Your job contains 1 sequence.
>000611
MSTFFFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRS
YHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKV
SPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLS
AVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNL
RRQISSSNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLW
AGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPL
PCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQR
ISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRA
RCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRK
DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA
EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL
DEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTEL
EKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLG
FDFHEISELQNACSTLHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIH
GVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQ
VHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVG
DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQ
CLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELLSDSEFFCR
GIEAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVFDRQ
SNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNR
IGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYD
EKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKT
PSPKHTNSRKKLRKAEPGLAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRRAAKKRTVL
DSLCPFIYTQQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000611
(1391 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 2122 1.3e-267 3
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 464 1.3e-52 4
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 450 7.4e-51 4
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 451 1.1e-50 4
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 442 3.1e-50 3
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 439 1.1e-49 3
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 447 2.7e-49 3
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 452 3.6e-49 3
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 452 3.7e-49 3
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 452 3.7e-49 3
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 450 1.0e-48 3
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 453 1.3e-48 3
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 453 3.4e-48 3
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 461 3.8e-48 3
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 441 3.9e-48 3
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 441 4.8e-48 3
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 428 5.2e-48 4
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 429 5.2e-48 4
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 433 5.8e-48 3
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 428 6.5e-48 4
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 431 1.0e-47 4
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 431 2.3e-47 3
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 448 4.3e-47 3
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 431 3.6e-46 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 432 7.8e-46 3
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 428 1.0e-45 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 428 1.0e-45 2
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 419 1.4e-45 3
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 431 1.1e-44 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 431 1.4e-43 4
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 477 1.2e-41 2
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 477 1.3e-41 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 472 2.1e-41 2
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 472 2.1e-41 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 469 1.2e-40 2
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 411 1.4e-40 3
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 468 2.3e-40 3
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 468 2.3e-40 3
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 468 2.6e-40 3
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 465 5.1e-40 2
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 441 8.0e-40 2
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 374 4.1e-35 5
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 374 4.1e-35 5
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 422 1.6e-34 2
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 334 2.2e-34 4
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 334 2.1e-33 3
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 405 6.3e-32 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 374 6.9e-30 3
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 379 1.3e-29 2
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 354 2.0e-28 1
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 310 7.1e-23 2
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 303 1.7e-21 2
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 267 4.1e-19 1
POMBASE|SPAC343.11c - symbol:msc1 "multi-copy suppressor ... 164 2.1e-18 4
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 240 3.5e-16 1
POMBASE|SPBP19A11.06 - symbol:lid2 "Lid2 complex subunit,... 166 3.4e-15 4
CGD|CAL0001611 - symbol:orf19.2476 species:5476 "Candida ... 130 2.9e-12 3
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 200 3.7e-12 1
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 193 1.0e-10 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 194 1.7e-10 3
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 193 2.6e-10 2
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 172 2.0e-09 2
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 183 2.6e-09 2
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 193 2.8e-09 2
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 183 3.3e-09 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 176 5.1e-09 1
UNIPROTKB|F5GYH2 - symbol:KDM4C "Lysine-specific demethyl... 183 5.2e-09 2
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 183 5.4e-09 2
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 186 9.8e-09 2
UNIPROTKB|E7EV17 - symbol:KDM4C "Lysine-specific demethyl... 183 1.1e-08 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 183 1.4e-08 2
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 183 1.7e-08 2
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 180 2.0e-08 2
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 183 2.2e-08 2
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 182 3.1e-08 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 169 3.1e-08 1
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 168 4.1e-08 1
SGD|S000004788 - symbol:ECM5 "Non-essential protein of un... 123 4.7e-08 3
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 167 5.2e-08 1
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 160 7.9e-08 1
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 165 8.6e-08 1
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 173 1.0e-07 2
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 164 1.1e-07 1
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 164 1.1e-07 1
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 175 1.7e-07 2
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 175 1.8e-07 2
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 181 1.9e-07 3
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 174 2.0e-07 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 183 2.1e-07 2
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 159 2.1e-07 2
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 175 2.1e-07 2
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 181 2.4e-07 3
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 181 2.4e-07 3
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 174 2.6e-07 2
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 158 4.7e-07 1
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 158 4.7e-07 1
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 161 4.8e-07 1
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 175 1.2e-06 3
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 175 1.5e-06 3
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 174 1.6e-06 3
WARNING: Descriptions of 37 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 2122 (752.0 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 425/865 (49%), Positives = 601/865 (69%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F +VMR +LPDLFDAQPDLLFQLVTML+P+VL EN VPVY+VLQEPGNFVITFP+S+HAG
Sbjct: 110 FEKVMRKTLPDLFDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAG 169
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDL-DSKVSPY 123
FNFGLNCAEAVNFA ADWLP+GG GA+LY+ Y K +V+SHEELLCVVAK + +++ S +
Sbjct: 170 FNFGLNCAEAVNFATADWLPYGGSGAELYRLYRKPSVISHEELLCVVAKGNCCNNEGSIH 229
Query: 124 LKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVA 183
LK+ELLR+Y+KE+ WRE+LW+ GI++S+PM +C + VG EEDPTCIIC+Q+L+LSA+
Sbjct: 230 LKKELLRIYSKEKTWREQLWKSGILRSSPMFVPECADSVGIEEDPTCIICQQFLHLSAIV 289
Query: 184 CRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQ 243
C CRP+ F CLEHW+HLCEC+ KL L YR+TLAEL + V++ +R
Sbjct: 290 CNCRPSVFACLEHWKHLCECEPTKLRLEYRYTLAELDMMVQEVEKFGGCKTQETKISQRP 349
Query: 244 ISSSNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGF 303
S + R L KK +G++V+ ++ ++WL + KVL FSS Y TLL+E+EQFLWAG
Sbjct: 350 SSGTKRSIALNKKQEGMQVSQARPADKWLLRASKVLDAAFSSVEYATLLKESEQFLWAGS 409
Query: 304 EMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCN 363
EMD VRD+ L + + WAE + DCL K E + DS KV L+ ++ELL +P+PC
Sbjct: 410 EMDRVRDVTKSLNKAKIWAEAVSDCLSKVEGEVN---DDSMKVHLEFIDELLRVNPVPCF 466
Query: 364 EPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISS 423
G+L L++YAEEAR L ++I++ALS+ I++LELL+S S PI + + E LS++ISS
Sbjct: 467 NSGYLKLKDYAEEARKLSEKIDSALSSSPTITQLELLHSEVSRSPISLKKHEILSKKISS 526
Query: 424 AKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCS 483
AK+ ++ +++ P IE+D L+KL SE L+L + +PET+ +L ++ ++ES R + +
Sbjct: 527 AKMLAKRAKRYLTDAKPPGIEMDALFKLNSEMLELHVQLPETEGILDLVKKSESARDKSN 586
Query: 484 EALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQH 543
+ L GS+SL+ VE LL E F++N+PEL +L+QYH D + WI+R ND++V++ KDQ
Sbjct: 587 KVLTGSLSLENVEELLHEFDSFSINVPELNILRQYHVDTLSWISRFNDVMVDVREGKDQR 646
Query: 544 NVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAV 603
+I +L+ +L++GASL IQV+ LPLVEVELKKA CREKA + LDFI Q+ +EAV
Sbjct: 647 KLISDLSSLLRDGASLGIQVEGLPLVEVELKKASCREKARTVYTARKSLDFIEQLLSEAV 706
Query: 604 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEV 663
IL IE E++F+++SG+L+ A WEERA+ IL ++ QM E +D++R S +I VLP+L +
Sbjct: 707 ILHIEEEEIFVEISGILSTARCWEERASTILENETQMYELKDLVRMSVNIDAVLPTLQGI 766
Query: 664 QNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKV 723
+N IS+A++WL+ SE FL++ ++A + CS+L L LKDLV+Q+K L + L+E LE +
Sbjct: 767 ENTISSAETWLQKSEPFLSATSSMASSPCSMLELPVLKDLVTQAKLLNVQLQEPRILETL 826
Query: 724 INNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDF 783
+ NCERWQ LLQ+ LLD I DG ++++ KI LIT ++SA GL+LG +F
Sbjct: 827 LLNCERWQCDNHQLLQETEDLLDNAKIDDGTHSNILPKIMDLITRVDSARRSGLALGLNF 886
Query: 784 HEISELQNACSTLHWCKKALSFLSVSPS---LEDV--ESLMAVA----EGLSTRCFSS-- 832
E+ +L+ A L WC K ++ S SP+ LEDV SL + EG +
Sbjct: 887 DELPKLRTASLKLGWCCKTITLSSSSPTSELLEDVGKPSLQHIQQHLKEGQTLEILPEEY 946
Query: 833 MLWNSLIH----GVKWLKRALEVIS 853
L L+ G++W KRA +V++
Sbjct: 947 YLGKRLMELKDTGLEWAKRARKVVT 971
Score = 449 (163.1 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 91/172 (52%), Positives = 122/172 (70%)
Query: 1159 SKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQK-LMELNRIGSQWADVAKKVVLDSG 1217
S+LLE + KP++ IQ +LKEG + I P+++Y K LMEL G +WA A+KVV DSG
Sbjct: 915 SELLEDVGKPSLQHIQQHLKEGQTLEILPEEYYLGKRLMELKDTGLEWAKRARKVVTDSG 974
Query: 1218 ALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHID 1277
AL+L+ VFELI+EGENLPV+ E+EL+SLRARSML+CIC KPY+ ++M++C QC EWYH
Sbjct: 975 ALALEDVFELISEGENLPVHAEQELQSLRARSMLHCICLKPYNSRSMVSCSQCGEWYHTY 1034
Query: 1278 CVKLLSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSR 1329
C+KL P+ Y+C+AC P AE +TPQ +D R EP+ PS +R
Sbjct: 1035 CLKLHWRPKAYVCSACCPLAE--TTPQ-IDPARAT----EPERPSLNQRRTR 1079
Score = 68 (29.0 bits), Expect = 2.3e-227, Sum P(3) = 2.3e-227
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 935 EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHG--SVSM 992
++++ D W +R +++V T G +L + + I + + ++ + + SM
Sbjct: 950 KRLMELKDTGLEWAKRARKVV-TDSGAL-ALEDVFELISEGENLPVHAEQELQSLRARSM 1007
Query: 993 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C+C + + + CS C + YH CL+ +AY+C C
Sbjct: 1008 LHCICLKPYNSR-SMVSCSQCGEWYHTYCLKL----HWRPKAYVCSAC 1050
Score = 61 (26.5 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 52/291 (17%), Positives = 117/291 (40%)
Query: 696 RLESLKDLVSQSK-FLKISLKEQTELEKVIN-NCERWQNHASSLLQDARCLLD---KDDI 750
++ S K L ++K +L + E++ + N E + H L + +LD K +
Sbjct: 523 KISSAKMLAKRAKRYLTDAKPPGIEMDALFKLNSEMLELHVQ--LPETEGILDLVKKSES 580
Query: 751 GDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISEL-QNACSTLHWCKKALSFLSVS 809
SN +++ L ++E + S + E++ L Q TL W + F V
Sbjct: 581 ARDKSNKVLTGSLSL-ENVEELLHEFDSFSINVPELNILRQYHVDTLSWISR---FNDVM 636
Query: 810 PSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFK-------RCK 862
+ + + + LS+ + G+ ++ +E+ A C+ K R
Sbjct: 637 VDVREGKDQRKLISDLSSLLRDGASLGIQVEGLPLVE--VELKKASCREKARTVYTARKS 694
Query: 863 LSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKE 922
L +E++L+ ++ + E++ + + W+E+ ++ + M +LK+
Sbjct: 695 LDFIEQLLSEAVILHIEEEEIFVEISGILSTARCWEERASTIL------ENETQMYELKD 748
Query: 923 LGEAAA-FDC--PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 970
L + D P L+ + + + E W Q+ + + + +S +L+
Sbjct: 749 LVRMSVNIDAVLPTLQGIENTISSAETWLQKSEPFLSATSSMASSPCSMLE 799
Score = 46 (21.3 bits), Expect = 4.8e-225, Sum P(3) = 4.8e-225
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 796 LHWCKKALSFLSVSPSL--EDVESLMAVAEGLSTRC---FSSMLWNSLIH 840
L W K+A ++ S +L EDV L++ E L S+ S++H
Sbjct: 960 LEWAKRARKVVTDSGALALEDVFELISEGENLPVHAEQELQSLRARSMLH 1009
Score = 45 (20.9 bits), Expect = 7.1e-37, Sum P(3) = 7.1e-37
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 843 KWLKRALEVISAPCKFKRCK--LSDVEEVL-AGCKGINFSFPVVIGELTSAIQKHKLWQE 899
KWL RA +V+ A L + E+ L AG + + ++T ++ K K+W E
Sbjct: 376 KWLLRASKVLDAAFSSVEYATLLKESEQFLWAGSEMDR------VRDVTKSLNKAKIWAE 429
Query: 900 QV 901
V
Sbjct: 430 AV 431
Score = 44 (20.5 bits), Expect = 1.3e-267, Sum P(3) = 1.3e-267
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1357 SGIDNLWWHNRKPFRRAAKKRTVLDSLCPFIYT 1389
+ +++L W RK +R K+ + L P+ +T
Sbjct: 1085 AAVNDLKWKTRKHIKRTTKRSPQVHIL-PWFFT 1116
Score = 42 (19.8 bits), Expect = 9.5e-222, Sum P(2) = 9.5e-222
Identities = 11/61 (18%), Positives = 22/61 (36%)
Query: 793 CSTLHW------CKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLK 846
C LHW C +P ++ + L+ R + ++ ++ +KW
Sbjct: 1035 CLKLHWRPKAYVCSACCPLAETTPQIDPARATEPERPSLNQRRTRMVATDAAVNDLKWKT 1094
Query: 847 R 847
R
Sbjct: 1095 R 1095
Score = 37 (18.1 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 886 ELTSAIQKHKLWQEQV 901
EL K K W+EQ+
Sbjct: 233 ELLRIYSKEKTWREQL 248
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 464 (168.4 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 93/218 (42%), Positives = 138/218 (63%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF++QPDLL QLVT++NP++L+E+GVP+Y Q G FVITFPR+YH+GFN
Sbjct: 501 VMKGLAPELFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQ 560
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLC-VVAKSD-LDSKVSPYLK 125
G N AEAVNF ADWLP G + Y+ ++ V SH+E+ C + AK+D L+ +++ ++
Sbjct: 561 GFNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCVFSHDEMACNIAAKADSLELELACAVQ 620
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + +E++ RE+ ++ G+ S + P+ E+ C CR YLSA+ C
Sbjct: 621 KDMNAMIQEEKILREKAYKLGMWHSQQVDYDILPD-----EERQCAKCRTTCYLSAITCP 675
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF 223
C P VCL H + LC C R L Y++TLAEL F
Sbjct: 676 CSPEQVVCLHHTQDLCSCPARNYTLNYKYTLAELKTFF 713
Score = 158 (60.7 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 82/343 (23%), Positives = 148/343 (43%)
Query: 415 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM--- 471
+ L+ R S W V K + +++ L L +EA + K+ PETD+L M
Sbjct: 714 QALTARAESYDDWASKVNKILKADQDNKSDLEELRCLLAEA-EKKM-YPETDLLNDMRQV 771
Query: 472 IGQAESCRARCSEALRGSMSLK--------TVELLLQELGDFTVNMPELEL-LKQYHSDA 522
I A+ C + L G + +L ++EL F + +L ++Q A
Sbjct: 772 IQNADRCTIMAQQLLNGKRQTRYRSGGGKSQNQLTVEELRAFINKLYDLPCTIRQ----A 827
Query: 523 IFWIARLNDI----LVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 578
F A LN + + + + L +L EGA L +++ L ++ L++A
Sbjct: 828 PFLKALLNRVEQFQQQSFDMLAEDMAGSSALQGLLDEGAGLDVELPQLAVLRQRLEQARW 887
Query: 579 REKALKACD--TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 634
E +A D + LD +R++ + V L E+ L +L WEE+A ++L
Sbjct: 888 VEAVQEASDQPADLSLDCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNML 947
Query: 635 IHKAQMC--EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 692
+ + E I I LPS ++++ +S A+ W+ ++ A P
Sbjct: 948 TARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRAREWIMEADALQAGGRI--PG-- 1003
Query: 693 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 735
L +L +LVS++K + + L+ T LE +I+ + W+ A+
Sbjct: 1004 ----LVTLSELVSRAKGIPVMLEALTRLESLISEVQAWKESAA 1042
Score = 124 (48.7 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 65/277 (23%), Positives = 123/277 (44%)
Query: 786 ISELQNACSTLHWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHGV 842
+ EL C HW +KA + L+ P S+E +E+ + + + S + L + +
Sbjct: 929 LQELLTVCE--HWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRAR 986
Query: 843 KWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT---SAIQKHKLWQE 899
+W+ A + + A + L + E+++ KGI PV++ LT S I + + W+E
Sbjct: 987 EWIMEA-DALQAGGRIPG--LVTLSELVSRAKGI----PVMLEALTRLESLISEVQAWKE 1039
Query: 900 QVHQFFNLKCAQQSWSLMLQLK-ELGEAAAFDCPELEKVL--SKVD-KVENWKQRCKEIV 955
+ F L+ + S +L + E G + E ++ K D K+++ ++++
Sbjct: 1040 SAAKTFLLRNSSLSLLEVLCPRCETGSQKSKSKKAKEGLVPCKKADVKLDSLFD-VEKVL 1098
Query: 956 GTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGS--------VSMTLCMCCESDSKELEF 1007
TS D S + L + Q SL + + S ++ T+C+C + +
Sbjct: 1099 STSK-DTASAMATLSDVHQKELDSLSMLRTSNESKFQSSPSCLAPTVCLCHTVPAGPM-- 1155
Query: 1008 LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1044
L C C+D YH C+ P D + ++CP C+ E
Sbjct: 1156 LQCELCRDAYHSGCV-PGFKDIQIGQPWLCPLCKRSE 1191
Score = 102 (41.0 bits), Expect = 8.4e-47, Sum P(4) = 8.4e-47
Identities = 89/420 (21%), Positives = 170/420 (40%)
Query: 291 LLREAEQFLWAGFEMDAVRDMVNKL-------IEGRRWAEGIRDCLHKAENWSSLPGSDS 343
LL EAE+ ++ E D + DM + I ++ G R +++ S
Sbjct: 750 LLAEAEKKMYP--ETDLLNDMRQVIQNADRCTIMAQQLLNGKRQTRYRSGGGKSQNQLTV 807
Query: 344 EKVRLDCVNELLGFDPLPCN---EPGHLILQNYAEEARSLIQEINAALSACSKISELELL 400
E++R +N+L +D LPC P L N E+ + Q + + S L+ L
Sbjct: 808 EELRA-FINKL--YD-LPCTIRQAPFLKALLNRVEQFQQ--QSFDMLAEDMAGSSALQGL 861
Query: 401 YSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKI 460
+GL + + + L QR+ A+ W ++V++ S++ PA + +D + +L + + L
Sbjct: 862 LDEGAGLDVELPQLAVLRQRLEQAR-WVEAVQEA-SDQ-PADLSLDCMRRLIDQGVGLAP 918
Query: 461 DV-PETDM--LLKMIGQAESCRARCSEAL--RGSMSLKTVELLLQELGDFTVNMPELELL 515
E M L +++ E + L R S++T+E + E+ +P L
Sbjct: 919 HACVERTMARLQELLTVCEHWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQL 978
Query: 516 KQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKK 575
K S A WI D L GR + EL + + + ++ L +E + +
Sbjct: 979 KDCVSRAREWIMEA-DAL-QAGGRIPGLVTLSEL---VSRAKGIPVMLEALTRLESLISE 1033
Query: 576 AHC-REKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL 634
+E A K + + +V ++ K G++ + AD+
Sbjct: 1034 VQAWKESAAKTFLLRNSSLSLLEVLCPRCETGSQKSKSKKAKEGLVPC------KKADVK 1087
Query: 635 IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLK--NSELFLASAFAVAPASC 692
+ + + E ++ S+D + +L +V + + S L+ N F +S +AP C
Sbjct: 1088 LDS--LFDVEKVLSTSKDTASAMATLSDVHQKELDSLSMLRTSNESKFQSSPSCLAPTVC 1145
Score = 69 (29.3 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 932 PELEKVLSKVDKVENWKQRC-KEIVGTSVGDKNSLLGLLQKIKQSVHRSLYI-YNKPHGS 989
PE++K K++K N K+R KEI DK + +K S SL N
Sbjct: 1368 PEIKKEHEKLEK--NSKRRLEKEITEGQYRDK-----IKKKRTTSPSNSLSDPSNSDDSE 1420
Query: 990 VSMTLCM---CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
++C C + + E+ ++ C +C +H C+ ++ E YIC C
Sbjct: 1421 EDWSVCSAKRCQQPEGNEVNWVQCDGSCNQWFHQVCVG-VSAEQAENEDYICVSC 1474
Score = 64 (27.6 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 48/234 (20%), Positives = 96/234 (41%)
Query: 525 WIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDL--PLVEVELKKAHCREKA 582
W +++N IL +D + ++EL C+L E DL + +V C A
Sbjct: 726 WASKVNKIL---KADQDNKSDLEELRCLLAEAEKKMYPETDLLNDMRQVIQNADRCTIMA 782
Query: 583 LKACDTKMPLDFIRQVTAEAVILQIEREKLFID--------------LSGVLAAAMRWEE 628
+ + K + L +E + FI+ L +L ++++
Sbjct: 783 QQLLNGKRQTRYRSGGGKSQNQLTVEELRAFINKLYDLPCTIRQAPFLKALLNRVEQFQQ 842
Query: 629 RAADILIHK-AQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAV 687
++ D+L A + ++ + V LP L ++ + A+ W++ + AS
Sbjct: 843 QSFDMLAEDMAGSSALQGLLDEGAGLDVELPQLAVLRQRLEQAR-WVEAVQE--ASD--- 896
Query: 688 APASCSLLRLESLKDLVSQSKFLKI-SLKEQT--ELEKVINNCERWQNHASSLL 738
PA SL + ++ L+ Q L + E+T L++++ CE W+ A ++L
Sbjct: 897 QPADLSL---DCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNML 947
Score = 63 (27.2 bits), Expect = 5.5e-52, Sum P(4) = 5.5e-52
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1255 CRKPY-DEKAMIACY-QCDEWYHIDCVKLLSAP---EIYICAAC 1293
C++P +E + C C++W+H CV + + E YIC +C
Sbjct: 1431 CQQPEGNEVNWVQCDGSCNQWFHQVCVGVSAEQAENEDYICVSC 1474
Score = 57 (25.1 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAPEIYICAACK 1294
C+C M+ C C + YH CV K + + ++C CK
Sbjct: 1145 CLCHT-VPAGPMLQCELCRDAYHSGCVPGFKDIQIGQPWLCPLCK 1188
Score = 54 (24.1 bits), Expect = 7.1e-40, Sum P(4) = 7.1e-40
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 1173 IQNYLKEGLLMNIS-PK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAE 1230
+Q L EG +++ P+ RQ+L + ++W + ++ LSLD + LI +
Sbjct: 858 LQGLLDEGAGLDVELPQLAVLRQRLEQ-----ARWVEAVQEASDQPADLSLDCMRRLIDQ 912
Query: 1231 GENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1263
G L + E R + +L +C ++EKA
Sbjct: 913 GVGLAPHACVERTMARLQELL-TVCEH-WEEKA 943
Score = 52 (23.4 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 756
L+ + L++ + +++ L E L VI RWQ+ + K I L +
Sbjct: 1195 LDKVLPLLASLQRIRVRLPEGDALRYVIERTVRWQHKVQQVSLPTLHPNGKVRI---LCS 1251
Query: 757 SLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLED-- 814
++ S + Q I SM++ G F L+ + S+ + + + +S LE+
Sbjct: 1252 NINSSMFQFIYSMQARHISG------FTSSQTLEGSNSSFYMLQPCIPLSELSAELEELL 1305
Query: 815 VESLM 819
VE L+
Sbjct: 1306 VEGLL 1310
Score = 49 (22.3 bits), Expect = 6.1e-42, Sum P(4) = 6.1e-42
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEK--ELKSLRARS 1249
+L EL + W + A ++ S++ + I E +++P YL +LK +R+
Sbjct: 928 RLQELLTVCEHWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRA 985
Score = 40 (19.1 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 1311 TNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIANNSSVFD 1354
++ LE P + + + K +KA+ GL A S+FD
Sbjct: 1050 SSLSLLEVLCPRCETGSQKSKSKKAKEGLVPCKKADVKLDSLFD 1093
Score = 39 (18.8 bits), Expect = 7.1e-40, Sum P(4) = 7.1e-40
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 941 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQK 971
+++VE ++Q+ +++ + ++L GLL +
Sbjct: 834 LNRVEQFQQQSFDMLAEDMAGSSALQGLLDE 864
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 450 (163.5 bits), Expect = 7.4e-51, Sum P(4) = 7.4e-51
Identities = 91/217 (41%), Positives = 134/217 (61%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 533 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 592
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 593 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 652
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C
Sbjct: 653 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCS 707
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K L YR+TL +LY +
Sbjct: 708 CKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 744
Score = 121 (47.7 bits), Expect = 7.4e-51, Sum P(4) = 7.4e-51
Identities = 69/337 (20%), Positives = 142/337 (42%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 748 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 805
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
AE C + + L G + + TVN + + Y + L D+
Sbjct: 806 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 865
Query: 533 LVNINGRKDQHN--VIDE-------LNCILKEGASLRIQVDDLPLVEVELKKAHCREKAL 583
L + + QH+ ++ E L +L +++ L + + L++A E+
Sbjct: 866 LNRVEDFQ-QHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQ 924
Query: 584 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 639
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 925 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 984
Query: 640 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 697
+ ++ ++I LP+ +++ + A+ WL++ E A P L
Sbjct: 985 HSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRV--PV------L 1036
Query: 698 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 734
++L +LV++ + + + L LE ++ + W+ A
Sbjct: 1037 DTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECA 1073
Score = 84 (34.6 bits), Expect = 7.4e-51, Sum P(4) = 7.4e-51
Identities = 26/133 (19%), Positives = 59/133 (44%)
Query: 917 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 976
+L LK P +K +K++ + + ++ E T+ + LG + +
Sbjct: 1098 LLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETA--SAMATLGEARLREMEA 1155
Query: 977 HRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNH 1031
+SL + N+ P V + +C+C ++ + + + C C+D +H C+ + +
Sbjct: 1156 LQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPM--IQCELCRDAFHTSCVAVPSISQG- 1212
Query: 1032 AEAYICPYCQYFE 1044
++CP+C+ E
Sbjct: 1213 LRIWLCPHCRRSE 1225
Score = 80 (33.2 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 701
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 889 ELQDLLDVSFEFDVELPQLAEMRIRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 942
Query: 702 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
DL V + + + K L++++ E W + A SLL+
Sbjct: 943 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 980
Score = 73 (30.8 bits), Expect = 7.4e-51, Sum P(4) = 7.4e-51
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 1219 LSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIACY-QCD 1271
L ++ +EL+ AE +LP Y E+E C +P DE + C C+
Sbjct: 1451 LERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCN 1510
Query: 1272 EWYHIDCVKL---LSAPEIYICAAC 1293
+W+H CV + ++ E YIC C
Sbjct: 1511 QWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 71 (30.1 bits), Expect = 6.3e-47, Sum P(3) = 6.3e-47
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 1174 QNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1233
Q LKE L N K + L +L R ++ + A + G L ++ L ++
Sbjct: 1105 QRKLKEPL-PNGKKKSTKLESLSDLERALTESKETASAMAT-LGEARLREMEAL----QS 1158
Query: 1234 LPVYLEKELKS-LRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYI 1289
L + E +L S L+ + C+C+K MI C C + +H CV + S + I++
Sbjct: 1159 LRLANEGKLLSPLQDVDIKICLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGLRIWL 1217
Query: 1290 CAACK 1294
C C+
Sbjct: 1218 CPHCR 1222
Score = 71 (30.1 bits), Expect = 1.0e-43, Sum P(4) = 1.0e-43
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1229 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGL 1286
Score = 65 (27.9 bits), Expect = 4.7e-45, Sum P(4) = 4.7e-45
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P L++ + AR +Q++ L A ++ L+ L +R +P+ +
Sbjct: 998 EEIPAYLPNGAALKDSVQRARDWLQDVEG-LQAGGRVPVLDTLIELVTRGRSIPVHLNSL 1056
Query: 415 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 448
+L ++ + W++ +V ++ P ++ ++VL
Sbjct: 1057 PRLETLVAEVQAWKECAVNTFLTENSPYSL-LEVL 1090
Score = 63 (27.2 bits), Expect = 7.6e-45, Sum P(4) = 7.6e-45
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 839 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSF 898
Query: 454 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQ---ELGDFTVNM 509
E D+++ + E + L+ E + C + S++L + L+ L ++
Sbjct: 899 E-FDVELPQLAEMRIRLEQARWLEEVQQACLDP--SSLTLDDMRRLIDLGVGLAPYSAVE 955
Query: 510 PELELLKQYHSDAIFWIARLNDILV-----NINGRKDQHNVIDELNCILKEGASLRIQV 563
+ L++ + + W + +L ++N I+E+ L GA+L+ V
Sbjct: 956 KAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSV 1014
Score = 63 (27.2 bits), Expect = 3.2e-39, Sum P(3) = 3.2e-39
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1212
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 919 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 978
Query: 1213 VLDSGALSLDKVFELIAEGENLPVYL 1238
+ SL+ + + E E +P YL
Sbjct: 979 LKARPRHSLNSLATAVKEIEEIPAYL 1004
Score = 62 (26.9 bits), Expect = 4.1e-39, Sum P(3) = 4.1e-39
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1160 KLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGAL 1219
KLL T P+ ++Q+ L ++ ++ L + ++W + ++ LD +L
Sbjct: 878 KLLSEET-PSAAELQDLLDVSFEFDVELPQLAEMRI-RLEQ--ARWLEEVQQACLDPSSL 933
Query: 1220 SLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1263
+LD + LI G L Y E R + +L + +D+KA
Sbjct: 934 TLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDKA 975
Score = 58 (25.5 bits), Expect = 2.7e-40, Sum P(4) = 2.7e-40
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 1110 EPLPNGKKKSTKLESLSDLERALTESKETA-SAMATLGEARLREMEA-------LQSLRL 1161
Query: 418 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 475
+ +D ++ C+ K PAA I +L +A + VP L+ I
Sbjct: 1162 ANEGKLLSPLQDVDIKICLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGLR-IWLC 1218
Query: 476 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1219 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
Query: 536 IN 537
N
Sbjct: 1273 GN 1274
Score = 56 (24.8 bits), Expect = 1.2e-44, Sum P(4) = 1.2e-44
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1047
C + + E++++ C +C +H C+ + + E YIC C ++ S
Sbjct: 1492 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRCTVKDAPS 1542
Score = 55 (24.4 bits), Expect = 5.1e-44, Sum P(4) = 5.1e-44
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 740
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 837 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 882
Score = 51 (23.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 1221 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC--------RKPYDEKAMIACYQC 1270
LD + EL+ G ++PV+L L++L A + C PY ++ C +C
Sbjct: 1036 LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVL-CPRC 1094
Query: 1271 D 1271
D
Sbjct: 1095 D 1095
Score = 45 (20.9 bits), Expect = 5.0e-41, Sum P(4) = 5.0e-41
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 724
S W N +L S F+ SC L S + +L+ +++ L++SL E EL + +
Sbjct: 1314 SLPDDW-DNRTSYLHSPFSTG-RSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTL 1370
Score = 43 (20.2 bits), Expect = 0.00069, Sum P(4) = 0.00069
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 428 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 465
R SV+ S CP A ++ +EA+++KI+ ET
Sbjct: 216 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEET 248
Score = 41 (19.5 bits), Expect = 2.1e-46, Sum P(4) = 2.1e-46
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNK-- 985
PE + + +++ NW+ R ++++ + V D+ GLL Q+ + NK
Sbjct: 1247 PEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGS-GLLYSRWQASAGQVSDTNKVS 1305
Query: 986 -PHGSVSMTL 994
P G+ S +L
Sbjct: 1306 QPPGTTSFSL 1315
Score = 38 (18.4 bits), Expect = 2.9e-42, Sum P(4) = 2.9e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 795
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 796 LLRHL-RLVT--QDAEKC 810
Score = 38 (18.4 bits), Expect = 1.7e-38, Sum P(3) = 1.7e-38
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 743 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 786
Score = 37 (18.1 bits), Expect = 3.4e-40, Sum P(4) = 3.4e-40
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 646 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 683
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1235 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 451 (163.8 bits), Expect = 1.1e-50, Sum P(4) = 1.1e-50
Identities = 92/217 (42%), Positives = 134/217 (61%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 465 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 524
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 525 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 584
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ CI C+ ++SA++C
Sbjct: 585 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCS 639
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K L YR+TL +LY +
Sbjct: 640 CKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 676
Score = 118 (46.6 bits), Expect = 1.1e-50, Sum P(4) = 1.1e-50
Identities = 71/339 (20%), Positives = 147/339 (43%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 680 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 737
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
AE C + + L G + + TVN + + Y + L D+
Sbjct: 738 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 797
Query: 533 LVNINGRKDQHN---VIDELNCI--LKEGASLRIQVD-DLP-LVEVE--LKKAHCREKAL 583
L + + QH+ + +E+ L++ + + D +LP L E+ L++A E+
Sbjct: 798 LNRVEDFQ-QHSQKLLSEEMPSAAELQDLLDVSFEFDVELPQLAEMRTRLEQARWLEEVQ 856
Query: 584 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 639
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 857 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 916
Query: 640 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 697
+ ++ ++I LP+ +++ + A+ WL++ E P L
Sbjct: 917 HSLNSLATAVKEIEEIPAYLPNGVALKDSVQRARDWLQDVEALQVGGRV--PV------L 968
Query: 698 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS 736
++L +LV++ + + + L LE ++ + W+ A++
Sbjct: 969 DTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAAN 1007
Score = 83 (34.3 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 701
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 821 ELQDLLDVSFEFDVELPQLAEMRTRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 874
Query: 702 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
DL V + + + K L++++ E W + A SLL+
Sbjct: 875 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 912
Score = 80 (33.2 bits), Expect = 1.1e-50, Sum P(4) = 1.1e-50
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 986 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1044
P V + +C+C ++ + + + C C+D +H C+ + + ++CP+C+ E
Sbjct: 1102 PVQDVELKVCLCQKAPAAPM--IQCELCRDAFHTSCVVVPSISQG-PRIWLCPHCRRSE 1157
Score = 77 (32.2 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 1225 FELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS- 1283
F L EG+ L + ELK C+C+K MI C C + +H CV + S
Sbjct: 1091 FRLANEGKLLSPVQDVELK--------VCLCQKA-PAAPMIQCELCRDAFHTSCVVVPSI 1141
Query: 1284 --APEIYICAACK 1294
P I++C C+
Sbjct: 1142 SQGPRIWLCPHCR 1154
Score = 76 (31.8 bits), Expect = 1.1e-50, Sum P(4) = 1.1e-50
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 1214 LDSGALSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIAC 1267
++S L ++ +EL+ AE +LP Y E+E C +P DE + C
Sbjct: 1378 MNSFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC 1437
Query: 1268 Y-QCDEWYHIDCVKL---LSAPEIYICAAC 1293
C++W+H CV + ++ E YIC C
Sbjct: 1438 DGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1467
Score = 69 (29.3 bits), Expect = 9.6e-44, Sum P(4) = 9.6e-44
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1161 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLRSVQDRVGSGL 1218
Score = 63 (27.2 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1212
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 851 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 910
Query: 1213 VLDSGALSLDKVFELIAEGENLPVYL 1238
+ SL+ + + E E +P YL
Sbjct: 911 LKARPRHSLNSLATAVKEIEEIPAYL 936
Score = 62 (26.9 bits), Expect = 7.0e-45, Sum P(4) = 7.0e-45
Identities = 17/95 (17%), Positives = 46/95 (48%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P + L++ + AR +Q++ A L ++ L+ L +R +P+ +
Sbjct: 930 EEIPAYLPNGVALKDSVQRARDWLQDVEA-LQVGGRVPVLDTLIELVTRGRSIPVHLNSL 988
Query: 415 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 448
+L ++ + W++ + ++ P ++ ++VL
Sbjct: 989 PRLELLVAEVQAWKECAANTFLTENSPYSL-LEVL 1022
Score = 60 (26.2 bits), Expect = 4.1e-39, Sum P(3) = 4.1e-39
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
++W + ++ LD +L+LD + LI G L Y E R + +L + +D+K
Sbjct: 849 ARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 906
Query: 1263 A 1263
A
Sbjct: 907 A 907
Score = 58 (25.5 bits), Expect = 7.1e-44, Sum P(5) = 7.1e-44
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 771 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSF 830
Query: 454 EALDLKIDVPETDMLLKMIGQA---ESCRARCSEALRGSMSLKTVELLLQELG 503
E D +++P+ + + QA E + C + S++L + L+ +LG
Sbjct: 831 E-FD--VELPQLAEMRTRLEQARWLEEVQQACLDP--SSLTLDDMRRLI-DLG 877
Score = 56 (24.8 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1047
C + + E++++ C +C +H C+ + + E YIC C ++ S
Sbjct: 1424 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRCTVKDAPS 1474
Score = 55 (24.4 bits), Expect = 1.4e-43, Sum P(5) = 1.4e-43
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 740
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 769 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 814
Score = 55 (24.4 bits), Expect = 1.0e-39, Sum P(4) = 1.0e-39
Identities = 45/190 (23%), Positives = 75/190 (39%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 1042 EPLPSGKKKSTKLESLSDLERALSESKETA-SAMATLGEARLREMEA-------LQSFRL 1093
Query: 418 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 475
+ +D ++ C+ K PAA I +L +A + VP + I
Sbjct: 1094 ANEGKLLSPVQDVELKVCLCQKAPAAPMIQC--ELCRDAFHTSCVVVPSISQGPR-IWLC 1150
Query: 476 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1151 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1204
Query: 536 INGRKDQHNV 545
N R Q V
Sbjct: 1205 GNLRSVQDRV 1214
Score = 48 (22.0 bits), Expect = 6.4e-40, Sum P(4) = 6.4e-40
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 1221 LDKVFELIAEGENLPVYL 1238
LD + EL+ G ++PV+L
Sbjct: 968 LDTLIELVTRGRSIPVHL 985
Score = 43 (20.2 bits), Expect = 0.00085, Sum P(5) = 0.00085
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 428 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 465
R SV+ S CP A ++ +EA+++KI+ ET
Sbjct: 148 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEET 180
Score = 41 (19.5 bits), Expect = 1.2e-46, Sum P(4) = 1.2e-46
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGT----SVGDKNSLLGLLQKIKQSVHRSLYIYNK-- 985
PE + + +++ NW+ R ++++ + SV D+ GL Q+ + NK
Sbjct: 1179 PEGDALRYMIERTVNWQHRAQQLLSSGNLRSVQDRVGS-GLWYSRWQASAGQVSETNKVS 1237
Query: 986 -PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYI 1036
P G+ S +L +S + + S + C L + P EV+ EA +
Sbjct: 1238 QPTGTTSFSLPDDWDSRASYVHSPFSSG-RSCIPLHGVSP-EVNELLMEAQL 1287
Score = 39 (18.8 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 797 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHGVKWLK--RALEV 851
HW KA S L P SL + + + E + + + L +S+ WL+ AL+V
Sbjct: 902 HWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGVALKDSVQRARDWLQDVEALQV 961
Score = 38 (18.4 bits), Expect = 2.1e-42, Sum P(4) = 2.1e-42
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 675 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 718
Score = 38 (18.4 bits), Expect = 7.9e-42, Sum P(5) = 7.9e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 669 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 727
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 728 LLRHL-RLVT--QDAEKC 742
Score = 38 (18.4 bits), Expect = 5.8e-38, Sum P(4) = 5.8e-38
Identities = 46/219 (21%), Positives = 89/219 (40%)
Query: 370 LQNY--AEEARSL--IQEINAALSACSKISELELLYS---RASGLPICIVESEKLSQRIS 422
LQ++ A E + L +Q++ + C K ++ R + C+V +SQ
Sbjct: 1088 LQSFRLANEGKLLSPVQDVELKVCLCQKAPAAPMIQCELCRDAFHTSCVVVPS-ISQ--- 1143
Query: 423 SAKVWR-DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRAR 481
++W R+ S K P + +L L+ +++ +PE D L MI + + + R
Sbjct: 1144 GPRIWLCPHCRR--SEKPPLEKILPLLASLQR----IRVRLPEGDALRYMIERTVNWQHR 1197
Query: 482 CSEALRGSMSLKTVE------LLLQELGDFTVNMPELELLKQYHSDAIF-----WIARLN 530
+ L S +L++V+ L + E + Q F W +R +
Sbjct: 1198 AQQLL-SSGNLRSVQDRVGSGLWYSRWQASAGQVSETNKVSQPTGTTSFSLPDDWDSRAS 1256
Query: 531 DILVNIN-GRK--DQHNVIDELNCILKEGASLRIQVDDL 566
+ + GR H V E+N +L E L++ + ++
Sbjct: 1257 YVHSPFSSGRSCIPLHGVSPEVNELLMEAQLLQVSLPEI 1295
Score = 37 (18.1 bits), Expect = 1.0e-39, Sum P(4) = 1.0e-39
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 700 LKDLVSQSKFLKISLKEQTELEKVI 724
+ +L+ +++ L++SL E EL + +
Sbjct: 1278 VNELLMEAQLLQVSLPEIQELYQTL 1302
Score = 37 (18.1 bits), Expect = 1.1e-39, Sum P(5) = 1.1e-39
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 646 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 683
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1167 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1204
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 442 (160.7 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 94/215 (43%), Positives = 134/215 (62%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 540 EVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 599
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 600 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAV 659
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 660 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 714
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
P VCL H LC+C + + +L YR+TL EL
Sbjct: 715 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 749
Score = 169 (64.5 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 71/277 (25%), Positives = 130/277 (46%)
Query: 325 IRDCLHKAENW-SSLPGSDS-EKVRLDC----VNELL----GFDPLPCNEPGHLI--LQN 372
+R+C+H+AE S + G S ++ R+ + EL LPC H I ++
Sbjct: 808 LRNCMHEAEACVSQVLGLVSGQEARIQTSPLTLTELRVLLEQMSSLPCAM--HQIEDVKE 865
Query: 373 YAEEARSLIQEINAAL-SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSV 431
E+ + E AL S C + + L + L + + E+ +L Q++ A+ W D V
Sbjct: 866 VLEQVEAYQIEAREALASLCPSVGLMRSLLEKGQQLGVDVPEAHQLQQQVEQAR-WLDDV 924
Query: 432 RKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKMIGQAESCRARCSEAL 486
+K ++ + I +L A +D ++ LL + + E C EA
Sbjct: 925 KKALAPSAQRGSLVIMQGLLVTGTKIASSPCVDKARAELQELLTIAERWEEKAHFCLEA- 983
Query: 487 RGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVI 546
R T+E +++E + V++P ++ LK + A WIA +++I NG D + +
Sbjct: 984 RQKHPPATLEAIIREAENIPVHLPNIQALKDALAKAQAWIADVDEIQ---NG--DHYPCL 1038
Query: 547 DELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKA 582
D+L C++ G L + +++L +E+++ AH REKA
Sbjct: 1039 DDLECLVAVGRDLPVSLEELRQLELQVLTAHSWREKA 1075
Score = 154 (59.3 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
Identities = 86/379 (22%), Positives = 164/379 (43%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 724 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKIRAESFDTWANKVRVALEVEDG 779
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS-LKTVE 496
+ L LESEA + + P +++L ++ + +AE+C ++ + G + ++T
Sbjct: 780 RKRSFEELRALESEARERRF--PNSELLQRLRNCMHEAEACVSQVLGLVSGQEARIQTSP 837
Query: 497 LLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV---IDELNCIL 553
L L EL M L D + ++ I R+ ++ + + +L
Sbjct: 838 LTLTELRVLLEQMSSLPCAMHQIEDVKEVLEQVE--AYQIEAREALASLCPSVGLMRSLL 895
Query: 554 KEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQIE 608
++G L + V + ++ ++++A + KAL + L ++ VT +
Sbjct: 896 EKGQQLGVDVPEAHQLQQQVEQARWLDDVKKALAPSAQRGSLVIMQGLLVTGTKIASSPC 955
Query: 609 REKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNE 666
+K +L +L A RWEE+A L K E IIR +++I V LP++ +++
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIREAENIPVHLPNIQALKDA 1015
Query: 667 ISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVIN 725
++ A++W+ + E+ + P C L+ L+ LV+ + L +SL+E +LE +
Sbjct: 1016 LAKAQAWIADVDEIQNGDHY---P--C----LDDLECLVAVGRDLPVSLEELRQLELQVL 1066
Query: 726 NCERWQNHASSL-LQDARC 743
W+ AS + L+ C
Sbjct: 1067 TAHSWREKASRMFLKKNSC 1085
Score = 79 (32.9 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 50/196 (25%), Positives = 83/196 (42%)
Query: 1063 SDLRMLIELLSDSEFFCRGIE-AKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1121
++LR+L+E +S IE K+VL++V +E + L + S L + L
Sbjct: 841 TELRVLLEQMSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCP--SVGLMRSL---- 894
Query: 1122 NKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLE-GLTKPTIGQIQNYLKEG 1180
L+ + GV D L + + W V K L + ++ +Q L G
Sbjct: 895 ------LEKGQQLGV-DVPEAHQLQQQVEQARWLDDVKKALAPSAQRGSLVIMQGLLVTG 947
Query: 1181 LLMNISP-KDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAEGENLPVYL 1238
+ SP D R +L EL I +W + A L++ E +I E EN+PV+L
Sbjct: 948 TKIASSPCVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIREAENIPVHL 1006
Query: 1239 E--KELKSLRARSMLY 1252
+ LK A++ +
Sbjct: 1007 PNIQALKDALAKAQAW 1022
Score = 73 (30.8 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 87/440 (19%), Positives = 172/440 (39%)
Query: 657 LPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKE 716
+ SL ++I K L+ E + A + C + L ++ L+ + + L + + E
Sbjct: 850 MSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCPSVGL--MRSLLEKGQQLGVDVPE 907
Query: 717 QTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAAN-C 775
+L++ + RW L D + L SLV L+T + A++ C
Sbjct: 908 AHQLQQQVEQA-RW-------LDDVKKALAPS----AQRGSLVIMQGLLVTGTKIASSPC 955
Query: 776 GLSLGFDFHEISELQNACST-LHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFS-SM 833
+ E+ + H+C +A P+ +E+++ AE + +
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQ--KHPPAT--LEAIIREAENIPVHLPNIQA 1011
Query: 834 LWNSLIHGVKWLKRALEVISA---PCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTS- 889
L ++L W+ E+ + PC L D+E ++A + PV + EL
Sbjct: 1012 LKDALAKAQAWIADVDEIQNGDHYPC------LDDLECLVA----VGRDLPVSLEELRQL 1061
Query: 890 ---AIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE---LEKVL----S 939
+ H W+E+ + F LK ++L+ L A + +EK L S
Sbjct: 1062 ELQVLTAHS-WREKASRMF-LK-KNSCYTLLEVLCPCAHAGSDSSKRRRWIEKELRLYRS 1118
Query: 940 KVD------KVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMT 993
D ++ + IV G++ G+LQ + + + + + S + +
Sbjct: 1119 CTDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSTTASSATS 1178
Query: 994 LCMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFG 1052
+C+C + + + L C C+D +H QC+ P + + P ++E ++ +F
Sbjct: 1179 ICVCGKVPAG-VGTLQCDLCQDWFHGQCVSVPHILSSSRPSPTSSPLLAWWEWDT--KFL 1235
Query: 1053 GSPLRFGGKRSDLRMLIELL 1072
PL +R L ++ LL
Sbjct: 1236 -CPLCMRSRRPRLETILALL 1254
Score = 72 (30.4 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 29/146 (19%), Positives = 61/146 (41%)
Query: 305 MDAVRDMVNKLIE-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCN 363
+D R + +L+ RW E CL + P + E + + N +P +
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQKH---PPATLEAIIREAEN-------IPVH 1005
Query: 364 EPGHLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRI 421
P L++ +A++ I +++ + + +LE L + LP+ + E +L ++
Sbjct: 1006 LPNIQALKDALAKAQAWIADVDEIQNGDHYPCLDDLECLVAVGRDLPVSLEELRQLELQV 1065
Query: 422 SSAKVWRDSVRKCI--SNKCPAAIEI 445
