Query 000612
Match_columns 1391
No_of_seqs 827 out of 5200
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 20:39:33 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000612.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000612hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 1E-246 3E-251 2267.2 94.3 1271 36-1391 12-1305(1391)
2 PLN03140 ABC transporter G fam 100.0 7E-225 2E-229 2227.8 134.3 1363 19-1385 19-1397(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-179 4E-184 1800.6 126.4 1227 93-1386 2-1287(1394)
4 KOG0061 Transporter, ABC super 100.0 9.5E-89 2.1E-93 849.5 48.2 511 852-1386 22-540 (613)
5 PLN03211 ABC transporter G-25; 100.0 8.7E-87 1.9E-91 840.8 54.1 517 852-1385 36-586 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1E-85 2.3E-90 833.0 49.5 498 879-1386 36-543 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 3.9E-82 8.4E-87 854.8 53.9 524 852-1386 26-603 (1394)
8 PLN03140 ABC transporter G fam 100.0 5.2E-82 1.1E-86 848.5 50.6 528 850-1385 126-719 (1470)
9 KOG0061 Transporter, ABC super 100.0 6.7E-80 1.5E-84 769.9 58.5 583 114-775 21-608 (613)
10 PLN03211 ABC transporter G-25; 100.0 5.3E-79 1.1E-83 770.0 64.0 609 114-775 35-658 (659)
11 TIGR00955 3a01204 The Eye Pigm 100.0 2.2E-79 4.8E-84 775.3 59.2 569 162-774 35-612 (617)
12 KOG0055 Multidrug/pheromone ex 100.0 2.1E-78 4.5E-83 761.0 46.8 842 78-1093 314-1208(1228)
13 KOG0065 Pleiotropic drug resis 100.0 1.1E-74 2.4E-79 724.4 33.9 497 879-1385 126-641 (1391)
14 KOG0054 Multidrug resistance-a 100.0 4E-72 8.8E-77 721.8 53.6 810 78-1093 483-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 4.4E-70 9.6E-75 731.3 72.4 224 855-1105 1937-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 4.1E-68 8.8E-73 725.0 65.2 211 854-1093 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 1.5E-67 3.1E-72 720.6 61.5 211 854-1093 1233-1453(1495)
18 PTZ00265 multidrug resistance 100.0 3.2E-67 6.8E-72 709.9 55.4 217 854-1093 1164-1447(1466)
19 TIGR00957 MRP_assoc_pro multi 100.0 2.9E-66 6.2E-71 708.8 57.6 211 854-1093 1283-1503(1522)
20 COG1123 ATPase components of v 100.0 5E-66 1.1E-70 611.8 50.1 491 118-1093 5-514 (539)
21 PRK13549 xylose transporter AT 100.0 4E-64 8.6E-69 625.6 50.1 457 166-1095 19-491 (506)
22 TIGR01271 CFTR_protein cystic 100.0 4.5E-63 9.7E-68 675.2 62.1 210 854-1093 1216-1435(1490)
23 PRK10762 D-ribose transporter 100.0 8.4E-64 1.8E-68 621.9 49.1 449 166-1095 18-481 (501)
24 PRK09700 D-allose transporter 100.0 5.8E-64 1.3E-68 625.2 47.7 457 166-1093 19-493 (510)
25 PRK10261 glutathione transport 100.0 1.9E-63 4E-68 630.8 52.3 490 165-1093 29-548 (623)
26 PTZ00243 ABC transporter; Prov 100.0 3.1E-63 6.6E-68 676.6 56.3 211 854-1093 1307-1528(1560)
27 TIGR03269 met_CoM_red_A2 methy 100.0 4.7E-63 1E-67 618.4 51.9 217 856-1093 280-512 (520)
28 PRK15134 microcin C ABC transp 100.0 4.7E-63 1E-67 619.2 51.1 464 165-1093 22-510 (529)
29 PRK15439 autoinducer 2 ABC tra 100.0 7E-63 1.5E-67 614.0 49.5 452 166-1094 25-488 (510)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1.5E-62 3.2E-67 611.6 49.5 457 166-1093 15-487 (500)
31 PRK11288 araG L-arabinose tran 100.0 1.4E-62 3.1E-67 610.9 49.3 451 166-1096 18-483 (501)
32 PRK10982 galactose/methyl gala 100.0 3.3E-61 7.2E-66 597.6 48.8 450 165-1094 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 2E-60 4.3E-65 591.0 44.1 215 855-1091 260-485 (490)
34 COG4172 ABC-type uncharacteriz 100.0 3.1E-59 6.7E-64 518.3 44.4 470 163-1093 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 4.7E-58 1E-62 576.0 57.0 201 855-1092 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 5.7E-58 1.2E-62 573.5 51.2 198 855-1093 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.5E-57 5.4E-62 569.5 56.2 201 855-1092 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.8E-55 6.1E-60 556.3 53.0 197 855-1093 312-512 (638)
39 PRK11147 ABC transporter ATPas 100.0 5.7E-55 1.2E-59 555.2 51.8 202 855-1093 319-523 (635)
40 PRK13409 putative ATPase RIL; 100.0 3E-55 6.4E-60 547.8 41.4 211 855-1107 340-554 (590)
41 COG1129 MglA ABC-type sugar tr 100.0 2.7E-54 5.8E-59 509.1 43.2 451 163-1093 19-485 (500)
42 PLN03073 ABC transporter F fam 100.0 5.4E-53 1.2E-57 535.8 46.9 200 855-1093 508-709 (718)
43 COG0488 Uup ATPase components 100.0 1.9E-52 4.1E-57 508.0 46.2 218 165-412 16-238 (530)
44 COG3845 ABC-type uncharacteriz 100.0 3.7E-50 8E-55 462.5 39.8 457 164-1094 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 5.1E-44 1.1E-48 371.7 21.7 220 164-435 14-238 (240)
46 KOG0927 Predicted transporter 100.0 8.5E-43 1.9E-47 401.7 30.5 203 853-1093 387-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 4.1E-43 8.8E-48 365.0 22.5 214 856-1093 3-220 (240)
48 COG1125 OpuBA ABC-type proline 100.0 3.3E-42 7.2E-47 364.0 20.4 210 164-414 13-225 (309)
49 COG1135 AbcC ABC-type metal io 100.0 4.9E-42 1.1E-46 374.3 22.4 224 163-437 17-246 (339)
50 COG1131 CcmA ABC-type multidru 100.0 4E-41 8.6E-46 387.0 25.2 223 856-1106 5-230 (293)
51 COG3839 MalK ABC-type sugar tr 100.0 2.7E-41 5.8E-46 385.0 22.8 217 167-434 18-235 (338)
52 KOG0058 Peptide exporter, ABC 100.0 4.8E-42 1E-46 411.6 17.5 255 78-414 431-691 (716)
53 COG1135 AbcC ABC-type metal io 100.0 3.4E-41 7.3E-46 367.8 20.5 218 856-1093 2-226 (339)
54 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.5E-41 1.8E-45 365.1 23.7 217 855-1095 4-224 (254)
55 COG1120 FepC ABC-type cobalami 100.0 2.5E-41 5.5E-46 371.4 19.7 210 165-413 15-227 (258)
56 COG3842 PotA ABC-type spermidi 100.0 4.2E-41 9.2E-46 385.3 22.2 223 165-437 18-241 (352)
57 COG1127 Ttg2A ABC-type transpo 100.0 9.6E-41 2.1E-45 352.6 22.3 231 855-1109 8-250 (263)
58 COG1120 FepC ABC-type cobalami 100.0 1.2E-40 2.6E-45 366.1 21.3 218 855-1094 2-224 (258)
59 COG1116 TauB ABC-type nitrate/ 100.0 2.3E-40 5.1E-45 356.1 22.5 194 165-403 16-211 (248)
60 COG1127 Ttg2A ABC-type transpo 100.0 2.5E-40 5.5E-45 349.4 22.3 209 165-414 21-235 (263)
61 COG1118 CysA ABC-type sulfate/ 100.0 8.5E-41 1.8E-45 363.4 19.1 223 164-435 14-240 (345)
62 COG1116 TauB ABC-type nitrate/ 100.0 3.9E-40 8.4E-45 354.4 22.0 204 855-1084 3-207 (248)
63 COG1131 CcmA ABC-type multidru 100.0 7.3E-40 1.6E-44 376.6 25.4 212 164-418 17-230 (293)
64 COG3638 ABC-type phosphate/pho 100.0 2E-40 4.3E-45 349.3 18.6 220 855-1095 3-234 (258)
65 TIGR01257 rim_protein retinal- 100.0 2.5E-35 5.4E-40 397.3 71.2 216 854-1093 927-1144(2272)
66 COG1136 SalX ABC-type antimicr 100.0 1.1E-39 2.4E-44 351.7 23.5 193 881-1085 18-219 (226)
67 COG1125 OpuBA ABC-type proline 100.0 4E-40 8.7E-45 348.3 19.4 213 856-1093 2-220 (309)
68 COG1117 PstB ABC-type phosphat 100.0 5.3E-40 1.1E-44 339.5 18.4 221 165-433 20-248 (253)
69 COG2274 SunT ABC-type bacterio 100.0 6.9E-40 1.5E-44 410.6 20.6 258 78-414 436-696 (709)
70 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3E-39 6.6E-44 352.9 22.9 208 166-414 18-227 (254)
71 COG3638 ABC-type phosphate/pho 100.0 2.7E-39 6E-44 340.7 21.2 215 165-414 17-237 (258)
72 COG4555 NatA ABC-type Na+ tran 100.0 6.1E-40 1.3E-44 335.6 15.5 201 881-1093 15-217 (245)
73 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-39 2.6E-44 354.4 18.6 205 880-1094 14-223 (345)
74 COG4555 NatA ABC-type Na+ tran 100.0 9.4E-40 2E-44 334.3 16.4 206 165-414 15-222 (245)
75 COG2884 FtsE Predicted ATPase 100.0 3.7E-39 8E-44 327.5 18.9 213 856-1093 2-221 (223)
76 COG1136 SalX ABC-type antimicr 100.0 9.1E-39 2E-43 344.6 22.0 196 165-403 18-220 (226)
77 COG1117 PstB ABC-type phosphat 100.0 6E-39 1.3E-43 331.7 18.5 218 854-1093 6-232 (253)
78 KOG0057 Mitochondrial Fe/S clu 100.0 6.6E-39 1.4E-43 371.6 20.3 229 110-414 343-574 (591)
79 TIGR02314 ABC_MetN D-methionin 100.0 4.2E-38 9E-43 368.3 27.0 206 165-413 18-229 (343)
80 COG3839 MalK ABC-type sugar tr 100.0 1.6E-38 3.6E-43 362.2 22.0 214 855-1093 3-218 (338)
81 KOG0055 Multidrug/pheromone ex 100.0 6.6E-39 1.4E-43 404.8 20.4 258 78-414 951-1213(1228)
82 PRK13537 nodulation ABC transp 100.0 5.9E-38 1.3E-42 364.4 26.9 215 854-1093 6-222 (306)
83 TIGR03265 PhnT2 putative 2-ami 100.0 5E-38 1.1E-42 370.3 26.5 206 166-414 18-224 (353)
84 PRK11432 fbpC ferric transport 100.0 5.7E-38 1.2E-42 369.1 26.6 205 166-413 20-225 (351)
85 PRK11650 ugpC glycerol-3-phosp 100.0 5.3E-38 1.1E-42 370.5 26.1 205 166-413 18-223 (356)
86 TIGR03258 PhnT 2-aminoethylpho 100.0 7.3E-38 1.6E-42 369.2 26.7 206 166-413 19-227 (362)
87 KOG0056 Heavy metal exporter H 100.0 3.5E-39 7.5E-44 363.4 13.6 257 78-414 502-761 (790)
88 COG3842 PotA ABC-type spermidi 100.0 2.3E-38 5E-43 362.9 20.1 215 855-1093 5-221 (352)
89 PRK13537 nodulation ABC transp 100.0 1.5E-37 3.2E-42 361.0 26.7 205 166-414 21-227 (306)
90 COG1124 DppF ABC-type dipeptid 100.0 6E-38 1.3E-42 333.7 21.3 205 166-414 21-231 (252)
91 PRK09452 potA putrescine/sperm 100.0 1.4E-37 3E-42 368.1 26.6 205 166-413 28-233 (375)
92 TIGR02314 ABC_MetN D-methionin 100.0 2.5E-37 5.4E-42 361.7 26.4 217 856-1093 2-225 (343)
93 cd03261 ABC_Org_Solvent_Resist 100.0 3.1E-37 6.8E-42 346.7 25.3 213 857-1093 2-221 (235)
94 COG1122 CbiO ABC-type cobalt t 100.0 1.4E-37 3.1E-42 342.7 21.7 207 165-414 17-228 (235)
95 PRK10851 sulfate/thiosulfate t 100.0 3.7E-37 8.1E-42 362.9 26.5 209 166-413 16-225 (353)
96 TIGR01186 proV glycine betaine 100.0 2.7E-37 5.9E-42 363.1 25.1 208 164-414 5-219 (363)
97 COG1132 MdlB ABC-type multidru 100.0 7.8E-38 1.7E-42 395.7 21.9 255 78-414 295-552 (567)
98 cd03261 ABC_Org_Solvent_Resist 100.0 4.1E-37 8.9E-42 345.8 25.2 206 166-413 14-225 (235)
99 TIGR03265 PhnT2 putative 2-ami 100.0 4.2E-37 9E-42 362.5 26.2 214 855-1093 4-219 (353)
100 PRK11650 ugpC glycerol-3-phosp 100.0 3.5E-37 7.6E-42 363.5 25.5 214 856-1093 4-219 (356)
101 COG0410 LivF ABC-type branched 100.0 2.6E-37 5.7E-42 326.7 21.5 206 165-414 16-226 (237)
102 PRK11607 potG putrescine trans 100.0 6.2E-37 1.4E-41 363.3 27.2 205 166-413 33-238 (377)
103 COG2274 SunT ABC-type bacterio 100.0 7.4E-36 1.6E-40 374.4 38.2 217 849-1093 465-691 (709)
104 COG2884 FtsE Predicted ATPase 100.0 1.3E-37 2.7E-42 316.4 18.0 200 165-408 15-220 (223)
105 PRK11174 cysteine/glutathione 100.0 2.2E-37 4.9E-42 393.7 24.0 255 78-414 314-572 (588)
106 COG3840 ThiQ ABC-type thiamine 100.0 1.5E-37 3.2E-42 312.8 17.4 201 170-413 17-218 (231)
107 PRK11432 fbpC ferric transport 100.0 8E-37 1.7E-41 359.4 26.5 214 855-1093 6-221 (351)
108 PRK11000 maltose/maltodextrin 100.0 7.9E-37 1.7E-41 363.0 26.6 205 166-413 17-222 (369)
109 PRK13536 nodulation factor exp 100.0 1.1E-36 2.4E-41 357.1 27.5 215 854-1093 40-256 (340)
110 TIGR03258 PhnT 2-aminoethylpho 100.0 9E-37 1.9E-41 360.0 26.1 214 855-1093 5-223 (362)
111 COG1122 CbiO ABC-type cobalt t 100.0 4.2E-37 9.1E-42 339.0 21.5 214 856-1093 4-223 (235)
112 PRK11153 metN DL-methionine tr 100.0 1.4E-36 3.1E-41 358.0 26.9 206 165-413 18-229 (343)
113 cd03259 ABC_Carb_Solutes_like 100.0 1E-36 2.3E-41 337.3 24.3 210 857-1091 2-213 (213)
114 PRK13536 nodulation factor exp 100.0 1.2E-36 2.6E-41 356.9 25.2 205 166-414 55-261 (340)
115 COG3840 ThiQ ABC-type thiamine 100.0 3.4E-37 7.5E-42 310.2 17.3 196 886-1093 17-214 (231)
116 TIGR01188 drrA daunorubicin re 100.0 1.1E-36 2.3E-41 354.2 23.9 201 881-1093 6-208 (302)
117 PRK10851 sulfate/thiosulfate t 100.0 1.7E-36 3.7E-41 357.3 25.9 216 856-1093 3-221 (353)
118 TIGR00960 3a0501s02 Type II (G 100.0 1.5E-36 3.3E-41 336.7 23.9 208 856-1086 2-215 (216)
119 KOG0062 ATPase component of AB 100.0 5.7E-36 1.2E-40 343.7 28.8 205 852-1092 359-563 (582)
120 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.7E-36 5.9E-41 335.6 25.6 215 857-1093 2-218 (220)
121 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-36 3.5E-41 335.8 23.6 199 166-407 14-213 (213)
122 cd03269 ABC_putative_ATPase Th 100.0 2.2E-36 4.8E-41 334.0 24.5 209 857-1091 2-210 (210)
123 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-36 5.3E-41 351.4 26.0 214 855-1093 4-219 (303)
124 PRK13637 cbiO cobalt transport 100.0 3E-36 6.6E-41 347.7 26.3 218 165-425 20-248 (287)
125 PRK09452 potA putrescine/sperm 100.0 3E-36 6.5E-41 356.7 26.5 214 855-1093 14-229 (375)
126 cd03265 ABC_DrrA DrrA is the A 100.0 3E-36 6.6E-41 335.2 25.0 212 857-1093 2-216 (220)
127 cd03265 ABC_DrrA DrrA is the A 100.0 2.8E-36 6.1E-41 335.5 24.7 204 166-412 14-219 (220)
128 cd03301 ABC_MalK_N The N-termi 100.0 3.1E-36 6.8E-41 333.5 24.8 210 857-1091 2-213 (213)
129 TIGR01188 drrA daunorubicin re 100.0 1.6E-36 3.5E-41 352.8 23.3 206 165-414 6-213 (302)
130 COG1124 DppF ABC-type dipeptid 100.0 1.2E-36 2.6E-41 323.8 20.1 217 855-1094 3-227 (252)
131 COG0411 LivG ABC-type branched 100.0 5.2E-37 1.1E-41 326.9 17.3 221 163-414 15-239 (250)
132 cd03219 ABC_Mj1267_LivG_branch 100.0 3.7E-36 8.1E-41 338.3 25.3 215 857-1093 2-227 (236)
133 cd03296 ABC_CysA_sulfate_impor 100.0 4.1E-36 9E-41 338.4 25.6 209 166-413 16-225 (239)
134 COG1137 YhbG ABC-type (unclass 100.0 2.4E-37 5.2E-42 316.3 13.9 205 879-1093 15-223 (243)
135 PRK11153 metN DL-methionine tr 100.0 4.2E-36 9.1E-41 354.1 26.1 217 856-1093 2-225 (343)
136 TIGR01288 nodI ATP-binding ABC 100.0 4.4E-36 9.6E-41 349.3 25.9 205 166-414 18-224 (303)
137 cd03296 ABC_CysA_sulfate_impor 100.0 5.8E-36 1.3E-40 337.2 26.0 216 856-1093 3-221 (239)
138 PRK13634 cbiO cobalt transport 100.0 4.1E-36 8.9E-41 347.1 25.2 218 165-425 20-249 (290)
139 KOG0058 Peptide exporter, ABC 100.0 5.8E-37 1.3E-41 368.0 18.7 217 852-1093 462-686 (716)
140 cd03218 ABC_YhbG The ABC trans 100.0 4.7E-36 1E-40 336.7 24.9 212 857-1093 2-217 (232)
141 cd03266 ABC_NatA_sodium_export 100.0 3.7E-36 8E-41 334.2 23.8 215 856-1091 2-218 (218)
142 cd03219 ABC_Mj1267_LivG_branch 100.0 4.4E-36 9.6E-41 337.7 24.6 214 166-413 14-231 (236)
143 PRK11607 potG putrescine trans 100.0 7.5E-36 1.6E-40 354.1 27.7 214 855-1093 19-234 (377)
144 PRK11000 maltose/maltodextrin 100.0 4.8E-36 1E-40 356.3 26.1 214 855-1093 3-218 (369)
145 COG4559 ABC-type hemin transpo 100.0 1.6E-36 3.5E-41 312.9 18.9 206 166-413 15-229 (259)
146 cd03258 ABC_MetN_methionine_tr 100.0 5.3E-36 1.1E-40 336.4 24.8 205 166-413 19-229 (233)
147 COG4988 CydD ABC-type transpor 100.0 2.2E-36 4.7E-41 357.4 22.6 255 79-414 285-543 (559)
148 cd03301 ABC_MalK_N The N-termi 100.0 5.4E-36 1.2E-40 331.7 24.3 199 166-407 14-213 (213)
149 COG4987 CydC ABC-type transpor 100.0 5.2E-37 1.1E-41 355.9 16.8 257 77-414 302-561 (573)
150 PRK13643 cbiO cobalt transport 100.0 6.8E-36 1.5E-40 344.9 26.1 224 166-433 20-255 (288)
151 cd03234 ABCG_White The White s 100.0 8.3E-36 1.8E-40 333.1 25.9 221 856-1091 4-226 (226)
152 TIGR01186 proV glycine betaine 100.0 4.4E-36 9.5E-41 352.9 24.8 202 880-1093 5-214 (363)
153 TIGR03522 GldA_ABC_ATP gliding 100.0 6.3E-36 1.4E-40 347.4 25.8 212 856-1093 3-216 (301)
154 PRK09536 btuD corrinoid ABC tr 100.0 4.4E-36 9.5E-41 357.0 25.0 217 855-1093 3-223 (402)
155 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.1E-36 4.7E-41 390.6 23.9 253 78-414 418-673 (686)
156 cd03268 ABC_BcrA_bacitracin_re 100.0 5.1E-36 1.1E-40 330.6 23.4 206 857-1091 2-208 (208)
157 TIGR00960 3a0501s02 Type II (G 100.0 3.6E-36 7.7E-41 333.8 22.2 194 166-403 17-216 (216)
158 cd03260 ABC_PstB_phosphate_tra 100.0 5.7E-36 1.2E-40 334.8 23.7 213 857-1093 2-224 (227)
159 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.8E-36 1.7E-40 332.0 24.6 200 165-409 17-218 (220)
160 TIGR03522 GldA_ABC_ATP gliding 100.0 9.4E-36 2E-40 345.9 26.2 205 165-414 15-221 (301)
161 cd03218 ABC_YhbG The ABC trans 100.0 8.2E-36 1.8E-40 334.7 24.7 204 166-413 14-221 (232)
162 cd03258 ABC_MetN_methionine_tr 100.0 7.7E-36 1.7E-40 335.1 24.3 217 856-1093 2-225 (233)
163 COG1137 YhbG ABC-type (unclass 100.0 3.8E-37 8.3E-42 314.8 12.3 210 163-414 15-228 (243)
164 cd03256 ABC_PhnC_transporter A 100.0 6.8E-36 1.5E-40 337.4 23.6 216 857-1093 2-229 (241)
165 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.2E-36 1.6E-40 331.9 23.3 207 857-1084 2-216 (218)
166 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-35 2.8E-40 334.7 25.6 214 856-1093 2-220 (240)
167 PRK11629 lolD lipoprotein tran 100.0 1.9E-35 4E-40 331.8 26.5 217 855-1093 5-229 (233)
168 PRK13650 cbiO cobalt transport 100.0 1.4E-35 3E-40 341.0 26.0 204 166-413 21-228 (279)
169 PRK13637 cbiO cobalt transport 100.0 1.2E-35 2.5E-40 342.9 25.3 218 856-1093 3-229 (287)
170 TIGR02673 FtsE cell division A 100.0 9.2E-36 2E-40 330.1 23.6 206 856-1084 2-213 (214)
171 cd03226 ABC_cobalt_CbiO_domain 100.0 5E-36 1.1E-40 329.8 21.2 192 881-1088 13-205 (205)
172 cd03263 ABC_subfamily_A The AB 100.0 8.6E-36 1.9E-40 331.8 23.3 203 165-412 15-219 (220)
173 PRK11264 putative amino-acid A 100.0 1.6E-35 3.5E-40 336.1 25.6 214 856-1093 4-228 (250)
174 PRK13647 cbiO cobalt transport 100.0 1.8E-35 3.8E-40 339.3 26.2 203 166-412 19-225 (274)
175 cd03263 ABC_subfamily_A The AB 100.0 1.2E-35 2.6E-40 330.6 24.0 213 857-1093 2-216 (220)
176 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-35 2.3E-40 331.5 23.6 202 166-413 14-220 (222)
177 PRK11831 putative ABC transpor 100.0 1.9E-35 4.1E-40 338.5 26.2 206 166-413 21-232 (269)
178 cd03256 ABC_PhnC_transporter A 100.0 1.3E-35 2.9E-40 335.0 24.4 214 165-413 14-233 (241)
179 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-35 2.7E-40 353.2 25.3 208 166-413 17-227 (402)
180 cd03260 ABC_PstB_phosphate_tra 100.0 7.6E-36 1.7E-40 333.7 22.2 203 166-411 14-226 (227)
181 cd03269 ABC_putative_ATPase Th 100.0 1.1E-35 2.5E-40 328.3 23.2 197 166-407 14-210 (210)
182 cd03292 ABC_FtsE_transporter F 100.0 1.2E-35 2.7E-40 329.1 23.5 205 857-1084 2-212 (214)
183 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-35 3.2E-40 334.5 24.5 213 857-1093 2-220 (242)
184 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.7E-35 3.7E-40 334.0 25.0 206 165-413 14-224 (242)
185 PRK13631 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 345.0 25.5 217 165-425 39-279 (320)
186 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.4E-35 3.1E-40 339.3 24.3 208 163-413 35-249 (269)
187 PRK13651 cobalt transporter AT 100.0 1.5E-35 3.2E-40 343.5 24.6 205 165-413 20-253 (305)
188 TIGR03375 type_I_sec_LssB type 100.0 4.5E-36 9.7E-41 388.1 22.6 258 78-414 428-688 (694)
189 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.7E-36 2.1E-40 330.8 22.1 195 165-403 17-218 (218)
190 PRK13647 cbiO cobalt transport 100.0 1.8E-35 3.8E-40 339.3 24.9 215 855-1093 4-222 (274)
191 PRK11629 lolD lipoprotein tran 100.0 2.8E-35 6E-40 330.4 25.8 201 165-409 22-229 (233)
192 cd03224 ABC_TM1139_LivF_branch 100.0 1.4E-35 2.9E-40 330.7 23.1 210 857-1093 2-216 (222)
193 PRK15079 oligopeptide ABC tran 100.0 2.2E-35 4.7E-40 345.3 25.9 208 165-413 34-250 (331)
194 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.2E-35 7E-40 330.5 26.1 205 166-414 15-221 (236)
195 TIGR02315 ABC_phnC phosphonate 100.0 1E-35 2.2E-40 336.4 22.0 217 856-1093 2-230 (243)
196 PRK11248 tauB taurine transpor 100.0 2.9E-35 6.3E-40 333.9 25.8 212 856-1093 2-215 (255)
197 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.8E-35 3.9E-40 338.4 24.2 203 879-1093 35-245 (269)
198 PRK10790 putative multidrug tr 100.0 1.4E-35 3.1E-40 377.2 26.0 253 78-414 308-563 (592)
199 PRK13634 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 341.6 24.4 218 856-1093 3-230 (290)
200 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4E-36 8.7E-41 389.8 21.0 261 78-414 436-700 (710)
201 PRK13646 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 340.6 24.9 206 165-413 20-234 (286)
202 PRK11831 putative ABC transpor 100.0 3.1E-35 6.8E-40 336.7 25.9 215 855-1093 7-228 (269)
203 COG4618 ArpD ABC-type protease 100.0 4.8E-36 1E-40 344.2 18.8 256 80-416 304-562 (580)
204 TIGR01193 bacteriocin_ABC ABC- 100.0 5.3E-36 1.1E-40 388.3 21.7 257 78-414 438-697 (708)
205 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-35 3.4E-40 334.9 22.8 212 166-412 16-233 (243)
206 PTZ00265 multidrug resistance 100.0 3.4E-36 7.4E-41 408.4 20.7 263 78-414 1126-1452(1466)
207 PRK11160 cysteine/glutathione 100.0 7.9E-36 1.7E-40 376.8 22.6 256 78-414 304-562 (574)
208 cd03264 ABC_drug_resistance_li 100.0 2.3E-35 5E-40 326.1 23.6 208 857-1091 2-211 (211)
209 cd03268 ABC_BcrA_bacitracin_re 100.0 1.9E-35 4.2E-40 325.9 22.9 194 166-407 14-208 (208)
210 PRK13643 cbiO cobalt transport 100.0 2.6E-35 5.7E-40 340.1 25.0 218 856-1093 2-228 (288)
211 PRK09473 oppD oligopeptide tra 100.0 3.6E-35 7.7E-40 343.7 26.3 214 165-414 29-251 (330)
212 PRK13651 cobalt transporter AT 100.0 2.4E-35 5.3E-40 341.7 24.6 218 856-1093 3-249 (305)
213 PRK11176 lipid transporter ATP 100.0 8.4E-36 1.8E-40 379.0 22.6 257 78-414 308-567 (582)
214 cd03266 ABC_NatA_sodium_export 100.0 2.2E-35 4.8E-40 328.0 23.1 198 166-407 19-218 (218)
215 PRK13635 cbiO cobalt transport 100.0 3.4E-35 7.3E-40 337.6 25.2 215 166-424 21-242 (279)
216 PRK10908 cell division protein 100.0 3.7E-35 7.9E-40 327.0 24.7 208 856-1087 2-215 (222)
217 PRK09493 glnQ glutamine ABC tr 100.0 3.9E-35 8.5E-40 330.8 25.1 204 166-413 15-224 (240)
218 COG4559 ABC-type hemin transpo 100.0 1E-35 2.2E-40 307.0 18.4 216 856-1094 2-226 (259)
219 PRK13631 cbiO cobalt transport 100.0 2.9E-35 6.2E-40 343.1 24.8 218 855-1093 21-260 (320)
220 PRK10619 histidine/lysine/argi 100.0 5E-35 1.1E-39 333.2 26.2 214 855-1093 5-236 (257)
221 COG0410 LivF ABC-type branched 100.0 1.5E-35 3.3E-40 313.4 20.2 212 856-1093 4-221 (237)
222 TIGR00958 3a01208 Conjugate Tr 100.0 7.9E-36 1.7E-40 385.0 22.0 256 78-414 444-702 (711)
223 COG0444 DppD ABC-type dipeptid 100.0 3.1E-35 6.8E-40 327.0 23.7 215 164-413 17-242 (316)
224 PRK10070 glycine betaine trans 100.0 2.7E-35 5.8E-40 350.1 24.7 207 164-413 40-253 (400)
225 PRK13636 cbiO cobalt transport 100.0 3.7E-35 8.1E-40 338.2 25.2 215 855-1093 5-226 (283)
226 PRK10895 lipopolysaccharide AB 100.0 3.3E-35 7.1E-40 331.6 24.2 214 856-1093 4-221 (241)
227 PRK11264 putative amino-acid A 100.0 3.8E-35 8.2E-40 333.1 24.8 204 166-413 17-232 (250)
228 COG4175 ProV ABC-type proline/ 100.0 7.2E-36 1.6E-40 324.6 17.6 223 163-436 39-268 (386)
229 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-35 8E-40 328.6 24.1 217 856-1091 2-228 (228)
230 cd03226 ABC_cobalt_CbiO_domain 100.0 1.6E-35 3.6E-40 325.7 20.8 192 165-404 13-205 (205)
231 cd03233 ABC_PDR_domain1 The pl 100.0 3.2E-35 7E-40 322.1 22.9 195 118-407 3-202 (202)
232 cd03262 ABC_HisP_GlnQ_permease 100.0 3.3E-35 7.3E-40 325.4 23.3 206 857-1086 2-212 (213)
233 COG4152 ABC-type uncharacteriz 100.0 9.9E-36 2.1E-40 313.0 17.9 202 879-1093 13-214 (300)
234 cd03235 ABC_Metallic_Cations A 100.0 2.1E-35 4.5E-40 327.0 21.4 199 881-1091 12-213 (213)
235 TIGR00972 3a0107s01c2 phosphat 100.0 6.2E-35 1.3E-39 330.5 25.7 214 856-1093 2-227 (247)
236 cd03264 ABC_drug_resistance_li 100.0 3.1E-35 6.7E-40 325.1 22.6 196 166-407 14-211 (211)
237 TIGR03415 ABC_choXWV_ATP choli 100.0 3.5E-35 7.6E-40 346.6 24.4 208 163-413 35-253 (382)
238 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.2E-35 1.6E-39 327.7 25.9 212 856-1093 2-216 (236)
239 PRK13646 cbiO cobalt transport 100.0 3.9E-35 8.4E-40 338.6 24.3 217 856-1093 3-230 (286)
240 PRK13636 cbiO cobalt transport 100.0 5E-35 1.1E-39 337.1 25.0 206 166-414 20-231 (283)
241 cd03234 ABCG_White The White s 100.0 4.5E-35 9.7E-40 327.2 23.9 202 165-407 20-226 (226)
242 TIGR03740 galliderm_ABC gallid 100.0 7.9E-35 1.7E-39 324.6 25.6 208 857-1094 2-209 (223)
243 PRK11247 ssuB aliphatic sulfon 100.0 4.9E-35 1.1E-39 331.5 24.2 206 855-1093 12-218 (257)
244 PRK11248 tauB taurine transpor 100.0 7.4E-35 1.6E-39 330.6 25.3 200 166-410 15-216 (255)
245 cd03225 ABC_cobalt_CbiO_domain 100.0 3.4E-35 7.4E-40 324.7 21.9 193 881-1084 14-210 (211)
246 COG0411 LivG ABC-type branched 100.0 2.1E-35 4.6E-40 314.6 19.3 206 879-1093 15-234 (250)
