZ4 PRIDE:Q9BUZ4 DNASU:9618 Ensembl:ENST00000262395
Ensembl:ENST00000262396 GeneID:9618 KEGG:hsa:9618 UCSC:uc002hcq.1
UCSC:uc002hcs.3 CTD:9618 GeneCards:GC17P027071 HGNC:HGNC:12034
HPA:CAB009055 MIM:602464 neXtProt:NX_Q9BUZ4 PharmGKB:PA36711
HOGENOM:HOG000004841 HOVERGEN:HBG103438 InParanoid:Q9BUZ4 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 ChiTaRS:TRAF4
EvolutionaryTrace:Q9BUZ4 GenomeRNAi:9618 NextBio:36083
ArrayExpress:Q9BUZ4 Bgee:Q9BUZ4 CleanEx:HS_TRAF4
Genevestigator:Q9BUZ4 GermOnline:ENSG00000076604
PANTHER:PTHR10131:SF46 Uniprot:Q9BUZ4
Length = 470
Score = 149 (57.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELE-- 73
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
+ +G + + C+ GC W GPL H + C+F P C NRC +++ R + H
Sbjct: 74 -VQVLG-LPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIP--CPNRCPMKLSRRDLPAH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>UNIPROTKB|Q2KHN1 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013010
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS51081 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:146310
eggNOG:NOG319521 HOGENOM:HOG000154154 HOVERGEN:HBG087956
OrthoDB:EOG4V6ZHF EMBL:BC029501 EMBL:BC113014 IPI:IPI00399168
RefSeq:NP_777563.2 UniGene:Hs.99354 ProteinModelPortal:Q2KHN1
SMR:Q2KHN1 PhosphoSite:Q2KHN1 DMDM:119371030 PRIDE:Q2KHN1
Ensembl:ENST00000321392 Ensembl:ENST00000569714 GeneID:146310
KEGG:hsa:146310 UCSC:uc002cnt.1 GeneCards:GC16P002054
HGNC:HGNC:23235 neXtProt:NX_Q2KHN1 PharmGKB:PA134992556
InParanoid:Q2KHN1 GenomeRNAi:146310 NextBio:85326 Bgee:Q2KHN1
CleanEx:HS_RNF151 Genevestigator:Q2KHN1 GermOnline:ENSG00000179580
Uniprot:Q2KHN1
Length = 245
Score = 138 (53.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 18 YFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKA 77
+ C VC ++ + C+H++CK C+ + + CP E K +V NK
Sbjct: 18 FVCSVCHGVL--KRPARLPCSHIFCKKCILRWLARQKTCPC---CRKEVKRKKVVHMNK- 71
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQVQEHA 137
L +TIG++ V C +GC PL+ H C F + C Q+ + EH
Sbjct: 72 LRKTIGRLEVKCKNADAGCIVTCPLAHRKGHQDSCPFELTACPNEGCTSQVPRGTLAEHR 131
Query: 138 QNC 140
Q+C
Sbjct: 132 QHC 134
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/92 (31%), Positives = 35/92 (38%)
Query: 995 GSQQRSPLG------PPSGTRSNMMRMNGGPGSELRDERFKSFPDGRLNPFP-VDPARSV 1047
GSQQR PLG P R N R S +R ER + L +D A SV
Sbjct: 137 GSQQRCPLGCGATLDPAERARHNCYRELHNAWS-VRQERRRPLLLSLLRRVRWLDQATSV 195
Query: 1048 IDR-----GEF-EEDLKQFSRPSHLDAEPVPK 1073
+ R F EED +AE P+
Sbjct: 196 VRRELAELSNFLEEDTALLEGAPQEEAEAAPE 227
>ZFIN|ZDB-GENE-030131-5735 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISS] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009617 "response to bacterium" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0045087 "innate immune response" evidence=IMP]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-030131-5735
GO:GO:0005737 GO:GO:0007165 GO:GO:0045893 GO:GO:0009617
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0009615 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OrthoDB:EOG4320XV
PANTHER:PTHR10131:SF48 EMBL:AY616583 EMBL:AL929208 EMBL:BC055214
EMBL:BC171483 EMBL:BC171487 IPI:IPI00610824 RefSeq:NP_001038217.1
UniGene:Dr.74618 ProteinModelPortal:Q6IWL4 SMR:Q6IWL4 STRING:Q6IWL4
Ensembl:ENSDART00000038273 GeneID:554561 KEGG:dre:554561
InParanoid:Q7SXX1 OMA:NECGAVM NextBio:20880774 Bgee:Q6IWL4
Uniprot:Q6IWL4
Length = 542
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/129 (30%), Positives = 61/129 (47%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTT-QACPYDGYLVTEADSKPLV 72
L +Y CP+C L+ A+Q+ C H +C C+ + T Q CP D ++ E + L
Sbjct: 65 LESKYECPIC--LMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVDNEVLLE---EQLF 119
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + +TV C GC+ + L + H S C F +P C +C +
Sbjct: 120 PDNFAKREILS-LTVKC--SNFGCSEKMELRQLEKHLSQCRFATAP--CPQCQESVPISH 174
Query: 133 VQEH-AQNC 140
+ EH +Q+C
Sbjct: 175 LDEHKSQHC 183
>MGI|MGI:1202880 [details] [associations]
symbol:Traf4 "TNF receptor associated factor 4"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030323
"respiratory tube development" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0031996 "thioesterase
binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0046330 "positive regulation of
JNK cascade" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050699 "WW domain binding" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 MGI:MGI:1202880
Pfam:PF00097 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0006915 GO:GO:0007165
GO:GO:0042981 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH466596
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 EMBL:AL591070 GO:GO:0030323
GeneTree:ENSGT00550000074359 CTD:9618 HOGENOM:HOG000004841
HOVERGEN:HBG103438 KO:K09848 OMA:EAFESHE OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:X92346 EMBL:AF233449 EMBL:AK035056
EMBL:AK040877 EMBL:AK053900 IPI:IPI00264492 RefSeq:NP_033449.2
UniGene:Mm.390418 ProteinModelPortal:Q61382 SMR:Q61382
STRING:Q61382 PhosphoSite:Q61382 PRIDE:Q61382 DNASU:22032
Ensembl:ENSMUST00000017530 GeneID:22032 KEGG:mmu:22032
InParanoid:Q8BHD9 NextBio:301790 Bgee:Q61382 CleanEx:MM_TRAF4
Genevestigator:Q61382 GermOnline:ENSMUSG00000017386 Uniprot:Q61382
Length = 470
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/126 (30%), Positives = 56/126 (44%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELE-- 73
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
+ +G + + C+ GC W GPL H + C+F P C NRC ++ R + H
Sbjct: 74 -VQVLG-LAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVP--CPNRCPAKLSRRDLPAH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>RGD|1306708 [details] [associations]
symbol:Traf4 "Tnf receptor associated factor 4" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0030323 "respiratory tube development"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031996 "thioesterase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050699 "WW domain binding"
evidence=IEA;ISO] [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA;ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 RGD:1306708 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0046330 GO:GO:0045860 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 GeneTree:ENSGT00550000074359
CTD:9618 HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46 EMBL:BC162047
IPI:IPI00869573 RefSeq:NP_001100487.1 UniGene:Rn.3219 SMR:B1WC90
STRING:B1WC90 Ensembl:ENSRNOT00000018468 GeneID:303285
KEGG:rno:303285 NextBio:651050 Genevestigator:B1WC90 Uniprot:B1WC90
Length = 470
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/126 (30%), Positives = 56/126 (44%)
Query: 20 CPVCRLLVYPNEALQ-SQCTHLYCKPCLT-YIVNTTQACPYDGYLVTEADSKPLVESNKA 77
CP+C + E +Q S C H +C CL ++ CP D + A P E
Sbjct: 18 CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELE-- 73
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NRCAIQIVHRQVQEH 136
+ +G + + C+ GC W GPL H + C+F P C NRC ++ R + H
Sbjct: 74 -VQVLG-LAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVP--CPNRCPAKLSRRDLPAH 129
Query: 137 AQN-CP 141
Q+ CP
Sbjct: 130 LQHDCP 135
>UNIPROTKB|I3L5Q2 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 OMA:PCCRKEV Ensembl:ENSSSCT00000022774
Uniprot:I3L5Q2
Length = 232
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 18 YFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKA 77
+ C VC ++ + ++ C+H++CK C+ + + + CP E K +V NK
Sbjct: 14 FLCSVCHGVL--KKPVRLPCSHIFCKKCILHWLARQKTCPC---CRKEVKRKKMVHVNK- 67
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQVQEHA 137
L +TIG++ V C GC PL+ H C F + C ++ + EH
Sbjct: 68 LRKTIGRLEVKCKNAEVGCLVTCPLAHRKGHQDSCPFELTACPNEGCMSRVPRGALAEHR 127
Query: 138 QNC 140
Q+C
Sbjct: 128 QHC 130
>UNIPROTKB|Q2TBT8 [details] [associations]
symbol:RNF151 "RING finger protein 151" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:BC109671
IPI:IPI00695483 RefSeq:NP_001070506.1 UniGene:Bt.54154
ProteinModelPortal:Q2TBT8 PRIDE:Q2TBT8 Ensembl:ENSBTAT00000047302
GeneID:767973 KEGG:bta:767973 CTD:146310 eggNOG:NOG319521
GeneTree:ENSGT00530000063647 HOGENOM:HOG000154154
HOVERGEN:HBG087956 InParanoid:Q2TBT8 OMA:PCCRKEV OrthoDB:EOG4V6ZHF
NextBio:20918328 Uniprot:Q2TBT8
Length = 240
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 18 YFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKA 77
+ C VC ++ ++ C+H++CK C+ + + CP E + +V NK
Sbjct: 18 FLCSVCHGVL--KRPVRLPCSHIFCKKCILRWLARQKTCPC---CRKEVRHRKMVHVNK- 71
Query: 78 LAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVC-NR-CAIQIVHRQVQE 135
L + IG++ V C +GC PL+ H C F +VC N C +++ + E
Sbjct: 72 LQKIIGRLEVKCRNAEAGCQVTCPLAHRKGHQDSCPF--ELMVCPNEGCMLRVPRGALDE 129
Query: 136 HAQNC 140
H QNC
Sbjct: 130 HRQNC 134
>UNIPROTKB|E2QVC5 [details] [associations]
symbol:RNF41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051896 "regulation of
protein kinase B signaling cascade" evidence=IEA] [GO:0045637
"regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045619 "regulation of lymphocyte differentiation"
evidence=IEA] [GO:0043408 "regulation of MAPK cascade"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0005135 "interleukin-3 receptor binding"
evidence=IEA] [GO:0005128 "erythropoietin receptor binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 Prosite:PS00518 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907
GO:GO:0031386 SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896
Gene3D:3.90.890.10 GO:GO:0043408 GeneTree:ENSGT00530000063647
CTD:10193 KO:K11981 OMA:CHERRWP EMBL:AAEX03006921 EMBL:AAEX03006922
RefSeq:XP_848722.1 RefSeq:XP_856953.1 SMR:E2QVC5
Ensembl:ENSCAFT00000000183 GeneID:607044 KEGG:cfa:607044
NextBio:20892797 Uniprot:E2QVC5
Length = 317
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>UNIPROTKB|Q9H4P4 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005128 "erythropoietin
receptor binding" evidence=IEA] [GO:0005135 "interleukin-3 receptor
binding" evidence=IEA] [GO:0045619 "regulation of lymphocyte
differentiation" evidence=IEA] [GO:0045637 "regulation of myeloid
cell differentiation" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0006917 "induction of
apoptosis" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IDA] [GO:0030336 "negative
regulation of cell migration" evidence=IMP] [GO:0043408 "regulation
of MAPK cascade" evidence=IDA] [GO:0051896 "regulation of protein
kinase B signaling cascade" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0008285 GO:GO:0006917 GO:GO:0046872 GO:GO:0008270
EMBL:CH471054 GO:GO:0030336 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896 Gene3D:3.90.890.10
GO:GO:0043408 CTD:10193 eggNOG:NOG254243 HOGENOM:HOG000006561
HOVERGEN:HBG053154 KO:K11981 OrthoDB:EOG44TP85 EMBL:AF077599
EMBL:AK314811 EMBL:AC073896 EMBL:BC024284 EMBL:BC032637
EMBL:AY007109 IPI:IPI00024801 IPI:IPI00375624 RefSeq:NP_001229755.1
RefSeq:NP_005776.1 RefSeq:NP_919339.1 RefSeq:NP_919340.1
UniGene:Hs.524502 PDB:2FZP PDB:2GWF PDBsum:2FZP PDBsum:2GWF
ProteinModelPortal:Q9H4P4 SMR:Q9H4P4 IntAct:Q9H4P4 STRING:Q9H4P4
PhosphoSite:Q9H4P4 DMDM:88909120 PaxDb:Q9H4P4 PRIDE:Q9H4P4
DNASU:10193 Ensembl:ENST00000345093 Ensembl:ENST00000394013
Ensembl:ENST00000552656 GeneID:10193 KEGG:hsa:10193 UCSC:uc001ske.2
GeneCards:GC12M056598 HGNC:HGNC:18401 HPA:HPA016812
neXtProt:NX_Q9H4P4 PharmGKB:PA134875033 InParanoid:Q9H4P4
OMA:CHERRWP PhylomeDB:Q9H4P4 EvolutionaryTrace:Q9H4P4
GenomeRNAi:10193 NextBio:38572 ArrayExpress:Q9H4P4 Bgee:Q9H4P4
CleanEx:HS_RNF41 Genevestigator:Q9H4P4 GermOnline:ENSG00000181852
Uniprot:Q9H4P4
Length = 317
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>UNIPROTKB|Q5R7T5 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9601 "Pongo abelii" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=ISS] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0006915 GO:GO:0008285
GO:GO:0006917 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 GO:GO:2000377
GO:GO:0051896 Gene3D:3.90.890.10 GO:GO:0043408