+A WR+ + N C +E+
Sbjct: 1066 LTAHSWREKASRMFLKKNSCYTLLEV 1091
Score = 63 (27.2 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQAEES 1300
C+C K + C C +W+H CV S P +I ++ +P S
Sbjct: 1180 CVCGKVPAGVGTLQCDLCQDWFHGQCV---SVP--HILSSSRPSPTSS 1222
Score = 53 (23.7 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 49/215 (22%), Positives = 81/215 (37%)
Query: 328 CLHKAENWSSLPGSDSEKVRL--DCVN-ELLGFDPLPCNEPGHLIL---QNYAEEARSLI 381
C H + S +++RL C + ELLG +PG +I+ + +E ++
Sbjct: 1095 CAHAGSDSSKRRRWIEKELRLYRSCTDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGIL 1154
Query: 382 QEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPA 441
Q + SA K S L + +S IC+ K+ + + + D + +C
Sbjct: 1155 Q-LRRTNSA--KPSPLASSTTASSATSICVCG--KVPAGVGTLQC--DLCQDWFHGQC-- 1205
Query: 442 AIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVELLLQ 500
+ V + L S P + LL + C +R L+T+ LL
Sbjct: 1206 ---VSVPHILSSSRPS-----PTSSPLLAW--WEWDTKFLCPLCMRSRRPRLETILALLV 1255
Query: 501 ELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L V +PE E L+ AI W R L +
Sbjct: 1256 ALQRLPVRLPEGEALQCLTERAIVWQGRARQALAS 1290
Score = 47 (21.6 bits), Expect = 1.6e-37, Sum P(3) = 1.6e-37
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1038 LDDLECLVAVGRDLPVSLE-ELRQL 1061
Score = 47 (21.6 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 407 LPICIVESEKLSQRISSAKVWRDSVRKCISNK 438
LP+ + E E L A VW+ R+ +++K
Sbjct: 1260 LPVRLPEGEALQCLTERAIVWQGRARQALASK 1291
Score = 41 (19.5 bits), Expect = 6.2e-48, Sum P(3) = 6.2e-48
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 745
RLE++ L+ + L + L E L+ + WQ A L +D LL
Sbjct: 1246 RLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASKDVTTLL 1297
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 439 (159.6 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 94/214 (43%), Positives = 133/214 (62%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 VMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 606
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLK 125
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 GYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVH 666
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 KEMFIMVQEERRLRKTLLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACY 721
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
P + VCL H LC+C + +L YR+TL EL
Sbjct: 722 DCPDSLVCLSHINDLCKCSRNRQYLRYRYTLDEL 755
Score = 169 (64.5 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 87/382 (22%), Positives = 170/382 (44%)
Query: 381 IQEINAALSACSKISE-LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKC 439
+ IN L CS+ + L Y+ LP + +KL R S W + V+ + +
Sbjct: 730 LSHIND-LCKCSRNRQYLRYRYT-LDELPAML---QKLKIRAESFDNWANKVQAALEVED 784
Query: 440 PAAIEIDVLYKLESEALDLKIDVPET-DMLLKMIGQAESCRARCSEALRGS--------M 490
+ L LESEA D + E L K + +AE+C ++ + S +
Sbjct: 785 GRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQI 844
Query: 491 SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELN 550
+L ++LLL+++G M +++ +K + + L ++ ++ ++ L
Sbjct: 845 TLTELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTSL-----PYS-LEILQ 898
Query: 551 CILKEGASLRIQVDDLPLVEVELKKAHCREK---ALKACDTKMPLDFIRQ--VTAEAVIL 605
++++G LR++V + +E L++A ++ AL + L +++ V V
Sbjct: 899 SLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMGTKVAS 958
Query: 606 QIEREKLFIDLSGVLAAAMRWEERAADIL--IHKAQMCEFEDIIRASQDIFVVLPSLDEV 663
K +L +L A WEE+A L K E IIR +++I V LP++ +
Sbjct: 959 SPSVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSL 1018
Query: 664 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 722
+ ++ A++W+ + +E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1019 KEALTKAQAWIADVNEIQNGDHY---P--C----LDDLEGLVAVGRDLPVELEELRQLEN 1069
Query: 723 VINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1070 QVLTAHSWKEKASKTFLKKNSC 1091
Score = 139 (54.0 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 56/234 (23%), Positives = 117/234 (50%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSACSKISE-LELLYSRASGLPICIVESEK 416
LPC H I +++ ++ S E AL++ E L+ L + L + + E+ +
Sbjct: 859 LPCTM--HQIDEVKDVLQQVESYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQ 916
Query: 417 LSQRISSAKVWRDSVRKCI--SNKCPAAIEIDVLYKLESE-ALDLKIDVPETDMLLKMIG 473
L + + A+ W D V++ + S + + + + L + ++ A ++ + L +++
Sbjct: 917 LEELLEQAQ-WLDQVKQALAPSGQRHSLVIMKKLLVMGTKVASSPSVNKARAE-LQELLT 974
Query: 474 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
AE + L+ S S T+E++++E + V +P ++ LK+ + A WIA +N+
Sbjct: 975 IAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNE 1034
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L +++++L +E ++ AH +EKA K
Sbjct: 1035 IQ---NG--DHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASK 1083
Score = 115 (45.5 bits), Expect = 4.6e-44, Sum P(3) = 4.6e-44
Identities = 70/298 (23%), Positives = 126/298 (42%)
Query: 415 EKLSQRISSAKVWRDSVRKCISN-----KCPAAIEIDVLYKLESEALDLKIDVPETDMLL 469
++L + ++ A+ V ISN + P I + L L + L + + D +
Sbjct: 812 QRLKKCLTEAEACISQVLGLISNSEDRLQTPQ-ITLTELQLLLKQMGTLPCTMHQIDEVK 870
Query: 470 KMIGQAESCRARCSEALRG-SMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 528
++ Q ES + EAL SL+ ++ L+++ V +PE L++ A W+ +
Sbjct: 871 DVLQQVESYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQ-WLDQ 929
Query: 529 LNDILVNINGRKDQHNVIDELNCI-LKEGASLRIQVDDLPLVEVELKKAHC-REKA---L 583
+ L +G++ ++ +L + K +S + L E+ L A C EKA L
Sbjct: 930 VKQALAP-SGQRHSLVIMKKLLVMGTKVASSPSVNKARAELQEL-LTIAECWEEKAHFCL 987
Query: 584 KACDTKMPLDFIRQVTAEAVILQIEREKLFI----DLSGVLAAAMRWEERAADILIHKAQ 639
KA P T E +I + E +++ L L A W +I
Sbjct: 988 KASQKHSP------ATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHY 1041
Query: 640 MC--EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWL-KNSELFLA--SAFAVAPASC 692
C + E ++ +D+ V L L +++N++ TA SW K S+ FL S + + C
Sbjct: 1042 PCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLC 1099
Score = 73 (30.8 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 98/495 (19%), Positives = 195/495 (39%)
Query: 560 RIQVDDLPLVEVELKK--------AHCREKALKACD-TKMPLDFIRQVTAEAVILQIERE 610
R +D+LP + +LK A+ + AL+ D K + +R + +EA +
Sbjct: 749 RYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNS 808
Query: 611 KLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDI-IRASQDIFVVLPSLDEVQNEIST 669
+L L L A + ++ + + I + Q + + +L ++I
Sbjct: 809 ELLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQITLTELQLLLKQMGTLPCTMHQIDE 868
Query: 670 AKSWLKNSELFLASAFAVAPASCSL-LRLESLKDLVSQSKFLKISLKEQTELEKVINNCE 728
K L+ E + A SL LE L+ L+ + + L++ + E +LE+++ +
Sbjct: 869 VKDVLQQVESY---QIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQ 925
Query: 729 RWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLG-FDFHEIS 787
W + L + G +SLV + L+ + A++ ++ + E+
Sbjct: 926 -WLDQVKQALAPS-----------GQRHSLVIMKKLLVMGTKVASSPSVNKARAELQELL 973
Query: 788 ELQNACST-LHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWL 845
+ H+C KA SP+ +E ++ AE + + L +L W+
Sbjct: 974 TIAECWEEKAHFCLKASQ--KHSPAT--LEVIIREAENIPVYLPNIQSLKEALTKAQAWI 1029
Query: 846 KRALEVISA---PCKFKRCKLSDVEEVLAGCKGINFSFPVVIGEL----TSAIQKHKLWQ 898
E+ + PC L D+E ++A + PV + EL + H W+
Sbjct: 1030 ADVNEIQNGDHYPC------LDDLEGLVA----VGRDLPVELEELRQLENQVLTAHS-WK 1078
Query: 899 EQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS 958
E+ + F LK ++L+ L +A + + + K + + +
Sbjct: 1079 EKASKTF-LK-KNSCYTLLEVLCPCADAGSVSTKR-SRWIEKEMGLYKYDTELLGLSAQD 1135
Query: 959 VGDKNSLLGLL----QKIKQSVHRSLYIYN-KPHG-SVSM-----TLCMCCESDSKELEF 1007
+ D S++ +K K+ + +I + KP S SM ++C+C + + +E
Sbjct: 1136 LRDPGSVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNASATSICICGQVCAG-VES 1194
Query: 1008 LICSACKDCYHLQCL 1022
L C C D +H QC+
Sbjct: 1195 LQCDLCHDWFHGQCV 1209
Score = 71 (30.1 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 45/187 (24%), Positives = 84/187 (44%)
Query: 1063 SDLRMLIELLSDSEFFCRGI-EAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1121
++L++L++ + I E KDVLQ+V +E + LT L L ++
Sbjct: 847 TELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTS--------LPYSLEILQ 898
Query: 1122 NKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGL-TKPTIGQIQNYLKEG 1180
+ + K ++ V +++ L+ L + W +V + L + ++ ++ L G
Sbjct: 899 SLME---KGQQLR-VEVPEAHQ-LEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMG 953
Query: 1181 LLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLE 1239
+ SP + R +L EL I W + A + S S + +I E EN+PVYL
Sbjct: 954 TKVASSPSVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLP 1013
Query: 1240 KELKSLR 1246
++SL+
Sbjct: 1014 N-IQSLK 1019
Score = 63 (27.2 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 38/188 (20%), Positives = 78/188 (41%)
Query: 264 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRW 321
+ +L+EQ WL +V Q L S +L+ ++ L G ++ A VNK +
Sbjct: 917 LEELLEQAQWLD---QVKQALAPSGQRHSLVI-MKKLLVMGTKV-ASSPSVNKARAELQE 971
Query: 322 AEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLI 381
I +C + ++ L+ + + + +P P L+ +A++ I
Sbjct: 972 LLTIAECWEEKAHFCLKASQKHSPATLEVI--IREAENIPVYLPNIQSLKEALTKAQAWI 1029
Query: 382 QEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCI--SN 437
++N + + +LE L + LP+ + E +L ++ +A W++ K N
Sbjct: 1030 ADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKN 1089
Query: 438 KCPAAIEI 445
C +E+
Sbjct: 1090 SCYTLLEV 1097
Score = 61 (26.5 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1244 SLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV 1279
S+ A + CIC + + C C +W+H CV
Sbjct: 1174 SMNASATSICICGQVCAGVESLQCDLCHDWFHGQCV 1209
Score = 50 (22.7 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 1193 QKLMELNRIGSQW-ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1245
Q L E W ADV ++ LD + L+A G +LPV LE EL+ L
Sbjct: 1016 QSLKEALTKAQAWIADV-NEIQNGDHYPCLDDLEGLVAVGRDLPVELE-ELRQL 1067
Score = 49 (22.3 bits), Expect = 9.9e-37, Sum P(4) = 9.9e-37
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L +V +PE E L+ AI W R L +
Sbjct: 1250 LETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALAS 1293
Score = 46 (21.3 bits), Expect = 5.3e-45, Sum P(3) = 5.3e-45
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 745
RLE++ L+ + L + L E L+ + WQ A L +D LL
Sbjct: 1249 RLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALL 1300
Score = 41 (19.5 bits), Expect = 1.8e-44, Sum P(3) = 1.8e-44
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 649 ASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSK 708
AS+D+ +L L++ + ++ K L S FA C L S KD++ + +
Sbjct: 1292 ASEDVTALLKQLEKSRQQLQDELRHKKPPTL--PSGFAF---DC--LTENSGKDILKEEE 1344
Query: 709 FLKISLKEQTELEKVI---NNCERWQNHASSLL 738
L ++ + EK++ ++C+ + SLL
Sbjct: 1345 ELVLNEERIKSSEKIVPKESSCKGDKELLPSLL 1377
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 447 (162.4 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 91/217 (41%), Positives = 134/217 (61%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 473 VMKKLAPELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 532
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 533 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 592
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C
Sbjct: 593 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSALSCC 647
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K L YR+TL +LY +
Sbjct: 648 CKPGLLVCLHHVQELCSCPPYKYKLRYRYTLDDLYPM 684
Score = 137 (53.3 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 74/341 (21%), Positives = 146/341 (42%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 688 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 745
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHS--DAIFWIARLN 530
AE C + + L G + + TVN EL + + Q H+ + L
Sbjct: 746 DAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVN--ELRQFVTQLHALPCVLSQTPLLK 803
Query: 531 DILVNINGRKDQHNV---------IDELNCILKEGASLRIQVDDLPLVEVELKKAHCREK 581
D+L + + QH+ EL +L +++ L + V L++AH E+
Sbjct: 804 DLLNRVEDFQ-QHSQKLLSEEMPSASELQDLLDVSFEFDVELPQLAEMRVRLEQAHWLEE 862
Query: 582 ALKAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHK 637
+AC D + + LD +R++ V L EK L +L + W+++A +L +
Sbjct: 863 VQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKAR 922
Query: 638 AQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLL 695
+ + +++ ++I LP+ +++ + A+ WL+ E A P
Sbjct: 923 PRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDWLQEVEALQAGGRV--PV----- 975
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS 736
L++L +LV++ + + + L LE ++ W+ A++
Sbjct: 976 -LDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAAN 1015
Score = 102 (41.0 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 56/268 (20%), Positives = 110/268 (41%)
Query: 797 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 853
HW KA S L P SL + +++ E + + + L +S+ WL+ +E +
Sbjct: 910 HWDDKAKSLLKARPRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDWLQE-VEALQ 968
Query: 854 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS 913
A + L + E++ + I P + L S + + +W+E F K S
Sbjct: 969 AGGRVP--VLDTLVELVTRGRCIPVHLPS-LPRLESLVAEVHVWKECAANTFLTK--NSS 1023
Query: 914 WSLM-----------LQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS---- 958
+SL+ L LK P +K +V+ + + ++ E T+
Sbjct: 1024 YSLLEVLCPRCDIGLLGLKRKQRKLKDPLPSGKKKSPRVESLSDLERTLMESRETASAMA 1083
Query: 959 -VGDKNSL-LGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDC 1016
+G+ + + LQ ++Q+ L P V M +C+C ++ + + + C C+D
Sbjct: 1084 ALGEARAREMEALQSLRQANEEKLL---SPVHDVEMRVCVCQKAPAAPM--VQCELCRDA 1138
Query: 1017 YHLQCLRPTEVDRNHAEAYICPYCQYFE 1044
+H C+ + + ++CP C+ E
Sbjct: 1139 FHTSCVAAPSIPQG-PRVWLCPNCRRSE 1165
Score = 98 (39.6 bits), Expect = 0.00082, Sum P(4) = 0.00082
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 985 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1044
K +V + +C+ C S S E L+C C D YH CL P D + + CP C E
Sbjct: 242 KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 300
Query: 1045 -SESVSQFG 1052
S+ FG
Sbjct: 301 CSKPQEAFG 309
Score = 80 (33.2 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1239 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYICAACK 1294
EK L + M C+C+K M+ C C + +H CV S P+ +++C C+
Sbjct: 1105 EKLLSPVHDVEMRVCVCQKA-PAAPMVQCELCRDAFHTSCVAAPSIPQGPRVWLCPNCR 1162
Score = 78 (32.5 bits), Expect = 4.4e-43, Sum P(4) = 4.4e-43
Identities = 43/222 (19%), Positives = 94/222 (42%)
Query: 325 IRDCLHKAENWSSLPGSDSEKVRLDCVNELLG----FDPLPCNEPGHLILQNYAEEARSL 380
+++ L +E+W S + +N L + +P + P L++ + AR
Sbjct: 901 LQELLTVSEHWDDKAKSLLKARPRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDW 960
Query: 381 IQEINAALSACSKISELELLY---SRASGLPICIVESEKLSQRISSAKVWRDSVRKCISN 437
+QE+ A L A ++ L+ L +R +P+ + +L ++ VW++
Sbjct: 961 LQEVEA-LQAGGRVPVLDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAANTFLT 1019
Query: 438 KCPAAIEIDVLY-KLESEALDLKIDVPETDMLLKMIGQAESCRARC-SEALRGSMSLKTV 495
K + ++VL + + L LK + L G+ +S R S+ R M +
Sbjct: 1020 KNSSYSLLEVLCPRCDIGLLGLKRKQRKLKDPLPS-GKKKSPRVESLSDLERTLMESRET 1078
Query: 496 ELLLQELGDFTVN-MPELELLKQYHSDAIFWIARLNDILVNI 536
+ LG+ M L+ L+Q + + + ++ ++D+ + +
Sbjct: 1079 ASAMAALGEARAREMEALQSLRQANEEKL--LSPVHDVEMRV 1118
Score = 77 (32.2 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 701
E +D++ S + V LP L E++ + A WL+ E+ A + P+S +L + L
Sbjct: 829 ELQDLLDVSFEFDVELPQLAEMRVRLEQAH-WLE--EVQQA---CLDPSSLTLDDMRRLI 882
Query: 702 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
DL V + + + K L++++ E W + A SLL+
Sbjct: 883 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 920
Score = 69 (29.3 bits), Expect = 3.7e-42, Sum P(4) = 3.7e-42
Identities = 45/264 (17%), Positives = 113/264 (42%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 779 VNELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSASELQDLLDVSF 838
Query: 454 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL 512
E D+++ + E + L+ E + C + S++L + L+ +LG +
Sbjct: 839 E-FDVELPQLAEMRVRLEQAHWLEEVQQACLDP--SSLTLDDMRRLI-DLGVGLAPYSAV 894
Query: 513 ELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVE 572
E + + +D ++ + +H+ ++ L ++KE + + + ++
Sbjct: 895 EKAMARLQELLTVSEHWDDKAKSLLKARPRHS-LNSLAAVVKEIEEIPAHLPNGAALKDS 953
Query: 573 LKKAH--CRE-KALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEER 629
+++A +E +AL+A LD + ++ + + L L ++A W+E
Sbjct: 954 VQRARDWLQEVEALQAGGRVPVLDTLVELVTRGRCIPVHLPSL-PRLESLVAEVHVWKEC 1012
Query: 630 AADILIHKAQMCEFEDIIRASQDI 653
AA+ + K +++ DI
Sbjct: 1013 AANTFLTKNSSYSLLEVLCPRCDI 1036
Score = 67 (28.6 bits), Expect = 4.4e-43, Sum P(4) = 4.4e-43
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1169 LEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLLSSGHLKSLQDPVGSGL 1226
Score = 60 (26.2 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1255 CRKPY-DEKAMIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1293
C +P DE + C C W+H CV + + E Y+C C
Sbjct: 1432 CLQPEGDEVDWVQCDGSCSRWFHQVCVGVSPETAEEEDYVCVRC 1475
Score = 60 (26.2 bits), Expect = 7.7e-45, Sum P(4) = 7.7e-45
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
L + L+ V+Q L L + L+ ++N E +Q H+ LL + + ++ D L
Sbjct: 777 LTVNELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEE--MPSASELQDLL 834
Query: 755 SNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNAC 793
S +E + A + L H + E+Q AC
Sbjct: 835 DVSFEFDVE-----LPQLAEMRVRLE-QAHWLEEVQQAC 867
Score = 60 (26.2 bits), Expect = 1.4e-42, Sum P(4) = 1.4e-42
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1212
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 859 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 918
Query: 1213 VLDSGALSLDKVFELIAEGENLPVYL 1238
+ SL+ + ++ E E +P +L
Sbjct: 919 LKARPRHSLNSLAAVVKEIEEIPAHL 944
Score = 59 (25.8 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
+ W + ++ LD +L+LD + LI G L Y E R + +L + +D+K
Sbjct: 857 AHWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 914
Query: 1263 A 1263
A
Sbjct: 915 A 915
Score = 52 (23.4 bits), Expect = 3.0e-45, Sum P(4) = 3.0e-45
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + E++++ C +C +H C+ + + E Y+C C
Sbjct: 1432 CLQPEGDEVDWVQCDGSCSRWFHQVCVGVSP-ETAEEEDYVCVRC 1475
Score = 48 (22.0 bits), Expect = 1.3e-37, Sum P(4) = 1.3e-37
Identities = 38/177 (21%), Positives = 68/177 (38%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
DPLP + +++ ++ R+L++ A SA + + E A + EKL
Sbjct: 1050 DPLPSGKKKSPRVESLSDLERTLMESRETA-SAMAALGEARAREMEALQ-SLRQANEEKL 1107
Query: 418 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 476
+ ++ R C+ K PAA + +L +A + P + +
Sbjct: 1108 LSPVHDVEM-----RVCVCQKAPAAPMVQC--ELCRDAFHTSCVAAPSIPQGPR-VWLCP 1159
Query: 477 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 533
+CR SE L+ + LL L V +PE + L+ + W R +L
Sbjct: 1160 NCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLL 1210
Score = 47 (21.6 bits), Expect = 6.5e-41, Sum P(4) = 6.5e-41
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 1221 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC 1255
LD + EL+ G +PV+L L+SL A ++ C
Sbjct: 976 LDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKEC 1012
Score = 44 (20.5 bits), Expect = 1.0e-40, Sum P(4) = 1.0e-40
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 724
S W N +L S F+ + L + + +L+ +++ L++SL E EL + +
Sbjct: 1254 SLPDDW-DNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTL 1310
Score = 42 (19.8 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVE------LLLQELGDFTVNMPE 511
+++ +PE D L MI + S + R + L S LK+++ LL +PE
Sbjct: 1182 IRVRLPEGDALRYMIERTVSWQHRARQLL-SSGHLKSLQDPVGSGLLCGRWQATAGQVPE 1240
Query: 512 LELLKQYHSDAIF-----WIARLNDILVNIN-GRK--DQHNVIDELNCILKEGASLRIQV 563
+ Q F W R + + + GR H + E+N +L E L++ +
Sbjct: 1241 TSKMSQPPGPTSFSLPDDWDNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSL 1300
Query: 564 DDLP-LVEVELKKAHCREKA 582
++ L + L K ++A
Sbjct: 1301 PEIQELYQTLLAKPSPAQQA 1320
Score = 40 (19.1 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 428 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 465
R SV+ + CP A ++ +EA+++KI+ ET
Sbjct: 156 RQSVQP--AETCPPARRAK---RMRAEAMNIKIEPEET 188
Score = 40 (19.1 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 539 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 594
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 112 RGHYERILNPYNLFLS-GDSLRCLQKPNLSTDTKDKEYKPHGIPQRQSVQPAETCPPARR 170
Query: 595 IRQVTAEAVILQIEREK 611
+++ AEA+ ++IE E+
Sbjct: 171 AKRMRAEAMNIKIEPEE 187
Score = 38 (18.4 bits), Expect = 1.4e-42, Sum P(4) = 1.4e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 677 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 735
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 736 LLRHL-RLVT--QDAEKC 750
Score = 38 (18.4 bits), Expect = 2.7e-40, Sum P(4) = 2.7e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 683 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 726
Score = 38 (18.4 bits), Expect = 4.4e-40, Sum P(4) = 4.4e-40
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 646 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 683
++ + Q I V LP D ++ I SW + L+S
Sbjct: 1175 LLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLLSS 1212
Score = 37 (18.1 bits), Expect = 4.4e-46, Sum P(4) = 4.4e-46
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSL 965
PE + + +++ +W+ R ++++ S G SL
Sbjct: 1187 PEGDALRYMIERTVSWQHRARQLL--SSGHLKSL 1218
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 452 (164.2 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 93/217 (42%), Positives = 135/217 (62%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN
Sbjct: 496 VMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQ 555
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ ++
Sbjct: 556 GFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQ 615
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+M RE++ + G+ S + P+ ++ C C+ ++SAV C
Sbjct: 616 KDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKTTCFMSAVYCP 670
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 671 CKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 707
Score = 130 (50.8 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 711 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 768
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 769 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 828
Query: 533 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 584
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 829 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 888
Query: 585 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 639
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 889 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 948
Query: 640 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 698
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 949 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1000
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 751
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1001 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1060
Query: 752 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 809
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1061 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1113
Query: 810 PSLEDVESLMAVAEG 824
+E + SL A EG
Sbjct: 1114 KEMEALRSLRAANEG 1128
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 985 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 265 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 319
Score = 81 (33.6 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1193 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1250
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1086 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1141
Query: 1251 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1294
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1142 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1185
Score = 80 (33.2 bits), Expect = 1.5e-45, Sum P(4) = 1.5e-45
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 802 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 859
Query: 454 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 509
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 860 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 918
Query: 510 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 563
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 919 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 977
Query: 564 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 621
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 978 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1027
Query: 622 AAMRWEERAADILI 635
W+E AA+ +
Sbjct: 1028 EVQAWKECAANTFL 1041
Score = 76 (31.8 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 697 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 755
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 739 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 797
Query: 756 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 815
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 798 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 853
Query: 816 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 875
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 854 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 910
Query: 876 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 932
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 911 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 968
Query: 933 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 971
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 969 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1008
Score = 72 (30.4 bits), Expect = 6.3e-48, Sum P(4) = 6.3e-48
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1255 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1293
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1458 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1501
Score = 72 (30.4 bits), Expect = 1.5e-45, Sum P(4) = 1.5e-45
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1192 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1249
Score = 65 (27.9 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1150 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1207
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 938 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 985
Query: 1208 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1257
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 986 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1045
Query: 1258 PYDEKAMIACYQCD 1271
PY ++ C +CD
Sbjct: 1046 PYSLLEVL-CPRCD 1058
Score = 63 (27.2 bits), Expect = 6.8e-41, Sum P(4) = 6.8e-41
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 923 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 967
Score = 59 (25.8 bits), Expect = 3.4e-44, Sum P(4) = 3.4e-44
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 619 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 667
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1218 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1276
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 724
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1277 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1333
Score = 58 (25.5 bits), Expect = 2.9e-43, Sum P(4) = 2.9e-43
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 961 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1019
Query: 415 EKLSQRISSAKVWRD 429
+L ++ + W++
Sbjct: 1020 PRLESLVAEVQAWKE 1034
Score = 57 (25.1 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1458 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1501
Score = 47 (21.6 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 880 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 937
Query: 1263 A 1263
A
Sbjct: 938 A 938
Score = 45 (20.9 bits), Expect = 6.3e-48, Sum P(4) = 6.3e-48
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 987
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1210 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1268
Query: 988 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1036
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1269 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1318
Score = 44 (20.5 bits), Expect = 6.8e-41, Sum P(4) = 6.8e-41
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + +K SL+ I++S
Sbjct: 706 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 749
Score = 41 (19.5 bits), Expect = 1.6e-41, Sum P(4) = 1.6e-41
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 325 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 382
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 973 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1027
Query: 383 EINA 386
E+ A
Sbjct: 1028 EVQA 1031
Score = 40 (19.1 bits), Expect = 3.2e-39, Sum P(5) = 3.2e-39
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 482 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 537
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1181 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1237
Score = 40 (19.1 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 372 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 429
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1224 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1281
Query: 430 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 477
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1282 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1338
Score = 38 (18.4 bits), Expect = 5.1e-39, Sum P(5) = 5.1e-39
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 492
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1205 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1240
Score = 37 (18.1 bits), Expect = 6.3e-42, Sum P(4) = 6.3e-42
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 672
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1308 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1338
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 452 (164.2 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 93/217 (42%), Positives = 135/217 (62%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN
Sbjct: 507 VMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQ 566
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ ++
Sbjct: 567 GFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQ 626
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+M RE++ + G+ S + P+ ++ C C+ ++SAV C
Sbjct: 627 KDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKTTCFMSAVYCP 681
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 682 CKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 718
Score = 130 (50.8 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 722 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 779
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 780 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 839
Query: 533 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 584
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 840 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 899
Query: 585 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 639
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 900 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 959
Query: 640 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 698
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 960 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1011
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 751
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1012 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1071
Query: 752 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 809
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1072 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1124
Query: 810 PSLEDVESLMAVAEG 824
+E + SL A EG
Sbjct: 1125 KEMEALRSLRAANEG 1139
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 985 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 276 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 330
Score = 81 (33.6 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1193 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1250
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1097 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1152
Query: 1251 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1294
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1153 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1196
Score = 80 (33.2 bits), Expect = 1.6e-45, Sum P(4) = 1.6e-45
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 813 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 870
Query: 454 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 509
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 871 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 929
Query: 510 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 563
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 930 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 988
Query: 564 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 621
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 989 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1038
Query: 622 AAMRWEERAADILI 635
W+E AA+ +
Sbjct: 1039 EVQAWKECAANTFL 1052
Score = 76 (31.8 bits), Expect = 1.4e-42, Sum P(3) = 1.4e-42
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 697 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 755
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 750 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 808
Query: 756 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 815
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 809 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 864
Query: 816 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 875
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 865 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 921
Query: 876 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 932
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 922 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 979
Query: 933 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 971
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 980 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1019
Score = 72 (30.4 bits), Expect = 6.6e-48, Sum P(4) = 6.6e-48
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1255 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1293
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1469 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1512
Score = 72 (30.4 bits), Expect = 1.6e-45, Sum P(4) = 1.6e-45
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1203 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1260
Score = 65 (27.9 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1150 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1207
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 949 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 996
Query: 1208 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1257
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 997 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1056
Query: 1258 PYDEKAMIACYQCD 1271
PY ++ C +CD
Sbjct: 1057 PYSLLEVL-CPRCD 1069
Score = 63 (27.2 bits), Expect = 7.2e-41, Sum P(4) = 7.2e-41
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 934 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 978
Score = 59 (25.8 bits), Expect = 3.5e-44, Sum P(4) = 3.5e-44
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 619 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 667
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1229 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1287
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 724
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1288 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1344
Score = 58 (25.5 bits), Expect = 3.0e-43, Sum P(4) = 3.0e-43
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 972 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1030
Query: 415 EKLSQRISSAKVWRD 429
+L ++ + W++
Sbjct: 1031 PRLESLVAEVQAWKE 1045
Score = 57 (25.1 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1469 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1512
Score = 47 (21.6 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 891 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 948
Query: 1263 A 1263
A
Sbjct: 949 A 949
Score = 45 (20.9 bits), Expect = 6.6e-48, Sum P(4) = 6.6e-48
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 987
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1221 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1279
Query: 988 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1036
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1280 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1329
Score = 44 (20.5 bits), Expect = 7.2e-41, Sum P(4) = 7.2e-41
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + +K SL+ I++S
Sbjct: 717 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 760
Score = 41 (19.5 bits), Expect = 1.7e-41, Sum P(4) = 1.7e-41
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 325 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 382
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 984 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1038
Query: 383 EINA 386
E+ A
Sbjct: 1039 EVQA 1042
Score = 40 (19.1 bits), Expect = 3.4e-39, Sum P(5) = 3.4e-39
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 482 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 537
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1192 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1248
Score = 40 (19.1 bits), Expect = 3.4e-38, Sum P(4) = 3.4e-38
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 372 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 429
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1235 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1292
Query: 430 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 477
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1293 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1349
Score = 38 (18.4 bits), Expect = 5.4e-39, Sum P(5) = 5.4e-39
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 492
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1216 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1251
Score = 37 (18.1 bits), Expect = 6.6e-42, Sum P(4) = 6.6e-42
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 672
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1319 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1349
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 452 (164.2 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 93/217 (42%), Positives = 135/217 (62%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN
Sbjct: 508 VMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQ 567
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ ++
Sbjct: 568 GFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQ 627
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+M RE++ + G+ S + P+ ++ C C+ ++SAV C
Sbjct: 628 KDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKTTCFMSAVYCP 682
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 683 CKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 719
Score = 130 (50.8 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 723 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 780
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 781 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 840
Query: 533 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 584
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 841 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 900
Query: 585 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 639
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 901 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 960
Query: 640 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 698
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 961 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1012
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 751
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1013 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1072
Query: 752 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 809
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1073 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1125
Query: 810 PSLEDVESLMAVAEG 824
+E + SL A EG
Sbjct: 1126 KEMEALRSLRAANEG 1140
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 985 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 277 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 331
Score = 81 (33.6 bits), Expect = 3.7e-49, Sum P(3) = 3.7e-49
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1193 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1250
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1098 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1153
Query: 1251 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1294
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1154 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1197
Score = 80 (33.2 bits), Expect = 1.6e-45, Sum P(4) = 1.6e-45
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 814 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 871
Query: 454 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 509
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 872 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 930
Query: 510 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 563
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 931 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 989
Query: 564 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 621
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 990 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1039
Query: 622 AAMRWEERAADILI 635
W+E AA+ +
Sbjct: 1040 EVQAWKECAANTFL 1053
Score = 76 (31.8 bits), Expect = 1.4e-42, Sum P(3) = 1.4e-42
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 697 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 755
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 751 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 809
Query: 756 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 815
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 810 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 865
Query: 816 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 875
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 866 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 922
Query: 876 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 932
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 923 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 980
Query: 933 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 971
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 981 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1020
Score = 72 (30.4 bits), Expect = 6.7e-48, Sum P(4) = 6.7e-48
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1255 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1293
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1470 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1513
Score = 72 (30.4 bits), Expect = 1.6e-45, Sum P(4) = 1.6e-45
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1204 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1261
Score = 65 (27.9 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1150 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1207
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 950 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 997
Query: 1208 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1257
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 998 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1057
Query: 1258 PYDEKAMIACYQCD 1271
PY ++ C +CD
Sbjct: 1058 PYSLLEVL-CPRCD 1070
Score = 63 (27.2 bits), Expect = 7.2e-41, Sum P(4) = 7.2e-41
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 935 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 979
Score = 59 (25.8 bits), Expect = 3.5e-44, Sum P(4) = 3.5e-44
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 619 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 667
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1230 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1288
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 724
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1289 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1345
Score = 58 (25.5 bits), Expect = 3.0e-43, Sum P(4) = 3.0e-43
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 973 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1031
Query: 415 EKLSQRISSAKVWRD 429
+L ++ + W++
Sbjct: 1032 PRLESLVAEVQAWKE 1046
Score = 57 (25.1 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1470 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1513
Score = 47 (21.6 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 892 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 949
Query: 1263 A 1263
A
Sbjct: 950 A 950
Score = 45 (20.9 bits), Expect = 6.7e-48, Sum P(4) = 6.7e-48
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 987
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1222 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1280
Query: 988 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1036
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1281 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1330
Score = 44 (20.5 bits), Expect = 7.2e-41, Sum P(4) = 7.2e-41
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + +K SL+ I++S
Sbjct: 718 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 761
Score = 41 (19.5 bits), Expect = 1.7e-41, Sum P(4) = 1.7e-41
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 325 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 382
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 985 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1039
Query: 383 EINA 386
E+ A
Sbjct: 1040 EVQA 1043
Score = 40 (19.1 bits), Expect = 3.4e-39, Sum P(5) = 3.4e-39
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 482 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 537
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1193 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1249
Score = 40 (19.1 bits), Expect = 3.5e-38, Sum P(4) = 3.5e-38
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 372 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 429
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1236 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1293
Query: 430 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 477
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1294 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1350
Score = 38 (18.4 bits), Expect = 5.5e-39, Sum P(5) = 5.5e-39