247 PRK11247 ssuB aliphatic sulfon 100.0 5.1E-35 1.1E-39 331.4 23.7 194 166-410 26-219 (257)
248 PRK11022 dppD dipeptide transp 100.0 6.3E-35 1.4E-39 341.4 25.2 214 165-414 20-243 (326)
249 cd03257 ABC_NikE_OppD_transpor 100.0 6.5E-35 1.4E-39 326.6 24.3 201 166-407 19-228 (228)
250 TIGR02211 LolD_lipo_ex lipopro 100.0 7.3E-35 1.6E-39 324.5 24.5 211 856-1088 2-220 (221)
251 PRK13650 cbiO cobalt transport 100.0 4.8E-35 1E-39 336.6 23.7 216 855-1093 4-224 (279)
252 PRK11614 livF leucine/isoleuci 100.0 5.2E-35 1.1E-39 329.1 23.5 212 855-1093 5-221 (237)
253 PRK15079 oligopeptide ABC tran 100.0 8.8E-35 1.9E-39 340.2 26.1 229 855-1093 8-246 (331)
254 PRK14247 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 328.7 26.4 216 856-1093 4-229 (250)
255 TIGR03005 ectoine_ehuA ectoine 100.0 9.2E-35 2E-39 330.1 25.3 214 856-1093 1-231 (252)
256 PRK11308 dppF dipeptide transp 100.0 9.3E-35 2E-39 339.8 25.9 208 165-414 28-244 (327)
257 PRK13644 cbiO cobalt transport 100.0 6.3E-35 1.4E-39 334.7 23.9 213 856-1093 2-219 (274)
258 TIGR02211 LolD_lipo_ex lipopro 100.0 6.9E-35 1.5E-39 324.7 23.5 196 165-404 18-220 (221)
259 PRK11300 livG leucine/isoleuci 100.0 8.7E-35 1.9E-39 331.1 24.9 217 855-1093 5-238 (255)
260 TIGR03410 urea_trans_UrtE urea 100.0 6.5E-35 1.4E-39 326.9 23.4 201 166-412 14-219 (230)
261 PRK13641 cbiO cobalt transport 100.0 8.5E-35 1.8E-39 335.9 25.0 219 855-1093 2-229 (287)
262 PRK10895 lipopolysaccharide AB 100.0 7.7E-35 1.7E-39 328.6 24.0 205 166-413 17-225 (241)
263 PRK11124 artP arginine transpo 100.0 1E-34 2.2E-39 327.8 25.0 213 856-1093 3-225 (242)
264 TIGR01978 sufC FeS assembly AT 100.0 1.2E-34 2.6E-39 327.6 25.4 218 857-1093 2-229 (243)
265 cd03267 ABC_NatA_like Similar 100.0 8.3E-35 1.8E-39 326.8 23.9 233 119-407 1-236 (236)
266 PRK13652 cbiO cobalt transport 100.0 1E-34 2.2E-39 333.7 25.2 214 856-1093 4-222 (277)
267 PRK14267 phosphate ABC transpo 100.0 1.4E-34 3E-39 329.0 26.0 221 855-1093 4-232 (253)
268 PRK13632 cbiO cobalt transport 100.0 8E-35 1.7E-39 333.7 24.2 204 166-413 23-230 (271)
269 PRK13641 cbiO cobalt transport 100.0 7.9E-35 1.7E-39 336.1 24.1 205 165-413 20-233 (287)
270 TIGR03005 ectoine_ehuA ectoine 100.0 9.5E-35 2.1E-39 330.0 24.4 205 166-413 14-235 (252)
271 PRK11614 livF leucine/isoleuci 100.0 8E-35 1.7E-39 327.6 23.5 202 166-413 19-225 (237)
272 cd03292 ABC_FtsE_transporter F 100.0 6.6E-35 1.4E-39 323.2 22.4 194 166-403 15-214 (214)
273 PRK14273 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 328.8 25.8 215 855-1093 7-233 (254)
274 PRK13633 cobalt transporter AT 100.0 1.1E-34 2.4E-39 333.9 25.0 206 165-414 23-233 (280)
275 TIGR02673 FtsE cell division A 100.0 8.3E-35 1.8E-39 322.4 22.9 193 166-402 16-214 (214)
276 KOG0057 Mitochondrial Fe/S clu 100.0 2.5E-35 5.3E-40 342.0 19.3 212 852-1093 348-569 (591)
277 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-34 3.1E-39 327.6 25.2 206 166-413 15-231 (247)
278 PRK14268 phosphate ABC transpo 100.0 1.7E-34 3.8E-39 328.8 26.1 214 855-1093 12-237 (258)
279 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.4E-33 7.5E-38 360.8 41.4 209 854-1093 450-668 (686)
280 PRK13548 hmuV hemin importer A 100.0 1.3E-34 2.9E-39 329.5 24.9 205 166-413 16-229 (258)
281 PRK13548 hmuV hemin importer A 100.0 1.3E-34 2.8E-39 329.6 24.7 213 856-1093 3-225 (258)
282 PRK13652 cbiO cobalt transport 100.0 1.4E-34 3E-39 332.6 25.2 205 166-413 18-226 (277)
283 TIGR03411 urea_trans_UrtD urea 100.0 1.6E-34 3.4E-39 326.4 25.0 215 856-1093 3-226 (242)
284 cd03298 ABC_ThiQ_thiamine_tran 100.0 1E-34 2.2E-39 321.0 22.9 194 886-1091 16-211 (211)
285 PRK13644 cbiO cobalt transport 100.0 1.1E-34 2.5E-39 332.6 24.0 203 166-413 16-223 (274)
286 PRK13635 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 333.4 23.9 215 855-1093 5-224 (279)
287 PRK14273 phosphate ABC transpo 100.0 1.7E-34 3.7E-39 328.3 25.2 206 166-413 21-237 (254)
288 PRK13648 cbiO cobalt transport 100.0 1.7E-34 3.8E-39 330.7 25.3 204 166-413 23-230 (269)
289 COG4525 TauB ABC-type taurine 100.0 8.6E-35 1.9E-39 295.6 19.9 205 165-414 18-224 (259)
290 TIGR03411 urea_trans_UrtD urea 100.0 1.9E-34 4.1E-39 325.7 25.1 211 166-413 16-230 (242)
291 cd03233 ABC_PDR_domain1 The pl 100.0 1.9E-34 4.2E-39 315.9 24.3 196 855-1091 3-202 (202)
292 PRK11231 fecE iron-dicitrate t 100.0 1.4E-34 3E-39 329.2 23.9 216 856-1094 3-223 (255)
293 PRK11300 livG leucine/isoleuci 100.0 2.2E-34 4.8E-39 327.7 25.5 220 166-413 19-242 (255)
294 PRK13649 cbiO cobalt transport 100.0 2.7E-34 5.9E-39 331.2 26.5 204 166-413 21-233 (280)
295 PRK14241 phosphate transporter 100.0 2.7E-34 5.8E-39 327.4 26.1 217 855-1093 4-237 (258)
296 PRK13638 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 331.5 24.2 213 856-1093 2-220 (271)
297 PRK14245 phosphate ABC transpo 100.0 3.1E-34 6.6E-39 325.5 26.3 219 855-1093 3-229 (250)
298 PRK14250 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 325.3 24.2 200 166-413 17-220 (241)
299 PRK14268 phosphate ABC transpo 100.0 2.8E-34 6E-39 327.2 26.0 209 166-413 26-241 (258)
300 PRK14242 phosphate transporter 100.0 2.9E-34 6.3E-39 326.3 26.2 220 854-1093 5-232 (253)
301 PRK10619 histidine/lysine/argi 100.0 2.1E-34 4.5E-39 328.1 25.0 204 166-413 19-240 (257)
302 PRK10253 iron-enterobactin tra 100.0 1.6E-34 3.4E-39 330.3 24.0 218 855-1094 7-229 (265)
303 TIGR02769 nickel_nikE nickel i 100.0 2.4E-34 5.1E-39 328.9 25.5 206 165-413 24-239 (265)
304 PRK10908 cell division protein 100.0 1.9E-34 4.1E-39 321.3 24.0 195 166-404 16-216 (222)
305 cd03232 ABC_PDR_domain2 The pl 100.0 1.9E-34 4.2E-39 313.5 23.4 190 855-1091 3-192 (192)
306 PRK10744 pstB phosphate transp 100.0 2.9E-34 6.3E-39 327.4 25.9 219 851-1093 9-239 (260)
307 PRK10575 iron-hydroxamate tran 100.0 2E-34 4.3E-39 329.5 24.6 217 855-1093 11-232 (265)
308 TIGR01842 type_I_sec_PrtD type 100.0 9.2E-35 2E-39 365.7 23.9 256 78-414 284-542 (544)
309 TIGR02769 nickel_nikE nickel i 100.0 2.7E-34 5.8E-39 328.4 25.5 223 856-1093 3-235 (265)
310 PRK14257 phosphate ABC transpo 100.0 2.4E-34 5.3E-39 336.2 25.6 210 166-413 96-312 (329)
311 cd03300 ABC_PotA_N PotA is an 100.0 3.4E-34 7.4E-39 321.3 25.7 205 166-413 14-219 (232)
312 PRK13640 cbiO cobalt transport 100.0 2.4E-34 5.3E-39 331.2 25.1 208 166-414 21-232 (282)
313 PRK10584 putative ABC transpor 100.0 2.6E-34 5.7E-39 321.6 24.6 197 166-406 24-227 (228)
314 PRK10584 putative ABC transpor 100.0 3.9E-34 8.4E-39 320.2 26.0 213 855-1089 6-226 (228)
315 PRK15093 antimicrobial peptide 100.0 2.6E-34 5.6E-39 337.4 25.7 217 165-413 20-247 (330)
316 COG4988 CydD ABC-type transpor 100.0 6.4E-35 1.4E-39 345.0 20.6 213 852-1093 317-538 (559)
317 PRK13638 cbiO cobalt transport 100.0 3E-34 6.6E-39 329.1 25.7 204 166-413 15-224 (271)
318 PRK10070 glycine betaine trans 100.0 1.6E-34 3.4E-39 343.5 24.1 201 881-1093 41-249 (400)
319 PRK13639 cbiO cobalt transport 100.0 4.1E-34 8.8E-39 328.4 26.7 204 166-413 16-225 (275)
320 PRK13639 cbiO cobalt transport 100.0 2.6E-34 5.5E-39 330.0 25.0 214 856-1093 2-221 (275)
321 PRK13649 cbiO cobalt transport 100.0 2.5E-34 5.3E-39 331.6 25.0 217 856-1093 3-229 (280)
322 PRK11124 artP arginine transpo 100.0 2.2E-34 4.7E-39 325.1 24.0 203 166-412 16-228 (242)
323 COG5265 ATM1 ABC-type transpor 100.0 1.6E-35 3.4E-40 332.8 14.5 252 83-414 231-486 (497)
324 cd03300 ABC_PotA_N PotA is an 100.0 3.5E-34 7.5E-39 321.2 25.3 212 857-1093 2-215 (232)
325 PRK14247 phosphate ABC transpo 100.0 3.6E-34 7.9E-39 325.0 25.7 212 166-413 17-233 (250)
326 PRK09984 phosphonate/organopho 100.0 2.6E-34 5.6E-39 328.3 24.5 220 855-1094 4-238 (262)
327 TIGR03873 F420-0_ABC_ATP propo 100.0 2.3E-34 5E-39 327.5 23.8 216 856-1093 2-221 (256)
328 TIGR03410 urea_trans_UrtE urea 100.0 2.4E-34 5.2E-39 322.4 23.3 210 857-1094 2-217 (230)
329 KOG0066 eIF2-interacting prote 100.0 4.6E-34 1E-38 317.7 25.2 201 853-1093 584-786 (807)
330 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.3E-34 4.9E-39 318.2 22.8 195 170-407 16-211 (211)
331 PRK14237 phosphate transporter 100.0 5.9E-34 1.3E-38 325.8 27.0 225 849-1093 14-246 (267)
332 TIGR01184 ntrCD nitrate transp 100.0 1.7E-34 3.8E-39 322.9 22.1 198 884-1093 1-199 (230)
333 PRK13645 cbiO cobalt transport 100.0 2.6E-34 5.6E-39 332.6 24.2 205 166-413 25-239 (289)
334 PRK14235 phosphate transporter 100.0 4.5E-34 9.7E-39 326.8 25.8 220 855-1093 19-246 (267)
335 TIGR03740 galliderm_ABC gallid 100.0 3.4E-34 7.4E-39 319.4 24.1 196 166-410 14-209 (223)
336 PRK10253 iron-enterobactin tra 100.0 3.3E-34 7.1E-39 327.7 24.4 208 166-413 21-232 (265)
337 PRK10575 iron-hydroxamate tran 100.0 3.1E-34 6.6E-39 328.0 24.1 209 166-413 25-236 (265)
338 PRK14256 phosphate ABC transpo 100.0 8.9E-34 1.9E-38 322.1 27.7 220 855-1093 4-231 (252)
339 PRK14267 phosphate ABC transpo 100.0 4.4E-34 9.6E-39 324.8 25.2 212 166-413 18-236 (253)
340 TIGR01277 thiQ thiamine ABC tr 100.0 3.4E-34 7.3E-39 317.1 23.6 198 883-1092 13-212 (213)
341 PRK11308 dppF dipeptide transp 100.0 5.3E-34 1.2E-38 333.4 26.5 225 855-1093 5-239 (327)
342 PRK11022 dppD dipeptide transp 100.0 6.5E-34 1.4E-38 332.9 27.1 223 856-1093 4-238 (326)
343 PRK13632 cbiO cobalt transport 100.0 3.7E-34 8E-39 328.2 24.4 215 855-1093 7-226 (271)
344 TIGR01978 sufC FeS assembly AT 100.0 4.2E-34 9.2E-39 323.2 24.4 212 166-413 14-233 (243)
345 PRK10771 thiQ thiamine transpo 100.0 3.9E-34 8.5E-39 320.9 23.9 201 170-413 17-218 (232)
346 TIGR03415 ABC_choXWV_ATP choli 100.0 3.2E-34 7E-39 338.4 24.3 203 879-1093 35-249 (382)
347 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-34 4.8E-39 318.3 21.5 194 165-402 14-211 (211)
348 PRK14242 phosphate transporter 100.0 6E-34 1.3E-38 323.8 25.7 207 166-413 20-236 (253)
349 TIGR00968 3a0106s01 sulfate AB 100.0 5.3E-34 1.1E-38 320.7 24.9 212 857-1093 2-215 (237)
350 cd03299 ABC_ModC_like Archeal 100.0 5.1E-34 1.1E-38 320.4 24.8 204 167-413 14-218 (235)
351 TIGR01846 type_I_sec_HlyB type 100.0 1.1E-34 2.5E-39 374.7 22.3 257 78-414 421-680 (694)
352 TIGR00968 3a0106s01 sulfate AB 100.0 5.6E-34 1.2E-38 320.5 24.9 205 166-413 14-219 (237)
353 PRK09473 oppD oligopeptide tra 100.0 6.2E-34 1.3E-38 333.3 26.3 224 855-1093 12-246 (330)
354 PRK14269 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 322.4 25.1 219 856-1093 3-225 (246)
355 PRK13648 cbiO cobalt transport 100.0 5.4E-34 1.2E-38 326.6 25.2 215 855-1093 7-226 (269)
356 PRK11144 modC molybdate transp 100.0 2E-34 4.3E-39 341.1 22.2 195 170-413 16-217 (352)
357 PRK10789 putative multidrug tr 100.0 1.6E-34 3.4E-39 365.0 22.7 256 78-414 280-538 (569)
358 TIGR01193 bacteriocin_ABC ABC- 100.0 9.1E-33 2E-37 358.1 39.6 211 854-1093 472-692 (708)
359 PRK13633 cobalt transporter AT 100.0 4E-34 8.8E-39 329.3 24.0 219 855-1093 4-228 (280)
360 PRK13549 xylose transporter AT 100.0 3.5E-34 7.6E-39 357.0 25.4 221 855-1095 5-229 (506)
361 PRK11231 fecE iron-dicitrate t 100.0 3.7E-34 8.1E-39 325.6 23.4 208 166-413 16-226 (255)
362 PRK13547 hmuV hemin importer A 100.0 4.3E-34 9.4E-39 326.5 23.9 219 856-1094 2-240 (272)
363 PRK13645 cbiO cobalt transport 100.0 4.7E-34 1E-38 330.4 24.4 219 855-1093 6-235 (289)
364 PRK09984 phosphonate/organopho 100.0 4.5E-34 9.7E-39 326.3 23.9 215 166-412 18-240 (262)
365 TIGR03873 F420-0_ABC_ATP propo 100.0 4.9E-34 1.1E-38 324.8 24.1 207 166-412 15-224 (256)
366 COG4525 TauB ABC-type taurine 100.0 2.5E-34 5.4E-39 292.2 19.1 201 881-1094 18-220 (259)
367 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.5E-32 3.2E-37 356.6 41.0 210 854-1093 476-695 (710)
368 PRK14235 phosphate transporter 100.0 8.5E-34 1.8E-38 324.5 26.0 208 166-413 33-250 (267)
369 cd03267 ABC_NatA_like Similar 100.0 5.2E-34 1.1E-38 320.4 23.8 200 880-1091 33-236 (236)
370 PRK10744 pstB phosphate transp 100.0 6.3E-34 1.4E-38 324.6 24.8 229 113-413 8-243 (260)
371 PRK14250 phosphate ABC transpo 100.0 4.4E-34 9.5E-39 322.2 23.1 209 855-1093 3-216 (241)
372 PRK13657 cyclic beta-1,2-gluca 100.0 2.6E-34 5.7E-39 365.1 23.8 207 166-414 349-558 (588)
373 PRK14259 phosphate ABC transpo 100.0 7.4E-34 1.6E-38 325.2 25.2 215 854-1093 12-248 (269)
374 TIGR02770 nickel_nikD nickel i 100.0 3.7E-34 8E-39 320.5 22.3 207 167-413 1-214 (230)
375 PRK13640 cbiO cobalt transport 100.0 4.7E-34 1E-38 328.9 23.7 217 855-1093 5-227 (282)
376 cd03262 ABC_HisP_GlnQ_permease 100.0 3.1E-34 6.7E-39 317.7 21.3 194 166-403 14-213 (213)
377 TIGR02203 MsbA_lipidA lipid A 100.0 1.7E-34 3.6E-39 366.7 21.8 257 78-414 297-556 (571)
378 PRK10771 thiQ thiamine transpo 100.0 4.7E-34 1E-38 320.2 22.9 211 856-1093 2-214 (232)
379 TIGR03608 L_ocin_972_ABC putat 100.0 4.7E-34 1E-38 314.5 22.5 189 881-1081 11-206 (206)
380 TIGR02142 modC_ABC molybdenum 100.0 4.3E-34 9.3E-39 338.8 23.8 199 170-413 15-220 (354)
381 PRK13642 cbiO cobalt transport 100.0 9.8E-34 2.1E-38 325.6 26.0 205 165-413 20-228 (277)
382 PRK15112 antimicrobial peptide 100.0 7.1E-34 1.5E-38 325.2 24.7 207 165-413 26-238 (267)
383 TIGR01277 thiQ thiamine ABC tr 100.0 6.2E-34 1.3E-38 315.0 23.3 199 167-408 13-212 (213)
384 PLN03130 ABC transporter C fam 100.0 1.7E-34 3.8E-39 395.4 23.2 257 78-414 1199-1461(1622)
385 cd03235 ABC_Metallic_Cations A 100.0 2.7E-34 5.9E-39 318.0 20.5 200 165-407 12-213 (213)
386 PRK14237 phosphate transporter 100.0 1.2E-33 2.5E-38 323.3 26.3 210 166-413 34-250 (267)
387 TIGR01184 ntrCD nitrate transp 100.0 3.5E-34 7.6E-39 320.5 21.4 202 168-412 1-202 (230)
388 PRK14257 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 330.6 26.6 221 854-1093 79-308 (329)
389 cd03299 ABC_ModC_like Archeal 100.0 9E-34 2E-38 318.4 24.7 199 883-1093 14-214 (235)
390 cd03213 ABCG_EPDR ABCG transpo 100.0 8.8E-34 1.9E-38 308.7 23.7 190 855-1091 3-194 (194)
391 TIGR01192 chvA glucan exporter 100.0 3.2E-34 6.9E-39 362.7 23.4 257 78-414 299-558 (585)
392 PRK14239 phosphate transporter 100.0 1.2E-33 2.5E-38 321.3 25.7 219 855-1093 5-231 (252)
393 PRK15093 antimicrobial peptide 100.0 1.3E-33 2.7E-38 331.6 26.4 222 856-1093 4-243 (330)
394 PRK14270 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 320.4 25.7 215 855-1093 4-230 (251)
395 PRK14244 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 320.9 25.2 219 856-1093 6-232 (251)
396 PRK14245 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 320.6 25.2 209 166-413 17-233 (250)
397 COG0444 DppD ABC-type dipeptid 100.0 1.2E-33 2.6E-38 314.4 24.5 224 856-1093 2-238 (316)
398 PRK14274 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 321.9 25.6 219 855-1093 12-238 (259)
399 PRK14240 phosphate transporter 100.0 1.5E-33 3.3E-38 319.9 25.8 215 855-1093 3-229 (250)
400 PRK14241 phosphate transporter 100.0 1.2E-33 2.6E-38 322.0 25.0 211 166-413 18-241 (258)
401 PRK11701 phnK phosphonate C-P 100.0 1.3E-33 2.9E-38 321.7 25.4 206 166-413 20-240 (258)
402 PRK14262 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 320.0 25.6 218 856-1093 4-229 (250)
403 PRK15112 antimicrobial peptide 100.0 8.5E-34 1.8E-38 324.5 23.8 223 856-1093 5-234 (267)
404 PRK14270 phosphate ABC transpo 100.0 1.6E-33 3.6E-38 319.7 26.0 210 166-413 18-234 (251)
405 PRK14258 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 321.1 25.8 221 855-1093 7-240 (261)
406 PRK00635 excinuclease ABC subu 100.0 3.2E-32 6.9E-37 361.9 41.8 134 952-1093 759-901 (1809)
407 cd03297 ABC_ModC_molybdenum_tr 100.0 1.1E-33 2.4E-38 313.4 23.5 191 886-1091 16-214 (214)
408 TIGR02142 modC_ABC molybdenum 100.0 9.8E-34 2.1E-38 335.7 24.6 194 886-1093 15-216 (354)
409 PRK00349 uvrA excinuclease ABC 100.0 1.7E-32 3.7E-37 352.6 37.9 122 956-1093 792-922 (943)
410 PRK14256 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 319.7 25.6 211 166-413 18-235 (252)
411 PRK14260 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 320.9 25.6 216 855-1093 7-238 (259)
412 PRK11144 modC molybdate transp 100.0 1E-33 2.2E-38 335.0 24.6 190 886-1093 16-213 (352)
413 PRK14253 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 319.3 25.3 219 855-1093 3-228 (249)
414 PRK14269 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 318.7 25.0 208 166-413 16-229 (246)
415 PLN03232 ABC transporter C fam 100.0 2.5E-34 5.5E-39 394.2 22.3 259 78-414 1196-1458(1495)
416 PRK10418 nikD nickel transport 100.0 2E-33 4.4E-38 319.3 25.9 205 167-413 18-229 (254)
417 PRK14274 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 321.2 25.2 210 166-413 26-242 (259)
418 PRK11174 cysteine/glutathione 100.0 4.8E-34 1E-38 363.2 23.1 210 854-1093 348-567 (588)
419 PRK14236 phosphate transporter 100.0 2.5E-33 5.4E-38 321.5 26.5 220 854-1093 24-251 (272)
420 PRK13642 cbiO cobalt transport 100.0 1.5E-33 3.2E-38 324.1 24.2 216 855-1093 4-224 (277)
421 PRK14272 phosphate ABC transpo 100.0 3E-33 6.5E-38 317.9 26.4 216 855-1093 4-231 (252)
422 TIGR02770 nickel_nikD nickel i 100.0 1E-33 2.3E-38 316.9 22.2 201 883-1093 1-210 (230)
423 COG1245 Predicted ATPase, RNas 100.0 8.2E-33 1.8E-37 312.3 29.3 173 884-1082 357-530 (591)
424 PRK14262 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 318.6 25.0 210 166-413 17-233 (250)
425 COG4181 Predicted ABC-type tra 100.0 6.8E-34 1.5E-38 283.3 18.1 198 879-1089 21-226 (228)
426 PRK14259 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 322.3 24.0 206 166-414 27-253 (269)
427 PRK10418 nikD nickel transport 100.0 2.7E-33 5.7E-38 318.3 25.5 213 855-1093 4-225 (254)
428 PRK14239 phosphate transporter 100.0 3E-33 6.4E-38 318.0 25.7 210 166-413 19-235 (252)
429 PRK10762 D-ribose transporter 100.0 1.4E-33 3E-38 351.3 25.1 218 856-1095 5-227 (501)
430 TIGR02982 heterocyst_DevA ABC 100.0 2.1E-33 4.5E-38 312.4 23.9 211 856-1087 2-219 (220)
431 PRK11701 phnK phosphonate C-P 100.0 2.5E-33 5.4E-38 319.4 25.0 215 855-1093 6-236 (258)
432 TIGR01846 type_I_sec_HlyB type 100.0 4E-32 8.8E-37 351.0 39.4 213 853-1093 453-675 (694)
433 PRK14249 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 317.1 25.7 219 855-1093 4-230 (251)
434 PRK14240 phosphate transporter 100.0 3E-33 6.5E-38 317.4 25.2 210 166-413 17-233 (250)
435 PRK14248 phosphate ABC transpo 100.0 4.5E-33 9.7E-38 319.0 26.8 207 166-413 35-251 (268)
436 TIGR02204 MsbA_rel ABC transpo 100.0 5.8E-34 1.3E-38 361.9 21.5 259 78-414 301-563 (576)
437 PRK14263 phosphate ABC transpo 100.0 3.9E-33 8.4E-38 317.6 26.0 219 854-1093 7-240 (261)
438 PRK14261 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 317.5 25.5 219 855-1093 6-232 (253)
439 PRK09700 D-allose transporter 100.0 1.5E-33 3.3E-38 351.9 24.6 218 855-1094 5-230 (510)
440 PRK13547 hmuV hemin importer A 100.0 2.5E-33 5.5E-38 320.2 24.4 212 166-413 15-243 (272)
441 cd03252 ABCC_Hemolysin The ABC 100.0 1.3E-33 2.9E-38 317.8 21.6 206 165-414 15-225 (237)
442 PRK14275 phosphate ABC transpo 100.0 3.5E-33 7.6E-38 322.1 25.6 215 855-1093 39-265 (286)
443 PRK14248 phosphate ABC transpo 100.0 3.3E-33 7.2E-38 320.1 24.8 215 855-1093 21-247 (268)
444 PRK14271 phosphate ABC transpo 100.0 4.4E-33 9.6E-38 319.6 25.8 210 166-413 35-250 (276)
445 PRK14271 phosphate ABC transpo 100.0 4.8E-33 1E-37 319.3 26.0 219 855-1093 21-246 (276)
446 PRK15056 manganese/iron transp 100.0 2.8E-33 6.1E-38 321.1 23.9 218 855-1094 6-226 (272)
447 PRK13543 cytochrome c biogenes 100.0 3E-33 6.6E-38 309.5 23.2 201 855-1082 11-211 (214)
448 PRK14272 phosphate ABC transpo 100.0 5.2E-33 1.1E-37 315.9 25.8 207 166-413 18-235 (252)
449 PRK14255 phosphate ABC transpo 100.0 6.4E-33 1.4E-37 315.2 26.3 219 855-1093 5-231 (252)
450 PRK14244 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 315.7 25.4 211 166-413 19-236 (251)
451 PRK14251 phosphate ABC transpo 100.0 4.6E-33 9.9E-38 316.1 25.0 210 166-413 18-234 (251)
452 PRK14251 phosphate ABC transpo 100.0 5E-33 1.1E-37 315.8 25.3 215 855-1093 4-230 (251)
453 PRK13538 cytochrome c biogenes 100.0 2.7E-33 5.8E-38 307.7 22.2 199 856-1081 2-202 (204)
454 PRK14253 phosphate ABC transpo 100.0 3.9E-33 8.4E-38 316.3 24.3 209 166-412 17-231 (249)
455 PRK14275 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 320.0 26.3 207 166-413 53-269 (286)
456 COG1132 MdlB ABC-type multidru 100.0 5.4E-34 1.2E-38 360.7 19.1 212 853-1093 326-547 (567)
457 PRK14236 phosphate transporter 100.0 6.1E-33 1.3E-37 318.3 26.0 210 166-413 39-255 (272)
458 cd03213 ABCG_EPDR ABCG transpo 100.0 3.8E-33 8.3E-38 303.7 23.1 170 165-407 22-194 (194)
459 cd03231 ABC_CcmA_heme_exporter 100.0 2.3E-33 4.9E-38 307.5 21.3 195 857-1081 2-198 (201)
460 PRK14249 phosphate ABC transpo 100.0 6.4E-33 1.4E-37 314.8 25.8 210 166-413 18-234 (251)
461 PRK14265 phosphate ABC transpo 100.0 7.2E-33 1.6E-37 317.7 26.4 220 853-1093 18-253 (274)
462 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.9E-33 4.1E-38 320.6 21.4 198 166-414 18-225 (275)
463 PRK10419 nikE nickel transport 100.0 5E-33 1.1E-37 318.2 24.9 224 856-1094 4-237 (268)
464 PRK14261 phosphate ABC transpo 100.0 6.1E-33 1.3E-37 315.4 25.2 210 166-413 20-236 (253)
465 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.1E-33 4.6E-38 320.2 21.4 210 855-1093 2-220 (275)
466 TIGR02633 xylG D-xylose ABC tr 100.0 4E-33 8.6E-38 347.6 25.8 220 856-1095 2-227 (500)
467 TIGR00957 MRP_assoc_pro multi 100.0 9.9E-34 2.1E-38 388.9 22.3 257 78-414 1246-1508(1522)
468 COG4181 Predicted ABC-type tra 100.0 2.2E-33 4.9E-38 279.6 18.6 202 160-405 18-226 (228)
469 PRK14258 phosphate ABC transpo 100.0 7.3E-33 1.6E-37 315.9 25.7 212 166-413 21-244 (261)
470 PRK14260 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 316.7 24.5 210 166-413 21-242 (259)
471 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.5E-33 1.2E-37 309.4 24.0 192 879-1091 33-224 (224)
472 PRK10790 putative multidrug tr 100.0 1.9E-33 4E-38 357.8 23.0 210 854-1093 339-558 (592)
473 PRK14254 phosphate ABC transpo 100.0 7.7E-33 1.7E-37 318.9 26.0 213 855-1093 39-264 (285)
474 PRK11176 lipid transporter ATP 100.0 1.5E-33 3.2E-38 358.5 22.1 213 854-1093 340-562 (582)
475 COG4987 CydC ABC-type transpor 100.0 6.7E-34 1.5E-38 330.1 17.1 211 855-1093 336-556 (573)
476 TIGR02868 CydC thiol reductant 100.0 6.4E-34 1.4E-38 357.5 18.4 226 78-382 297-527 (529)
477 TIGR02323 CP_lyasePhnK phospho 100.0 7.3E-33 1.6E-37 314.9 25.3 206 166-413 17-237 (253)
478 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-33 2.6E-38 318.2 18.6 209 857-1093 2-220 (237)
479 PRK10419 nikE nickel transport 100.0 7E-33 1.5E-37 316.9 25.1 206 165-413 25-240 (268)
480 PRK15439 autoinducer 2 ABC tra 100.0 3.6E-33 7.7E-38 347.8 24.7 211 855-1094 11-225 (510)
481 COG1123 ATPase components of v 100.0 5.1E-33 1.1E-37 330.9 24.5 211 163-414 302-519 (539)
482 cd03297 ABC_ModC_molybdenum_tr 100.0 3.9E-33 8.4E-38 309.0 22.1 192 170-407 16-214 (214)
483 PRK11288 araG L-arabinose tran 100.0 4.7E-33 1E-37 346.5 25.1 217 855-1093 4-224 (501)
484 PRK14238 phosphate transporter 100.0 7.4E-33 1.6E-37 317.3 24.6 215 855-1093 24-250 (271)
485 CHL00131 ycf16 sulfate ABC tra 100.0 1.2E-32 2.6E-37 313.0 26.1 220 855-1093 7-236 (252)
486 PRK14238 phosphate transporter 100.0 8.5E-33 1.8E-37 316.8 25.0 207 166-413 38-254 (271)
487 TIGR02982 heterocyst_DevA ABC 100.0 6E-33 1.3E-37 308.7 23.1 196 165-403 18-219 (220)
488 PRK14243 phosphate transporter 100.0 7.8E-33 1.7E-37 316.0 24.5 218 855-1093 10-243 (264)
489 PRK10247 putative ABC transpor 100.0 4.1E-33 8.9E-38 310.9 21.7 198 166-410 21-223 (225)
490 TIGR00630 uvra excinuclease AB 100.0 8.8E-32 1.9E-36 345.5 36.8 123 955-1093 789-920 (924)
491 PRK11160 cysteine/glutathione 100.0 2.8E-33 6.1E-38 353.6 22.7 212 854-1093 337-557 (574)
492 PRK14255 phosphate ABC transpo 100.0 1.3E-32 2.8E-37 312.7 25.9 210 166-413 19-235 (252)
493 PRK14265 phosphate ABC transpo 100.0 8.1E-33 1.8E-37 317.3 24.5 231 109-413 11-257 (274)