GeneTree:ENSGT00530000063647 CTD:10193 HOVERGEN:HBG053154 KO:K11981
OMA:CHERRWP EMBL:CR860024 RefSeq:NP_001126274.1 UniGene:Pab.5407
HSSP:Q9H4P4 ProteinModelPortal:Q5R7T5 SMR:Q5R7T5 PRIDE:Q5R7T5
Ensembl:ENSPPYT00000005505 GeneID:100173246 KEGG:pon:100173246
InParanoid:Q5R7T5 Uniprot:Q5R7T5
Length = 317
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>MGI|MGI:1914838 [details] [associations]
symbol:Rnf41 "ring finger protein 41" species:10090 "Mus
musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005128 "erythropoietin receptor binding"
evidence=IDA] [GO:0005135 "interleukin-3 receptor binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0031386 "protein tag" evidence=IEA] [GO:0043408 "regulation of
MAPK cascade" evidence=ISO] [GO:0045619 "regulation of lymphocyte
differentiation" evidence=IDA] [GO:0045637 "regulation of myeloid
cell differentiation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=ISO] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=ISO] InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1914838 Prosite:PS00518
GO:GO:0006915 GO:GO:0008285 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030336 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896 Gene3D:3.90.890.10
GO:GO:0005128 GO:GO:0043408 GO:GO:0005135 GO:GO:0045619
GO:GO:0045637 GeneTree:ENSGT00530000063647 CTD:10193
eggNOG:NOG254243 HOGENOM:HOG000006561 HOVERGEN:HBG053154 KO:K11981
OrthoDB:EOG44TP85 OMA:CHERRWP EMBL:AK015745 EMBL:AK020527
EMBL:AK028551 EMBL:AK030558 EMBL:AK031657 EMBL:AK032848
EMBL:AK034551 EMBL:AK044103 EMBL:AK077466 EMBL:BC019415
EMBL:BC049078 IPI:IPI00308182 IPI:IPI00720089 RefSeq:NP_001157709.1
RefSeq:NP_080535.2 UniGene:Mm.294120 PDB:2OGB PDBsum:2OGB
ProteinModelPortal:Q8BH75 SMR:Q8BH75 MINT:MINT-7148521
STRING:Q8BH75 PhosphoSite:Q8BH75 PRIDE:Q8BH75 DNASU:67588
Ensembl:ENSMUST00000096386 Ensembl:ENSMUST00000171342 GeneID:67588
KEGG:mmu:67588 UCSC:uc007hmr.2 UCSC:uc007hms.2 InParanoid:Q8BH75
EvolutionaryTrace:Q8BH75 NextBio:324987 Bgee:Q8BH75
CleanEx:MM_RNF41 Genevestigator:Q8BH75
GermOnline:ENSMUSG00000025373 Uniprot:Q8BH75
Length = 317
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>UNIPROTKB|G3V930 [details] [associations]
symbol:Rnf41 "Protein Rnf41" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005128 "erythropoietin receptor binding" evidence=IEA]
[GO:0005135 "interleukin-3 receptor binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0030336 "negative
regulation of cell migration" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0043408 "regulation of MAPK cascade"
evidence=IEA] [GO:0045619 "regulation of lymphocyte
differentiation" evidence=IEA] [GO:0045637 "regulation of myeloid
cell differentiation" evidence=IEA] [GO:0051896 "regulation of
protein kinase B signaling cascade" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 EMBL:CH474104
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 OMA:CHERRWP
ProteinModelPortal:G3V930 Ensembl:ENSRNOT00000029778 Uniprot:G3V930
Length = 317
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAVVRLDSLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>UNIPROTKB|F1N658 [details] [associations]
symbol:RNF41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051896 "regulation of protein
kinase B signaling cascade" evidence=IEA] [GO:0045637 "regulation
of myeloid cell differentiation" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0043408 "regulation of MAPK cascade" evidence=IEA] [GO:0030336
"negative regulation of cell migration" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0008285 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030336 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896 Gene3D:3.90.890.10
GO:GO:0043408 GeneTree:ENSGT00530000063647 OMA:CHERRWP
EMBL:DAAA02013531 EMBL:DAAA02013532 EMBL:DAAA02013533
IPI:IPI00717146 Ensembl:ENSBTAT00000038204 Uniprot:F1N658
Length = 317
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>UNIPROTKB|I3LFT6 [details] [associations]
symbol:LOC100157936 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031386 "protein tag" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 KO:K11981
OMA:CHERRWP EMBL:CU694915 RefSeq:XP_001927720.2
RefSeq:XP_003481664.1 ProteinModelPortal:I3LFT6 SMR:I3LFT6
Ensembl:ENSSSCT00000031416 GeneID:100157936 KEGG:ssc:100157936
Uniprot:I3LFT6
Length = 317
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 40/144 (27%), Positives = 63/144 (43%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P +A C H +C C+T + Q CP
Sbjct: 1 MGYD---VTRFQGDVDEDLICPICSGVLEEPVQA--PHCEHAFCNACITQWFSQQQTCPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GC+ L SH S C
Sbjct: 56 DRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C + C +++ ++ H NC
Sbjct: 113 PVTCEQGCGLEMPKDELPNH--NC 134
>ZFIN|ZDB-GENE-040426-2920 [details] [associations]
symbol:rnf41 "ring finger protein 41" species:7955
"Danio rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0031386 "protein tag" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISS] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0006917 "induction of apoptosis" evidence=ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-2920
GO:GO:0006917 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 GO:GO:0030318
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 Gene3D:3.90.890.10
EMBL:BC045329 IPI:IPI00491768 RefSeq:NP_998681.1 UniGene:Dr.78078
ProteinModelPortal:Q7ZW16 SMR:Q7ZW16 STRING:Q7ZW16 GeneID:406837
KEGG:dre:406837 CTD:10193 eggNOG:NOG254243 HOGENOM:HOG000006561
HOVERGEN:HBG053154 InParanoid:Q7ZW16 KO:K11981 OrthoDB:EOG44TP85
NextBio:20818342 ArrayExpress:Q7ZW16 Uniprot:Q7ZW16
Length = 318
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 40/144 (27%), Positives = 60/144 (41%)
Query: 1 MGFDNECILNIQSLAGE-YFCPVCR-LLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPY 58
MG+D + Q E CP+C +L P A C H +C C+T Q CP
Sbjct: 1 MGYD---VTRFQGEVDEDLLCPICSGVLEEPVRA--PHCEHAFCNACITQWFAQQQICPV 55
Query: 59 DGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG-NS 117
D +VT A +P+ + + + K+ + C GCT L + SH C
Sbjct: 56 DRTVVTLAHLRPVP---RIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKR 112
Query: 118 PVVCNR-CAIQIVHRQVQEHAQNC 140
PV C C +++ ++ H NC
Sbjct: 113 PVTCEEGCGLEMPKDEMPNH--NC 134
>UNIPROTKB|B1AMX8 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005938 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL355987 GO:GO:0033209
GO:GO:0046328 GO:GO:0009898 InterPro:IPR017907 GO:GO:0043623
GO:GO:0035631 GO:GO:0051023 GO:GO:0034351 EMBL:AL449425
UniGene:Hs.522506 HGNC:HGNC:12032 PANTHER:PTHR10131:SF21
HOGENOM:HOG000171265 IPI:IPI00647767 SMR:B1AMX8
Ensembl:ENST00000429509 Uniprot:B1AMX8
Length = 193
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF ++ +L + L +Y C CR ++ Q+QC H YC CL I+++ AC
Sbjct: 18 GF-SKTLLGTK-LEAKYLCSACRNVL--RRPFQAQCGHRYCSFCLASILSSGPQNCAACV 73
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAF 114
++G + E S ++ES+ A + + V L GCTW+G L E S C
Sbjct: 74 HEG-IYEEGIS--ILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYES----CHE 126
Query: 115 GNSPVVCNRC-AIQIVHR--QVQEHAQN-CP 141
G P++ C A + + R + + H ++ CP
Sbjct: 127 GRCPLMLTECPACKGLVRLGEKERHLEHECP 157
>UNIPROTKB|H9L161 [details] [associations]
symbol:RNF41 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031386 "protein tag" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0005128 "erythropoietin
receptor binding" evidence=IEA] [GO:0005135 "interleukin-3 receptor
binding" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0030336 "negative regulation of
cell migration" evidence=IEA] [GO:0043408 "regulation of MAPK
cascade" evidence=IEA] [GO:0045619 "regulation of lymphocyte
differentiation" evidence=IEA] [GO:0045637 "regulation of myeloid
cell differentiation" evidence=IEA] [GO:0051896 "regulation of
protein kinase B signaling cascade" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51081
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647
EMBL:AADN02056886 Ensembl:ENSGALT00000029722 OMA:IFNAIFP
Uniprot:H9L161
Length = 173
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 33 LQS-QCTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKALAETIGKITVHCLF 91
LQ+ C H +C C+T + Q CP D +VT A +P+ + + + K+ + C
Sbjct: 1 LQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVP---RIMRNMLSKLQITCDN 57
Query: 92 HRSGCTWQGPLSECTSHCSGCAFG-NSPVVCNR-CAIQIVHRQVQEHAQNC 140
GCT L SH + C PV C + C +++ ++ H NC
Sbjct: 58 AVFGCTAVVRLDNLMSHLNDCEHNPKRPVTCEQGCGLEMPKDELPNH--NC 106
>UNIPROTKB|B1AMY1 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005938 GO:GO:0046872 GO:GO:0008270 GO:GO:0045121
GO:GO:0030163 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL355987 GO:GO:0033209 GO:GO:0046328 GO:GO:0009898
InterPro:IPR017907 GO:GO:0043623 GO:GO:0035631 GO:GO:0051023
GO:GO:0034351 HOGENOM:HOG000231558 EMBL:AL449425 UniGene:Hs.522506
HGNC:HGNC:12032 PANTHER:PTHR10131:SF21 OrthoDB:EOG4R502J
IPI:IPI00644377 SMR:B1AMY1 Ensembl:ENST00000414589 Uniprot:B1AMY1
Length = 121
Score = 115 (45.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF ++ +L + L +Y C CR ++ Q+QC H YC CL I+++ AC
Sbjct: 18 GF-SKTLLGTK-LEAKYLCSACRNVL--RRPFQAQCGHRYCSFCLASILSSGPQNCAACV 73
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSE 104
++G + E S ++ES+ A + + V L GCTW+G L E
Sbjct: 74 HEG-IYEEGIS--ILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 120
>UNIPROTKB|J9P9L4 [details] [associations]
symbol:COL4A5 "Collagen alpha-5(IV) chain" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:AAEX03026757 EMBL:AAEX03026761
EMBL:AAEX03026758 EMBL:AAEX03026759 EMBL:AAEX03026760
Ensembl:ENSCAFT00000047231 Uniprot:J9P9L4
Length = 1691
Score = 144 (55.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 133/514 (25%), Positives = 177/514 (34%)
Query: 838 PSLYGSSTLQQRPAAPSI-FQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASF 896
P G L+ P P I PG++ + P P + P PPG + GPA
Sbjct: 134 PGSPGFPGLEGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY-PG-PPG---IQGPAGPT 188
Query: 897 GRGPGHNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
G PG GP L+ P GP L P G G + GP
Sbjct: 189 GL-PGPIGPPG---PPGLMGPPGPPGLPGPKGNMGLNFQG---P-KGEKGEQG-LQGP-- 237
Query: 957 GPGGPMDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQ-RSPLGPPSGTRSNMMRM 1015
PG P + + P++ E G + G D PG R P GPP G +
Sbjct: 238 -PGPPGQISEQKRPIDVEFQKGDQ-----GLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQ 291
Query: 1016 N-----GGPGSELRDERFKSFPDGRLNP-FPVDPARSVIDRGEFEEDLKQFSRPSHLDAE 1069
G PG + + + P +P +P +P R ++G+ + D+ P +
Sbjct: 292 GEPGKRGKPGKDGENGQ-PGIPGLPGDPGYPGEPGRDG-EKGQ-KGDIGSTGPPGLVIPR 348
Query: 1070 P-----VPKLGSHFLPSRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFL 1124
P V + G+ LP P ++G G+ GP P GL PG + MG P F
Sbjct: 349 PGTGVTVGEKGNMGLPGLPGEKGERGFPGIQGP-P---GLPGPPGTAV--MGPPGPPGF- 401
Query: 1125 PAYHDDAAGRSDSSHAHPDFP----RPGRAYGRRHMGGLSPR-SPFREFCXX-------X 1172
P + P FP +PG R G P SP E C
Sbjct: 402 PGERGQKGDEGPPGISIPGFPGLDGQPGAPGLRGPPGPPGPHISPSDEICETGPPGPPGS 461
Query: 1173 XXXXXXXXXRSVREDIGGREFRRFGDPIGNSFHDSRFPVLPSHLRRGEFEGPGRTGDLIG 1232
+ V+ D G F G + P LP G PG+ G+ G
Sbjct: 462 PGDRGLQGEQGVKGDKGDTCFNCIGTGVSGPRGQPGLPGLPGP--PGSLGFPGQKGEK-G 518
Query: 1233 QEFL--PSHLRR--GEPLGPHNL--RLGETVGLGGFPG-PARMEELGGPGNFPPPRLGEP 1285
L P L G P GP GE + FPG ELG PG P G P
Sbjct: 519 HAGLTGPKGLTGIPGAP-GPPGFPGSKGEPGDVLTFPGMKGDKGELGYPG---AP--GLP 572
Query: 1286 GFRSSFSRQGFPNDGGFYTGDMESIDNSRKRKPP 1319
G + + G P G G+ I +R PP
Sbjct: 573 GLPGTPGQDGLPGLPG-PKGEPGGIAFKGERGPP 605
>UNIPROTKB|Q28247 [details] [associations]
symbol:COL4A5 "Collagen alpha-5(IV) chain" species:9615
"Canis lupus familiaris" [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] InterPro:IPR001442
Pfam:PF01413 PROSITE:PS51403 SMART:SM00111 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007155 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005604 GO:GO:0005201
HOVERGEN:HBG004933 HOGENOM:HOG000085652 OrthoDB:EOG45DWPF
Gene3D:2.170.240.10 KO:K06237 EMBL:AF470624 EMBL:U07888 PIR:A55267