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 492
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1217 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1252
Score = 37 (18.1 bits), Expect = 6.7e-42, Sum P(4) = 6.7e-42
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 672
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1320 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1350
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 450 (163.5 bits), Expect = 1.0e-48, Sum P(3) = 1.0e-48
Identities = 91/217 (41%), Positives = 134/217 (61%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 375 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 434
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 435 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 494
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C
Sbjct: 495 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCS 549
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K L YR+TL +LY +
Sbjct: 550 CKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 586
Score = 121 (47.7 bits), Expect = 1.0e-48, Sum P(3) = 1.0e-48
Identities = 69/337 (20%), Positives = 142/337 (42%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 590 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 647
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
AE C + + L G + + TVN + + Y + L D+
Sbjct: 648 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 707
Query: 533 LVNINGRKDQHN--VIDE-------LNCILKEGASLRIQVDDLPLVEVELKKAHCREKAL 583
L + + QH+ ++ E L +L +++ L + + L++A E+
Sbjct: 708 LNRVEDFQ-QHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQ 766
Query: 584 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 639
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 767 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 826
Query: 640 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 697
+ ++ ++I LP+ +++ + A+ WL++ E A P L
Sbjct: 827 HSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRV--PV------L 878
Query: 698 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 734
++L +LV++ + + + L LE ++ + W+ A
Sbjct: 879 DTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECA 915
Score = 84 (34.6 bits), Expect = 1.0e-48, Sum P(3) = 1.0e-48
Identities = 26/133 (19%), Positives = 59/133 (44%)
Query: 917 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 976
+L LK P +K +K++ + + ++ E T+ + LG + +
Sbjct: 940 LLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETA--SAMATLGEARLREMEA 997
Query: 977 HRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNH 1031
+SL + N+ P V + +C+C ++ + + + C C+D +H C+ + +
Sbjct: 998 LQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPM--IQCELCRDAFHTSCVAVPSISQG- 1054
Query: 1032 AEAYICPYCQYFE 1044
++CP+C+ E
Sbjct: 1055 LRIWLCPHCRRSE 1067
Score = 80 (33.2 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 701
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 731 ELQDLLDVSFEFDVELPQLAEMRIRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 784
Query: 702 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
DL V + + + K L++++ E W + A SLL+
Sbjct: 785 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 822
Score = 71 (30.1 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 1174 QNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1233
Q LKE L N K + L +L R ++ + A + G L ++ L ++
Sbjct: 947 QRKLKEPL-PNGKKKSTKLESLSDLERALTESKETASAMAT-LGEARLREMEAL----QS 1000
Query: 1234 LPVYLEKELKS-LRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYI 1289
L + E +L S L+ + C+C+K MI C C + +H CV + S + I++
Sbjct: 1001 LRLANEGKLLSPLQDVDIKICLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGLRIWL 1059
Query: 1290 CAACK 1294
C C+
Sbjct: 1060 CPHCR 1064
Score = 71 (30.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1071 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGL 1128
Score = 65 (27.9 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P L++ + AR +Q++ L A ++ L+ L +R +P+ +
Sbjct: 840 EEIPAYLPNGAALKDSVQRARDWLQDVEG-LQAGGRVPVLDTLIELVTRGRSIPVHLNSL 898
Query: 415 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 448
+L ++ + W++ +V ++ P ++ ++VL
Sbjct: 899 PRLETLVAEVQAWKECAVNTFLTENSPYSL-LEVL 932
Score = 63 (27.2 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 681 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSF 740
Query: 454 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQ---ELGDFTVNM 509
E D+++ + E + L+ E + C + S++L + L+ L ++
Sbjct: 741 E-FDVELPQLAEMRIRLEQARWLEEVQQACLDP--SSLTLDDMRRLIDLGVGLAPYSAVE 797
Query: 510 PELELLKQYHSDAIFWIARLNDILV-----NINGRKDQHNVIDELNCILKEGASLRIQV 563
+ L++ + + W + +L ++N I+E+ L GA+L+ V
Sbjct: 798 KAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSV 856
Score = 63 (27.2 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1212
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 761 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 820
Query: 1213 VLDSGALSLDKVFELIAEGENLPVYL 1238
+ SL+ + + E E +P YL
Sbjct: 821 LKARPRHSLNSLATAVKEIEEIPAYL 846
Score = 62 (26.9 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1160 KLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGAL 1219
KLL T P+ ++Q+ L ++ ++ L + ++W + ++ LD +L
Sbjct: 720 KLLSEET-PSAAELQDLLDVSFEFDVELPQLAEMRI-RLEQ--ARWLEEVQQACLDPSSL 775
Query: 1220 SLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1263
+LD + LI G L Y E R + +L + +D+KA
Sbjct: 776 TLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDKA 817
Score = 58 (25.5 bits), Expect = 4.3e-38, Sum P(3) = 4.3e-38
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 952 EPLPNGKKKSTKLESLSDLERALTESKETA-SAMATLGEARLREMEA-------LQSLRL 1003
Query: 418 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 475
+ +D ++ C+ K PAA I +L +A + VP L+ I
Sbjct: 1004 ANEGKLLSPLQDVDIKICLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGLR-IWLC 1060
Query: 476 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1061 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1114
Query: 536 IN 537
N
Sbjct: 1115 GN 1116
Score = 55 (24.4 bits), Expect = 7.8e-42, Sum P(3) = 7.8e-42
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 740
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 679 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 724
Score = 51 (23.0 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 1221 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC--------RKPYDEKAMIACYQC 1270
LD + EL+ G ++PV+L L++L A + C PY ++ C +C
Sbjct: 878 LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVL-CPRC 936
Query: 1271 D 1271
D
Sbjct: 937 D 937
Score = 45 (20.9 bits), Expect = 8.1e-39, Sum P(3) = 8.1e-39
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 724
S W N +L S F+ SC L S + +L+ +++ L++SL E EL + +
Sbjct: 1156 SLPDDW-DNRTSYLHSPFSTG-RSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTL 1212
Score = 41 (19.5 bits), Expect = 3.1e-44, Sum P(3) = 3.1e-44
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNK-- 985
PE + + +++ NW+ R ++++ + V D+ GLL Q+ + NK
Sbjct: 1089 PEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGS-GLLYSRWQASAGQVSDTNKVS 1147
Query: 986 -PHGSVSMTL 994
P G+ S +L
Sbjct: 1148 QPPGTTSFSL 1157
Score = 38 (18.4 bits), Expect = 4.6e-40, Sum P(3) = 4.6e-40
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 579 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 637
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 638 LLRHL-RLVT--QDAEKC 652
Score = 38 (18.4 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 585 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 628
Score = 37 (18.1 bits), Expect = 5.5e-38, Sum P(3) = 5.5e-38
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 646 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 683
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1077 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1114
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 453 (164.5 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 92/217 (42%), Positives = 135/217 (62%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 533 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 592
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 593 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 652
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ CI C+ ++SA++C
Sbjct: 653 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCS 707
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K +L YR+TL +LY +
Sbjct: 708 CKPGLLVCLHHVKELCSCPPYKYNLRYRYTLDDLYPM 744
Score = 129 (50.5 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 70/337 (20%), Positives = 143/337 (42%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 748 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 805
Query: 475 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 532
AE C + + L G + + TVN + + Y + L D+
Sbjct: 806 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 865
Query: 533 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 584
L + + Q + +E+ L+E + + D +LP L E + L++A E+ +
Sbjct: 866 LNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEFDVELPQLTEMRIRLEQARWLEEVQQ 925
Query: 585 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 639
AC + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 926 ACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRH 985
Query: 640 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 698
+ ++ ++I LP+ +++ + A+ W+++ + A P LE
Sbjct: 986 SLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDWVQDVDALQAGGRV--PV------LE 1037
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 735
+L +LV++ + + + L LE ++ W+ A+
Sbjct: 1038 TLIELVARGRSIPVHLNSLPRLEMLVAEVHAWKECAA 1074
Score = 93 (37.8 bits), Expect = 4.6e-45, Sum P(3) = 4.6e-45
Identities = 68/370 (18%), Positives = 152/370 (41%)
Query: 697 LESLKDLVSQS-KFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 755
L ++D QS K L + EL+++++ + L + R L++ + +
Sbjct: 866 LNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEFDVELPQLTE-MRIRLEQARWLEEVQ 924
Query: 756 NSLVSKIEQLITSMESAANCGLSLG-FDFHE--ISELQNACSTL-HWCKKALSFLSVSP- 810
+ + + M + G+ L + E ++ LQ + HW KA S L P
Sbjct: 925 QACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPR 984
Query: 811 -SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEE 868
SL + + + E + + ++L +S+ W++ ++ + A + L + E
Sbjct: 985 HSLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDWVQD-VDALQAGGRVP--VLETLIE 1041
Query: 869 VLAGCKGINF---SFP---VVIGELTS---AIQKHKLWQEQVHQFFNLKCAQQSWSLMLQ 919
++A + I S P +++ E+ + K L + + + C + L L
Sbjct: 1042 LVARGRSIPVHLNSLPRLEMLVAEVHAWKECAAKTFLPENSTYSLLEVLCPRCDIGL-LG 1100
Query: 920 LKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 979
LK P +K +K++ + + ++ E T+ + LG + + +S
Sbjct: 1101 LKRKQRKLKEPLPSGKKRSTKLESLSDLERALMESKETAAA--MATLGEARLREMEALQS 1158
Query: 980 LYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEA 1034
L N+ P + M +C+C ++ + + + C C+D +H C+ + ++ +
Sbjct: 1159 LRFANEEKLLSPVQDLEMKVCLCQKTPATPM--IQCELCRDAFHTSCVAAPSISQS-SRI 1215
Query: 1035 YICPYCQYFE 1044
++CP+C+ E
Sbjct: 1216 WLCPHCRRSE 1225
Score = 80 (33.2 bits), Expect = 9.9e-47, Sum P(4) = 9.9e-47
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 756
LE + L++ + +++ L E L +I WQ+ A LL L +D +G GL +
Sbjct: 1229 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKLVQDQVGSGLLS 1288
Query: 757 S 757
S
Sbjct: 1289 S 1289
Score = 78 (32.5 bits), Expect = 5.7e-48, Sum P(4) = 5.7e-48
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 1214 LDSGALSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIAC 1267
+DS L ++ ++L+ AE +LP Y E+E C +P DE + C
Sbjct: 1446 MDSFKLERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC 1505
Query: 1268 Y-QCDEWYHIDCVKL---LSAPEIYICAAC 1293
C++W+H CV + ++ E YIC C
Sbjct: 1506 DGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 77 (32.2 bits), Expect = 9.9e-47, Sum P(4) = 9.9e-47
Identities = 34/165 (20%), Positives = 70/165 (42%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P +L++ + AR +Q+++A L A ++ LE L +R +P+ +
Sbjct: 998 EEIPAYLPNGTVLKDSVQRARDWVQDVDA-LQAGGRVPVLETLIELVARGRSIPVHLNSL 1056
Query: 415 EKLSQRISSAKVWRDSVRKCI--SNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMI 472
+L ++ W++ K N + +E+ + + + L LK + L
Sbjct: 1057 PRLEMLVAEVHAWKECAAKTFLPENSTYSLLEV-LCPRCDIGLLGLKRKQRKLKEPLPS- 1114
Query: 473 GQAESCRARC-SEALRGSMSLKTVELLLQELGDFTVNMPELELLK 516
G+ S + S+ R M K + LG+ + E+E L+
Sbjct: 1115 GKKRSTKLESLSDLERALMESKETAAAMATLGE--ARLREMEALQ 1157
Score = 76 (31.8 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1239 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAPEIYICAACK 1294
EK L ++ M C+C+K MI C C + +H CV + + I++C C+
Sbjct: 1165 EKLLSPVQDLEMKVCLCQKT-PATPMIQCELCRDAFHTSCVAAPSISQSSRIWLCPHCR 1222
Score = 68 (29.0 bits), Expect = 8.5e-46, Sum P(4) = 8.5e-46
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 839 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQQSQKLLSEEMPSAAELQELLDVSF 898
Query: 454 EALDLKIDVPE-TDMLLKMIGQA---ESCRARCSEALRGSMSLKTVELLLQELG 503
E D +++P+ T+M +++ QA E + C ++ S+SL + L+ +LG
Sbjct: 899 E-FD--VELPQLTEMRIRL-EQARWLEEVQQACLDS--SSLSLDDMRRLI-DLG 945
Score = 68 (29.0 bits), Expect = 2.7e-38, Sum P(3) = 2.7e-38
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
++W + ++ LDS +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 917 ARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 974
Query: 1263 A 1263
A
Sbjct: 975 A 975
Score = 61 (26.5 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
+L EL + W D AK ++ SL + + E E +P YL
Sbjct: 960 RLQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYL 1004
Score = 55 (24.4 bits), Expect = 1.4e-45, Sum P(4) = 1.4e-45
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + E++++ C +C +H C+ + + E YIC C
Sbjct: 1492 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRC 1535
Score = 50 (22.7 bits), Expect = 1.6e-40, Sum P(4) = 1.6e-40
Identities = 41/189 (21%), Positives = 72/189 (38%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
+PLP + L++ ++ R+L++ A +A + + E L A + EKL
Sbjct: 1110 EPLPSGKKRSTKLESLSDLERALMESKETA-AAMATLGEARLREMEALQ-SLRFANEEKL 1167
Query: 418 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 476
+ ++ + C+ K PA I +L +A + P + I
Sbjct: 1168 LSPVQDLEM-----KVCLCQKTPATPMIQC--ELCRDAFHTSCVAAPSISQSSR-IWLCP 1219
Query: 477 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 536
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1220 HCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSG 1273
Query: 537 NGRKDQHNV 545
N + Q V
Sbjct: 1274 NLKLVQDQV 1282
Score = 48 (22.0 bits), Expect = 2.8e-42, Sum P(4) = 2.8e-42
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 1221 LDKVFELIAEGENLPVYL 1238
L+ + EL+A G ++PV+L
Sbjct: 1036 LETLIELVARGRSIPVHL 1053
Score = 47 (21.6 bits), Expect = 2.6e-43, Sum P(4) = 2.6e-43
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 724
S W N +L S F+ + L L + +L+ +++ L++SL E EL + +
Sbjct: 1314 SLPDDW-DNRTSYLHSPFSTGQSCLPLHGLSPEVNELLMEAQLLQVSLPEIQELYQTL 1370
Score = 45 (20.9 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 31/144 (21%), Positives = 56/144 (38%)
Query: 294 EAEQFLWAGFEMDAVRDMVNKL---IEGRRWAEGIRD-CLHKAENWSSLPGSDSEKVRLD 349
E ++ L FE D + ++ +E RW E ++ CL SSL D ++
Sbjct: 889 ELQELLDVSFEFDVELPQLTEMRIRLEQARWLEEVQQACLDS----SSLSLDDMRRL--- 941
Query: 350 CVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 409
++ +G P E LQ + + + L A + S S L
Sbjct: 942 -IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRHS--------LSSLAT 992
Query: 410 CIVESEKLSQRISSAKVWRDSVRK 433
+ E E++ + + V +DSV++
Sbjct: 993 AVKEMEEIPAYLPNGTVLKDSVQR 1016
Score = 40 (19.1 bits), Expect = 5.7e-48, Sum P(4) = 5.7e-48
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGT 957
PE + + +++ NW+ R ++++ +
Sbjct: 1247 PEGDALRYMIERTVNWQHRAQQLLSS 1272
Score = 38 (18.4 bits), Expect = 1.6e-40, Sum P(4) = 1.6e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 743 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 786
Score = 38 (18.4 bits), Expect = 1.6e-40, Sum P(4) = 1.6e-40
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 795
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 796 LLRHL-RLVT--QDAEKC 810
Score = 37 (18.1 bits), Expect = 2.8e-42, Sum P(4) = 2.8e-42
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSE 678
E +++ +Q + V LP + E+ + T S ++ ++
Sbjct: 1345 EVNELLMEAQLLQVSLPEIQELYQTLLTKPSSVQQAD 1381
Score = 37 (18.1 bits), Expect = 2.8e-42, Sum P(4) = 2.8e-42
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 646 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 683
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1235 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 453 (164.5 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 92/217 (42%), Positives = 135/217 (62%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 535 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 594
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 595 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 654
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ CI C+ ++SA++C
Sbjct: 655 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCS 709
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K +L YR+TL +LY +
Sbjct: 710 CKPGLLVCLHHVKELCSCPPYKYNLRYRYTLDDLYPM 746
Score = 132 (51.5 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 67/345 (19%), Positives = 144/345 (41%)
Query: 417 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 474
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 750 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 807
Query: 475 -AESCRARCSEALRGSMSLK--------TVELLLQELGDFTVNMPELELLKQYHSDAIFW 525
AE C + + L G + +L + EL F + L +
Sbjct: 808 DAEKCASVAQQLLNGKRQTRYRSGGGKSQSQLTVNELRQFVTQLCALPCVLSQTPLLKDL 867
Query: 526 IARLNDILVNINGR-KDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALK 584
+ R+ D ++ EL +L + +++ L + + L++A E+ +
Sbjct: 868 LNRVEDFQQQSQRLLSEERPRASELQQLLDVSFTFDVELPQLAEMRIRLEQARWLEEVQQ 927
Query: 585 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 639
AC + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 928 ACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRH 987
Query: 640 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 698
+ ++ ++I LP+ +++ + A+ W+++ + A P LE
Sbjct: 988 SLSSLATAVKEMEEIPAYLPNGTVLKDSVQKARDWVQDVDALQAGGRV--PV------LE 1039
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA 741
+L +LV++ + + + L LE +++ W+ A+ LL+++
Sbjct: 1040 TLIELVARGRSIPVHLNSLPRLEMLVSEVHAWKESAAKTFLLENS 1084
Score = 86 (35.3 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 51/265 (19%), Positives = 113/265 (42%)
Query: 797 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 853
HW KA S L P SL + + + E + + ++L +S+ W++ ++ +
Sbjct: 972 HWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYLPNGTVLKDSVQKARDWVQD-VDALQ 1030
Query: 854 APCKFKRCKLSDVEEVLAGCKGINF---SFP---VVIGELTS---AIQKHKLWQEQVHQF 904
A + L + E++A + I S P +++ E+ + + K L + +
Sbjct: 1031 AGGRVP--VLETLIELVARGRSIPVHLNSLPRLEMLVSEVHAWKESAAKTFLLENSPYSL 1088
Query: 905 FNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNS 964
+ C + L L LK P +K +K++ + + ++ E T+ +
Sbjct: 1089 LEVLCPRCDIGL-LGLKRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETA--SAMA 1145
Query: 965 LLGLLQKIKQSVHRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHL 1019
LG + + +SL N+ P V +C+C ++ + + + C C+D +H
Sbjct: 1146 TLGEARLREMEALQSLRFANEEKLLSPAQDVETKVCLCQKTPATPM--IQCELCRDAFHT 1203
Query: 1020 QCLRPTEVDRNHAEAYICPYCQYFE 1044
C+ + + ++ + ++CP+C+ E
Sbjct: 1204 SCVAVSSISQS-SRIWLCPHCRRSE 1227
Score = 83 (34.3 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P +L++ ++AR +Q+++A L A ++ LE L +R +P+ +
Sbjct: 1000 EEIPAYLPNGTVLKDSVQKARDWVQDVDA-LQAGGRVPVLETLIELVARGRSIPVHLNSL 1058
Query: 415 EKLSQRISSAKVWRDSVRK 433
+L +S W++S K
Sbjct: 1059 PRLEMLVSEVHAWKESAAK 1077
Score = 77 (32.2 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 54/246 (21%), Positives = 98/246 (39%)
Query: 526 IARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP--LVEVELKKAHCREKAL 583
+AR I V++N ++ E++ KE A+ +++ P L+EV + L
Sbjct: 1045 VARGRSIPVHLNSLPRLEMLVSEVHA-WKESAAKTFLLENSPYSLLEVLCPRCDIGLLGL 1103
Query: 584 KACDTKM--PLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADI-LIHKAQM 640
K K+ PL ++ + + L L A A E R ++ + +
Sbjct: 1104 KRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETASAMATLGEARLREMEALQSLRF 1163
Query: 641 CEFEDIIRASQDIF--VVL----PSLDEVQNEI---STAKSWLKNSELFLASAFAVAPAS 691
E ++ +QD+ V L P+ +Q E+ + S + S + +S + P
Sbjct: 1164 ANEEKLLSPAQDVETKVCLCQKTPATPMIQCELCRDAFHTSCVAVSSISQSSRIWLCP-H 1222
Query: 692 CSLLR---LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 748
C LE + L++ + +++ L E L +I WQ+ A LL L +D
Sbjct: 1223 CRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKLVQD 1282
Query: 749 DIGDGL 754
G GL
Sbjct: 1283 QAGSGL 1288
Score = 70 (29.7 bits), Expect = 1.9e-47, Sum P(4) = 1.9e-47
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 1219 LSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIACY-QCD 1271
L ++ ++L+ AE +LP Y E+E C +P DE + C C+
Sbjct: 1453 LERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCN 1512
Query: 1272 EWYHIDCVKL---LSAPEIYICAAC 1293
+W+H CV + ++ E YIC C
Sbjct: 1513 QWFHQVCVGVSPEMAEKEDYICVRC 1537
Score = 69 (29.3 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 1239 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYICAACK 1294
EK L + C+C+K MI C C + +H CV + S + I++C C+
Sbjct: 1167 EKLLSPAQDVETKVCLCQKT-PATPMIQCELCRDAFHTSCVAVSSISQSSRIWLCPHCR 1224
Score = 68 (29.0 bits), Expect = 2.7e-38, Sum P(3) = 2.7e-38
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
++W + ++ LDS +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 919 ARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 976
Query: 1263 A 1263
A
Sbjct: 977 A 977
Score = 61 (26.5 bits), Expect = 7.2e-42, Sum P(4) = 7.2e-42
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
+L EL + W D AK ++ SL + + E E +P YL
Sbjct: 962 RLQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYL 1006
Score = 58 (25.5 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 22/111 (19%), Positives = 53/111 (47%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
++EL ++ LP + ++ L ++ + ++ ++ +S + P A E+ L + S
Sbjct: 841 VNELRQFVTQLCALPCVLSQTPLLKDLLNRVEDFQQQSQRLLSEERPRASELQQLLDV-S 899
Query: 454 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELG 503
D+++ + E + L+ E + C ++ S+SL + L+ +LG
Sbjct: 900 FTFDVELPQLAEMRIRLEQARWLEEVQQACLDS--SSLSLDDMRRLI-DLG 947
Score = 55 (24.4 bits), Expect = 6.7e-46, Sum P(4) = 6.7e-46
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 997 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + E++++ C +C +H C+ + + E YIC C
Sbjct: 1494 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRC 1537
Score = 53 (23.7 bits), Expect = 2.6e-40, Sum P(4) = 2.6e-40
Identities = 43/180 (23%), Positives = 67/180 (37%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
DPLP + L++ ++ R+L + A SA + + E L A + EKL
Sbjct: 1112 DPLPSGKKRSTKLESLSDLERALTESKETA-SAMATLGEARLREMEALQ-SLRFANEEKL 1169
Query: 418 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 477
+S A+ V C+ K PA I +L +A + I
Sbjct: 1170 ---LSPAQDVETKV--CLCQKTPATPMIQC--ELCRDAFHTSCVAVSSISQSSRIWLCPH 1222
Query: 478 CRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 537
CR SE L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1223 CRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGN 1276
Score = 50 (22.7 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 668 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 724
S + W N +L S F+ + L L + +L+ +++ L++SL E EL + +
Sbjct: 1316 SLPEDW-DNRTSYLHSPFSTGQSCIPLHGLSPEVNELLMEAQLLQVSLPEVQELYQTL 1372
Score = 48 (22.0 bits), Expect = 1.6e-40, Sum P(4) = 1.6e-40
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 1221 LDKVFELIAEGENLPVYL 1238
L+ + EL+A G ++PV+L
Sbjct: 1038 LETLIELVARGRSIPVHL 1055
Score = 43 (20.2 bits), Expect = 1.1e-42, Sum P(4) = 1.1e-42
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 701
E +++ +Q + V LP + E+ + T S + ++ + V P+S L +
Sbjct: 1347 EVNELLMEAQLLQVSLPEVQELYQTLLTKPSSAQQAD----RSSPVRPSSEKNDCLRGKR 1402
Query: 702 DLVSQSKFLKISLKEQTELEKVINNCERW 730
D ++ L+ LK + E E + + ERW
Sbjct: 1403 DAINS---LERKLKRRPEREGLPS--ERW 1426
Score = 43 (20.2 bits), Expect = 4.5e-42, Sum P(4) = 4.5e-42
Identities = 32/144 (22%), Positives = 55/144 (38%)
Query: 294 EAEQFLWAGFEMDAVRDMVNKL---IEGRRWAEGIRD-CLHKAENWSSLPGSDSEKVRLD 349
E +Q L F D + ++ +E RW E ++ CL SSL D ++
Sbjct: 891 ELQQLLDVSFTFDVELPQLAEMRIRLEQARWLEEVQQACLDS----SSLSLDDMRRL--- 943
Query: 350 CVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 409
++ +G P E LQ + + + L A + S S L
Sbjct: 944 -IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRHS--------LSSLAT 994
Query: 410 CIVESEKLSQRISSAKVWRDSVRK 433
+ E E++ + + V +DSV+K
Sbjct: 995 AVKEMEEIPAYLPNGTVLKDSVQK 1018
Score = 40 (19.1 bits), Expect = 1.9e-47, Sum P(4) = 1.9e-47
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGT 957
PE + + +++ NW+ R ++++ +
Sbjct: 1249 PEGDALRYMIERTVNWQHRAQQLLSS 1274
Score = 38 (18.4 bits), Expect = 1.7e-42, Sum P(4) = 1.7e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 739 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 797
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 798 LLRHL-RLVT--QDAEKC 812
Score = 38 (18.4 bits), Expect = 8.4e-40, Sum P(4) = 8.4e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 745 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 788
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 461 (167.3 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 99/224 (44%), Positives = 138/224 (61%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVP+Y Q G FVITFPRSYH+GFN
Sbjct: 538 VMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQ 597
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DW+P G D Y+Q H+ V SH+E++C +A K+D LD ++ ++
Sbjct: 598 GFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKADCLDVVLASAVQ 657
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCP--EY-VGTEEDPTCIICRQYLYLSAV 182
+++ + +ER RE++ RK MG +C +Y + +++ C+ CR YLSA+
Sbjct: 658 KDMQLMIKEERELREKV-RK-------MGVAQCELFQYDLLADDERQCVKCRTTCYLSAL 709
Query: 183 ACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C CRP VCL H LC C L YR TL +LY + V
Sbjct: 710 TCPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPMMNAV 753
Score = 113 (44.8 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 74/346 (21%), Positives = 146/346 (42%)
Query: 419 QRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ-A 475
QR W V + + K + V L E+ + PE D+L L+++ Q A
Sbjct: 755 QRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQSF--PENDLLRQLRLVTQDA 812
Query: 476 ESCRARCSEALRGSMSLK--------TVELLLQELGDFT---VNMP----ELELLKQYHS 520
E C + + L G + +L ++E+ F N+P + LLK+
Sbjct: 813 EKCSSVAQQLLNGKRQTRYRTGKAKSPNQLTVEEMRSFVRQLYNLPCSLTQAPLLKEL-L 871
Query: 521 DAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE 580
++I + ++ L++ D + E+ +L+EG+ + + +LPL+ L++A
Sbjct: 872 NSIEDFQQHSEKLLSDEVSAD---AVSEIESLLEEGSQFDVFLPELPLLRERLEQARWLT 928
Query: 581 KALKACDTK-----MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADI 633
+A D + L+ +R++ V L E++ L +L + EE A +
Sbjct: 929 GVHQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENAQAL 988
Query: 634 LIHKAQMCE-FEDI---IRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 689
L KA+ E E + + + + LP+ +Q+ ++ AK WL+ +E P
Sbjct: 989 L--KARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGG--QVP 1044
Query: 690 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 735
SL D+V ++ + + L+ +LE ++ + W+ A+
Sbjct: 1045 V------FSSLSDMVLRAHSIPVRLEPLDQLEVQVSEVQSWKETAA 1084
Score = 87 (35.7 bits), Expect = 7.0e-46, Sum P(4) = 7.0e-46
Identities = 95/445 (21%), Positives = 176/445 (39%)
Query: 248 NRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYG---TLLREAEQFLWAGFE 304
N P +LT+ + S +E + S K+L S+DA +LL E QF E
Sbjct: 856 NLPCSLTQAPLLKELLNS--IEDFQQHSEKLLSDEVSADAVSEIESLLEEGSQFDVFLPE 913
Query: 305 MDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLP-GSDSEKVRLDCVNELLGFDPLPCN 363
+ +R+ +E RW G+ H+AE+ + P G E +R ++ +G P P
Sbjct: 914 LPLLRER----LEQARWLTGV----HQAEDPVANPCGLSLESMRR-LIDRGVGLTPHPSI 964
Query: 364 EPGHLILQNYAEEARSLIQEINAALSACSKISELELLYS---RASGLPICIVESEKLSQR 420
E LQ + L + A L A S LE L S + G+P + L
Sbjct: 965 ERMMARLQELLTVSEELEENAQALLKARPPES-LETLCSMLTQVEGVPAYLPNCLLLQDT 1023
Query: 421 ISSAKVWRDSVRKC-ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCR 479
++ AK W + + P + + L + ++ ++++ P D L + + +S +
Sbjct: 1024 VNRAKEWLQEAESLQVGGQVPVFSSLSDMV-LRAHSIPVRLE-P-LDQLEVQVSEVQSWK 1080
Query: 480 ARCSEA-LRGSMSLKTVELLLQ--ELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 536
++ L S +E+L E+G ++ ++ +K D + + V +
Sbjct: 1081 ETAAKTFLIKSSPFTLLEVLCPRWEMGS-SLKKKKMRKMK---GDCV---SSGKKKFVKL 1133
Query: 537 NGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELK---KAHCREKALKACDTKMPLD 593
+ D + + K+ AS + ++ L E+E +A K L D
Sbjct: 1134 DSMSDVERALSDS----KDSASAMFTLAEVRLKELESLCSLRASNESKLLPTADCASLKV 1189
Query: 594 FIRQVTAEAVILQIE--REKLF-IDLSGVLAAAMRWEERAADILIH--KAQMCEFEDIIR 648
+ Q A +LQ E R+ + + G + + E + + K + + ++
Sbjct: 1190 CVCQKPAMGAMLQCELCRDAFHSVCVRGP-SDPLDPEAWLCPLCLRSTKPPLDKIRSLLS 1248
Query: 649 ASQDIFVVLPSLDEVQNEISTAKSW 673
+ Q I V LP D ++ I + SW
Sbjct: 1249 SLQRIRVRLPEGDALRYMIERSVSW 1273
Score = 85 (35.0 bits), Expect = 3.2e-47, Sum P(4) = 3.2e-47
Identities = 63/265 (23%), Positives = 109/265 (41%)
Query: 800 KKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVK-WLKRA--LEVISA 854
+ A + L P SLE + S++ EG+ + +L ++ K WL+ A L+V
Sbjct: 983 ENAQALLKARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGGQ 1042
Query: 855 PCKFKRCKLSDVEEVLAGCKGINFSFPV---VIGELTSAIQKHKLWQEQVHQFFNLK--- 908
F LSD+ VL S PV + +L + + + W+E + F +K
Sbjct: 1043 VPVFS--SLSDM--VLRA-----HSIPVRLEPLDQLEVQVSEVQSWKETAAKTFLIKSSP 1093
Query: 909 -------CAQQSWSLMLQLKELGEAAAFDCPEL-EKVLSKVDKVENWKQRCKEIVGTSVG 960
C + L+ K++ + DC +K K+D + + +R S
Sbjct: 1094 FTLLEVLCPRWEMGSSLKKKKMRKMKG-DCVSSGKKKFVKLDSMSD-VERALSDSKDSAS 1151
Query: 961 DKNSLLGLLQKIKQSVHRSLYIYNK----PHGS-VSMTLCMCCESDSKELEFLICSACKD 1015
+L + K +S+ SL N+ P S+ +C+C + + L C C+D
Sbjct: 1152 AMFTLAEVRLKELESLC-SLRASNESKLLPTADCASLKVCVCQKPAMGAM--LQCELCRD 1208
Query: 1016 CYHLQCLRPTEVDRNHAEAYICPYC 1040
+H C+R D EA++CP C
Sbjct: 1209 AFHSVCVRGPS-DPLDPEAWLCPLC 1232
Score = 79 (32.9 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1240 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---EIYICAAC 1293
K L + S+ C+C+KP AM+ C C + +H CV+ S P E ++C C
Sbjct: 1177 KLLPTADCASLKVCVCQKPA-MGAMLQCELCRDAFHSVCVRGPSDPLDPEAWLCPLC 1232
Score = 79 (32.9 bits), Expect = 1.5e-47, Sum P(4) = 1.5e-47
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 1255 CRKPYDEKA-MIACYQCDEWYHIDCVKL---LSAPEIYICAAC 1293
C +P E+ + C C+ W+H+ CV + L+A E Y+C +C
Sbjct: 1471 CLQPEGEEVDWVQCDCCNRWFHMICVGVSAELAAEEDYMCVSC 1513
Score = 71 (30.1 bits), Expect = 1.0e-46, Sum P(4) = 1.0e-46
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 992 MTLC---MCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
MTLC C + + +E++++ C C +H+ C+ + E Y+C C
Sbjct: 1463 MTLCPAESCLQPEGEEVDWVQCDCCNRWFHMICVG-VSAELAAEEDYMCVSC 1513
Score = 67 (28.6 bits), Expect = 3.2e-47, Sum P(4) = 3.2e-47
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 740
L +E ++ V Q L SL + L++++N+ E +Q H+ LL D
Sbjct: 842 LTVEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSD 887
Score = 53 (23.7 bits), Expect = 8.9e-46, Sum P(4) = 8.9e-46
Identities = 16/82 (19%), Positives = 38/82 (46%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ E+ + LP + ++ L + ++S + ++ K +S++ A ++ LE
Sbjct: 844 VEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSDEVSADAVSEIESLLE- 902
Query: 454 EALDLKIDVPETDMLLKMIGQA 475
E + +PE +L + + QA
Sbjct: 903 EGSQFDVFLPELPLLRERLEQA 924
Score = 52 (23.4 bits), Expect = 7.0e-46, Sum P(4) = 7.0e-46
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 756
L+ ++ L+S + +++ L E L +I WQ ++ D+ L G G S
Sbjct: 1240 LDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI-DSYGLSSTSQDGRGASP 1298
Query: 757 S 757
S
Sbjct: 1299 S 1299
Score = 50 (22.7 bits), Expect = 3.7e-42, Sum P(4) = 3.7e-42
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 482 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 533
C LR + L + LL L V +PE + L+ ++ W R+ +++
Sbjct: 1229 CPLCLRSTKPPLDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI 1281
Score = 46 (21.3 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 445 IDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEAL 486
+D + L S +++ +PE D L MI ++ S + R E +
Sbjct: 1240 LDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI 1281
Score = 45 (20.9 bits), Expect = 4.3e-43, Sum P(4) = 4.3e-43
Identities = 15/89 (16%), Positives = 39/89 (43%)
Query: 1154 WRVRVSKLLEGLTKP---TIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVA 1209
W V + + + P ++ ++ + G+ + P + +L EL + + + A
Sbjct: 926 WLTGVHQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENA 985
Query: 1210 KKVVLDSGALSLDKVFELIAEGENLPVYL 1238
+ ++ SL+ + ++ + E +P YL
Sbjct: 986 QALLKARPPESLETLCSMLTQVEGVPAYL 1014
Score = 45 (20.9 bits), Expect = 2.2e-41, Sum P(5) = 2.2e-41
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 737
LE+L +++Q + + L L+ +N + W A SL
Sbjct: 997 LETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESL 1037
Score = 44 (20.5 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 448 LYKLESEALDLKIDVPETDMLLKMI 472
L +L E L L++ +PET L +++
Sbjct: 1350 LEELMVEGLVLQVSLPETQQLYRLL 1374
Score = 43 (20.2 bits), Expect = 2.0e-41, Sum P(4) = 2.0e-41
Identities = 27/142 (19%), Positives = 61/142 (42%)
Query: 588 TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDII 647
TK PLD IR + + +++ + L ++ ++ W+ R +++ +D
Sbjct: 1236 TKPPLDKIRSLLSSLQRIRVRLPEGDA-LRYMIERSVSWQRRVREVIDSYGLSSTSQDGR 1294
Query: 648 RAS--QDIFVVLPSLDEVQ--NEISTAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKD 702
AS Q+++ ++Q S + W + + + F L L L++
Sbjct: 1295 GASPSQNLYRSTGHSRKLQLCGSPSRCQDWAVSGQE--QTVFYTEQRCIPLQGLSPELEE 1352
Query: 703 LVSQSKFLKISLKEQTELEKVI 724
L+ + L++SL E +L +++
Sbjct: 1353 LMVEGLVLQVSLPETQQLYRLL 1374
Score = 42 (19.8 bits), Expect = 1.5e-47, Sum P(4) = 1.5e-47
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 979
PE + + +++ +W++R +E++ + S G Q+++RS
Sbjct: 1258 PEGDALRYMIERSVSWQRRVREVIDSYGLSSTSQDGRGASPSQNLYRS 1305
Score = 40 (19.1 bits), Expect = 2.7e-40, Sum P(4) = 2.7e-40
Identities = 8/48 (16%), Positives = 22/48 (45%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 979
P + V + + ++W R E++ + K ++ +++S +S
Sbjct: 748 PMMNAVRQRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQS 795
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 441 (160.3 bits), Expect = 3.9e-48, Sum P(3) = 3.9e-48
Identities = 93/215 (43%), Positives = 134/215 (62%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 496 EVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 555
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 556 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAV 615
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KG+ ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 616 HKEMFIMVQEERRLRKALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 670
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
P VCL H LC+C + + +L YR+TL EL
Sbjct: 671 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 705
Score = 149 (57.5 bits), Expect = 3.9e-48, Sum P(3) = 3.9e-48
Identities = 82/383 (21%), Positives = 159/383 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 680 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 735
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGS-------- 489
+ L LESEA + + P +++L ++ + + E+C A+ + G
Sbjct: 736 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 793
Query: 490 MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDEL 549
++L + +LL+++G M ++ +K + A + L + L
Sbjct: 794 LTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGL------L 847
Query: 550 NCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLD--FIRQ---VTAEAVI 604
+L+ G L ++V + ++ ++++A ++ +A I Q V +
Sbjct: 848 RSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIA 907
Query: 605 LQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDE 662
+K +L +L A RWEE+A L K E IIR +++I V LP++
Sbjct: 908 SSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQA 967
Query: 663 VQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 721
++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 968 LKEALTKAQAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLE 1018
Query: 722 KVINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1019 LQVLTAHSWREKASKTFLKKNSC 1041
Score = 147 (56.8 bits), Expect = 8.0e-48, Sum P(4) = 8.0e-48
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I +++ E+ + E AL+ S L L R L + + E+ +
Sbjct: 809 LPCAM--HQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQ 866
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L Q++ A+ W D V++ ++ ++ I +L A +D ++ LL +
Sbjct: 867 LQQQVEQAQ-WLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTI 925
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 926 AERWEEKAHFCLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDE 984
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 985 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1033
Score = 71 (30.1 bits), Expect = 5.8e-40, Sum P(4) = 5.8e-40
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 264 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTL-LREAEQFLWAGF----EMDAVRDMVNKLI 316
+ Q VEQ WL +V Q L S G+L + + + A +D R + +L+
Sbjct: 867 LQQQVEQAQWLD---EVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELL 923
Query: 317 E-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAE 375
RW E CL + P + E + + N +P + P L+
Sbjct: 924 TIAERWEEKAHFCLEARQKH---PPATLEAIIRETEN-------IPVHLPNIQALKEALT 973
Query: 376 EARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK 433
+A++ I +++ + + +LE L + LP+ + E +L ++ +A WR+ K
Sbjct: 974 KAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1033
Query: 434 CI--SNKCPAAIEI 445
N C +E+
Sbjct: 1034 TFLKKNSCYTLLEV 1047
Score = 63 (27.2 bits), Expect = 3.9e-48, Sum P(3) = 3.9e-48
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1244 SLRARSML-YCICRKPYDEKAMIACYQCDEWYHIDCVK---LLSAPE 1286
SL A S C+C + ++ C C +W+H CV LL++P+
Sbjct: 1124 SLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1170
Score = 61 (26.5 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1173 IQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAE 1230
+Q L G + SP D R +L EL I +W + A L++ E +I E
Sbjct: 896 MQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIRE 954
Query: 1231 GENLPVYL 1238
EN+PV+L
Sbjct: 955 TENIPVHL 962
Score = 58 (25.5 bits), Expect = 4.9e-48, Sum P(4) = 4.9e-48
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 954 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1013
IV G++ G+LQ + + + + S ++C+C + + + L C C
Sbjct: 1093 IVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAG-VGVLQCDLC 1151
Query: 1014 KDCYHLQCL 1022
+D +H QC+
Sbjct: 1152 QDWFHGQCV 1160
Score = 58 (25.5 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 884 IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDK 943
IG++ +++ + +Q + + L S L+ L E G+ + PE ++ +V++
Sbjct: 816 IGDVKDVLEQVEAYQAEAREA--LATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQ 873
Query: 944 VENWKQRCKEIVGTSVGDKNSLL---GLL 969
+ W K+ + S + SL+ GLL
Sbjct: 874 AQ-WLDEVKQALAPSA-HRGSLVIMQGLL 900
Score = 52 (23.4 bits), Expect = 4.9e-48, Sum P(4) = 4.9e-48
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 1161 LLEG-LTKPTIGQIQNYLKEGLLMNISPKDHYR-QKLMELNRIGSQWADVAKKVVLDSGA 1218
++EG L + T+ + N+ LL P D R + L+EL + Q + + A
Sbjct: 1346 MMEGDLLEVTLDE--NHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSR------A 1397
Query: 1219 LSLDKVFELIAEGENLPVYLEKELKSLRARS--MLYCICRKP--YDEKA 1263
L + + + +G N+ +++EL+S RARS ++ + R+ Y EKA
Sbjct: 1398 LERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKA 1446
Score = 51 (23.0 bits), Expect = 6.7e-38, Sum P(4) = 6.7e-38
Identities = 46/212 (21%), Positives = 79/212 (37%)
Query: 769 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLMA----V 821
+ S G LG + E +LQ W K+AL+ + SL ++ L+ +
Sbjct: 847 LRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKI 906
Query: 822 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 881
A S + L L +W ++A + A K L E ++ + I P
Sbjct: 907 ASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATL---EAIIRETENIPVHLP 963
Query: 882 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 938
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 964 N-IQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1018
Query: 939 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 970
+V +W+++ + T + KNS LL+
Sbjct: 1019 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1046
Score = 48 (22.0 bits), Expect = 6.2e-39, Sum P(4) = 6.2e-39
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNC 551
L+T+ LL L V +PE E L+ AI W R L + +++
Sbjct: 1201 LETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALAS-----------EDVTA 1249
Query: 552 ILKEGASLRIQVDDLPLVE 570
+L++ A LR Q+ P E
Sbjct: 1250 LLRQLAELRQQLQAKPRPE 1268
Score = 48 (22.0 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 994 LDDLEGLVAVGRDLPVGLE-ELRQL 1017
Score = 48 (22.0 bits), Expect = 4.8e-36, Sum P(4) = 4.8e-36
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 407 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 443
LP+ + E E L A W+D RK ++++ A+
Sbjct: 1214 LPVRLPEGEALQCLTERAIGWQDRARKALASEDVTAL 1250
Score = 45 (20.9 bits), Expect = 1.8e-46, Sum P(4) = 1.8e-46
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 745
RLE++ L+ + L + L E L+ + WQ+ A L +D LL
Sbjct: 1200 RLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALL 1251
Score = 43 (20.2 bits), Expect = 4.8e-36, Sum P(4) = 4.8e-36
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 350 CVNELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASG 406
C ELLG +PG +I+ + +E ++Q + SA K S L +S
Sbjct: 1074 CDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLAPSLMASSP 1130
Query: 407 LPICI 411
IC+
Sbjct: 1131 TSICV 1135
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 441 (160.3 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 93/215 (43%), Positives = 134/215 (62%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 537 EVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 596
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 597 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAV 656
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KG+ ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 657 HKEMFIMVQEERRLRKALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 711
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
P VCL H LC+C + + +L YR+TL EL
Sbjct: 712 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 746
Score = 149 (57.5 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 82/383 (21%), Positives = 159/383 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 721 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 776
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGS-------- 489
+ L LESEA + + P +++L ++ + + E+C A+ + G
Sbjct: 777 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 834
Query: 490 MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDEL 549
++L + +LL+++G M ++ +K + A + L + L
Sbjct: 835 LTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGL------L 888
Query: 550 NCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLD--FIRQ---VTAEAVI 604
+L+ G L ++V + ++ ++++A ++ +A I Q V +
Sbjct: 889 RSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIA 948
Query: 605 LQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDE 662
+K +L +L A RWEE+A L K E IIR +++I V LP++
Sbjct: 949 SSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQA 1008
Query: 663 VQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 721
++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1009 LKEALTKAQAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLE 1059
Query: 722 KVINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1060 LQVLTAHSWREKASKTFLKKNSC 1082
Score = 147 (56.8 bits), Expect = 1.0e-47, Sum P(4) = 1.0e-47
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I +++ E+ + E AL+ S L L R L + + E+ +
Sbjct: 850 LPCAM--HQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQ 907
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L Q++ A+ W D V++ ++ ++ I +L A +D ++ LL +
Sbjct: 908 LQQQVEQAQ-WLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTI 966
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 967 AERWEEKAHFCLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDE 1025
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1026 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1074
Score = 71 (30.1 bits), Expect = 7.5e-40, Sum P(4) = 7.5e-40
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 264 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTL-LREAEQFLWAGF----EMDAVRDMVNKLI 316
+ Q VEQ WL +V Q L S G+L + + + A +D R + +L+
Sbjct: 908 LQQQVEQAQWLD---EVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELL 964
Query: 317 E-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAE 375
RW E CL + P + E + + N +P + P L+
Sbjct: 965 TIAERWEEKAHFCLEARQKH---PPATLEAIIRETEN-------IPVHLPNIQALKEALT 1014
Query: 376 EARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK 433
+A++ I +++ + + +LE L + LP+ + E +L ++ +A WR+ K
Sbjct: 1015 KAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1074
Query: 434 CI--SNKCPAAIEI 445
N C +E+
Sbjct: 1075 TFLKKNSCYTLLEV 1088
Score = 63 (27.2 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1244 SLRARSML-YCICRKPYDEKAMIACYQCDEWYHIDCVK---LLSAPE 1286
SL A S C+C + ++ C C +W+H CV LL++P+
Sbjct: 1165 SLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1211
Score = 61 (26.5 bits), Expect = 5.9e-40, Sum P(4) = 5.9e-40
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1173 IQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAE 1230
+Q L G + SP D R +L EL I +W + A L++ E +I E
Sbjct: 937 MQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIRE 995
Query: 1231 GENLPVYL 1238
EN+PV+L
Sbjct: 996 TENIPVHL 1003
Score = 58 (25.5 bits), Expect = 6.5e-48, Sum P(4) = 6.5e-48
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 954 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1013
IV G++ G+LQ + + + + S ++C+C + + + L C C
Sbjct: 1134 IVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAG-VGVLQCDLC 1192
Query: 1014 KDCYHLQCL 1022
+D +H QC+
Sbjct: 1193 QDWFHGQCV 1201
Score = 58 (25.5 bits), Expect = 5.9e-40, Sum P(4) = 5.9e-40
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 884 IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDK 943
IG++ +++ + +Q + + L S L+ L E G+ + PE ++ +V++
Sbjct: 857 IGDVKDVLEQVEAYQAEAREA--LATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQ 914
Query: 944 VENWKQRCKEIVGTSVGDKNSLL---GLL 969
+ W K+ + S + SL+ GLL
Sbjct: 915 AQ-WLDEVKQALAPSA-HRGSLVIMQGLL 941
Score = 52 (23.4 bits), Expect = 6.5e-48, Sum P(4) = 6.5e-48
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 1161 LLEG-LTKPTIGQIQNYLKEGLLMNISPKDHYR-QKLMELNRIGSQWADVAKKVVLDSGA 1218