494 cd03251 ABCC_MsbA MsbA is an e 100.0 5.1E-33 1.1E-37 312.5 22.3 205 166-414 16-225 (234)
495 COG4148 ModC ABC-type molybdat 100.0 6.2E-34 1.3E-38 304.4 14.0 196 170-414 16-218 (352)
496 TIGR02323 CP_lyasePhnK phospho 100.0 8.8E-33 1.9E-37 314.2 24.4 215 855-1093 3-233 (253)
497 PRK10247 putative ABC transpor 100.0 5.7E-33 1.2E-37 309.8 22.3 209 855-1091 7-220 (225)
498 COG4152 ABC-type uncharacteriz 100.0 1.8E-33 3.9E-38 295.9 16.9 209 163-416 13-221 (300)
499 PRK10261 glutathione transport 100.0 7.9E-33 1.7E-37 351.4 26.3 207 165-413 337-552 (623)
500 cd03230 ABC_DR_subfamily_A Thi 100.0 5.8E-33 1.3E-37 296.8 21.1 168 857-1084 2-171 (173)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-246 Score=2267.22 Aligned_cols=1271 Identities=53% Similarity=0.924 Sum_probs=1190.4
Q ss_pred cchhHhhhHHHHhhCCChhhhhhcccccC-CCCcccccccccchHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCC
Q 000612 36 EDDEEALKWAALEKLPTYNRLRKGILTTS-RGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL 114 (1391)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1391)
+||||+|||||+|||||++| +++.+. ++ ++|+.+++..++..+.++..+..++|+++++.+++++++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 44999999999999999999 555432 22 79999999999999999999999999999999999999998 88
Q ss_pred CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHH
Q 000612 115 PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTL 194 (1391)
Q Consensus 115 ~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 194 (1391)
|.++++++++.+++++..| ||+.|...+.++.++...+.. ++.+.+||+|+||.++||+|++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999998765 999999999999887766644 5566889999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcC
Q 000612 195 LLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAG 274 (1391)
Q Consensus 195 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1391)
|++|+|.++...+.+|+|+|||++.+++.+++.++|++|+|.|+|+|||||+|+|+++|++++.|++ +..|++++.
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999998877789999999999999999999999999999999999999999999999998876 445555431
Q ss_pred CCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCC
Q 000612 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGL 354 (1391)
Q Consensus 275 ~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgL 354 (1391)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHH
Q 000612 355 DSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQ 434 (1391)
Q Consensus 355 D~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1391)
|++|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|++||+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCCccccccccccccccccCcHHHHHHHHHHHHHH
Q 000612 435 EVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELL 514 (1391)
Q Consensus 435 ~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~ 514 (1391)
++++++++.++|..+..|+.+.+++|+++.|.+++.+.++..+++.++++.+.++.++..++|.++.|+|++.|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCC
Q 000612 515 LMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRF 594 (1391)
Q Consensus 515 ~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~ 594 (1391)
+++||.+++++++++.+++++++|++|+++.+ ++..+...+.|++||++++.+|+++++++++++++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999885 5566788899999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Q 000612 595 FPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFA 674 (1391)
Q Consensus 595 y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~ 674 (1391)
|+||++.++.+++++|..++++++|.+|+||++|+.+++++||++|+++++++++++++|++++++++++.+|+.+|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCccccc------------cCC---Ccchhhhhhhhc
Q 000612 675 LLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKF------------TQD---SSETLGVQVLKS 739 (1391)
Q Consensus 675 ~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~g~~~L~~ 739 (1391)
++++.+++||+|+..+||+||+|++|++|++|+++++++|||++.+|.|. ... ...+.|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 99999999999999999999999999999999999999999999999997 111 235678999998
Q ss_pred cCcc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCC
Q 000612 740 RGFF-----AHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNT 814 (1391)
Q Consensus 740 ~~~~-----~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1391)
+++. ...+|+|+++|+++||.++|++++.+++.|+++..+.++++..+...........
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~---------------- 753 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA---------------- 753 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc----------------
Confidence 8887 7888999999999999999999999999999999888877654433222100000
Q ss_pred CCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCC
Q 000612 815 RSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPG 894 (1391)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G 894 (1391)
...... +. ..+....+++++..|+.+..++++||.|.+++|.+++.+| +++++|+||||.++||
T Consensus 754 ~~~~~~------------~~-~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG 817 (1391)
T KOG0065|consen 754 GSSSEI------------EK-LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPG 817 (1391)
T ss_pred cccccc------------cc-cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCC
Confidence 000000 00 0001111345777889899999999999999998888776 6688999999999999
Q ss_pred eEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCC
Q 000612 895 VLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEV 974 (1391)
Q Consensus 895 e~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~ 974 (1391)
.++||||+||||||||||+|+||+++|.++|+|.|||+|+++.+|+|.+|||+|+|+|.+.+||+|.|.|+|+||++.++
T Consensus 818 ~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v 897 (1391)
T KOG0065|consen 818 VLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEV 897 (1391)
T ss_pred ceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000612 975 DSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNT 1053 (1391)
Q Consensus 975 ~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p-~illLDEPTsgLD~~s~~~i~~~l~~~ 1053 (1391)
+.+++.++|++|++.+||.+++|.+||.+| +|||++|||||+||+||++|| .||||||||||||++++..|++++|++
T Consensus 898 ~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkl 976 (1391)
T KOG0065|consen 898 SDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKL 976 (1391)
T ss_pred CHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 999999999999999999999 999999999999999999999999999
Q ss_pred HhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcccCCCCCCCccceeeecchhhhh
Q 000612 1054 VDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQEL 1133 (1391)
Q Consensus 1054 ~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npa~~~l~v~~~~~~~ 1133 (1391)
+++|+|||||+||||.++|+.||++++|++||++||+||+|++|+++++|||+++|++ |++..||||||||+++.+.+.
T Consensus 977 a~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~ 1055 (1391)
T KOG0065|consen 977 ADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEA 1055 (1391)
T ss_pred HhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhccccccc
Confidence 9999999999999999999999999999999999999999999999999999999885 666669999999999998888
Q ss_pred hhcccHHHHHhhcHHHHHHHHHHHhhCCCCCC-CCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 000612 1134 ALGIDFTEHYKRSDLYRRNKALIEDLSRPPPG-SKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIA 1212 (1391)
Q Consensus 1134 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~ 1212 (1391)
..+.||++.|++|+++++++++++++++++++ +.+..++++|++|+|.|++.|+||++++|||+|+|+.+|++++++.|
T Consensus 1056 ~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~g 1135 (1391)
T KOG0065|consen 1056 SLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAG 1135 (1391)
T ss_pred ccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999988 78888999999999999999999999999999999999999999999
Q ss_pred HHHhHhhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHH
Q 000612 1213 LLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYIL 1292 (1391)
Q Consensus 1213 l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~eiP~~~ 1292 (1391)
|+||++||++|+ ++||++|.+|++|+++++.+.+++..++|.+..||.++|||+++||||+.||++||+++|+||++
T Consensus 1136 l~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l 1212 (1391)
T KOG0065|consen 1136 LFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNL 1212 (1391)
T ss_pred HhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHH
Confidence 999999999994 68999999999999999999999988999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Q 000612 1293 VQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPVSLV 1372 (1391)
Q Consensus 1293 ~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~ 1372 (1391)
+++.+|.+|+|+|+||++++.+|+||+++++++.+|++++|||+++++||.++|+++++++++++++||||++|++.||.
T Consensus 1213 ~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~ 1292 (1391)
T KOG0065|consen 1213 LQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPK 1292 (1391)
T ss_pred HHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccCCCCCC
Q 000612 1373 FPFLFQMLDFFFRLNNFCY 1391 (1391)
Q Consensus 1373 ~~~w~~y~s~~~~~~~~~~ 1391 (1391)
||+ ||||+||++|
T Consensus 1293 fW~------wmy~lsP~ty 1305 (1391)
T KOG0065|consen 1293 FWI------WMYYLSPVTY 1305 (1391)
T ss_pred eee------eeeecCcHHH
Confidence 999 6888899887
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=7.5e-225 Score=2227.80 Aligned_cols=1363 Identities=61% Similarity=1.046 Sum_probs=1206.2
Q ss_pred cccccCCCCcccCC---C----CCcchhHhhhHHHHhhCCChhhhhhcccccC-----CCC---cccccccccchHhhHH
Q 000612 19 SRWNTNSIGAFSRS---S----REEDDEEALKWAALEKLPTYNRLRKGILTTS-----RGE---ANEVDVYNLGLQERQR 83 (1391)
Q Consensus 19 ~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~ 83 (1391)
++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ ..|+|+++|+.++++.
T Consensus 19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1470)
T PLN03140 19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK 96 (1470)
T ss_pred hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence 44643 5788542 1 2578999999999999999999999999652 122 2369999999999999
Q ss_pred HHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccc
Q 000612 84 LIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKR 163 (1391)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1391)
+++|++++.++|+++|++++++|.+++|+++|++||+|+||+|++++.++++.+||++|.+.+.++.+.+.++...+++.
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~ 176 (1470)
T PLN03140 97 FIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKT 176 (1470)
T ss_pred HHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCc
Confidence 99999999999999999999999999999999999999999999999899999999999999999988776554445556
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCH
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1391)
+++||+|+||.++|||+++|+||||||||||||+|+|+++++.+++|+|.+||+++++..+++.++||+|+|.|++++||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 78899999999999999999999999999999999999998777899999999998777667889999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+|||.|+++|++.+.++++..+..+++++.++.|+.+++.+|++...++.+.+..++++|+.+||++|+||.||++++++
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 99999999998776666555566677777778888899999999888888888899999999999999999999999999
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..++|+|+++|||.++++++||+|++|++|++
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~i 416 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQI 416 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceE
Confidence 99999999999999999999999999999999999999999999998766789999999999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCCc
Q 000612 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFD 483 (1391)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 483 (1391)
+|+||.+++++||+++||+||+++++|||+++++++++++++|.....|++++++++++++|++++.++++.+++..+.+
T Consensus 417 vy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 496 (1470)
T PLN03140 417 VYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFD 496 (1470)
T ss_pred EEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999988888887776777888999999999999998888888777666
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHHHH
Q 000612 484 KSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFF 563 (1391)
Q Consensus 484 ~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff 563 (1391)
++..++.....++|..++++|++.|++|++++++||+..+++|+++.+++|+++|++|++++++..+..++..+.|++||
T Consensus 497 ~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff 576 (1470)
T PLN03140 497 KSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLF 576 (1470)
T ss_pred hhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Confidence 65556665666779999999999999999999999999999999999999999999999987765555567788999999
Q ss_pred HHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 000612 564 AITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALL 643 (1391)
Q Consensus 564 ~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~ 643 (1391)
++++.+++++++++.++.+||+|+|||+.+||++|+|++++++.++|+.++++++|++|+|||+||++++++||.+++++
T Consensus 577 ~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~ 656 (1470)
T PLN03140 577 SMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLV 656 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCcccc
Q 000612 644 LGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKK 723 (1391)
Q Consensus 644 ~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~ 723 (1391)
+++++++.++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+.+|.+
T Consensus 657 ~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~ 736 (1470)
T PLN03140 657 FLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMN 736 (1470)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred cc-CCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCccc
Q 000612 724 FT-QDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQ 802 (1391)
Q Consensus 724 ~~-~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1391)
.. .+...+.|.++|+.+++..++.|+|++++++++|+++|+++++++++|.++..+.++++..+...............
T Consensus 737 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1470)
T PLN03140 737 KMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS 816 (1470)
T ss_pred cccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc
Confidence 32 33346789999999999999999999999999999999999999999998766655554221111000000000000
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCceE
Q 000612 803 LSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLV 882 (1391)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 882 (1391)
+..-............+.. ....... .............++++.+|+.|..++|+||+|.++.+.+++..+...+++.
T Consensus 817 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~ 894 (1470)
T PLN03140 817 LSSADGNNTREVAIQRMSN-PEGLSKN-RDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQ 894 (1470)
T ss_pred ccccccccccccccccccc-ccccccc-cccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCce
Confidence 0000000000000000000 0000000 0000000001122345667889999999999999998766544444445668
Q ss_pred EeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHH
Q 000612 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESL 962 (1391)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l 962 (1391)
+|+|||++++||+++||||||||||||||++|+|+.+++..+|+|.+||.+..+..+++.+|||+|+|.+++.+||+|+|
T Consensus 895 iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L 974 (1470)
T PLN03140 895 LLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESL 974 (1470)
T ss_pred EeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHH
Confidence 99999999999999999999999999999999999876678999999998876555677899999999999999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000612 963 LFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1042 (1391)
Q Consensus 963 ~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s 1042 (1391)
.|++.+|.+.+.+.++++++++++++.++|.++.|+.+|.+++++|||||||||+||++|+++|+||||||||+|||+.+
T Consensus 975 ~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~ 1054 (1470)
T PLN03140 975 IYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1054 (1470)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Confidence 99998887666666677788999999999999999999998888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcccCCCCCCCccc
Q 000612 1043 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATW 1122 (1391)
Q Consensus 1043 ~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npa~~ 1122 (1391)
+..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++|||||
T Consensus 1055 a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~ 1134 (1470)
T PLN03140 1055 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATW 1134 (1470)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhh
Confidence 99999999999988999999999999888999999999998899999999999999999999999888889999999999
Q ss_pred eeeecchhhhhhhcccHHHHHhhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHH
Q 000612 1123 MLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTA 1202 (1391)
Q Consensus 1123 ~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~ 1202 (1391)
|+|+++.+.+...+.||++.|++|++++++++.+++++.++++.++..++++|++|+|+|+++|+||+++++||||.|+.
T Consensus 1135 ~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~ 1214 (1470)
T PLN03140 1135 MLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNL 1214 (1470)
T ss_pred hhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHH
Confidence 99999876665666799999999999999988888887776666666667889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHH
Q 000612 1203 VRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALA 1282 (1391)
Q Consensus 1203 ~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a 1282 (1391)
+|+++++++|+++|++||+++++..+++|+++++|++|++++|+++.++++++|++..||+||+|||++|+|++++|++|
T Consensus 1215 ~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la 1294 (1470)
T PLN03140 1215 VRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIA 1294 (1470)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 99999999999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcc
Q 000612 1283 QVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSG 1362 (1391)
Q Consensus 1283 ~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~G 1362 (1391)
++++|+||.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|++++++++++|++|||
T Consensus 1295 ~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~G 1374 (1470)
T PLN03140 1295 QVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSG 1374 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccchhhhhhhccccc
Q 000612 1363 FIIPRPVSLVFPFLFQMLDFFFR 1385 (1391)
Q Consensus 1363 f~i~~~~ip~~~~w~~y~s~~~~ 1385 (1391)
|++|+++||+||+|++|+|++.|
T Consensus 1375 f~i~~~~iP~~~~W~~~isp~~y 1397 (1470)
T PLN03140 1375 FFIPRPKIPKWWVWYYWICPVAW 1397 (1470)
T ss_pred eccChHHCchHHHHHHHcCHHHH
Confidence 99999999999999888888776
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.7e-179 Score=1800.63 Aligned_cols=1227 Identities=32% Similarity=0.537 Sum_probs=1011.8
Q ss_pred ccChHHHHHHHHHHHhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeec
Q 000612 93 DVDNERFLLKLKNRIDRVGIDLP--KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKD 170 (1391)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 170 (1391)
+.|.+++++.++++.++.+...| +++|+|+||+|++ ...+...+||+.|.+.+.+..+...+. ..+++++++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 35677777765555555555555 9999999999999 444666789999998887765443331 1234456789999
Q ss_pred ceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCHHHHH
Q 000612 171 VSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETL 247 (1391)
Q Consensus 171 vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTVrE~l 247 (1391)
+|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++++||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 999999999999999999999999999999974211 24999999999875432 235699999999999999999999
Q ss_pred HHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChh
Q 000612 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGG 327 (1391)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1391)
.|+++++.+..+.... .+. +..+..++.+++.+||++++||.||++.+++||||
T Consensus 160 ~f~~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPDGV---SRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCCCC---CHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 9998776422110000 000 00112356789999999999999999999999999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000612 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1391)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1391)
|||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++||++++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999886557899999999999999999999999999999999
Q ss_pred ChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCCccc--
Q 000612 408 PRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKS-- 485 (1391)
Q Consensus 408 ~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-- 485 (1391)
+++++.+||+++||.||++.|+|||+.+++++.+ ++++...+. ....+.++++++|++++.++++.++++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~-~~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAE-RQIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhh-hhccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999999999999999998754 222211111 123578899999999887776665543321110
Q ss_pred -------------cccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccc
Q 000612 486 -------------KSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVT 552 (1391)
Q Consensus 486 -------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~ 552 (1391)
...+.......|..++++|++.|++|+++.++||+..++.++++.+++|+++|++|++.+.+. .
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---S 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---h
Confidence 000111233468889999999999999999999999999999999999999999999766432 3
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCc
Q 000612 553 DGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSN 632 (1391)
Q Consensus 553 ~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~ 632 (1391)
+.+.+.|++||++++.++.++.++..++.+|++|+|||..++|++++|++++.+.++|+.++.+++|++|+|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 55677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHH
Q 000612 633 AGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIV 712 (1391)
Q Consensus 633 ~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~ 712 (1391)
+++||.+++++++...++.+++++++++++++.+|+.+++++++++++|+||+++.++||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcccccc--C----------------------CCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHH
Q 000612 713 ANEFLGHSWKKFT--Q----------------------DSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYT 768 (1391)
Q Consensus 713 ~nef~~~~~~~~~--~----------------------~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~ 768 (1391)
.|||.+..+.|.. | +.....|.++|+. ++.....|.|.+++++++|+++|.++++
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999998887741 1 1123478888885 3344566899999999999999999999
Q ss_pred HHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcc
Q 000612 769 LALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMV 848 (1391)
Q Consensus 769 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (1391)
++++|.++......++............... ..+......++.... .......+... ......