RefSeq:NP_001002979.1 UniGene:Cfa.177 ProteinModelPortal:Q28247
SMR:Q28247 GeneID:403466 KEGG:cfa:403466 CTD:1287 InParanoid:Q28247
NextBio:20816982 Uniprot:Q28247
Length = 1691
Score = 144 (55.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 133/514 (25%), Positives = 177/514 (34%)
Query: 838 PSLYGSSTLQQRPAAPSI-FQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASF 896
P G L+ P P I PG++ + P P + P PPG + GPA
Sbjct: 134 PGSPGFPGLEGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY-PG-PPG---IQGPAGPT 188
Query: 897 GRGPGHNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
G PG GP L+ P GP L P G G + GP
Sbjct: 189 GL-PGPIGPPG---PPGLMGPPGPPGLPGPKGNMGLNFQG---P-KGEKGEQG-LQGP-- 237
Query: 957 GPGGPMDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQ-RSPLGPPSGTRSNMMRM 1015
PG P + + P++ E G + G D PG R P GPP G +
Sbjct: 238 -PGPPGQISEQKRPIDVEFQKGDQ-----GLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQ 291
Query: 1016 N-----GGPGSELRDERFKSFPDGRLNP-FPVDPARSVIDRGEFEEDLKQFSRPSHLDAE 1069
G PG + + + P +P +P +P R ++G+ + D+ P +
Sbjct: 292 GEPGKRGKPGKDGENGQ-PGIPGLPGDPGYPGEPGRDG-EKGQ-KGDIGSTGPPGLVIPR 348
Query: 1070 P-----VPKLGSHFLPSRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFL 1124
P V + G+ LP P ++G G+ GP P GL PG + MG P F
Sbjct: 349 PGTGVTVGEKGNMGLPGLPGEKGERGFPGIQGP-P---GLPGPPGTAV--MGPPGPPGF- 401
Query: 1125 PAYHDDAAGRSDSSHAHPDFP----RPGRAYGRRHMGGLSPR-SPFREFCXX-------X 1172
P + P FP +PG R G P SP E C
Sbjct: 402 PGERGQKGDEGPPGISIPGFPGLDGQPGAPGLRGPPGPPGPHISPSDEICETGPPGPPGS 461
Query: 1173 XXXXXXXXXRSVREDIGGREFRRFGDPIGNSFHDSRFPVLPSHLRRGEFEGPGRTGDLIG 1232
+ V+ D G F G + P LP G PG+ G+ G
Sbjct: 462 PGDRGLQGEQGVKGDKGDTCFNCIGTGVSGPRGQPGLPGLPGP--PGSLGFPGQKGEK-G 518
Query: 1233 QEFL--PSHLRR--GEPLGPHNL--RLGETVGLGGFPG-PARMEELGGPGNFPPPRLGEP 1285
L P L G P GP GE + FPG ELG PG P G P
Sbjct: 519 HAGLTGPKGLTGIPGAP-GPPGFPGSKGEPGDVLTFPGMKGDKGELGYPG---AP--GLP 572
Query: 1286 GFRSSFSRQGFPNDGGFYTGDMESIDNSRKRKPP 1319
G + + G P G G+ I +R PP
Sbjct: 573 GLPGTPGQDGLPGLPG-PKGEPGGIAFKGERGPP 605
>UNIPROTKB|F1PH05 [details] [associations]
symbol:COL4A5 "Collagen alpha-5(IV) chain" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:AAEX03026757 EMBL:AAEX03026761
OMA:MPMNMEP EMBL:AAEX03026758 EMBL:AAEX03026759 EMBL:AAEX03026760
Ensembl:ENSCAFT00000028631 Uniprot:F1PH05
Length = 1693
Score = 144 (55.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 133/514 (25%), Positives = 177/514 (34%)
Query: 838 PSLYGSSTLQQRPAAPSI-FQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASF 896
P G L+ P P I PG++ + P P + P PPG + GPA
Sbjct: 134 PGSPGFPGLEGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY-PG-PPG---IQGPAGPT 188
Query: 897 GRGPGHNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
G PG GP L+ P GP L P G G + GP
Sbjct: 189 GL-PGPIGPPG---PPGLMGPPGPPGLPGPKGNMGLNFQG---P-KGEKGEQG-LQGP-- 237
Query: 957 GPGGPMDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQ-RSPLGPPSGTRSNMMRM 1015
PG P + + P++ E G + G D PG R P GPP G +
Sbjct: 238 -PGPPGQISEQKRPIDVEFQKGDQ-----GLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQ 291
Query: 1016 N-----GGPGSELRDERFKSFPDGRLNP-FPVDPARSVIDRGEFEEDLKQFSRPSHLDAE 1069
G PG + + + P +P +P +P R ++G+ + D+ P +
Sbjct: 292 GEPGKRGKPGKDGENGQ-PGIPGLPGDPGYPGEPGRDG-EKGQ-KGDIGSTGPPGLVIPR 348
Query: 1070 P-----VPKLGSHFLPSRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFL 1124
P V + G+ LP P ++G G+ GP P GL PG + MG P F
Sbjct: 349 PGTGVTVGEKGNMGLPGLPGEKGERGFPGIQGP-P---GLPGPPGTAV--MGPPGPPGF- 401
Query: 1125 PAYHDDAAGRSDSSHAHPDFP----RPGRAYGRRHMGGLSPR-SPFREFCXX-------X 1172
P + P FP +PG R G P SP E C
Sbjct: 402 PGERGQKGDEGPPGISIPGFPGLDGQPGAPGLRGPPGPPGPHISPSDEICETGPPGPPGS 461
Query: 1173 XXXXXXXXXRSVREDIGGREFRRFGDPIGNSFHDSRFPVLPSHLRRGEFEGPGRTGDLIG 1232
+ V+ D G F G + P LP G PG+ G+ G
Sbjct: 462 PGDRGLQGEQGVKGDKGDTCFNCIGTGVSGPRGQPGLPGLPGP--PGSLGFPGQKGEK-G 518
Query: 1233 QEFL--PSHLRR--GEPLGPHNL--RLGETVGLGGFPG-PARMEELGGPGNFPPPRLGEP 1285
L P L G P GP GE + FPG ELG PG P G P
Sbjct: 519 HAGLTGPKGLTGIPGAP-GPPGFPGSKGEPGDVLTFPGMKGDKGELGYPG---AP--GLP 572
Query: 1286 GFRSSFSRQGFPNDGGFYTGDMESIDNSRKRKPP 1319
G + + G P G G+ I +R PP
Sbjct: 573 GLPGTPGQDGLPGLPG-PKGEPGGIAFKGERGPP 605
>MGI|MGI:101835 [details] [associations]
symbol:Traf2 "TNF receptor-associated factor 2" species:10090
"Mus musculus" [GO:0002726 "positive regulation of T cell cytokine
production" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=ISO] [GO:0005174 "CD40 receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005938 "cell cortex" evidence=ISO] [GO:0006461
"protein complex assembly" evidence=ISO] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0031435 "mitogen-activated protein kinase kinase kinase
binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0031996 "thioesterase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=ISO] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=ISO] [GO:0034351 "negative regulation of glial
cell apoptotic process" evidence=ISO] [GO:0035631 "CD40 receptor
complex" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=NAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=ISO] [GO:0043623 "cellular protein complex assembly"
evidence=IDA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0046625 "sphingolipid
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051023 "regulation of immunoglobulin secretion"
evidence=IMP] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070207 "protein homotrimerization" evidence=ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] [GO:2001238 "positive regulation of
extrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027133 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:101835 Pfam:PF00097 Prosite:PS00518
GO:GO:0005938 GO:GO:0006915 GO:GO:0043066 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL732590 GO:GO:0070207
GO:GO:0033209 GO:GO:0004842 GO:GO:0007250 GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:0051865 GO:GO:2001238
GO:GO:0043623 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743
GO:GO:0051023 GO:GO:0090073 GO:GO:0043507 GO:GO:0034351
GO:GO:0046625 GO:GO:0002726 eggNOG:NOG264247 HOGENOM:HOG000231558
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 CTD:7186 KO:K03173
OMA:PSDGCTW PANTHER:PTHR10131:SF21 EMBL:L35303 EMBL:AF027570
EMBL:AF233332 EMBL:AF233326 EMBL:AF233327 EMBL:AF233328
EMBL:AF233329 EMBL:AF233330 EMBL:AF233331 EMBL:BC003801
IPI:IPI00135901 IPI:IPI00271450 PIR:I61512 RefSeq:NP_033448.2
UniGene:Mm.3399 ProteinModelPortal:P39429 SMR:P39429 DIP:DIP-468N
IntAct:P39429 MINT:MINT-197749 STRING:P39429 PhosphoSite:P39429
PaxDb:P39429 PRIDE:P39429 Ensembl:ENSMUST00000028311
Ensembl:ENSMUST00000114234 GeneID:22030 KEGG:mmu:22030
UCSC:uc008isl.1 InParanoid:A2AJA3 OrthoDB:EOG4R502J NextBio:301780
Bgee:P39429 CleanEx:MM_TRAF2 Genevestigator:P39429
GermOnline:ENSMUSG00000026942 Uniprot:P39429
Length = 501
Score = 144 (55.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 48/151 (31%), Positives = 71/151 (47%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF ++ +L + L +Y C C+ ++ Q+QC H YC CLT I+++ AC
Sbjct: 18 GF-SKTLLGTR-LEAKYLCSACKNIL--RRPFQAQCGHRYCSFCLTSILSSGPQNCAACV 73
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAF 114
Y+G L E S ++ES+ A + + V L GCTW+G L E S C
Sbjct: 74 YEG-LYEEGIS--ILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYES----CHE 126
Query: 115 GNSPVVCNRC-AIQ-IVHRQVQEH--AQNCP 141
G P + C A + +V +EH Q CP
Sbjct: 127 GLCPFLLTECPACKGLVRLSEKEHHTEQECP 157
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1324 CRICKVDCETVDGLDLH 1340
C+ C+ C VD L++H
Sbjct: 163 CQHCRAPCSHVD-LEVH 178
>UNIPROTKB|J9JIG0 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR027138 PROSITE:PS50145 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
EMBL:AC010761 HGNC:HGNC:12034 ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46
Ensembl:ENST00000454852 Uniprot:J9JIG0
Length = 112
Score = 113 (44.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/88 (30%), Positives = 40/88 (45%)
Query: 56 CPYDGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFG 115
CP D + A P E + +G + + C+ GC W GPL H + C+F
Sbjct: 6 CPEDQLPLDYAKIYPDPELE---VQVLG-LPIRCIHSEEGCRWSGPLRHLQGHLNTCSFN 61
Query: 116 NSPVVC-NRCAIQIVHRQVQEHAQN-CP 141
P C NRC +++ R + H Q+ CP
Sbjct: 62 VIP--CPNRCPMKLSRRDLPAHLQHDCP 87
>UNIPROTKB|E1BX70 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 EMBL:AADN02024876
IPI:IPI00601918 Ensembl:ENSGALT00000025714 OMA:HERECEY
Uniprot:E1BX70
Length = 244
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 1 MGFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLT-YIVNTTQACPYD 59
MG+D E + + G C +CR ++ + LQ+ C H +C C+ ++V+ + CP D
Sbjct: 1 MGYDIERFVGYVN-EG-LLCSICRDVL--EDPLQAPCEHAFCTACIHGWLVHHSN-CPED 55
Query: 60 GYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPV 119
++ + +PL K + ++ +HC GC L H C + P
Sbjct: 56 RQVIDVSVLRPLYRYMK---NDLNRLQLHCKNREYGCEMVCSLESIDRHERECEYSQIPC 112
Query: 120 VCNRCAIQIVHRQVQEHAQNC 140
C +QI R + H C
Sbjct: 113 SNAGCTVQIERRNLDGHLAVC 133
>UNIPROTKB|F1RVZ4 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001238 "positive regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090073 "positive regulation
of protein homodimerization activity" evidence=IEA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA] [GO:0070207
"protein homotrimerization" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA] [GO:0046625 "sphingolipid binding"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005174 "CD40 receptor
binding" evidence=IEA] [GO:0005164 "tumor necrosis factor receptor
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0004842 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:2001238 GO:GO:0043623 SUPFAM:SSF49599
GO:GO:0035631 GO:GO:0032743 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0046625 GO:GO:0002726
GeneTree:ENSGT00550000074359 OMA:PSDGCTW PANTHER:PTHR10131:SF21
EMBL:FP236151 ProteinModelPortal:F1RVZ4 Ensembl:ENSSSCT00000006417
Uniprot:F1RVZ4
Length = 533
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/151 (30%), Positives = 72/151 (47%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF ++ +L + L +Y C CR ++ Q+QC H YC CL+ I+++ AC
Sbjct: 31 GF-SKTLLGTK-LEDKYLCSACRNVL--RRPFQAQCGHRYCSYCLSNILSSGPQNCAACV 86
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAF 114
++G + E S ++ES+ A + + V L GCTW+G L E S C
Sbjct: 87 HEG-IYEEGVS--ILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYES----CHE 139
Query: 115 GNSPVVCNRC-AIQIVHR--QVQEH-AQNCP 141
G+ P V C A + + R + + H Q CP
Sbjct: 140 GHCPFVLTECPACKGLVRLGEKERHLGQECP 170
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 144 (55.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTT-QACPYDGYLVTEADSKPLV 72
L +Y CP+C + + EA+Q+ C H +CK C+T + CP D ++ E L
Sbjct: 64 LESKYECPICLMAL--REAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLE---NQLF 118
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + +TV C GC + L H C F + V+C +C Q
Sbjct: 119 PDNFAKREILS-LTVKC--PNKGCVQKMELRHLEDHQVHCEF--ALVICPQCQRFFQKCQ 173
Query: 133 VQEHA-QNCP 141
+ +H ++CP
Sbjct: 174 INKHIIEDCP 183
Score = 37 (18.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1106 YDPGLKLDPMGASAPSR 1122
++ L L P AS+PSR
Sbjct: 278 HNVNLSLRPCDASSPSR 294
>ZFIN|ZDB-GENE-071120-4 [details] [associations]
symbol:traf1 "TNF receptor-associated factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027136 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-071120-4 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:7185 eggNOG:NOG264247 HOGENOM:HOG000231558 HOVERGEN:HBG058222
KO:K03172 OrthoDB:EOG42Z4Q6 PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 EMBL:CR376844 IPI:IPI00866427
RefSeq:NP_001121853.1 UniGene:Dr.134981 Ensembl:ENSDART00000101174
GeneID:100148503 KEGG:dre:100148503 OMA:DHLENGC NextBio:20792131
Uniprot:B0UXK1
Length = 551
Score = 128 (50.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 17 EYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQ-----ACPYDGYLVTEADSKPL 71
+Y C C ++ N+A Q+ C H YC C+ ++V + C + V E+D+ L