++EG L + T+ + N+ LL P D R + L+EL + Q + + A
Sbjct: 1387 MMEGDLLEVTLDE--NHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSR------A 1438
Query: 1219 LSLDKVFELIAEGENLPVYLEKELKSLRARS--MLYCICRKP--YDEKA 1263
L + + + +G N+ +++EL+S RARS ++ + R+ Y EKA
Sbjct: 1439 LERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKA 1487
Score = 51 (23.0 bits), Expect = 8.7e-38, Sum P(4) = 8.7e-38
Identities = 46/212 (21%), Positives = 79/212 (37%)
Query: 769 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLMA----V 821
+ S G LG + E +LQ W K+AL+ + SL ++ L+ +
Sbjct: 888 LRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKI 947
Query: 822 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 881
A S + L L +W ++A + A K L E ++ + I P
Sbjct: 948 ASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATL---EAIIRETENIPVHLP 1004
Query: 882 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 938
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1005 N-IQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1059
Query: 939 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 970
+V +W+++ + T + KNS LL+
Sbjct: 1060 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1087
Score = 48 (22.0 bits), Expect = 8.1e-39, Sum P(4) = 8.1e-39
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNC 551
L+T+ LL L V +PE E L+ AI W R L + +++
Sbjct: 1242 LETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALAS-----------EDVTA 1290
Query: 552 ILKEGASLRIQVDDLPLVE 570
+L++ A LR Q+ P E
Sbjct: 1291 LLRQLAELRQQLQAKPRPE 1309
Score = 48 (22.0 bits), Expect = 1.3e-38, Sum P(4) = 1.3e-38
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1035 LDDLEGLVAVGRDLPVGLE-ELRQL 1058
Score = 48 (22.0 bits), Expect = 6.2e-36, Sum P(4) = 6.2e-36
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 407 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 443
LP+ + E E L A W+D RK ++++ A+
Sbjct: 1255 LPVRLPEGEALQCLTERAIGWQDRARKALASEDVTAL 1291
Score = 45 (20.9 bits), Expect = 2.3e-46, Sum P(4) = 2.3e-46
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 745
RLE++ L+ + L + L E L+ + WQ+ A L +D LL
Sbjct: 1241 RLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALL 1292
Score = 43 (20.2 bits), Expect = 6.2e-36, Sum P(4) = 6.2e-36
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 350 CVNELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASG 406
C ELLG +PG +I+ + +E ++Q + SA K S L +S
Sbjct: 1115 CDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLAPSLMASSP 1171
Query: 407 LPICI 411
IC+
Sbjct: 1172 TSICV 1176
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 428 (155.7 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 94/222 (42%), Positives = 131/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C + L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 148 (57.2 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 96/409 (23%), Positives = 181/409 (44%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 524
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 525 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 578
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 579 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 634
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 635 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 692
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 693 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD--- 746
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLS 1075
Query: 747 -KDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHE-ISELQNA 792
+ DIG G + K++++I E + L D E + E ++A
Sbjct: 1076 PRTDIGVYGSGKNRRKKVKEIIEK-EKEKDLDLEPLSDLEEGLEETRDA 1123
Score = 78 (32.5 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1300
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDS 1666
Score = 77 (32.2 bits), Expect = 8.3e-48, Sum P(3) = 8.3e-48
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNGCVPL 1191
Score = 77 (32.2 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 66 (28.3 bits), Expect = 1.6e-39, Sum P(4) = 1.6e-39
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1322 SPKHT 1326
S HT
Sbjct: 1067 S--HT 1069
Score = 56 (24.8 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 79/385 (20%), Positives = 146/385 (37%)
Query: 370 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 424
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ W + + C+ + P + L + +EA ++ +P L + + +A A+
Sbjct: 953 ERWEEKAKVCLQAR-PRHSMAN-LENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEA 1010
Query: 485 ALRGS--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 542
GS L+ +E L + V + L ++ + A W R + N
Sbjct: 1011 IQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTL 1070
Query: 543 HNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA 600
V+ I G + R +V ++ +E E +K E D + L+ R
Sbjct: 1071 LQVLSPRTDIGVYGSGKNRRKKVKEI--IEKEKEKDLDLEPL---SDLEEGLEETRDAAM 1125
Query: 601 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL 660
+ + ERE+ I+ L AA + D I + + C I R + F++ L
Sbjct: 1126 VVAVFK-EREQKEIEAMHSLRAANLAKMTIVD-RIEEVKFC----ICRKTASGFMLQCEL 1179
Query: 661 --DEVQN---EISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKIS 713
D N + + S K S + P R LE++ L+ + L +
Sbjct: 1180 CKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLPVR 1239
Query: 714 LKEQTELEKVINNCERWQNHASSLL 738
L E L+ + WQ+ A L
Sbjct: 1240 LPEGEALQCLTERAMSWQDRARQAL 1264
Score = 50 (22.7 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1040
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLC 1215
Score = 47 (21.6 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 3.5e-47, Sum P(4) = 3.5e-47
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 915 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 42 (19.8 bits), Expect = 4.6e-37, Sum P(4) = 4.6e-37
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 888
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 889 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 936
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 9.4e-37, Sum P(4) = 9.4e-37
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 930 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 978
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 39 (18.8 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 47/245 (19%), Positives = 97/245 (39%)
Query: 786 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 841
++ELQ + W +KA L P S+ ++E+++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 842 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 901
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1057
Query: 902 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGD 961
+ F LK S +L+ L + + + + KV ++ K++ K++ + D
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRR--KKVKEIIE-KEKEKDLDLEPLSD 1112
Query: 962 KNSLLGLLQKIKQSV----HRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1016
L + V R H + L D +E++F IC
Sbjct: 1113 LEEGLEETRDAAMVVAVFKEREQKEIEAMHSLRAANLAKMTIVDRIEEVKFCICRKTASG 1172
Query: 1017 YHLQC 1021
+ LQC
Sbjct: 1173 FMLQC 1177
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 429 (156.1 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 98/252 (38%), Positives = 138/252 (54%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F + M+ + P+LF +QPDLL QLVT++NP++L+ N VPV+ Q G FVITFPR+YHAG
Sbjct: 668 FEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAG 727
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSP 122
FN G N AEAVNFAPADWL G + Y + V SH+EL+C +A + L ++
Sbjct: 728 FNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIAT 787
Query: 123 YLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAV 182
++ + E+ R+ L G+ ++ R+ E V +E C C +LSAV
Sbjct: 788 ACYIDMAEMVDTEKKLRKSLLEWGVTRAE----RRAFELVNDDERH-CQECNTTCFLSAV 842
Query: 183 ACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRR 242
AC C VCL H+ LC C K L+YR+TL E+ L L + R
Sbjct: 843 ACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEM-PLMLQKLKVKAHSFERWLSRCR 901
Query: 243 QISSSNRPTTLT 254
I ++ PT++T
Sbjct: 902 DIVDAHTPTSVT 913
Score = 150 (57.9 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 75/351 (21%), Positives = 153/351 (43%)
Query: 415 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 474
+KL + S + W R + P ++ + L +L EA K P + +L+ +
Sbjct: 884 QKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKF--PSS-LLIDRLNA 940
Query: 475 AESCRARCSEALR--GSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWI---ARL 529
A +C ++ G ++T QE + + M ELEL Q + I A +
Sbjct: 941 AAVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV 1000
Query: 530 NDILVN----INGRKDQHNVI------DELNCILKEGASLRIQVDDLPLVEVELK--KAH 577
++LV + + Q + EL ++ EG+SLRI++ L L++ LK K +
Sbjct: 1001 RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLLQKRLKQCKWY 1060
Query: 578 CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFID-----LSGVLAAAMRWEERAAD 632
R + L+ +K+ ++ + A ++ ++D L + A WE +AA
Sbjct: 1061 KRSQGLRETSSKLTYQDVKNLLHIAAA-DLDPTDPYVDKEMRKLQQIGADIEAWESQAAK 1119
Query: 633 I---LIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 689
L + ++ E E ++++ DI +PS +++ + A+ WL+ E +
Sbjct: 1120 YFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTY- 1178
Query: 690 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ-NHASSLLQ 739
C +L+ ++ + + I L+E + ++ +N+ +W+ N A + L+
Sbjct: 1179 --C-----HTLEAMIERGLNIPIQLEELSRMQGHLNSAHQWKDNTACAFLK 1222
Score = 99 (39.9 bits), Expect = 4.1e-42, Sum P(4) = 4.1e-42
Identities = 61/229 (26%), Positives = 100/229 (43%)
Query: 368 LIL-QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKV 426
L+L + + E + S +Q +L + + SELE L + S L I + + + L +R+ K
Sbjct: 1004 LVLGKQFVERSESQLQ---LSLESLEE-SELETLINEGSSLRIELQQLDLLQKRLKQCKW 1059
Query: 427 WRDS--VRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDM---LLKMIG---QA-ES 477
++ S +R+ S+K DV L A DL P D L+ IG +A ES
Sbjct: 1060 YKRSQGLRET-SSKLTYQ---DVKNLLHIAAADLDPTDPYVDKEMRKLQQIGADIEAWES 1115
Query: 478 CRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 537
A+ L L +E L+ D +P LLK A W+ + + N N
Sbjct: 1116 QAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQN-N 1174
Query: 538 GRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKAC 586
H L +++ G ++ IQ+++L ++ L AH + K AC
Sbjct: 1175 HVTYCHT----LEAMIERGLNIPIQLEELSRMQGHLNSAH-QWKDNTAC 1218
Score = 90 (36.7 bits), Expect = 4.4e-41, Sum P(4) = 4.4e-41
Identities = 71/324 (21%), Positives = 131/324 (40%)
Query: 645 DIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELF-LASAFAVAPASC-------SLLR 696
DI+ A V L L E+ E T K +S L +A AV C + +
Sbjct: 902 DIVDAHTPTSVTLQELQELCKEAETKK--FPSSLLIDRLNAAAVEAEKCVTVIQQLGINK 959
Query: 697 LESLKDLVSQSKFLKISLKE-QTELEKVINNCERWQNHAS--SLLQDARCLLDKDDIGDG 753
+ + D ++ K++++E + ++++ N C AS LL + +++ +
Sbjct: 960 VRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERSE--SQ 1017
Query: 754 LSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSL- 812
L SL S +E+ + +E+ N G SL + ++ LQ W K++ S L
Sbjct: 1018 LQLSLES-LEE--SELETLINEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLT 1074
Query: 813 -EDVESLMAVAEG-LSTRCFSSMLWNSLIHGVKWLKRALEVI-SAPCK-FKRC----KLS 864
+DV++L+ +A L + + + ++ + +E S K F+R +L
Sbjct: 1075 YQDVKNLLHIAAADLDP---TDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHELG 1131
Query: 865 DVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELG 924
++E+ L IN P G L A++K + W V Q +L + E G
Sbjct: 1132 EIEQFLKSASDINGQVPSH-GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMI-ERG 1189
Query: 925 EAAAFDCPELEKVLSKVDKVENWK 948
EL ++ ++ WK
Sbjct: 1190 LNIPIQLEELSRMQGHLNSAHQWK 1213
Score = 88 (36.0 bits), Expect = 7.1e-41, Sum P(4) = 7.1e-41
Identities = 59/273 (21%), Positives = 112/273 (41%)
Query: 394 ISELELLYSRASGLPICIV-ESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLE 452
+ ELEL L CI+ E + + + K + + + + +E L L
Sbjct: 977 MEELELFVQEIDNL-CCIIDEGASVRELLVLGKQFVERSESQLQLSLES-LEESELETLI 1034
Query: 453 SEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVE----LLLQELGDFTVN 508
+E L+I++ + D+L K + Q + + S+ LR + S T + LL D
Sbjct: 1035 NEGSSLRIELQQLDLLQKRLKQCKWYKR--SQGLRETSSKLTYQDVKNLLHIAAADLDPT 1092
Query: 509 MP----ELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVD 564
P E+ L+Q +D W ++ + QH + E+ LK + + QV
Sbjct: 1093 DPYVDKEMRKLQQIGADIEAWESQAAKYFRRLT---QQHE-LGEIEQFLKSASDINGQVP 1148
Query: 565 DLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVI-----LQIEREKLFIDLSGV 619
L++ L+KA +A++ + + T EA+I + I+ E+L + G
Sbjct: 1149 SHGLLKDALRKAREWLRAVEQLQQNNHVTYCH--TLEAMIERGLNIPIQLEELS-RMQGH 1205
Query: 620 LAAAMRWEERAADILIHKAQMCEFEDIIRASQD 652
L +A +W++ A + K +++ D
Sbjct: 1206 LNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSD 1238
Score = 77 (32.2 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 1229 AEGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA 1284
AE + L E +++ M ++C+C+ + M C C +W+H DCV SA
Sbjct: 1270 AEEQELLDMRELRRQNMNKNPMRDMFCLCKSEF-RNLMFNCQLCRDWFHEDCVPPPSA 1326
Score = 74 (31.1 bits), Expect = 9.3e-40, Sum P(5) = 9.3e-40
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 365 PGHLILQNYAEEARSLIQEINAALSACSKIS---ELELLYSRASGLPICIVESEKLSQRI 421
P H +L++ +AR ++ + L + ++ LE + R +PI + E ++ +
Sbjct: 1148 PSHGLLKDALRKAREWLRAVEQ-LQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHL 1206
Query: 422 SSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDV-PE-TDMLLKMIGQAE 476
+SA W+D+ K ++VL S+A+++ D+ P D LK AE
Sbjct: 1207 NSAHQWKDNTACAFLKKGTFYTLLEVLMP-RSDAINIDSDLKPRFQDDFLKEKNPAE 1262
Score = 67 (28.6 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL----LSAPEIYICAAC 1293
C KP + + C C+EW+H+ CV L + + YIC C
Sbjct: 1761 CHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 65 (27.9 bits), Expect = 4.6e-38, Sum P(3) = 4.6e-38
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 1154 WRVRVSKLLEGLTKP-TIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKV 1212
W + +K LT+ +G+I+ +LK +N H L + R +W +++
Sbjct: 1113 WESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH--GLLKDALRKAREWLRAVEQL 1170
Query: 1213 VLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1246
++ + +I G N+P+ LE EL ++
Sbjct: 1171 QQNNHVTYCHTLEAMIERGLNIPIQLE-ELSRMQ 1203
Score = 60 (26.2 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLRP 1024
C+C +S+ + L F C C+D +H C+ P
Sbjct: 1296 CLC-KSEFRNLMFN-CQLCRDWFHEDCVPP 1323
Score = 55 (24.4 bits), Expect = 8.4e-45, Sum P(4) = 8.4e-45
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 997 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + +E++++ C C + +H+ C+ + YIC C
Sbjct: 1761 CHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 54 (24.1 bits), Expect = 4.1e-42, Sum P(4) = 4.1e-42
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 661 DEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL------ESLKDLVSQSKFLKISL 714
DE + + + N E +A A + + LL+L E+L DL+ + L++SL
Sbjct: 1460 DEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDSEIENLLDLMMEGDLLEVSL 1519
Query: 715 KEQTELEKVI 724
E EL +++
Sbjct: 1520 DETQELWRIL 1529
Score = 52 (23.4 bits), Expect = 6.6e-42, Sum P(4) = 6.6e-42
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 738
RLE++ L+ Q + L I L E L + WQ+ A L
Sbjct: 1358 RLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL 1400
Score = 51 (23.0 bits), Expect = 2.2e-36, Sum P(5) = 2.2e-36
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 407 LPICIVESEKLSQRISSAKVWRDSVRKCISN 437
LPI + E E L A W+D RK +S+
Sbjct: 1372 LPIRLPEDEALRCLAERAMNWQDRARKALSS 1402
Score = 48 (22.0 bits), Expect = 9.3e-40, Sum P(5) = 9.3e-40
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 482 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 533
C +R L+T+ LL +L + +PE E L+ A+ W R L
Sbjct: 1348 CPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL 1400
Score = 43 (20.2 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 1291 AACKPQAEESSTPQNVDGGRTNAEF------LEPKTPSPKHTNSRKK 1331
A+ P A+ + + +GG TN+ TP+P T+ ++K
Sbjct: 1643 ASTTPGADADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRK 1689
Score = 43 (20.2 bits), Expect = 8.9e-36, Sum P(3) = 8.9e-36
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 244 ISSSNRPT---TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSD 286
ISS +P +LTK+ G + + + C L++++ FS+D
Sbjct: 1431 ISSPRKPRRRGSLTKEASGSTESDADDDDDEDECRLRIVEDNFSND 1476
Score = 41 (19.5 bits), Expect = 4.8e-46, Sum P(4) = 4.8e-46
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 916 LMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGT 957
L++QL++L PE E + ++ NW+ R ++ + +
Sbjct: 1365 LLVQLQQL----PIRLPEDEALRCLAERAMNWQDRARKALSS 1402
Score = 38 (18.4 bits), Expect = 2.2e-36, Sum P(5) = 2.2e-36
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 268 VEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGI-R 326
+E W S + K + L G E EQFL + + I G+ + G+ +
Sbjct: 1110 IEAWESQAAKYFRRLTQQHELG----EIEQFLKSASD-----------INGQVPSHGLLK 1154
Query: 327 DCLHKAENW 335
D L KA W
Sbjct: 1155 DALRKAREW 1163
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 433 (157.5 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 94/215 (43%), Positives = 131/215 (60%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LF+ QPDLL QLVT++NP++L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 581 EVMKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 640
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y+Q + V S EEL C +A LD ++
Sbjct: 641 QGYNFAEAVNFCTADWLPTGRSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLNLAAAT 700
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
RE+ + +ER R+ L +GI ++ R+ E + +++ C C+ +LSA+AC
Sbjct: 701 HREMFIIVQEERKLRKSLLERGIKEAE----REAFELL-PDDERQCDKCKTTCFLSALAC 755
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
P VCL H + LC C + KL+L YR+TL EL
Sbjct: 756 SNCPERLVCLYHAQDLCSCPSEKLYLRYRYTLDEL 790
Score = 158 (60.7 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 89/367 (24%), Positives = 153/367 (41%)
Query: 387 ALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEID 446
A CS SE L R + L + +L R S W + V++ + I+I
Sbjct: 768 AQDLCSCPSEKLYLRYRYT-LDELLAMLHRLKVRAESFDSWANRVKEALEQDEGNKIDIK 826
Query: 447 VLYKLESEALDLKIDVPETDMLLKMIG-QAESCRARCSEALRGSMSLKTVELLLQELGDF 505
L L+ EA D K E L + E C + +E L S S + L+ L D
Sbjct: 827 DLEVLKEEAADKKFPNNELLQRLNTVFVDIEKCESCSTELLSNSQSSRMTLKELKTLVDT 886
Query: 506 TVNMP-------ELELLKQYHSDAIFWIARLNDILVNINGRKDQHN---VIDELNCILKE 555
N+P E++L+ Q + + +R ++ + Q + V E+ +L+E
Sbjct: 887 MQNLPCVIKQQDEVQLILQKIEE---FDSRAQVLVDSTKSEWKQDSPLPVATEIQALLEE 943
Query: 556 GASLRIQVDDLPLVEVELKKAHCR---EKALKACDTKMPLDFIRQVTAEA--VILQIERE 610
GASL + L+ L++ + L +++ L +R + V + E
Sbjct: 944 GASLPVIAPACELLSGLLEQGRWLGEVRRTLGPEGSEVTLTVLRNLMESGCNVPQSVSVE 1003
Query: 611 KLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEIS 668
+L +L A RWEE+A L K + E I+ +Q I V LP++ +Q +S
Sbjct: 1004 TAMAELQELLTIAERWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLS 1063
Query: 669 TAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCE 728
A++W+ + E P C L+ L+ LV+ + L + ++E +LE + +
Sbjct: 1064 RARAWVTDLEEIQNGEHY--P--C----LDDLEGLVAIGRDLPVKMEELKQLELQVASAH 1115
Query: 729 RWQNHAS 735
W+ AS
Sbjct: 1116 SWREKAS 1122
Score = 83 (34.3 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 325 IRDCLHKAENW---SSLPGSDSEKVRLDCVNELLGFDPL-PCNEPGHLILQNYAEEARSL 380
+++ L AE W + + D +K L + ++ L P P L LQ AR+
Sbjct: 1009 LQELLTIAERWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARAW 1068
Query: 381 I---QEI-NAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
+ +EI N C + +LE L + LP+ + E ++L +++SA WR+ K
Sbjct: 1069 VTDLEEIQNGEHYPC--LDDLEGLVAIGRDLPVKMEELKQLELQVASAHSWREKASKTFL 1126
Query: 437 NKCPAAIEIDVLYKL--ESEALDLKIDVPETDMLLKMIG 473
K ++VL +S+ ++ V E D + ++G
Sbjct: 1127 KKNSQHSLLEVLCPCVEKSKKMEDNSMVTEADSDVNVLG 1165
Score = 82 (33.9 bits), Expect = 4.9e-40, Sum P(3) = 4.9e-40
Identities = 70/334 (20%), Positives = 136/334 (40%)
Query: 321 WAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYA--EEAR 378
WA +++ L + E + + D E ++ + ++ P NE + + E+
Sbjct: 807 WANRVKEALEQDEG-NKIDIKDLEVLKEEAADK-----KFPNNELLQRLNTVFVDIEKCE 860
Query: 379 SLIQEI-NAALSACSKISELELLYSRASGLPICIV----ESEKLSQRI----SSAKVWRD 429
S E+ + + S+ + EL+ L LP C++ E + + Q+I S A+V D
Sbjct: 861 SCSTELLSNSQSSRMTLKELKTLVDTMQNLP-CVIKQQDEVQLILQKIEEFDSRAQVLVD 919
Query: 430 SVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESC-RARCSEALRG 488
S + P + ++ LE E L + P ++L ++ Q R + G
Sbjct: 920 STKSEWKQDSPLPVATEIQALLE-EGASLPVIAPACELLSGLLEQGRWLGEVRRTLGPEG 978
Query: 489 SMSLKTVELLLQELGDFTVNMPELELLKQYHSDA--IFWIARLNDILVNINGRKDQHNVI 546
S TV L E G N+P+ ++ ++ + IA + I Q + +
Sbjct: 979 SEVTLTVLRNLMESG---CNVPQSVSVETAMAELQELLTIAERWEEKAQICLEDRQKHHL 1035
Query: 547 DELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDT--KMP-LDFIRQVTAEAV 603
L I+ E + +Q+ ++ ++ L +A L+ P LD + + A
Sbjct: 1036 STLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGR 1095
Query: 604 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHK 637
L ++ E+L L +A+A W E+A+ + K
Sbjct: 1096 DLPVKMEELK-QLELQVASAHSWREKASKTFLKK 1128
Score = 75 (31.5 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 52/227 (22%), Positives = 101/227 (44%)
Query: 1064 DLRMLIELLSDSEFFCRGIEAKDVLQEV-VDVALECKTCLTDIVK-FESCYLD-KDLHVI 1120
DL +L E +D +F E L V VD+ +C++C T+++ +S + K+L +
Sbjct: 827 DLEVLKEEAADKKF--PNNELLQRLNTVFVDIE-KCESCSTELLSNSQSSRMTLKELKTL 883
Query: 1121 SN---KLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYL 1177
+ L +K ++ + Q D + A+ L S+ + P +IQ L
Sbjct: 884 VDTMQNLPCVIKQQDEVQLI-LQKIEEFD-SRAQVLVDSTKSEWKQDSPLPVATEIQALL 941
Query: 1178 KEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGA-LSLDKVFELIAEGENLP 1235
+EG L I+P L+E R W ++ + G+ ++L + L+ G N+P
Sbjct: 942 EEGASLPVIAPACELLSGLLEQGR----WLGEVRRTLGPEGSEVTLTVLRNLMESGCNVP 997
Query: 1236 VYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLL 1282
+ E + +L I + ++EKA I C + + +H+ ++ +
Sbjct: 998 QSVSVETAMAELQELL-TIAER-WEEKAQI-CLEDRQKHHLSTLEAI 1041
Score = 74 (31.1 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 60/292 (20%), Positives = 121/292 (41%)
Query: 693 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGD 752
S + L+ LK LV + L +K+Q E++ ++ E + + A L+ + K D
Sbjct: 873 SRMTLKELKTLVDTMQNLPCVIKQQDEVQLILQKIEEFDSRAQVLVDSTKSEW-KQDSPL 931
Query: 753 GLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSL 812
++ + + +E+ + A C L G + L TL ++ L+V +L
Sbjct: 932 PVATEIQALLEEGASLPVIAPACELLSGL-LEQGRWLGEVRRTLGPEGSEVT-LTVLRNL 989
Query: 813 EDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCK--LSDVEEVL 870
+ES V + +S + L L +W ++A ++ C R K LS +E ++
Sbjct: 990 --MESGCNVPQSVSVETAMAELQELLTIAERWEEKA-QI----CLEDRQKHHLSTLEAIV 1042
Query: 871 AGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAA 927
+ I P ++ L + + + + W + + N C L+ +G
Sbjct: 1043 NEAQLIPVQLPNILS-LQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVA----IGRDL 1097
Query: 928 AFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 979
EL+++ +V +W+++ + T + KNS LL+ + V +S
Sbjct: 1098 PVKMEELKQLELQVASAHSWREKASK---TFL-KKNSQHSLLEVLCPCVEKS 1145
Score = 63 (27.2 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 407 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIE-IDVLYKLESEALDLKIDVPET 465
LP+ + E E L A W+ ++ + P E +D L ++E E + +K + PE
Sbjct: 1332 LPVRLPEGEALQCLTERAINWQGRAKQALDT--PEVQEALDRLQQVEDEMVSIKEEEPEE 1389
Query: 466 DMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 525
K G A + EA G + L E G+ + E + S
Sbjct: 1390 KK--KWNGDAVIVLSDSEEAEDGVIDLT-------EDGN-SPKKNERNAVNGTQSGCENG 1439
Query: 526 IARLNDILVNINGRKDQHNVIDELNC-ILKEGASLRIQVDDLPL----VEVELKKAHCRE 580
I R + + G + +++ L +++ S+R Q+++L L +EV L + H
Sbjct: 1440 IGRKSSAH-EVTGVESLLSLVPSLKGPVVELNTSVRAQLEELQLEGDLLEVTLDQTHAIY 1498
Query: 581 KALKACDTKMPLDFIRQVTAEAVILQIER 609
+ L+A ++ P D +R T + LQ +R
Sbjct: 1499 RILQA-SSQPPQDTLR--TLIQIELQEQR 1524
Score = 62 (26.9 bits), Expect = 5.8e-48, Sum P(3) = 5.8e-48
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1249 SMLYCICRKPYDEKAMIACYQCDEWYHIDCV 1279
S CIC P + C+ C +W+H CV
Sbjct: 1251 SQTVCICGGP-PRPLLHRCHLCKDWFHGGCV 1280
Score = 57 (25.1 bits), Expect = 5.9e-37, Sum P(4) = 5.9e-37
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 1149 LARNLWRVRVSKLL--EGLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQW 1205
L + W V + L EG ++ T+ ++N ++ G + S + +L EL I +W
Sbjct: 961 LEQGRWLGEVRRTLGPEG-SEVTLTVLRNLMESGCNVPQSVSVETAMAELQELLTIAERW 1019
Query: 1206 ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRA 1247
+ A+ + D L + ++ E + +PV L L SL+A
Sbjct: 1020 EEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNIL-SLQA 1060
Score = 53 (23.7 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 24/78 (30%), Positives = 33/78 (42%)
Query: 481 RCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL--VNING 538
RC + R L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1310 RCQRSRRPR--LETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAKQALDTPEVQE 1367
Query: 539 RKDQ-HNVIDELNCILKE 555
D+ V DE+ I +E
Sbjct: 1368 ALDRLQQVEDEMVSIKEE 1385
Score = 51 (23.0 bits), Expect = 8.2e-47, Sum P(3) = 8.2e-47
Identities = 20/101 (19%), Positives = 41/101 (40%)
Query: 879 SFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS---WSLMLQLKELGEAAAFDCPELE 935
SFP ++ + + K W + +F +C + +L L + PE E
Sbjct: 1281 SFPPLLATSDTHLTKPLCWWDWNTRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGE 1340
Query: 936 KVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 976
+ ++ NW+ R K+ + T + L LQ+++ +
Sbjct: 1341 ALQCLTERAINWQGRAKQALDTP--EVQEALDRLQQVEDEM 1379
Score = 51 (23.0 bits), Expect = 2.5e-36, Sum P(4) = 2.5e-36
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNIS-PKDHYRQKLMELNRIGSQWADVAKKV 1212
W + LE K + ++ + E L+ + P Q + R W +++
Sbjct: 1019 WEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARA---WVTDLEEI 1075
Query: 1213 VLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV +E ELK L
Sbjct: 1076 QNGEHYPCLDDLEGLVAIGRDLPVKME-ELKQL 1107
Score = 47 (21.6 bits), Expect = 2.1e-46, Sum P(3) = 2.1e-46
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 991 SMTLCMCCESDSKELEFLICSACKDCYHLQCL 1022
S T+C+C L C CKD +H C+
Sbjct: 1251 SQTVCICGGPPRPLLHR--CHLCKDWFHGGCV 1280
Score = 45 (20.9 bits), Expect = 3.5e-46, Sum P(3) = 3.5e-46
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 928 AFDCPELEKVLSKVDKVENWKQRCKE 953
A D PE+++ L ++ +VE+ KE
Sbjct: 1359 ALDTPEVQEALDRLQQVEDEMVSIKE 1384
Score = 43 (20.2 bits), Expect = 7.0e-38, Sum P(4) = 7.0e-38
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 738
RLE++ L+ + L + L E L+ + WQ A L
Sbjct: 1318 RLETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAKQAL 1360
Score = 43 (20.2 bits), Expect = 5.9e-37, Sum P(4) = 5.9e-37
Identities = 23/100 (23%), Positives = 42/100 (42%)
Query: 909 CAQQSWSLMLQLK-ELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLG 967
C+ S L L+ + L E A L ++ + + ++W R KE + G+K +
Sbjct: 772 CSCPSEKLYLRYRYTLDELLAM----LHRLKVRAESFDSWANRVKEALEQDEGNKIDIKD 827
Query: 968 LLQKIKQSVHRSLYIYNKPHGSVSMTLCMC--CESDSKEL 1005
L + +K+ + N+ ++ CES S EL
Sbjct: 828 L-EVLKEEAADKKFPNNELLQRLNTVFVDIEKCESCSTEL 866
Score = 42 (19.8 bits), Expect = 8.5e-07, Sum P(3) = 8.5e-07
Identities = 12/59 (20%), Positives = 28/59 (47%)
Query: 366 GHLILQNYAEEARSLI---QEINAALSACSKISELELLYSRASGLPICIVESEKLSQRI 421
G +++Y + R + +E+ ++AC + +L L + + I + E KL + +
Sbjct: 660 GRSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKLRKSL 718
Score = 37 (18.1 bits), Expect = 2.4e-45, Sum P(3) = 2.4e-45
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1364 WHNR--KPFRRAAKKRTVLDSLCPFI 1387
W + K F + + ++L+ LCP +
Sbjct: 1117 WREKASKTFLKKNSQHSLLEVLCPCV 1142
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 428 (155.7 bits), Expect = 6.5e-48, Sum P(4) = 6.5e-48
Identities = 94/222 (42%), Positives = 131/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C + L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 144 (55.7 bits), Expect = 6.5e-48, Sum P(4) = 6.5e-48
Identities = 89/382 (23%), Positives = 171/382 (44%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 524
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 525 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 578
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 579 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 634
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 635 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 692
+ + M E+I+ +++I LP++ ++ + A+ W E A+ +
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGN- 1015
Query: 693 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD--- 746
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLS 1075
Query: 747 -KDDIGD-GLSNSLVSKIEQLI 766
+ DIG G + K++++I
Sbjct: 1076 PRTDIGVYGSGKNRRKKVKEII 1097
Score = 78 (32.5 bits), Expect = 6.5e-48, Sum P(4) = 6.5e-48
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1300
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSAEMAENEDYICINCAKKQGPDS 1666
Score = 78 (32.5 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 76 (31.8 bits), Expect = 7.1e-41, Sum P(4) = 7.1e-41
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 367 HLILQNYAEEARSLIQEINAALSA--CSKISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 64 (27.6 bits), Expect = 1.2e-39, Sum P(4) = 1.2e-39
Identities = 46/271 (16%), Positives = 124/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ + L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 59 (25.8 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 50/220 (22%), Positives = 93/220 (42%)
Query: 1062 RSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTC--LTDIV--KFESCYLDKDL 1117
+ DL L +L D+E R D+ +++ D E +TC + ++ K + D
Sbjct: 757 KKDLIELRVMLEDAED--RKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHRQSSDS 814
Query: 1118 HVISNKLTIT-LKA--REAAGV-----FDRQSNSALDFALARNLWRVRVSKLLEGLTKPT 1169
KLT+ LKA ++ + RQ + LD + R + + T P
Sbjct: 815 GKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDV---EEFHERAQEAMMDET-PD 870
Query: 1170 IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIA 1229
++Q + G + + + R K EL + ++W D + + D ++LD + +LI
Sbjct: 871 SSKLQMLIDMGSSLYVELPELPRLK-QELQQ--ARWLDEVRLTLSDPQQVTLDVMKKLID 927
Query: 1230 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ 1269
G L + E K++ L + + ++EKA + C Q
Sbjct: 928 SGVGLAPHHAVE-KAMAELQELLTVSER-WEEKAKV-CLQ 964
Score = 58 (25.5 bits), Expect = 8.6e-35, Sum P(3) = 8.6e-35
Identities = 33/136 (24%), Positives = 56/136 (41%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYC 1253
+L EL + +W + AK + S+ + ++ E +N+P +L L SL+
Sbjct: 944 ELQELLTVSERWEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA----- 997
Query: 1254 ICRKPYDEKAMIACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGR 1310
+K + A + Q Y +++ ++ LSA I + PQ E R
Sbjct: 998 -LQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRER 1056
Query: 1311 TNAEFLEPKTPSPKHT 1326
T FL+ K S HT
Sbjct: 1057 TGRTFLK-KNSS--HT 1069
Score = 56 (24.8 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 84/387 (21%), Positives = 152/387 (39%)
Query: 370 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 424
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRHSMAN-LENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 485 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 540
A++ + +E L + L +P L+ L Q S A W R + N
Sbjct: 1010 AIQSGNNYAYLEQL-ESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 541 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 598
V+ I G + R +V ++ +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEI--IEKEKEKDLDLEPL---SDLEEGLEESRD- 1122
Query: 599 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 658
TA V + ERE+ I+ L AA A ++ + + +F I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAA----NLAKMTIVERIEEVKF-CICRKTASGFMLQC 1177
Query: 659 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 711
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 712 ISLKEQTELEKVINNCERWQNHASSLL 738
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDKARQAL 1264
Score = 53 (23.7 bits), Expect = 6.5e-48, Sum P(4) = 6.5e-48
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1040
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLC 1215
Score = 48 (22.0 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDKARQALA 1265
Score = 42 (19.8 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 888
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 889 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 936
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 878
Score = 39 (18.8 bits), Expect = 1.8e-46, Sum P(4) = 1.8e-46
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 915 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
SL++ L++L PE E + ++ +W+ + ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDKARQALATD--ELSSALAKLSVLSQ 1281
Score = 39 (18.8 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 930 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 978
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 38 (18.4 bits), Expect = 2.3e-46, Sum P(4) = 2.3e-46
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1003 KELEFLICSACKDCYHLQC 1021
+E++F IC + LQC
Sbjct: 1159 EEVKFCICRKTASGFMLQC 1177
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 431 (156.8 bits), Expect = 1.0e-47, Sum P(4) = 1.0e-47
Identities = 95/222 (42%), Positives = 132/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C +K L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 139 (54.0 bits), Expect = 1.0e-47, Sum P(4) = 1.0e-47
Identities = 88/380 (23%), Positives = 171/380 (45%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 528
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 529 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 580
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 905
Query: 581 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 636
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 906 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 965
Query: 637 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 694
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 1017
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----K 747
LE L+ L ++ + + + L+ ++E + W+ + L+ + LL +
Sbjct: 1018 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPR 1077
Query: 748 DDIGD-GLSNSLVSKIEQLI 766
DIG G + K+++LI
Sbjct: 1078 TDIGVYGSGKNRRKKVKELI 1097
Score = 78 (32.5 bits), Expect = 1.0e-47, Sum P(4) = 1.0e-47
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1303
C++P +K + C CDEW+H CV + ++ E YIC C K Q S P
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPVSPGP 1669
Score = 78 (32.5 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 78 (32.5 bits), Expect = 2.1e-41, Sum P(4) = 2.1e-41
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 990
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 1050
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 1.4e-40, Sum P(4) = 1.4e-40
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 992
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 1051
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 70 (29.7 bits), Expect = 1.9e-39, Sum P(4) = 1.9e-39
Identities = 87/387 (22%), Positives = 151/387 (39%)
Query: 370 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 424
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 485 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 540
A++ + +E L + L +P LE L Q S A W R + N
Sbjct: 1010 AIQSGSNYAYLEQL-ESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 541 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 598
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD- 1122
Query: 599 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 658
TA V + ERE+ I+ L AA + D I + + C I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQC 1177
Query: 659 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 711
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 712 ISLKEQTELEKVINNCERWQNHASSLL 738
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDRARQAL 1264
Score = 62 (26.9 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 897
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1322 SPKHT 1326
S HT
Sbjct: 1067 S--HT 1069
Score = 53 (23.7 bits), Expect = 1.0e-47, Sum P(4) = 1.0e-47
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1040
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 47 (21.6 bits), Expect = 1.0e-37, Sum P(3) = 1.0e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 1.4e-46, Sum P(4) = 1.4e-46
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 915 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 41 (19.5 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 786 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 841
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 842 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 901
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLEA-LPQVESQVAAARAWRERT 1057
Query: 902 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 959
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1115
Query: 960 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1016
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1116 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1172
Query: 1017 YHLQC 1021
+ LQC
Sbjct: 1173 FMLQC 1177
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 431 (156.8 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 95/222 (42%), Positives = 132/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C +K L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 139 (54.0 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 88/380 (23%), Positives = 171/380 (45%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 528
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 529 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 580
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 905
Query: 581 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 636
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 906 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 965
Query: 637 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 694
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 1017
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----K 747
LE L+ L ++ + + + L+ ++E + W+ + L+ + LL +
Sbjct: 1018 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPR 1077
Query: 748 DDIGD-GLSNSLVSKIEQLI 766
DIG G + K+++LI
Sbjct: 1078 TDIGVYGSGKNRRKKVKELI 1097
Score = 78 (32.5 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 78 (32.5 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 990
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 1050
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 3.6e-40, Sum P(3) = 3.6e-40
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 992
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 1051
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 70 (29.7 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 87/387 (22%), Positives = 151/387 (39%)
Query: 370 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 424
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 485 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 540
A++ + +E L + L +P LE L Q S A W R + N
Sbjct: 1010 AIQSGSNYAYLEQL-ESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 541 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 598
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD- 1122
Query: 599 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 658
TA V + ERE+ I+ L AA + D I + + C I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQC 1177
Query: 659 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 711
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 712 ISLKEQTELEKVINNCERWQNHASSLL 738
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDRARQAL 1264
Score = 62 (26.9 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 897
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1322 SPKHT 1326
S HT
Sbjct: 1067 S--HT 1069
Score = 53 (23.7 bits), Expect = 9.4e-45, Sum P(3) = 9.4e-45
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1040
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 47 (21.6 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 915 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 41 (19.5 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 786 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 841
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 842 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 901
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLEA-LPQVESQVAAARAWRERT 1057
Query: 902 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 959
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1115
Query: 960 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1016
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1116 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1172
Query: 1017 YHLQC 1021
+ LQC
Sbjct: 1173 FMLQC 1177
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 448 (162.8 bits), Expect = 4.3e-47, Sum P(3) = 4.3e-47
Identities = 91/217 (41%), Positives = 134/217 (61%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN
Sbjct: 532 VMKRLAPELFVSQPDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQ 591
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLK 125
G N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ ++
Sbjct: 592 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQ 651
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C
Sbjct: 652 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCS 706
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C+P VCL H + LC C K L YR+TL +LY +
Sbjct: 707 CKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 743
Score = 114 (45.2 bits), Expect = 4.3e-47, Sum P(3) = 4.3e-47
Identities = 40/195 (20%), Positives = 88/195 (45%)
Query: 548 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVIL 605
EL +L +++ L + L++AH E+ +AC + + LD +R++ V L
Sbjct: 888 ELQDLLDVSFEFDVELPQLAEMRTRLEQAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGL 947
Query: 606 QIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLD 661
EK L +L + W+++A +L + + + +++ ++I LPS
Sbjct: 948 APYSAVEKAMARLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGA 1007
Query: 662 EVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 721
+++ + A+ WL++ E P L++L +LV++ + + + L LE
Sbjct: 1008 ALKDSVQRARDWLQDVEALQVGGRV--PV------LDTLIELVTRGRSIPVHLSSLPRLE 1059
Query: 722 KVINNCERWQNHASS 736
++ W+ A++
Sbjct: 1060 SLVAEVHVWKECAAN 1074
Score = 98 (39.6 bits), Expect = 0.00077, Sum P(5) = 0.00077
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 985 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1044
K +V + +C+ C S S E L+C C D YH CL P D + + CP C E
Sbjct: 301 KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 359
Query: 1045 -SESVSQFG 1052
S+ FG
Sbjct: 360 CSKPQEAFG 368
Score = 87 (35.7 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 54/267 (20%), Positives = 107/267 (40%)
Query: 797 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 853
HW KA S L P SL + +++ E + S + L +S+ WL+ +E +
Sbjct: 969 HWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSVQRARDWLQD-VEALQ 1027
Query: 854 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS 913
+ L + E++ + I + L S + + +W+E F + S
Sbjct: 1028 VGGRVP--VLDTLIELVTRGRSIPVHLSS-LPRLESLVAEVHVWKECAANTFLTE--NSS 1082
Query: 914 WSLM-----------LQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDK 962
+SL+ L LK P K +V+ + + ++ E T+
Sbjct: 1083 FSLLEVLCPRCDVGLLGLKRKQRKLKEPLPSGRKKSPRVESLSDLERALMESRETA--SA 1140
Query: 963 NSLLGLLQKIKQSVHRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCY 1017
+ LG + + +SL + N+ P V M +C+C ++ + + + C C+D +
Sbjct: 1141 MATLGEARLREMEALQSLRLANEGKLLSPVQDVDMKVCLCQKAPAAPM--IQCELCRDAF 1198
Query: 1018 HLQCLRPTEVDRNHAEAYICPYCQYFE 1044
H C+ + + ++CP+C+ E
Sbjct: 1199 HTSCVAVPSISQG-PRIWLCPHCRRSE 1224
Score = 82 (33.9 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 642 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 701
E +D++ S + V LP L E++ + A WL+ E+ A + P+S SL + L
Sbjct: 888 ELQDLLDVSFEFDVELPQLAEMRTRLEQAH-WLE--EVQQA---CLDPSSLSLDDMRRLI 941
Query: 702 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
DL V + + + K L++++ E W + A SLL+
Sbjct: 942 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKARSLLK 979
Score = 78 (32.5 bits), Expect = 4.3e-47, Sum P(3) = 4.3e-47
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1240 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS---APEIYICAACK 1294
K L ++ M C+C+K MI C C + +H CV + S P I++C C+
Sbjct: 1165 KLLSPVQDVDMKVCLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGPRIWLCPHCR 1221
Score = 78 (32.5 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 52/239 (21%), Positives = 100/239 (41%)
Query: 351 VNELLGFDP----LPCNEPGHLILQNYAEEARSLIQEINAALSA-CSKISELELLYSRAS 405
VNEL F LPC +L++ Q LS +EL+ L +
Sbjct: 838 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSF 897
Query: 406 GLPICIVESEKLSQRISSAKVWRDSVRK-CISNKCPAAIEIDVLYKLESEALDLK-IDVP 463
+ + + ++ R+ A W + V++ C+ P+++ +D + +L + L
Sbjct: 898 EFDVELPQLAEMRTRLEQAH-WLEEVQQACLD---PSSLSLDDMRRLIDLGVGLAPYSAV 953
Query: 464 ETDM--LLKMIGQAESC--RARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYH 519
E M L +++ +E +AR R SL ++ +++E+ + +P LK
Sbjct: 954 EKAMARLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSV 1013
Query: 520 SDAIFWIARLNDI-LVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH 577
A W L D+ + + GR V+D L ++ G S+ + + LP +E + + H
Sbjct: 1014 QRARDW---LQDVEALQVGGRVP---VLDTLIELVTRGRSIPVHLSSLPRLESLVAEVH 1066
Score = 67 (28.6 bits), Expect = 3.4e-42, Sum P(3) = 3.4e-42
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 754
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1228 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRARQLLSSGNLKPVQDRVGSGL 1285
Score = 64 (27.6 bits), Expect = 7.0e-42, Sum P(3) = 7.0e-42
Identities = 32/164 (19%), Positives = 68/164 (41%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 414
+ +P P L++ + AR +Q++ A L ++ L+ L +R +P+ +
Sbjct: 997 EEIPAYLPSGAALKDSVQRARDWLQDVEA-LQVGGRVPVLDTLIELVTRGRSIPVHLSSL 1055
Query: 415 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLY-KLESEALDLKIDVPETDMLLKMIG 473
+L ++ VW++ + + ++VL + + L LK + L G
Sbjct: 1056 PRLESLVAEVHVWKECAANTFLTENSSFSLLEVLCPRCDVGLLGLKRKQRKLKEPLPS-G 1114
Query: 474 QAESCRARC-SEALRGSMSLKTVELLLQELGDFTVNMPELELLK 516
+ +S R S+ R M + + LG+ + E+E L+
Sbjct: 1115 RKKSPRVESLSDLERALMESRETASAMATLGE--ARLREMEALQ 1156
Score = 62 (26.9 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 52/241 (21%), Positives = 101/241 (41%)
Query: 737 LLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFH--EISELQNACS 794
LL+D LL++ + S L+S E++ ++ E +S FD +++E++
Sbjct: 860 LLKD---LLNRVEDFQQHSQKLLS--EEMPSAAELQDLLDVSFEFDVELPQLAEMRTRLE 914
Query: 795 TLHWCKKAL-SFLSVSP-SLEDVESLMAVAEGLS--TRCFSSM--LWNSLIHGVKWLKRA 848
HW ++ + L S SL+D+ L+ + GL+ + +M L L W +A
Sbjct: 915 QAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKA 974
Query: 849 LEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK 908
++ A R L+ + V+ + I P L ++Q+ + W + V + +
Sbjct: 975 RSLLKAR---PRHSLNSLATVVKEMEEIPAYLPSGAA-LKDSVQRARDWLQDV-EALQVG 1029