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~e~~~~~-----~~~~~~~~~~~-~~~~~~ 750 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAKKAGE-----------TSASNKNDIEAGEVL-----GSTDLTDESDD-VNDEKD 750 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchhhccc-----------ccccccccccccccC-----CCCcccccccc-cccccc
Confidence 9999988654433332211100000000000 000000000000000 00000000000 000000
Q ss_pred cC--CCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEE
Q 000612 849 LP--FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITG 925 (1391)
Q Consensus 849 ~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G 925 (1391)
.| .....++|+|++|.++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|
T Consensus 751 ~~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G 821 (1394)
T TIGR00956 751 MEKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGG 821 (1394)
T ss_pred ccccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCccee
Confidence 01 112357899999988532 13457999999999999999999999999999999999997644 4569
Q ss_pred EEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 926 NITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 926 ~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
+|.+||.+... .+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.+.++++++++++++.++|.++.|+.+|.++
T Consensus 822 ~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~- 899 (1394)
T TIGR00956 822 DRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG- 899 (1394)
T ss_pred EEEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-
Confidence 99999998753 4678899999999999999999999999988876666667777889999999999999999998764
Q ss_pred CCCCHHHHHHHHHHHHHhhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1006 SGLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~-illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
.+|||||||||+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++|
T Consensus 900 ~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~G 979 (1394)
T TIGR00956 900 EGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKG 979 (1394)
T ss_pred CCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCC
Confidence 3899999999999999999997 999999999999999999999999998889999999999997788999999999998
Q ss_pred cEEEEecCCCCchhhHHHHHHhCCCcccCCCCCCCccceeeecchhhhhhhcccHHHHHhhcHHHHHHHHHHHhhCCCCC
Q 000612 1085 GQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPP 1164 (1391)
Q Consensus 1085 G~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 1164 (1391)
|+++|+|+.+++++++++||+++ |.++||+++|||||+||+++...+.....||.+.|++|++++.+.+.++++..+..
T Consensus 980 G~iv~~G~~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 1058 (1394)
T TIGR00956 980 GQTVYFGDLGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELS 1058 (1394)
T ss_pred CEEEEECCcccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccc
Confidence 89999999999999999999996 66679999999999999988654443456899999999998887766655433221
Q ss_pred CCC---CCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHH
Q 000612 1165 GSK---DLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFT 1241 (1391)
Q Consensus 1165 ~~~---~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~ 1241 (1391)
... +....++|+.|+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+
T Consensus 1059 ~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~ 1135 (1394)
T TIGR00956 1059 KAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFM 1135 (1394)
T ss_pred cCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHH
Confidence 111 111224689999999999999999999999999999999999999999999999986 47899999999999
Q ss_pred HHHHHHHhhhhcccchhhhhhhHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccCHhH------
Q 000612 1242 AVLFLGVQYCSSVQPIVSVERTVF-YREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAK------ 1314 (1391)
Q Consensus 1242 ~~~~~~~~~~~~v~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~------ 1314 (1391)
++++.++.+ .+++|.+..||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.+
T Consensus 1136 ~~~~~~~~~-~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~ 1214 (1394)
T TIGR00956 1136 ATVLFNPLI-QQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHE 1214 (1394)
T ss_pred HHHHHHHHH-HHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccc
Confidence 988887764 45567788888875 9999999999999999999999999999999999999999999988876
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCCccchhhhhhhcccccC
Q 000612 1315 -FFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPVSLVFPFLFQMLDFFFRL 1386 (1391)
Q Consensus 1315 -f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~y~s~~~~~ 1386 (1391)
|++|+++++++.++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|++|+|+++|.
T Consensus 1215 ~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~ 1287 (1394)
T TIGR00956 1215 RGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYL 1287 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998888773
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.5e-89 Score=849.48 Aligned_cols=511 Identities=33% Similarity=0.604 Sum_probs=452.3
Q ss_pred CCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEEEEEEc
Q 000612 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITIS 930 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 930 (1391)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567899999998865421 3468999999999999999999999999999999999998764 789999999
Q ss_pred CccCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 931 GYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 931 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
|++.+...+++.+|||+|+|.++|++||+|+|.|+|.+|++.+.+.++++++|+++++.+||.+++|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988899999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred cCCCCchhhHHHHHHhCCCcccCCCCCCCccceeeecchh--h-hhh---hcccHHHHHhhcHHHHHHHH-HHHhhCCCC
Q 000612 1091 GPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAAS--Q-ELA---LGIDFTEHYKRSDLYRRNKA-LIEDLSRPP 1163 (1391)
Q Consensus 1091 G~~~~~~~~~~~yF~~~~g~~~~~~~~npa~~~l~v~~~~--~-~~~---~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~ 1163 (1391)
|+. +++.+||+++ |. +||+++|||||++|+.+.. . +.. ......+.++..+...+..+ ..+.+..
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 324 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLST-- 324 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhccc--
Confidence 997 6899999998 55 4999999999999988742 1 100 00011111111111111110 0011111
Q ss_pred CCCCCCCCCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHHHH
Q 000612 1164 PGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAV 1243 (1391)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1243 (1391)
.++ .+.....+||.|+..+++|.+++.+|||.+...|+++.+++|+++|++||+++. +..+++++.|++|+.+
T Consensus 325 --~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 325 --SKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFIL 397 (613)
T ss_pred --ccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHH
Confidence 111 111127899999999999999999999999999999999999999999999975 4566779999999999
Q ss_pred HHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccCHhHHHHHHHHHH
Q 000612 1244 LFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMY 1323 (1391)
Q Consensus 1244 ~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1323 (1391)
.++.+..+...++.++.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++.++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99989888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCCccchhhhhhhcccccC
Q 000612 1324 FTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPVSLVFPFLFQMLDFFFRL 1386 (1391)
Q Consensus 1324 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~y~s~~~~~ 1386 (1391)
+..+.+.++|++++++.||...|..+++++.+.+++|+||+++.++||.||+|++|+||++|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~ 540 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYA 540 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999873
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.7e-87 Score=840.78 Aligned_cols=517 Identities=25% Similarity=0.425 Sum_probs=438.2
Q ss_pred CCceeEEeceeeEeecchhhh--------------hcc--cccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHc
Q 000612 852 EPHSLTFDEVVYSVDMPEEMK--------------VQG--VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 915 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~~~--------------~~~--~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~ 915 (1391)
.+.++.|.+++|+++...... ..+ ...+++.+|+|||+++++||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999987542100 000 1123467999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000612 916 GRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL 995 (1391)
Q Consensus 916 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 995 (1391)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876444689999999876532 345689999999999999999999999877765555566667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhc
Q 000612 996 RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1075 (1391)
Q Consensus 996 ~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~ 1075 (1391)
.|+.+|....++||||||||++||++|+++|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999997789999
Q ss_pred CeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcccCCCCCCCccceeeecchhhhh------h---hcccHHHHHhhc
Q 000612 1076 DELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQEL------A---LGIDFTEHYKRS 1146 (1391)
Q Consensus 1076 D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npa~~~l~v~~~~~~~------~---~~~~~~~~~~~s 1146 (1391)
|++++|++ |+++|.|+. +++++||+++| . +||+++|||||++|+++...+. . ...+..+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999997 68999999994 4 5999999999999998753210 0 001233455432
Q ss_pred HHHHHHHHHHHh--hCC-CCC-----CCCCCC-CCCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhH
Q 000612 1147 DLYRRNKALIED--LSR-PPP-----GSKDLY-FPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGS 1217 (1391)
Q Consensus 1147 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1217 (1391)
. .++.++.++. ... +.+ ..+... ..+.+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 001000 11235578999999999999988 99999999999999999999999
Q ss_pred hhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000612 1218 LFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVV 1297 (1391)
Q Consensus 1218 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~ 1297 (1391)
+||+++ ..+++++.|++|++++++++.+++.+++.++.||+||+|||.+|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999998888888888999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCCccchhhh
Q 000612 1298 YGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPVSLVFPFLF 1377 (1391)
Q Consensus 1298 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1377 (1391)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||..+|+.+++++++++++|+||+|+ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhccccc
Q 000612 1378 QMLDFFFR 1385 (1391)
Q Consensus 1378 ~y~s~~~~ 1385 (1391)
+|+||++|
T Consensus 579 ~ylS~~~y 586 (659)
T PLN03211 579 KYISTTFY 586 (659)
T ss_pred HHhCHHHH
Confidence 99999887
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1e-85 Score=832.97 Aligned_cols=498 Identities=31% Similarity=0.499 Sum_probs=444.7
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCc
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 957 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1391)
+++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3467999999999999999999999999999999999987543 358999999998766667788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000612 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1391)
Q Consensus 958 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~lSgGqrqRl~iA~~L~~~p~illLDEPTs 1036 (1391)
|+||+.|++.++.+.+.+.++++++++++++.+||.++.|+.+|.++ .++|||||||||+||+||+++|+++||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999998887766777788889999999999999999999764 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcccCCCC
Q 000612 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDG 1116 (1391)
Q Consensus 1037 gLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~ 1116 (1391)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|+||. +++.+||++++ . +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g-~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG-H-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC-C-CCCCC
Confidence 9999999999999999998899999999999988999999999998 5899999997 68999999984 4 69999
Q ss_pred CCCccceeeecchhhhhh-----hcccHHHHHhhcHHHHHHHHHHHhhCCCCCC---CCCCCCCCccCCcHHHHHHHHHH
Q 000612 1117 YNPATWMLEVSAASQELA-----LGIDFTEHYKRSDLYRRNKALIEDLSRPPPG---SKDLYFPTQFSQSSWIQFVACLW 1188 (1391)
Q Consensus 1117 ~npa~~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~ 1188 (1391)
.|||||++|+++...+.. ...++.+.|++|+.+++..+.+.....+.++ .......+++..+++.|+..|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543211 1235677888887776655443322111111 11111234678899999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHhh
Q 000612 1189 KQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYRE 1268 (1391)
Q Consensus 1189 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~~er~v~~rE 1268 (1391)
|+++++||||.+..+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999976 46789999999999999999988778889999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 000612 1269 KAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAI 1348 (1391)
Q Consensus 1269 ~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1348 (1391)
+.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++||..+|..
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCccchhhhhhhcccccC
Q 000612 1349 VSTLFYGLWNVFSGFIIPRPVSLVFPFLFQMLDFFFRL 1386 (1391)
Q Consensus 1349 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~y~s~~~~~ 1386 (1391)
+++++++++++|+||+++.++||+||+|++|+|+++|.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya 543 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYG 543 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHH
Confidence 99999999999999999999999999999999998874
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.9e-82 Score=854.76 Aligned_cols=524 Identities=24% Similarity=0.379 Sum_probs=450.7
Q ss_pred CCceeEEeceeeEeecchh-------------hh--h----cccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHH
Q 000612 852 EPHSLTFDEVVYSVDMPEE-------------MK--V----QGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMD 912 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~-------------~~--~----~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~ 912 (1391)
....+.|+|++.+....+. .. . .+....++.+|+|||+.++|||+++|+||||||||||||
T Consensus 26 ~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk 105 (1394)
T TIGR00956 26 YKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLK 105 (1394)
T ss_pred CeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHH
Confidence 4567899999877622110 00 0 012224467999999999999999999999999999999
Q ss_pred hHcCCCCC--CeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCC----CCCHHHHHHH-H
Q 000612 913 VLAGRKTG--GYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP----EVDSETRKMF-I 983 (1391)
Q Consensus 913 ~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~----~~~~~~~~~~-v 983 (1391)
+|+|+..+ .+.+|+|.+||.+... ..+++.++|++|+|.|++.+||+|+|.|++.++.+. ..+.+++++. +
T Consensus 106 ~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 185 (1394)
T TIGR00956 106 TIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHIA 185 (1394)
T ss_pred HHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 99998632 2468999999987643 234567999999999999999999999998887643 2334443333 5
Q ss_pred HHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE
Q 000612 984 DEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVC 1062 (1391)
Q Consensus 984 ~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~ 1062 (1391)
+++++.+||.+++|+.+|++.+++|||||||||+||++|+.+|+|+||||||+|||+.++..+++.|++++++ |+|||+
T Consensus 186 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii 265 (1394)
T TIGR00956 186 DVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLV 265 (1394)
T ss_pred HHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 7789999999999999999888999999999999999999999999999999999999999999999999874 999999
Q ss_pred EecCCCHHHHHhcCeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcccCCCCCCCccceeeecchhhhh---------
Q 000612 1063 TIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQEL--------- 1133 (1391)
Q Consensus 1063 ~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npa~~~l~v~~~~~~~--------- 1133 (1391)
++|||+.++++.||++++|++ |+++|+||. +++++||+++ |. +||+++|||||++|++++..+.
T Consensus 266 ~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l-G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~ 338 (1394)
T TIGR00956 266 AIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM-GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKV 338 (1394)
T ss_pred EecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-CC-CCCCCCChHHHHHhccChhhhhccccccccC
Confidence 999998889999999999986 799999997 6899999999 44 6999999999999998864311
Q ss_pred -hhcccHHHHHhhcHHHHHHHHHHHhhCCCC---------------CCCCCCCCCCccCCcHHHHHHHHHHHHHHHHhcC
Q 000612 1134 -ALGIDFTEHYKRSDLYRRNKALIEDLSRPP---------------PGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRN 1197 (1391)
Q Consensus 1134 -~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~ 1197 (1391)
....+|++.|++|+.+++..+.++...... ..++.....+.|..|+|+|+++|++|+++.+|||
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd 418 (1394)
T TIGR00956 339 PRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGN 418 (1394)
T ss_pred CCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 123479999999999887766554321110 0011112234688899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChH
Q 000612 1198 PPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGI 1277 (1391)
Q Consensus 1198 ~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~ 1277 (1391)
|.++.+|+++.+++|+++|++||++++ +++++++++|++|++++++++.++..+ +.+..||+||+|||.+++|+++
T Consensus 419 ~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ 494 (1394)
T TIGR00956 419 PSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPS 494 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHH
Confidence 999999999999999999999999986 457899999999999999999887765 4456799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 000612 1278 PWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLW 1357 (1391)
Q Consensus 1278 ~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~ 1357 (1391)
+|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++++.++++++|+++++++||..+|+.+++++++++
T Consensus 495 ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~ 574 (1394)
T TIGR00956 495 ADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLAL 574 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccCCCCCccchhhhhhhcccccC
Q 000612 1358 NVFSGFIIPRPVSLVFPFLFQMLDFFFRL 1386 (1391)
Q Consensus 1358 ~lf~Gf~i~~~~ip~~~~w~~y~s~~~~~ 1386 (1391)
++|+||+||+++||+||+|++|+|+++|.
T Consensus 575 ~lf~Gf~i~~~~mp~~~~W~~yisp~~ya 603 (1394)
T TIGR00956 575 SIYTGFAIPRPSMLGWSKWIYYVNPLAYA 603 (1394)
T ss_pred HHHcccccChhhccHHHHHHHHcCHHHHH
Confidence 99999999999999999999999998873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.2e-82 Score=848.52 Aligned_cols=528 Identities=23% Similarity=0.339 Sum_probs=449.2
Q ss_pred CCCCceeEEeceeeEeec-------chhh-----------hhcc---cccCceEEeeccEEEEeCCeEEEEEccCCCChH
Q 000612 850 PFEPHSLTFDEVVYSVDM-------PEEM-----------KVQG---VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 908 (1391)
Q Consensus 850 ~~~~~~~~~~~v~~~~~~-------~~~~-----------~~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKS 908 (1391)
+.+...+.|+|+++.... |.-. ...+ ..+.++.+|+||||.++|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 334567899999887652 1100 0001 122356799999999999999999999999999
Q ss_pred HHHHhHcCCCCC-CeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCC-------CCHHHH-
Q 000612 909 TLMDVLAGRKTG-GYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETR- 979 (1391)
Q Consensus 909 TLl~~L~g~~~~-~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~-------~~~~~~- 979 (1391)
|||++|+|+.++ ...+|+|.+||.+......++.++||+|+|.|++.+||+|+|.|++.++.... ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 999999998653 24589999999987554446789999999999999999999999988764211 111111
Q ss_pred -----------------------HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000612 980 -----------------------KMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1391)
Q Consensus 980 -----------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTs 1036 (1391)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+++||||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 123678999999999999999998889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcccCCC
Q 000612 1037 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKD 1115 (1391)
Q Consensus 1037 gLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~ 1115 (1391)
|||+.++..+++.|+++++ .|+|||+++|||+.+++++||++++|++ |+++|+||. +++++||+++ |. +||+
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~l-Gf-~cP~ 438 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESC-GF-KCPE 438 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHc-CC-CCCC
Confidence 9999999999999999986 4899999999998899999999999985 799999997 7899999999 44 6999
Q ss_pred CCCCccceeeecchhhh-h-----------hhcccHHHHHhhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCcHHHHH
Q 000612 1116 GYNPATWMLEVSAASQE-L-----------ALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSSWIQF 1183 (1391)
Q Consensus 1116 ~~npa~~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~ 1183 (1391)
++|||||++|+++.... . ....+|++.|++|+.+++..+.++.........+.....++|..|++.|+
T Consensus 439 ~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~ 518 (1470)
T PLN03140 439 RKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELL 518 (1470)
T ss_pred CCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHH
Confidence 99999999999986332 1 11246899999999887766544321111111111112346889999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhhhhhh
Q 000612 1184 VACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERT 1263 (1391)
Q Consensus 1184 ~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~~er~ 1263 (1391)
+.|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+..+|++|+++++++++++.. ++.+..||+
T Consensus 519 ~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~ 597 (1470)
T PLN03140 519 KACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLP 597 (1470)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccc
Confidence 9999999999999999999999999999999999999998664445566778999999999988877655 477788999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Q 000612 1264 VFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNH 1343 (1391)
Q Consensus 1264 v~~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~ 1343 (1391)
||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+.
T Consensus 598 vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~ 677 (1470)
T PLN03140 598 VFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTM 677 (1470)
T ss_pred hhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCccchhhhhhhccccc
Q 000612 1344 HIAAIVSTLFYGLWNVFSGFIIPRPVSLVFPFLFQMLDFFFR 1385 (1391)
Q Consensus 1344 ~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~y~s~~~~ 1385 (1391)
.+|+.+++++++++++|+||+||+++||+||+|++|+|++.|
T Consensus 678 ~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Y 719 (1470)
T PLN03140 678 IIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSY 719 (1470)
T ss_pred HHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHH
Confidence 999999999999999999999999999999999999998876
No 9
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.7e-80 Score=769.94 Aligned_cols=583 Identities=30% Similarity=0.494 Sum_probs=491.3
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHH
Q 000612 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1391)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1391)
...++++|+|++++.... .+ ..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 357889999999997542 11 4577999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhc
Q 000612 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1391)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1391)
||++|+|+.+....++|+|++||++.+....++.+|||.|+|.+++++||+|++.|+++++-+...
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~-------------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSL-------------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCC--------------
Confidence 999999999876678999999998777666778999999999999999999999999988754310
Q ss_pred CCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000612 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1391)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsg 353 (1391)
..++.+.++|++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 122345679999999999999999999998899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000612 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1391)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1391)
||+.++.++++.|+++|+. ++|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999985 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCch--hhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCCccccccccccccccccCcHHHHHHHHHHH
Q 000612 434 QEVTSRK--DQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISR 511 (1391)
Q Consensus 434 ~~v~s~~--~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 511 (1391)
.++.+.. .+...... ......+.++..+...+........... ..........++|.|+..+.+|
T Consensus 280 l~l~s~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEAV--------RIAKLINKFSQTDNLKKTLEALEKSLST-----SKKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhHH--------HHHHHhhhccccchhhhhHHHHhhhccc-----ccccccccCCcHHHHHHHHHHH
Confidence 9987742 11100000 0000011111000000000000000000 0000111167899999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHHHHHHHHHHHhHHH-HHHHHhhhhhhHHHhh
Q 000612 512 ELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQR 590 (1391)
Q Consensus 512 ~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~l~~~~~~~~vf~k~r 590 (1391)
.+..+.|++.+...|.++.+++++++|++|++.+.+.. ......|++|+.+.+..+.... .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999998754433 2335678888888887666554 6889999999999999
Q ss_pred hcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Q 000612 591 DFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTF 670 (1391)
Q Consensus 591 ~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~ 670 (1391)
.+++|+.++|++++.+.++|+.++.+++|++++|||+|++++..+|+.+.++.++...++.+++.+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCccccccC--CCcchhhhhhhhccCcccccch
Q 000612 671 GSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ--DSSETLGVQVLKSRGFFAHEYW 748 (1391)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~ 748 (1391)
++.+++.+++++||+++.++||.||+|+.|+|+.+|++++++.|||.+....|... ..+...|.++++..++...+
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS-- 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--
Confidence 99999999999999999999999999999999999999999999999744444332 34556788889888876544
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000612 749 YWLGLGALFGFVLLLNFAYTLALTFLD 775 (1391)
Q Consensus 749 ~w~~~g~l~~~~~~~~~~~~l~l~~~~ 775 (1391)
.|.++.+++++.++|+++.++++++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 678999999999999999999998864
No 10
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=5.3e-79 Score=770.03 Aligned_cols=609 Identities=21% Similarity=0.323 Sum_probs=470.0
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHH
Q 000612 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1391)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1391)
.+.++++|+|+++.+.......+... +...+..-. .......+..++++|+|+|+++++||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~-~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKP-KISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccccc-ccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45799999999998753210111110 000000000 0000011223467999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhc
Q 000612 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1391)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1391)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+...
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------------- 173 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------------- 173 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC--------------
Confidence 999999998874 3489999999987532 235699999999999999999999998765421100
Q ss_pred CCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000612 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1391)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsg 353 (1391)
..++...+++++++.+||++++||.||++..++|||||||||+||++|+.+|+||||||||+|
T Consensus 174 -----------------~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 174 -----------------TKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 001122356889999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000612 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1391)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1391)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+++++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999875 5788888888888789999999999999999999999999999999999999999999999
Q ss_pred HHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcC---CCcccc-----cccc-ccccccccCcHHHH
Q 000612 434 QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTETYGVGKREL 504 (1391)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 504 (1391)
.++++...+.......+.+ ...+++.+.|++.. .++..++... .....+ ..+. ......+..++++|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998754321000000001 01123333443211 1111111000 000000 0000 00112245679999
Q ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHHHHHHHHHHH-hHHHHHHHHhhhh
Q 000612 505 LKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNF-NGFSEISMTIAKL 583 (1391)
Q Consensus 505 ~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~l~~~~~~~ 583 (1391)
+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+...|++||.+++.++ ..++.++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999653 23456678999998777554 5568888889999
Q ss_pred hhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000612 584 PVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRN 663 (1391)
Q Consensus 584 ~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~ 663 (1391)
++|+|||.+++|++++|++++.+.++|+.++.+++|++|+|||+|+.+++++|+.+++++++...++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCcc-----ccccCCCcchhhhhhhh
Q 000612 664 MVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW-----KKFTQDSSETLGVQVLK 738 (1391)
Q Consensus 664 ~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~~L~ 738 (1391)
+.+|+.+++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 34221110111122222
Q ss_pred ccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000612 739 SRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1391)
Q Consensus 739 ~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~ 775 (1391)
...+. ....|.+++++++++++++++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 235788999999999999999999998653
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.2e-79 Score=775.29 Aligned_cols=569 Identities=25% Similarity=0.415 Sum_probs=479.8
Q ss_pred cccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCC
Q 000612 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1391)
+.++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34577999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc-
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM- 320 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1391)
||+|||.|+++++.+.... .++...+++++++.+||++++||.||+++
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998775321100 01123457889999999999999999864
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999875 5789999999999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcC
Q 000612 401 GQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT 480 (1391)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 480 (1391)
|+++|+|+++++.+||+++||+||++.|++||+.++++....... . .....+++.+.|+.++..++..++...
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998865322110 0 011234555666655544443332221
Q ss_pred CCcccc---ccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccch
Q 000612 481 PFDKSK---SHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1391)
Q Consensus 481 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~ 557 (1391)
...... ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00001122356788999999999999999999999999999999999999999999765432 344556
Q ss_pred hhHHHHHHHHHHHhHH-HHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHH
Q 000612 558 AGATFFAITMVNFNGF-SEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRF 636 (1391)
Q Consensus 558 ~g~lff~~~~~~~~~~-~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 636 (1391)
.|++|+.++...+.+. ..+..+..++++|+|||..++|++++|++++.+.++|+.++.+++|++++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889998888777754 556777789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhh
Q 000612 637 FKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEF 716 (1391)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef 716 (1391)
|.+++++++...++.+++.++++++++..+|..+++++++++++|+||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccccCC---CcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000612 717 LGHSW-KKFTQD---SSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1391)
Q Consensus 717 ~~~~~-~~~~~~---~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~ 774 (1391)
.+..+ .|...+ .+...|..+|+.+|+..+ +.|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 443211 123458899998888654 458999999999999999999999874
No 12
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-78 Score=761.02 Aligned_cols=842 Identities=22% Similarity=0.272 Sum_probs=463.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHH-hhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRI-DRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1391)
...++....+++++++..+. +...- +..-......+|+|+|+++++.
T Consensus 314 f~~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYP--------------------------- 361 (1228)
T KOG0055|consen 314 FAKARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYP--------------------------- 361 (1228)
T ss_pred HhccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCC---------------------------
Confidence 56788888999999888775 22111 1112233578999999999873
Q ss_pred hcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000612 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1391)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1391)
++ ++..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.+||.++.+++. +.++|.|+|
T Consensus 362 ---sR-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Q 434 (1228)
T KOG0055|consen 362 ---SR-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQ 434 (1228)
T ss_pred ---CC-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeee
Confidence 23 3567999999999999999999999999999999999999999 9999999999988765 478999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 234 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
+|.+| ..||+|||.|+. ++...+...++++...+ .--+..|++.+|
T Consensus 435 ePvlF-~~tI~eNI~~G~----~dat~~~i~~a~k~ana-----------------------------~~fi~~lp~g~~ 480 (1228)
T KOG0055|consen 435 EPVLF-ATTIRENIRYGK----PDATREEIEEAAKAANA-----------------------------HDFILKLPDGYD 480 (1228)
T ss_pred chhhh-cccHHHHHhcCC----CcccHHHHHHHHHHccH-----------------------------HHHHHhhHHhhc
Confidence 99655 579999999875 22233334444433221 112445888999
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
|.||++++. |||||||||+|||||+.+|+|||||||||+||+.++..+.+.|++.. .++|+|++ .|. ..+.+.+|
T Consensus 481 T~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTivV-aHR-LStIrnaD 555 (1228)
T KOG0055|consen 481 TLVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIVV-AHR-LSTIRNAD 555 (1228)
T ss_pred ccccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEEE-eee-hhhhhccC
Confidence 999998874 99999999999999999999999999999999999999999999864 45666664 343 45566699
Q ss_pred eEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH--HHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch--
Q 000612 394 DIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL--QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH-- 469 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-- 469 (1391)
+|++|++|+||+.|+|+|++.. ..-.++.. |+....++. ..+ +.. ...+.....+.+.
T Consensus 556 ~I~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~---~~~----~~~~~~~s~~~s~~~ 617 (1228)
T KOG0055|consen 556 KIAVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEE---EES----LKEERSRSLKSSSSS 617 (1228)
T ss_pred EEEEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-ccc---ccc----hhhhhhhcccccccc
Confidence 9999999999999999999862 11112222 222221110 000 000 0000000000000
Q ss_pred --hhhh-HHHhh--cCCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH-------HHHH
Q 000612 470 --VGQK-ISDEL--RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFV-------AVVY 537 (1391)
Q Consensus 470 --~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~-------~li~ 537 (1391)
..+. ..... ..+.++ ...... .......+.+ |-+...+.++.+.+...+..++. +.++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~e-~~~~~~-~~~~~~~s~~--------~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~ 687 (1228)
T KOG0055|consen 618 PSLSRGSNRSNLLSVKPEGE-DPEEPV-SEEDEKVSFW--------RIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVF 687 (1228)
T ss_pred ccccCCcccccccccccccc-cccccc-ccccccccHH--------HHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 0000 00000 000000 000000 0111222333 33334444444444433333332 3333
Q ss_pred HHHhhccc-CCCcccccccchhhHHHHHHHHHHH--hHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHH
Q 000612 538 MTLFLRTK-MHKDTVTDGGIFAGATFFAITMVNF--NGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFL 614 (1391)
Q Consensus 538 gt~f~~~~-~~~~~~~~~~~~~g~lff~~~~~~~--~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~ 614 (1391)
+.++--.. .+.+..........++|.++....+ +-+......+.....-.|-|.