Sbjct: 39 KYLCSNCNNVL--NKARQTVCGHRYCLACVNWLVRNNKDLVCTKCKGEDSNV-ESDTSVL 95
Query: 72 VES----NKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCN-RCAI 126
+ + A+ + I + VHC GC W+ L H S C + P CN C I
Sbjct: 96 TPNQFFNDVAINKEILDLKVHCA--NQGCPWRSTLKNFEDHQSQCEYALIP--CNIGCGI 151
Query: 127 QIVHRQVQEHAQN-CP 141
+ + + H ++ CP
Sbjct: 152 MVQRKTLATHLESGCP 167
Score = 54 (24.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 23/129 (17%), Positives = 56/129 (43%)
Query: 681 KTDNFDTPGPEAAAVGMKVPKSETDVKAAVDEIKTEVEDKTNVVDTSSKEFVTDRESHIA 740
+TD D PG A + + E +D ++ +V+ N++ ++E + S +A
Sbjct: 294 ETDGGD-PGVSDKAFSLHDDQVELAAGQQLDALQQKVQVIENIISALNREVEKTQISVVA 352
Query: 741 ENVQPINKMVKEEVIENVEGQKDSANVDIKQEEHSVSKEVQEEPLLKTSTMQQGTQFGEQ 800
N N +++I+++E + +++ +S +Q+ + GT +
Sbjct: 353 MNRDHCNS---QQIIQHLEATVAELQQRLVRKDILISS-LQQSISAQQDVSYDGTFYWRV 408
Query: 801 SEKVQKEQK 809
+ QK+++
Sbjct: 409 CDVSQKQRE 417
Score = 50 (22.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/110 (25%), Positives = 46/110 (41%)
Query: 700 PKSETDVKAAVDEIKTEVEDKTNVVDTSS--KEFVTDRESHIAENVQPINKMVKEEVIEN 757
P ++T + + T E + +V +S K TD++ +N QP N KE I +
Sbjct: 167 PNNKTACPSCTS-VLTPRELQKHVCPSSGDKKTAKTDKKQ---KNNQPANSKKKEPCIFS 222
Query: 758 VEGQKDSANVDIKQEEHSVSKEVQEEPLLKTSTMQQGTQFGEQSEKVQKE 807
G N D +E S S + LL + Q T +E+V ++
Sbjct: 223 DVGCPFKGNPDKVKEHESCSHAGHLQLLLDVTRALQRT-LNSATERVYQD 271
>WB|WBGene00006565 [details] [associations]
symbol:tfg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0001558 "regulation of
cell growth" evidence=IMP] [GO:0040014 "regulation of multicellular
organism growth" evidence=IMP] [GO:0070971 "endoplasmic reticulum
exit site" evidence=IDA] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0032527 "protein exit from endoplasmic reticulum"
evidence=IMP] [GO:0070973 "protein localization to endoplasmic
reticulum exit site" evidence=IMP] [GO:0043621 "protein
self-association" evidence=IMP] InterPro:IPR000270 Pfam:PF00564
SMART:SM00666 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0018991 GO:GO:0006915 GO:GO:0043066 GO:GO:0002119
GO:GO:0001558 GO:GO:0018996 GO:GO:0040014 GO:GO:0010171
GO:GO:0040011 GO:GO:0009306 GO:GO:0008361 GO:GO:0043621
GO:GO:0043652 GO:GO:0032527 GO:GO:0070971 KO:K09292 GO:GO:0070973
EMBL:AL032652 RefSeq:NP_493462.1 ProteinModelPortal:Q9U1W1
SMR:Q9U1W1 DIP:DIP-26017N IntAct:Q9U1W1 MINT:MINT-1127053
STRING:Q9U1W1 PaxDb:Q9U1W1 EnsemblMetazoa:Y63D3A.5.1
EnsemblMetazoa:Y63D3A.5.2 GeneID:173277 KEGG:cel:CELE_Y63D3A.5
UCSC:Y63D3A.5.1 CTD:173277 WormBase:Y63D3A.5 eggNOG:NOG292374
GeneTree:ENSGT00510000047809 InParanoid:Q9U1W1 OMA:ATIPSFP
NextBio:878971 Uniprot:Q9U1W1
Length = 486
Score = 91 (37.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 29/81 (35%), Positives = 34/81 (41%)
Query: 836 SPPSLYGSSTLQQRPAAPSIFQAPPPGAVPQTQ---APTQFRPPMFKPEVPPGGIPVSGP 892
S S+ + QQ A P F PPP P AP Q + F PP G P G
Sbjct: 273 SHSSISSTPVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAP-PPQGAPQQGF 331
Query: 893 AASFGRGPGHNGPHQHSFESP 913
A +GP GP Q SF +P
Sbjct: 332 GAP-PQGPPQGGPPQGSFGAP 351
Score = 79 (32.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 856 FQAPPPGAVPQTQ-APTQFRPPMFKPEVPPGGIPVSGPAASFGRGPGHNGPHQHSFESPL 914
FQAPPP + + T + F P GG P SGP + +G G+ P Q +
Sbjct: 264 FQAPPPPMASHSSISSTPVQQQGFAPPQQFGGPPPSGPPSEYG---GYAPPQQQQQQFGA 320
Query: 915 VAPQG 919
PQG
Sbjct: 321 PPPQG 325
Score = 76 (31.8 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 40/119 (33%), Positives = 43/119 (36%)
Query: 1189 GGREFRRFGDPIGNSFH---DSRF--PVLPSHLRRGEFEGPGRTGDLIGQEFLPSHLRRG 1243
GG FG P FH F P P G F P ++G G F P G
Sbjct: 341 GGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPP-GA-FAPPPSAFG 398
Query: 1244 EPLGPHNLR-LGETVGLG-GFPGPARMEELGGPGNFPPPRLGEPGFRSSFSRQGFPNDG 1300
P GP G G G PG + GGPG F PP G PG GFP G
Sbjct: 399 APQGPGGPGGYGPPPPGGPGAPGSYGPPQ-GGPGGFGPPPPGGPGAYGP-PPTGFPPVG 455
Score = 58 (25.5 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 23/79 (29%), Positives = 32/79 (40%)
Query: 443 PLQHPMYVHPHTGAQSQMQNQFPQQTPSMRPAQS-------HATISNQPLSTGL-PPLGQ 494
PL++ PH + F Q P P + +ATI + P S PP+ +
Sbjct: 194 PLENHYAPPPHQQIPDDLNTSFSSQPPP--PIEQFGAIPPPNATIPSFPTSNAASPPVQE 251
Query: 495 VANIPPAQQLPVRPHAPQP 513
A PP QQ + AP P
Sbjct: 252 FAP-PPPQQQQQQFQAPPP 269
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 133 (51.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPC-LTYIVNTTQACPYDGYLVTEADSKPLV 72
L +Y CP+C + + EA+Q+ C H +CK C L + N CP D ++ E K L
Sbjct: 66 LESKYECPICLMAL--REAVQTPCGHRFCKACILKSLRNAGHKCPVDNEILME---KQLF 120
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + + V C GCT L H C F + V C++C +
Sbjct: 121 PDNFAKREILS-LRVKC--PNLGCTDTMELRHLEHHLVQCQFAS--VECSQCQGSFLKLL 175
Query: 133 VQEHAQN 139
+ +H ++
Sbjct: 176 LDKHMEH 182
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 133 (51.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 39/130 (30%), Positives = 55/130 (42%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPC-LTYIVNTTQACPYDGYLVTEADSKPLV 72
L +Y CP+C + + EA+Q+ C H +CK C L I + CP D + E L
Sbjct: 66 LESKYECPICLMAL--REAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLME---NQLF 120
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + + V C GCT L H C F V C++C
Sbjct: 121 PDNFAKREILS-LRVKC--PSQGCTETMELRHLERHLVRCDFAG--VECSQCQSSFPKYS 175
Query: 133 VQEHA-QNCP 141
+Q+H + CP
Sbjct: 176 LQKHKFEECP 185
>UNIPROTKB|F1N474 [details] [associations]
symbol:COL4A5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0005587 "collagen type
IV" evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR001442 Pfam:PF01413
PROSITE:PS51403 SMART:SM00111 GO:GO:0007528 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0031594 GO:GO:0005605 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:DAAA02071513 EMBL:DAAA02071512
IPI:IPI00729819 Ensembl:ENSBTAT00000019400 OMA:MPMNMEP
Uniprot:F1N474
Length = 1688
Score = 102 (41.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 78/299 (26%), Positives = 108/299 (36%)
Query: 838 PSLYGSSTLQQRPAAPSI-FQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASF 896
P G LQ P P I PG++ + P P + P PPG + GPA
Sbjct: 131 PGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY-PG-PPG---IQGPAGP- 184
Query: 897 GRGPGHNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
PG GP L+ P GP L P G G + GP
Sbjct: 185 ---PGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQG---P-KGEKGEQG-LQGP-- 234
Query: 957 GPGGPMDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQ-RSPLGPPSGTRSNMMRM 1015
PG P + + P++ E G + G D PG R P GPP G +
Sbjct: 235 -PGPPGQISEQKRPIDVEFQKGDQ-----GLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQ 288
Query: 1016 N-----GGPGSELRDERFKSFPDGRLNP-FPVDPARSVIDRGEFEEDLKQFSRPSHLDAE 1069
G PG + + + P +P +P +P R ++G+ + D P +
Sbjct: 289 GEPGKRGKPGKDGENGQ-PGIPGLPGDPGYPGEPGRDG-EKGQ-KGDTGLPGPPGLVIPR 345
Query: 1070 P-----VPKLGSHFLPSRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRF 1123
P V + G+ LP P D+G G+ GP P GL PG + +G P F
Sbjct: 346 PGTGVTVGEKGNIGLPGLPGDKGDRGFPGIQGP-P---GLPGPPGPAV--IGPPGPPGF 398
Score = 91 (37.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 41/109 (37%), Positives = 46/109 (42%)
Query: 1197 GDPIGNSFHDSRFPVLPSHLRR-GEFEGPGRTGDLIGQEFLPSHL-RRGEPLGPHNLRLG 1254
GDP G + P LP H R GE PG G L GQ LP +GEP P G
Sbjct: 650 GDP-GQTITQPGKPGLPGHPGRDGEVGLPGEPG-LPGQPGLPGIPGSKGEPGIP-----G 702
Query: 1255 ETVGLGGFPGPARMEELGGPGNFP--PPRLGEPGFRSSFSRQGFPNDGG 1301
+GL G PGP + GP P P R+G G GFP G
Sbjct: 703 --IGLPGPPGPKGFPGIPGPPGAPGSPGRIGLEG---PSGPPGFPGPKG 746
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 132 (51.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 38/130 (29%), Positives = 56/130 (43%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTT-QACPYDGYLVTEADSKPLV 72
L +Y CP+C + + EA+Q+ C H +CK C+ + CP D ++ E L
Sbjct: 64 LESKYECPICLMAL--REAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE---NQLF 118
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + +TV C GC + L H C F + V C +C Q
Sbjct: 119 PDNFAKREILS-LTVKC--PNKGCLQKMELRHLEDHQVHCEF--ALVNCPQCQRPFQKCQ 173
Query: 133 VQEHA-QNCP 141
V H ++CP
Sbjct: 174 VNTHIIEDCP 183
>UNIPROTKB|F6XG92 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21
EMBL:AAEX03006742 Ensembl:ENSCAFT00000031062 Uniprot:F6XG92
Length = 499
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 17 EYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTT-----QACPYDGYLVTEADSKPL 71
+Y C CR ++ Q+QC H YC CL+ I++++ AC ++G + E S +
Sbjct: 14 KYLCSACRNVL--RRPFQAQCGHRYCSYCLSSILSSSGPQNCAACVHEG-IYEEGIS--I 68
Query: 72 VESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRC-AIQ 127
+ES+ A + + V L +GCTW+G L E S C G+ P + C A +
Sbjct: 69 LESSSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYES----CHEGHCPFMLTECPACK 124
Query: 128 IVHR--QVQEHAQN-CP 141
+ R + + H+++ CP
Sbjct: 125 GLVRLGEKEHHSEHECP 141
>UNIPROTKB|F1PY23 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 CTD:7186 KO:K03173
PANTHER:PTHR10131:SF21 EMBL:AAEX03006742 RefSeq:XP_857289.1
Ensembl:ENSCAFT00000031061 GeneID:480673 KEGG:cfa:480673
Uniprot:F1PY23
Length = 501
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 17 EYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACPYDGYLVTEADSKPLV 72
+Y C CR ++ Q+QC H YC CL+ I+++ AC ++G + E S ++
Sbjct: 31 KYLCSACRNVL--RRPFQAQCGHRYCSYCLSSILSSGPQNCAACVHEG-IYEEGIS--IL 85
Query: 73 ESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRC-AIQI 128
ES+ A + + V L +GCTW+G L E S C G+ P + C A +
Sbjct: 86 ESSSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYES----CHEGHCPFMLTECPACKG 141
Query: 129 VHR--QVQEHAQN-CP 141
+ R + + H+++ CP
Sbjct: 142 LVRLGEKEHHSEHECP 157
>UNIPROTKB|E2R6C7 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 PANTHER:PTHR10131:SF21 Ensembl:ENSCAFT00000031062
Uniprot:E2R6C7
Length = 502
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 17 EYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACPYDGYLVTEADSKPLV 72
+Y C CR ++ Q+QC H YC CL+ I+++ AC ++G + E S ++
Sbjct: 31 KYLCSACRNVL--RRPFQAQCGHRYCSYCLSSILSSGPQNCAACVHEG-IYEEGIS--IL 85
Query: 73 ESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRC-AIQI 128
ES+ A + + V L +GCTW+G L E S C G+ P + C A +
Sbjct: 86 ESSSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYES----CHEGHCPFMLTECPACKG 141
Query: 129 VHR--QVQEHAQN-CP 141
+ R + + H+++ CP
Sbjct: 142 LVRLGEKEHHSEHECP 157
>UNIPROTKB|F1Q0F7 [details] [associations]
symbol:COL4A5 "Collagen alpha-5(IV) chain" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:AAEX03026757 EMBL:AAEX03026761
EMBL:AAEX03026758 EMBL:AAEX03026759 EMBL:AAEX03026760
Ensembl:ENSCAFT00000018078 Uniprot:F1Q0F7
Length = 1678
Score = 136 (52.9 bits), Expect = 0.00011, P = 0.00011
Identities = 130/505 (25%), Positives = 172/505 (34%)
Query: 838 PSLYGSSTLQQRPAAPSI-FQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASF 896
P G L+ P P I PG++ + P P + P PPG + GPA
Sbjct: 134 PGSPGFPGLEGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY-PG-PPG---IQGPAGPT 188
Query: 897 GRGPGHNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
G PG GP L+ P GP L P G G + GP
Sbjct: 189 GL-PGPIGPPG---PPGLMGPPGPPGLPGPKGNMGLNFQG---P-KGEKGEQG-LQGP-- 237
Query: 957 GPGGPMDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQ-RSPLGPPSGTRSNMMRM 1015
PG P + + P++ E G + G D PG R P GPP G +
Sbjct: 238 -PGPPGQISEQKRPIDVEFQKGDQ-----GLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQ 291
Query: 1016 N-----GGPGSELRDERFKSFPDGRLNP-FPVDPARSVIDRGEFEEDLKQFSRPSHLD-- 1067
G PG + + + P +P +P +P R ++G+ + D+ P
Sbjct: 292 GEPGKRGKPGKDGENGQ-PGIPGLPGDPGYPGEPGRDG-EKGQ-KGDIGSTGPPGLSKPG 348
Query: 1068 -AEPVPKLGSHFLPSRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFLPA 1126
V + G+ LP P ++G G+ GP P GL P L MG P F P
Sbjct: 349 TGVTVGEKGNMGLPGLPGEKGERGFPGIQGP-P---GLPGPPVLGTAVMGPPGPPGF-PG 403
Query: 1127 YHDDAAGRSDSSHAHPDFP----RPGRAYGRRHMGGLSPR-SPFREFCXXXXXXXXXXXX 1181
+ P FP +PG R G P SP
Sbjct: 404 ERGQKGDEGPPGISIPGFPGLDGQPGAPGLRGPPGPPGPHISPSPPGPPGSPGDRGLQGE 463
Query: 1182 RSVREDIGGREFRRFGDPIGNSFHDSRFPVLPSHLRRGEFEGPGRTGDLIGQEFL--PSH 1239