Query: 909 CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGL 968
+++L G + L ++ S V +V WK+ C + SLL +
Sbjct: 1030 GRVPVLDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKE-CAANTFLTENSSFSLLEV 1088
Query: 969 L 969
L
Sbjct: 1089 L 1089
Score = 62 (26.9 bits), Expect = 2.2e-39, Sum P(3) = 2.2e-39
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 1203 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1262
+ W + ++ LD +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 916 AHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 973
Query: 1263 A 1263
A
Sbjct: 974 A 974
Score = 61 (26.5 bits), Expect = 1.5e-42, Sum P(4) = 1.5e-42
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
+L EL + W D A+ ++ SL+ + ++ E E +P YL
Sbjct: 959 RLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYL 1003
Score = 56 (24.8 bits), Expect = 1.5e-42, Sum P(4) = 1.5e-42
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD----ARCLLDKDDI 750
L + L+ V+Q L L + L+ ++N E +Q H+ LL + A L D D+
Sbjct: 836 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDV 895
Query: 751 GDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNAC 793
L ++ ++ T +E A H + E+Q AC
Sbjct: 896 SFEFDVEL-PQLAEMRTRLEQA-----------HWLEEVQQAC 926
Score = 53 (23.7 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1221 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC 1255
LD + EL+ G ++PV+L L+SL A ++ C
Sbjct: 1035 LDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKEC 1071
Score = 53 (23.7 bits), Expect = 8.1e-38, Sum P(2) = 8.1e-38
Identities = 44/195 (22%), Positives = 74/195 (37%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
+PLP +++ ++ R+L++ A SA + + E L A + + KL
Sbjct: 1109 EPLPSGRKKSPRVESLSDLERALMESRETA-SAMATLGEARLREMEALQ-SLRLANEGKL 1166
Query: 418 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 476
+ ++ C+ K PAA I +L +A + VP + I
Sbjct: 1167 LSPVQDV-----DMKVCLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGPR-IWLCP 1218
Query: 477 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 536
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1219 HCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRARQLLSSG 1272
Query: 537 NGRKDQHNVIDELNC 551
N + Q V L C
Sbjct: 1273 NLKPVQDRVGSGLLC 1287
Score = 44 (20.5 bits), Expect = 0.00077, Sum P(5) = 0.00077
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 428 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET-DMLLKMIGQAESCRA-RCSEA 485
R SV+ S CP A ++ +EA+++KI+ ET + + + C A +C
Sbjct: 215 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEETAEARTHNLRRRMGCPAPKCENE 269
Query: 486 --LRGSMSLKTVE 496
L+ S+ + +E
Sbjct: 270 KDLKSSIKQEALE 282
Score = 41 (19.5 bits), Expect = 3.1e-43, Sum P(3) = 3.1e-43
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGT 957
PE + + +++ NW+ R ++++ +
Sbjct: 1246 PEGDALRYMIERTVNWQHRARQLLSS 1271
Score = 38 (18.4 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 975
P + + + + W E + + K SL+ I++S
Sbjct: 742 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 785
Score = 38 (18.4 bits), Expect = 1.1e-40, Sum P(4) = 1.1e-40
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 699 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 736 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 794
Query: 758 LVSKIEQLITSMESAANC 775
L+ + +L+T + A C
Sbjct: 795 LLRHL-RLVT--QDAEKC 809
Score = 37 (18.1 bits), Expect = 0.00077, Sum P(5) = 0.00077
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 1071 LLSDSEFFCRGIEAKDVLQEVV 1092
+ S E CR DVL VV
Sbjct: 625 VFSHDEMICRMASKADVLDVVV 646
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 431 (156.8 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 95/222 (42%), Positives = 132/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 135 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 194
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 195 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 254
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 255 CKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 309
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C +K L YR+ L +L L V
Sbjct: 310 SCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 351
Score = 136 (52.9 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 78/337 (23%), Positives = 153/337 (45%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 354 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 408
Query: 474 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 528
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 409 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 464
Query: 529 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 580
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 465 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 524
Query: 581 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 636
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 525 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 584
Query: 637 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 694
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 585 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 636
Query: 695 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 731
LE L+ L ++ + + + L+ ++E + W+
Sbjct: 637 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWR 673
Score = 86 (35.3 bits), Expect = 6.4e-41, Sum P(2) = 6.4e-41
Identities = 54/240 (22%), Positives = 106/240 (44%)
Query: 525 WIARLNDIL-VNINGRKDQHNVIDELNCILKEGASLRIQVDDL-PLVEVELKKAH-C--- 578
W++R+ + L N N +KD + EL +L++ + +DL + +K+A C
Sbjct: 361 WVSRVTEALSANFNHKKD----LIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASV 416
Query: 579 -------REKALKACD-----TKMPLD----FIRQV-TAEAVILQIEREKLFIDLSGVLA 621
++K ++ D TK+ ++ F++Q+ + VI Q + K +D
Sbjct: 417 AQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLD------ 470
Query: 622 AAMRWEERAADILIHKA-QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELF 680
+ ERA + ++ + + + +I ++V LP L ++ E+ A+ WL L
Sbjct: 471 DVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQAR-WLDEVRLT 529
Query: 681 LASAFAVAPASCSLLRLESLKDL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
L+ P +L ++ L D V + + K EL++++ ERW+ A LQ
Sbjct: 530 LSD-----PQQVTLDVMKKLIDSGVGLAPHHAVE-KAMAELQELLTVSERWEEKAKVCLQ 583
Score = 78 (32.5 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 560 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 609
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 610 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 669
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 670 RAWRERTGRTFLKKNSSHTLLQVL 693
Score = 70 (29.7 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 442 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 501
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 502 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 553
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 554 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 611
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 612 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 670
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 671 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 701
Score = 62 (26.9 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 458 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 516
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 517 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 573
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 574 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 626
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 627 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 685
Query: 1322 SPKHT 1326
S HT
Sbjct: 686 S--HT 688
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 432 (157.1 bits), Expect = 7.8e-46, Sum P(3) = 7.8e-46
Identities = 95/222 (42%), Positives = 131/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLLTEEETRLRESVMQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C +K L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 124 (48.7 bits), Expect = 7.8e-46, Sum P(3) = 7.8e-46
Identities = 91/414 (21%), Positives = 176/414 (42%)
Query: 420 RISSAKVWRDSVRKCIS----NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 472
R S W V + +S +K IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKGDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAV 789
Query: 473 GQAESCRARCSEALRGSMSLKT--------VELLLQELGDFTVNMPELE-LLKQYHSDAI 523
+AE+C + L + +L ++EL F + L ++ Q
Sbjct: 790 KEAETCASVAQLLLSKKQKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQ--- 846
Query: 524 FWIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAH 577
+ L D + + R Q ++DE L ++ G+SL +++ +L ++ EL++A
Sbjct: 847 --VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQAR 903
Query: 578 CREKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADI 633
++ L D + + LD ++++ V L EK +L +L + RWEE+A
Sbjct: 904 WLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVC 963
Query: 634 LIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPAS 691
L + + + E I+ ++ I LP++ ++ + A+ W E A+ S
Sbjct: 964 LQARPRHSVASLESIVNEAKSIPAFLPNVLSLKEALQKAREWTTKVE-------AIQSGS 1016
Query: 692 CSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD-- 746
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1017 -NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVL 1075
Query: 747 --KDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHE-ISELQNACSTL 796
+ DIG G + K+++LI E + L D E + E ++A + +
Sbjct: 1076 SPRTDIGIYGSGKNRRKKVKELIEK-EKEKDLDLEPLSDLEEGLEETRDAATVV 1128
Score = 84 (34.6 bits), Expect = 9.5e-46, Sum P(4) = 9.5e-46
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1303
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S P
Sbjct: 1618 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAESEDYICTNCAKKQGPDSPGP 1672
Score = 78 (32.5 bits), Expect = 7.8e-46, Sum P(3) = 7.8e-46
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +CICRK M+ C C +W+H CV L
Sbjct: 1158 RIEDVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1192
Score = 77 (32.2 bits), Expect = 6.9e-41, Sum P(4) = 6.9e-41
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 942 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKS---IPAFLPN 991
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 992 VLSLKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1051
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1052 RAWRERTGRTFLKKNSSHTLLQVL 1075
Score = 67 (28.6 bits), Expect = 7.4e-40, Sum P(4) = 7.4e-40
Identities = 47/269 (17%), Positives = 121/269 (44%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 824 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 883
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 884 S---LYVELPELARLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 935
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H+V L I+ E S+ + ++
Sbjct: 936 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKSIPAFLPNVL 993
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 994 SLKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1052
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDI 653
W ER + K ++ DI
Sbjct: 1053 AWRERTGRTFLKKNSSHTLLQVLSPRTDI 1081
Score = 56 (24.8 bits), Expect = 2.2e-39, Sum P(3) = 2.2e-39
Identities = 56/283 (19%), Positives = 115/283 (40%)
Query: 786 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 841
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 943 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKSIPAFLPNVLSLKEALQKA 1002
Query: 842 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 901
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1003 REWTTK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1058
Query: 902 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 959
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1059 GRTF-LK-KNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1116
Query: 960 G-----DKNSLLGLL----QKIKQSVHRSLYIYNKPHGSV-----SMTLCMCCESDSKEL 1005
G D +++ + QK +++H SL N S+ + C+C ++ S +
Sbjct: 1117 GLEETRDAATVVAVFKEREQKELEAMH-SLRAANLAKMSMVDRIEDVKFCICRKTASGFM 1175
Query: 1006 EFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1040
L C CKD +H C+ P + + ++CP C
Sbjct: 1176 --LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1216
Score = 56 (24.8 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 78/385 (20%), Positives = 143/385 (37%)
Query: 370 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 424
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 895 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 953
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ W + + C+ + P + L + +EA + +P L + + +A +
Sbjct: 954 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKSIPAFLPNVLSLKEALQKAREWTTKVEA 1011
Query: 485 ALRGS--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 542
GS L+ +E L + V + L ++ + A W R + N
Sbjct: 1012 IQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTL 1071
Query: 543 HNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA 600
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1072 LQVLSPRTDIGIYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRDAAT 1126
Query: 601 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL 660
+ + ERE+ ++ L AA + D I + C I R + F++ L
Sbjct: 1127 VVAVFK-EREQKELEAMHSLRAANLAKMSMVD-RIEDVKFC----ICRKTASGFMLQCEL 1180
Query: 661 --DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKIS 713
D N + + S K S + P R LE++ L+ + L +
Sbjct: 1181 CKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVR 1240
Query: 714 LKEQTELEKVINNCERWQNHASSLL 738
L E L+ + WQ+ A L
Sbjct: 1241 LPEGEALQCLTERAMSWQDRARQAL 1265
Score = 55 (24.4 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 34/162 (20%), Positives = 68/162 (41%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ A + K L D+ +F + D S+KL + + + V + + L
Sbjct: 840 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELARLKQE 898
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 899 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 955
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1246
W + AK + S+ + ++ E +++P +L L SL+
Sbjct: 956 WEEKAKVCLQARPRHSVASLESIVNEAKSIPAFLPNVL-SLK 996
Score = 47 (21.6 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1228 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1266
Score = 43 (20.2 bits), Expect = 2.8e-37, Sum P(4) = 2.8e-37
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 888
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVSRVTEALSANFNHKKGDLIELRVMLEDAEDRKYPENDLFRKLR 786
Query: 889 SAIQKHKLWQEQVHQFFNLKCA-QQS-----WSLMLQLKELGEAAA--FDCP----ELEK 936
A+++ + + K +QS L ++EL F P + +
Sbjct: 787 DAVKEAETCASVAQLLLSKKQKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 846
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + D + L L+
Sbjct: 847 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 879
Score = 42 (19.8 bits), Expect = 9.5e-46, Sum P(4) = 9.5e-46
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 915 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1229 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1282
Score = 41 (19.5 bits), Expect = 2.8e-37, Sum P(4) = 2.8e-37
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 1195 LMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLE 1239
L E + +W + + S L+++ L A+G +PV L+
Sbjct: 995 LKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLD 1039
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 428 (155.7 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 94/222 (42%), Positives = 131/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C + L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 146 (56.5 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 81/339 (23%), Positives = 153/339 (45%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 524
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 525 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 578
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 579 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 634
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 635 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 692
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 693 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 731
+ LE L+ L ++ + + + L ++E + W+
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWR 1054
Score = 83 (34.3 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 594 FIRQ-VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA-QMCEFEDIIRASQ 651
F++Q V+ VI Q + K +D + ERA + ++ + + + +I
Sbjct: 829 FVQQLVSLPCVISQTRQVKNLLD------DVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 652 DIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL-VSQSKFL 710
++V LP L ++ E+ A+ WL L L+ P +L ++ L D V +
Sbjct: 883 SLYVELPELPRLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMKKLIDSGVGLAPHH 936
Query: 711 KISLKEQTELEKVINNCERWQNHASSLLQ 739
+ K EL++++ ERW+ A LQ
Sbjct: 937 AVE-KAMAELQELLTVSERWEEKAKVCLQ 964
Score = 77 (32.2 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 66 (28.3 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1322 SPKHT 1326
S HT
Sbjct: 1067 S--HT 1069
Score = 42 (19.8 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 888
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 889 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 936
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 930 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 978
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 428 (155.7 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 94/222 (42%), Positives = 131/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C + L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 146 (56.5 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 81/339 (23%), Positives = 153/339 (45%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 524
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 525 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 578
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 579 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 634
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 635 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 692
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 693 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 731
+ LE L+ L ++ + + + L ++E + W+
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWR 1054
Score = 83 (34.3 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 594 FIRQ-VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA-QMCEFEDIIRASQ 651
F++Q V+ VI Q + K +D + ERA + ++ + + + +I
Sbjct: 829 FVQQLVSLPCVISQTRQVKNLLD------DVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 652 DIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL-VSQSKFL 710
++V LP L ++ E+ A+ WL L L+ P +L ++ L D V +
Sbjct: 883 SLYVELPELPRLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMKKLIDSGVGLAPHH 936
Query: 711 KISLKEQTELEKVINNCERWQNHASSLLQ 739
+ K EL++++ ERW+ A LQ
Sbjct: 937 AVE-KAMAELQELLTVSERWEEKAKVCLQ 964
Score = 77 (32.2 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 66 (28.3 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDIFV 655
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1322 SPKHT 1326
S HT
Sbjct: 1067 S--HT 1069
Score = 42 (19.8 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 888
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 889 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 936
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 930 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 978
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 419 (152.6 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 92/221 (41%), Positives = 129/221 (58%)
Query: 8 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNF 67
VM+ P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 520 VMKELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 579
Query: 68 GLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLK 125
G N AEAVNF ADWLP G Y++ + V SHEEL+ +A LD ++ +
Sbjct: 580 GYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVC 639
Query: 126 RELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACR 185
+E+ + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 640 KEMTLMIEEETRLRETVVQMGVL----MSEEEVFELV-PDDERQCTACRTTCFLSALTCS 694
Query: 186 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C + L YR+ L +L L V
Sbjct: 695 CNPERLVCLYHPSDLCPCPMQNKCLRYRYPLEDLPSLLYGV 735
Score = 135 (52.6 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 78/340 (22%), Positives = 144/340 (42%)
Query: 259 GVRVTMSQLVEQWLSCSLKVLQGLFS--SDAYG--TLLREAEQFLWAGFEMDAVRDMVNK 314
GV+V +Q + W+S + L + D +L +AE + E D R + +
Sbjct: 734 GVKVR-AQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYP--ENDLFRKLRDA 790
Query: 315 LIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDC-VNELLGFD----PLPCNEPGHLI 369
+ E A + L K + S DS + R + EL F LPC
Sbjct: 791 VKEAETCASVAQLLLSKKQKHSR-QSQDSGRTRTKLTMEELKAFVHQLFSLPCVISQARQ 849
Query: 370 LQNYAEEARSLIQEINAAL-SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWR 428
++N ++ + A+ S+L+ L SGL + + E +L Q + A+ W
Sbjct: 850 VKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSGLYVELPELPRLKQELQQAR-WL 908
Query: 429 DSVRKCISNKCPAAIEIDVLYKLESEALDLK----ID--VPETDMLLKMIGQAESCRARC 482
D VR + + P + +DV+ KL + L ++ + E LL + + E C
Sbjct: 909 DEVRSTLLD--PQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVC 966
Query: 483 SEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 542
+A R S+ +E ++ E + +P + LK+ A W A++ I NG +
Sbjct: 967 LQA-RPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEAIQ---NG--NN 1020
Query: 543 HNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REK 581
+ +++L + +G + +++D LP +E ++ A RE+
Sbjct: 1021 YAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRER 1060
Score = 119 (46.9 bits), Expect = 1.7e-43, Sum P(4) = 1.7e-43
Identities = 74/365 (20%), Positives = 155/365 (42%)
Query: 444 EIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELG 503
E D+ KL + + +LL Q S +++ S R ++++ ++ + +L
Sbjct: 780 ENDLFRKLRDAVKEAETCASVAQLLLSK-KQKHSRQSQDSGRTRTKLTMEELKAFVHQLF 838
Query: 504 DFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQV 563
+ + +K D + R + ++ D+ +L ++ G+ L +++
Sbjct: 839 SLPCVISQARQVKNLLDDVEEFHERAQEAMM------DEVPDSSKLQELIDMGSGLYVEL 892
Query: 564 DDLPLVEVELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGV 619
+LP ++ EL++A ++ ++ LD ++++ V L EK +L +
Sbjct: 893 PELPRLKQELQQARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQEL 952
Query: 620 LAAAMRWEERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNS 677
L + RWEE+A L + + M E I+ +++I LP++ ++ + A+ W
Sbjct: 953 LTVSERWEEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKV 1012
Query: 678 ELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ------ 731
E A+ + + LE L++L ++ + + + L +LE + W+
Sbjct: 1013 E-------AIQNGN-NYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRT 1064
Query: 732 ----NHASSLLQDARCLLDKDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHEI 786
N + SLLQ L + DIG G S + + ++L ME L D +
Sbjct: 1065 FLKKNSSYSLLQ---VLSPRTDIGVYGSSKNRRKRAKEL---MEKEKEKDL----DLESL 1114
Query: 787 SELQN 791
SEL++
Sbjct: 1115 SELED 1119
Score = 78 (32.5 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +C+CRK M+ C C +W+H CV L
Sbjct: 1161 RIEEVKFCVCRKTASG-FMLQCELCKDWFHSSCVPL 1195
Score = 77 (32.2 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1303
C++P +K + C CDEW+H CV + ++ E YIC C K + S+P
Sbjct: 1619 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKTMQGPSSP 1673
Score = 75 (31.5 bits), Expect = 5.8e-39, Sum P(4) = 5.8e-39
Identities = 44/201 (21%), Positives = 83/201 (41%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL S + E + VNE +P P
Sbjct: 945 AMAELQELLTVSERWEEKAKVCLQARPRQSMMA---LEGI----VNEAKN---IPAYLPN 994
Query: 367 HLILQNYAEEARSLIQEINAALSA--CSKISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ + AR ++ A + + + +LE L ++ +P+ + +L ++++A
Sbjct: 995 VLALKEALQRARDWTAKVEAIQNGNNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAA 1054
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ WR+ + K + Y L L++ P TD + + G +++ R R E
Sbjct: 1055 RAWRERTGRTFLKKNSS-------YSL------LQVLSPRTD--IGVYGSSKNRRKRAKE 1099
Query: 485 ALRGSMSLKTVEL-LLQELGD 504
+ K ++L L EL D
Sbjct: 1100 LMEKEKE-KDLDLESLSELED 1119
Score = 60 (26.2 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 30/157 (19%), Positives = 63/157 (40%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVF-DRQSNSALDFAL 1149
V+ A + K L D+ +F + + + + + +G++ + L L
Sbjct: 843 VISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSGLYVELPELPRLKQEL 902
Query: 1150 ARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQW 1205
+ W V L + T+ ++ + G+ ++P H +K M EL + +W
Sbjct: 903 QQARWLDEVRSTLLDPQRVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSERW 959
Query: 1206 ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKEL 1242
+ AK + S+ + ++ E +N+P YL L
Sbjct: 960 EEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVL 996
Score = 60 (26.2 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 70/371 (18%), Positives = 145/371 (39%)
Query: 700 LKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA-SSLLQDARCLLD--KDDIGDGLSN 756
L++L+ L + L E L++ + RW + S+LL R LD K I G+
Sbjct: 878 LQELIDMGSGLYVELPELPRLKQELQQA-RWLDEVRSTLLDPQRVTLDVMKKLIDSGVGL 936
Query: 757 SLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSP--SLED 814
+ +E+ + ++ +SE W +KA L P S+
Sbjct: 937 APHHAVEKAMAELQELLT-----------VSE--------RWEEKAKVCLQARPRQSMMA 977
Query: 815 VESLMAVAEGLSTRCFSSM-LWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGC 873
+E ++ A+ + + + L +L W + +E I + L +E + A
Sbjct: 978 LEGIVNEAKNIPAYLPNVLALKEALQRARDWTAK-VEAIQNGNNY--AYLEQLENLSAKG 1034
Query: 874 KGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE 933
+ I + +L S + + W+E+ + F LK S+SL+ L + + +
Sbjct: 1035 RPIPVRLDA-LPQLESQVAAARAWRERTGRTF-LK-KNSSYSLLQVLSPRTDIGVYGSSK 1091
Query: 934 LEKVLSKVDKVENWKQRCKEIVGTS--------VGDKNSLLGLLQKIKQSVHRSLYIYNK 985
+ +K + +E K++ ++ S D +++ + ++ +Q +++
Sbjct: 1092 NRRKRAK-ELMEKEKEKDLDLESLSELEDGLEEARDTAAVVAIFKEREQKEIEAMHTLRA 1150
Query: 986 PH-GSVSMT-------LCMCCESDSKELEFLICSACKDCYHLQC--LRPTEVDRNHAE-- 1033
+ ++M C+C ++ S + L C CKD +H C L T + +
Sbjct: 1151 ANLAKMTMVDRIEEVKFCVCRKTASGFM--LQCELCKDWFHSSCVPLPKTSSQKKGSSWQ 1208
Query: 1034 ----AYICPYC 1040
++CP C
Sbjct: 1209 AKEVKFLCPLC 1219
Score = 60 (26.2 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 80/384 (20%), Positives = 146/384 (38%)
Query: 370 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 424
L+ ++AR L E+ + L +++ ++ L GL P VE +L + ++ +
Sbjct: 898 LKQELQQARWL-DEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 956
Query: 425 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 484
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 957 ERWEEKAKVCLQAR-PRQ-SMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKV-E 1013
Query: 485 ALRGSMSLKTVELL--LQELG-DFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKD 541
A++ + +E L L G V + L L+ + A W R + N
Sbjct: 1014 AIQNGNNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYS 1073
Query: 542 QHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAE 601
V+ I G+S + L+E E +K E + D L+ R A
Sbjct: 1074 LLQVLSPRTDIGVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDG---LEEARDTAAV 1130
Query: 602 AVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL- 660
I + ERE+ I+ L AA + D I + + C + R + F++ L
Sbjct: 1131 VAIFK-EREQKEIEAMHTLRAANLAKMTMVD-RIEEVKFC----VCRKTASGFMLQCELC 1184
Query: 661 -DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKISL 714
D + + S K S + P R LE++ L+ + L + L
Sbjct: 1185 KDWFHSSCVPLPKTSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRL 1244
Query: 715 KEQTELEKVINNCERWQNHASSLL 738
E L+ + WQ+ A L
Sbjct: 1245 PEGEALQCLTERAMSWQDRARQAL 1268
Score = 48 (22.0 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFK------RCKLSDVEEVLAGCKGI--NFSF 880
SL++GVK W+ R E +SA K R L D E+ +
Sbjct: 730 SLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLFRKLRD 789
Query: 881 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSL-MLQLKE-LGEAAAFDC--PELEK 936
V E +++ + L ++Q H + + L M +LK + + + C + +
Sbjct: 790 AVKEAETCASVAQLLLSKKQKHSRQSQDSGRTRTKLTMEELKAFVHQLFSLPCVISQARQ 849
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + V D + L L+
Sbjct: 850 VKNLLDDVEEFHERAQEAMMDEVPDSSKLQELI 882
Score = 47 (21.6 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1231 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1269
Score = 46 (21.3 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 888 TSAIQKHKLWQEQVHQFFNLKCAQQS-------WSLMLQLKELGEAAAFDCPELEKVLSK 940
TS+ +K WQ + +F C + SL++ L++L PE E +
Sbjct: 1198 TSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKL----PVRLPEGEALQCL 1253
Query: 941 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
++ +W+ R ++ + T + +S L L + Q
Sbjct: 1254 TERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1285
Score = 43 (20.2 bits), Expect = 6.8e-36, Sum P(3) = 6.8e-36
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 901 VHQFFNLKC----AQQSWSLMLQLKELGEAA--AF--DCPELEKVLSKVD 942
VHQ F+L C A+Q +L+ ++E E A A + P+ K+ +D
Sbjct: 834 VHQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELID 883
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 431 (156.8 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 95/222 (42%), Positives = 132/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 133 EVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 192
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 193 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 252
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 253 CKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 307
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C +K L YR+ L +L L V
Sbjct: 308 SCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 349
Score = 82 (33.9 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 60/236 (25%), Positives = 107/236 (45%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W V + +S N IE+ V+ LE +A D K PE D+ ++ +
Sbjct: 352 RAQSYDTWVSRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRQLRDAVK 406
Query: 474 QAESCRARCSEAL------RGSM-SLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 524
+AE+C + L R S S +T +L ++EL F + L ++ Q
Sbjct: 407 EAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ---- 462
Query: 525 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 578
+ L D + + R Q ++DE L ++ G+SL +++ +L ++ EL++A
Sbjct: 463 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQARW 520
Query: 579 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERA 630
++ L D + + LD ++++ V L EK +L +L + RWEE+A
Sbjct: 521 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKA 576
Score = 81 (33.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 50/222 (22%), Positives = 96/222 (43%)
Query: 526 IARLNDILVNINGRK-DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALK 584
+ L +L + RK ++++ +L +KE A V L L + K+ H +
Sbjct: 377 LIELRVMLEDAEDRKYPENDLFRQLRDAVKE-AETCASVAQLLLSK---KQKHRQSPDSG 432
Query: 585 ACDTKMPLD----FIRQV-TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA- 638
TK+ ++ F++Q+ + VI Q + K +D + ERA + ++ +
Sbjct: 433 RTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLD------DVEEFHERAQEAMMDETP 486
Query: 639 QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 698
+ + +I ++V LP L ++ E+ A+ WL L L+ P +L ++
Sbjct: 487 DSSKLQMLIDMGSSLYVELPELARLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMK 540
Query: 699 SLKDL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 739
L D V + + K EL++++ ERW+ A LQ
Sbjct: 541 KLIDSGVGLAPHHAVE-KAMAELQELLTVSERWEEKAKVCLQ 581
Score = 57 (25.1 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 51/221 (23%), Positives = 91/221 (41%)
Query: 1062 RSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTCLTD----IVKFESCYLDKDL 1117
+ DL L +L D+E R D+ +++ D E +TC + + K + D
Sbjct: 374 KKDLIELRVMLEDAED--RKYPENDLFRQLRDAVKEAETCASVAQLLLSKKQKHRQSPDS 431
Query: 1118 HVISNKLTIT-LKAREAAGVFD--------RQSNSALDFALARNLWRVRVSKLLEGLTKP 1168
KLT+ LKA +F RQ + LD + R + + T P
Sbjct: 432 GRTRTKLTVEELKAF-VQQLFSLPCVISQARQVKNLLDDV---EEFHERAQEAMMDET-P 486
Query: 1169 TIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELI 1228
++Q + G + + + R K EL + ++W D + + D ++LD + +LI
Sbjct: 487 DSSKLQMLIDMGSSLYVELPELARLK-QELQQ--ARWLDEVRLTLSDPQQVTLDVMKKLI 543
Query: 1229 AEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ 1269
G L + E K++ L + + ++EKA + C Q
Sbjct: 544 DSGVGLAPHHAVE-KAMAELQELLTVSER-WEEKAKV-CLQ 581
Score = 56 (24.8 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 14/82 (17%), Positives = 40/82 (48%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 440 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 499
Query: 454 EALDLKIDVPETDMLLKMIGQA 475
L +++PE L + + QA
Sbjct: 500 S---LYVELPELARLKQELQQA 518
Score = 39 (18.8 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 930 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 978
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 341 DLPSLLYGVKVRAQSYDTWVSRVTEALSASFNHKKDLIELRVMLEDAEDR 390
Score = 39 (18.8 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 837 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 888
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 344 SLLYGVKVRAQSYDTWVSRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRQLR 402
Query: 889 SAIQKHKLWQEQVHQFFNLKCA-QQS-----WSLMLQLKELGEAAA--FDCP----ELEK 936
A+++ + + K +QS L ++EL F P + +
Sbjct: 403 DAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 462
Query: 937 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 969
V + +D VE + +R +E + D + L L+
Sbjct: 463 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 495
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 431 (156.8 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 94/222 (42%), Positives = 132/222 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VMR P+LF++QPDLL QLVT++NP++L+E+GVPVY Q G FV+TFPR+YH+GFN
Sbjct: 516 EVMRELAPELFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFN 575
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ +
Sbjct: 576 QGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMV 635
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+EL + +E RE + + G++ M + E V +++ C CR +LSA+ C
Sbjct: 636 CKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTC 690
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 226
C P VCL H LC C +K L YR+ L +L L V
Sbjct: 691 SCNPERLVCLYHPNDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 100 (40.3 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 84/378 (22%), Positives = 159/378 (42%)
Query: 420 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 473
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 474 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 528
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 529 LNDILVNING--RKDQHNVIDEL--NCILKEGASLRIQVDDLPLVEVELKKAHCR---EK 581
+ ++L ++ + Q ++DE + L+ + + VD + + R E
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMALVVDXXXXSPTKARSQQARWLDEV 905
Query: 582 ALKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKA 638
L D + + LD ++++ V L EK +L +L + RWEE+A L +
Sbjct: 906 RLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARP 965
Query: 639 Q--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLR 696
+ + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RHSVASLESIVNEAKNIPAFLPNILSLKEALQKAREWTAKVE-------AIQSGS-NYAY 1017
Query: 697 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----KDD 749
LE L+ L ++ + + + L ++E + W+ + L+ + LL + D
Sbjct: 1018 LEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTD 1077
Query: 750 IGD-GLSNSLVSKIEQLI 766
IG G + K+++LI
Sbjct: 1078 IGIYGSGKNRRKKVKELI 1095
Score = 78 (32.5 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1255 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1300
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1613 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDS 1664
Score = 78 (32.5 bits), Expect = 3.1e-43, Sum P(3) = 3.1e-43
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1246 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1281
R + +CICRK M+ C C +W+H CV L
Sbjct: 1155 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1189
Score = 77 (32.2 bits), Expect = 3.3e-41, Sum P(4) = 3.3e-41
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 307 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 366
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 939 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 988
Query: 367 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 424
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 989 ILSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1048
Query: 425 KVWRDSVRKCISNKCPAAIEIDVL 448
+ WR+ + K + + VL
Sbjct: 1049 RAWRERTGRTFLKKNSSHTLLQVL 1072
Score = 65 (27.9 bits), Expect = 6.2e-39, Sum P(4) = 6.2e-39
Identities = 83/381 (21%), Positives = 147/381 (38%)
Query: 374 AEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSAKVWR 428
+++AR L E+ LS +++ ++ L GL P VE +L + ++ ++ W
Sbjct: 896 SQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWE 954
Query: 429 DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG 488
+ + C+ + P + L + +EA ++ +P L + + +A A+ G
Sbjct: 955 EKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNILSLKEALQKAREWTAKVEAIQSG 1012
Query: 489 S--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVI 546
S L+ +E L + V + L ++ + A W R + N V+
Sbjct: 1013 SNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVL 1072
Query: 547 DELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVI 604
I G + R +V +L +E E +K E D + L+ R TA V
Sbjct: 1073 SPRTDIGIYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD-TAMVVA 1126
Query: 605 LQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL--DE 662
+ ERE+ I+ L AA + D I + + C I R + F++ L D
Sbjct: 1127 VFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQCELCKDW 1181
Query: 663 VQNE-ISTAKSWL-KNSELFLASAFAVAPASCSLLR---LESLKDLVSQSKFLKISLKEQ 717
N + KS K + A C R LE++ L+ + L + L E
Sbjct: 1182 FHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEG 1241
Query: 718 TELEKVINNCERWQNHASSLL 738
L+ + WQ+ A L
Sbjct: 1242 EALQCLTERAMSWQDRARQAL 1262
Score = 65 (27.9 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 55/245 (22%), Positives = 96/245 (39%)
Query: 1091 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1148
V+ A + K L D+ +F + D S+KL + + + A V D S
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI---DMALVVDXXXXSPTKAR 895
Query: 1149 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1204
+ W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 896 SQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 952
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1264
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 953 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNIL-SLKEA------LQKAREWTAK 1005
Query: 1265 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1321
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1006 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1064
Query: 1322 SPKHT 1326
S HT
Sbjct: 1065 S--HT 1067
Score = 53 (23.7 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 45/269 (16%), Positives = 119/269 (44%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQML----- 877
Query: 454 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 511
+D+ + V D +A S +AR + +R ++S + V L ++++L D V +
Sbjct: 878 --IDMALVV---DXXXXSPTKARSQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 932
Query: 512 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 567
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 933 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNIL 990
Query: 568 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 624
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 991 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1049
Query: 625 RWEERAADILIHKAQMCEFEDIIRASQDI 653
W ER + K ++ DI
Sbjct: 1050 AWRERTGRTFLKKNSSHTLLQVLSPRTDI 1078
Score = 52 (23.4 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1040
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1162 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLC 1213
Score = 47 (21.6 bits), Expect = 1.0e-37, Sum P(3) = 1.0e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 397 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 436
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1225 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1263
Score = 42 (19.8 bits), Expect = 1.5e-42, Sum P(4) = 1.5e-42
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 915 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 974
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1226 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1279
Score = 40 (19.1 bits), Expect = 5.5e-37, Sum P(3) = 5.5e-37
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 786 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 841
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 940 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNILSLKEALQKA 999
Query: 842 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 901
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1000 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1055
Query: 902 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 959
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1056 GRTF-LK-KNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1113
Query: 960 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1016
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1114 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1170
Query: 1017 YHLQC 1021
+ LQC
Sbjct: 1171 FMLQC 1175
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 477 (173.0 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 173/616 (28%), Positives = 279/616 (45%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 721
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 781
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 782 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 839
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 840 PHRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEGYQAEAREALASLPSSPG 899
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L + LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 900 LLQSLLERGQQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPAARRGTLAVMRGL 953
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 954 LVAGASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAEN 1011
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 1012 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1071
Query: 516 KQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKK 575
+ A W + + + +K+ + E+ C + S I+ E+ L K
Sbjct: 1072 ELQVLTAHSWREKASKTFL----KKNSCYTLLEVLCPCADAGSDSIKRSRWMEKELGLYK 1127
Query: 576 AHCREKALKACDTKMP 591
+ L A D + P
Sbjct: 1128 SDTELLGLSAQDLRDP 1143
Score = 147 (56.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 86/387 (22%), Positives = 163/387 (42%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNING-RKDQHNVIDEL--- 549
+++ L EL F M L A+ I + IL + G + + + L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPC-------AMHQIGDVKGILEQVEGYQAEAREALASLPSS 897
Query: 550 ----NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTA 600
+L+ G L ++V + ++ ++++A + + L + L +R V
Sbjct: 898 PGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAG 957
Query: 601 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLP 658
+V +K +L +L A RWEE+A L K E II +++I V LP
Sbjct: 958 ASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLP 1017
Query: 659 SLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ 717
++ ++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEEL 1068
Query: 718 TELEKVINNCERWQNHAS-SLLQDARC 743
+LE + W+ AS + L+ C
Sbjct: 1069 RQLELQVLTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 954 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1013
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAG-VGALQCDLC 1205
Query: 1014 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1072
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 46 (21.3 bits), Expect = 5.6e-40, Sum P(2) = 5.6e-40
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 477 (173.0 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 173/616 (28%), Positives = 279/616 (45%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 721
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 781
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 782 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 839
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 840 PHRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEGYQAEAREALASLPSSPG 899
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L + LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 900 LLQSLLERGQQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPAARRGTLAVMRGL 953
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 954 LVAGASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAEN 1011
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 1012 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1071
Query: 516 KQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKK 575
+ A W + + + +K+ + E+ C + S I+ E+ L K
Sbjct: 1072 ELQVLTAHSWREKASKTFL----KKNSCYTLLEVLCPCADAGSDSIKRSRWMEKELGLYK 1127
Query: 576 AHCREKALKACDTKMP 591
+ L A D + P
Sbjct: 1128 SDTELLGLSAQDLRDP 1143
Score = 147 (56.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 86/387 (22%), Positives = 163/387 (42%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNING-RKDQHNVIDEL--- 549
+++ L EL F M L A+ I + IL + G + + + L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPC-------AMHQIGDVKGILEQVEGYQAEAREALASLPSS 897
Query: 550 ----NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTA 600
+L+ G L ++V + ++ ++++A + + L + L +R V
Sbjct: 898 PGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAG 957
Query: 601 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLP 658
+V +K +L +L A RWEE+A L K E II +++I V LP
Sbjct: 958 ASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLP 1017
Query: 659 SLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ 717
++ ++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEEL 1068
Query: 718 TELEKVINNCERWQNHAS-SLLQDARC 743
+LE + W+ AS + L+ C
Sbjct: 1069 RQLELQVLTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 954 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1013
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAG-VGALQCDLC 1205
Query: 1014 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1072
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 46 (21.3 bits), Expect = 6.1e-40, Sum P(2) = 6.1e-40
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 472 (171.2 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 162/550 (29%), Positives = 254/550 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 546 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 605