T Consensus 688 s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~----------------------- 744 (1228)
T KOG0055|consen 688 SQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRS----------------------- 744 (1228)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 32221001 1111111111112333332222111 111111111111111111111
Q ss_pred HHHHHHHHHHhhcCCCCc---HHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhccc
Q 000612 615 EVAVWVFLSYYVVGYDSN---AGRFFKQYALLL-----GVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFIL 686 (1391)
Q Consensus 615 ~~~i~~~i~Y~~~g~~~~---~~~f~~~~l~~~-----~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i 686 (1391)
..|..+.+.-+++-.+ .++....+...- .+..-...+...++++.-.+.+|...++-+.++.+....+++
T Consensus 745 --~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~ 822 (1228)
T KOG0055|consen 745 --MMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLI 822 (1228)
T ss_pred --HHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222222222111 133333332211 111222223334444444455555555544443333222111
Q ss_pred CccchhHHHHHHHHHc---HHHHHHHHHHHHhhcCCccccccCCCcchhhhhhhhccCc-----c--cccchhHHHHHHH
Q 000612 687 SREDIKKWWKWAYWCS---PLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGF-----F--AHEYWYWLGLGAL 756 (1391)
Q Consensus 687 ~~~~ip~~~~W~~~is---P~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~-----~--~~~~~~w~~~g~l 756 (1391)
-...... +++.-.+ --.|.-.+-+++|-..+-.... .......++..+.- . ......|.+++.-
T Consensus 823 ~~~~~~~--~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~----al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~ 896 (1228)
T KOG0055|consen 823 LSGYLQK--KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA----ALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFG 896 (1228)
T ss_pred HHHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000000 0001111111111111000000 00000111111000 0 0001123333322
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhh
Q 000612 757 FGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAE 836 (1391)
Q Consensus 757 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (1391)
+...++| +.+.++++|-..+-............ .. ....++...........|+-.++...........+
T Consensus 897 ~sqs~~~-~~~A~~f~~G~~Li~~g~~~~~~~~~-----vf----~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~d 966 (1228)
T KOG0055|consen 897 FSQSLLF-FVYALSFWYGARLISNGEMTFEDVFR-----VF----MALSFTAMALGQASSYAPDISKAKIAAGSIFEILD 966 (1228)
T ss_pred HHHHHHH-HHHHHHHHHhHHHHhcCCcCHHHHHH-----HH----HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhc
Confidence 2222221 23334444432211111000000000 00 00000000000000011111100000000000001
Q ss_pred hhc--CCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhH
Q 000612 837 AEA--SRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVL 914 (1391)
Q Consensus 837 ~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L 914 (1391)
..+ +.....+...|.-...++|+||+|.||..+ ..++|+|+|++|++|+.+||+|||||||||.+.+|
T Consensus 967 r~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LL 1036 (1228)
T KOG0055|consen 967 RKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLL 1036 (1228)
T ss_pred CCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 111 111112323444556899999999998654 35799999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-
Q 000612 915 AGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV- 990 (1391)
Q Consensus 915 ~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l- 990 (1391)
-+..+ +..|.|.|||.+++. ..+|+.+|.|.|+|.++. .|++||+.|+. .+++.++ +.++++..
T Consensus 1037 eRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~AN 1104 (1228)
T KOG0055|consen 1037 ERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKLAN 1104 (1228)
T ss_pred HHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHHhh
Confidence 87654 578999999998765 457789999999999985 69999999981 1234333 44444443
Q ss_pred ------CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Q 000612 991 ------ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTI 1064 (1391)
Q Consensus 991 ------~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~ 1064 (1391)
+|.+-.||.+|..|. .||||||||++|||||++||+||+|||.||.||+++.+.|+++|.+.. .|||.|+++
T Consensus 1105 aH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIA 1182 (1228)
T KOG0055|consen 1105 AHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIA 1182 (1228)
T ss_pred hHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEe
Confidence 455567899998764 799999999999999999999999999999999999999999999974 599999999
Q ss_pred cCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1065 HQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1065 Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|++| ....+|.|.++++ |++++.|.-
T Consensus 1183 HRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1183 HRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred cchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 9987 4688999999985 899999985
No 13
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-74 Score=724.43 Aligned_cols=497 Identities=26% Similarity=0.430 Sum_probs=442.6
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCc
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 957 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 957 (1391)
.+..+|+|+||.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|++|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999976532 235799999999876545788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000612 958 IYESLLFSAWLRLSPE----VDSETRKM-FIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1391)
Q Consensus 958 v~e~l~f~a~lr~~~~----~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLD 1032 (1391)
|+|+|.|+++++.+.. .++.++.+ ..+.+++.+||++++|++||++..+|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999988732 22333222 578999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCCchhhHHHHHHhCCCcc
Q 000612 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQ 1111 (1391)
Q Consensus 1033 EPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~ 1111 (1391)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |++||+||. +++++||+++| .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G-f- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG-F- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC-c-
Confidence 999999999999999999999865 899999999999999999999999996 799999998 68999999985 4
Q ss_pred cCCCCCCCccceeeecchhhhh-----------hhc-ccHHHHHhhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCcH
Q 000612 1112 KIKDGYNPATWMLEVSAASQEL-----------ALG-IDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSS 1179 (1391)
Q Consensus 1112 ~~~~~~npa~~~l~v~~~~~~~-----------~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1391)
+||++.++|||+.+|++...+. ... .+|++.|.+|+.+++.+..++.-......++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999999832211 111 4799999999999987755433222222333334456899999
Q ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcccCCCCCChhhHHHHHHHHHHHHHHHHHhhhhcccchhh
Q 000612 1180 WIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVS 1259 (1391)
Q Consensus 1180 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~v~~~~~ 1259 (1391)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... ++..+.+.+.|++|+++++..++.++.+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999982 5677899999999999999999888776 6667
Q ss_pred hhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000612 1260 VERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVAL 1339 (1391)
Q Consensus 1260 ~er~v~~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1339 (1391)
+.|+||+|||...+|++++|.++.++.++|+.++.+++|.+|+||++||.++|++||.|+++++++..++.+++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccccCCCCCccchhhhhhhccccc
Q 000612 1340 TPNHHIAAIVSTLFYGLWNVFSGFIIPRPVSLVFPFLFQMLDFFFR 1385 (1391)
Q Consensus 1340 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~y~s~~~~ 1385 (1391)
+++..+|+.++++.+....+++||+||.++||+||+|+.|++++-|
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y 641 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMY 641 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHH
Confidence 9999999999999999999999999999999999998888776544
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-72 Score=721.82 Aligned_cols=810 Identities=20% Similarity=0.269 Sum_probs=461.4
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.-++..+++|+-+.+..+... .+...+.+.+.+...+.++|.+++=+.
T Consensus 483 ~vqa~VS~~Ri~~fl~~~e~~-----~~~~~~~~~~~~~~~i~i~~~sfsW~~--------------------------- 530 (1381)
T KOG0054|consen 483 LVQAKVSLKRLKEFLLSEELD-----PDSVERSPDEAGENAIEIKNGSFSWDS--------------------------- 530 (1381)
T ss_pred HHHHHHHHHHHHHHhcCcccC-----ccccccCCCCCCCceEEEeeeeEecCC---------------------------
Confidence 346788888888877665431 111112344455667888888776432
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNH 237 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 237 (1391)
....+.|+|||++|++|++++|+||.|||||+||.+|.|+++.. +|+|.++| .++||+|++ |
T Consensus 531 ----~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-W 592 (1381)
T KOG0054|consen 531 ----ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-W 592 (1381)
T ss_pred ----CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-H
Confidence 11223899999999999999999999999999999999999876 99999998 499999987 5
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
+.+.||||||.|+..+. ..+|+.+.++|.++++.+++|++| .|.||
T Consensus 593 I~ngTvreNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIG 638 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIG 638 (1381)
T ss_pred hhCCcHHHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceec
Confidence 56789999999998764 478999999999999988888887 49999
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~-~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
++++ +||||||||+++|||++++++|++||+|.|++|+++..+|++ +++.+. .++|+|++ +| ..+..+.+|.|+
T Consensus 639 ErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILV-TH-ql~~L~~ad~Ii 713 (1381)
T KOG0054|consen 639 ERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILV-TH-QLQFLPHADQII 713 (1381)
T ss_pred CCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEE-eC-chhhhhhCCEEE
Confidence 9988 599999999999999999999999999999999999999995 775542 44566654 44 567888999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhh
Q 000612 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQK 473 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 473 (1391)
+|++|+|+..|+++|+.+ .|+++ +.+... +++.. .....+.......+. +. +.......
T Consensus 714 vl~~G~I~~~Gty~el~~~~~~~~~l-------------~~~~~~--~~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~ 775 (1381)
T KOG0054|consen 714 VLKDGKIVESGTYEELLKSGGDFAEL-------------AHEEES--EQEEE-ASEKDLESGESSRES-ES-RSLESLSS 775 (1381)
T ss_pred EecCCeEecccCHHHHHhcchhHHHH-------------hhccch--hhccc-cccccccccccccch-hh-hhhhhhcc
Confidence 999999999999999984 23322 000000 00000 000000000000000 00 00000000
Q ss_pred HHHhhcCCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHH-HHHHHHHHhhcccCCCcc-
Q 000612 474 ISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYI-FKLIQIAF-VAVVYMTLFLRTKMHKDT- 550 (1391)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~-~~~~~~~~-~~li~gt~f~~~~~~~~~- 550 (1391)
..+. .......+...........+.-.|.-. ..+.....-..... +-+..... +..+....|+..+.+...
T Consensus 776 ~~~~-~~~~~~~~~~~~~~ee~~~G~v~~~vY-----~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~ 849 (1381)
T KOG0054|consen 776 EEEK-SKDEKEEEDKLVQEEERETGKVSWSVY-----KKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGED 849 (1381)
T ss_pred cccc-cccccchhhHHHHHHHHhcCEeeHHHH-----HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 0000 000000000000000000011111111 11111101111111 11111111 112222233332322211
Q ss_pred --c--ccccchhh----HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHH
Q 000612 551 --V--TDGGIFAG----ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFL 622 (1391)
Q Consensus 551 --~--~~~~~~~g----~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i 622 (1391)
. .+...|.+ +.+...++.++.++......+.....++. .+-+.+++.|++|+++
T Consensus 850 ~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~------------~ml~~Ilrapm~FFdt------ 911 (1381)
T KOG0054|consen 850 NGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD------------KLLNSILRAPMSFFDT------ 911 (1381)
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHhCcchhcCC------
Confidence 0 11222221 12222222222333222222222112211 1345677888888765
Q ss_pred HHhhcCCCCcHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhH
Q 000612 623 SYYVVGYDSNAGRFFKQYALLLGV---------NQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKK 693 (1391)
Q Consensus 623 ~Y~~~g~~~~~~~f~~~~l~~~~~---------~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~ 693 (1391)
.+.||.+++|...... ..+...+..+++.+ .+++.....+++.++.++.
T Consensus 912 --------TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~---~vi~~~~P~fli~~~pl~v----------- 969 (1381)
T KOG0054|consen 912 --------TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGIL---VVISYVTPWFLIAIIPLGV----------- 969 (1381)
T ss_pred --------CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHH---HHhhHHhHHHHHHHHHHHH-----------
Confidence 4578888887644322 11111112222211 1122221112222222111
Q ss_pred HHHHHHHHcHHHHHHHHHHHHhhcCCccccccCCCc-chhhhhhhhccCccc--------------------ccchhHHH
Q 000612 694 WWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSS-ETLGVQVLKSRGFFA--------------------HEYWYWLG 752 (1391)
Q Consensus 694 ~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~-~~~g~~~L~~~~~~~--------------------~~~~~w~~ 752 (1391)
+||.--.+|...+.-.....+...+....+.. ...|..++++++-.. .....|++
T Consensus 970 ----~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla 1045 (1381)
T KOG0054|consen 970 ----IYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLA 1045 (1381)
T ss_pred ----HHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 22222233333333333333322222111111 123444444443211 00113444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCccccc-----ccCCCCCCCCCCCCCCccccccc
Q 000612 753 LGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLS-----TLGGSSNHNTRSGSTDDIRGQQS 827 (1391)
Q Consensus 753 ~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 827 (1391)
+-.-+.-.++..+.+.+++...... .. .+.+++. .+++...+..+. ..+.++...
T Consensus 1046 ~Rle~ig~~~v~~~al~~vl~~~~~-~~-----------------~g~vGLslsyal~lt~~l~~~vR~--~~elEn~m~ 1105 (1381)
T KOG0054|consen 1046 VRLELLGNLVVLIAALFAVLLPSGL-IS-----------------PGLVGLSLSYALQLTGLLQWLVRQ--SSELENNMV 1105 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCC-CC-----------------cchHHHHHHHHHHHHHHHHHHHHH--HHHHHhcch
Confidence 3321111111111111111111110 00 0001100 000000000000 000000000
Q ss_pred ccchh-hhhh--hhcCCCcCC---CcccCCCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEc
Q 000612 828 SSQSL-SLAE--AEASRPKKK---GMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMG 901 (1391)
Q Consensus 828 ~~~~~-~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 901 (1391)
++++. +..+ .+++...+. ...+| ..+.++|+|++.+|.. +...+|+|||++|+|||++||+|
T Consensus 1106 SVERv~eY~~~~~E~p~~~~~~~pp~~WP-~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVG 1173 (1381)
T KOG0054|consen 1106 SVERVLEYTDIPSEAPLEIEESRPPPSWP-SKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVG 1173 (1381)
T ss_pred hhhHHHHHhcCCCCCCCCCcCCCCCCCCC-CCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeC
Confidence 01110 0000 111111111 11122 3457999999888753 23469999999999999999999
Q ss_pred cCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHH
Q 000612 902 VSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSET 978 (1391)
Q Consensus 902 ~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~ 978 (1391)
++|||||||+++|.+... +.+|+|.|||.++.+ ..+|++++.+||||.+|. +.+|.|.|+..+.
T Consensus 1174 RTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-----------GTvR~NLDPf~e~ 1240 (1381)
T KOG0054|consen 1174 RTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-----------GTVRFNLDPFDEY 1240 (1381)
T ss_pred CCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-----------CccccccCccccc
Confidence 999999999999998765 468999999999876 467889999999988764 3444455666777
Q ss_pred HHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000612 979 RKMFIDEVMELVELNPLRQSLVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1052 (1391)
Q Consensus 979 ~~~~v~~~l~~l~L~~~~~~~vg------~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~ 1052 (1391)
.++.++++||.++|.+...++.+ .+++.++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+
T Consensus 1241 sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~ 1320 (1381)
T KOG0054|consen 1241 SDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIRE 1320 (1381)
T ss_pred CHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHH
Confidence 77889999999999876544332 235689999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1053 TVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1053 ~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
..+ +||||++.|+.+. + ..+|||+||++ |+++++|.+
T Consensus 1321 ~F~-dcTVltIAHRl~T-V-md~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1321 EFK-DCTVLTIAHRLNT-V-MDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred Hhc-CCeEEEEeeccch-h-hhcCeEEEeeC-CeEeecCCh
Confidence 864 7999999999874 4 45899999996 799999997
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.4e-70 Score=731.26 Aligned_cols=224 Identities=28% Similarity=0.412 Sum_probs=192.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+..+|+++.++. +++.+|+|||+.|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4888999887741 12469999999999999999999999999999999999876 4589999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000612 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1012 (1391)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|..+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998777653 233444567889999999998888774 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
||||+||+||+.+|+||||||||+|||+.+++.+++.|+++.++|+|||+|+|+++ ++..+|||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 67789999999985 79999998
Q ss_pred CCCchhhHHHHHH
Q 000612 1093 LGRHSCHLISYFE 1105 (1391)
Q Consensus 1093 ~~~~~~~~~~yF~ 1105 (1391)
. +++..-|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 6 45555443
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.1e-68 Score=725.02 Aligned_cols=211 Identities=22% Similarity=0.304 Sum_probs=179.3
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999999852 12359999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.+ ..+|+.++||||++.++.. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 764 4577899999999998875 9999997531 122 3447888888887643 35556553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 45899999999999999999999999999999999999999999999985 4899999999986 3566999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++.+|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-67 Score=720.59 Aligned_cols=211 Identities=20% Similarity=0.275 Sum_probs=179.0
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++|+||+++|+. +.+.+|+|+|++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999999852 22459999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.+ ..+++.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 4577889999999998874 9999997531 222 3347888888887654 35556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999875 5899999999985 4566999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++.+|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 899999986
No 18
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.2e-67 Score=709.86 Aligned_cols=217 Identities=19% Similarity=0.298 Sum_probs=180.2
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC------------
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 921 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~------------ 921 (1391)
..++|+||+|+|+.. ++..+|+|+|++|+||+++||+|+||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999999632 1236999999999999999999999999999999999976531
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCcH
Q 000612 922 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 922 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
+.+|+|.+||.++.+ ..+++.+|||+|++.+++ .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 148999999998754 457889999999998874 799
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-------LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illL 1031 (1391)
+|||.|+. ++.+. +.++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 22333 33677777776654 347788854 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhcCeEEEEecC---cE-EEEecCC
Q 000612 1032 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GQ-EIYVGPL 1093 (1391)
Q Consensus 1032 DEPTsgLD~~s~~~i~~~l~~~~-~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g---G~-~~y~G~~ 1093 (1391)
|||||+||+.+++.|++.|+++. .+|+|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 46789999999973 66 5588874
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.9e-66 Score=708.81 Aligned_cols=211 Identities=18% Similarity=0.209 Sum_probs=179.3
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 479999999999631 1359999999999999999999999999999999999876 457999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.+ ..+++.++||||++.+++. |++|||.... +.+ ++.++++++.+++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 765 4577889999999999875 9999996211 222 2347888888888654 35556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999875 5899999999985 4667999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++.+|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999986
No 20
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5e-66 Score=611.81 Aligned_cols=491 Identities=26% Similarity=0.330 Sum_probs=374.7
Q ss_pred eEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000612 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1391)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1391)
=++.+||++++... .....+++||||++.+||+++|+|.|||||||+.++
T Consensus 5 lL~V~nL~v~~~~~------------------------------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~ 54 (539)
T COG1123 5 LLEVENLTVEFATD------------------------------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALA 54 (539)
T ss_pred eEEEeceEEEEecC------------------------------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHH
Confidence 47889999998653 122569999999999999999999999999999999
Q ss_pred HhcCCCCC-CCceeEEEEcCccCCCcCc-------cceEEEEcCCC--CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHH
Q 000612 198 LAGKLDPT-LKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELA 267 (1391)
Q Consensus 198 L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~ 267 (1391)
|.|.+++. ...+|+|.++|.++..... .+.++||+|++ .+-|-+||.+.|.-..+.++...
T Consensus 55 i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~--------- 125 (539)
T COG1123 55 LMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS--------- 125 (539)
T ss_pred HhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc---------
Confidence 99999987 4568999999997655443 26799999996 46777899888865444332111
Q ss_pred HHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCcccee
Q 000612 268 RREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFM 347 (1391)
Q Consensus 268 ~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllL 347 (1391)
.+++..++.++|+..||++.... +++++.|||||||||.||+||+.+|++|++
T Consensus 126 ------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LLIa 178 (539)
T COG1123 126 ------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLLIA 178 (539)
T ss_pred ------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEEEE
Confidence 22334567889999999986554 678899999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCC
Q 000612 348 DEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRK 427 (1391)
Q Consensus 348 DEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~ 427 (1391)
||||++||..++.+|.+.|+++.+ ..++.++.++|+..-+.++||+|+||.+|++|+.|+.+++.+.+ .
T Consensus 179 DEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p--------~-- 247 (539)
T COG1123 179 DEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNP--------Q-- 247 (539)
T ss_pred CCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhcc--------C--
Confidence 999999999999999999999875 56677778999999999999999999999999999999886411 0
Q ss_pred ChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCCCccccccccccccccccCcHHHHHHH
Q 000612 428 GVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKA 507 (1391)
Q Consensus 428 ~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 507 (1391)
.||.. .+... .|.
T Consensus 248 -----------------------hpYT~-----------------~Ll~a--~p~------------------------- 260 (539)
T COG1123 248 -----------------------HPYTR-----------------GLLAA--VPR------------------------- 260 (539)
T ss_pred -----------------------CcccH-----------------HHHhh--CCC-------------------------
Confidence 01100 00000 000
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHhhhhhhHH
Q 000612 508 NISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFY 587 (1391)
Q Consensus 508 ~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~ 587 (1391)
....
T Consensus 261 --------------------------------------~~~~-------------------------------------- 264 (539)
T COG1123 261 --------------------------------------LGDE-------------------------------------- 264 (539)
T ss_pred --------------------------------------cccc--------------------------------------
Confidence 0000
Q ss_pred HhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Q 000612 588 KQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVA 667 (1391)
Q Consensus 588 k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia 667 (1391)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCccccccCCCcchhhhhhhhccCcccccc
Q 000612 668 NTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEY 747 (1391)
Q Consensus 668 ~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~ 747 (1391)
..
T Consensus 265 ------------------------------------------------------~~------------------------ 266 (539)
T COG1123 265 ------------------------------------------------------KI------------------------ 266 (539)
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcccccccCCCCCCCCCCCCCCccccccc
Q 000612 748 WYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQS 827 (1391)
Q Consensus 748 ~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1391)
.. . +
T Consensus 267 -----------------------------------------------~~-------------------~--~-------- 270 (539)
T COG1123 267 -----------------------------------------------IR-------------------L--P-------- 270 (539)
T ss_pred -----------------------------------------------cc-------------------c--c--------
Confidence 00 0 0
Q ss_pred ccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCCh
Q 000612 828 SSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGK 907 (1391)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 907 (1391)
. . .. .+ ...-++.+|++-.+..++.+. ....+...+++||||.+++||++||+|+|||||
T Consensus 271 ----~------~-~~------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGK 330 (539)
T COG1123 271 ----R------R-GP------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLVGESGSGK 330 (539)
T ss_pred ----c------c-cc------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEECCCCCCH
Confidence 0 0 00 00 011244555554444322111 000133568999999999999999999999999
Q ss_pred HHHHHhHcCCCCCCeEEEEEEEcCccC--Cc---ccccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHH
Q 000612 908 TTLMDVLAGRKTGGYITGNITISGYPK--KQ---ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRK 980 (1391)
Q Consensus 908 STLl~~L~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~ 980 (1391)
|||.++|+|...+ ..|.|.++|.+. .. ...++.+-+++|++ .+.|.+||++.+.-....... ....+++
T Consensus 331 STlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~ 406 (539)
T COG1123 331 STLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERR 406 (539)
T ss_pred HHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHH
Confidence 9999999998863 579999999762 11 22445666777765 577999999998766544332 2256667
Q ss_pred HHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CC
Q 000612 981 MFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GR 1058 (1391)
Q Consensus 981 ~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~ 1058 (1391)
+++.++++.++|.+ ..+.. +.+||||||||++|||||+.+|++|++|||||.||+..+..|.++|+++.++ |.
T Consensus 407 ~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~ 481 (539)
T COG1123 407 ARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGL 481 (539)
T ss_pred HHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCC
Confidence 78999999999985 34444 4689999999999999999999999999999999999999999999999765 99
Q ss_pred EEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1059 TVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1059 tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|.|+++||.+. +.+.|||+++|++ |++|..||.
T Consensus 482 t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 482 TYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred EEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 99999999874 7788999999985 899999985
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-64 Score=625.60 Aligned_cols=457 Identities=21% Similarity=0.298 Sum_probs=346.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|.++..... ++.++||+|++.+++
T Consensus 19 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 19 KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765432 356999999988899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++......+.. . ..+....++++++.+||++..+..+
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~-~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 141 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIM-D------------------------------YDAMYLRAQKLLAQLKLDINPATPV--- 141 (506)
T ss_pred CCcHHHHhhhcccccccCCc-C------------------------------HHHHHHHHHHHHHHcCCCCCcccch---
Confidence 99999999886532100000 0 0011224677899999987666554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++||.++|+..++.++||+|++|+
T Consensus 142 --~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 142 --GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIR 217 (506)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999998753 3 4556668899999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000612 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 479 (1391)
+|++++.|+.+++.. .+..+.
T Consensus 218 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 238 (506)
T PRK13549 218 DGRHIGTRPAAGMTE--------------------------------------------DDIITM--------------- 238 (506)
T ss_pred CCEEeeecccccCCH--------------------------------------------HHHHHH---------------
Confidence 999998886542200 000000
Q ss_pred CCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhh
Q 000612 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1391)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1391)
+. + .. .
T Consensus 239 -------------------------------------------------------------~~--~--~~-~-------- 244 (506)
T PRK13549 239 -------------------------------------------------------------MV--G--RE-L-------- 244 (506)
T ss_pred -------------------------------------------------------------hh--C--cC-c--------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 000612 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1391)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1391)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000612 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1391)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1391)
+
T Consensus 245 ----------------------------------------------------~--------------------------- 245 (506)
T PRK13549 245 ----------------------------------------------------T--------------------------- 245 (506)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred ccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000612 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1391)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1391)
. .. + . .
T Consensus 246 --------------------------~--------------------------~~-~------------------~---~ 251 (506)
T PRK13549 246 --------------------------A--------------------------LY-P------------------R---E 251 (506)
T ss_pred --------------------------c--------------------------cc-c------------------c---c
Confidence 0 00 0 0 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccC
Q 000612 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1391)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 879 (1391)
. ... ....++++|+++.++.. +
T Consensus 252 ---------------------------------------~-~~~--------~~~~l~~~~l~~~~~~~----------~ 273 (506)
T PRK13549 252 ---------------------------------------P-HTI--------GEVILEVRNLTAWDPVN----------P 273 (506)
T ss_pred ---------------------------------------c-cCC--------CCceEEEecCccccccc----------c
Confidence 0 000 00125566666544210 1
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CC
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IH 952 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~ 952 (1391)
++.+|+|+|++|++||++||+|+||||||||+++|+|...+ +.+|+|.++|.+... ...++.+||++|++ .+
T Consensus 274 ~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 352 (506)
T PRK13549 274 HIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGI 352 (506)
T ss_pred ccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCC
Confidence 23589999999999999999999999999999999997641 147999999976532 12245689999985 46
Q ss_pred CCCCcHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000612 953 SPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1029 (1391)
Q Consensus 953 ~~~lTv~e~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~il 1029 (1391)
++.+||.|++.+....... ...+.++.++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|++|
T Consensus 353 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~ll 427 (506)
T PRK13549 353 VPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKIL 427 (506)
T ss_pred cCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEE
Confidence 7789999999875321111 0012233445688999999996 4666653 579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000612 1030 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1391)
Q Consensus 1030 lLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~ 1095 (1391)
+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |+++..|+..+
T Consensus 428 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 428 ILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred EEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999999999999999888999999999986 57788999999986 79999988653
No 22
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.5e-63 Score=675.18 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=178.9
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 47999999999863 12469999999999999999999999999999999999864 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.+ ..+++.++||||++.+++. |++|||.... .. .++.++++++.++|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 764 4577889999999999875 9999995321 11 23457889999988653 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||+||||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999875 4799999999985 4567999999986
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 799999986
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.4e-64 Score=621.93 Aligned_cols=449 Identities=21% Similarity=0.325 Sum_probs=344.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK10762 18 KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQL 94 (501)
T ss_pred EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 34699999998899999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.|+..........+ ..+...+++++++.+||++..|..++
T Consensus 95 tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 140 (501)
T PRK10762 95 TIAENIFLGREFVNRFGRID------------------------------WKKMYAEADKLLARLNLRFSSDKLVG---- 140 (501)
T ss_pred cHHHHhhhccccccccCccC------------------------------HHHHHHHHHHHHHHcCCCCCccCchh----
Confidence 99999998643210000000 00112345678999999877665554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
.|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. . +++||.++|+.+++.++||+|++|++|
T Consensus 141 -~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~G 217 (501)
T PRK10762 141 -ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRDG 217 (501)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 5999999999999999999999999999999999999999999998753 3 455666889999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000612 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1391)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 481 (1391)
+++..|+.+++.. ++..+.