+ V+ D G F G + P LP G PG+ G+ G L P
Sbjct: 464 QGVKGDKGDTCFNCIGTGVSGPRGQPGLPGLPGP--PGSLGFPGQKGEK-GHAGLTGPKG 520
Query: 1240 LRR--GEPLGPHNL--RLGETVGLGGFPG-PARMEELGGPGNFPPPRLGEPGFRSSFSRQ 1294
L G P GP GE + FPG ELG PG P G PG + +
Sbjct: 521 LTGIPGAP-GPPGFPGSKGEPGDVLTFPGMKGDKGELGYPG---AP--GLPGLPGTPGQD 574
Query: 1295 GFPNDGGFYTGDMESIDNSRKRKPP 1319
G P G G+ I +R PP
Sbjct: 575 GLPGLPG-PKGEPGGIAFKGERGPP 598
>UNIPROTKB|J9NS71 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 OMA:PSDGCTW
PANTHER:PTHR10131:SF21 EMBL:AAEX03006742 Ensembl:ENSCAFT00000049927
Uniprot:J9NS71
Length = 523
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 17 EYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACPYDGYLVTEADSKPLV 72
+Y C CR ++ Q+QC H YC CL+ I+++ AC ++G + E S ++
Sbjct: 31 KYLCSACRNVL--RRPFQAQCGHRYCSYCLSSILSSGPQNCAACVHEG-IYEEGIS--IL 85
Query: 73 ESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRC-AIQI 128
ES+ A + + V L +GCTW+G L E S C G+ P + C A +
Sbjct: 86 ESSSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYES----CHEGHCPFMLTECPACKG 141
Query: 129 VHR--QVQEHAQN-CP 141
+ R + + H+++ CP
Sbjct: 142 LVRLGEKEHHSEHECP 157
>DICTYBASE|DDB_G0270014 [details] [associations]
symbol:DDB_G0270014 species:44689 "Dictyostelium
discoideum" [GO:2001070 "starch binding" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002044 InterPro:IPR013784
Pfam:PF00686 PROSITE:PS50089 PROSITE:PS51166 SMART:SM00184
SMART:SM01065 dictyBase:DDB_G0270014 Prosite:PS00518
EMBL:AAFI02000005 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49452 GO:GO:2001070 eggNOG:NOG254243
RefSeq:XP_646470.1 ProteinModelPortal:Q55CL1
EnsemblProtists:DDB0190739 GeneID:8617431 KEGG:ddi:DDB_G0270014
InParanoid:Q55CL1 OMA:EYKYCIS Uniprot:Q55CL1
Length = 206
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 9 LNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDGYLVTEADS 68
L + ++ + CP+ ++ + + + C H +C PCL + + + CP D VT+
Sbjct: 7 LFVDRISPHFICPIGGGVI--EDPVVTPCGHTFCNPCLIKWLQSRRQCPTDRLPVTD--- 61
Query: 69 KPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGC 112
K L++ N + ++TV C + GC W G SH + C
Sbjct: 62 KQLIQ-NWLVYYYTSELTVRCDHYNKGCLWTGKWCVLGSHLTQC 104
>UNIPROTKB|Q01955 [details] [associations]
symbol:COL4A3 "Collagen alpha-3(IV) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IDA;TAS]
[GO:0005587 "collagen type IV" evidence=IDA] [GO:0005604 "basement
membrane" evidence=IDA] [GO:0006917 "induction of apoptosis"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=NAS]
[GO:0008191 "metalloendopeptidase inhibitor activity" evidence=NAS]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016525
"negative regulation of angiogenesis" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0032836 "glomerular basement
membrane development" evidence=ISS] [GO:0005198 "structural
molecule activity" evidence=NAS] [GO:0007605 "sensory perception of
sound" evidence=TAS] [GO:0008015 "blood circulation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0007411
"axon guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] InterPro:IPR001442 Pfam:PF01413
PROSITE:PS51403 SMART:SM00111 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0008285 GO:GO:0006917 GO:GO:0005198 GO:GO:0008015
GO:GO:0008283 GO:GO:0009749 InterPro:IPR016187 SUPFAM:SSF56436
GO:GO:0007155 GO:GO:0005788 GO:GO:0006919 GO:GO:0007605
GO:GO:0008191 GO:GO:0007166 GO:GO:0005178 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0016525 EMBL:AC097662
Pathway_Interaction_DB:avb3_integrin_pathway GO:GO:0005201
HOVERGEN:HBG004933 GO:GO:0005587 Gene3D:2.170.240.10 KO:K06237
OrthoDB:EOG42JNQS EMBL:X80031 EMBL:AJ288487 EMBL:AJ288488
EMBL:AJ288489 EMBL:AJ288490 EMBL:AJ288491 EMBL:AJ288492
EMBL:AJ288493 EMBL:AJ288494 EMBL:AJ288495 EMBL:AJ288496
EMBL:AJ288497 EMBL:AJ288498 EMBL:AJ288499 EMBL:AJ288500
EMBL:AJ288501 EMBL:AJ288502 EMBL:AJ288503 EMBL:AJ288504
EMBL:AJ288505 EMBL:AJ288506 EMBL:AJ288507 EMBL:AJ288508
EMBL:AJ288509 EMBL:AJ288510 EMBL:AJ288511 EMBL:AJ288512
EMBL:AJ288513 EMBL:AJ288514 EMBL:AJ288515 EMBL:AJ288516
EMBL:AJ288517 EMBL:AJ288518 EMBL:AJ288519 EMBL:AJ288520
EMBL:AJ288521 EMBL:AJ288522 EMBL:AJ288523 EMBL:AJ288524
EMBL:AJ288525 EMBL:AJ288526 EMBL:AJ288527 EMBL:AJ288528
EMBL:AJ288529 EMBL:AJ288530 EMBL:AJ288531 EMBL:AJ288532
EMBL:AJ288533 EMBL:AJ288534 EMBL:AJ288535 EMBL:AJ288536
EMBL:AJ288537 EMBL:AJ288538 EMBL:AC079235 EMBL:AC107069
EMBL:AB008496 EMBL:M81379 EMBL:M92993 EMBL:AF258351 EMBL:U02519
EMBL:U02520 EMBL:S55790 EMBL:L08650 IPI:IPI00010360 IPI:IPI00332623
IPI:IPI00396322 IPI:IPI00413923 IPI:IPI00829991 PIR:A49736
PIR:A54763 PIR:B49736 PIR:S69113 RefSeq:NP_000082.2
UniGene:Hs.570065 ProteinModelPortal:Q01955 SMR:Q01955
IntAct:Q01955 STRING:Q01955 PhosphoSite:Q01955 DMDM:134035067
PaxDb:Q01955 PRIDE:Q01955 Ensembl:ENST00000396578 GeneID:1285
KEGG:hsa:1285 UCSC:uc002vom.2 CTD:1285 GeneCards:GC02P227993
H-InvDB:HIX0002893 H-InvDB:HIX0029836 HGNC:HGNC:2204 HPA:HPA042064
MIM:104200 MIM:120070 MIM:141200 MIM:203780 neXtProt:NX_Q01955
Orphanet:88918 Orphanet:88919 Orphanet:97562 PharmGKB:PA26719
OMA:QCPYVPG GenomeRNAi:1285 NextBio:5191 ArrayExpress:Q01955
Bgee:Q01955 CleanEx:HS_COL4A3 Genevestigator:Q01955
GermOnline:ENSG00000169031 GO:GO:0032836 Uniprot:Q01955
Length = 1670
Score = 113 (44.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 87/292 (29%), Positives = 115/292 (39%)
Query: 846 LQQR--PAAPSIFQAP-PPGAVPQTQAPTQFRPPMFKPEVP--PG-----GIP-VSG--- 891
L QR P P I P G + P PP P P PG GIP V G
Sbjct: 870 LGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPG-PPGNPGTPGQRGSPGIPGVKGQRG 928
Query: 892 -PAASFGRGP-GHNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVP-LSGFDSHV 948
P A +G G+ GP + S ++ +G L R VP + G
Sbjct: 929 TPGAKGEQGDKGNPGPSEISH---VIGDKGEPGLKGFAGNPGEKG-NRGVPGMPGLKGLK 984
Query: 949 GTMVGPAYGPGGPM-DLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQ-QRSPLG-PP 1005
G + GPA GP GP DL NP E + G PG M + PGS+ +R LG P
Sbjct: 985 G-LPGPA-GPPGPRGDLGSTGNPGEPGL-RGI-PGSM----GNMGMPGSKGKRGTLGFPG 1036
Query: 1006 SGTRSNMMRMNGGPGSELRDERFKSFPDGRLNPFPVDPARSVIDRGEFEE--DLKQFSRP 1063
R + ++G G D+ + +G P P P G+ + ++ Q P
Sbjct: 1037 RAGRPGLPGIHGLQG----DKGEPGYSEGT-RPGPPGPTGDPGLPGDMGKKGEMGQPGPP 1091
Query: 1064 SHLD-AEPVPKLGSHFLPSRPFDRGPHGYGMDMGPRPFERGLSYDPGLKLDP 1114
HL A P GS P P GPHG D+G + +GL PG++ P
Sbjct: 1092 GHLGPAGPEGAPGSPGSPGLPGKPGPHG---DLGFKGI-KGLLGPPGIRGPP 1139
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 34/96 (35%), Positives = 43/96 (44%)
Query: 1210 PVLPSHLRRGE--FEG-PGRTGDLIGQEFLPSHLRRGEPLGPHNLRLGETVGLGGFPGPA 1266
P LP RG+ F+G PG G+ FL S G P+GP G+ G PG
Sbjct: 1300 PGLPGP--RGDPGFQGFPGVKGEKGNPGFLGSIGPPG-PIGPKG-----PPGVRGDPGTL 1351
Query: 1267 RMEEL-GGPGNFPPPRLGEPGFRSSFSRQGFPNDGG 1301
++ L G PG PP GEPG + G P + G
Sbjct: 1352 KIISLPGSPG--PPGTPGEPGMQGEPGPPGPPGNLG 1385
Score = 69 (29.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 26/81 (32%), Positives = 31/81 (38%)
Query: 1224 PGRTGDL--IGQEFLPSHLRRGEPLGPHNLRLGETVGLGGFPGPARMEELGGPGNFPPPR 1281
PG+TG+ G P P G H + + G G PGP G PP R
Sbjct: 1235 PGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMG-PPGR 1293
Query: 1282 LGEPGFRSSFSRQGFPNDGGF 1302
LG PG +G P GF
Sbjct: 1294 LGAPGTPGLPGPRGDPGFQGF 1314
Score = 69 (29.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 30/90 (33%), Positives = 37/90 (41%)
Query: 1218 RGEFEGPGRTGDL-----IGQEFLPSHLRRGEPLGPHNLRLGETVGLGGFPG-PARMEEL 1271
+GE PG G + IG + P RG+P + L + G G PG P E
Sbjct: 1318 KGEKGNPGFLGSIGPPGPIGPKGPPGV--RGDPGTLKIISLPGSPGPPGTPGEPGMQGEP 1375
Query: 1272 GGPGNFPPPRLGEPGFRSSFSRQGFPNDGG 1301
G PG PP LG G R + G P G
Sbjct: 1376 GPPG--PPGNLGPCGPRGKPGKDGKPGTPG 1403
>UNIPROTKB|P29400 [details] [associations]
symbol:COL4A5 "Collagen alpha-5(IV) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005587 "collagen type IV"
evidence=IEA] [GO:0005605 "basal lamina" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=IEA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 GO:GO:0007528 InterPro:IPR016187 SUPFAM:SSF56436
GO:GO:0031594 GO:GO:0030198 GO:GO:0005788 GO:GO:0005605
EMBL:CH471120 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GO:GO:0005201 HOVERGEN:HBG004933 HOGENOM:HOG000085652 GO:GO:0005587
Gene3D:2.170.240.10 KO:K06237 CTD:1287 EMBL:M58526 EMBL:AL034369
EMBL:AL031622 EMBL:AL035425 EMBL:AL136364 EMBL:M90464 EMBL:U04520
EMBL:U04470 EMBL:U04471 EMBL:U04472 EMBL:U04473 EMBL:U04474
EMBL:U04476 EMBL:U04477 EMBL:U04478 EMBL:U04479 EMBL:U04480
EMBL:U04483 EMBL:U04485 EMBL:U04486 EMBL:U04487 EMBL:U04488
EMBL:U04489 EMBL:U04490 EMBL:U04491 EMBL:U04492 EMBL:U04493
EMBL:U04494 EMBL:U04495 EMBL:U04496 EMBL:U04497 EMBL:U04498
EMBL:U04499 EMBL:U04500 EMBL:U04501 EMBL:U04502 EMBL:U04503
EMBL:U04504 EMBL:U04505 EMBL:U04506 EMBL:U04507 EMBL:U04508
EMBL:U04509 EMBL:U04510 EMBL:U04511 EMBL:U04512 EMBL:U04514
EMBL:U04515 EMBL:U04516 EMBL:U04517 EMBL:U04518 EMBL:U04519
EMBL:AF199451 EMBL:AF199452 EMBL:M63473 EMBL:M63455 EMBL:M63456
EMBL:M63457 EMBL:M63458 EMBL:M63459 EMBL:M63460 EMBL:M63461
EMBL:M63462 EMBL:M63463 EMBL:M63464 EMBL:M63465 EMBL:M63466
EMBL:M63467 EMBL:M63468 EMBL:M63470 EMBL:M63471 EMBL:M63472
EMBL:M31115 EMBL:Z37153 EMBL:S69168 EMBL:S59334 EMBL:S75903
IPI:IPI00021715 IPI:IPI00216007 PIR:S22917 RefSeq:NP_000486.1
RefSeq:NP_203699.1 UniGene:Hs.369089 ProteinModelPortal:P29400
SMR:P29400 IntAct:P29400 MINT:MINT-1388512 STRING:P29400
PhosphoSite:P29400 DMDM:461675 PaxDb:P29400 PRIDE:P29400
Ensembl:ENST00000328300 Ensembl:ENST00000361603 GeneID:1287
KEGG:hsa:1287 UCSC:uc004enz.1 GeneCards:GC0XP107683
H-InvDB:HIX0028371 HGNC:HGNC:2207 MIM:301050 MIM:303630
neXtProt:NX_P29400 Orphanet:88917 Orphanet:1018 PharmGKB:PA26722
OMA:CEPGPPG PhylomeDB:P29400 ChiTaRS:COL4A5 GenomeRNAi:1287
NextBio:5205 ArrayExpress:P29400 Bgee:P29400 CleanEx:HS_COL4A5
Genevestigator:P29400 GermOnline:ENSG00000188153 Uniprot:P29400
Length = 1685
Score = 103 (41.3 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 132/478 (27%), Positives = 164/478 (34%)
Query: 860 PPGAVPQTQAPTQFRPPMFKPEV----PPGGIPVSGPAASFG-RG-PGHNG-PHQHSFES 912
P G V P PP P + PPG + GP G G PG G P +
Sbjct: 797 PKGDVGPNGQPGPMGPPGL-PGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDV 855
Query: 913 PLVAPQGPYNLXXXXXXXXXXXXQRSVPL------SGFDSHVGTM--VGPAYGPGGPMDL 964
P P G S L SGF G M +GP GP GP+ +
Sbjct: 856 P--GPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPP-GPPGPLGI 912
Query: 965 KQPSN-P-MEAEMFTGQRPGYMDGRESDSHFPGSQQRSPL-GPPSGTRSNMMRMNGGPGS 1021
S P ++ + +PG + G + GS+ L GPP N++ G G
Sbjct: 913 PGRSGVPGLKGDDGLQGQPG-LPGPTGEK---GSKGEPGLPGPPGPMDPNLLGSKGEKGE 968
Query: 1022 E-LRDERFKSFPDGRLNPFPVDPARSVIDRGEFEEDLKQFSRPSHLDAEPVPKLGSHFLP 1080
L S P G P DP + + G+ P L P PK G+ LP
Sbjct: 969 PGLPGIPGVSGPKG-YQGLPGDPGQPGLS-GQ----------PG-LPGPPGPK-GNPGLP 1014
Query: 1081 SRPFDRGPHGY-GM--DMG-PRPFERGLSYDPGLKLDPMGASAPSRFLPAYHDDAAGRSD 1136
+P GP G G DMG P P +G+ PG P +P LP D
Sbjct: 1015 GQPGLIGPPGLKGTIGDMGFPGP--QGVEGPPGPSGVPGQPGSPG--LPGQKGDKGDPGI 1070
Query: 1137 SSHAHPDFPRP-GR----AY-GRRHMGGLSPRSPFREFCXXXXXXXXXXXXRSVREDIGG 1190
SS P P P G Y G + G S P G
Sbjct: 1071 SSIGLPGLPGPKGEPGLPGYPGNPGIKG-SVGDPGLPGLPGTPGAKGQPGLPGFPGTPGP 1129
Query: 1191 REFRRFGDPIGNSFHDSRFPVLPSHLRRGEFEG-PGRTGDL--IGQEFLPSHL-RRGEPL 1246
+ P GN P P + G G PG G+ GQ+ +P ++GEP
Sbjct: 1130 PGPKGISGPPGNP----GLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG 1185
Query: 1247 GPHNLRLGETVGLGGFPGPARMEELGG-PGN--FPPPRLGEPGFRSSFSRQGFPNDGG 1301
P G GL G G L G PGN P P+ GEPGF QG P G
Sbjct: 1186 QPGFGNPGPP-GLPGLSGQKGDGGLPGIPGNPGLPGPK-GEPGFHGFPGVQGPPGPPG 1241
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 1258 GLGGFPGPARMEELGGPGNFP--PPRLGEPGFRSSFSRQGFP 1297
GL G PGP + L GP P P R G PGF + R+G P
Sbjct: 1385 GLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDP 1426
Score = 60 (26.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/70 (32%), Positives = 25/70 (35%)
Query: 837 PPSLYGSSTLQQRPAAPSIFQAPPPGAVPQTQAPTQFRPP-MFKPEVPPGG-IPVSGPAA 894
PP G + P I PPG Q AP PP P +PP I GP
Sbjct: 398 PPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPG 457
Query: 895 SFGRGPGHNG 904