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 606 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 665
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 666 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 720
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 721 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 780
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L++Q +C L + S A G + +EA
Sbjct: 781 EVEDGRKRSLEELRALESEARERRFPNSELLQQLKNC-LSEAEACVSR-ALGLVSGQEAG 838
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 839 PHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPG 898
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 899 LLQSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGL 952
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 953 LVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIREAEN 1010
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 1011 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1070
Query: 516 KQYHSDAIFW 525
+ A W
Sbjct: 1071 ELQVLTAHSW 1080
Score = 155 (59.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 60/234 (25%), Positives = 116/234 (49%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 862 LPCAM--HQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 919
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 920 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 978
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 979 AERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDE 1037
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1038 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1086
Score = 147 (56.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 84/382 (21%), Positives = 161/382 (42%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 730 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 785
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 786 RKRSLEELRALESEARERRF--PNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA 843
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 550
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 844 GLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--AYQAEAREALASLPSSPGLLQ 901
Query: 551 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 605
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 902 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 961
Query: 606 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 663
+K +L +L A RWEE+A L K E IIR +++I V LP++ +
Sbjct: 962 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL 1021
Query: 664 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 722
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1022 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1072
Query: 723 VINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1073 QVLTAHSWREKASKTFLKKNSC 1094
Score = 65 (27.9 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1187 CVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSP 1222
Score = 50 (22.7 bits), Expect = 8.0e-40, Sum P(2) = 8.0e-40
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1254 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1297
Score = 46 (21.3 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1253 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1306
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 472 (171.2 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 162/550 (29%), Positives = 254/550 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 721
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 781
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L++Q +C L + S A G + +EA
Sbjct: 782 EVEDGRKRSLEELRALESEARERRFPNSELLQQLKNC-LSEAEACVSR-ALGLVSGQEAG 839
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 840 PHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPG 899
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 900 LLQSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGL 953
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 954 LVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIREAEN 1011
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 1012 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1071
Query: 516 KQYHSDAIFW 525
+ A W
Sbjct: 1072 ELQVLTAHSW 1081
Score = 155 (59.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 60/234 (25%), Positives = 116/234 (49%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 920
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 147 (56.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 84/382 (21%), Positives = 161/382 (42%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 550
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 845 GLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--AYQAEAREALASLPSSPGLLQ 902
Query: 551 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 605
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 903 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 962
Query: 606 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 663
+K +L +L A RWEE+A L K E IIR +++I V LP++ +
Sbjct: 963 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL 1022
Query: 664 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 722
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1023 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 723 VINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1074 QVLTAHSWREKASKTFLKKNSC 1095
Score = 65 (27.9 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 50 (22.7 bits), Expect = 8.1e-40, Sum P(2) = 8.1e-40
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 46 (21.3 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 469 (170.2 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 161/547 (29%), Positives = 254/547 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 721
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 781
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 782 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 839
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCL-----HKAENWSSLPGSDSEKV 346
AG +M A D +N L ++ L ++AE +L S
Sbjct: 840 PHRMAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPG 899
Query: 347 RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYS 402
L + E G L P LQ E+A+ L E+ L+ ++ L LL +
Sbjct: 900 LLQSLLER-G-QQLGVEVPEAQQLQRQVEQAQWL-DEVKRTLAPSARRGTLAVMRGLLVA 956
Query: 403 RASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKI 460
AS P V+ + L + ++ A+ W + C+ + L + EA ++ +
Sbjct: 957 GASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPV 1014
Query: 461 DVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQY 518
+P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1015 HLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQ 1074
Query: 519 HSDAIFW 525
A W
Sbjct: 1075 VLTAHSW 1081
Score = 151 (58.2 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSLLERGQQLGVEVPEAQQ 920
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAQ-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 142 (55.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 82/380 (21%), Positives = 157/380 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRMA 844
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI-NGRKDQHNVIDELNCI 552
+++ L EL F M L D + ++ + L +
Sbjct: 845 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSL 904
Query: 553 LKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQI 607
L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 905 LERGQQLGVEVPEAQQLQRQVEQAQWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSP 964
Query: 608 EREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQN 665
+K +L +L A RWEE+A L K E II +++I V LP++ ++
Sbjct: 965 AVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKE 1024
Query: 666 EISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVI 724
++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE +
Sbjct: 1025 ALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLELQV 1075
Query: 725 NNCERWQNHAS-SLLQDARC 743
W+ AS + L+ C
Sbjct: 1076 LTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 954 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1013
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSTKPSPLASSTTASSATSICVCGQVPAG-VGALQCDLC 1205
Query: 1014 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1072
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTPSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 50 (22.7 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 46 (21.3 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 411 (149.7 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 89/215 (41%), Positives = 128/215 (59%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 506 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 565
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 566 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 625
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KG+ ++ G + P+ V CI C +SA C
Sbjct: 626 HKEMFIMVQEERRLRKALLEKGLSEAKRQGLKTEPKDVRL-----CINCVTTEMMSANPC 680
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
+P F+ + H LC+C + + +L R+TL EL
Sbjct: 681 FVKPFVFILISHXNGLCKCSSSRQYLRSRYTLDEL 715
Score = 103 (41.3 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 380 LIQEINAALSACSKISELELLYSRAS--GLPICIVESEKLSQRISSAKVWRDSVRKCISN 437
LI N L CS S + L SR + LP + KL R S W VR +
Sbjct: 689 LISHXNG-LCKCS--SSRQYLRSRYTLDELPAML---HKLKVRAESFDTWATKVRVALEV 742
Query: 438 KCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS--- 491
+ ++ L LESEA + + P +++L ++ + +AE+C +R + G +
Sbjct: 743 EDGRKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPD 800
Query: 492 -LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN-GRKDQHNVIDEL 549
+ V++ L EL DF M L D + ++ Q + L
Sbjct: 801 RVAGVQMTLAELQDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLL 860
Query: 550 NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVI 604
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 861 QSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASVA 920
Query: 605 LQIEREKLFIDLSGVLAAAMRWEERA 630
+K +L +L A RWEE+A
Sbjct: 921 PSPAVDKAQAELQELLTIAERWEEKA 946
Score = 77 (32.2 bits), Expect = 6.9e-38, Sum P(3) = 6.9e-38
Identities = 27/127 (21%), Positives = 58/127 (45%)
Query: 615 DLSGVLAAAMRWEERAADILIHKAQMCEF-EDIIRASQDIFVVLPSLDEVQNEISTAKSW 673
D+ G+L ++ A + L+ + + ++ Q + V +P ++Q ++ A+ W
Sbjct: 831 DVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-W 889
Query: 674 LKNSELFLASAFAVAPASCSLLR-LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQN 732
L + LA + + +++R L V+ S + K Q EL++++ ERW+
Sbjct: 890 LDEVKRTLAPS--ARRGTLAIMRGLLVAGASVAPSPAVD---KAQAELQELLTIAERWEE 944
Query: 733 HASSLLQ 739
A L+
Sbjct: 945 KAHLCLE 951
Score = 68 (29.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 25/122 (20%), Positives = 56/122 (45%)
Query: 952 KEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1011
++IV G++ G+LQ + + + + + S + ++C+C + + + L C
Sbjct: 1084 RQIVAFKEGEQKEKEGILQLRRTNSAKPSPLASLTTNSSTASICVCGQVPAG-VGALQCD 1142
Query: 1012 ACKDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIE 1070
C+D +H +C+ P + + P ++E ++ +F PL +R L ++
Sbjct: 1143 LCQDWFHGRCVTVPRLLSSQRSSLTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILA 1199
Query: 1071 LL 1072
LL
Sbjct: 1200 LL 1201
Score = 65 (27.9 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 34/132 (25%), Positives = 55/132 (41%)
Query: 370 LQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESEK--LSQRISS 423
LQ E+AR L E+ L+ ++ L LL + AS P V+ + L + ++
Sbjct: 880 LQRQVEQARWL-DEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 424 AKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCS 483
A+ W + C+ + PA +LY + +LK M ++G CR C
Sbjct: 939 AERWEEKAHLCLEARSPALSLPAILY-FQILMENLK------KMAWVVLGIPPLCRYICI 991
Query: 484 EALRGSMSLKTV 495
RG + L V
Sbjct: 992 HRSRGRLILVCV 1003
Score = 56 (24.8 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 39/186 (20%), Positives = 75/186 (40%)
Query: 798 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 851
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 732 WATKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 791
Query: 852 ISA----PCKFK--RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFF 905
+S P + + L+++++ L + + IG++ +++ + +Q + +
Sbjct: 792 VSGQEAGPDRVAGVQMTLAELQDFLGQMNNLPCAMHQ-IGDVKGILEQVEAYQTEAREA- 849
Query: 906 NLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDKN 963
L S L+ L E G+ + PE +++ +V++ W K + S G
Sbjct: 850 -LVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLA 907
Query: 964 SLLGLL 969
+ GLL
Sbjct: 908 IMRGLL 913
Score = 55 (24.4 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSA 1284
C+C + + C C +W+H CV +LLS+
Sbjct: 1127 CVCGQVPAGVGALQCDLCQDWFHGRCVTVPRLLSS 1161
Score = 54 (24.1 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L V +PE E L+ AI W R +L +
Sbjct: 1194 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLAS 1237
Score = 50 (22.7 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVS 991
PE E + ++ +W+ R ++++ + + +LLG L +++Q + +KP S++
Sbjct: 1212 PEGEALQCLTERAISWQGRARQVLASE--EVTALLGRLAELRQRLQAE----SKPEESLA 1265
Score = 49 (22.3 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 660 LDEVQNEISTAKSWLKNSELFLASAFAVAPASCS--LLRLESLKDLVSQSKFLKISLKEQ 717
L ++N +S A++ + + L L S P + + L L+D + Q L ++ +
Sbjct: 771 LQRLKNCLSEAEACVSRA-LGLVSGQEAGPDRVAGVQMTLAELQDFLGQMNNLPCAMHQI 829
Query: 718 TELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQL 765
+++ ++ E +Q +AR L GL SL+ + +QL
Sbjct: 830 GDVKGILEQVEAYQT-------EAREALVSQPSSPGLLQSLLERGQQL 870
Score = 44 (20.5 bits), Expect = 4.3e-38, Sum P(3) = 4.3e-38
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A +L ++ LL +
Sbjct: 1193 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGR 1246
Score = 41 (19.5 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 769 MESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDVESLMAVAEGL 825
++S G LG + E +LQ W + L+ PS +A+ GL
Sbjct: 860 LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLA--PSAR--RGTLAIMRGL 912
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 468 (169.8 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 161/550 (29%), Positives = 254/550 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 506 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 565
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 566 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 625
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 626 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 680
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 681 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 740
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 741 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 798
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 799 PHRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPG 858
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 859 LLQSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGL 912
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 913 LVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAEN 970
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 971 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1030
Query: 516 KQYHSDAIFW 525
+ A W
Sbjct: 1031 ELQVLTAHSW 1040
Score = 154 (59.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 822 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 879
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 880 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 939 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 997
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 998 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1046
Score = 143 (55.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 690 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 745
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 746 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 803
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 550
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 804 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 861
Query: 551 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 605
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 862 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 921
Query: 606 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 663
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 922 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 981
Query: 664 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 722
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 982 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 723 VINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1033 QVLTAHSWREKASKTFLKKNSC 1054
Score = 62 (26.9 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1147 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1182
Score = 50 (22.7 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1214 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1257
Score = 48 (22.0 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1007 LDDLEGLVAVGRDLPVGLE-ELRQL 1030
Score = 46 (21.3 bits), Expect = 5.2e-39, Sum P(2) = 5.2e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1213 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1266
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 468 (169.8 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 161/550 (29%), Positives = 254/550 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 506 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 565
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 566 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 625
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 626 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 680
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 681 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 740
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 741 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 798
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 799 PHRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPG 858
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 859 LLQSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGL 912
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 913 LVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAEN 970
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 971 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1030
Query: 516 KQYHSDAIFW 525
+ A W
Sbjct: 1031 ELQVLTAHSW 1040
Score = 154 (59.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 822 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 879
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 880 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 939 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 997
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 998 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1046
Score = 143 (55.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 690 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 745
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 746 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 803
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 550
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 804 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 861
Query: 551 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 605
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 862 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 921
Query: 606 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 663
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 922 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 981
Query: 664 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 722
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 982 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 723 VINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1033 QVLTAHSWREKASKTFLKKNSC 1054
Score = 62 (26.9 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1147 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1182
Score = 49 (22.3 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 533
L+T+ LL L V +PE E L+ AI W R L
Sbjct: 1214 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQAL 1255
Score = 48 (22.0 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1007 LDDLEGLVAVGRDLPVGLE-ELRQL 1030
Score = 46 (21.3 bits), Expect = 5.2e-39, Sum P(2) = 5.2e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1213 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAFEDVTALLGR 1266
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 468 (169.8 bits), Expect = 2.6e-40, Sum P(3) = 2.6e-40
Identities = 161/550 (29%), Positives = 254/550 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 721
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 781
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 782 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 839
Query: 297 QFLWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDS 343
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 840 PHRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPG 899
Query: 344 EKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----L 399
L LG + + LQ E+AR L E+ L+ ++ L L
Sbjct: 900 LLQSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGL 953
Query: 400 LYSRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALD 457
L + AS P V+ + L + ++ A+ W + C+ + L + EA +
Sbjct: 954 LVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAEN 1011
Query: 458 LKIDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELL 515
+ + +P L + + +A + A E G L +E L+ D V + EL L
Sbjct: 1012 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1071
Query: 516 KQYHSDAIFW 525
+ A W
Sbjct: 1072 ELQVLTAHSW 1081
Score = 154 (59.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 360 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 416
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 920
Query: 417 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 471
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 584
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 143 (55.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 550
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 902
Query: 551 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 605
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 903 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 962
Query: 606 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 663
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 963 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 1022
Query: 664 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 722
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1023 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 723 VINNCERWQNHAS-SLLQDARC 743
+ W+ AS + L+ C
Sbjct: 1074 QVLTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 2.6e-40, Sum P(3) = 2.6e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1285
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 50 (22.7 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 535
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 2.6e-40, Sum P(3) = 2.6e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 46 (21.3 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 465 (168.7 bits), Expect = 5.1e-40, Sum P(2) = 5.1e-40
Identities = 161/547 (29%), Positives = 254/547 (46%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 547 EVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 606
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 607 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAV 666
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 667 HKEMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 721
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRR 242
P VCL H LC+C + + +L YR+TL EL + L V +
Sbjct: 722 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVAL 781
Query: 243 QISSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAE 296
++ + + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 782 EVEDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAG 839
Query: 297 QFLWAGFEMDA--VRDMV---NKLIEGRRWAEGIRDCLHKAENWSS-----LPGSDSEKV 346
AG +M +RD + N L ++ L + E + + L S
Sbjct: 840 PDRVAGLQMTLAELRDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPG 899
Query: 347 RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYS 402
L + E G L P LQ E+AR L E+ L+ ++ L LL +
Sbjct: 900 LLQSLLER-G-QQLGVEVPEAQQLQRQVEQARWL-DEVKRTLAPSARRGTLAIMRGLLVA 956
Query: 403 RASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKI 460
AS P V+ + L + ++ A+ W + C+ + L + EA ++ +
Sbjct: 957 GASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPV 1014
Query: 461 DVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQY 518
+P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1015 HLPNIQSLKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQ 1074
Query: 519 HSDAIFW 525
A W
Sbjct: 1075 VLTAHSW 1081
Score = 157 (60.3 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 351 VNELLG-FDPLPCNEPGHLI--LQNYAEEARSLIQEINAAL-SACSKISELELLYSRASG 406
+ + LG + LPC H I ++ E+ + E AL S S L+ L R
Sbjct: 853 LRDFLGQMNNLPCAM--HQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQ 910
Query: 407 LPICIVESEKLSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVP 463
L + + E+++L +++ A+ W D V++ ++ + AI +L S A +D
Sbjct: 911 LGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKA 969
Query: 464 ETDM--LLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSD 521
+ ++ LL + + E C EA R T+E ++ E + V++P ++ LK+ +
Sbjct: 970 QAELQELLTIAERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQSLKEALAK 1028
Query: 522 AIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-RE 580
A WIA +++I NG D + +D+L ++ G L + +++L +E+++ AH RE
Sbjct: 1029 ARAWIADVDEIQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWRE 1083
Query: 581 KALK 584
KA K
Sbjct: 1084 KASK 1087
Score = 157 (60.3 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 84/380 (22%), Positives = 159/380 (41%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 493
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPDRVA 844
Query: 494 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN-GRKDQHNVIDELNCI 552
+++ L EL DF M L D + ++ Q + L +
Sbjct: 845 GLQMTLAELRDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSL 904
Query: 553 LKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQI 607
L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 905 LERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSP 964
Query: 608 EREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQN 665
+K +L +L A RWEE+A L K E II +++I V LP++ ++
Sbjct: 965 AVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQSLKE 1024
Query: 666 EISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVI 724
++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE +
Sbjct: 1025 ALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLELQV 1075
Query: 725 NNCERWQNHAS-SLLQDARC 743
W+ AS + L+ C
Sbjct: 1076 LTAHSWREKASKTFLKKNSC 1095
Score = 59 (25.8 bits), Expect = 5.1e-40, Sum P(2) = 5.1e-40
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 954 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1013
IV G++ G+LQ + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLALLTTASSTASICVCGQVPAG-VGALQCDLC 1205
Query: 1014 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1072
+D +H +C+ P + + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 55 (24.4 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1253 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSA 1284
C+C + + C C +W+H CV +LLS+
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVTVPRLLSS 1222
Score = 50 (22.7 bits), Expect = 4.5e-39, Sum P(2) = 4.5e-39
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 932 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVS 991
PE E + ++ +W+ R ++++ + + +LLG L +++Q + +KP S++
Sbjct: 1273 PEGEALQCLTERAISWQGRARQVLASE--EVTALLGRLAELRQRLQAE----SKPEESLA 1326
Score = 48 (22.0 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1221 LDKVFELIAEGENLPVYLEKELKSL 1245
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 44 (20.5 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 747
RLE++ L+ + L + L E L+ + WQ A +L ++ LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGR 1307
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 441 (160.3 bits), Expect = 8.0e-40, Sum P(2) = 8.0e-40
Identities = 93/215 (43%), Positives = 134/215 (62%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+VM+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN
Sbjct: 537 EVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 596
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYL 124
G N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ +
Sbjct: 597 QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAV 656
Query: 125 KRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 184
+E+ + +ER R+ L KG+ ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 657 HKEMFIMVQEERRLRKALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALAC 711
Query: 185 RCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
P VCL H LC+C + + +L YR+TL EL
Sbjct: 712 YDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 746
Score = 72 (30.4 bits), Expect = 8.0e-40, Sum P(2) = 8.0e-40
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 381 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 440
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 721 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 776
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS-LKTVE 496
+ L LESEA + + P +++L ++ + + E+C A+ + G ++ + T +
Sbjct: 777 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 834
Query: 497 LLLQEL 502
L L EL
Sbjct: 835 LTLTEL 840
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 374 (136.7 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 87/221 (39%), Positives = 118/221 (53%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F ++ P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAG
Sbjct: 545 FEDALKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAG 604
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSP 122
FN GLN AEAVNFAP DWL G + Y + V SH+ELL V A L +S
Sbjct: 605 FNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSL 664
Query: 123 YLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAV 182
EL+R+Y K++M RE L R G+ S + E + +E +C C+ L++ A+
Sbjct: 665 ATHEELIRIYEKQKMLRELLARLGV--SNRQMQQVMFEKI-PDEQRSCRFCKTTLFMCAL 721
Query: 183 ACRCRPAAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 222
C + C+EH +HLC C T+ YR L +L ++
Sbjct: 722 VCN-KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
Score = 81 (33.6 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1239 EKELKSLRARSMLYCICRKPY-DEKAMIACYQ-CDEWYHIDCV----KLLSAPEIYICAA 1292
E E KS +AR+ C KPY D + C C W+H+ C+ + ++ Y C++
Sbjct: 1408 ESEFKSCQARA-----CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSS 1462
Query: 1293 CKPQAEESSTPQNVD 1307
C A+ ++ + D
Sbjct: 1463 CLDHADSPTSSVSTD 1477
Score = 76 (31.8 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1220 SLDKVFELIAEGENLPVYLEKELKSLR-ARSMLYCIC---RKPYDEKAMIACYQCDEWYH 1275
SLD++ + + + + +++K AR + C C K D ++ + C CD +H
Sbjct: 1172 SLDQIVHHQSSLREMQMRIFEKVKQANSARGLEACSCLGFNKSDDSESTLTCIMCDSEFH 1231
Query: 1276 IDCVK----LLSAPE-IYICAAC----KPQAEESSTPQN 1305
+ C + L PE ++C C +P ++ +T N
Sbjct: 1232 VRCCEWSPFLEKLPEGCFLCVRCLRGQRPVIDDVTTALN 1270
Score = 75 (31.5 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 860 RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCA---QQSWS 915
RC+ +D G + + + LT I K + W EQV + N K A +Q +S
Sbjct: 844 RCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRAKDAIYREQEYS 903
Query: 916 LMLQLKELGEAAAFDCPELEKV--LSKVDKVENWKQRCKEI 954
K + E +D +LE++ L KV ++++W R +++
Sbjct: 904 KEEIEKIIEEGDEYDI-KLEEIDELRKVIQMKDWSDRARKV 943
Score = 73 (30.8 bits), Expect = 2.0e-33, Sum P(4) = 2.0e-33
Identities = 51/316 (16%), Positives = 132/316 (41%)
Query: 413 ESEKLSQRISSAKVWR--DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLK 470
ES+++ + K+ R + + NK P + D ++KL + K + + + LL
Sbjct: 778 ESDEMLEEEGKPKLERIEEFIDSAKQNKYP---QTDQVHKLITIRHTAKSAIEKANQLLF 834
Query: 471 MIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHSDAIFWIARL 529
+ + + RC A + + V L++++ N+ + + L+++ W R
Sbjct: 835 KKVRTRT-KTRCQRADTRT-DTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRA 892
Query: 530 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTK 589
D + ++Q +E+ I++EG I+++++ + ++ ++A K K
Sbjct: 893 KDAIY-----REQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDRARKVTTWK 947
Query: 590 MPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRA 649
D + + E + + L + + + + + ++ QM + +
Sbjct: 948 ATPDMEKDIDFEYKLRYASSDILSL----IRDSPRNPTDGTSKLVFELQQMLRDANTLEV 1003
Query: 650 SQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKF 709
+ F P+LD++Q S +S L+ ++ F + ++ + +K ++ +
Sbjct: 1004 IANNFCENPALDQLQ---SIWQS-LRETDWFYEKYINMV--RYEIIHVAKIKSMIDAAIP 1057
Query: 710 LKISLKEQTELEKVIN 725
+ +T+L+K++N
Sbjct: 1058 VLSEFDLKTQLQKIVN 1073
Score = 62 (26.9 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 626 WEERAADILIH--KAQMCEFEDII-RASQDIFVVLPSLDEVQNEIS---TAKSWL-KNSE 678
W+E + ++L K ++ E+ I A Q+ + P D+V I+ TAKS + K ++
Sbjct: 775 WKEESDEMLEEEGKPKLERIEEFIDSAKQNKY---PQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 679 LFLASAFAVAPASC----SLLRLESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNH 733
L C + E ++ L+ Q + + +L + LEK + E W+N
Sbjct: 832 LLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNR 891
Query: 734 ASSLL 738
A +
Sbjct: 892 AKDAI 896
Score = 62 (26.9 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 698 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ-DARCLLDKDDIGDGLSN 756
E ++ ++ + I L+E EL KVI + W + A + A ++KD +
Sbjct: 905 EEIEKIIEEGDEYDIKLEEIDELRKVIQ-MKDWSDRARKVTTWKATPDMEKDIDFEYKLR 963
Query: 757 SLVSKIEQLITSMESAANCGLS-LGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 815
S I LI G S L F+ ++ L++A +TL A +F +P+L+ +
Sbjct: 964 YASSDILSLIRDSPRNPTDGTSKLVFELQQM--LRDA-NTLEVI--ANNFCE-NPALDQL 1017
Query: 816 ESL-MAVAE-GLSTRCFSSMLWNSLIHGVK---WLKRALEVISA-PCKFKRCKLSDVEEV 869
+S+ ++ E + +M+ +IH K + A+ V+S K + K+ +VE
Sbjct: 1018 QSIWQSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQKIVNVEIT 1077
Query: 870 LAGCKGINFSFPV---VIGE-----LTSAIQKHKLWQEQVHQFFNLKCAQQS-WSLMLQL 920
L+ I+ +F + G + I + +++ F A + + ++ +
Sbjct: 1078 LSKAAEISKAFETSKCLNGSEEHLGILDMISTMNAFTQRIAILFKPNNAYHNLFEILSER 1137
Query: 921 KELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSLLGLLQKIKQSVHRS 979
+L A L V + W Q + E + V ++SL + +I + V ++
Sbjct: 1138 DDLTPLAEGQTIPLYFQGGAVHPSDEWHQMKEFESLDQIVHHQSSLREMQMRIFEKVKQA 1197
Query: 980 LYIYNKPHGSVSMTLCMCC---ESDSKELEFLICSACKDCYHLQCLRPTE-VDRNHAEAY 1035
N G + C C +SD E L C C +H++C + +++ +
Sbjct: 1198 ----NSARG---LEACSCLGFNKSDDSE-STLTCIMCDSEFHVRCCEWSPFLEKLPEGCF 1249
Query: 1036 ICPYC 1040
+C C
Sbjct: 1250 LCVRC 1254
Score = 61 (26.5 bits), Expect = 5.6e-33, Sum P(3) = 5.6e-33
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 997 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + +++C A CK+ +H+ CL T + N Y C C
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSC 1463
Score = 57 (25.1 bits), Expect = 5.5e-34, Sum P(5) = 5.5e-34
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGS-----QWADV 1208
W +V ++ K I + Q Y KE + I D Y KL E++ + W+D
Sbjct: 881 WMEQV-EMWRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDR 939
Query: 1209 AKKVVLDSGALSLDK 1223
A+KV ++K
Sbjct: 940 ARKVTTWKATPDMEK 954
Score = 50 (22.7 bits), Expect = 6.0e-34, Sum P(4) = 6.0e-34
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1246
W + AK + S +++ ++I EG+ + LE E+ LR
Sbjct: 888 WRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLE-EIDELR 928
Score = 50 (22.7 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 889 SAIQK-HKLWQEQVHQFFNLKCAQQSWSLMLQ-LKELGEAA-AFDCPELEKVLSKVDK-- 943
SAI+K ++L ++V +C + + ++ L E A DC L ++ K++K
Sbjct: 824 SAIEKANQLLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDC-NLTVIIDKLEKWM 882
Query: 944 --VENWKQRCKEIV 955
VE W+ R K+ +
Sbjct: 883 EQVEMWRNRAKDAI 896
Score = 45 (20.9 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 1152 NLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKK 1211
N W+ ++LE KP + +I+ ++ + N P+ KL+ + + A +
Sbjct: 773 NGWKEESDEMLEEEGKPKLERIEEFI-DSAKQNKYPQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1212 VV 1213
++
Sbjct: 832 LL 833
Score = 44 (20.5 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1071 LLSDSEFFCRGIEAKDVLQEVVDVALECKTCL 1102
++ DSEF R E L+++ + C CL
Sbjct: 1224 IMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCL 1255
Score = 39 (18.8 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1319 KTPSPKHTNSRKKLRKAE 1336
K PS H + KK RK +
Sbjct: 1379 KRPSVSHKETSKKSRKRQ 1396
Score = 38 (18.4 bits), Expect = 5.5e-34, Sum P(5) = 5.5e-34
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 1228 IAEGENLPVYLE 1239
+AEG+ +P+Y +
Sbjct: 1143 LAEGQTIPLYFQ 1154
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 374 (136.7 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 87/221 (39%), Positives = 118/221 (53%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F ++ P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAG
Sbjct: 545 FEDALKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAG 604
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSP 122
FN GLN AEAVNFAP DWL G + Y + V SH+ELL V A L +S
Sbjct: 605 FNEGLNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSL 664
Query: 123 YLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAV 182
EL+R+Y K++M RE L R G+ S + E + +E +C C+ L++ A+
Sbjct: 665 ATHEELIRIYEKQKMLRELLARLGV--SNRQMQQVMFEKI-PDEQRSCRFCKTTLFMCAL 721
Query: 183 ACRCRPAAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 222
C + C+EH +HLC C T+ YR L +L ++
Sbjct: 722 VCN-KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
Score = 81 (33.6 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1239 EKELKSLRARSMLYCICRKPY-DEKAMIACYQ-CDEWYHIDCV----KLLSAPEIYICAA 1292
E E KS +AR+ C KPY D + C C W+H+ C+ + ++ Y C++
Sbjct: 1408 ESEFKSCQARA-----CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSS 1462
Query: 1293 CKPQAEESSTPQNVD 1307
C A+ ++ + D
Sbjct: 1463 CLDHADSPTSSVSTD 1477
Score = 76 (31.8 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1220 SLDKVFELIAEGENLPVYLEKELKSLR-ARSMLYCIC---RKPYDEKAMIACYQCDEWYH 1275
SLD++ + + + + +++K AR + C C K D ++ + C CD +H
Sbjct: 1172 SLDQIVHHQSSLREMQMRIFEKVKQANSARGLEACSCLGFNKSDDSESTLTCIMCDSEFH 1231
Query: 1276 IDCVK----LLSAPE-IYICAAC----KPQAEESSTPQN 1305
+ C + L PE ++C C +P ++ +T N
Sbjct: 1232 VRCCEWSPFLEKLPEGCFLCVRCLRGQRPVIDDVTTALN 1270
Score = 75 (31.5 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 860 RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCA---QQSWS 915
RC+ +D G + + + LT I K + W EQV + N K A +Q +S
Sbjct: 844 RCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRAKDAIYREQEYS 903
Query: 916 LMLQLKELGEAAAFDCPELEKV--LSKVDKVENWKQRCKEI 954
K + E +D +LE++ L KV ++++W R +++
Sbjct: 904 KEEIEKIIEEGDEYDI-KLEEIDELRKVIQMKDWSDRARKV 943
Score = 73 (30.8 bits), Expect = 2.0e-33, Sum P(4) = 2.0e-33
Identities = 51/316 (16%), Positives = 132/316 (41%)
Query: 413 ESEKLSQRISSAKVWR--DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLK 470
ES+++ + K+ R + + NK P + D ++KL + K + + + LL
Sbjct: 778 ESDEMLEEEGKPKLERIEEFIDSAKQNKYP---QTDQVHKLITIRHTAKSAIEKANQLLF 834
Query: 471 MIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHSDAIFWIARL 529
+ + + RC A + + V L++++ N+ + + L+++ W R
Sbjct: 835 KKVRTRT-KTRCQRADTRT-DTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRA 892
Query: 530 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTK 589
D + ++Q +E+ I++EG I+++++ + ++ ++A K K
Sbjct: 893 KDAIY-----REQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDRARKVTTWK 947
Query: 590 MPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRA 649
D + + E + + L + + + + + ++ QM + +
Sbjct: 948 ATPDMEKDIDFEYKLRYASSDILSL----IRDSPRNPTDGTSKLVFELQQMLRDANTLEV 1003
Query: 650 SQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKF 709
+ F P+LD++Q S +S L+ ++ F + ++ + +K ++ +
Sbjct: 1004 IANNFCENPALDQLQ---SIWQS-LRETDWFYEKYINMV--RYEIIHVAKIKSMIDAAIP 1057
Query: 710 LKISLKEQTELEKVIN 725
+ +T+L+K++N
Sbjct: 1058 VLSEFDLKTQLQKIVN 1073
Score = 62 (26.9 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 626 WEERAADILIH--KAQMCEFEDII-RASQDIFVVLPSLDEVQNEIS---TAKSWL-KNSE 678
W+E + ++L K ++ E+ I A Q+ + P D+V I+ TAKS + K ++
Sbjct: 775 WKEESDEMLEEEGKPKLERIEEFIDSAKQNKY---PQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 679 LFLASAFAVAPASC----SLLRLESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNH 733
L C + E ++ L+ Q + + +L + LEK + E W+N
Sbjct: 832 LLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNR 891
Query: 734 ASSLL 738
A +
Sbjct: 892 AKDAI 896
Score = 62 (26.9 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 698 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ-DARCLLDKDDIGDGLSN 756
E ++ ++ + I L+E EL KVI + W + A + A ++KD +
Sbjct: 905 EEIEKIIEEGDEYDIKLEEIDELRKVIQ-MKDWSDRARKVTTWKATPDMEKDIDFEYKLR 963
Query: 757 SLVSKIEQLITSMESAANCGLS-LGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 815
S I LI G S L F+ ++ L++A +TL A +F +P+L+ +
Sbjct: 964 YASSDILSLIRDSPRNPTDGTSKLVFELQQM--LRDA-NTLEVI--ANNFCE-NPALDQL 1017
Query: 816 ESL-MAVAE-GLSTRCFSSMLWNSLIHGVK---WLKRALEVISA-PCKFKRCKLSDVEEV 869
+S+ ++ E + +M+ +IH K + A+ V+S K + K+ +VE
Sbjct: 1018 QSIWQSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQKIVNVEIT 1077
Query: 870 LAGCKGINFSFPV---VIGE-----LTSAIQKHKLWQEQVHQFFNLKCAQQS-WSLMLQL 920
L+ I+ +F + G + I + +++ F A + + ++ +
Sbjct: 1078 LSKAAEISKAFETSKCLNGSEEHLGILDMISTMNAFTQRIAILFKPNNAYHNLFEILSER 1137
Query: 921 KELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSLLGLLQKIKQSVHRS 979
+L A L V + W Q + E + V ++SL + +I + V ++
Sbjct: 1138 DDLTPLAEGQTIPLYFQGGAVHPSDEWHQMKEFESLDQIVHHQSSLREMQMRIFEKVKQA 1197
Query: 980 LYIYNKPHGSVSMTLCMCC---ESDSKELEFLICSACKDCYHLQCLRPTE-VDRNHAEAY 1035
N G + C C +SD E L C C +H++C + +++ +
Sbjct: 1198 ----NSARG---LEACSCLGFNKSDDSE-STLTCIMCDSEFHVRCCEWSPFLEKLPEGCF 1249
Query: 1036 ICPYC 1040
+C C
Sbjct: 1250 LCVRC 1254
Score = 61 (26.5 bits), Expect = 5.6e-33, Sum P(3) = 5.6e-33
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 997 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C + + +++C A CK+ +H+ CL T + N Y C C
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSC 1463
Score = 57 (25.1 bits), Expect = 5.5e-34, Sum P(5) = 5.5e-34
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGS-----QWADV 1208
W +V ++ K I + Q Y KE + I D Y KL E++ + W+D
Sbjct: 881 WMEQV-EMWRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDR 939
Query: 1209 AKKVVLDSGALSLDK 1223
A+KV ++K
Sbjct: 940 ARKVTTWKATPDMEK 954
Score = 50 (22.7 bits), Expect = 6.0e-34, Sum P(4) = 6.0e-34
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1205 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1246
W + AK + S +++ ++I EG+ + LE E+ LR
Sbjct: 888 WRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLE-EIDELR 928
Score = 50 (22.7 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 889 SAIQK-HKLWQEQVHQFFNLKCAQQSWSLMLQ-LKELGEAA-AFDCPELEKVLSKVDK-- 943
SAI+K ++L ++V +C + + ++ L E A DC L ++ K++K
Sbjct: 824 SAIEKANQLLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDC-NLTVIIDKLEKWM 882
Query: 944 --VENWKQRCKEIV 955
VE W+ R K+ +
Sbjct: 883 EQVEMWRNRAKDAI 896
Score = 45 (20.9 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 1152 NLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKK 1211
N W+ ++LE KP + +I+ ++ + N P+ KL+ + + A +
Sbjct: 773 NGWKEESDEMLEEEGKPKLERIEEFI-DSAKQNKYPQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1212 VV 1213
++
Sbjct: 832 LL 833
Score = 44 (20.5 bits), Expect = 4.1e-35, Sum P(5) = 4.1e-35
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1071 LLSDSEFFCRGIEAKDVLQEVVDVALECKTCL 1102
++ DSEF R E L+++ + C CL
Sbjct: 1224 IMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCL 1255
Score = 39 (18.8 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1319 KTPSPKHTNSRKKLRKAE 1336
K PS H + KK RK +
Sbjct: 1379 KRPSVSHKETSKKSRKRQ 1396
Score = 38 (18.4 bits), Expect = 5.5e-34, Sum P(5) = 5.5e-34
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 1228 IAEGENLPVYLE 1239
+AEG+ +P+Y +
Sbjct: 1143 LAEGQTIPLYFQ 1154
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 422 (153.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 90/233 (38%), Positives = 133/233 (57%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F VM+ LPDLF+ QPDLL QLVT L+P +L E GVPVY +Q G F++TFP++YH+G
Sbjct: 340 FENVMKKRLPDLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSG 399
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKS--------DL 116
FN G NCAEAVN AP DWL HG + Y + + + LSH++LL A L
Sbjct: 400 FNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSL 459
Query: 117 DSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGP-------RKCPEYVGTEEDPT 169
K +P + R RV +++ + + + ++ ++ + RK + +
Sbjct: 460 SKKKTPVIAR-WKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERE 518
Query: 170 CIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
C +C L++SA +C+C P F CL H + LC C+++ ++L RHTL EL+ L
Sbjct: 519 CFLCFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDELWAL 571
Score = 43 (20.2 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 1041 QYFESESVSQFGGSPLRFGGK 1061
+Y+ ++V FG P++ G K
Sbjct: 871 EYWNQKAVKLFGAEPIKEGEK 891
Score = 42 (19.8 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 25/116 (21%), Positives = 54/116 (46%)
Query: 1107 KFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLT 1166
K + C KD + +N+L+++++ + + ++ + A+ ++ RV K L L
Sbjct: 713 KVDGCLGGKDQNAATNRLSLSVELLSSGSLVVKKLWCSKQ-AIYPKGFKSRV-KFLSVLD 770
Query: 1167 KPTIGQIQNYLKE----GLL---MNISPKDHYRQKLMELNRIGSQWADVAKKVVLD 1215
PT + NY+ E GLL +S +D+ + ++ W V +++ L+
Sbjct: 771 -PT--NLTNYISEVLDAGLLGPLFRVSVEDYPTENFSNVSA-EKCWQMVTQRLKLE 822
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 334 (122.6 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
Identities = 83/214 (38%), Positives = 113/214 (52%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F MR ++P+LF QPDLLFQLVT+L P L + GV VY++ Q G FVITFP++YHAG
Sbjct: 679 FEAAMREAIPELFATQPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAG 738
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCV----VAKSDLDSKV 120
FN G N EAVNFAP+DW P G G + QQ+ + SH+ELL +A L +
Sbjct: 739 FNHGFNFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQT 798
Query: 121 SPYLKRELLRVYTKERMWRERLWRK------------GIIKSTPMGPRKCPEYVGTEEDP 168
+ +L L R++++E R+ K G S+ + K + EE+