T Consensus 218 ~i~~~~~~~~~~~--------------------------------------------~~~~~~----------------- 236 (501)
T PRK10762 218 QFIAEREVADLTE--------------------------------------------DSLIEM----------------- 236 (501)
T ss_pred EEEEecCcCcCCH--------------------------------------------HHHHHH-----------------
Confidence 9998776442200 000000
Q ss_pred CccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHH
Q 000612 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1391)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1391)
++ . .. .
T Consensus 237 -----------------------------------------------------------~~--~--~~-~---------- 242 (501)
T PRK10762 237 -----------------------------------------------------------MV--G--RK-L---------- 242 (501)
T ss_pred -----------------------------------------------------------hc--C--CC-c----------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 000612 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1391)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1391)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCcc
Q 000612 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1391)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1391)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000612 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1391)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1391)
.. . .+ .
T Consensus 243 ~~--~------------------------------------------------~~----------------------~-- 248 (501)
T PRK10762 243 ED--Q------------------------------------------------YP----------------------R-- 248 (501)
T ss_pred cc--c------------------------------------------------cc----------------------c--
Confidence 00 0 00 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCce
Q 000612 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1391)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1391)
. . . +..+..++++|++.
T Consensus 249 ------------------------------~------~-~--------~~~~~~l~~~~l~~------------------ 265 (501)
T PRK10762 249 ------------------------------L------D-K--------APGEVRLKVDNLSG------------------ 265 (501)
T ss_pred ------------------------------c------c-c--------CCCCcEEEEeCccc------------------
Confidence 0 0 0 00001245555531
Q ss_pred EEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCC
Q 000612 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSP 954 (1391)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~ 954 (1391)
.+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+.... ..++.+||++|++ .+++
T Consensus 266 ~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~ 343 (501)
T PRK10762 266 PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVL 343 (501)
T ss_pred CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcC
Confidence 26999999999999999999999999999999999865 4579999999775321 2345699999995 4678
Q ss_pred CCcHHHHHHHHHHhcCC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000612 955 FVTIYESLLFSAWLRLS---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr~~---~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~ill 1030 (1391)
.+||.|++.+....... .....++.++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|++|+
T Consensus 344 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lll 418 (501)
T PRK10762 344 GMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLI 418 (501)
T ss_pred CCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999875321110 0112233345688999999995 5666653 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000612 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1391)
Q Consensus 1031 LDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~ 1095 (1391)
|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++ |++++.|+...
T Consensus 419 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 419 LDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999999999999878999999999986 57788999999985 79999988753
No 24
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-64 Score=625.18 Aligned_cols=457 Identities=22% Similarity=0.298 Sum_probs=345.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 19 ~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 95 (510)
T PRK09700 19 HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDEL 95 (510)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998889999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++...... .+.. +..+ ..+...+++++++.+||++..++.++
T Consensus 96 tv~e~l~~~~~~~~~--~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~---- 144 (510)
T PRK09700 96 TVLENLYIGRHLTKK--VCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA---- 144 (510)
T ss_pred cHHHHhhhccccccc--cccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh----
Confidence 999999875321000 0000 0000 00112346778999999877665554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +++||.++|+..++.++||++++|++|
T Consensus 145 -~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~G 221 (510)
T PRK09700 145 -NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKDG 221 (510)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999864 3 455666889999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000612 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1391)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 481 (1391)
++++.|+++++.. .+..+.
T Consensus 222 ~i~~~g~~~~~~~--------------------------------------------~~~~~~----------------- 240 (510)
T PRK09700 222 SSVCSGMVSDVSN--------------------------------------------DDIVRL----------------- 240 (510)
T ss_pred EEeeecchhhCCH--------------------------------------------HHHHHH-----------------
Confidence 9999887654210 000000
Q ss_pred CccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHH
Q 000612 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1391)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1391)
.. + .. ..
T Consensus 241 -----------------------------------------------------------~~--~--~~-~~--------- 247 (510)
T PRK09700 241 -----------------------------------------------------------MV--G--RE-LQ--------- 247 (510)
T ss_pred -----------------------------------------------------------hc--C--CC-cc---------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 000612 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1391)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1391)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCcc
Q 000612 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1391)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1391)
+ .+
T Consensus 248 ---------------------------------------------~---------------------------~~----- 250 (510)
T PRK09700 248 ---------------------------------------------N---------------------------RF----- 250 (510)
T ss_pred ---------------------------------------------c---------------------------cc-----
Confidence 0 00
Q ss_pred ccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000612 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1391)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1391)
+. ..+
T Consensus 251 ----~~----------------------------------------------~~~------------------------- 255 (510)
T PRK09700 251 ----NA----------------------------------------------MKE------------------------- 255 (510)
T ss_pred ----cc----------------------------------------------ccc-------------------------
Confidence 00 000
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCce
Q 000612 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1391)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1391)
.. . ... .+..++++|++..+ .
T Consensus 256 -------------~~----------------------~---~~~------~~~~l~~~~l~~~~---------------~ 276 (510)
T PRK09700 256 -------------NV----------------------S---NLA------HETVFEVRNVTSRD---------------R 276 (510)
T ss_pred -------------cc----------------------c---cCC------CCcEEEEeCccccC---------------C
Confidence 00 0 000 00135666765431 1
Q ss_pred EEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccC---CCCCC
Q 000612 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQN---DIHSP 954 (1391)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~ 954 (1391)
.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|+ ..+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 354 (510)
T PRK09700 277 KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFP 354 (510)
T ss_pred CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcC
Confidence 27999999999999999999999999999999999865 357999999976532 1234568999998 35778
Q ss_pred CCcHHHHHHHHHHhc---CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000612 955 FVTIYESLLFSAWLR---LSP--E-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr---~~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~ 1027 (1391)
.+||.|++.+....+ ... . ......++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+
T Consensus 355 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~ 429 (510)
T PRK09700 355 NFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPE 429 (510)
T ss_pred CCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCC
Confidence 899999998753211 000 0 11222335578999999996 6666653 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1028 illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.+|++++|++ |++++.++.
T Consensus 430 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 430 VIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred EEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999999999999999999999878999999999986 57788999999986 788888865
No 25
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-63 Score=630.83 Aligned_cols=490 Identities=20% Similarity=0.242 Sum_probs=352.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCC----------CcC------c-cce
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----------EFV------P-QRT 227 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 227 (1391)
.++|+||||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999988 999999986431 111 1 236
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHhhhhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 000612 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1391)
Q Consensus 228 ~~yv~Q~d--~~~~~lTVrE~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1391)
+|||+|++ .+++.+||+||+.++.+.. +.. ..+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------------------------------REEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 99999987 5788899999999876432 110 0011234677899
Q ss_pred HcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecC
Q 000612 305 VLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQP 384 (1391)
Q Consensus 305 ~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~ 384 (1391)
.+||++.. ..-++.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++||.++|+
T Consensus 152 ~~gL~~~~--~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~itHd 228 (623)
T PRK10261 152 QVRIPEAQ--TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFITHD 228 (623)
T ss_pred HCCCCChh--hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEEcCC
Confidence 99996411 01124455799999999999999999999999999999999999999999999986533 4556678999
Q ss_pred chhHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHH
Q 000612 385 APETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEA 464 (1391)
Q Consensus 385 ~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~ 464 (1391)
..++.++||+|++|++|++++.|+++++.. -|.+ ++ ...+.+.
T Consensus 229 l~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~-------------------------~~----~~~l~~~ 271 (623)
T PRK10261 229 MGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQH-------------------------PY----TRALLAA 271 (623)
T ss_pred HHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCC-------------------------hh----hhhhhhc
Confidence 999999999999999999999998876521 0000 00 0000000
Q ss_pred HHhchhhhhHHHhhcCCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcc
Q 000612 465 FQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRT 544 (1391)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~ 544 (1391)
. +
T Consensus 272 -------------~--~--------------------------------------------------------------- 273 (623)
T PRK10261 272 -------------V--P--------------------------------------------------------------- 273 (623)
T ss_pred -------------c--C---------------------------------------------------------------
Confidence 0 0
Q ss_pred cCCCcccccccchhhHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000612 545 KMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSY 624 (1391)
Q Consensus 545 ~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y 624 (1391)
.... ..
T Consensus 274 ~~~~--~~------------------------------------------------------------------------ 279 (623)
T PRK10261 274 QLGA--MK------------------------------------------------------------------------ 279 (623)
T ss_pred cccc--cc------------------------------------------------------------------------
Confidence 0000 00
Q ss_pred hhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHH
Q 000612 625 YVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPL 704 (1391)
Q Consensus 625 ~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~ 704 (1391)
T Consensus 280 -------------------------------------------------------------------------------- 279 (623)
T PRK10261 280 -------------------------------------------------------------------------------- 279 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcCCccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccee
Q 000612 705 TYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVI 784 (1391)
Q Consensus 705 ~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~ 784 (1391)
+.......+. .
T Consensus 280 -------------~~~~~~~~~~----~---------------------------------------------------- 290 (623)
T PRK10261 280 -------------GLDYPRRFPL----I---------------------------------------------------- 290 (623)
T ss_pred -------------cccCCccccc----c----------------------------------------------------
Confidence 0000000000 0
Q ss_pred eccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeE
Q 000612 785 TEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYS 864 (1391)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 864 (1391)
. .. .. . .. .+ .. . .. .. +....-++++|+++.
T Consensus 291 --~--~~---~~--~---------------~~-~~------------~~---~-~~-~~------~~~~~~L~~~~l~~~ 322 (623)
T PRK10261 291 --S--LE---HP--A---------------KQ-EP------------PI---E-QD-TV------VDGEPILQVRNLVTR 322 (623)
T ss_pred --c--cc---cc--c---------------cc-Cc------------cc---c-cc-cc------cCCCceEEEeeeEEE
Confidence 0 00 00 0 00 00 00 0 00 00 000113778888887
Q ss_pred eecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc------c
Q 000612 865 VDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------T 938 (1391)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~ 938 (1391)
++..... .. .......+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .
T Consensus 323 y~~~~~~-~~-~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~ 398 (623)
T PRK10261 323 FPLRSGL-LN-RVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQA 398 (623)
T ss_pred EcCCCcc-cc-ccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHH
Confidence 7421000 00 00012469999999999999999999999999999999999875 4579999999865321 2
Q ss_pred ccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHH
Q 000612 939 FARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 939 ~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
+++.++|++|++ .+++.+||.|++.+....+. ....++.++++.++++.++|. +..+.. +..||||||||
T Consensus 399 ~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQR 471 (623)
T PRK10261 399 LRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQR 471 (623)
T ss_pred hcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHH
Confidence 356799999996 47888999999987643321 112334456788999999996 455655 45799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|+||++|+.+|++|||||||+|||+.++..+++.|++++++ |.|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 472 v~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 472 ICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999999765 899999999986 47788999999986 799999986
No 26
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.1e-63 Score=676.63 Aligned_cols=211 Identities=23% Similarity=0.258 Sum_probs=179.7
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..+.|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 22359999999999999999999999999999999999876 457999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.. ..+++.++||||++.++.. |++|||... .+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4578899999999998864 999999531 1222 3458889999988764 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1004 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~-p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 468999999999999999996 89999999999999999999999999875 4799999999975 567899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |+++.+|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.7e-63 Score=618.44 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=174.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEc-Ccc-
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 933 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~- 933 (1391)
++++|+++.++... .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 56677777663100 012469999999999999999999999999999999999865 357999996 532
Q ss_pred --CCc------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccc
Q 000612 934 --KKQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-----LRQSLV 1000 (1391)
Q Consensus 934 --~~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~v 1000 (1391)
... ...++.+||++|++.+++.+||.|++.+...+. ...+..++.++++++.++|.+ ..+..
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988888999999998754321 122333456888999999975 34444
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEE
Q 000612 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1391)
Q Consensus 1001 g~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ 1079 (1391)
+..|||||||||+||++|+.+|+||+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.+|+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 4679999999999999999999999999999999999999999999999764 899999999986 4778899999
Q ss_pred EEecCcEEEEecCC
Q 000612 1080 LMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1080 ll~~gG~~~y~G~~ 1093 (1391)
+|++ |+++..|+.
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 789998875
No 28
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.7e-63 Score=619.22 Aligned_cols=464 Identities=21% Similarity=0.274 Sum_probs=345.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCcCc-------cceEEEEcCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1391)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 459999999999999999999999999999999999998610 128999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHhhhhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc-
Q 000612 236 N--HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC- 311 (1391)
Q Consensus 236 ~--~~~~lTVrE~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 311 (1391)
. +.+.+||+|++.+..... +.. ..+...+++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 00112346778999999752
Q ss_pred --ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHH
Q 000612 312 --ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETY 389 (1391)
Q Consensus 312 --~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~ 389 (1391)
.+. .+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+.+||.++|+..++.
T Consensus 148 ~~~~~-----~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTD-----YPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhh-----CCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 343 34569999999999999999999999999999999999999999999987643 2455666889999999
Q ss_pred hhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch
Q 000612 390 DLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH 469 (1391)
Q Consensus 390 ~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 469 (1391)
++||+|++|++|++++.|+.+++... +. . ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~------------------------------------~~---~--~~-------- 252 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA------------------------------------PT---H--PY-------- 252 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC------------------------------------CC---C--HH--------
Confidence 99999999999999999987654210 00 0 00
Q ss_pred hhhhHHHhhcCCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCc
Q 000612 470 VGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKD 549 (1391)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~ 549 (1391)
. +. ++...
T Consensus 253 -----------------------------------~-----~~----------------------------~~~~~---- 260 (529)
T PRK15134 253 -----------------------------------T-----QK----------------------------LLNSE---- 260 (529)
T ss_pred -----------------------------------H-----HH----------------------------HHHhC----
Confidence 0 00 00000
Q ss_pred ccccccchhhHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Q 000612 550 TVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGY 629 (1391)
Q Consensus 550 ~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1391)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHH
Q 000612 630 DSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQN 709 (1391)
Q Consensus 630 ~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~ 709 (1391)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccc
Q 000612 710 AIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIE 789 (1391)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~ 789 (1391)
+.. .+
T Consensus 261 ----------------~~~----------------------------------------------~~------------- 265 (529)
T PRK15134 261 ----------------PSG----------------------------------------------DP------------- 265 (529)
T ss_pred ----------------ccc----------------------------------------------cc-------------
Confidence 000 00
Q ss_pred ccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecch
Q 000612 790 SNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPE 869 (1391)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 869 (1391)
. . . ... .+.-++++|+++.++...
T Consensus 266 --------------------------~---------------~------~---~~~------~~~~l~~~~l~~~~~~~~ 289 (529)
T PRK15134 266 --------------------------V---------------P------L---PEP------ASPLLDVEQLQVAFPIRK 289 (529)
T ss_pred --------------------------c---------------c------c---CCC------CCCcccccCcEEEeecCc
Confidence 0 0 0 000 000245666766653110
Q ss_pred hhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc------cccceE
Q 000612 870 EMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARIS 943 (1391)
Q Consensus 870 ~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~ 943 (1391)
.. .+ ...+.+.+|+|||++|++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+
T Consensus 290 ~~-~~-~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i 364 (529)
T PRK15134 290 GI-LK-RTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRI 364 (529)
T ss_pred cc-cc-cccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhce
Confidence 00 00 00012469999999999999999999999999999999999863 479999999765321 134568
Q ss_pred EEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHH
Q 000612 944 GYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAV 1020 (1391)
Q Consensus 944 gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~ 1020 (1391)
||++|++ .+++.+||.|++.+....+.. ..+..+.++.++++++.++|. +..+.. +..|||||||||+||+
T Consensus 365 ~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~ 438 (529)
T PRK15134 365 QVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIAR 438 (529)
T ss_pred EEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHH
Confidence 9999996 367889999999886533211 122334456688999999997 455654 3579999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1021 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1021 ~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 439 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 439 ALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999865 899999999986 47788999999986 799999875
No 29
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7e-63 Score=613.97 Aligned_cols=452 Identities=21% Similarity=0.285 Sum_probs=341.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754432 24699999999899999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.|+.... + +....++++++.+||++..+..++
T Consensus 102 tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 139 (510)
T PRK15439 102 SVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG---- 139 (510)
T ss_pred cHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh----
Confidence 9999998753110 0 011235678899999877665554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
.|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ . +.+||.++|+..++.++||+|++|++|
T Consensus 140 -~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 140 -SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999998754 3 455666889999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000612 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1391)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 481 (1391)
++++.|+++++... + ..+.+.. .
T Consensus 217 ~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~~------------~- 239 (510)
T PRK15439 217 TIALSGKTADLSTD---------------D-----------------------------IIQAITP------------A- 239 (510)
T ss_pred EEEEecChHHcCHH---------------H-----------------------------HHHHHhC------------c-
Confidence 99999987653210 0 0000000 0
Q ss_pred CccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHH
Q 000612 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1391)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1391)
..... ....
T Consensus 240 ---------------------------------------------------------------~~~~~-~~~~------- 248 (510)
T PRK15439 240 ---------------------------------------------------------------AREKS-LSAS------- 248 (510)
T ss_pred ---------------------------------------------------------------ccccc-cccc-------
Confidence 00000 0000
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 000612 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1391)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1391)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCcc
Q 000612 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1391)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1391)
.. .
T Consensus 249 --------------------------------------------------~~---------------------------~ 251 (510)
T PRK15439 249 --------------------------------------------------QK---------------------------L 251 (510)
T ss_pred --------------------------------------------------cc---------------------------c
Confidence 00 0
Q ss_pred ccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000612 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1391)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1391)
. ..+ + .
T Consensus 252 ~-----------------~~~---------------------------------~----------------------~-- 257 (510)
T PRK15439 252 W-----------------LEL---------------------------------P----------------------G-- 257 (510)
T ss_pred c-----------------ccc---------------------------------c----------------------c--
Confidence 0 000 0 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCce
Q 000612 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1391)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1391)
. . ...+ ..+.-+..+|++.
T Consensus 258 --------------~----------------~-----~~~~--------~~~~~l~~~~l~~------------------ 276 (510)
T PRK15439 258 --------------N----------------R-----RQQA--------AGAPVLTVEDLTG------------------ 276 (510)
T ss_pred --------------c----------------c-----cccC--------CCCceEEEeCCCC------------------
Confidence 0 0 0000 0011255566541
Q ss_pred EEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCC
Q 000612 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSP 954 (1391)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~ 954 (1391)
.+|+|||++|++|+++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++ .+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~ 354 (510)
T PRK15439 277 EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYL 354 (510)
T ss_pred CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccC
Confidence 14899999999999999999999999999999999865 3579999999865421 1234689999984 4678
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000612 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDE 1033 (1391)
.+|+.|++......+..........++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||+|||
T Consensus 355 ~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDE 429 (510)
T PRK15439 355 DAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDE 429 (510)
T ss_pred CCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECC
Confidence 899999986421111110011222345688999999996 5666653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCC
Q 000612 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1034 PTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~ 1094 (1391)
||+|||+.+...+++.|++++++|.|||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 430 Pt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 430 PTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999888999999999986 57788999999985 7999888664
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.5e-62 Score=611.56 Aligned_cols=457 Identities=19% Similarity=0.276 Sum_probs=342.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 15 ~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 15 KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 499999999999999999999999999999999999886 5 8999999998765332 246999999988899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++......+.... ..+...+++++++.+||++..+ ++
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~----~~ 137 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNV----TR 137 (500)
T ss_pred CCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcc----cC
Confidence 9999999988643210000000 0011234677899999976542 12
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++. . +++||.++|+..++.++||+|++|+
T Consensus 138 ~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 138 PVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred chhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 3446999999999999999999999999999999999999999999998753 3 4556668899999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000612 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 479 (1391)
+|++++.|+.+++.. .+..+
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~---------------- 235 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIIT---------------- 235 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHH----------------
Confidence 999987664321100 00000
Q ss_pred CCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhh
Q 000612 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1391)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1391)
.+. + ..
T Consensus 236 ------------------------------------------------------------~~~--~--~~---------- 241 (500)
T TIGR02633 236 ------------------------------------------------------------MMV--G--RE---------- 241 (500)
T ss_pred ------------------------------------------------------------HHh--C--cc----------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 000612 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1391)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1391)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000612 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1391)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1391)
.+
T Consensus 242 ---------------------------------------------------~~--------------------------- 243 (500)
T TIGR02633 242 ---------------------------------------------------IT--------------------------- 243 (500)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred ccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000612 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1391)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1391)
. . . + . .
T Consensus 244 ------~---------------~-------------------------------~-~------------------~---~ 249 (500)
T TIGR02633 244 ------S---------------L-------------------------------Y-P------------------H---E 249 (500)
T ss_pred ------c---------------c-------------------------------c-c------------------c---c
Confidence 0 0 0 0 0 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccC
Q 000612 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1391)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 879 (1391)
. .+. .+.-++++|+++.++. .+
T Consensus 250 ---------------------------------------~-~~~--------~~~~l~~~~l~~~~~~----------~~ 271 (500)
T TIGR02633 250 ---------------------------------------P-HEI--------GDVILEARNLTCWDVI----------NP 271 (500)
T ss_pred ---------------------------------------c-cCC--------CCceEEEeCCcccccc----------cc
Confidence 0 000 0012556666654310 01
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CC
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IH 952 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~ 952 (1391)
++.+|+|+|++|++||++||+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+
T Consensus 272 ~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l 350 (500)
T TIGR02633 272 HRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGI 350 (500)
T ss_pred cccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCc
Confidence 23589999999999999999999999999999999998642 147999999977532 12345789999995 47
Q ss_pred CCCCcHHHHHHHHHH--hcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000612 953 SPFVTIYESLLFSAW--LRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1029 (1391)
Q Consensus 953 ~~~lTv~e~l~f~a~--lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~il 1029 (1391)
++.+||+|++.++.. ............++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|
T Consensus 351 ~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~ll 425 (500)
T TIGR02633 351 VPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVL 425 (500)
T ss_pred CCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEE
Confidence 888999999987532 111011122334456889999999964 456553 579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1030 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1030 lLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
+|||||+|||+.++..+++.|++++++|.|||+++|+++ ++.+.+|++++|++ |+++..++.
T Consensus 426 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 426 ILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred EEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 999999999999999999999999888999999999986 57788999999985 788887765
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-62 Score=610.94 Aligned_cols=451 Identities=22% Similarity=0.310 Sum_probs=341.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 4999999999999999999999999999999999999988 9999999988753321 35799999998889999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++......+.. + ..+....++++++.+||++..+..+
T Consensus 95 tv~~~l~~~~~~~~~~~~--------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~----- 138 (501)
T PRK11288 95 TVAENLYLGQLPHKGGIV--------------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL----- 138 (501)
T ss_pred CHHHHHHhcccccccCCC--------------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch-----
Confidence 999999885321000000 0 0011234567899999986655544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++||.++|+..++.++||+|++|++|
T Consensus 139 ~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 139 KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998753 3 455666888999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhcCC
Q 000612 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1391)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 481 (1391)
+++..++..+. .+.++..+.
T Consensus 217 ~i~~~~~~~~~-------------------------------------------~~~~~~~~~----------------- 236 (501)
T PRK11288 217 RYVATFDDMAQ-------------------------------------------VDRDQLVQA----------------- 236 (501)
T ss_pred EEEeecCcccc-------------------------------------------CCHHHHHHH-----------------
Confidence 99865421100 000000000
Q ss_pred CccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhhHH
Q 000612 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1391)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1391)
+. . ..
T Consensus 237 -----------------------------------------------------------~~--~--~~------------ 241 (501)
T PRK11288 237 -----------------------------------------------------------MV--G--RE------------ 241 (501)
T ss_pred -----------------------------------------------------------hc--C--CC------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 000612 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1391)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1391)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCCcc
Q 000612 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1391)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1391)
.
T Consensus 242 -------------------------------------------------------------------------------~ 242 (501)
T PRK11288 242 -------------------------------------------------------------------------------I 242 (501)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCCcc
Q 000612 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1391)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1391)
. .. ..
T Consensus 243 ~-----------------------~~---------------------------~~------------------------- 247 (501)
T PRK11288 243 G-----------------------DI---------------------------YG------------------------- 247 (501)
T ss_pred c-----------------------cc---------------------------cc-------------------------
Confidence 0 00 00
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccCce
Q 000612 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1391)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 881 (1391)
. . . .. ..+..++++|+++ .
T Consensus 248 --------------~---------------~------~-~~--------~~~~~l~~~~~~~-----------------~ 266 (501)
T PRK11288 248 --------------Y---------------R------P-RP--------LGEVRLRLDGLKG-----------------P 266 (501)
T ss_pred --------------c---------------c------c-cC--------CCCcEEEEecccc-----------------C
Confidence 0 0 0 00 0011355566542 1
Q ss_pred EEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CCCC
Q 000612 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1391)
Q Consensus 882 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~ 954 (1391)
.+++|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 37999999999999999999999999999999999865 457999999976532 12345689999985 4788
Q ss_pred CCcHHHHHHHHHHhcCCC-C--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000612 955 FVTIYESLLFSAWLRLSP-E--VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr~~~-~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~ill 1030 (1391)
.+|+.|++.+........ . ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++||
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEE
Confidence 899999998753211100 0 01223345678999999994 5666654 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCCCc
Q 000612 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRH 1096 (1391)
Q Consensus 1031 LDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~~~ 1096 (1391)
|||||+|||+.+...+++.|+++++.|.|||+++||+. ++.+.+|++++|++ |++++.|..++.
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 99999999999999999999999888999999999986 57789999999985 789999987643
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-61 Score=597.65 Aligned_cols=450 Identities=19% Similarity=0.283 Sum_probs=339.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 240 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1391)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35999999999999999999999999999999999999998 9999999998754322 3569999999888999
Q ss_pred CCHHHHHHHhhh-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 241 lTVrE~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
+||+||+.++.. ..+.... ..+....++++++.+|+++..+..+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD--------------------------------QDKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccccC--------------------------------HHHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987532 1110000 0001124567889999987666554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..|||||||||+||++|+.+|++|||||||+|||+.+..++.+.|++++. . +.+||.++|+.+++.+.||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4456668899999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000612 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 479 (1391)
+|+++..|+.+++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876542100 000000
Q ss_pred CCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhh
Q 000612 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1391)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1391)
+. + ..
T Consensus 230 -------------------------------------------------------------~~--~--~~---------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MV--G--RS---------- 234 (491)
T ss_pred -------------------------------------------------------------Hh--C--CC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 000612 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1391)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1391)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000612 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1391)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1391)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000612 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1391)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1391)
.. .+ +
T Consensus 236 -----~~---------------------------------------------~~--~----------------------- 240 (491)
T PRK10982 236 -----TQ---------------------------------------------RF--P----------------------- 240 (491)
T ss_pred -----cc---------------------------------------------cc--c-----------------------
Confidence 00 00 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccC
Q 000612 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1391)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 879 (1391)
. . . .. + .+..+.++|+++..
T Consensus 241 ---------------~----------------~------~-~~-------~-~~~~i~~~~l~~~~-------------- 260 (491)
T PRK10982 241 ---------------D----------------K------E-NK-------P-GEVILEVRNLTSLR-------------- 260 (491)
T ss_pred ---------------c----------------c------c-CC-------C-CCcEEEEeCccccc--------------
Confidence 0 0 0 00 0 01136667776541
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCCC---C
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---H 952 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~---~ 952 (1391)
+.+|+|||+.+++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+.. +
T Consensus 261 -~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~ 337 (491)
T PRK10982 261 -QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGI 337 (491)
T ss_pred -CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCc
Confidence 138999999999999999999999999999999999875 4589999999775431 12455899999853 5
Q ss_pred CCCCcHHHHHHHHHH--hcCCCC-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000612 953 SPFVTIYESLLFSAW--LRLSPE-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1391)
Q Consensus 953 ~~~lTv~e~l~f~a~--lr~~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~i 1028 (1391)
++.+|+.++..+... ...... ......++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~i 412 (491)
T PRK10982 338 YAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEI 412 (491)
T ss_pred ccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCE
Confidence 678888777433210 000001 12223345678899999985 445554 457999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCC
Q 000612 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1029 llLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~ 1094 (1391)
|+|||||+|||+.++..+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..++..