G PG G
Sbjct: 458 PPG-SPGDKG 466
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 34/127 (26%), Positives = 56/127 (44%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTT-QACPYDGYLVTEADSKPLV 72
L +Y CP+C + + EA+Q+ C H +CK C+ + CP D ++ E L
Sbjct: 66 LESKYECPICLMAL--REAVQTPCGHRFCKACIVKSLRDAGHKCPVDNEILME---NQLF 120
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + + V C GCT L H C F + V C++C +
Sbjct: 121 PDNFAKREILS-LKVKC--PSQGCTETMELRHLERHLGQCQFAS--VECSQCQGSFPKSR 175
Query: 133 VQEHAQN 139
+++H ++
Sbjct: 176 LEKHMEH 182
>UNIPROTKB|J9P756 [details] [associations]
symbol:COL4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:AAEX03014413 EMBL:AAEX03014412
Ensembl:ENSCAFT00000049664 Uniprot:J9P756
Length = 1664
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 73/249 (29%), Positives = 90/249 (36%)
Query: 1085 DRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFLPAY--HDDAAGRSDS----- 1137
D+G GY G RP GL DPGL MG R LP H AG +
Sbjct: 1045 DKGEPGYSA--GTRPGPPGLKGDPGLP-GAMGRKG-ERGLPGTPGHSGPAGTEGAPGHPG 1100
Query: 1138 SHAHPDFPRPGRAYGRRHMGGLSPRSPFREFCXXXXXXXXXXXXRSVREDIGGREFRRFG 1197
S HP P P G + + G P SP + +R + G R G
Sbjct: 1101 SPGHPGKPGPDGDLGLKGIKGF-PGSPGVKGPPGPPGILGSPGPMGMRGNQG-----RDG 1154
Query: 1198 DPIGNSFHDSRFPVLPSHLRRGEFEGP-GRTGDLIGQEFLPSHLRRGEPLGPHNLRLGET 1256
P G +L +H G GP G GD G LP R +G R G T
Sbjct: 1155 IP-GPPGEKGETGLLGAHPGPGGIPGPPGAKGDR-GAPGLPGPPGRKGAVGDAGPR-GPT 1211
Query: 1257 VGLGGFPGPARMEELGGPGNFPPPRLGE---PGFRSSFSRQGFPNDGGFYTGDMESIDNS 1313
G+ G PGP G PG P + G PGFR + G P G + ++ D
Sbjct: 1212 -GMTGLPGPP-----GFPGAVIPGQKGNRGPPGFRGNPGEPGPPGPPGSHVKGIKG-DKG 1264
Query: 1314 RKRKPPSMG 1322
+P G
Sbjct: 1265 LMGEPGPRG 1273
Score = 84 (34.6 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 76/293 (25%), Positives = 98/293 (33%)
Query: 838 PSLYGSSTLQQRPAAPSIFQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASFG 897
P+L G Q P P I +P P P PP + P+ PG G + G
Sbjct: 579 PALSGEKGDQGPPGDPGIPGSPGPAGPPG--------PPNYGPQGEPGPKGTQGVPGAPG 630
Query: 898 RGPGHNGPH-QHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
PG GP + +P+ P GP S+ G D G + GP
Sbjct: 631 P-PGEAGPKGEFGISTPVPGPPGPPGPPGYAGPRGPPGIPGSIGKCG-DP--G-LPGPDG 685
Query: 957 GPGGP-MDLKQPSNPMEAEMFTGQR-----PGYMD--GRESDSHFPGSQQRSPL---GPP 1005
PG P + P P + F G + PG M G + PG++ L G P
Sbjct: 686 EPGIPGIGFPGPPGPKGDQGFPGAKGAPGCPGEMGKPGSPGEPGLPGAKGEPGLAIPGEP 745
Query: 1006 SGTRSNMMRMNGGPGSELRDERFKSFPD----GRLNPFPVDPARSVIDRGEFEEDLKQFS 1061
R N G E+ P G L+ P DP + GE
Sbjct: 746 GIPGFPGERGNSGENGEIGLPGLPGLPGIPGTGGLDGPPGDPGKPG-PPGEKGPPGSCTE 804
Query: 1062 RPSHLDAEPVPKL-GSHFLPSRPFDRGPHGY----GMDMGPRPFERGLSYDPG 1109
P A +P L G P R + GP G G+D P E G PG
Sbjct: 805 GPR--GAHGLPGLNGLEGQPGRRGETGPKGDPGIPGLDRSGFPGEPGPPGMPG 855
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 465 PQQTPSMRPAQSHATISNQPLSTGLPPLGQVANIPPAQ 502
P+ P + Q A I +P GLP L + IP Q
Sbjct: 461 PKGEPGLLCVQC-AYIPGRPGLPGLPGLDGIKGIPGGQ 497
>UNIPROTKB|F1PM98 [details] [associations]
symbol:COL4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:GMRGNQG EMBL:AAEX03014413
EMBL:AAEX03014412 Ensembl:ENSCAFT00000016556 Uniprot:F1PM98
Length = 1670
Score = 110 (43.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 73/249 (29%), Positives = 90/249 (36%)
Query: 1085 DRGPHGYGMDMGPRPFERGLSYDPGLKLDPMGASAPSRFLPAY--HDDAAGRSDS----- 1137
D+G GY G RP GL DPGL MG R LP H AG +
Sbjct: 1051 DKGEPGYSA--GTRPGPPGLKGDPGLP-GAMGRKG-ERGLPGTPGHSGPAGTEGAPGHPG 1106
Query: 1138 SHAHPDFPRPGRAYGRRHMGGLSPRSPFREFCXXXXXXXXXXXXRSVREDIGGREFRRFG 1197
S HP P P G + + G P SP + +R + G R G
Sbjct: 1107 SPGHPGKPGPDGDLGLKGIKGF-PGSPGVKGPPGPPGILGSPGPMGMRGNQG-----RDG 1160
Query: 1198 DPIGNSFHDSRFPVLPSHLRRGEFEGP-GRTGDLIGQEFLPSHLRRGEPLGPHNLRLGET 1256
P G +L +H G GP G GD G LP R +G R G T
Sbjct: 1161 IP-GPPGEKGETGLLGAHPGPGGIPGPPGAKGDR-GAPGLPGPPGRKGAVGDAGPR-GPT 1217
Query: 1257 VGLGGFPGPARMEELGGPGNFPPPRLGE---PGFRSSFSRQGFPNDGGFYTGDMESIDNS 1313
G+ G PGP G PG P + G PGFR + G P G + ++ D
Sbjct: 1218 -GMTGLPGPP-----GFPGAVIPGQKGNRGPPGFRGNPGEPGPPGPPGSHVKGIKG-DKG 1270
Query: 1314 RKRKPPSMG 1322
+P G
Sbjct: 1271 LMGEPGPRG 1279
Score = 84 (34.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 76/293 (25%), Positives = 98/293 (33%)
Query: 838 PSLYGSSTLQQRPAAPSIFQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASFG 897
P+L G Q P P I +P P P PP + P+ PG G + G
Sbjct: 585 PALSGEKGDQGPPGDPGIPGSPGPAGPPG--------PPNYGPQGEPGPKGTQGVPGAPG 636
Query: 898 RGPGHNGPH-QHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY 956
PG GP + +P+ P GP S+ G D G + GP
Sbjct: 637 P-PGEAGPKGEFGISTPVPGPPGPPGPPGYAGPRGPPGIPGSIGKCG-DP--G-LPGPDG 691
Query: 957 GPGGP-MDLKQPSNPMEAEMFTGQR-----PGYMD--GRESDSHFPGSQQRSPL---GPP 1005
PG P + P P + F G + PG M G + PG++ L G P
Sbjct: 692 EPGIPGIGFPGPPGPKGDQGFPGAKGAPGCPGEMGKPGSPGEPGLPGAKGEPGLAIPGEP 751
Query: 1006 SGTRSNMMRMNGGPGSELRDERFKSFPD----GRLNPFPVDPARSVIDRGEFEEDLKQFS 1061
R N G E+ P G L+ P DP + GE
Sbjct: 752 GIPGFPGERGNSGENGEIGLPGLPGLPGIPGTGGLDGPPGDPGKPG-PPGEKGPPGSCTE 810
Query: 1062 RPSHLDAEPVPKL-GSHFLPSRPFDRGPHGY----GMDMGPRPFERGLSYDPG 1109
P A +P L G P R + GP G G+D P E G PG
Sbjct: 811 GPR--GAHGLPGLNGLEGQPGRRGETGPKGDPGIPGLDRSGFPGEPGPPGMPG 861
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 465 PQQTPSMRPAQSHATISNQPLSTGLPPLGQVANIPPAQ 502
P+ P + Q A I +P GLP L + IP Q
Sbjct: 467 PKGEPGLLCVQC-AYIPGRPGLPGLPGLDGIKGIPGGQ 503
>MGI|MGI:88467 [details] [associations]
symbol:Col1a1 "collagen, type I, alpha 1" species:10090 "Mus
musculus" [GO:0001501 "skeletal system development"
evidence=ISO;IMP] [GO:0001568 "blood vessel development"
evidence=ISO;IMP] [GO:0001957 "intramembranous ossification"
evidence=IGI] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IDA] [GO:0005581
"collagen" evidence=IMP;IDA] [GO:0005584 "collagen type I"
evidence=ISO;IMP;IDA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007601
"visual perception" evidence=ISO] [GO:0007605 "sensory perception
of sound" evidence=ISO] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=ISO] [GO:0010812
"negative regulation of cell-substrate adhesion" evidence=IDA]
[GO:0015031 "protein transport" evidence=IMP] [GO:0030199 "collagen
fibril organization" evidence=ISO] [GO:0030335 "positive regulation
of cell migration" evidence=ISO] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0032964 "collagen biosynthetic process"
evidence=ISO] [GO:0034504 "protein localization to nucleus"
evidence=ISO] [GO:0034505 "tooth mineralization" evidence=ISO]
[GO:0042060 "wound healing" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0043588 "skin development"
evidence=IMP] [GO:0043589 "skin morphogenesis" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=ISO]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0060325 "face morphogenesis" evidence=IGI] [GO:0060346 "bone
trabecula formation" evidence=IGI] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IMP] [GO:0070208 "protein heterotrimerization"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 MGI:MGI:88467 GO:GO:0005737
GO:GO:0045893 GO:GO:0043588 GO:GO:0005615 GO:GO:0071363
GO:GO:0046872 GO:GO:0015031 GO:GO:0007601 GO:GO:0071300
GO:GO:0043434 GO:GO:0030199 GO:GO:0007584 GO:GO:0010035
GO:GO:0007605 GO:GO:0010718 GO:GO:0030335 GO:GO:0042542
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GO:GO:0071260 GO:GO:0001568 GO:GO:0001649 GO:GO:0051591
GO:GO:0034505 GO:GO:0090263 GO:GO:0010812 GO:GO:0060325
GO:GO:0032964 GO:GO:0071230 GO:GO:0048706 GO:GO:0001957
GO:GO:0034504 GO:GO:0001958 GO:GO:0060351 GO:GO:0005201
GO:GO:0043589 CTD:1277 GeneTree:ENSGT00660000095287
HOVERGEN:HBG004933 KO:K06236 OMA:VAYMDQQ OrthoDB:EOG4S4PHP
GO:GO:0005584 GO:GO:0060346 ChiTaRS:COL1A1 GO:GO:0031960
EMBL:U08020 EMBL:AL662790 EMBL:AL606480 EMBL:BC050014 EMBL:BC059281
EMBL:K01688 EMBL:S67530 EMBL:S67482 EMBL:X54876 EMBL:M14423
EMBL:M17491 EMBL:K03036 EMBL:K03029 EMBL:K03030 EMBL:K03031
EMBL:K03032 EMBL:K03033 EMBL:K03034 EMBL:K03035 EMBL:X06753
EMBL:X15896 EMBL:X57981 IPI:IPI00329872 IPI:IPI00623191 PIR:I49558
PIR:S57243 RefSeq:NP_031768.2 UniGene:Mm.277735 UniGene:Mm.458212
ProteinModelPortal:P11087 SMR:P11087 IntAct:P11087 STRING:P11087
PhosphoSite:P11087 PaxDb:P11087 PRIDE:P11087
Ensembl:ENSMUST00000001547 GeneID:12842 KEGG:mmu:12842
UCSC:uc007kzn.1 InParanoid:P11087 NextBio:282376 PMAP-CutDB:P11087
Bgee:P11087 CleanEx:MM_COL1A1 Genevestigator:P11087
GermOnline:ENSMUSG00000001506 Uniprot:P11087
Length = 1453
Score = 111 (44.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 72/263 (27%), Positives = 89/263 (33%)
Query: 860 PPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASFGRGPGHNGPHQHSFESPLVA--- 916
PPGA P P F+ P +P P G P+ GP G PG NG + +
Sbjct: 181 PPGA-P---GPQGFQGPPGEPGEPGGSGPM-GPRGPPGP-PGKNGDDGEAGKPGRPGERG 234
Query: 917 PQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTM--VGPAYGPGGPMDLKQPSNPMEAE 974
P GP + SG D G GP PG P + P M
Sbjct: 235 PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ-MGPR 293
Query: 975 MFTGQR-----PGYMDGRESDSHFPGSQQRSPLGP--PSGTRSNMMRMNGGPGSELRDER 1027
G+R PG R +D + P GP P G + G G + R
Sbjct: 294 GLPGERGRPGPPGTAGARGNDGAVGAAGPPGPTGPTGPPGF-PGAVGAKGEAGPQ--GAR 350
Query: 1028 FKSFPDG-RLNPFPVDPARSVIDRGEFEEDLKQFSRPSHLDAEPVPKLGSHFLPSRPFDR 1086
P G R P P PA + G D +P A P + P P R
Sbjct: 351 GSEGPQGVRGEPGPPGPAGAAGPAGNPGAD----GQPGAKGANGAPGIAG--APGFPGAR 404
Query: 1087 GPHGYGMDMGPRPFERGLSYDPG 1109
GP G GP P +G S +PG
Sbjct: 405 GPSGPQGPSGP-PGPKGNSGEPG 426
Score = 74 (31.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/64 (39%), Positives = 29/64 (45%)
Query: 1245 PLGPHNLRLGE-----TVGLGGFPGPARME-ELGGPGNFPPPR-LGEPGFRSSFSRQGFP 1297
P GP R GE + G G PGPA E G PG P LG PG + +GFP
Sbjct: 613 PAGPAGER-GEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFP 671
Query: 1298 NDGG 1301
+ G
Sbjct: 672 GERG 675
Score = 70 (29.7 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 31/89 (34%), Positives = 37/89 (41%)
Query: 1223 GP-GRTGDL--IGQEFLPSHLRRGEPLGPHNLRLGETVGLGGFPGP-------ARMEELG 1272
GP G+TG GQ+ P P GP R G+ G+ GFPGP + E G
Sbjct: 537 GPDGKTGPPGPAGQDGRPG------PAGPPGAR-GQA-GVMGFPGPKGTAGEPGKAGERG 588
Query: 1273 GPGNFPPPRLGEPGFRSSFSRQGFPNDGG 1301
PG PP +G G QG P G
Sbjct: 589 LPG--PPGAVGPAGKDGEAGAQGAPGPAG 615
>UNIPROTKB|K7GN38 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR027130 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AEMK01103347 EMBL:CU915362 EMBL:FP565698
Ensembl:ENSSSCT00000034241 Uniprot:K7GN38
Length = 232
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 11 IQSLAGEYFCPVCRLLVY-PNEALQSQCTHLYCKPCLTYI--VNTTQACPYDGYLVTEAD 67
++ L Y C CR +++ P+ Q+ C H +C+ C+ + +N CP D ++
Sbjct: 36 VEPLEERYRCAFCRSVLHNPH---QTGCGHRFCQDCILSLRELNAVPLCPVDKEVIK--- 89
Query: 68 SKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCN-RCAI 126
S+ + + N E + + V C + GCT + L H C F + CN RC
Sbjct: 90 SQEVFKDNCCKREVLN-LYVFCK-NAPGCTAKIILGRYQDHLQQCLF-QAVQCCNERCRE 146
Query: 127 QIVHRQVQEHA 137
++ + ++EHA
Sbjct: 147 PVLRKDLKEHA 157
>UNIPROTKB|E1BTY1 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033209
"tumor necrosis factor-mediated signaling pathway" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IEA]
[GO:0005174 "CD40 receptor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=IEA]
[GO:0046625 "sphingolipid binding" evidence=IEA] [GO:0051023
"regulation of immunoglobulin secretion" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0070207 "protein
homotrimerization" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IEA] [GO:2001238
"positive regulation of extrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0002218 "activation of innate immune response"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0002218 GO:GO:0004842 GO:GO:0007250 GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:2001238 GO:GO:0043623
SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743 GO:GO:0051023
GO:GO:0090073 GO:GO:0043507 Reactome:REACT_147795 GO:GO:0046625
GO:GO:0002726 GeneTree:ENSGT00550000074359 OMA:PSDGCTW
PANTHER:PTHR10131:SF21 EMBL:AADN02026991 IPI:IPI00600516