Sbjct: 799 AKWLAPALERIHSRELAQRQAFVTKHKDLAQHSCAITGGEDSSCLLSFKVEDEDVPEEEY 858
Query: 169 TCIICRQYLYLSAVACRCRPAAFVCLEH-WEHLC 201
C C+ Y YLS C + +CL H H C
Sbjct: 859 QCGYCKVYTYLSRFKC-LKSGQVLCLLHAGHHAC 891
Score = 109 (43.4 bits), Expect = 3.3e-31, Sum P(5) = 3.3e-31
Identities = 76/360 (21%), Positives = 153/360 (42%)
Query: 626 WEERAADILIHKA--QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLA- 682
WEE+ IL +A + +++ + I LPSL ++ + W++++ + A
Sbjct: 933 WEEKYDKILSEEATPSLKSLRNLLNEGEKIPFNLPSLAMLKTFVERCNRWVEDAANYTAR 992
Query: 683 ---------SAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNH 733
++ + S ++ +++ S S K+ TE E++ +C
Sbjct: 993 KQQNRRKTDKSWRASIGKASDIQEPKDREVRSVSHMYKL----MTEAEQLGFDCPE---- 1044
Query: 734 ASSLLQDARCL-LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNA 792
S L + A + + +++ L +S S Q I ++E G S D E+ +L +
Sbjct: 1045 ISQLQERAEAIKVFQENAQRVLEHSSTST--QSIDTVEELLEEGHSFNVDIPEVEKLSHV 1102
Query: 793 CSTLHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSML--WNSLIH-GVKWLKRAL 849
L W +KA SL +V+ L+ L R ++ + +N ++ G +W ++A
Sbjct: 1103 LDQLKWSQKARQKRGTFISLNEVKELIEEGNRLGIRSYNDHMVHYNDQLNAGEQWERKAQ 1162
Query: 850 EVISAPCKFKRCKLSDVEEVLAGCKGINFSFPV---VIGELTSAIQKHKLWQEQVHQFFN 906
E+I+A +L E L+ +N + PV + E+ + K + Q+ Q N
Sbjct: 1163 EIINADA-IHYAQL----EALSQQATVN-ALPVSQATLAEVDRILFKQREALGQI-QDLN 1215
Query: 907 LKCAQ----------QSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVG 956
+C + +M +++EL + PELEK + + E+W ++ K++ G
Sbjct: 1216 ARCRNADHRKRPMYAEVCEIMKKVEEL-QHKPNGTPELEK---EQRRHEDWMRKGKKLFG 1271
Score = 103 (41.3 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
Identities = 37/119 (31%), Positives = 53/119 (44%)
Query: 414 SEKLSQRISSAKVWRDSVRKCISNKCPAAIEI-DV--LYKLESEALDLKIDVPETDMLLK 470
+ K R + K WR S+ K + P E+ V +YKL +EA L D PE L +
Sbjct: 991 ARKQQNRRKTDKSWRASIGKASDIQEPKDREVRSVSHMYKLMTEAEQLGFDCPEISQLQE 1050
Query: 471 MIGQAESCRARCSEALRGS----MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 525
+ + L S S+ TVE LL+E F V++PE+E L D + W
Sbjct: 1051 RAEAIKVFQENAQRVLEHSSTSTQSIDTVEELLEEGHSFNVDIPEVEKLSHV-LDQLKW 1108
Score = 95 (38.5 bits), Expect = 8.6e-30, Sum P(5) = 8.6e-30
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 453
+S + L + A L E +L +R + KV++++ ++ + + + ID + +L
Sbjct: 1025 VSHMYKLMTEAEQLGFDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSIDTVEELLE 1084
Query: 454 EALDLKIDVPETDMLLKMIGQAE-SCRARCSEALRGS-MSLKTVELLLQE 501
E +D+PE + L ++ Q + S +AR RG+ +SL V+ L++E
Sbjct: 1085 EGHSFNVDIPEVEKLSHVLDQLKWSQKARQK---RGTFISLNEVKELIEE 1131
Score = 92 (37.4 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1251 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK---PQAEESSTP 1303
++CICR+ + MI C C EWYH C+K+ + + Y C C P ++S P
Sbjct: 1332 VFCICRRT-EAGMMIECELCHEWYHGKCLKVARGKIREDDKYTCPICDWRVPIPRDASRP 1390
Query: 1304 QNVD 1307
D
Sbjct: 1391 NLED 1394
Score = 73 (30.8 bits), Expect = 5.0e-28, Sum P(6) = 5.0e-28
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 472 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 531
IG+A + +R S+ + L+ E + PE+ L++ ++AI
Sbjct: 1008 IGKASDIQEPKDREVR---SVSHMYKLMTEAEQLGFDCPEISQLQE-RAEAIKVFQENAQ 1063
Query: 532 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 591
++ + Q ID + +L+EG S + + ++ + L + +KA + T +
Sbjct: 1064 RVLEHSSTSTQS--IDTVEELLEEGHSFNVDIPEVEKLSHVLDQLKWSQKARQKRGTFIS 1121
Query: 592 LDFIRQVTAEAVILQIER-EKLFIDLSGVLAAAMRWEERAADIL----IHKAQM 640
L+ ++++ E L I + + L A +WE +A +I+ IH AQ+
Sbjct: 1122 LNEVKELIEEGNRLGIRSYNDHMVHYNDQLNAGEQWERKAQEIINADAIHYAQL 1175
Score = 71 (30.1 bits), Expect = 3.3e-31, Sum P(5) = 3.3e-31
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1042
C+C +++ + + C C + YH +CL+ + Y CP C +
Sbjct: 1334 CICRRTEAGMM--IECELCHEWYHGKCLKVARGKIREDDKYTCPICDW 1379
Score = 65 (27.9 bits), Expect = 4.3e-31, Sum P(4) = 4.3e-31
Identities = 34/128 (26%), Positives = 65/128 (50%)
Query: 1114 DKDLHVISNKLTITLKAREAAGVFDRQSNSAL-DFALARNLWRVRVSKLLEGLTKPT--I 1170
D+++ +S+ + +A E G FD S L + A A +++ ++LE + T I
Sbjct: 1019 DREVRSVSHMYKLMTEA-EQLG-FDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSI 1076
Query: 1171 GQIQNYLKEGLLMNISPKDHYRQKLME-LNRIGSQWADVAKKVVLDSGA-LSLDKVFELI 1228
++ L+EG N+ + +KL L+++ +W+ A++ G +SL++V ELI
Sbjct: 1077 DTVEELLEEGHSFNVDIPEV--EKLSHVLDQL--KWSQKARQ---KRGTFISLNEVKELI 1129
Query: 1229 AEGENLPV 1236
EG L +
Sbjct: 1130 EEGNRLGI 1137
Score = 65 (27.9 bits), Expect = 9.4e-27, Sum P(5) = 9.4e-27
Identities = 64/301 (21%), Positives = 125/301 (41%)
Query: 291 LLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDC 350
L+ EAEQ GF+ + + + AE I+ A+ L S + +D
Sbjct: 1031 LMTEAEQL---GFDCPEISQLQER-------AEAIKVFQENAQR--VLEHSSTSTQSIDT 1078
Query: 351 VNELL----GFD-PLPCNEP-GHLILQ-NYAEEARSLIQEINAALSACSKISELELLYSR 403
V ELL F+ +P E H++ Q ++++AR Q+ +S ++E++ L
Sbjct: 1079 VEELLEEGHSFNVDIPEVEKLSHVLDQLKWSQKAR---QKRGTFIS----LNEVKELIEE 1131
Query: 404 ASGLPICIVESEKL--SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES-EALDL-K 459
+ L I + + ++++ + W ++ I+ +++ L + + AL + +
Sbjct: 1132 GNRLGIRSYNDHMVHYNDQLNAGEQWERKAQEIINADAIHYAQLEALSQQATVNALPVSQ 1191
Query: 460 IDVPETDMLL----KMIGQAESCRARCSEA--LRGSMSLKTVELL--LQELGDFTVNMPE 511
+ E D +L + +GQ + ARC A + M + E++ ++EL PE
Sbjct: 1192 ATLAEVDRILFKQREALGQIQDLNARCRNADHRKRPMYAEVCEIMKKVEELQHKPNGTPE 1251
Query: 512 LELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEV 571
LE ++ H D W+ + + N H + L +L+ + D P V
Sbjct: 1252 LEKEQRRHED---WMRKGKKLFGKTNA--PLHILKSHLEYVLERNSDCFDIGHDKPRVPA 1306
Query: 572 E 572
E
Sbjct: 1307 E 1307
Score = 59 (25.8 bits), Expect = 3.1e-27, Sum P(6) = 3.1e-27
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 912 QSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSL 965
+S S M +L E FDCPE+ ++ + + ++ +++ + ++ S S+
Sbjct: 1023 RSVSHMYKLMTEAEQLGFDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSI 1076
Score = 54 (24.1 bits), Expect = 4.3e-31, Sum P(4) = 4.3e-31
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 491 SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQH 543
SLK++ LL E N+P L +LK + W+ + N RK Q+
Sbjct: 948 SLKSLRNLLNEGEKIPFNLPSLAMLKTFVERCNRWV----EDAANYTARKQQN 996
Score = 52 (23.4 bits), Expect = 3.3e-29, Sum P(3) = 3.3e-29
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1131 REAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYLKEG 1180
R+A + D A W + K+L P++ ++N L EG
Sbjct: 910 RKAEDIIAATYKKVADKASVPEAWEEKYDKILSEEATPSLKSLRNLLNEG 959
Score = 51 (23.0 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 1193 QKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
+K+ + + W + K++ + SL + L+ EGE +P L
Sbjct: 921 KKVADKASVPEAWEEKYDKILSEEATPSLKSLRNLLNEGEKIPFNL 966
Score = 49 (22.3 bits), Expect = 2.3e-28, Sum P(5) = 2.3e-28
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 689 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNH 733
P S LE L + L +E+ L+++I+N + ++NH
Sbjct: 1384 PRDASRPNLEDLLSWYDEIPGLPFQPEEEGVLKQIIDNAQDFRNH 1428
Score = 49 (22.3 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 394 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDV----LY 449
+ +L Y GLP E L Q I +A+ +R+ + +N A E++ L
Sbjct: 1392 LEDLLSWYDEIPGLPFQPEEEGVLKQIIDNAQDFRNHIGPYCNNPMATASEVETQRFYLR 1451
Query: 450 KLE 452
KLE
Sbjct: 1452 KLE 1454
Score = 48 (22.0 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 1169 TIGQIQNYLKEGLLMNI-SPKDHYRQKLMELNRIGSQWADVAKKVV 1213
++ +++ ++EG + I S DH +LN G QW A++++
Sbjct: 1121 SLNEVKELIEEGNRLGIRSYNDHMVHYNDQLNA-GEQWERKAQEII 1165
Score = 48 (22.0 bits), Expect = 5.0e-28, Sum P(6) = 5.0e-28
Identities = 18/87 (20%), Positives = 37/87 (42%)
Query: 399 LLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDL 458
+LY +A I +K++ + S + W + K +S + +++ L L +E +
Sbjct: 907 ILYRKAED--IIAATYKKVADKASVPEAWEEKYDKILSEEATPSLKS--LRNLLNEGEKI 962
Query: 459 KIDVPETDMLLKMIGQAESCRARCSEA 485
++P ML + E C +A
Sbjct: 963 PFNLPSLAMLKTFV---ERCNRWVEDA 986
Score = 40 (19.1 bits), Expect = 3.3e-31, Sum P(5) = 3.3e-31
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 1295 PQAEESSTPQNVDGGRTNAEFLEPKTP--SPK--HTN-SRKKLRKAEP 1337
P + + STP G T+ P P SP H L +A+P
Sbjct: 1575 PSSSQPSTPGLPMAGSTHGHASRPSEPGQSPSLVHRQPGESPLNRADP 1622
Score = 38 (18.4 bits), Expect = 3.3e-31, Sum P(5) = 3.3e-31
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 1050 QFGGSPLRFGGKRS 1063
Q GS RFGG RS
Sbjct: 1557 QTPGSAHRFGGDRS 1570
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 334 (122.6 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 79/213 (37%), Positives = 112/213 (52%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F + MR ++P+LF+ QPDLLFQLVT++ P L + GV VY++ Q G FVITFP++YHAG
Sbjct: 673 FEEAMRQAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAG 732
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYL 124
FN G N EAVNFAP DW P G G + Q + + SH+ELL A D + +L
Sbjct: 733 FNHGFNFNEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKWL 792
Query: 125 KRELLRVYTKERMWRERLWRK---------GIIK--STPMGPRKCPEYVGT----EEDPT 169
L R ++E R ++ ++ S P G + + EED
Sbjct: 793 APALQRTCSRELAERASFAKRHQEATPHNCALLTDDSAPTGECQLGFLIEDKDLPEEDYQ 852
Query: 170 CIICRQYLYLSAVACRCRPAAFVCLEHWE-HLC 201
C C+ Y++L+ C + +CL H + H C
Sbjct: 853 CHYCKAYIFLTQFKCH-KSGKTLCLVHLDAHDC 884
Score = 98 (39.6 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 49/198 (24%), Positives = 85/198 (42%)
Query: 325 IRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSL--IQ 382
++ + K + S +P + +K LD +L DP P + H +L + L +Q
Sbjct: 909 LKSMVLKVQERSRIPEAWGQK--LD---NILEDDPKPQLKVLHNLLNEGEKIPYHLPGLQ 963
Query: 383 EINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC--ISNKCP 440
E+ A + C K E Y + K R + K WR + K + +
Sbjct: 964 ELAAFVQRCDKWVEEATNYI-----------TRKQQNRRKNEKAWRKTTSKASQLEERDR 1012
Query: 441 AAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG--SMSLKTVELL 498
++ +Y L +EA L D P+ L + + E R S AL + S++ VE L
Sbjct: 1013 EVRRVENIYALLAEADKLSFDCPQMAALEEKTREIEKFRLDVSAALANPHTRSIQEVEEL 1072
Query: 499 LQELGDFTVNMPELELLK 516
++ +F V++PE+E L+
Sbjct: 1073 VENSRNFNVDLPEVEDLE 1090
Score = 86 (35.3 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1247 ARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP----EIYICAAC 1293
A+ ++CICR + MI C C EWYH C+K+ + Y C C
Sbjct: 1318 AKRDVFCICRHS-EAGMMIECEICGEWYHGKCLKIARGKVKECDKYTCPIC 1367
Score = 74 (31.1 bits), Expect = 3.8e-32, Sum P(3) = 3.8e-32
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1042
C+C S++ + + C C + YH +CL+ + Y CP C +
Sbjct: 1324 CICRHSEAGMM--IECEICGEWYHGKCLKIARGKVKECDKYTCPICDW 1369
Score = 71 (30.1 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 67/381 (17%), Positives = 153/381 (40%)
Query: 626 WEERAADILIH--KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 683
W ++ +IL K Q+ +++ + I LP L E+ + W++ + ++
Sbjct: 926 WGQKLDNILEDDPKPQLKVLHNLLNEGEKIPYHLPGLQELAAFVQRCDKWVEEATNYITR 985
Query: 684 AFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ-----TELEKVINNCERWQNHASSLL 738
+ R + K + + ++ E E +K+ +C + + L
Sbjct: 986 KQQNRRKNEKAWRKTTSKASQLEERDREVRRVENIYALLAEADKLSFDCPQM-----AAL 1040
Query: 739 QDARCLLDKD--DIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTL 796
++ ++K D+ L+N I+++ +E++ N + D E+ +L++ +
Sbjct: 1041 EEKTREIEKFRLDVSAALANPHTRSIQEVEELVENSRNFNV----DLPEVEDLEHIVRQM 1096
Query: 797 HWCKKALSFLSVSPSLEDVESLMAVAE--GLSTRCFSSMLWNSLI-HGVKWLKRALEVIS 853
W + A +L+D + L+ E GLS + L HG W +A E++S
Sbjct: 1097 KWNEDAGRRRGQYLTLKDCQELILAGEQLGLSEANEHLAHFKDLCRHGEAWEAKAKELMS 1156
Query: 854 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK----- 908
+ +E + A + S P + + + + K + Q+++ +
Sbjct: 1157 V----EAVHYQQLEALSAQANRVPVS-PETLAAVDAILTKQREAQKRIQSLYERSKDPDY 1211
Query: 909 ----CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNS 964
++ LM L+EL +LE+ + + E+W ++ K++ G + N+
Sbjct: 1212 KKRPLYKEVRELMESLEELNSRPT-GAIDLER---EQKRHEDWMRKGKKLFGKA----NA 1263
Query: 965 LLGLLQKIKQSVH-RSLYIYN 984
L +L+ + V R+ Y ++
Sbjct: 1264 PLHILKSHMEYVEKRNFYCFD 1284
Score = 59 (25.8 bits), Expect = 2.4e-29, Sum P(3) = 2.4e-29
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 1194 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1238
K+ E +RI W ++ D L + L+ EGE +P +L
Sbjct: 915 KVQERSRIPEAWGQKLDNILEDDPKPQLKVLHNLLNEGEKIPYHL 959
Score = 52 (23.4 bits), Expect = 4.2e-25, Sum P(2) = 4.2e-25
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 389 SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVL 448
+A K+ +L+ S LP E + L + I+ A +R+ +++ + C E+ L
Sbjct: 1377 AARPKLEDLQEWQSEIPSLPFQPDEEQILERIINQATAFREFLQRYTNTACTTTEEVPTL 1436
Query: 449 --YKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLK 493
Y + E ++ + ET++ + I + + L S+S +
Sbjct: 1437 VFYLRKIEGAEVLLAY-ETNLFRQEIHKWQPVAPEPPPILEQSLSTR 1482
Score = 48 (22.0 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 31/147 (21%), Positives = 63/147 (42%)
Query: 393 KISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLE 452
++ + L + A L + L ++ + +R V ++N P I + +L
Sbjct: 1016 RVENIYALLAEADKLSFDCPQMAALEEKTREIEKFRLDVSAALAN--PHTRSIQEVEELV 1073
Query: 453 SEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGS-MSLKTV-ELLL--QELGDFTVN 508
+ + +D+PE + L ++ Q + + RG ++LK EL+L ++LG N
Sbjct: 1074 ENSRNFNVDLPEVEDLEHIVRQMKWNED--AGRRRGQYLTLKDCQELILAGEQLGLSEAN 1131
Query: 509 MPELELLKQY--HSDAIFWIARLNDIL 533
L K H +A W A+ +++
Sbjct: 1132 -EHLAHFKDLCRHGEA--WEAKAKELM 1155
Score = 46 (21.3 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEG 1180
W ++ +LE KP + + N L EG
Sbjct: 926 WGQKLDNILEDDPKPQLKVLHNLLNEG 952
Score = 43 (20.2 bits), Expect = 6.1e-29, Sum P(3) = 6.1e-29
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 689 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVIN 725
P + +LE L++ S+ L E+ LE++IN
Sbjct: 1374 PRDAARPKLEDLQEWQSEIPSLPFQPDEEQILERIIN 1410
Score = 40 (19.1 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 425 KVWRDSVRKCISNKCP------------AAIEIDVLYKLESEALDLKIDVPETDMLLKMI 472
K+ R V++C CP A +++ L + +SE L E +L ++I
Sbjct: 1350 KIARGKVKECDKYTCPICDWRQKIPRDAARPKLEDLQEWQSEIPSLPFQPDEEQILERII 1409
Query: 473 GQAESCR 479
QA + R
Sbjct: 1410 NQATAFR 1416
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 405 (147.6 bits), Expect = 6.3e-32, Sum P(2) = 6.3e-32
Identities = 96/237 (40%), Positives = 132/237 (55%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+ MR LPDLF+ QPDLL +LVT L+PS L GVPV+ +Q G FV+TFPR+YHAGFN
Sbjct: 440 EAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFN 499
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLC----VVAKSD------- 115
G NCAEAVN AP DWLPHG +LY Q + +SH++LL V K+D
Sbjct: 500 SGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLLR 559
Query: 116 ---LDS-KVSPYLKRE-LLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTC 170
+D+ + + ++ +L K R+ ER R+ + S+ + + + T E C
Sbjct: 560 KNTVDNLRWKAFSAKDGILAKTLKARIDMERTRREFLCNSS-LALKMHSNFDATNERECC 618
Query: 171 IICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVD 227
I C L+LSA CRC P + CL H + LC C + L+R+ + EL L V+
Sbjct: 619 I-CFFDLHLSAAGCRCSPEKYSCLTHVKELCSCPWVTKYFLFRYDIDELNVLVEAVE 674
Score = 40 (19.1 bits), Expect = 6.3e-32, Sum P(2) = 6.3e-32
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 327 DCLHKAENWSSLPGSDSEKVRLD 349
D L N SLP +D + +R D
Sbjct: 868 DSLRDTRNTISLPTNDQKTMRRD 890
Score = 39 (18.8 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 21/89 (23%), Positives = 37/89 (41%)
Query: 415 EKLSQRISSAKVW-RDSVRKCISNKCPAA-IEIDVLYKLESEALDLKIDVPETDMLLKMI 472
E + ++SS W R + +S + +EID K+ + + D+ LK+
Sbjct: 671 EAVEGKLSSVYRWARQDLGLALSTDVSGSKMEIDEEGKVHKDPTPQTTALSGKDLQLKVT 730
Query: 473 GQAESCRARCSEALRGSMSLKTVELLLQE 501
+ S+ L + L V LLL+E
Sbjct: 731 SK------EVSKELEKTSKLSHVNLLLKE 753
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 374 (136.7 bits), Expect = 6.9e-30, Sum P(3) = 6.9e-30
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F +VM++ +P+LF+ QP+LL+ L+TM++P V VP+Y LQ PG +VITFP++YHAG
Sbjct: 794 FEKVMKNLVPELFEKQPNLLYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAG 853
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYL 124
F+ G AEAVNFAP DW+P G + YQ+ H+++V SH++LL +A S +S +L
Sbjct: 854 FSHGFTIAEAVNFAPPDWIPFGSSSIERYQETHRSSVFSHDQLLYTIANRSPSSDLSVWL 913
Query: 125 KRELLRVYTKERMWRERLWRKG---IIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSA 181
+E ++ +KE R +L ++ II+ + +K + + E C +C+ +LS
Sbjct: 914 SKEFQKIKSKENSLRNQLLKRNPTLIIEKS----QKSTQEILNNEPLQCFVCKYDCFLSF 969
Query: 182 VAC 184
+ C
Sbjct: 970 IQC 972
Score = 60 (26.2 bits), Expect = 6.9e-30, Sum P(3) = 6.9e-30
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 193 CLEHWEHLCECKTRKL 208
CL H+E LC+C +KL
Sbjct: 1037 CLSHFEDLCDCNKKKL 1052
Score = 42 (19.8 bits), Expect = 6.9e-30, Sum P(3) = 6.9e-30
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 929 FDCPELEKVLSKVDKVENWKQR 950
F +L+K +S V+K+++ Q+
Sbjct: 1056 FSIEDLDKTISSVNKIQHQHQQ 1077
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 379 (138.5 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 88/239 (36%), Positives = 123/239 (51%)
Query: 2 STFFFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSY 61
+T + MR LPDLF+ QPDLL LVT +PS+L + GV Y V+Q G +V+TFPR+Y
Sbjct: 335 ATALEKAMRKHLPDLFEEQPDLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAY 394
Query: 62 HAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVS 121
HAGFN G NCAEAVN AP DWL HG +LY + + LSH++LL A + K
Sbjct: 395 HAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAV--KAL 452
Query: 122 PYLKRELLRVYTKERMWRERLWRKGIIKS-------------TPMGP-----RKCPEYVG 163
L + T W+ + G + + T +G +K +
Sbjct: 453 WELSASEGKENTTNLRWKSFCGKNGTLTNAIQARLQMEEGRITALGRDSSSLKKMEKDFD 512
Query: 164 TEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
+ + C C L+LSA C+C P + CL+H + LC C + +L R+T+ EL L
Sbjct: 513 SNCERECFSCFYDLHLSASGCKCSPEEYACLKHADDLCSCDVKDGFILLRYTMDELSSL 571
Score = 38 (18.4 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 949 QRCKEIVGTSVGDKNSLLGL 968
Q+C E+V V D ++ LGL
Sbjct: 727 QQCWEMVMRRVKDTSTSLGL 746
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 354 (129.7 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 84/230 (36%), Positives = 121/230 (52%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
+ MR LPDLFD QPDLL +LVT +P++L GVPVY +Q G +V+TFPR+YH+GFN
Sbjct: 340 KAMRKHLPDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFN 399
Query: 67 FGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR 126
G NCAEAVN AP DWL HG ++Y Q + LSH+++L A + S +S + +
Sbjct: 400 CGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAVKS-LSAHGED 458
Query: 127 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCP------EYVGTEED------PTCIICR 174
R K ++ + K I M ++ V ++D CI C
Sbjct: 459 NTKRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKMDKDFDSNCERECISCF 518
Query: 175 QYLYLSAVACR-CRPAA-FVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 222
L+LSA C+ C + C +H +C C+ + + R+T+ EL L
Sbjct: 519 SDLHLSATGCKNCSSLEEYGCTKH--DICSCEGKDRFIFLRYTIDELSSL 566
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 310 (114.2 bits), Expect = 7.1e-23, Sum P(2) = 7.1e-23
Identities = 81/192 (42%), Positives = 104/192 (54%)
Query: 14 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 73
PDL Q DLL+QL TM+NP L + GV VY + Q P FVITFP+S+HAG N G N E
Sbjct: 508 PDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINE 567
Query: 74 AVNFAPADWLPHGGF--GADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRV 131
AVNFAP DWL +G G YQ K VLSH+ L+ +A + S++S EL R
Sbjct: 568 AVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLATNPA-SEISV---SEL-RP 622
Query: 132 YTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAF 191
+ E + RE R I + E + E+ C C+ + Y S VAC C+
Sbjct: 623 WVHEAVKRELGIRIMIRGRYDLKEILYRELMEDAENWQCQHCKAFSYFSQVACSCKSIT- 681
Query: 192 VCLEHWEHLCEC 203
VC H E+LC+C
Sbjct: 682 VCPLHIEYLCKC 693
Score = 43 (20.2 bits), Expect = 7.1e-23, Sum P(2) = 7.1e-23
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 439 CPAAIEIDVLYKLESEALDLKIDVPETDMLL 469
CP IE L ++ L LK+D E LL
Sbjct: 683 CPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 303 (111.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 76/232 (32%), Positives = 112/232 (48%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F M+S + ++ QP V M++P L G+PV +Q PG +VI FP SY++
Sbjct: 365 FKAAMKSFILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSA 424
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYL 124
F+ G NC E NFAP DWLPHG + Q+ K +++S+++LL A+ + L
Sbjct: 425 FDCGFNCLEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGL 484
Query: 125 KRELLRVYTKERMWRERLWRKG----IIKSTPMGPRKCPEY-VGTEE----DPT------ 169
++ YT+ W + G IIKS + E+ + + E D +
Sbjct: 485 SKKNTACYTR---WNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVNK 541
Query: 170 --CIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 219
C +C LYLSAV C C + CL H LC C + LYR+T+ EL
Sbjct: 542 RECCVCLGDLYLSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDEL 593
Score = 37 (18.1 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 1254 ICRKPYDEKAMIACYQCDE 1272
+C P D K+ + Y DE
Sbjct: 574 LCACPCDRKSFLYRYTMDE 592
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 267 (99.0 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 69/174 (39%), Positives = 94/174 (54%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F ++MR S PDLF QPDLL QLVT+++PS LVE+G+P Q FVIT+P YHAG
Sbjct: 400 FEKLMRDSAPDLFKRQPDLLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVYHAG 459
Query: 65 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL-CVVAKSDLDSKVSPY 123
FN G N EAVNFA +WL G + Y+ K V +H ELL ++++ + VS
Sbjct: 460 FNCGFNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAKHDVSLD 519
Query: 124 LKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYL 177
L + L + + E L + KST K P +ED C C+ ++
Sbjct: 520 LVKRSLWSFERYVSRLEELLAQLKDKSTV--EYK-PSVDNNDEDDLCDSCKTHI 570
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 164 (62.8 bits), Expect = 2.1e-18, Sum P(4) = 2.1e-18
Identities = 53/204 (25%), Positives = 92/204 (45%)
Query: 14 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 73
P +P+ L + +L S+L+ NG+ V + +Q FVIT P +Y+ + G + +E
Sbjct: 565 PSFIQEKPETLIKSKILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSE 624
Query: 74 AVNFAPADWLP--HGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKV-SPYLKRELLR 130
+V FA +W+ H ++Y+ H +A S + +L +A + LD V S Y L
Sbjct: 625 SVPFATKEWIQDMHAENSFNMYKNLHISAPFSLDHIL--LANATLDKTVHSAYW----LM 678
Query: 131 VYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAA 190
K+R+ RE R K P+ P + + C C+ + YL+++ +
Sbjct: 679 TCLKDRVDRELTLRNEFRKRHPL-LTWIPTPLESSV-MACAFCKTFAYLASIEEK-NGTK 735
Query: 191 FVCLEHWEHLCECKTRKLHLLYRH 214
CL H + L +L R+
Sbjct: 736 TACLSHKDECFPNTDSDLTVLVRY 759
Score = 118 (46.6 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 42/150 (28%), Positives = 67/150 (44%)
Query: 1166 TKPTIGQIQNYLKEGLLMNISPKDH-YRQKLM----ELNRIGSQWADVAKKVVLDSGALS 1220
++PTI + + L E + P+++ QKL+ E R G + A L+
Sbjct: 1075 SRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTYEWVRRGKRLFGKAN-APLEIFNQH 1133
Query: 1221 LDKVFE-----LIAEGENLPVYLEKELKSLRARS---MLYCICRKPYDEKAMIACYQCDE 1272
L+ V + ++ EG + P ++ E + YC CR+P + MI C C E
Sbjct: 1134 LEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSDPSDFHYCFCRQP-EAGMMIECELCHE 1192
Query: 1273 WYHIDCVKL----LSAPEIYICAACKPQAE 1298
WYH C+K+ L A E +IC C + E
Sbjct: 1193 WYHAKCMKMSKKKLRADEKFICPICDYRVE 1222
Score = 94 (38.1 bits), Expect = 2.1e-18, Sum P(4) = 2.1e-18
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 1253 CICRKPYD-EKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACKPQAEESSTPQNVD 1307
C+CR+P+ + C+ C EW+H +CV L +S Y C C + E P N
Sbjct: 1457 CLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDCCSK-EGKLYPWNTR 1515
Query: 1308 GGRTNAEFL-EPKTPSPKH--TNSRKKLRKAEPGLAQ--KMLAIANNSSVFDCSSGIDNL 1362
T + +L + +PS T + L KA A +L ++N S F S +D +
Sbjct: 1516 PRSTPSVWLSQAYSPSVLQGTTENVAFLNKAFSASANLFDVLPVSNTPSHF---SKMDYV 1572
Query: 1363 WWHNRKP 1369
+RKP
Sbjct: 1573 L-EDRKP 1578
Score = 85 (35.0 bits), Expect = 2.1e-18, Sum P(4) = 2.1e-18
Identities = 49/227 (21%), Positives = 97/227 (42%)
Query: 348 LDCVNELLGFDPLPCNEPGHLILQNYAEEARSL---IQEI----NAALSACSKISELELL 400
L+ E LG D + P +L+ EA ++ +QE+ N +A + + ++
Sbjct: 782 LENYKEALGSDN---SRPSLKVLKTLLNEAETICCPLQEVSLVRNLVKTAQQWLDKFAII 838
Query: 401 YSRASGLPICIVESEKLS-QRISSAKVWRDSVRKCISNKCPAAI-EIDVLYKLESEALDL 458
+ + S +V+ EK +R S+ +S + + + + I E D+L L EA
Sbjct: 839 FKKKS-----MVKKEKRKPKRGSATHSHLESPSEEVEDLNSSNINEADLLINLVEEAEQF 893
Query: 459 KIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQY 518
D PE + + + R + + S+S + +++E + PEL KQY
Sbjct: 894 TFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEEGESLQLKTPELLYFKQY 953
Query: 519 HSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDD 565
+ WI N I + + D + ++EL +++ G + + D+
Sbjct: 954 -MEKTEWIDSFNQI----SQKTD--STMEELVELIERGEKIGLTSDN 993
Score = 82 (33.9 bits), Expect = 2.1e-18, Sum P(4) = 2.1e-18
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1042
C C + ++ + + C C + YH +C++ ++ E +ICP C Y
Sbjct: 1174 CFCRQPEAGMM--IECELCHEWYHAKCMKMSKKKLRADEKFICPICDY 1219
Score = 76 (31.8 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 46/208 (22%), Positives = 83/208 (39%)
Query: 330 HKAENW----SSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEIN 385
HKA+ W GSD+ + L + LL C P LQ SL++ N
Sbjct: 776 HKADTWLENYKEALGSDNSRPSLKVLKTLLNEAETICC-P----LQEV-----SLVR--N 823
Query: 386 AALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI-E 444
+A + + +++ + S + + ++ +R S+ +S + + + + I E
Sbjct: 824 LVKTAQQWLDKFAIIFKKKS----MVKKEKRKPKRGSATHSHLESPSEEVEDLNSSNINE 879
Query: 445 IDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGD 504
D+L L EA D PE + + + R + + S+S + +++E
Sbjct: 880 ADLLINLVEEAEQFTFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEEGES 939
Query: 505 FTVNMPELELLKQYHSDAIFWIARLNDI 532
+ PEL KQY + WI N I
Sbjct: 940 LQLKTPELLYFKQY-MEKTEWIDSFNQI 966
Score = 74 (31.1 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 67/346 (19%), Positives = 144/346 (41%)
Query: 656 VLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLK 715
+L + +V A +WL+N + L S + P+ L+ LK L+++++ + L+
Sbjct: 764 LLAAYSKVVERAHKADTWLENYKEALGSDNS-RPS------LKVLKTLLNEAETICCPLQ 816
Query: 716 EQTELEKVINNCERWQNHASSLLQDARCLLD---KDDIGDGLSNSLVS---KIEQLITSM 769
E + + ++ ++W + + + + + K G + L S ++E L +S
Sbjct: 817 EVSLVRNLVKTAQQWLDKFAIIFKKKSMVKKEKRKPKRGSATHSHLESPSEEVEDLNSSN 876
Query: 770 ESAANCGLSL-------GFDFHEIS-ELQNACSTLHWCKKALSFLSVSPSLEDVESLMAV 821
+ A+ ++L FDF E++ + A S + +KA + S S E+ +++
Sbjct: 877 INEADLLINLVEEAEQFTFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEE 936
Query: 822 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCK-GINFSF 880
E L + + + + +W+ + IS +L VE + G K G+
Sbjct: 937 GESLQLKTPELLYFKQYMEKTEWID-SFNQISQKTDSTMEEL--VELIERGEKIGLTSDN 993
Query: 881 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSK 940
+ L +K + W +QV + + S S + QLK + + LE++
Sbjct: 994 ENMATALLLK-EKSENWMKQVEGLLSQETL--STSKLFQLKSEANSICINRGLLEQLNEV 1050
Query: 941 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKP 986
+ K EN+ + ++ + +++ K + S + NKP
Sbjct: 1051 LQKSENFHTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKP 1096
Score = 71 (30.1 bits), Expect = 8.7e-17, Sum P(5) = 8.7e-17
Identities = 57/309 (18%), Positives = 127/309 (41%)
Query: 498 LLQELGDFTVNMPELEL-LKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEG 556
L++E FT + PE+ + ++ S IF N K++ +E I++EG
Sbjct: 886 LVEEAEQFTFDFPEMAVAFEKAESLKIF--------REKANAMKERSLSYEECLAIVEEG 937
Query: 557 ASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQVT-AEAVILQIEREKL 612
SL+++ +L + ++K + + + D+ M + + + E + L + E +
Sbjct: 938 ESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTME-ELVELIERGEKIGLTSDNENM 996
Query: 613 FIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKS 672
L + + W ++ +L + +++ + + L E NE+ KS
Sbjct: 997 ATALL-LKEKSENWMKQVEGLLSQETLSTSKLFQLKSEANSICINRGLLEQLNEV-LQKS 1054
Query: 673 WLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQN 732
+++L + A P S +E K ++++S+ L +E T +K++ W
Sbjct: 1055 ENFHTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTYEWVR 1114
Query: 733 HASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITS--MESAANCGLSLGFDFHEISELQ 790
L A L+ + N + +EQ T+ ++ ++ +G +++ I+
Sbjct: 1115 RGKRLFGKANAPLE-------IFNQHLEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSD 1167
Query: 791 NACSTLHWC 799
S H+C
Sbjct: 1168 P--SDFHYC 1174
Score = 58 (25.5 bits), Expect = 3.3e-11, Sum P(4) = 3.3e-11
Identities = 29/123 (23%), Positives = 49/123 (39%)
Query: 920 LKELGEAAAFD--CPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVH 977
+K L +AA P +L + E + EI SV D S LG L
Sbjct: 1392 MKSLAQAAISPNPMPSAHDLLPTSNPAELFTNISPEIKELSV-DSTSTLGGLN------- 1443
Query: 978 RSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYIC 1037
S ++ + + SV +C+C + + + C C + +H +C+ + + Y C
Sbjct: 1444 -SSHLVSDQNASV---ICLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYAC 1499
Query: 1038 PYC 1040
P C
Sbjct: 1500 PDC 1502
Score = 46 (21.3 bits), Expect = 8.6e-15, Sum P(4) = 8.6e-15
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 694 LLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 748
L+ L+ + D + F I ++ L++V+ E ++N S + D L +KD
Sbjct: 1232 LIELQKMVDDIPTLPFQPIEIEL---LKRVVKQAEEFKNKMQSEVCDPTQLSEKD 1283
Score = 43 (20.2 bits), Expect = 8.7e-17, Sum P(5) = 8.7e-17
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 290 TLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGI-----RDCLHKAENWSSLPGSDSE 344
TLL EAE E+ VR++V ++W + + + K E GS +
Sbjct: 803 TLLNEAETICCPLQEVSLVRNLVKT---AQQWLDKFAIIFKKKSMVKKEKRKPKRGSATH 859
Query: 345 KVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRA 404
E+ + NE LI N EEA + A K L++ +A
Sbjct: 860 SHLESPSEEVEDLNSSNINEADLLI--NLVEEAEQFTFDFPEMAVAFEKAESLKIFREKA 917
Query: 405 SGL 407
+ +
Sbjct: 918 NAM 920
Score = 41 (19.5 bits), Expect = 5.4e-14, Sum P(4) = 5.4e-14
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 646 IIRASQDIFVVLPSLDEVQNEISTAKSWL 674
++ ++ I L + V+N + TA+ WL
Sbjct: 804 LLNEAETICCPLQEVSLVRNLVKTAQQWL 832
Score = 40 (19.1 bits), Expect = 3.4e-14, Sum P(4) = 3.4e-14
Identities = 12/69 (17%), Positives = 29/69 (42%)
Query: 1166 TKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVF 1225
T T+ ++ ++ G + ++ + + L W + + L LS K+F
Sbjct: 970 TDSTMEELVELIERGEKIGLTSDNENMATALLLKEKSENWMKQVEGL-LSQETLSTSKLF 1028
Query: 1226 ELIAEGENL 1234
+L +E ++
Sbjct: 1029 QLKSEANSI 1037
Score = 40 (19.1 bits), Expect = 6.8e-14, Sum P(4) = 6.8e-14
Identities = 22/123 (17%), Positives = 52/123 (42%)
Query: 358 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 417
+ L P L + Y E+ + + S + EL L R + + ++E +
Sbjct: 938 ESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTMEELVELIERGEKIGLTS-DNENM 996
Query: 418 SQRI---SSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 474
+ + ++ W V +S + + L++L+SEA + I+ + L +++ +
Sbjct: 997 ATALLLKEKSENWMKQVEGLLSQE---TLSTSKLFQLKSEANSICINRGLLEQLNEVLQK 1053
Query: 475 AES 477
+E+
Sbjct: 1054 SEN 1056
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 240 (89.5 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 64/180 (35%), Positives = 97/180 (53%)
Query: 3 TFFFQVMRSSLPDLFDAQPDLLFQLVTMLNP--SVLVENGVPVYSVLQEPGNFVITFPRS 60
T F ++ PDLF QPDLL QLVT+++P ++G+PVY +Q+P ++ITFP+
Sbjct: 456 TKFNDLLNDMSPDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKC 515
Query: 61 YHAGFNFGLNCAEAVNFAPADWLPHGGFGADL-YQQYHKAAVLSHEELLC-VVAKSDLDS 118
YHAGFN G N EAVNF WLP+G FGA Y+ KA V +L+ V+ K + D+
Sbjct: 516 YHAGFNTGYNFNEAVNFTIDFWLPYG-FGAITDYKLTQKACVFDMFDLMINVLDKYNKDT 574
Query: 119 KV--SPYLKR--ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICR 174
+ ++++ L V+ + R R + + ++T + P E D C C+
Sbjct: 575 LLFNDAFVRQCYSSLIVFYNTELKRIRKIQAIVPRTTLLEVHTDPNDEDEEYDIFCSQCK 634
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 166 (63.5 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 61/228 (26%), Positives = 97/228 (42%)
Query: 27 LVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
L +++PS L+ENG ++ P F++ P SYH GF+ G + E+VNFA +W+ G
Sbjct: 507 LPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDG 566
Query: 87 GFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWRERLWRKG 146
+ + + S V+ L SK +P E L ++ + E +
Sbjct: 567 LLNSSI-SVLKSMRIPSSVSYEAVIISMVL-SK-NPCFSSEWLIKCFEDMIANESASKNE 623
Query: 147 IIKSTP-MGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKT 205
I+K P + K V E C C+Q +LS + C P F+CL
Sbjct: 624 IMKLVPNIQALKLESSVPLEI--RCSNCKQPCFLSFMQCH-EPKKFICLGDCVKEVSLNA 680
Query: 206 RKLHLLYR---HTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRP 250
L YR H L+ L + F+++ R LR +S+S +P
Sbjct: 681 TSWMLFYRWDVHELSNLAERFVSLIRGPEEWTNR---LRSVLSTSPKP 725
Score = 117 (46.2 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 1239 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK 1294
E L + + ++C CR P + MI C C EWYH C+K+ L E + C C
Sbjct: 1085 EGRLTIRKKKGCIFCFCRLP-ESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICD 1143
Query: 1295 PQAEE---SSTPQNVDGGRTNAEFLEPKT-P-SPKHTNSRKKLRKAEPGLAQKMLAIANN 1349
+ E S+ P+ D + + + K P PK T + +K+ Q+M A+A+N
Sbjct: 1144 YRVEIPRLSNRPKLED---LQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHN 1200
Score = 83 (34.3 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 995 CMCCESDSKELEFLI-CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGG 1053
C+ C E +I C C + YH +CL+ ++ E + CP C Y + +
Sbjct: 1096 CIFCFCRLPESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDY--RVEIPRLSN 1153
Query: 1054 SPLRFGGKRSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVA 1095
P K DL+ L + D + + + L++VVD+A
Sbjct: 1154 RP-----KLEDLQSLYK---DVKLLPFQPKETETLRKVVDLA 1187
Score = 72 (30.4 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 20/89 (22%), Positives = 37/89 (41%)
Query: 956 GTSVGDKN----SLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1011
GT++ D N S + L++ K + + + + S C+C E S F+ C+
Sbjct: 1317 GTNISDANNKNESHVSLMKNWKLGSPAFVTLVKEKNSS-----CLCGEEFSPRDSFIDCT 1371
Query: 1012 ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
C+ +H C+ + + CP C
Sbjct: 1372 ICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
Score = 69 (29.3 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 24/98 (24%), Positives = 40/98 (40%)
Query: 1253 CICRKPYDEK-AMIACYQCDEWYHIDCVKLLS--APEI--YICAACKPQA---------- 1297
C+C + + + + I C C+ +H DCV L + A + + C C Q+
Sbjct: 1355 CLCGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPICMEQSGGIYPWQLRP 1414
Query: 1298 EESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKA 1335
P ++ G E +PK S +T + K KA
Sbjct: 1415 RNGMHPDHISGFSKEVE-TDPKLGSSGYTLNNSKFDKA 1451
Score = 66 (28.3 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 77/379 (20%), Positives = 148/379 (39%)
Query: 626 WEERAADILIH--KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLK--NSELFL 681
W R +L K Q+ + ++ ++ + P +++ + A SW+ N L +
Sbjct: 711 WTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKV 770
Query: 682 ASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA 741
AS L + + S K + K + C+ +N + Q A
Sbjct: 771 ASLKRKKDKKPPLFKAHDHWNNTSNLKDSAVLFKVLQTSRSMAFTCQEIEN----MKQKA 826
Query: 742 RCLLD-KDDIGDGLSNSL-VSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWC 799
LL+ ++ + + S L + ++L+T E LGF E+ +Q W
Sbjct: 827 FDLLEFRNRLINSFSGPLDKNTCQRLLTEAEL-------LGFTIPELGIIQKYLIQFEWL 879
Query: 800 KKALSFLSVSPSLEDVESLMA--VAEGLSTRCFSSMLWNSLIHGVK--WLKRALEVISAP 855
SF + + D+E L+ V+ G+ M++ + G W + + +S
Sbjct: 880 DMFYSFETTRTTDSDLERLITYGVSAGIPEDN-DYMIFAKAMKGRAEIWENQVYDTLSKS 938
Query: 856 CKFKRCKLSDV-EEVLAGCKGINFSFPVVIGELTSAIQ-KHKLWQEQVHQFFNLKCAQQS 913
KLS + +E + C F V+G L +A + K+K+ + ++
Sbjct: 939 -NISYDKLSLLRDEAMNLCVNKEL-FSKVVGILNNAEEIKNKI------ATLCERSQEKD 990
Query: 914 WSLMLQLKELGEA--AAFDCPELEK---VLSKV-DKVENWKQRCKEIVGTSVGDKNSLLG 967
++L + E+ EA +A P L + L K+ D V W +R K + G + L
Sbjct: 991 FALRPSIDEVKEALASAEKLPILSESTVTLQKMYDVVLEWIRRGKRLFGKANAPLEILGQ 1050
Query: 968 LLQKIKQSVHRSLYIYNKP 986
L +++ SL + ++P
Sbjct: 1051 HLDYVEKRNSASLSLNDRP 1069
Score = 57 (25.1 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 548 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDT----KMPLDFIRQVTAEAV 603
+L ++ G S I D+ ++ + K + DT + D + + EA+
Sbjct: 894 DLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAM 953
Query: 604 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEV 663
L + +E LF + G+L A EE I A +CE R+ + F + PS+DEV
Sbjct: 954 NLCVNKE-LFSKVVGILNNA---EEIKNKI----ATLCE-----RSQEKDFALRPSIDEV 1000
Query: 664 QNEISTAK 671
+ +++A+
Sbjct: 1001 KEALASAE 1008
Score = 56 (24.8 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 42/210 (20%), Positives = 84/210 (40%)
Query: 447 VLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFT 506
VL+K+ + + E + + + R R + G + T + LL E
Sbjct: 801 VLFKVLQTSRSMAFTCQEIENMKQKAFDLLEFRNRLINSFSGPLDKNTCQRLLTEAELLG 860
Query: 507 VNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDL 566
+PEL ++++Y W+ D+ + + + ++ L + G S I D+
Sbjct: 861 FTIPELGIIQKYLIQ-FEWL----DMFYSFETTRTTDSDLERL---ITYGVSAGIPEDND 912
Query: 567 PLVEVELKKAHCREKALKACDT----KMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAA 622
++ + K + DT + D + + EA+ L + +E LF + G+L
Sbjct: 913 YMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAMNLCVNKE-LFSKVVGILNN 971
Query: 623 AMRWEERAADILIHKAQMCEFEDIIRASQD 652
A + + A L ++Q +F +R S D
Sbjct: 972 AEEIKNKIAT-LCERSQEKDFA--LRPSID 998
Score = 52 (23.4 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 370 LQNYAEEARSLIQ-------EINAALSACSK--ISELELLYSRASGLPICIVESEKLSQR 420
L N AE SLI+ + + LS K + L+ L A + E+ L
Sbjct: 694 LSNLAERFVSLIRGPEEWTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDF 753
Query: 421 ISSAKVWRDSVRKC--ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESC 478
+ +A W DSV +C +++ + L+K + ++ ++ +L K++ + S
Sbjct: 754 VQNANSWIDSVNECLKVASLKRKKDKKPPLFKAHDHWNNTS-NLKDSAVLFKVLQTSRSM 812
Query: 479 RARCSEALRGSMSLKTVELL 498
C E +M K +LL
Sbjct: 813 AFTCQEI--ENMKQKAFDLL 830
Score = 51 (23.0 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 737
+LE L+ L K L KE L KV++ +++ +L
Sbjct: 1156 KLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQAL 1197
Score = 50 (22.7 bits), Expect = 4.8e-14, Sum P(5) = 4.8e-14
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 492 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL--VNINGRKDQ 542
LK ++ LL + + PE L+ + +A WI +N+ L ++ +KD+
Sbjct: 727 LKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKVASLKRKKDK 779
Score = 50 (22.7 bits), Expect = 8.6e-13, Sum P(4) = 8.6e-13
Identities = 45/208 (21%), Positives = 85/208 (40%)
Query: 432 RKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS 491
R + N ++ + +L +EA L +PE ++ K + Q E + +
Sbjct: 833 RNRLINSFSGPLDKNTCQRLLTEAELLGFTIPELGIIQKYLIQFEWL-----DMFYSFET 887
Query: 492 LKTVELLLQELGDFTVN--MPE----LELLKQYHSDAIFWIARLNDILVNINGRKDQHNV 545
+T + L+ L + V+ +PE + K A W ++ D L N D+ ++
Sbjct: 888 TRTTDSDLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSL 947
Query: 546 I-DE-LN-CILKEGASLRIQVDDLPLVEVELKKAH-CREKALKACDTKMPLDFIRQVTAE 601
+ DE +N C+ KE S + + + E++ K A C K + +D +++ A
Sbjct: 948 LRDEAMNLCVNKELFSKVVGILN-NAEEIKNKIATLCERSQEKDFALRPSIDEVKEALAS 1006
Query: 602 AVILQIEREKLFIDLSGVLAAAMRWEER 629
A L I E + L + + W R
Sbjct: 1007 AEKLPILSEST-VTLQKMYDVVLEWIRR 1033
Score = 50 (22.7 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 388 LSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNK---CPAAIE 444
LS K+ +L+ LY LP E+E L + + A +R ++ N A +
Sbjct: 1151 LSNRPKLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHNPFGLTMAEVP 1210
Query: 445 IDVLYKLESEALDLKIDVPETDM 467
+ Y + E ++ + V ET++
Sbjct: 1211 LARFYLRKMEGAEILL-VDETNL 1232
Score = 45 (20.9 bits), Expect = 6.7e-09, Sum P(5) = 6.7e-09
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1220 SLDKVFELIAEGENLPVYLE 1239
S+D+V E +A E LP+ E
Sbjct: 996 SIDEVKEALASAEKLPILSE 1015
Score = 40 (19.1 bits), Expect = 6.7e-09, Sum P(5) = 6.7e-09
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 1162 LEGLTKPTIGQIQNYL 1177
L G T P +G IQ YL
Sbjct: 858 LLGFTIPELGIIQKYL 873
Score = 39 (18.8 bits), Expect = 6.4e-10, Sum P(5) = 6.4e-10
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 1154 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKD-HYRQKLMEL 1198
+RV + +L +P + +Q+ K+ L+ PK+ +K+++L
Sbjct: 1144 YRVEIPRLSN---RPKLEDLQSLYKDVKLLPFQPKETETLRKVVDL 1186
Score = 37 (18.1 bits), Expect = 9.9e-10, Sum P(5) = 9.9e-10
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 806 LSVSPSLEDVESL 818
LS P LED++SL
Sbjct: 1151 LSNRPKLEDLQSL 1163
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 130 (50.8 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 1252 YCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI--YICAAC 1293
YC+CR+ Y+ M+ C +C+EWYH+ CVK +S P+ YIC C
Sbjct: 1384 YCVCRE-YEYGTMVECDKCNEWYHVQCVKDVSNPDADKYICPTC 1426
Score = 114 (45.2 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 83
M+ P +L G+ + +QEPG +I FP+++ + +FG N +E VN A WL
Sbjct: 752 MITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWL 805
Score = 97 (39.2 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 48/199 (24%), Positives = 83/199 (41%)
Query: 995 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SESVSQFGG 1053
C+C E + + + C C + YH+QC++ +V A+ YICP C S + +QF
Sbjct: 1385 CVCREYEYGTM--VECDKCNEWYHVQCVK--DVSNPDADKYICPTCLVISMSSNYNQFLQ 1440
Query: 1054 SPLRFGGKRSDLRMLIELLSDSEFF-CRGIEAKDVLQEVVDVALECKTCLTDIVKFESCY 1112
+ G +L+ E+ + E + I ++++++D + L D +
Sbjct: 1441 DQITLG----ELK---EIYAHGELLNAQSINEMIIMKDLIDELTKHHIGLQD--QIARVV 1491
Query: 1113 LDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPT--I 1170
L D+ + L L+ GV N D L NL R K+LE K + I
Sbjct: 1492 LQSDITTKLDCLRFILRKLYGNGVL---LNDIWDHVL--NLIR-EYEKILEDAKKLSSEI 1545
Query: 1171 GQIQNYLKEGLLMNISPKD 1189
I+N + ++ KD
Sbjct: 1546 KPIENVPTTDNVEQVTQKD 1564
Score = 74 (31.1 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 73/380 (19%), Positives = 152/380 (40%)
Query: 631 ADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVA 688
+DIL+ +K + + E I + V +D Q + K ++N F+ ++ A
Sbjct: 979 SDILLKTYKGILSDGEKIYSSIVSSAVKQQDID--QEKFKKFKDQVENLRSFIDNSNAFV 1036
Query: 689 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 748
+LL ++ + + + + + T+L K++++ + S + Q L K+
Sbjct: 1037 EKCQNLLSIKHQQRIRNGNDVFREKFYSYTDLLKLVDSIPQLNFMCSEIEQ---ILEFKN 1093
Query: 749 DIG--DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKK-ALSF 805
+I D S L+SK + I + + G S G D ++ + L W + +L
Sbjct: 1094 EIENFDKASRLLLSKKNKSIQEFDDLISLGESFGLDIPSLNFIIRIRDRLKWLRTYSLIE 1153
Query: 806 LSVSP--SLEDVESLMAVA----EGLSTRCFSSMLWNSLIHGVKWLKRALE-VISAPCKF 858
V P +V S++ + +G+S + + + A + +S K+
Sbjct: 1154 KGVDPYGDKNEVFSIVDLRKFLDQGISVLSTDDLPMIKEVEAILNASNAFDHEVSKFLKY 1213
Query: 859 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQ--EQVHQFFNLKCAQQSWSL 916
+ D+ + G FS + + + ++ KL + + QF L+ A
Sbjct: 1214 NYVQELDLNRL--GDIAKRFSTEKLFISMNNYLELSKLHINIKLIEQFKELESASYPELK 1271
Query: 917 MLQLKELGEAAAFDCPELEKVLSKVDK-VEN-WKQRCKEIVGTSVGDKNSLLGLLQKIK- 973
L L F+ L K L+ V+ +++ W + C V T++ + + L K+
Sbjct: 1272 QLHNSVLESGLKFESEVLSKKLASVESWIDSSWNKLCTTKVITTLNKRIDVDHLNSKLTI 1331
Query: 974 --QSVHRSLYIYNKPHGSVS 991
+ V + L++ K S+S
Sbjct: 1332 NAKLVEKLLHLLYKSEFSLS 1351
Score = 58 (25.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 370 LQNYAEEAR-----SLIQEINAALSACSKISELELLYSRA--SGLPICIVESEKLSQRIS 422
+ NY E ++ LI++ SA EL+ L++ SGL ESE LS++++
Sbjct: 1240 MNNYLELSKLHINIKLIEQFKELESA--SYPELKQLHNSVLESGLKF---ESEVLSKKLA 1294
Query: 423 SAKVWRDSV-RKCISNKCPAAIE--IDVLYKLESEALDLKIDVPETDMLLKMIGQAE 476
S + W DS K + K + IDV + L S+ L I+ + LL ++ ++E
Sbjct: 1295 SVESWIDSSWNKLCTTKVITTLNKRIDVDH-LNSK---LTINAKLVEKLLHLLYKSE 1347
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 172 ICRQYLYLSAVAC-RC 186
+CR+Y Y + V C +C
Sbjct: 1386 VCREYEYGTMVECDKC 1401
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 703 LVSQSKFLKISLKEQTELEKVI 724
++S KF++ +EQ E + I
Sbjct: 913 IISMQKFIQCQQQEQEEQQNSI 934
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 200 (75.5 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 7 QVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFN 66
++ R PD+ L V +++P+VL ENG+P + QE G F++TFP YHAGFN
Sbjct: 222 RLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFN 281
Query: 67 FGLNCAEAVNFAPADWLPHG 86
G NCAEA+NFA W+ +G
Sbjct: 282 HGFNCAEAINFATPRWIDYG 301
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 193 (73.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 243 VALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 43 (20.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 274 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLI 316
CS + FS DA+ +L+ LW + AV D ++
Sbjct: 307 CSCGEARVSFSMDAFVRILQPERYELWKRGQDQAVVDHTETMV 349
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 194 (73.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 246 VALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 304
Score = 44 (20.5 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1310 RTNAEFLEPKTPSPKHTNSRKKL---RKAEPGLAQ 1341
R + +EP+ P+ + +++K++ R+A GL Q
Sbjct: 342 RAVVDHMEPRVPASQELSTQKEVQLPRRAALGLRQ 376
Score = 40 (19.1 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 274 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRD 310
CS + FS DA+ +L+ LW + AV D
Sbjct: 310 CSCGEARVTFSMDAFVRILQPERYDLWKRGQDRAVVD 346
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 193 (73.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 243 VALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 274 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRD 310
CS + FS DA+ +L+ +W + AV D
Sbjct: 307 CSCGEARVSFSMDAFVRILQPERYEMWKRGQDQAVVD 343
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 172 (65.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 24 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 83
L + T+++P V V+ G+P ++Q PG FV+TFP +YH+GF+ G N EA N A +WL
Sbjct: 299 LGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWL 358
Query: 84 PHGGFGADLYQQYHKAAVLSHEELLC--VVAK-SDLDSKVSPYLKRELLRVYTKERMWRE 140
A + ++SH +LL V+A S + + ++P K R+ K R E
Sbjct: 359 RMAKDAAIRRAAINYPPMVSHLQLLYDFVLALGSRVPTSINP--KPRSSRLKDKARSEGE 416
Query: 141 RLWRKGIIKS 150
RL +K +++
Sbjct: 417 RLTKKLFVQN 426
Score = 64 (27.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 701 KDLVSQSKFLKIS--LKEQTEL-EKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNS 757
+DL S S + +S LK+ + EK + CER +NH +S +D + L D +++
Sbjct: 478 EDLSSDSVVVDLSNGLKDTVSVKEKFTSLCERSRNHLASTEKDTQETLS--DAERRKNDA 535
Query: 758 LVSKIEQLITSMESAANCGLSLGFDFHEISELQNACS 794
V+ +Q + S CG+ L FD I + + A +
Sbjct: 536 AVALSDQRLFS---CVTCGV-LSFDCVAIVQPKEAAA 568
Score = 41 (19.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 375 EEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC 434
++ARS + + L + I ELL S G P+ ++ S IS R
Sbjct: 409 DKARSEGERLTKKLFVQNIIHNNELLSSLGKGSPVALLPQS--SSDISVCSDLRIGSHLI 466
Query: 435 ISNKCPAAIEIDVLYKLESEALDLKIDVPET 465
+ + P ++ + L +S +DL + +T
Sbjct: 467 TNQENPIQLKCEDLSS-DSVVVDLSNGLKDT 496
Score = 38 (18.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 241 RRQISSSNRPTTLTKKVKGVRVTMSQLVEQWLS 273
+RQ S+ + TK V+ R T + ++++ S
Sbjct: 1135 KRQTRSTAKRIAKTKTVQSSRDTKGRFLQEFAS 1167
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 183 (69.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 49 (22.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 560 RIQVDDLPLVEVELKKAHCREKALK 584
+I VD +PL ++LK CR + K
Sbjct: 793 QIDVDRIPLQRLKLKCIFCRHRVKK 817