T Consensus 413 llLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 413 LMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred EEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999999999999888999999999986 57789999999986 7888877654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2e-60 Score=591.02 Aligned_cols=215 Identities=19% Similarity=0.296 Sum_probs=166.6
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.... ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 377888887763 23589999999999999999999999999999999996531 1479999999764
Q ss_pred Cc----ccccceEEEeccCCCCCC--CCcHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000612 935 KQ----ETFARISGYCEQNDIHSP--FVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1391)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~~~--~lTv~e~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1005 (1391)
.. ...++.+||++|++.+.. ..|+++.+.+...- ....... ...++.++++++.++|.+ ..+.. +
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~ 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----F 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----h
Confidence 21 123467999999875543 35677666543210 1111111 223456889999999987 66665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHH-hcCeEEEEec
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELFLMKR 1083 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g-~tvi~~~Hqps~~i~~-~~D~~~ll~~ 1083 (1391)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++| .|||+++|+++ ++.+ .+|++++|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 5799999999999999999999999999999999999999999999998776 46999999986 4555 4899999986
Q ss_pred CcEEEEec
Q 000612 1084 GGQEIYVG 1091 (1391)
Q Consensus 1084 gG~~~y~G 1091 (1391)
|++++.-
T Consensus 479 -G~i~~~~ 485 (490)
T PRK10938 479 -GDIYRYV 485 (490)
T ss_pred -CceEEee
Confidence 6766653
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.1e-59 Score=518.34 Aligned_cols=470 Identities=24% Similarity=0.315 Sum_probs=364.6
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCcCcc-------ceEEEEcC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFVPQ-------RTAAYISQ 233 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1391)
....++++|||++++||.++|+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3456999999999999999999999999999999999998763 34589999999987544322 47999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000612 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1391)
Q Consensus 234 ~d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1391)
+| .+-|-.|+..-+.-..++..- ..+..++.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 97 466777777776655444311 1122234567788999999876
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhh
Q 000612 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1391)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1391)
.... +.++.+|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++-.+ -+..++.|+|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5433 4678899999999999999999999999999999999999999999999998654 466677799999999999
Q ss_pred cCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhh
Q 000612 392 FDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVG 471 (1391)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 471 (1391)
+|+|+||.+|++|++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998876532 0000 000
Q ss_pred hhHHHhhcCCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCccc
Q 000612 472 QKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTV 551 (1391)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~ 551 (1391)
|.++
T Consensus 255 ---------------------------------------r~Ll------------------------------------- 258 (534)
T COG4172 255 ---------------------------------------RKLL------------------------------------- 258 (534)
T ss_pred ---------------------------------------HHHH-------------------------------------
Confidence 0000
Q ss_pred ccccchhhHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCC
Q 000612 552 TDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDS 631 (1391)
Q Consensus 552 ~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1391)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHH
Q 000612 632 NAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAI 711 (1391)
Q Consensus 632 ~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al 711 (1391)
.+
T Consensus 259 --------------------------~a---------------------------------------------------- 260 (534)
T COG4172 259 --------------------------AA---------------------------------------------------- 260 (534)
T ss_pred --------------------------hc----------------------------------------------------
Confidence 00
Q ss_pred HHHhhcCCccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeecccccc
Q 000612 712 VANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESN 791 (1391)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 791 (1391)
.|.
T Consensus 261 -------------eP~---------------------------------------------------------------- 263 (534)
T COG4172 261 -------------EPS---------------------------------------------------------------- 263 (534)
T ss_pred -------------CCC----------------------------------------------------------------
Confidence 000
Q ss_pred ccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhh
Q 000612 792 EQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEM 871 (1391)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 871 (1391)
+. + . .. .+..+..++.+|+...++.++.+
T Consensus 264 ------g~-------------------~-------------------~-p~------~~~~~~ll~~~~v~v~f~i~~g~ 292 (534)
T COG4172 264 ------GD-------------------P-------------------P-PL------PEDAPVLLEVEDLRVWFPIKGGF 292 (534)
T ss_pred ------CC-------------------C-------------------C-CC------CCCCCceEEecceEEEEecCCcc
Confidence 00 0 0 00 00012335555665555544322
Q ss_pred hhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc------cccceEEE
Q 000612 872 KVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARISGY 945 (1391)
Q Consensus 872 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gy 945 (1391)
-.. ..+...++++||++.++||.+||+|.||||||||=.+|.+... .+|.|.++|.++... .+++.+-.
T Consensus 293 ~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQv 367 (534)
T COG4172 293 LRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQV 367 (534)
T ss_pred ccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceE
Confidence 110 1233579999999999999999999999999999999998765 359999999887532 35677899
Q ss_pred eccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHH
Q 000612 946 CEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLSTEQRKRLTIAVEL 1022 (1391)
Q Consensus 946 v~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lSgGqrqRl~iA~~L 1022 (1391)
|+||+. +.|.+||.|-+.=+.....+ ..+..++++++.++|+.+||++-. +.. +.++|||||||++|||||
T Consensus 368 VFQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAl 441 (534)
T COG4172 368 VFQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARAL 441 (534)
T ss_pred EEeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHH
Confidence 999975 77999999988766555433 567889999999999999998642 332 578999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1023 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1023 ~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
+-+|++++||||||.||..-+.+|+++|+++-+ .|.+-++++||.. -+-.+||++++|++ |++|+.||.
T Consensus 442 iLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 442 ILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred hcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999999999999999999999999964 4999999999986 47789999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.7e-58 Score=575.98 Aligned_cols=201 Identities=20% Similarity=0.288 Sum_probs=163.8
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 488899988763 2469999999999999999999999999999999999865 4579999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000612 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGq 1012 (1391)
..+||++|+. .+++.+||.|++.+....... ... +...+++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 677889999999876422211 111 123456899999964 44554 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEE-Eec
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~-y~G 1091 (1391)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||+++|++. .+...+|++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999986 4778899999998767776 454
Q ss_pred C
Q 000612 1092 P 1092 (1391)
Q Consensus 1092 ~ 1092 (1391)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-58 Score=573.55 Aligned_cols=198 Identities=17% Similarity=0.252 Sum_probs=164.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999988774 2358999999999999999999999999999999999865 45799999873
Q ss_pred CcccccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000612 935 KQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgG 1011 (1391)
+.+||++|+.. +.+.+|+.|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 456789999986421 11 1 1134578899999984 555655 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEE-Ee
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~-y~ 1090 (1391)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||+++|++. .+.+.+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999986 459999999986 47778999999986 5666 87
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.5e-57 Score=569.47 Aligned_cols=201 Identities=18% Similarity=0.273 Sum_probs=163.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 478899988763 2469999999999999999999999999999999999865 4579999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000612 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGq 1012 (1391)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1589999986 46788999999987642211 1111 123557899999964 44554 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEE-Eec
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~-y~G 1091 (1391)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||+++|++. .+...+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 4777899999998767776 444
Q ss_pred C
Q 000612 1092 P 1092 (1391)
Q Consensus 1092 ~ 1092 (1391)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-55 Score=556.31 Aligned_cols=197 Identities=22% Similarity=0.346 Sum_probs=160.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899988773 2469999999999999999999999999999999999875 45799998641
Q ss_pred CcccccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000612 935 KQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgG 1011 (1391)
..+||++|+. .+.+..|+.+++.- . .. ...++.+.++++.+++.+ ..+.. +..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~-----~~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEE-----TRRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCc-----hhhCCHH
Confidence 2589999974 24455677776531 1 11 112345788999999963 45555 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEE-Ee
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~-y~ 1090 (1391)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||+++||+. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999986 47788999999986 6776 88
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.7e-55 Score=555.15 Aligned_cols=202 Identities=23% Similarity=0.329 Sum_probs=162.6
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478899988763 2469999999999999999999999999999999999865 45799988 4321
Q ss_pred CcccccceEEEeccCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000612 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGq 1012 (1391)
.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..+.. +..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 489999975 577889999999875321 0 111 1123467888888885 345554 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe-cCcEEEEec
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGQEIYVG 1091 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~-~gG~~~y~G 1091 (1391)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||+++|++. .+...+|++++|. +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999976 4778899999997 554455555
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 40
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3e-55 Score=547.75 Aligned_cols=211 Identities=20% Similarity=0.235 Sum_probs=171.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|... +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 477888877653 1 24899999999999999999999999999999999875 457999885
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..+.. +..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~-----~~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKN-----VKDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCC-----cccCCHHHHH
Confidence 1489999998888889999999874211 111 12467899999998877766 4579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 4677899999996 3 77777764
Q ss_pred CCc---hhhHHHHHHhC
Q 000612 1094 GRH---SCHLISYFEAI 1107 (1391)
Q Consensus 1094 ~~~---~~~~~~yF~~~ 1107 (1391)
... ...+-.|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 321 12334556665
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-54 Score=509.10 Aligned_cols=451 Identities=23% Similarity=0.371 Sum_probs=349.1
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1391)
...++|+||||++++||+++|+|.||||||||+|+|+|.++|+ +|+|.+||.+.....++ .-|+.|.|+..+.
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3456999999999999999999999999999999999999999 99999999987765553 4689999999999
Q ss_pred CCCCHHHHHHHhhhhcC-CCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 239 GEMTVRETLAFSARCQG-VGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
|++||.|||.++..... .+. + ...+....+..+|+.+|++...++.|+
T Consensus 96 p~LsVaeNifLgre~~~~~g~----i---------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRRFGL----I---------------------------DRKAMRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred CCccHHHHhhcccccccCCCc----c---------------------------CHHHHHHHHHHHHHHcCCCCChhhhhh
Confidence 99999999988754321 000 0 111233456778999999755788877
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
+ ||+||||-|.||||+..+++|++|||||++|+...+..+++.++++. ..+..||.|+|..+|++++||+|.|
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEE
Confidence 5 99999999999999999999999999999999999999999999975 4567777899999999999999999
Q ss_pred EcCCeEEEecCh-hHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHH
Q 000612 398 LSDGQIVYQGPR-ELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISD 476 (1391)
Q Consensus 398 L~~G~iv~~G~~-~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 476 (1391)
|.||+.+..++. .+. +.++..+
T Consensus 218 lRDG~~v~~~~~~~~~--------------------------------------------~~~~lv~------------- 240 (500)
T COG1129 218 LRDGRVVGTRPTAAET--------------------------------------------SEDELVR------------- 240 (500)
T ss_pred EeCCEEeeecccccCC--------------------------------------------CHHHHHH-------------
Confidence 999999876652 211 0000000
Q ss_pred hhcCCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccc
Q 000612 477 ELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGI 556 (1391)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~ 556 (1391)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHH
Q 000612 557 FAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRF 636 (1391)
Q Consensus 557 ~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 636 (1391)
.|+|
T Consensus 241 --------------------------------------------------------------------~MvG-------- 244 (500)
T COG1129 241 --------------------------------------------------------------------LMVG-------- 244 (500)
T ss_pred --------------------------------------------------------------------HhhC--------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhh
Q 000612 637 FKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEF 716 (1391)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef 716 (1391)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccc
Q 000612 717 LGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDR 796 (1391)
Q Consensus 717 ~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1391)
.... .. | +
T Consensus 245 --r~~~-----------------------~~-------------------------~--~-------------------- 252 (500)
T COG1129 245 --RELE-----------------------DL-------------------------F--P-------------------- 252 (500)
T ss_pred --cchh-----------------------hh-------------------------c--c--------------------
Confidence 0000 00 0 0
Q ss_pred cCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhccc
Q 000612 797 IGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGV 876 (1391)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 876 (1391)
. ... . ...+..+++++++.
T Consensus 253 ------------------------------------------~-~~~-~----~~~~~~l~v~~l~~------------- 271 (500)
T COG1129 253 ------------------------------------------E-PPE-E----GIGEPVLEVRNLSG------------- 271 (500)
T ss_pred ------------------------------------------c-ccc-c----CCCCcEEEEecCCC-------------
Confidence 0 000 0 00011234444321
Q ss_pred ccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC--
Q 000612 877 LEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND-- 950 (1391)
Q Consensus 877 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~-- 950 (1391)
...++|+||++++||++||.|-=|||+|-|+++|.|... ...|+|.+||.+.... ..+..++|||.|.
T Consensus 272 ----~~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~ 345 (500)
T COG1129 272 ----GGKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKS 345 (500)
T ss_pred ----CCceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCccccc
Confidence 114799999999999999999999999999999999554 3589999999876432 3456799999984
Q ss_pred -CCCCCCcHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000612 951 -IHSPFVTIYESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLSTEQRKRLTIAVELVANP 1026 (1391)
Q Consensus 951 -~~~~~lTv~e~l~f~a~lr~~~--~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p 1026 (1391)
-++..++|.+|+.++...+... -.+....++.+++..+.+++.... +.. +..||||++|||.|||.|..+|
T Consensus 346 ~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p 420 (500)
T COG1129 346 EGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDP 420 (500)
T ss_pred CcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCC
Confidence 4678899999998873322211 245555566788999999885332 222 4689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1027 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1027 ~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
+||+|||||.|+|..+...|.++|++++++|++||+++.+.. |+..+||||++|++ |+++-.=+.
T Consensus 421 ~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~ 485 (500)
T COG1129 421 KVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDR 485 (500)
T ss_pred CEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEecc
Confidence 999999999999999999999999999999999999999875 79999999999985 787764343
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=5.4e-53 Score=535.82 Aligned_cols=200 Identities=18% Similarity=0.260 Sum_probs=157.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ +++.+|+|+|++|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 488899988873 12358999999999999999999999999999999999865 45799988652
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqr 1013 (1391)
..+||++|+. ...+++.++..+......+ ... ++.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 2345666654322111111 111 244778999999974 44444 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEE-EecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~-y~G~ 1092 (1391)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. +.|||+++|++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999988865 349999999986 47778999999986 6777 7776
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.9e-52 Score=508.00 Aligned_cols=218 Identities=27% Similarity=0.332 Sum_probs=172.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 244 (1391)
+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+. -.++|++|++...+..||.
T Consensus 16 ~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~ 84 (530)
T COG0488 16 RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVL 84 (530)
T ss_pred ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHH
Confidence 45999999999999999999999999999999999999998 999988642 3699999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHH---HHHH-HhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDV---YMKA-IATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~---~~~~-~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1391)
+.+.-+.. ...+...+..... ...++++... +... ...++++.+.+++.++..||++.. ++.++
T Consensus 85 ~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~--- 152 (530)
T COG0488 85 DYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS--- 152 (530)
T ss_pred HHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh---
Confidence 99976542 1122222221111 1122221111 1111 133456777889999999999876 65555
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
.||||||.||+||++|+.+|++|+|||||++||..+..++.+.|++ ..+ ++|+++|++..+.+.|++|+-++.
T Consensus 153 --~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 153 --SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhhheEEecC
Confidence 5999999999999999999999999999999999999999999985 234 566689999999999999999999
Q ss_pred CeE-EEecChhHH
Q 000612 401 GQI-VYQGPRELV 412 (1391)
Q Consensus 401 G~i-v~~G~~~~~ 412 (1391)
|++ .|.|.++..
T Consensus 226 g~l~~y~Gny~~~ 238 (530)
T COG0488 226 GKLTPYKGNYSSY 238 (530)
T ss_pred CceeEecCCHHHH
Confidence 987 577766644
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.7e-50 Score=462.46 Aligned_cols=457 Identities=22% Similarity=0.307 Sum_probs=354.8
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1391)
...+++|||+++++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 456999999999999999999999999999999999999999 99999999987665553 46899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
++||.|||..+..-... .+ ....+...+++++.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------------------------------~~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------------------------------IDRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------------------------------cCHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987632100 00 00112334577889999999888888876
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
||-||||||.|-++|+.+|++|+|||||+-|-+....++++.|++++. . +.+||.|+|-..|+.+.||++-||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~-G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-E-GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999864 4 4556668999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhHHHhhc
Q 000612 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 479 (1391)
.|+++-.-++. + + .+.+++++.
T Consensus 215 ~Gkvvgt~~~~----------------~------------------------~---~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDPV----------------A------------------------E---TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecCC----------------C------------------------C---CCHHHHHHH---------------
Confidence 99986432110 0 0 000110000
Q ss_pred CCCccccccccccccccccCcHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCCcccccccchhh
Q 000612 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1391)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1391)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhcCCCChhhHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 000612 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1391)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1391)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000612 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1391)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1391)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCcchhhhhhhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcceeeccccccccccccCC
Q 000612 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1391)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1391)
.++.. +
T Consensus 240 --------------~~v~~-------------------------------------~----------------------- 245 (501)
T COG3845 240 --------------REVVL-------------------------------------R----------------------- 245 (501)
T ss_pred --------------Ccccc-------------------------------------c-----------------------
Confidence 00000 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhcCCCcCCCcccCCCCceeEEeceeeEeecchhhhhcccccC
Q 000612 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1391)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 879 (1391)
. ...+... .+..++++|++...+.
T Consensus 246 ----------------~----------------------~~~~~~p------g~~vL~V~~L~v~~~~------------ 269 (501)
T COG3845 246 ----------------V----------------------VKPPSTP------GEVVLEVEDLSVKDRR------------ 269 (501)
T ss_pred ----------------c----------------------ccCCCCC------CCeEEEEeeeEeecCC------------
Confidence 0 0000000 0224667777654321
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC-Cc---c-cccceEEEeccCCC---
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK-KQ---E-TFARISGYCEQNDI--- 951 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~-~~---~-~~~~~~gyv~Q~~~--- 951 (1391)
....+++|||++++||++||.|..|-|-+.|+.+|+|..+ ...|+|.++|.+. .. . ..+..++|||.|..
T Consensus 270 ~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~G 347 (501)
T COG3845 270 GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHG 347 (501)
T ss_pred CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCc
Confidence 1357999999999999999999999999999999999764 2359999999986 21 1 23346899999864
Q ss_pred CCCCCcHHHHHHHHHHhcC----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000612 952 HSPFVTIYESLLFSAWLRL----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1391)
Q Consensus 952 ~~~~lTv~e~l~f~a~lr~----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~ 1027 (1391)
+.+.+|+.||+.+...-+. ..-.+..+.+++..++++.++....... ...+.||||++||+-+||+|..+|+
T Consensus 348 lv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~ 423 (501)
T COG3845 348 LVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPD 423 (501)
T ss_pred cccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCC
Confidence 4578999999987643211 1124556677888999999988632211 1246899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCC
Q 000612 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1028 illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~ 1094 (1391)
+|+..+||.|||..+.+.|.+.|.+.++.|+.|++++-+.+ ++++++|+|.+|.+ |+++...++.
T Consensus 424 lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 424 LLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred EEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999999999999999999999999999999987 79999999999985 7998888764
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-44 Score=371.67 Aligned_cols=220 Identities=25% Similarity=0.409 Sum_probs=186.9
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc----CccceEEEEcCCCCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----VPQRTAAYISQHDNHIG 239 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 239 (1391)
...+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+.++||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 356999999999999999999999999999999999999998 99999999765321 23578999999999999
Q ss_pred CCCHHHHHHHhhhh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
++||.||+..+... ++ ...++++.+..++|+.+||.+.+|.+
T Consensus 91 HlTvleNv~lap~~v~~----------------------------------~~k~eA~~~A~~lL~~VGL~~ka~~y--- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVKK----------------------------------LSKAEAREKALELLEKVGLADKADAY--- 133 (240)
T ss_pred cchHHHHHHhhhHHHcC----------------------------------CCHHHHHHHHHHHHHHcCchhhhhhC---
Confidence 99999999986421 11 11223445667889999999988754
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+.+|||||||||+|||||+.+|+++++|||||+|||....++.+.+++++. .+ .+.+.++|....+-+.+|||+.|
T Consensus 134 --P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eG-mTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 134 --PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred --ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cC-CeEEEEechhHHHHHhhheEEEe
Confidence 557999999999999999999999999999999999999999999999985 44 55555889999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 000612 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~ 435 (1391)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 455666666677654
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=8.5e-43 Score=401.66 Aligned_cols=203 Identities=20% Similarity=0.260 Sum_probs=156.1
Q ss_pred CceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCc
Q 000612 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1391)
Q Consensus 853 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1391)
|..+.++|+++.++. +..++++++|-|.+++.+|++||||+|||||||++.|... +..|.+.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 345788999988762 2358999999999999999999999999999999999875 34676653322
Q ss_pred cCCcccccceEEEeccC--CCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 933 PKKQETFARISGYCEQN--DIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~--~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
. .+++..|+ +.+.-..++.|+++=. ..++.+.+.+..++..+||..-.+... .+.||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVP----MSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccc----hhhccc
Confidence 1 12233333 2222234566655411 111334556788999999985544431 578999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||+||..|+.++..|.||+|||||+|||..+...+-++|.+. ..+||+++||-.. |-..++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999999875 4689999999764 77888999999999999999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 873
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-43 Score=364.97 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=188.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|++.++ +...+|+|||++|++||+++|+|||||||||||+||.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5677887666 34689999999999999999999999999999999999876 56899999996542
Q ss_pred ----cccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 936 ----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
-...|+.+|+|+|+..+||++||.||+.++...- ...++++.++...+.|+.+||.+.+|.. +..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2356788999999999999999999999875332 2345667777788999999999999887 4679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|||||+|||||+.+|+++++|||||.|||+....|.+.++++++.|.|.||+||.... .-+.+||++.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999875 5678899999985 8999999
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 76
No 48
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-42 Score=364.04 Aligned_cols=210 Identities=27% Similarity=0.413 Sum_probs=185.2
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 240 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1391)
++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+.+. ++.+|||-|.-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 355999999999999999999999999999999999999999 9999999999887654 6889999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000612 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 241 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1391)
+||.|||.+--.+++.+. ++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 999999998766665321 2234578999999999752 133577
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
+++|||||+|||.+||||+.+|+|++||||+++||+.++.++.+.++++-+.. +++||.++|+.+|++.++|||.+|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecC
Confidence 88999999999999999999999999999999999999999999998875544 45566689999999999999999999
Q ss_pred CeEEEecChhHHHH
Q 000612 401 GQIVYQGPRELVLE 414 (1391)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1391)
|+++..+++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-42 Score=374.29 Aligned_cols=224 Identities=29% Similarity=0.381 Sum_probs=193.8
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDN 236 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1391)
....+|+|||++|++|++.+|+|+||||||||++++.++..|+ +|+|.++|.++..+.. ++.||+++|+.+
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999999 9999999988766543 478999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1391)
++...||.||++|+.+..+.. ..+.+.++.++|+.+||++.+|.+
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999998776531 123456788999999999887754
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++-++. +.+|+.++|.++-+-+.||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 55799999999999999999999999999999999999999999999987654 5566668899999999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 000612 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~ 437 (1391)
+|++|+++++|+..++ |..|.+.-...|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 34565555556665544
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4e-41 Score=387.04 Aligned_cols=223 Identities=30% Similarity=0.430 Sum_probs=193.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|++..+. .++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCc
Confidence 55667766553 13679999999999999999999999999999999999876 46899999998765
Q ss_pred c--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+..+.. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 4567889999999999999999999999999987543 44566799999999999855544 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g-~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+||+||+++|++|||||||+|||+.++..+++.|++++++| +||+++||+++ ++...||++++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999985 89999997
Q ss_pred CCCchhhHHHHHHh
Q 000612 1093 LGRHSCHLISYFEA 1106 (1391)
Q Consensus 1093 ~~~~~~~~~~yF~~ 1106 (1391)
. .++...+..
T Consensus 221 ~----~~l~~~~~~ 230 (293)
T COG1131 221 P----EELKEKFGG 230 (293)
T ss_pred H----HHHHHhhcc
Confidence 6 455555544
No 51
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-41 Score=385.01 Aligned_cols=217 Identities=30% Similarity=0.448 Sum_probs=193.6
Q ss_pred eeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc-ceEEEEcCCCCCCCCCCHHH
Q 000612 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTVrE 245 (1391)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999999 99999999999998875 88999999999999999999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.|+.+.++.. .++.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 999999876531 122345788899999999988754 56799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1391)
|||||||++||||+.+|++++||||+|.||...+.++...|+++-+ .-++++|.++|+..|+..++|+|.+|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999998644 455666678999999999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChHHHHH
Q 000612 406 QGPRELVLEFFASMGFRCPKRKGVADFLQ 434 (1391)
Q Consensus 406 ~G~~~~~~~~f~~~G~~cp~~~~~adfl~ 434 (1391)
.|++.++ |..|.+.-+|+|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 44577777777753
No 52
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-42 Score=411.64 Aligned_cols=255 Identities=22% Similarity=0.394 Sum_probs=209.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCC---CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhH
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL---PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1391)
..+..-..+|+++.+|..|. + +.-|... .+..|+|+||++.|..
T Consensus 431 lmkgvGAs~rvFel~dr~P~-----i----~~~G~~~p~~~~G~IeF~~VsFaYP~------------------------ 477 (716)
T KOG0058|consen 431 LMKGVGASERVFELMDRKPR-----I----PLTGTLAPDHLQGVIEFEDVSFAYPT------------------------ 477 (716)
T ss_pred HHHhcchHHHHHHHhccCCC-----C----CCCCccccccccceEEEEEeeeecCC------------------------
Confidence 34556677899998887775 2 2224433 4678999999999842
Q ss_pred hhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEE
Q 000612 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1391)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1391)
+ ++.+||||+||+|+|||.|||+||||+||||+.++|..+++|+ +|+|++||+|+.++++ ++.||+|
T Consensus 478 ------R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V 547 (716)
T KOG0058|consen 478 ------R-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLV 547 (716)
T ss_pred ------C-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeee
Confidence 2 3467999999999999999999999999999999999999999 9999999999998876 4889999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000612 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1391)
Q Consensus 232 ~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1391)
.|+|.+|. .||+|||.|+.. ....+.+.++++....+ +. +.++++.
T Consensus 548 ~QEPvLFs-~sI~eNI~YG~~----~~t~e~i~~AAk~ANah--------------------------~F---I~~~p~g 593 (716)
T KOG0058|consen 548 GQEPVLFS-GSIRENIAYGLD----NATDEEIEAAAKMANAH--------------------------EF---ITNFPDG 593 (716)
T ss_pred eccceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhChH--------------------------HH---HHhCccc
Confidence 99998775 699999999864 22233344343333221 11 4578999
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhh
Q 000612 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1391)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1391)
+||.||+++. .||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ ++|+++ |.| +-++.+.
T Consensus 594 Y~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAH-RLSTV~~ 668 (716)
T KOG0058|consen 594 YNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAH-RLSTVRH 668 (716)
T ss_pred cccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eeh-hhhHhhh
Confidence 9999999877 5999999999999999999999999999999999999999999988653 355544 444 5788999
Q ss_pred cCeEEEEcCCeEEEecChhHHHH
Q 000612 392 FDDIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|+|+++++|++++.|+++|+++
T Consensus 669 Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 669 ADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred ccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999975
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-41 Score=367.75 Aligned_cols=218 Identities=23% Similarity=0.332 Sum_probs=191.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+++++++..+... ..+...+|+|||++|++||++||+|.||||||||++++.+... +.+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 4677776555421 1123579999999999999999999999999999999999876 56899999997654
Q ss_pred c------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
. ..+++.+|+++|+..++...||+||+.|...+.. .++++++++|.+.++.+||.+..+.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 3 2467889999999999999999999999977764 56788999999999999999988876 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
|||||||+|||||+.+|+||++|||||.|||++.+.|+++|+++.++ |.||+++||+++. +-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999755 9999999999864 7788999999985 8999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99986
No 54
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-41 Score=365.12 Aligned_cols=217 Identities=26% Similarity=0.428 Sum_probs=185.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ .+ .+|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 578999999885 22 59999999999999999999999999999999999766 4689999999876
Q ss_pred CcccccceEEEeccCCCC--CCCCcHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQETFARISGYCEQNDIH--SPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~--~~~lTv~e~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
....-+..+|||||...+ ...+||+|-+..+..-+.. .... ++.++.++++|+.+|+.+++|..+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654445689999996532 2348999999876433221 1122 3336779999999999999999865 6999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||+|||.|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.+.||++++|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 5889999999997 589999
Q ss_pred cCCCC
Q 000612 1091 GPLGR 1095 (1391)
Q Consensus 1091 G~~~~ 1095 (1391)
||+.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99853
No 55
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.5e-41 Score=371.42 Aligned_cols=210 Identities=34% Similarity=0.468 Sum_probs=180.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc---ceEEEEcCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEM 241 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1391)
+++|+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 45999999999999999999999999999999999999998 99999999998877653 7899999998888899
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+|-+.+++.-.- +. .. ...++....++..|+.+|+.+.++..+.