ProteinModelPortal:E1BTY1 Ensembl:ENSGALT00000014665 Uniprot:E1BTY1
Length = 527
Score = 129 (50.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 44/151 (29%), Positives = 68/151 (45%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF E IL + L +Y C CR ++ Q+QC H YC CL I+++ +C
Sbjct: 18 GFAKE-ILGTK-LEVKYLCSDCRNIL--RRPFQAQCGHRYCSYCLKKIISSGPQKCASCI 73
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAF 114
+G + E S ++E++ A + + V L GCTW+G + E S C
Sbjct: 74 QEG-IYEEGIS--ILETSSAFPDNAARREVESLPAVCINEGCTWKGTIKEYES----CHE 126
Query: 115 GNSP---VVCNRCAIQIVHRQVQEHAQN-CP 141
GN P + C C I + + H++ CP
Sbjct: 127 GNCPFLLIECQACRGVIPLNEKERHSERECP 157
Score = 44 (20.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 1308 ESIDNSRKRKPPSMGWCRICKVDC-ETVDGLDL--HSQT--REHQKMAMDMVLSIKQNA 1361
+ + N K K P CR V C E V+ L H EH M + VLS+K +
Sbjct: 204 DHVKNCGKCKVP----CRFKVVGCAEMVENEKLPEHESKCLAEHLYMLLSFVLSLKSGS 258
>UNIPROTKB|F1Q133 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:FAPTGEK EMBL:AAEX03013382
EMBL:AAEX03013383 Ensembl:ENSCAFT00000009808 Uniprot:F1Q133
Length = 1623
Score = 106 (42.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 95/345 (27%), Positives = 128/345 (37%)
Query: 850 PAAPSIFQA-PPPG--AVPQTQAPTQFRPPMFKPEVPPGGIPVS-GPAASFGRGP-GHNG 904
P P A PPG + P + P P VP G P + GP G+GP G +G
Sbjct: 717 PGVPGEHGAIGPPGLQGIRGDPGPPGLQGPKGAPGVPGIGPPGAVGPPG--GQGPPGSSG 774
Query: 905 PH----QHSFES-PLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAY-GP 958
P + F P + GP Q +P G GT P + GP
Sbjct: 775 PPGVKGEKGFPGFPGLDMPGPKG-DKGSQGLPGLTGQSGLP--GLPGQQGTPGVPGFPGP 831
Query: 959 GGPMDLK----QPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQRSPLGPPS--GTRSNM 1012
G M + QP +P A + PG + G + D FPGS P G P G + ++
Sbjct: 832 KGEMGVMGTPGQPGSPGPAGL-----PG-LPGEKGDHGFPGSS--GPRGDPGFKGDKGDV 883
Query: 1013 MRMNGGPGS-------ELRDERFKSFPDGRLNPFPVDPARSVIDRGEFEEDLKQFSRPSH 1065
+ G PGS ++ ++ G++ P +R D G K + H
Sbjct: 884 -GLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPTGDKGSRG--DPGTPGVPGKD-GQAGH 939
Query: 1066 LDAEPVPK--LGSHFLPSRPFDRGPHGY--GMDMGPRPFERGLSYDPGLKLDPMGASAPS 1121
+P PK G P P GP G GM + P E+G+ PG P G P
Sbjct: 940 -PGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPG----PQGV--PG 992
Query: 1122 RFLPAYHDDAAGRSDSSHAHPDFPRPGRAYGRRHMGGLS--PRSP 1164
LP A G + P PGR G + G+S P SP
Sbjct: 993 --LPG-EKGAKGEKGQAGL-PGIGIPGRP-GDKGEQGISGFPGSP 1032
Score = 79 (32.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 37/110 (33%), Positives = 47/110 (42%)
Query: 1197 GDP-IGNSFHDSRFPVLPSHLRRGEFEG-PGRTGDLIGQEFLPSHLRRGEP--LGPHNLR 1252
G P I S D P +P + G G GD Q F S G P GP+++
Sbjct: 1250 GSPGITGSKGDMGPPGVPGFQGQKGLPGLQGAKGDQGDQGFPGSKGLPGPPGPPGPYDIV 1309
Query: 1253 LGETVGLGGFPGPARMEELGGPGNFPPPRLGEPGFRSSFSRQGFPNDGGF 1302
G+ GL G GPA ++ L GP P P+ G+ G S G P GF
Sbjct: 1310 KGDP-GLPGPEGPAGLKGLPGP---PGPK-GQQGVTGSVGLPGPPGIPGF 1354
>UNIPROTKB|Q12933 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0070207 "protein homotrimerization"
evidence=IPI] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IDA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IDA] [GO:0042981 "regulation of
apoptotic process" evidence=IDA] [GO:0046625 "sphingolipid binding"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA;TAS] [GO:2001238 "positive regulation of extrinsic
apoptotic signaling pathway" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP;IDA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IPI]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=NAS] [GO:0006461 "protein complex assembly" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005174 "CD40 receptor binding" evidence=ISS]
[GO:0009898 "internal side of plasma membrane" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_578 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 EMBL:CH471090
Pathway_Interaction_DB:caspase_pathway GO:GO:0045087 GO:GO:0045121
GO:GO:0004871 GO:GO:0006919 GO:GO:0030163
Pathway_Interaction_DB:tnfpathway GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL355987 GO:GO:0070207
Pathway_Interaction_DB:ceramidepathway GO:GO:0033209 GO:GO:0004842
GO:GO:0007250 Pathway_Interaction_DB:hivnefpathway GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:0051865 GO:GO:2001238
Pathway_Interaction_DB:trail_pathway GO:GO:0043623
Pathway_Interaction_DB:p38_mkk3_6pathway SUPFAM:SSF49599
GO:GO:0050870 GO:GO:0035631 PDB:3M0A PDB:3M0D PDBsum:3M0A
PDBsum:3M0D GO:GO:0032743 GO:GO:0005174 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0034351 GO:GO:0046625 GO:GO:0002726
CleanEx:HS_TRAF2 PDB:1CA9 PDBsum:1CA9 PDB:1D0A PDBsum:1D0A PDB:1CZZ
PDB:1D00 PDBsum:1CZZ PDBsum:1D00 PDB:1D01 PDBsum:1D01 PDB:1D0J
PDBsum:1D0J PDB:1F3V PDBsum:1F3V eggNOG:NOG264247
HOGENOM:HOG000231558 HOVERGEN:HBG058222 EMBL:U12597 EMBL:AK054686
EMBL:AK289722 EMBL:AK298370 EMBL:BX538160 EMBL:AY623660
EMBL:AL449425 EMBL:BC032410 EMBL:BC033810 EMBL:BC043492
EMBL:BC064662 IPI:IPI00030278 IPI:IPI00292635 IPI:IPI00970911
IPI:IPI00970988 PIR:S56163 RefSeq:NP_066961.2 UniGene:Hs.522506
PDB:1CA4 PDB:1CZY PDB:1QSC PDB:3KNV PDB:3M06 PDBsum:1CA4
PDBsum:1CZY PDBsum:1QSC PDBsum:3KNV PDBsum:3M06
ProteinModelPortal:Q12933 SMR:Q12933 DIP:DIP-6223N IntAct:Q12933
MINT:MINT-107429 STRING:Q12933 PhosphoSite:Q12933 DMDM:23503103
PaxDb:Q12933 PRIDE:Q12933 DNASU:7186 Ensembl:ENST00000247668
Ensembl:ENST00000359662 Ensembl:ENST00000536468 GeneID:7186
KEGG:hsa:7186 UCSC:uc004cjv.3 UCSC:uc010nbw.3 UCSC:uc011mek.2
CTD:7186 GeneCards:GC09P139776 H-InvDB:HIX0169360 HGNC:HGNC:12032
HPA:CAB004603 HPA:HPA009972 HPA:HPA010634 MIM:601895
neXtProt:NX_Q12933 PharmGKB:PA164742666 InParanoid:Q12933 KO:K03173
OMA:PSDGCTW EvolutionaryTrace:Q12933 GenomeRNAi:7186 NextBio:28172
ArrayExpress:Q12933 Bgee:Q12933 Genevestigator:Q12933
GermOnline:ENSG00000127191 PANTHER:PTHR10131:SF21 Uniprot:Q12933
Length = 501
Score = 129 (50.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNT----TQACP 57
GF ++ +L + L +Y C CR ++ Q+QC H YC CL I+++ AC
Sbjct: 18 GF-SKTLLGTK-LEAKYLCSACRNVL--RRPFQAQCGHRYCSFCLASILSSGPQNCAACV 73
Query: 58 YDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTSHCSGCAF 114
++G + E S ++ES+ A + + V L GCTW+G L E S C
Sbjct: 74 HEG-IYEEGIS--ILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYES----CHE 126
Query: 115 GNSPVVCNRC-AIQIVHR--QVQEHAQN-CP 141
G P++ C A + + R + + H ++ CP
Sbjct: 127 GRCPLMLTECPACKGLVRLGEKERHLEHECP 157
Score = 43 (20.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 755 IENVEGQKDSANVDIKQEEHSVSKEVQEEPLLKTSTMQQGTQFGEQS 801
+E VEG+K Q+EH V + +L +S ++ G+QS
Sbjct: 224 LETVEGEK--------QQEHEVQWLREHLAMLLSSVLEAKPLLGDQS 262
>ZFIN|ZDB-GENE-030131-9441 [details] [associations]
symbol:rnf41l "ring finger protein 41, like"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-9441 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00530000063647 EMBL:BX511010 IPI:IPI00962244
RefSeq:XP_002664951.1 UniGene:Dr.124763 UniGene:Dr.79587
ProteinModelPortal:E9QJ18 Ensembl:ENSDART00000135860 GeneID:337495
KEGG:dre:337495 CTD:337495 NextBio:20812271 Bgee:E9QJ18
Uniprot:E9QJ18
Length = 292
Score = 116 (45.9 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 33/140 (23%), Positives = 57/140 (40%)
Query: 1 MGFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQACPYDG 60
MG+D E + + G C VCR ++ + LQ+ C H +C C+ + +CP D
Sbjct: 1 MGYDLERFVGYVN-EG-LLCCVCRDVL--EDPLQAPCEHAFCSTCIHGWLIHHNSCPEDR 56
Query: 61 YLVTEADSKPLVESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVV 120
+ +PL + + + ++ V C+F GC L H C +
Sbjct: 57 LPLDITHLRPLF---RYMRNDLARLQVRCVFRPQGCEVICALESIHRHEQQCDYALLNCT 113
Query: 121 CNRCAIQIVHRQVQEHAQNC 140
C +Q+ R ++ H C
Sbjct: 114 NTGCPVQVSRRSLEAHLCVC 133
Score = 45 (20.9 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 849 RPAAPSIFQAPPPGAVPQTQAP 870
RPA PS APPP + + +P
Sbjct: 254 RPATPSE-AAPPPAEMQRKPSP 274
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 752 EEVIENVEGQKDSANVDIKQEEHSVSKEVQE 782
EEV +E + DS + Q+E + EV E
Sbjct: 178 EEVRHEMESRLDSQRRHMVQKESLLRSEVDE 208
>UNIPROTKB|F1SLZ9 [details] [associations]
symbol:F1SLZ9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031386 "protein tag" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 EMBL:CU498845
Ensembl:ENSSSCT00000000411 Uniprot:F1SLZ9
Length = 288
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 29/106 (27%), Positives = 47/106 (44%)
Query: 37 CTHLYCKPCLTYIVNTTQACPYDGYLVTEADSKPLVESNKALAETIGKITVHCLFHRSGC 96
C H +C C+T + Q CP D +VT A +P+ + + + K+ + C GC
Sbjct: 5 CEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVP---RIMRNMLSKLQIACDNAVFGC 61
Query: 97 TWQGPLSECTSHCSGCAFG-NSPVVCNR-CAIQIVHRQVQEHAQNC 140
+ L SH S C PV C + C +++ ++ H NC
Sbjct: 62 SAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELPNH--NC 105
>UNIPROTKB|F1NIW0 [details] [associations]
symbol:F1NIW0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
GO:GO:0006397 GO:GO:0071013 GeneTree:ENSGT00670000097795
EMBL:AADN02066745 IPI:IPI01017388 Ensembl:ENSGALT00000041211
OMA:WCALRAR ArrayExpress:F1NIW0 Uniprot:F1NIW0
Length = 111
Score = 84 (34.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 24/73 (32%), Positives = 29/73 (39%)
Query: 837 PPSLYGSSTLQQRPAAPSIFQAPPPGAVPQTQAPTQ--FRPPMFKPEVPPG-GIPVSGPA 893
PP + G L RP P PPPG + P PP P++PP G+P P
Sbjct: 32 PPLMNG---LPPRPPLPDSMPPPPPGGMTLPPMPPSGPVPPPPVPPQLPPAPGVPPPAPL 88
Query: 894 ASFGRGP-GHNGP 905
R P GP
Sbjct: 89 PPMMRPPLPKEGP 101
Score = 40 (19.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 1273 GPGNFPPP 1280
GPG PPP
Sbjct: 100 GPGTIPPP 107
>UNIPROTKB|F1MJ71 [details] [associations]
symbol:COL4A4 "Collagen alpha-4(IV) chain" species:9913
"Bos taurus" [GO:0005605 "basal lamina" evidence=ISS] [GO:0005587
"collagen type IV" evidence=ISS] [GO:0005201 "extracellular matrix
structural constituent" evidence=ISS] [GO:0032836 "glomerular
basement membrane development" evidence=ISS] InterPro:IPR001442
Pfam:PF01413 PROSITE:PS51403 SMART:SM00111 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0005605 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 GO:GO:0032836 OMA:FRGDMGD
EMBL:DAAA02006104 EMBL:DAAA02006105 EMBL:DAAA02006106
EMBL:DAAA02006107 EMBL:DAAA02006108 EMBL:DAAA02006109
EMBL:DAAA02006110 EMBL:DAAA02006111 EMBL:DAAA02006112
IPI:IPI00824488 Ensembl:ENSBTAT00000018302 Uniprot:F1MJ71
Length = 1677
Score = 94 (38.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 36/93 (38%), Positives = 42/93 (45%)
Query: 1217 RRGEFEGPGRTGD--LIGQEFLPSHL----RRGEPLGPHNLRLGETVGLGGF-PG-PARM 1268
++GE PG +GD G+ H RRGEP G H G GF PG P R
Sbjct: 962 KKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEP-GSH--------GPPGFHPGEPGRN 1012
Query: 1269 EELGGPGNFPPPRLGEPGFRSSFSRQGFPNDGG 1301
+ G PG PP G PG R + GFP D G
Sbjct: 1013 GQPGLPG--PPGPPGSPGLRGNIGFPGFPGDQG 1043
Score = 90 (36.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 75/269 (27%), Positives = 96/269 (35%)
Query: 860 PPGAV--PQTQAPTQFRPPMFK--PEVP--PGGIPVSGPAASFGRGPGHNGPHQHSFESP 913
PPGA P P PP + P P PG V G A S PG+ GP
Sbjct: 381 PPGAPGRPGEACPGMTGPPGPRGFPGHPGFPGAAGVPGRADSAPGKPGNQGPTGLPGVPG 440
Query: 914 LVAPQGPYNLXXXXXXXXXXXXQRSV-PLS--GFDSHVGTMVGPAYGPGGPMDLKQPSNP 970
L P G + + V P G G+ A PG PM P P
Sbjct: 441 LPGPPGSDAVYCTVGQPGPQGTKGKVGPPGRRGSKGEKGSSGLCACQPG-PMGPSGPPGP 499
Query: 971 MEAEMFTGQR--PGYMDGRESDSHFPGSQQRSPLGPPSGT-RSNMMRMNGGPG----SEL 1023
+ G PG++ G + PG++ SP GPP S + G G S +
Sbjct: 500 PGRQGSKGDLGLPGWL-GEKGSPGPPGAKG-SP-GPPGKPGASGLPGSKGEKGDMVVSRV 556
Query: 1024 RDERFKSFPDGRLNPFPVDPARSVIDRGEFEEDLKQFSRPS-HLDAEPVPK--LGSHFLP 1080
+ + + PDG P + + R + + P H DA P K G P
Sbjct: 557 KGHKGERGPDG---PPGLPGQQGQHGRDGYAGEKGDTGPPGDHEDAAPGDKGPPGPPGPP 613
Query: 1081 SRPFDRGPHGYGMDMGPRPFERGLSYDPG 1109
R RGP G G GP P +RG PG
Sbjct: 614 GRAGPRGPPGLGFP-GP-PGDRGQPGAPG 640
>MGI|MGI:1932491 [details] [associations]
symbol:Prp2 "proline rich protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:1932491 GO:GO:0005576 InterPro:IPR026086 PANTHER:PTHR23203
UniGene:Mm.425348 UniGene:Mm.484054 CleanEx:MM_PRH1 EMBL:M23236
EMBL:M12100 EMBL:M19419 IPI:IPI00474263 IPI:IPI00855123 PIR:A28996