Score = 41 (19.5 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 554 KEGASLRIQVDDLPLVEVELKKAHCREKALKA 585
KE RIQVD L + +L C ++ A
Sbjct: 430 KEALDTRIQVDQSLLNDTKLSGKGCISSSVTA 461
Score = 38 (18.4 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 657 LPSLDEVQNEISTAKSWLK 675
LP + + E+ +SW K
Sbjct: 595 LPEVLSIDEEVEETESWAK 613
Score = 37 (18.1 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1248 RSMLYCI-CRKPYDEKAMIACYQCDEW-----YHIDC 1278
R L CI CR +K AC QC +H+ C
Sbjct: 803 RLKLKCIFCRHRV-KKVSGACIQCSYGRCPASFHVTC 838
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 193 (73.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/127 (37%), Positives = 72/127 (56%)
Query: 24 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 83
L + T+++P ++V +G+P ++Q PG FV+TFPRSYH GF+ G NC EA NF WL
Sbjct: 358 LGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWL 417
Query: 84 PHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMW-RERL 142
A + +LSH++LL ++ S + S+V P R LL R+ R+R
Sbjct: 418 NVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFV-SRV-P---RSLLPGGRSSRLRDRQRE 472
Query: 143 WRKGIIK 149
R+ ++K
Sbjct: 473 EREFLVK 479
Score = 41 (19.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 1310 RTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIAN 1348
+T++ ++ P+ +HT ++L ++ GL K L I +
Sbjct: 640 KTSSRYIRPRIFCLEHTIELQRLLQSRGGL--KFLVICH 676
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 183 (69.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 48 (22.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 560 RIQVDDLPLVEVELKKAHCREK 581
+I VD +PL ++LK CR++
Sbjct: 792 QIDVDRIPLQRLKLKCIFCRQR 813
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 660 LDEVQNEISTAKSWLKNSELFLASAFAVAPASCS-LLRLES--LKDLVSQSKFLKISLKE 716
+DE+Q E TA + S L AS + P S + ES LK L +S + SL E
Sbjct: 459 IDEIQPENDTANAVTSPSTLKKASD--LIPFSHGHITGKESRLLKILQLESPKIPSSLAE 516
Query: 717 QTE-LEKVINNCERWQNHASSL 737
L + N E + HAS+L
Sbjct: 517 SNRVLTEGEENDE--EGHASNL 536
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 170 CIICRQYLYLSAVAC------RCRPAAF 191
CI CRQ + + AC RC PA+F
Sbjct: 807 CIFCRQRVKRVSGACIQCSYGRC-PASF 833
Score = 38 (18.4 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 657 LPSLDEVQNEISTAKSWLK 675
LP + + E+ +SW K
Sbjct: 594 LPEVLSIDEEVEETESWAK 612
Score = 37 (18.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 1320 TPSPKH-TNSRKKLRKAEPGL 1339
TP K RKKLRKA L
Sbjct: 353 TPEVKTWLQRRKKLRKAPKSL 373
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 554 KEGASLRIQVDDLPLVEVELKKAHC 578
KE + RIQVD + +L C
Sbjct: 429 KEASDTRIQVDQSLTNDTKLSGKSC 453
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 176 (67.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGG 87
+T+++PS+L + +P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 323 MTLISPSILKKYSIPFDRITQEEGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGK 382
Query: 88 FGA 90
A
Sbjct: 383 MAA 385
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 183 (69.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 63 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 121
Score = 40 (19.1 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 657 LPSLDEVQNEISTAKSWLK 675
LP + ++ E+ +SW K
Sbjct: 416 LPEVLSIEEEVEETESWAK 434
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 183 (69.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 13/52 (25%), Positives = 19/52 (36%)
Query: 1290 CAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQ 1341
CA P + G T+ E PK P PK S + ++ L +
Sbjct: 477 CATVPPSNPRADYASMSSGHVTSEESDPPKLPWPKSPESYSSVAESTSALTE 528
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1270 CDEWYHIDCVKLLSA--PEIYICAACK 1294
C + H C+ ++ +IY+CA CK
Sbjct: 723 CCQRLHEKCMCFVNEFICKIYVCAPCK 749
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 186 (70.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PS+L + G+P V QE G F+ITFP SYHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG 300
Score = 44 (20.5 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 999 ESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1040
E D + + C C+ C H C + D+ E ++C C
Sbjct: 724 EEDGTSV-LITCRNCQVCVHASCYGVSP-DKA-TEDWMCSRC 762
Score = 40 (19.1 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 554 KEGASLRIQVDDLPLVEVELKK 575
++G+ L ++ DD+ +E EL K
Sbjct: 988 EDGSQLMVKRDDVYTLEEELPK 1009
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 561 IQVDDLPLVEVELKKAHC--REKALKAC 586
+ V +PL LK C R K + C
Sbjct: 812 VDVSKIPLQRFRLKCIFCKKRRKRIAGC 839
Score = 37 (18.1 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1271 DEWYHIDC-VKLLSAPEIYI 1289
D+W H+ C V +L A + I
Sbjct: 787 DKWVHVMCAVGVLEAKFVNI 806
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 183 (69.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 63 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 121
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 657 LPSLDEVQNEISTAKSWLK 675
LP + ++ E+ +SW K
Sbjct: 342 LPEVLSIEEEVEETESWAK 360
Score = 39 (18.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 560 RIQVDDLPLVEVELKKAHCREK 581
+I V +PL ++LK CR +
Sbjct: 540 QIDVGRIPLQRLKLKCIFCRHR 561
Score = 37 (18.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 926 AAAFDCPELEKVLSKVDKVENW 947
A + + PE+ + +V++ E+W
Sbjct: 337 AESNELPEVLSIEEEVEETESW 358
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 183 (69.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 657 LPSLDEVQNEISTAKSWLK 675
LP + ++ E+ +SW K
Sbjct: 594 LPEVPSIEEEVEETESWAK 612
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 560 RIQVDDLPLVEVELKKAHCREKALK 584
+I V +PL ++LK CR + K
Sbjct: 792 QIDVGRIPLQRLKLKCIFCRHRVKK 816
Score = 38 (18.4 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 663 VQNEISTAKSW 673
++ E TAKSW
Sbjct: 558 IEGETKTAKSW 568
Score = 38 (18.4 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 930 DCPELEKVLSKVDKVENW 947
+ PE+ + +V++ E+W
Sbjct: 593 ELPEVPSIEEEVEETESW 610
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1248 RSMLYCI-CRKPYDEKAMIACYQCDEW-----YHIDC 1278
R L CI CR +K AC QC +H+ C
Sbjct: 802 RLKLKCIFCRHRV-KKVSGACIQCSYGRCPASFHVTC 837
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 183 (69.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F++ M+ P+ P+ L + + +P +L ENG+ ++ G F+IT+P YHAG
Sbjct: 266 FYKFMQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAG 325
Query: 65 FNFGLNCAEAVNFAPADWLPHG 86
FN+G N AE+VNFA +WLP G
Sbjct: 326 FNYGYNLAESVNFALEEWLPIG 347
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1296 QAEESSTPQNVDGGRTN-----AEFLEPKTPSPK---HTNSRKKLRKAEP 1337
Q STP V T+ ++ + KTP P+ H + + L+K P
Sbjct: 604 QQHSFSTPSTVSNLSTSVLGPLSDTNDIKTPHPERPNHKTANRILKKESP 653
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 180 (68.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PS+L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 44 (20.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 569 VEVELKKAHCREKALKACDTKMPLDFIRQVTA-EAVILQIEREKLFIDLSGVLAA-AMRW 626
+++E+KK+ R L T+ PL ++Q T+ + E+ D + + +++W
Sbjct: 608 MKMEIKKS--RRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDPEALKSLLSLQW 665
Query: 627 EERA 630
+ RA
Sbjct: 666 KNRA 669
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 183 (69.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 657 LPSLDEVQNEISTAKSWLK 675
LP + ++ E+ +SW K
Sbjct: 597 LPEVLSIEEEVEETESWAK 615
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 560 RIQVDDLPLVEVELKKAHCREK 581
+I V +PL ++LK CR +
Sbjct: 795 QIDVGRIPLQRLKLKCIFCRHR 816
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 182 (69.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PS+L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 188 MTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWIDYG 246
Score = 39 (18.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 561 IQVDDLPLVEVELKKAHCREKALKACD 587
++ D L+ + + AH K K C+
Sbjct: 791 VRPTDCLLITITITHAHTPNKRTKTCE 817
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 169 (64.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 60/210 (28%), Positives = 97/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL GV V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 978 MISPEVLCREGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1037
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1038 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1097
Query: 147 IIKST-----------PMGPRKCPEYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ S P G +K +++ E + C +C+ YLS V F CL
Sbjct: 1098 LHSSARYGSHDGGSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1156
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1157 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1186
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 168 (64.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 59/210 (28%), Positives = 97/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 996 MISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1055
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1056 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1115
Query: 147 IIKST-----------PMGPRKCPEYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ S P G +K +++ E + C +C+ YLS V F CL
Sbjct: 1116 LHSSARYGSHDGSSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1174
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1175 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1204
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 123 (48.4 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 1242 LKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL--LSAPE----IYICAACKP 1295
L+S R YC CR+ + AM+ C C EWYH+DC+ L P+ +++C+ C P
Sbjct: 1230 LESCSKRQTKYCFCRRVEEGTAMVECEICKEWYHVDCISNGELVPPDDPNVLFVCSICTP 1289
Score = 107 (42.7 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 19 AQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 78
+Q D +F+ P+ ++ NG+ +Y QE G+++ FP+++ G ++ FA
Sbjct: 626 SQSDFIFE------PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFA 679
Query: 79 PADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLK---RELLRVYTKE 135
P+ WL F ++ + K L ++ ++ + L+S +P L+ R+L+ Y E
Sbjct: 680 PSSWLR---FSSEAAKWTSKMGFLPGLDVNQLLINALLNSN-NPVLRKKCRDLISNYVVE 735
Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 701 KDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVS 760
+D+ + K+ LK Q ++KV ++ SL LLD ++ + +S S
Sbjct: 1059 EDIDKLGEVRKLILKYQDMMQKVRVFLKKDPPSKISLSDLEDVLLDIEEYRLPIQSSFFS 1118
Query: 761 KIEQLITSMESA 772
+++ +I +E+A
Sbjct: 1119 ELDYVIREIENA 1130
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 167 (63.8 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 61/210 (29%), Positives = 97/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G N +E V+FA W G
Sbjct: 982 MISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFET 1041
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ H A S E+LL +A+++ + P L LL + E R L+ G
Sbjct: 1042 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAG 1101
Query: 147 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ S G +K P +++ E + C IC+ YLS V F CL
Sbjct: 1102 LHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1160
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1161 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1190
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 160 (61.4 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+TM++P VL ++ +P + QE G +ITFP YHAGFN G N AE+ NFA W+ +G
Sbjct: 249 MTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYG 307
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 165 (63.1 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 60/210 (28%), Positives = 98/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 984 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1043
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1044 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1103
Query: 147 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ S G +K P +++ E + C IC+ YLS V F CL
Sbjct: 1104 LHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1162
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1163 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1192
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 173 (66.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L ++ VPV + QE G +ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 240 MTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYG 298
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 485 ALRGSMSLKTVELLLQELGDFTVNMPELELLKQ 517
+L+ +LKT + LL+ + D T + E E K+
Sbjct: 430 SLQSPANLKTKQELLEYIDDGTEDDDEEEDFKR 462
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 164 (62.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/210 (28%), Positives = 98/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 987 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1046
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1047 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1106
Query: 147 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ S G +K P +++ E + C +C+ YLS V F CL
Sbjct: 1107 LHSSARYGSHDSNGAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1165
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1166 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1195
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 164 (62.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/210 (28%), Positives = 98/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 997 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1056
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1057 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1116
Query: 147 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ S G +K P +++ E + C +C+ YLS V F CL
Sbjct: 1117 LHSSARYGSHDSNGAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1175
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1176 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1205
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 175 (66.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 40 (19.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1038 PYCQYFESES---VSQFG-GSPLRFGGK-RSDLRMLI 1069
PYCQ ++E ++ G G P K R R LI
Sbjct: 692 PYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLI 728
Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 99 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERM 137
A + L V+ + +D P + +L VY ++RM
Sbjct: 821 AIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRM 859
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 175 (66.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 40 (19.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1038 PYCQYFESES---VSQFG-GSPLRFGGK-RSDLRMLI 1069
PYCQ ++E ++ G G P K R R LI
Sbjct: 726 PYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLI 762
Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 99 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERM 137
A + L V+ + +D P + +L VY ++RM
Sbjct: 855 AIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRM 893
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 181 (68.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 14 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 73
P+ F + L +T+++PSVL + +P + QE G F+ITFP YHAGFN G NCAE
Sbjct: 230 PNSFKSCEAFLRHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAE 289
Query: 74 AVNFAPADWLPHG 86
+ NFA W+ +G
Sbjct: 290 STNFASIRWIDYG 302
Score = 47 (21.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 423 SAKVWRDSVRKCISNKCPAAIEIDVLYKLES-EALDLKIDVPETD 466
+AK WR +RK + P+A++ E E + D PET+
Sbjct: 1002 TAKSWRHPLRKPTARAVPSAVKQQAASDDEVIEECASEEDEPETE 1046
Score = 43 (20.2 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 659 SLDEVQNEISTA---KSWLKNSELFLASAFAVAPASCS--LLRLES--LKDLVSQSKFLK 711
SLD ST +SWL+ S AP SCS L ++S +K +S+
Sbjct: 342 SLDHTLPTPSTTPELQSWLQRRRRKTPSTSLHAPRSCSKRLKTVDSAPVKGSGRRSRSAA 401
Query: 712 ISLKEQTELEK 722
++ K + E E+
Sbjct: 402 LTAKNKEEEEE 412
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 1251 LYCICRKPYDEKAMI--ACYQCDEWYHIDCVKLLSAP 1285
+YC R A I +C +C +H+ C P
Sbjct: 1241 IYCRNRIKRLSGACIQCSCGRCPTSFHVTCAHAAGVP 1277
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 995 CMCCESDSKELEFLI----CSACKDCYHLQC 1021
C+ C + K L C C +H+ C
Sbjct: 1240 CIYCRNRIKRLSGACIQCSCGRCPTSFHVTC 1270
Score = 37 (18.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 419 QRISSAKVWRDSVRKCISNKCP 440
++ S V D VR C CP
Sbjct: 678 EKSHSPPVITDEVRGCSERVCP 699
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 174 (66.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1271 DEWYHIDC-VKLLSA 1284
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 183 (69.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PS+L + G+P V QE G F++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 245 MTLISPSILRKYGIPFEKVTQEAGQFIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYG 303
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 1294 KPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKA 1335
K +AE + ++ + T+ + + SPK +K+LR +
Sbjct: 416 KAEAEVEKSVRDEEPSSTSEQI---SSSSPKQNTGQKRLRSS 454
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 638 AQMCEF-EDIIRASQDIFV 655
A +C +D+++ S D+FV
Sbjct: 306 ATLCSCRKDMVKISMDVFV 324
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 647 IRASQDIFVVLPSLDEVQNEIS 668
+ + Q+ ++ +D+VQ+E S
Sbjct: 1053 VSSEQETSIISAQVDDVQSEYS 1074
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 159 (61.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVEN-GVPVYSVLQEPGNFVITFPRSYHA 63
F Q M+S P L +++PS+L G+ V ++ G FVIT+P YH+
Sbjct: 420 FEQAMKSIWPSDAKTCDQFLRHKTYLVSPSLLKSQYGITVNKMVHYEGEFVITYPYGYHS 479
Query: 64 GFNFGLNCAEAVNFAPADWLPHG 86
G+N G NCAE+VNFA WL +G
Sbjct: 480 GYNLGYNCAESVNFATEKWLDYG 502
Score = 58 (25.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 531 DILVNINGRKDQHN---VIDELNCILKEGASLRI--QVDDLPLVEVELKKAHCRE 580
D+L +G+ H + E IL++G+ + +D +P + LK +CRE
Sbjct: 604 DLLPTEDGKSHAHRRCALYTEETSILRDGSGKEVVCDIDKIPKARMGLKCLYCRE 658
Score = 46 (21.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 1305 NVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGL--AQKMLA 1345
++DG ++ L P P+ T++R + RK + + A++M A
Sbjct: 541 DLDGYEAASDLLTPPRSVPEKTSNRGRKRKHDGDMNKAKRMRA 583
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 1008 LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFG 1052
L C C + + L PTE ++HA C Y E S+ + G
Sbjct: 591 LPCLLCPNDLDYEDLLPTEDGKSHAHRR-CAL--YTEETSILRDG 632
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 175 (66.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 39 (18.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 99 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWR 139
A + L V+ ++ +D P + +L +Y ++RM R
Sbjct: 809 AIAVPEVRFLNVIERNPVDVSAIPEQRWKLKCIYCRKRMKR 849
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 181 (68.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PS+L + G+P + QE G F++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 239 MTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYG 297
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1291 AACKPQAEESSTPQNVDGGRTNAEF-LEPKTPSP 1323
A CKPQ P+ D + + P TP+P
Sbjct: 534 ALCKPQTPSPEKPRE-DLHIPDISLDVRPNTPTP 566
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 637 KAQMCEF-EDIIRASQDIFV 655
+A +C +D+++ S D+FV
Sbjct: 299 QAILCSCRKDMVKISMDVFV 318
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 181 (68.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++PS+L + G+P + QE G F++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 239 MTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYG 297
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1291 AACKPQAEESSTPQNVDGGRTNAEF-LEPKTPSP 1323
A CKPQ P+ D + + P TP+P
Sbjct: 534 ALCKPQTPSPEKPRE-DLHIPDISLDVRPNTPTP 566
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 637 KAQMCEF-EDIIRASQDIFV 655
+A +C +D+++ S D+FV
Sbjct: 299 QAILCSCRKDMVKISMDVFV 318
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 174 (66.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1271 DEWYHIDC-VKLLSA 1284
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 696 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA 741
RL D+ F + +K++ + ++VIN+ R +++ S L A
Sbjct: 1017 RLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYR-EDYIESALYRA 1061
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1037 CPYCQYFESESVSQFGGSPLRFGGKRSDL 1065
C C F++ +FGG G SDL
Sbjct: 668 CAVCMIFQTYHQVEFGGFNQNCGNA-SDL 695
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 158 (60.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 960 MISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKT 1019
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ A S E+LL +A ++ + P L LL + E R +L+ G
Sbjct: 1020 AKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDTELRQRRQLYEAG 1079
Query: 147 I----------IKSTPMGPRKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ ST M +K P +++ E + C IC+ YLS V F CL
Sbjct: 1080 LHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1138
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L ++YR+ ++ L
Sbjct: 1139 ECALRHVEKQKSCRGLKMMYRYDEEQIISL 1168
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 158 (60.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 973 MISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKT 1032
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 146
A ++ A S E+LL +A ++ + P L LL + E R +L+ G
Sbjct: 1033 AKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDTELRQRRQLYEAG 1092
Query: 147 I----------IKSTPMGPRKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 194
+ ST M +K P +++ E + C IC+ YLS V F CL
Sbjct: 1093 LHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1151
Query: 195 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 222
E H+ + K+ R L ++YR+ ++ L
Sbjct: 1152 ECALRHVEKQKSCRGLKMMYRYDEEQIISL 1181
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 161 (61.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 53/206 (25%), Positives = 96/206 (46%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M+ P +L + GV + + Q+PG F++ FPR+Y + G +E+V FA WL
Sbjct: 2134 MVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLD---LA 2190
Query: 90 ADLYQQYHKA---AVLSHEELLCVVAKSD-LDSKVSPYLKRELLRVYTKERMWRERLWRK 145
D ++ H++ A+ S E+LL + ++S+ + L V KE RE+L
Sbjct: 2191 KDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAA 2250
Query: 146 GIIKSTPMGPRKCPEYVGTEEDP------TCIICRQYLYLSAVACRCRPAAFVCLEH-WE 198
G+ + + K + ++ P C +CR LY+S V R CL+H +
Sbjct: 2251 GVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQHALK 2308
Query: 199 HLCE--CKTRKLHLLYRHTLAELYDL 222
+L + ++ L+Y + + ++ L
Sbjct: 2309 NLNNGNIQAKQCKLIYAYNVDDIQQL 2334
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 175 (66.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1248 RSMLYCI-CRKPYDEKAMIACYQCD-EW----YHIDC 1278
R L C+ CRK +K AC QC E +H+ C
Sbjct: 867 RWKLKCVYCRKRM-KKVSGACIQCSCEHCSTSFHVTC 902
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1264 MIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQA 1297
+IAC +C H C + PE+ + C+ C A
Sbjct: 777 LIACAKCCLQVHASCYGI--RPELVNEGWTCSRCTAHA 812
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 644 EDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL 703
+D+++ S D+FV + L + E+ W + +L + S L S
Sbjct: 311 KDMVKISMDVFVRI--LQPERYEL-----WKQGKDLTVLDHTRPTALSSPELSTWSASRA 363
Query: 704 VSQSKFLK--ISLKEQTELEK 722
++K L+ ISLKE +K
Sbjct: 364 SLKAKLLRRQISLKENRHWKK 384
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 21/85 (24%), Positives = 30/85 (35%)
Query: 1239 EKELKSLRARSMLYCICRK-PYDEKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQA 1297
E E K MLY + R P K ++C Q E + A P
Sbjct: 550 EPEAKPRPVIPMLYVVPRPGPTGNKGRVSCQQASEHF----------------AQKGPTW 593
Query: 1298 EESSTPQNVDGGRTNAEFLEPKTPS 1322
+E +TP + G + E + PS
Sbjct: 594 KEQATPMELTGPEEESGASEGQNPS 618
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 175 (66.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1248 RSMLYCI-CRKPYDEKAMIACYQCD-EW----YHIDC 1278
R L C+ CRK +K AC QC E +H+ C
Sbjct: 884 RWKLKCVYCRKRM-KKVSGACIQCSCEHCSTSFHVTC 919
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1264 MIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQA 1297
+IAC +C H C + PE+ + C+ C A
Sbjct: 794 LIACAKCCLQVHASCYGI--RPELVNEGWTCSRCTAHA 829
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 644 EDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL 703
+D+++ S D+FV + L + E+ W + +L + S L S
Sbjct: 311 KDMVKISMDVFVRI--LQPERYEL-----WKQGKDLTVLDHTRPTALSSPELSTWSASRA 363
Query: 704 VSQSKFLK--ISLKEQTELEK 722
++K L+ ISLKE K
Sbjct: 364 SLKAKLLRRQISLKENRHWRK 384
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 174 (66.3 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1271 DEWYHIDC-VKLLSA 1284
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1037 CPYCQYFESESVSQFGGSPLRFGGKRSDL 1065
C C F++ +FGG G SDL
Sbjct: 668 CAVCMIFQTYHQVEFGGFNQNCGNA-SDL 695
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 153 (58.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 58/214 (27%), Positives = 97/214 (45%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL G+ V+ +Q+ G FV+ FP ++ + G + +E V+FA W+ G
Sbjct: 1054 MISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEA 1113
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLD-------SKVSPYLKRELLRVYTKERMWRERL 142
A + A S E+LL +A ++ S +S LK +L + K+R + L
Sbjct: 1114 AKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLLK-DLRNIEMKQR---QEL 1169
Query: 143 WRKGIIKS----------TPMGPRKCP-EYVGTEE-DPTCIICRQYLYLSAVACRCRPAA 190
+ G++ S +P RK P +++ E + C +C+ YLS V
Sbjct: 1170 YEAGLLSSARYCTHDHNQSPADTRKKPRKWLALESSERRCQMCQHLCYLSMVVQENENVV 1229
Query: 191 FVCLEHWEHLCEC--KTRKLHLLYRHTLAELYDL 222
F CLE H E R L ++YR+ ++ L
Sbjct: 1230 F-CLECALHYVEKHKNCRGLKMMYRYDEEQINSL 1262
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 174 (66.3 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 151 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 209
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1271 DEWYHIDC-VKLLSA 1284
D W H+ C V +L A
Sbjct: 698 DRWVHVSCAVAILEA 712
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1037 CPYCQYFESESVSQFGG 1053
C C F++ +FGG
Sbjct: 575 CAVCMIFQTYHQVEFGG 591
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 174 (66.3 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1271 DEWYHIDC-VKLLSA 1284
D W H+ C V +L A
Sbjct: 793 DRWVHVSCAVAILEA 807
Score = 37 (18.1 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1037 CPYCQYFESESVSQFGG 1053
C C F++ +FGG
Sbjct: 670 CAVCMIFQTYHQVEFGG 686
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 157 (60.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F+ +M D F + L M++P+ L ++G+ V + G F+IT+P YHAG
Sbjct: 253 FYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAG 312
Query: 65 FNFGLNCAEAVNFAPADWLPHG 86
FN+ N AE+VNFA DW G
Sbjct: 313 FNYDYNLAESVNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 563 VDDLPLVEVELKKAHCREKALKAC 586
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 157 (60.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F+ +M D F + L M++P+ L ++G+ V + G F+IT+P YHAG
Sbjct: 253 FYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAG 312
Query: 65 FNFGLNCAEAVNFAPADWLPHG 86
FN+ N AE+VNFA DW G
Sbjct: 313 FNYDYNLAESVNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 563 VDDLPLVEVELKKAHCREKALKAC 586
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 157 (60.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F+ +M D F + L M++P+ L ++G+ V + G F+IT+P YHAG
Sbjct: 253 FYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAG 312
Query: 65 FNFGLNCAEAVNFAPADWLPHG 86
FN+ N AE+VNFA DW G
Sbjct: 313 FNYDYNLAESVNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 563 VDDLPLVEVELKKAHCREKALKAC 586
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 157 (60.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 5 FFQVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAG 64
F+ +M D F + L M++P+ L ++G+ V + G F+IT+P YHAG
Sbjct: 253 FYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAG 312
Query: 65 FNFGLNCAEAVNFAPADWLPHG 86
FN+ N AE+VNFA DW G
Sbjct: 313 FNYDYNLAESVNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 563 VDDLPLVEVELKKAHCREKALKAC 586
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 160 (61.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
++ P +L + G+P +++Q P F+ITFPR YH GFN G N AE+ NFA W+ +G
Sbjct: 324 LVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRWIDYG 380
Score = 38 (18.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 1026 EVDRNHA---EAYICPYCQYFE 1044
E + NHA E C CQYF+
Sbjct: 523 EREFNHARRAEWPHCAVCQYFQ 544
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 174 (66.3 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 28 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 86
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1271 DEWYHIDC-VKLLSA 1284
D W H+ C V +L A
Sbjct: 793 DRWVHVSCAVAILEA 807
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1037 CPYCQYFESESVSQFGG 1053
C C F++ +FGG
Sbjct: 670 CAVCMIFQTYHQVEFGG 686
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 800 KKALSFLSVSPSLEDVESLMAVAEGLSTR 828
KK+ S L S S + + S +E LS R
Sbjct: 508 KKSSSSLGSSSSRDSISSDSETSEPLSCR 536
>UNIPROTKB|J3QQQ8 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
Ensembl:ENST00000581258 Uniprot:J3QQQ8
Length = 420
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 1230 EGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAP 1285
E + + VY+ + K + S LYCICR PYDE I C +C WYH CV +L S
Sbjct: 229 EAKKMDVYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEA 288
Query: 1286 EI---YICAACKPQAEESST 1302
E+ Y+C C+ E++ T
Sbjct: 289 ELIDEYVCPQCQ-STEDAMT 307
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQA 1297
K + + LYCIC+ PYDE K I C C WYH +CV K ++YIC CK +A
Sbjct: 186 KETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCK-RA 244
Query: 1298 EESSTPQ 1304
+E S+ +
Sbjct: 245 QEGSSEE 251
>DICTYBASE|DDB_G0270880 [details] [associations]
symbol:gflC "PHD zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
dictyBase:DDB_G0270880 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG243978 RefSeq:XP_001134472.1
ProteinModelPortal:Q1ZXQ2 EnsemblProtists:DDB0231781 GeneID:8616983
KEGG:ddi:DDB_G0270880 InParanoid:Q1ZXQ2 OMA:HECEDEA Uniprot:Q1ZXQ2
Length = 1720
Score = 142 (55.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 1248 RSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLS--APEI--YICAACKPQAEE 1299
+ LYC+C+K YD+ K MIAC +CDEWYH DCV + A I Y+CA C + E+
Sbjct: 1125 KDRLYCVCQKKYDKTKFMIACDRCDEWYHGDCVYISEKDAKRIKSYVCANCIKKKEK 1181
>UNIPROTKB|E9PE19 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
IPI:IPI00384109 PRIDE:E9PE19 Ensembl:ENST00000342579
UCSC:uc002jgh.3 ArrayExpress:E9PE19 Bgee:E9PE19 Uniprot:E9PE19
Length = 650
Score = 136 (52.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 1230 EGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAP 1285
E + + VY+ + K + S LYCICR PYDE I C +C WYH CV +L S
Sbjct: 449 EAKKMDVYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEA 508
Query: 1286 EI---YICAACKPQAEESST 1302
E+ Y+C C+ E++ T
Sbjct: 509 ELIDEYVCPQCQ-STEDAMT 527
Score = 135 (52.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQA 1297
K + + LYCIC+ PYDE K I C C WYH +CV K ++YIC CK +A
Sbjct: 406 KETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCK-RA 464
Query: 1298 EESSTPQ 1304
+E S+ +
Sbjct: 465 QEGSSEE 471
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2530 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2588
Query: 1298 EESST 1302
E++ T
Sbjct: 2589 EDAMT 2593
Score = 67 (28.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2578 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2636
Query: 1298 EESST 1302
E++ T
Sbjct: 2637 EDAMT 2641
Score = 67 (28.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 254 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 295
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2656 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2714
Query: 1298 EESST 1302
E++ T
Sbjct: 2715 EDAMT 2719
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2667 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2725
Query: 1298 EESST 1302
E++ T
Sbjct: 2726 EDAMT 2730
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 195 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 236
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2860 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2918
Query: 1298 EESST 1302
E++ T
Sbjct: 2919 EDAMT 2923
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
>UNIPROTKB|F1NGH4 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00530000063844
EMBL:AADN02019222 EMBL:AADN02019223 IPI:IPI00599739
Ensembl:ENSGALT00000009067 ArrayExpress:F1NGH4 Uniprot:F1NGH4
Length = 660
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 1230 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---- 1285
E E LP K + + LYCICR+P++ + MI C +C+EW+H DCV + A
Sbjct: 343 EPEELPK--SKPESEIYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLL 400
Query: 1286 ----EIYICAAC---KPQAEE-SSTPQN-VDGGRTNAEFLE 1317
E YIC C + Q E S T Q G+ N + E
Sbjct: 401 ERNGEDYICPNCTILQGQDESISETDQQEAKAGQVNVDGTE 441
>TAIR|locus:2120252 [details] [associations]
symbol:SHL1 "short life" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006833 "water transport" evidence=RCA] [GO:0006972
"hyperosmotic response" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009266 "response to temperature
stimulus" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR001025
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00439
GO:GO:0005634 EMBL:CP002687 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0009791 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AF277453 EMBL:AY050934
EMBL:AY079396 IPI:IPI00526215 RefSeq:NP_568053.1 UniGene:At.47993
UniGene:At.70103 ProteinModelPortal:Q9FEN9 SMR:Q9FEN9 IntAct:Q9FEN9
STRING:Q9FEN9 PRIDE:Q9FEN9 EnsemblPlants:AT4G39100.1 GeneID:830065
KEGG:ath:AT4G39100 TAIR:At4g39100 InParanoid:Q9FEN9 OMA:YDVQSAD
PhylomeDB:Q9FEN9 ProtClustDB:CLSN2689831 Genevestigator:Q9FEN9
Uniprot:Q9FEN9
Length = 228
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 1248 RSMLYCICRKPYD-EKAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQAEE--- 1299
R ++C C PY+ + M+ C +C EW+H C+ + P+ + C C PQ +
Sbjct: 137 RVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHN 196
Query: 1300 -SSTPQNVDGGRTNAEFLEPKTPSPKHT 1326
+ST N D LE KHT
Sbjct: 197 SNSTSNNRDAKVNGKRSLEVTKSKNKHT 224
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 125 (49.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2708 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2766
Query: 1298 EESST 1302
E++ T
Sbjct: 2767 EDAMT 2771
Score = 67 (28.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 125 (49.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2766 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2824
Query: 1298 EESST 1302
E++ T
Sbjct: 2825 EDAMT 2829
Score = 67 (28.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
>FB|FBgn0030120 [details] [associations]
symbol:CG17440 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG243978
GeneTree:ENSGT00530000063643 InterPro:IPR022056 Pfam:PF12269
EMBL:AY089443 RefSeq:NP_572555.1 UniGene:Dm.5009 SMR:Q8T3Y1
IntAct:Q8T3Y1 MINT:MINT-278662 EnsemblMetazoa:FBtr0071328
GeneID:31879 KEGG:dme:Dmel_CG17440 UCSC:CG17440-RA
FlyBase:FBgn0030120 InParanoid:Q8T3Y1 GenomeRNAi:31879
NextBio:775769 Uniprot:Q8T3Y1
Length = 366
Score = 127 (49.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 1215 DSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWY 1274
D+ + +++ IA +LP K L+ + YCICR + MI C C+EWY
Sbjct: 3 DNDKKTEEEIRREIAREFDLPERKSKIATILKQKDREYCICRSSDCSRFMIGCDGCEEWY 62
Query: 1275 HIDCVKLLS--APEI--YICAACKPQAEESST 1302
H DC+++ A I Y C CK + E T
Sbjct: 63 HGDCIEITEKDAEHIKNYYCRRCKKENPELQT 94
Score = 43 (20.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1297 AEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEP 1337
++++ P R N+ EPK P T + K KA P
Sbjct: 137 SQQAPPPTTAAAKRKNSSAQEPKESQP--TQAGTKRDKAAP 175
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 125 (49.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1243 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1297
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2827 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2885
Query: 1298 EESST 1302
E++ T
Sbjct: 2886 EDAMT 2890
Score = 67 (28.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 145 (56.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 62/242 (25%), Positives = 102/242 (42%)
Query: 30 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 89
M++P VL GV VY +Q G F++ FP ++ A G + +E ++FA W+ G
Sbjct: 921 MISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQWMKLGYEA 980
Query: 90 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLR-VYTKERMWRERLWRKGII 148
A ++ S E+LL + + D+K L R + E R L+ G+
Sbjct: 981 AKDLKRRRIEEPFSTEKLLYQITTCERDNKQLMTAVSSLFRDLRDAEIRQRRELFEAGLR 1040
Query: 149 KSTPMG-----P---RKCPEYVGTEE--DPTCIICRQYLYLSAVACRCRPAAFVCLE-HW 197
S G P RK TE+ D C +C+ YLS V F CLE
Sbjct: 1041 LSARYGTNCESPTERRKQQRSRFTEDTADRRCQVCQHLCYLSMVVHESDNVVF-CLECAL 1099
Query: 198 EHLCECKT-RKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRPTTLTKK 256
++ + ++ R L +++R++ +L L V+R +R + S P + +
Sbjct: 1100 RYIQKRRSPRGLKMMFRYSEEQLNSL---VNRVCGRTLDKAGVKQRSVGPSKTPAKRSPR 1156
Query: 257 VK 258
K
Sbjct: 1157 NK 1158
Score = 38 (18.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 TFFFQVMRSSLPDLFDAQPD 22
T FF+ R+++ F +PD
Sbjct: 760 TTFFRAARNTMNMCFSKEPD 779
>UNIPROTKB|H0YI82 [details] [associations]
symbol:ASH1L "Histone-lysine N-methyltransferase ASH1L"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL139410 EMBL:AL353807
HGNC:HGNC:19088 ChiTaRS:ASH1L Ensembl:ENST00000492987
Uniprot:H0YI82
Length = 154
Score = 109 (43.4 bits), Expect = 0.00046, P = 0.00046
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 1221 LDKVF-ELIAEGENLPVYL-EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDC 1278
+D++ E +E ++ + EKE + ++ CIC DE MI C +C W H DC
Sbjct: 40 IDEIVGETASEADSSETSVSEKENGHEKDDDVIRCICGLYKDEGLMIQCDKCMVWQHCDC 99
Query: 1279 VKLLSAPEIYICAACKPQ 1296
+ + S E Y+C C P+
Sbjct: 100 MGVNSDVEHYLCEQCDPR 117
>UNIPROTKB|E2RCA1 [details] [associations]
symbol:DIDO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00530000063844
EMBL:AAEX03014133 Ensembl:ENSCAFT00000038284 Uniprot:E2RCA1
Length = 559
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 1215 DSGALSLD-KVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEW 1273
D G L+ K + I G+ V +K + LYCICR+P++ + MI C +C+EW
Sbjct: 231 DGGDRELEGKAAQGIEGGDPGDVGRQKPECEAYEPNALYCICRQPHNNRFMICCDRCEEW 290
Query: 1274 YHIDCVKLLSAP--------EIYICAACKP-QAEESSTPQNVD 1307
+H DCV + A E YIC C Q ++ + ++ +
Sbjct: 291 FHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETNSESTE 333
>RGD|1311173 [details] [associations]
symbol:Dido1 "death inducer-obliterator 1" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1311173 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063844 IPI:IPI00949673
Ensembl:ENSRNOT00000066451 UCSC:RGD:1311173 ArrayExpress:D4A6I1
Uniprot:D4A6I1
Length = 616
Score = 125 (49.1 bits), Expect = 0.00068, P = 0.00068
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 1251 LYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP--------EIYICAAC---KPQAEE 1299
LYCICR+P++ + MI C +C+EW+H DCV + A E YIC C + Q E
Sbjct: 266 LYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDET 325
Query: 1300 SST 1302
SS+
Sbjct: 326 SSS 328
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 127 (49.8 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1212 VVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDE-KAMIACYQC 1270
V + S D+ +L A + K + + LYCIC+ PYDE K I C +C
Sbjct: 2572 VPISSQKRKRDEERDLSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRC 2631
Query: 1271 DEWYHIDCVKLLSAP----EIYICAACKPQAEESST 1302
WYH CV +L + + Y+C C+ E++ T
Sbjct: 2632 QNWYHGRCVGILQSEADLIDEYVCPQCQ-STEDAMT 2666
Score = 67 (28.6 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 253 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 294
Score = 47 (21.6 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1090 EVVDVA--LECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAR-EAAGVFDRQSNSALD 1146
++++V+ +TC VK S LD L + T+ K R E + N +
Sbjct: 1019 DIINVSEGFHLRTCYKRKVK--SSKLDGLLERRIKQFTLEEKQRLERMKLEASAKNGGIQ 1076
Query: 1147 -FALARNLWRVRVSKLLEGLTKPTIGQIQNYLKE 1179
+ +NL +++ K+ EG T Q Q Y+ +
Sbjct: 1077 SLSSQKNLDELQMKKVKEGSQSVTSSQNQTYVSD 1110
>UNIPROTKB|B0QZZ2 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
IPI:IPI00879803 SMR:B0QZZ2 Ensembl:ENST00000437224
HOGENOM:HOG000197780 HOVERGEN:HBG097304 Uniprot:B0QZZ2
Length = 115
Score = 100 (40.3 bits), Expect = 0.00070, P = 0.00070
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1251 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1294
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|B0QZZ3 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
HOGENOM:HOG000197780 HOVERGEN:HBG097304 IPI:IPI00744123 SMR:B0QZZ3
Ensembl:ENST00000425862 Uniprot:B0QZZ3
Length = 126
Score = 100 (40.3 bits), Expect = 0.00070, P = 0.00070
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1251 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1294
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|B0QZZ4 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
IPI:IPI00879292 SMR:B0QZZ4 Ensembl:ENST00000433120
Ensembl:ENST00000445025 Uniprot:B0QZZ4
Length = 97
Score = 100 (40.3 bits), Expect = 0.00070, P = 0.00070
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1251 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1294
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|Q5JPR8 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
HOGENOM:HOG000197780 HOVERGEN:HBG097304 IPI:IPI00645913 SMR:Q5JPR8
Ensembl:ENST00000415025 Uniprot:Q5JPR8
Length = 114
Score = 100 (40.3 bits), Expect = 0.00070, P = 0.00070
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1251 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1294
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|K7GQN1 [details] [associations]
symbol:PHF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00550000074396 EMBL:FP015844
Ensembl:ENSSSCT00000034159 Uniprot:K7GQN1
Length = 97
Score = 100 (40.3 bits), Expect = 0.00070, P = 0.00070
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1251 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1294
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 127 (49.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1212 VVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDE-KAMIACYQC 1270
V + S D+ +L A + K + + LYCIC+ PYDE K I C +C
Sbjct: 2585 VPISSQKRKRDEERDLSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRC 2644
Query: 1271 DEWYHIDCVKLLSAP----EIYICAACKPQAEESST 1302
WYH CV +L + + Y+C C+ E++ T
Sbjct: 2645 QNWYHGRCVGILQSEADLIDEYVCPQCQ-STEDAMT 2679
Score = 67 (28.6 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 998 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1037
C K + L C C YHL+C++P EV + + +C
Sbjct: 253 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 294
Score = 47 (21.6 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1090 EVVDVA--LECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAR-EAAGVFDRQSNSALD 1146
++++V+ +TC VK S LD L + T+ K R E + N +
Sbjct: 889 DIINVSEGFHLRTCYKRKVK--SSKLDGLLERRIKQFTLEEKQRLERMKLEASAKNGGIQ 946
Query: 1147 -FALARNLWRVRVSKLLEGLTKPTIGQIQNYLKE 1179
+ +NL +++ K+ EG T Q Q Y+ +
Sbjct: 947 SLSSQKNLDELQMKKVKEGSQSVTSSQNQTYVSD 980
>UNIPROTKB|F1NFF0 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.472.30 InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:AADN02019222 EMBL:AADN02019223
IPI:IPI00821338 Ensembl:ENSGALT00000039659 ArrayExpress:F1NFF0
Uniprot:F1NFF0
Length = 2253
Score = 130 (50.8 bits), Expect = 0.00093, P = 0.00093
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 1230 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---- 1285
E E LP K + + LYCICR+P++ + MI C +C+EW+H DCV + A
Sbjct: 271 EPEELPK--SKPESEIYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLL 328
Query: 1286 ----EIYICAAC---KPQAEE-SSTPQN-VDGGRTNAEFLE 1317
E YIC C + Q E S T Q G+ N + E
Sbjct: 329 ERNGEDYICPNCTILQGQDESISETDQQEAKAGQVNVDGTE 369
>UNIPROTKB|F1NGH5 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
GO:GO:0005634 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.472.30 InterPro:IPR012921 Pfam:PF07744
SUPFAM:SSF46942 OMA:PNRMCAD GeneTree:ENSGT00530000063844
EMBL:AADN02019222 EMBL:AADN02019223 IPI:IPI00577866
Ensembl:ENSGALT00000009066 ArrayExpress:F1NGH5 Uniprot:F1NGH5
Length = 2287
Score = 130 (50.8 bits), Expect = 0.00094, P = 0.00094
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 1230 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---- 1285
E E LP K + + LYCICR+P++ + MI C +C+EW+H DCV + A
Sbjct: 271 EPEELPK--SKPESEIYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLL 328
Query: 1286 ----EIYICAAC---KPQAEE-SSTPQN-VDGGRTNAEFLE 1317
E YIC C + Q E S T Q G+ N + E
Sbjct: 329 ERNGEDYICPNCTILQGQDESISETDQQEAKAGQVNVDGTE 369
>FB|FBgn0030121 [details] [associations]
symbol:Cfp1 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0048188 "Set1C/COMPASS complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
InterPro:IPR001965 InterPro:IPR002857 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02008 PROSITE:PS50016 PROSITE:PS51058
SMART:SM00249 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
EMBL:AE014298 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0048188 GO:GO:0051568
eggNOG:NOG246725 GeneTree:ENSGT00530000063643 KO:K14960 OMA:YESQASF
InterPro:IPR022056 Pfam:PF12269 HSSP:Q80TJ7 RefSeq:NP_572556.1
ProteinModelPortal:Q9W352 SMR:Q9W352 IntAct:Q9W352 MINT:MINT-343493
STRING:Q9W352 PaxDb:Q9W352 PRIDE:Q9W352 EnsemblMetazoa:FBtr0071327
GeneID:31880 KEGG:dme:Dmel_CG17446 UCSC:CG17446-RA
FlyBase:FBgn0030121 InParanoid:Q9W352 OrthoDB:EOG43BK42
PhylomeDB:Q9W352 GenomeRNAi:31880 NextBio:775774 Bgee:Q9W352
Uniprot:Q9W352
Length = 663
Score = 124 (48.7 bits), Expect = 0.00096, P = 0.00096
Identities = 29/79 (36%), Positives = 36/79 (45%)
Query: 1228 IAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS--AP 1285
IA +LP K L+ YCICR + MI C C+EWYH DC+ + A
Sbjct: 38 IAREFDLPERKSKIATILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAK 97
Query: 1286 EI--YICAACKPQAEESST 1302
I Y C CK + E T
Sbjct: 98 HIKQYYCRRCKKENPELQT 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1391 1380 0.00089 124 3 11 22 0.37 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 137
No. of states in DFA: 638 (68 KB)
Total size of DFA: 659 KB (2286 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:08
No. of threads or processors used: 24
Search cpu time: 126.83u 0.08s 126.91t Elapsed: 00:00:21
Total cpu time: 126.89u 0.09s 126.98t Elapsed: 00:00:29
Start: Mon May 20 14:54:10 2013 End: Mon May 20 14:54:39 2013
WARNINGS ISSUED: 1