PIR:D29149 UniGene:Mm.333439 Genevestigator:P05143
GermOnline:ENSMUSG00000058295 Uniprot:P05143
Length = 317
Score = 102 (41.0 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 49/162 (30%), Positives = 57/162 (35%)
Query: 857 QAPPPGAVPQTQAPTQFRPPMFKPEVPP--GGIPVSGPAASFGRGPGH-NGPHQHSFESP 913
Q PPP A PQ + P Q PP P + P G P GP + + P GP + P
Sbjct: 162 QGPPPPAGPQPRPP-QGPPPPAGPHLRPTQGPPPTGGPQQRYPQSPPPPGGPQPRPPQGP 220
Query: 914 LVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAYGP---GGPMDLKQPSNP 970
P GP+ + P G G P GP GGP QP P
Sbjct: 221 -PPPGGPHP---RPTQGPPPTGPQPRPTQGPPPTGGPQQRPPQGPPPPGGP----QPRPP 272
Query: 971 MEAEMFTGQRPGYMDGRESDSHFPGSQQRSPL-----GPPSG 1007
TG +P G G QQ PL GPP G
Sbjct: 273 QGPPPPTGPQPRPTQGPHPTG---GPQQTPPLAGNPQGPPQG 311
Score = 64 (27.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 455 GAQSQMQNQFPQQTPSMRPAQSHATISNQPLS---TGLPPLGQVANIPPAQQLPVRPHAP 511
G + ++QNQ Q P+ RP S + P++ G PP G PP Q P P P
Sbjct: 18 GPREELQNQI--QIPNQRPPPSGSQ-PRPPVNGSQQGPPPPGGPQPRPP--QGPPPPGGP 72
Query: 512 QP 513
QP
Sbjct: 73 QP 74
>UNIPROTKB|G5EH07 [details] [associations]
symbol:MGCH7_ch7g400 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR016182 GO:GO:0005507
GO:GO:0008131 GO:GO:0048038 GO:GO:0009308 SUPFAM:SSF54416
Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 SMART:SM00671
EMBL:CM000230 EMBL:CM001237 RefSeq:XP_003721107.1
ProteinModelPortal:G5EH07 EnsemblFungi:MGG_02667T0 GeneID:2682798
KEGG:mgr:MGG_02667 Uniprot:G5EH07
Length = 1008
Score = 125 (49.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 117/460 (25%), Positives = 159/460 (34%)
Query: 859 PPPGAVPQTQAPTQFRPPMFKPEVPPGGIPVSGPAASFGRGPGHNGPHQHSFESPLVAPQ 918
P PG P P + RP M P GG+P GP G GPG GP + P+
Sbjct: 105 PGPGPGPMGPGPGRGRP-MQGPG-GRGGMPPRGPMPPRGGGPGP-GPGRGFHNGPVPGRG 161
Query: 919 G---PYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAYGPGGPMDLKQPSNPMEAEM 975
G P R LS + G PA+ PG + E
Sbjct: 162 GGPNPLQRSATADPFAGRGGARGPMLSPQEMGFGGAF-PAF-PGQRKRTEIDDENKILEK 219
Query: 976 FTGQRPGYMDGRESDSHFPGSQQRSPLGPPSGTRSNMMRMNGGPGSELRDERFKSFPDGR 1035
G G D+ P + + P+GPP G G P +R +P R
Sbjct: 220 MGGMAIQDRTGL-GDAPPPPANRGGPMGPP-GPNDGP---RGPPQRGFSQDR--GYPGQR 272
Query: 1036 LNPFPVDPARSVID-RGEFEEDLKQFSRPSHLDAEPVPKLGSHFLPSR----PFDRGPHG 1090
P + + D R EF + + P+ A P P+ G P R P+ GP G
Sbjct: 273 GPPGSDEGYGAPGDFRDEFGPPQRTMTMPNDPRAGPGPR-GPP--PGRAETAPYP-GP-G 327
Query: 1091 YGMDMGPRPFERGLSYD-PGLKLDPMGASAPSRFLPAYH---DDAAGRSDSSHAHPDFPR 1146
G GP P RG+ P G P R PA A R D + F
Sbjct: 328 PGPGPGPGPAGRGMGMGLPARPSTAQGMRGPPRGYPANGMPPPQAPLREDGQYQR-GFDD 386
Query: 1147 PGRAYGRRHMGGLSPRSPFREFCXXXXXXXXXXXXRSVREDIGGREFRRFGDPIGNSFHD 1206
P YG++ +S F +F + R D G E F S +
Sbjct: 387 PNDGYGQQAQRPVS----FDDFYDYYDNPPQQQQQQQPRND-GIAEIPDFN----RSANH 437
Query: 1207 SRFPVLPSHLRRGEFEGPGRTGDLIGQEFLPSHLRRGEP-LGPHNLRLGETVG-LGGFPG 1264
R + H+R+ + EGP G L Q L + + +P L + E VG + P
Sbjct: 438 LRNGSMDQHMRQ-QPEGPQERGGLGRQPDL--NRTKSQPDLRQPQAAVFEMVGDVPPIPN 494
Query: 1265 PARMEELGGPGNFPPPRLGEPGFRSSFSRQGFPN--DGGF 1302
+ G P N P P G G+ + QG+ D G+
Sbjct: 495 QYKPYPAGQP-NGPGPGPGPDGYGQGYD-QGYDQGYDQGY 532
Score = 53 (23.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 18/48 (37%), Positives = 19/48 (39%)
Query: 464 FPQQTPSMRPAQSHATISNQ-PLSTGLPPLGQVANIPPAQQLPVRPHA 510
+PQQ P PA Q P PP Q A PPAQ P A
Sbjct: 7 YPQQRPYNGPAAPRPPPQRQYPPGPNGPPGRQFAG-PPAQNYNSPPQA 53
>UNIPROTKB|A7XUJ6 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9823 "Sus scrofa" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0046849 "bone remodeling" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005938 GO:GO:0005634 GO:GO:0007165
GO:GO:0042981 GO:GO:0005811 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:EU095967
RefSeq:NP_001098756.1 UniGene:Ssc.96412 ProteinModelPortal:A7XUJ6
SMR:A7XUJ6 STRING:A7XUJ6 Ensembl:ENSSSCT00000014516
Ensembl:ENSSSCT00000033074 GeneID:396629 KEGG:ssc:396629
Uniprot:A7XUJ6
Length = 541
Score = 123 (48.4 bits), Expect = 0.00069, P = 0.00069
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 14 LAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTT-QACPYDGYLVTEADSKPLV 72
L +Y CP+C + + EA+Q+ C H +CK C+ + CP D ++ E L
Sbjct: 65 LESKYECPICLMAL--REAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE---NQLF 119
Query: 73 ESNKALAETIGKITVHCLFHRSGCTWQGPLSECTSHCSGCAFGNSPVVCNRCAIQIVHRQ 132
N A E + +TV C GC + L H + C F + + C +C Q
Sbjct: 120 PDNFAKREILS-LTVKC--PNVGCLHKMELRHLEDHQAHCEF--ALMNCPQCQRPFQKCQ 174
Query: 133 VQEHA-QNCP 141
+ H + CP
Sbjct: 175 LNIHILKECP 184
>RGD|1310457 [details] [associations]
symbol:Traf2 "Tnf receptor-associated factor 2" species:10116
"Rattus norvegicus" [GO:0002726 "positive regulation of T cell
cytokine production" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=ISO] [GO:0005174 "CD40 receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0006461 "protein complex assembly" evidence=IMP] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030163 "protein catabolic process" evidence=ISO]
[GO:0031435 "mitogen-activated protein kinase kinase kinase
binding" evidence=IPI] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0031996 "thioesterase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=ISO] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=ISO;IMP] [GO:0034351 "negative regulation of
glial cell apoptotic process" evidence=IMP] [GO:0035631 "CD40
receptor complex" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043234 "protein complex"
evidence=IMP;IDA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0043623 "cellular protein complex
assembly" evidence=ISO] [GO:0045121 "membrane raft" evidence=IDA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA;ISO]
[GO:0046625 "sphingolipid binding" evidence=ISO] [GO:0051023
"regulation of immunoglobulin secretion" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=ISO;IMP]
[GO:0051291 "protein heterooligomerization" evidence=IPI]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0070207 "protein homotrimerization" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISO] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=ISO] [GO:2001238 "positive regulation of extrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
RGD:1310457 Prosite:PS00518 GO:GO:0005938 GO:GO:0051291
GO:GO:0043234 GO:GO:0046872 GO:GO:0008270 GO:GO:0045121
GO:GO:0030163 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070207 GO:GO:0033209 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:2001238
GO:GO:0043623 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743
GO:GO:0051023 GO:GO:0090073 GO:GO:0043507 GO:GO:0034351
GO:GO:0046625 GO:GO:0002726 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF21 IPI:IPI00950063 ProteinModelPortal:E9PSP4
Ensembl:ENSRNOT00000008253 UCSC:RGD:1310457 ArrayExpress:E9PSP4
Uniprot:E9PSP4
Length = 504
Score = 122 (48.0 bits), Expect = 0.00080, P = 0.00080
Identities = 47/158 (29%), Positives = 69/158 (43%)
Query: 2 GFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVNTTQ------- 54
GF ++ +L + L +Y C CR ++ Q+QC H YC CLT I+
Sbjct: 18 GF-SKTLLGTR-LEAKYLCSACRNIL--RRPFQAQCGHRYCSFCLTSILRCAAVLGGSGP 73
Query: 55 ----ACPYDGYLVTEADSKPLVESNKALAETIGKITVHCL---FHRSGCTWQGPLSECTS 107
AC ++G L E S ++ES+ A + + V L GCTW+G L E S
Sbjct: 74 QNCAACVHEG-LYEEGIS--ILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYES 130
Query: 108 HCSGCAFGNSPVVCNRC-AIQ-IVHRQVQEH--AQNCP 141
C G P + C A + +V ++H Q CP
Sbjct: 131 ----CHEGLCPFLLTECPACKGLVRLSEKKHHTEQECP 164
>UNIPROTKB|F1NDF5 [details] [associations]
symbol:COL4A5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005587 "collagen type IV"
evidence=IEA] [GO:0005605 "basal lamina" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=IEA] InterPro:IPR001442
Pfam:PF01413 PROSITE:PS51403 SMART:SM00111 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0031594 GO:GO:0005605 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:MPMNMEP EMBL:AADN02013568
EMBL:AADN02013569 EMBL:AADN02013570 EMBL:AADN02013571
EMBL:AADN02013572 IPI:IPI00583230 Ensembl:ENSGALT00000013221
ArrayExpress:F1NDF5 Uniprot:F1NDF5
Length = 1658
Score = 94 (38.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 90/310 (29%), Positives = 108/310 (34%)
Query: 875 PPMFKPEVPPG--GIP-VSGPAASFGRGPGHNG-PHQHSFESPLVAPQGPYNLXXXXXXX 930
PP F P+ PG GI VSG G PG G P Q E + P GP
Sbjct: 589 PPGFGPQGSPGEKGIQGVSGRPGPPGV-PGPKGDPGQTITEPGVPGPPGPPGRNGDPGLP 647
Query: 931 XXXXXQRSVPLSGFDSHVGTMVGPAYG-PG--GPMDLKQPSNPMEAEMFTGQRPGYMDGR 987
LSG G P G PG GP P A G RPG +DG
Sbjct: 648 GDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPG-RPG-LDGP 705
Query: 988 ESDSHFPGSQ-QRS-----PLGPPS--GTRSNMMRMN--GGPGSELRDER--FKSFPDGR 1035
FPG + R P GPP G + G PG+ R F P +
Sbjct: 706 PGPPGFPGQKGDRGFGVPGPPGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPK 765
Query: 1036 LNPFPVDPARSVIDRGEFEEDLKQFSRPSHLDAE-PVPKLGSHFLPSRPFDRGPHGYGMD 1094
+P P P G + P PV G +P D GP G+ +
Sbjct: 766 GDPGPSGPPGLPGPPGI--PGIGGQGPPGPPGPPGPVGPPGLQGVPGEKGDPGPPGFDVP 823
Query: 1095 MGPRPFERGL-SYD--PGLKLDPMGASAP-SRF-LPAYHDDAAGRSDSSHAHPDFPRPGR 1149
GP P ++G Y PGL P G+ P R +P + A G A P P P
Sbjct: 824 -GP-PGDQGTPGYPGPPGLP-GPQGSPGPPGRDGIPGF-PGAKGEMGVMGA-PGPPGPPG 878
Query: 1150 AYGRRHMGGL 1159
GR + GL
Sbjct: 879 TPGRSGLPGL 888
Score = 80 (33.2 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 32/83 (38%), Positives = 39/83 (46%)
Query: 1224 PGRTGDLIGQEFLPSHL-RRGEPLGPHNLRLGETVGLGGFPGPARMEELGGPGNFPPPRL 1282
PG G G++ +P ++GEP P R G GL G G + ELG PG PP L
Sbjct: 1130 PGEKGQP-GRDGIPGPAGQKGEPGLPGFGRPGPP-GLPGLSG--QKGELGLPGPPGPPGL 1185
Query: 1283 ----GEPGFRSSFSRQGFPNDGG 1301
GEPGF+ QG P G
Sbjct: 1186 PGLKGEPGFQGFPGLQGPPGPPG 1208
Score = 56 (24.8 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 27/78 (34%), Positives = 31/78 (39%)
Query: 837 PPSLYGSS--TLQQRPAAPSI----FQAPPPGAVPQTQAPTQFRPPMFKPEVPPGGI-PV 889
PP L GS T P P + Q PG +P P Q P + P+ PPG P
Sbjct: 348 PPGLPGSPGITTVGPPGPPGLPGERGQKGDPG-LPGVSIPGQ--PGLDGPQGPPGPPGPP 404
Query: 890 SGPAASFGRGPG--HNGP 905
PA S G G GP
Sbjct: 405 GPPAPSVPPGEGLCERGP 422
>RGD|628797 [details] [associations]
symbol:Prpmp5 "proline-rich protein MP5" species:10116 "Rattus
norvegicus" [GO:0005576 "extracellular region" evidence=IEA]
RGD:628797 GO:GO:0005576 InterPro:IPR026086 PANTHER:PTHR23203
CTD:5542 KO:K13911 EMBL:L17318 EMBL:M11899 IPI:IPI00187926
PIR:B48013 RefSeq:NP_742062.1 UniGene:Rn.29950 GeneID:257651
KEGG:rno:257651 UCSC:RGD:628797 NextBio:624204
Genevestigator:P10165 Uniprot:P10165
Length = 295
Score = 121 (47.7 bits), Expect = 0.0010, Sum P(3) = 0.00099
Identities = 51/164 (31%), Positives = 58/164 (35%)
Query: 848 QRPAAPSIFQAPPPGAVPQTQAPTQFRPPMFKPEVPP------GGIPVSGPAASFGRGPG 901
QRP P Q PPP PQ Q P Q PP P+ PP G P GP +GP
Sbjct: 107 QRPPQPGSPQGPPPPGGPQ-QRPPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPPQGPP 165
Query: 902 HNGPHQHSFESPLVAPQGPYNLXXXXXXXXXXXXQRSVPLSGFDSHVGTMVGPAYGPGGP 961
G Q P +PQGP + P G+ GP PGGP
Sbjct: 166 PQGGPQRP-PQP-GSPQGPPPPGGPQQRAPQGPPPQGGPQR--PPQPGSPQGPP-PPGGP 220
Query: 962 MDLKQPSNPMEAEMFTGQRPGYMDGRESDSHFPGSQQRSPLGPP 1005
P + +PG G G QQR P GPP
Sbjct: 221 QQRPPQGPPPQGGPQRPPQPGSPQGPPPPG---GPQQRPPQGPP 261
Score = 41 (19.5 bits), Expect = 0.0010, Sum P(3) = 0.00099
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 1264 GPARMEELGGPGNFPPPRLGEPGFRSSFSRQGFPNDGG 1301
GP + G P P R +PG + QG P GG
Sbjct: 251 GPQQRPPQGPPPQGGPQRPPQPG-----NPQGPPQQGG 283
Score = 37 (18.1 bits), Expect = 0.0010, Sum P(3) = 0.00099
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 466 QQTPSMRPAQSHATISNQPLSTGLPP 491
QQ + +Q H +P GLPP
Sbjct: 30 QQLELEQQSQGHGQHHPKPPPGGLPP 55
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1392 1074 0.00085 123 3 11 23 0.46 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 73
No. of states in DFA: 618 (66 KB)
Total size of DFA: 484 KB (2222 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 117.49u 0.11s 117.60t Elapsed: 00:00:05
Total cpu time: 117.51u 0.11s 117.62t Elapsed: 00:00:05
Start: Tue May 21 23:37:52 2013 End: Tue May 21 23:37:57 2013