T Consensus 92 tV~d~V~~GR~p~~-~~-----------------~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~---- 137 (258)
T COG1120 92 TVYELVLLGRYPHL-GL-----------------FG------------RPSKEDEEIVEEALELLGLEHLADRPVD---- 137 (258)
T ss_pred EEeehHhhcCCccc-cc-----------------cc------------CCCHhHHHHHHHHHHHhCcHHHhcCccc----
Confidence 99999998853210 00 00 0011122357888999999998886654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
.|||||||||.|||||+++|++|+||||||+||...+.++++.++++.+.. +.+||.++|+...+..+||++++|++|
T Consensus 138 -~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 138 -ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred -ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999998644 455555788999999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
+++.+|++++++
T Consensus 216 ~i~a~G~p~evl 227 (258)
T COG1120 216 KIVAQGTPEEVL 227 (258)
T ss_pred eEEeecCcchhc
Confidence 999999998775
No 56
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-41 Score=385.35 Aligned_cols=223 Identities=30% Similarity=0.436 Sum_probs=197.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCH
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1391)
..+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+|||
T Consensus 18 ~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV 94 (352)
T COG3842 18 FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTV 94 (352)
T ss_pred eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcH
Confidence 46999999999999999999999999999999999999999 9999999999998877 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.|+.+.++... ..+.+.+++++|+.++|++.++ +.+.+
T Consensus 95 ~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~q 136 (352)
T COG3842 95 EENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPHQ 136 (352)
T ss_pred HHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChhh
Confidence 999999987432111 1123457889999999998766 45567
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+|||||+.+|++|+||||.|+||..-+.++...|+++.+.. +.+.|.++|+..|+..++|+|.+|++|+|
T Consensus 137 LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I 215 (352)
T COG3842 137 LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRI 215 (352)
T ss_pred hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCce
Confidence 99999999999999999999999999999999999999999999987655 55666689999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 000612 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1391)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v~ 437 (1391)
...|+++++ |..|...-+|+|+-+..
T Consensus 216 ~Q~gtP~ei--------Y~~P~~~fVA~FiG~~N 241 (352)
T COG3842 216 EQVGTPEEI--------YERPATRFVADFIGESN 241 (352)
T ss_pred eecCCHHHH--------hhCcchHHHHHHhCcce
Confidence 999999998 56788888889887543
No 57
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.6e-41 Score=352.57 Aligned_cols=231 Identities=26% Similarity=0.376 Sum_probs=199.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+++++++.+. +.+.+++|||++|++||+++||||||+||||||++|.|... +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 57888887765 45789999999999999999999999999999999999876 4689999999886
Q ss_pred Cc------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000612 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 1007 (1391)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 1007 (1391)
.+ ...++++|+++|+-.+|..+||+||+.|.. |...+.+++..++.+..-|+.+||... .+.. +.+
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 135678999999999999999999999863 444556777778888888999999877 5554 578
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||+|||++|||||+.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 999999999987 58999999999996 79
Q ss_pred EEEecCCCC----chhhHHHHHHhCCC
Q 000612 1087 EIYVGPLGR----HSCHLISYFEAIPG 1109 (1391)
Q Consensus 1087 ~~y~G~~~~----~~~~~~~yF~~~~g 1109 (1391)
++..|+..+ .-.-+.+||....+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 999999742 11345678876543
No 58
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-40 Score=366.12 Aligned_cols=218 Identities=27% Similarity=0.402 Sum_probs=188.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++.+|+++.|+ ++.+|+|+|+++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367889999885 3579999999999999999999999999999999999776 4589999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..+++.++|+||.......+||+|.+.++..-.... ....++.++.++++|+.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 457789999999998888999999999874321111 1112333447999999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||+.|||||+++|+||+||||||+||...+..++++++++++ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999985 7789999999985 89999
Q ss_pred ecCCC
Q 000612 1090 VGPLG 1094 (1391)
Q Consensus 1090 ~G~~~ 1094 (1391)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99974
No 59
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=356.06 Aligned_cols=194 Identities=27% Similarity=0.410 Sum_probs=170.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 244 (1391)
..+|+|+|++|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 45999999999999999999999999999999999999998 999999999873 3567899999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+....+... .+...+++++|+.+||.+..| .++++|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987654211 112235788899999998776 456679
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC--Ce
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD--GQ 402 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~--G~ 402 (1391)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.+|+.++|+.+|+..++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 9999999999999999999999999999999999999999998887654 45566689999999999999999998 44
Q ss_pred E
Q 000612 403 I 403 (1391)
Q Consensus 403 i 403 (1391)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 5
No 60
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-40 Score=349.40 Aligned_cols=209 Identities=26% Similarity=0.385 Sum_probs=178.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1391)
+.|++|||++|++||+++|+|||||||||||++|.|++.|+ +|+|.++|.++.+... ++++|+++|+-.+|
T Consensus 21 ~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALF 97 (263)
T COG1127 21 RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALF 97 (263)
T ss_pred EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccc
Confidence 45999999999999999999999999999999999999999 9999999999876543 36799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
..+||+||+.|..+-... +|+ ...+..+..-|+..||... +++
T Consensus 98 ssltV~eNVafplre~~~-------------------lp~--------------~~i~~lv~~KL~~VGL~~~----~~~ 140 (263)
T COG1127 98 SSLTVFENVAFPLREHTK-------------------LPE--------------SLIRELVLMKLELVGLRGA----AAD 140 (263)
T ss_pred cccchhHhhheehHhhcc-------------------CCH--------------HHHHHHHHHHHHhcCCChh----hhh
Confidence 999999999997643210 111 1122234445788899754 345
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
.++.+||||+|||+++|||++.+|+++|+||||+|||+.++..+.+.++++.... +.++++++|+.++++..+|++++|
T Consensus 141 ~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L 219 (263)
T COG1127 141 LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVL 219 (263)
T ss_pred hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEE
Confidence 6778899999999999999999999999999999999999999999999887654 455556899999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000612 399 SDGQIVYQGPRELVLE 414 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1391)
.+|+|+..|+++++.+
T Consensus 220 ~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 220 ADGKVIAEGTPEELLA 235 (263)
T ss_pred eCCEEEEeCCHHHHHh
Confidence 9999999999999864
No 61
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-41 Score=363.38 Aligned_cols=223 Identities=30% Similarity=0.453 Sum_probs=188.8
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCc---cCCCcCc-cceEEEEcCCCCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH---DMDEFVP-QRTAAYISQHDNHIG 239 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1391)
...+++|||++|+.||+++|+|||||||||||++|+|+..|+ +|+|.+||. +.++... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 455899999999999999999999999999999999999999 999999999 6655433 388999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.|||.+||+|+.+++... |+ ..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~~-------------------p~-------------~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKER-------------------PS-------------EAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhcccccccC-------------------CC-------------hhhHHHHHHHHHHHhcccchhh-----c
Confidence 999999999998765210 10 1123456888999999987655 6
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
++.+|||||||||++||||+..|++|+||||+++||..-+..+.+.|+++.... +.+.+.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEec
Confidence 677899999999999999999999999999999999999999999999875543 4555568999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 000612 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~ 435 (1391)
+|+|...||++++. ..|...-+..|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999984 34555555555543
No 62
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-40 Score=354.37 Aligned_cols=204 Identities=25% Similarity=0.371 Sum_probs=180.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++++++++. ...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 366778877764 2579999999999999999999999999999999999876 4689999999887
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
. .....+|||+|++.++|.+||+||+.|+...+. .+.+++++++++.++.+||.+..|.. +..|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 3 234678999999999999999999999876654 34566667899999999999999887 4689999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
||+|||||+.+|+||+||||.+.||+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999864 4899999999987 677889999999864
No 63
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.3e-40 Score=376.58 Aligned_cols=212 Identities=34% Similarity=0.497 Sum_probs=184.5
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc--CccceEEEEcCCCCCCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1391)
.+.+|+||||++++|++++|+||||||||||+|+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 367999999999999999999999999999999999999998 99999999887542 3357899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+|||.|.+++.+... .....+++++++.+||++..+ ..+
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~-----~~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKAN-----KKV 134 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhC-----cch
Confidence 99999999998875421 011235788999999998444 345
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++. .++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~-~g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAK-EGGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHh-CCCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999999876 34356666788899999999999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 000612 402 QIVYQGPRELVLEFFAS 418 (1391)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1391)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776543
No 64
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-40 Score=349.28 Aligned_cols=220 Identities=26% Similarity=0.327 Sum_probs=186.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++-.++ +++++|+|||++|++||++||+|+|||||||||++|.|... +..|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888877764 35689999999999999999999999999999999999765 4589999999764
Q ss_pred Cc------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000612 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRL-----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1391)
Q Consensus 935 ~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 1003 (1391)
.. ..+++.+||++|+..+.+.+||.+|++.+..-+. -.....++.+...-++|+.+|+.+.+-...
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 3467889999999999999999999987632111 112233444556778999999998877663
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
..|||||+|||+|||+|+.+|+||+.|||+++|||.+++.||+.|++++++ |.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 579999999999999999999999999999999999999999999999754 9999999999875 668999999998
Q ss_pred cCcEEEEecCCCC
Q 000612 1083 RGGQEIYVGPLGR 1095 (1391)
Q Consensus 1083 ~gG~~~y~G~~~~ 1095 (1391)
. |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999853
No 65
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.5e-35 Score=397.34 Aligned_cols=216 Identities=22% Similarity=0.358 Sum_probs=187.1
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++.+|++..++. +++.+|+|+|+.+++||+++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46889999887741 23569999999999999999999999999999999999876 458999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++.++.++++++.++|.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876653 223344567899999999998887764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|+++. +|+|||++||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57778999999986 7999999
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 85
No 66
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-39 Score=351.71 Aligned_cols=193 Identities=28% Similarity=0.440 Sum_probs=167.8
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc------cccc-ceEEEeccCCCCC
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFA-RISGYCEQNDIHS 953 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~-~~~gyv~Q~~~~~ 953 (1391)
..+|++||++|++||+++|||||||||||||++|.|...+ .+|.+.++|.+... ..++ +.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998763 68999999976542 1233 5699999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000612 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1391)
Q Consensus 954 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLD 1032 (1391)
|.+||.||+.+...+.... ...+++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876555332 2255667889999999987665 43 4689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1033 EPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
|||.+||+.++..|++.+++++++ |+|||++|||| ++...+||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999865 99999999997 5788999999999753
No 67
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-40 Score=348.27 Aligned_cols=213 Identities=26% Similarity=0.366 Sum_probs=189.5
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++|+||+..+. ++.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|.+||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 56788876553 4579999999999999999999999999999999999876 46899999999876
Q ss_pred c---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 000612 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~lSg 1010 (1391)
. ..+||.+|||-|+-.+||++||.||+.+-..+. ..++++.+++++|.|+.+||.+ +.++. +..|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 5 457899999999999999999999998765553 3567788889999999999975 66665 578999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||+|||.+||||+++|+||+||||++.|||-++..+++.++++.++ |+|||++|||.. |.+.+.||+.+|+ +|+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999999765 999999999987 6889999999998 579998
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
++++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8886
No 68
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-40 Score=339.54 Aligned_cols=221 Identities=26% Similarity=0.392 Sum_probs=177.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNH 237 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1391)
+.+|+|||+.|+++++||++|||||||||||++|.+..+. ..+++|+|.++|+++.+.. .++.+|+|+|.|+-
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 3499999999999999999999999999999999988654 4678999999999875532 35889999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-cccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1391)
|| +|++||+.|+.+..|... +.+.+ +++..|+.-+|-+ ..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHh-
Confidence 99 999999999999887532 11111 2222233322211 11211
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
++...+|||||+||++|||||+-+|+||+||||||+||+.++..|-+.+.++. ..-+|+.++|.+.++.+..|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhhh
Confidence 12344799999999999999999999999999999999999999999999874 34555568899999999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000612 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl 433 (1391)
.+..|++|+.|+.+++ |..|.++...||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999987 4456666666654
No 69
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.9e-40 Score=410.64 Aligned_cols=258 Identities=27% Similarity=0.372 Sum_probs=210.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.|+.+...+|+.++.+.++|.-..+. ....+....+++|+|+++.+...
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~~-------------------------- 484 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGPD-------------------------- 484 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCCC--------------------------
Confidence 78999999999999999887322110 12333446789999999998531
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
...+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||+++++.++ ++.++||+|+
T Consensus 485 ------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 485 ------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred ------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 125999999999999999999999999999999999999998 9999999999887765 5889999997
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+ ++.+.||+||+.++. +....+.+.++++....+ + -+..++..+||
T Consensus 556 ~-~Lf~gSI~eNi~l~~----p~~~~e~i~~A~~~ag~~--------------------------~---fI~~lP~gy~t 601 (709)
T COG2274 556 P-FLFSGSIRENIALGN----PEATDEEIIEAAQLAGAH--------------------------E---FIENLPMGYDT 601 (709)
T ss_pred c-hhhcCcHHHHHhcCC----CCCCHHHHHHHHHHhCcH--------------------------H---HHHhccccccc
Confidence 6 555689999999865 223333444444332211 1 14568999999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.++..|.+.|.+.. .++|+|++. | +..+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~Ia-H-Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIA-H-RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEE-c-cchHhhhccE
Confidence 9998665 799999999999999999999999999999999999999999999864 356666544 3 4678999999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|+||++|+|+.+|+++|+++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999986
No 70
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=352.93 Aligned_cols=208 Identities=27% Similarity=0.443 Sum_probs=175.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCC--CCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHD--NHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1391)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+..+...+..||||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 3999999999999999999999999999999999999998 999999999887776667899999953 34445899
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+|.+..+..-+. + ..... ..+.+..+++.|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~-g----~~~~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK-G----WFRRL-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc-c----ccccc-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999988742211 0 00000 111234688899999999999988875
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|.+.|+++.+. +.+|++++|+...+.+.||+|+.|+. ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-ee
Confidence 9999999999999999999999999999999999999999999998653 55666689999999999999999975 68
Q ss_pred EEecChhHHHH
Q 000612 404 VYQGPRELVLE 414 (1391)
Q Consensus 404 v~~G~~~~~~~ 414 (1391)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999988753
No 71
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-39 Score=340.67 Aligned_cols=215 Identities=26% Similarity=0.383 Sum_probs=179.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1391)
+++|+|||+.|++||+++|+|||||||||||++|.|+.+++ +|+|.+||.++..... ++.+||++|+.++.
T Consensus 17 ~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv 93 (258)
T COG3638 17 HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLV 93 (258)
T ss_pred ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcc
Confidence 46999999999999999999999999999999999999998 9999999988765542 36899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||.+|+..+..-+. .... .-.+..+ ++.+..+-+.|+.+|+.+.+.+..+
T Consensus 94 ~r~sv~~NVl~grl~~~--s~~~---------slfglfs---------------k~dk~~Al~aLervgi~~~A~qra~- 146 (258)
T COG3638 94 PRLSVLENVLLGRLGYT--STWR---------SLFGLFS---------------KEDKAQALDALERVGILDKAYQRAS- 146 (258)
T ss_pred cccHHHHHHHhhhcccc--hHHH---------HHhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHhc-
Confidence 99999999998753221 0100 0111111 1223345567999999988877665
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
.|||||+|||+|||||+.+|++++-|||+++||+.++.++++.|++.....+.|+|+ .+|..+-+.++||||+-|
T Consensus 147 ----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Riigl 221 (258)
T COG3638 147 ----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRIIGL 221 (258)
T ss_pred ----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhheEe
Confidence 499999999999999999999999999999999999999999999998766656555 566788999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000612 399 SDGQIVYQGPRELVLE 414 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1391)
++|+|+|+||++++-+
T Consensus 222 ~~G~ivfDg~~~el~~ 237 (258)
T COG3638 222 KAGRIVFDGPASELTD 237 (258)
T ss_pred cCCcEEEeCChhhhhH
Confidence 9999999999988654
No 72
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-40 Score=335.62 Aligned_cols=201 Identities=28% Similarity=0.370 Sum_probs=183.8
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCcH
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
.++++||||+++.||++||+|+|||||||+|++|++... +.+|.|.++|.+... ...++.+|.++.+-.++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 358999999999999999999999999999999999876 468999999998654 4567889999988888999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
+|||.|.+.+.. ..+.+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 999999998763 4566778889999999999999999875 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|..+...+.+.++++.+.|++||+++|..+ ++.++||++++|.+ |++++.|..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 999999999999999888999999999985 78889999999996 799999986
No 73
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=354.40 Aligned_cols=205 Identities=29% Similarity=0.448 Sum_probs=185.3
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCc---cCCc-ccccceEEEeccCCCCCCC
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 955 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~~ 955 (1391)
...+++|||+.|+.||++||+|||||||||||++|||..+ +..|.|.+||. +.++ ..-.|.+|||+|+..+|+.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999887 46899999998 5444 3345789999999999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000612 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1391)
Q Consensus 956 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPT 1035 (1391)
+||.||+.|+..++ ...++..+.+.+++|.|+.++|+++.+.. +..|||||||||++||||+.+|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998777 33455677788899999999999999887 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCC
Q 000612 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1036 sgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~ 1094 (1391)
++||+.-+..+.+.|+++.+. |.|+|++|||+. +..+.+||+++|++ |++.-.||+.
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999876 999999999986 79999999999986 7999999873
No 74
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-40 Score=334.27 Aligned_cols=206 Identities=32% Similarity=0.377 Sum_probs=182.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1391)
.++++||||.++.||+++|+|||||||||+|++|++++.|+ +|.|++||.+..... .++.+|.++.+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 44899999999999999999999999999999999999999 999999999875432 3578999997788999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
+||||.|.+++.+.. +.+.+.+++++.+.|+|.+|.|+.+|+
T Consensus 92 ~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~---- 133 (245)
T COG4555 92 ARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE---- 133 (245)
T ss_pred HHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh----
Confidence 999999988775421 122445788899999999999999885
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..+.+|+..+|.++|+..+||+|++|++|+
T Consensus 134 -~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 134 -FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred -hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 99999999999999999999999999999999999999999999863 345666678899999999999999999999
Q ss_pred EEEecChhHHHH
Q 000612 403 IVYQGPRELVLE 414 (1391)
Q Consensus 403 iv~~G~~~~~~~ 414 (1391)
+|+.|+.+++..
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999988754
No 75
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.7e-39 Score=327.52 Aligned_cols=213 Identities=25% Similarity=0.332 Sum_probs=183.9
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.|+||+-.|+. .+.+|+||||+|++||++-|+||||||||||||+|.+... +..|.|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 567777766642 3569999999999999999999999999999999999765 46899999999865
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. -++|.+|+|+||..+.+..||+||+.|...... .+.++.+++|.++|+.+||.+..+.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 31 257899999999999999999999999876654 34566778899999999999988876 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhc-CeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF-DELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~-D~~~ll~~gG~~~ 1088 (1391)
|||+|||+||||++.+|++|+.||||.+||+..+..||+++.++.+.|.|||+.||+. ++.+.. .+++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999998999999999985 455554 57888875 7888
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
.....
T Consensus 217 ~d~~~ 221 (223)
T COG2884 217 RDESR 221 (223)
T ss_pred ecccc
Confidence 77554
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.1e-39 Score=344.63 Aligned_cols=196 Identities=30% Similarity=0.451 Sum_probs=166.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1391)
..+|+|+|+.|++||+++|+|||||||||||++|.|+..|+ +|+|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999988876543 3579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
+|++||+||+.++..+.+.... +....++.+++.+||.+..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999987766543210 12234677899999986555
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
+..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.|+++.+.. +++|+.++|+ +++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEEEE
Confidence 13345699999999999999999999999999999999999999999999987644 4445556665 678889999999
Q ss_pred EcCCeE
Q 000612 398 LSDGQI 403 (1391)
Q Consensus 398 L~~G~i 403 (1391)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 77
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-39 Score=331.72 Aligned_cols=218 Identities=22% Similarity=0.314 Sum_probs=187.8
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCC---CCCeEEEEEEEc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITIS 930 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~ 930 (1391)
..++.+|++.+|. .+++|+|||+.|++++++|++|||||||||||++|.... ++-.++|+|.++
T Consensus 6 ~~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 3578889988874 357999999999999999999999999999999998743 344688999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCC
Q 000612 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPG 1004 (1391)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~ 1004 (1391)
|.++.. ..+|+.+|.|+|.+..|| +|++||+.|+.++....+ ++.++.|++.|+...|++- +|.+-..
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-- 146 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-- 146 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--
Confidence 987643 357889999999999999 999999999987765433 6677889999999999764 4444222
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
..+|||||+|||||||+|+.+|+||+||||||+|||.+...|.+++.++. +.-|||++||.+. ......|+..++..
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~- 223 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL- 223 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-
Confidence 35799999999999999999999999999999999999999999999997 5799999999986 46778899999986
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|+++++|+.
T Consensus 224 G~LvE~g~T 232 (253)
T COG1117 224 GELVEFGPT 232 (253)
T ss_pred cEEEEEcCH
Confidence 799999997
No 78
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.6e-39 Score=371.63 Aligned_cols=229 Identities=24% Similarity=0.362 Sum_probs=193.2
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCC
Q 000612 110 VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSS 189 (1391)
Q Consensus 110 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1391)
..+..+...|+|+|+++++.+ +++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~~---------------------------------k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYGP---------------------------------KRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeCC---------------------------------CCceecceeEEecCCCEEEEECCCCC
Confidence 467778889999999999842 23499999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHH
Q 000612 190 GKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTEL 266 (1391)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~ 266 (1391)
||||++++|.++++ . +|+|.+||.++.+... ++.||||||+. ++.+-||.+||.++. +...++.+.++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~-~LFndTIl~NI~YGn----~sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDS-VLFNDTILYNIKYGN----PSASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcc-cccchhHHHHhhcCC----CCcCHHHHHHH
Confidence 99999999999998 5 8999999999877654 57899999954 555679999999985 33445666666
Q ss_pred HHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccce
Q 000612 267 ARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALF 346 (1391)
Q Consensus 267 ~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vll 346 (1391)
|++...++ + ...|++.++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~hd---------------------------~--i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGLHD---------------------------V--ISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCcHH---------------------------H--HHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 66543211 1 345889999999998875 99999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHHH
Q 000612 347 MDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 347 LDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|||||+||+.|...|++.+.+. ..++|+|++. |. ..+..-||+|++|++|++...|+++|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~Iv-H~-l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMIV-HR-LDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEEE-ec-chhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 3566666654 43 46788899999999999999999999976
No 79
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.2e-38 Score=368.25 Aligned_cols=206 Identities=24% Similarity=0.351 Sum_probs=177.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1391)
+.+|+|||+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998866432 45799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.|+.+..+... .+...++.++++.+||.+..|..
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~--- 137 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSY--- 137 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC---
Confidence 99999999998764432110 01123467789999998877654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
++.|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+..+ .+|+.++|+.+.+.++||+|++|
T Consensus 138 --~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 138 --PSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 456999999999999999999999999999999999999999999999865334 45556888999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 80
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=362.19 Aligned_cols=214 Identities=28% Similarity=0.399 Sum_probs=191.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++-.+. +..+|+|+|++|+.||.++|+|||||||||||++|||... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467788876653 1128999999999999999999999999999999999876 5689999999987
Q ss_pred Cc-ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
+. ...+|.+++|+|+..++|++||+||+.|+.+.+. .++++.+++|+++.+.++|.++.|+. +.+||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 66 3456889999999999999999999999987763 45677888999999999999999987 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |.+.++||+.+|+ +|++...|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999974 7889999999999 589999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 7
No 81
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-39 Score=404.79 Aligned_cols=258 Identities=23% Similarity=0.389 Sum_probs=211.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCC--CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL--PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1391)
...++....++++++|..+. +... +..+... -..+|+|+||++.|.
T Consensus 951 ~~ka~~Aa~~iF~i~dr~~~-----i~~~-~~~~~~~~~~~G~I~~~~V~F~YP-------------------------- 998 (1228)
T KOG0055|consen 951 ISKAKIAAGSIFEILDRKPT-----IDPD-STSGGKLPNVKGDIEFRNVSFAYP-------------------------- 998 (1228)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----CCCC-CCCCCccccceeEEEEeeeEeeCC--------------------------
Confidence 44677788888888887763 2111 1234323 356799999999973
Q ss_pred hhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEc
Q 000612 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1391)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1391)
++ +..+||+|+|+++++|+.+||+|||||||||...+|-+.++|+ +|.|.+||+++++++. ++++|.|+
T Consensus 999 ----sR-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVs 1070 (1228)
T KOG0055|consen 999 ----TR-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVS 1070 (1228)
T ss_pred ----CC-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceec
Confidence 22 4567999999999999999999999999999999999999998 9999999999998876 47899999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000612 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1391)
Q Consensus 233 Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1391)
|+|.+|. .|+||||.|+.. ....+.+.++++...++++ +.+|++++
T Consensus 1071 QEP~LF~-~TIrENI~YG~~----~vs~~eIi~Aak~ANaH~F-----------------------------I~sLP~Gy 1116 (1228)
T KOG0055|consen 1071 QEPVLFN-GTIRENIAYGSE----EVSEEEIIEAAKLANAHNF-----------------------------ISSLPQGY 1116 (1228)
T ss_pred cCchhhc-ccHHHHHhccCC----CCCHHHHHHHHHHhhhHHH-----------------------------HhcCcCcc
Confidence 9997775 699999999821 1233455555554433322 56799999
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhc
Q 000612 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1391)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1391)
||.||+++. +||||||||++||||+++||+||||||.||+||+++.+-+.+.|++.. .++|+|++. |+..+.+.+
T Consensus 1117 DT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIA--HRLSTIqna 1191 (1228)
T KOG0055|consen 1117 DTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIA--HRLSTIQNA 1191 (1228)
T ss_pred cCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEe--cchhhhhcC
Confidence 999999887 599999999999999999999999999999999999999999999864 455555543 467899999
Q ss_pred CeEEEEcCCeEEEecChhHHHH
Q 000612 393 DDIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~ 414 (1391)
|.|+|+++|+|+++|+|+++++
T Consensus 1192 D~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1192 DVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred CEEEEEECCEEEecccHHHHHh
Confidence 9999999999999999999976
No 82
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-38 Score=364.36 Aligned_cols=215 Identities=27% Similarity=0.405 Sum_probs=187.4
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..+.++|++..++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 3578899988774 2469999999999999999999999999999999999876 468999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
... ...++.+|||+|++.+++.+||+|++.|.+.++. .+..+.+++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 2356789999999999999999999998765542 233444556889999999988887764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++||+||+++|++|||||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g 220 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEG 220 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999986 67889999999986 7999999
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 221 ~~ 222 (306)
T PRK13537 221 AP 222 (306)
T ss_pred CH
Confidence 86
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5e-38 Score=370.31 Aligned_cols=206 Identities=28% Similarity=0.406 Sum_probs=178.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..++|++||+
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVA 94 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHH
Confidence 4899999999999999999999999999999999999998 9999999998865544 47799999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+.++.. ..+...+++++++.+||++..|.. ++.|
T Consensus 95 eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~~-----~~~L 135 (353)
T TIGR03265 95 DNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERKY-----PGQL 135 (353)
T ss_pred HHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhCC-----hhhC
Confidence 9999986543211 001223567889999998877654 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+. .++++|.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~ 214 (353)
T TIGR03265 136 SGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHGVIE 214 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987653 3455566889999999999999999999999
Q ss_pred EecChhHHHH
Q 000612 405 YQGPRELVLE 414 (1391)
Q Consensus 405 ~~G~~~~~~~ 414 (1391)
+.|+++++.+
T Consensus 215 ~~g~~~~~~~ 224 (353)
T TIGR03265 215 QVGTPQEIYR 224 (353)
T ss_pred EEcCHHHHHh
Confidence 9999988743
No 84
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-38 Score=369.13 Aligned_cols=205 Identities=24% Similarity=0.386 Sum_probs=178.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+++++||+
T Consensus 20 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~ 96 (351)
T PRK11432 20 TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLG 96 (351)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998876555 37899999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+.++... .+...+++++++.+||.+..+.. ++.|
T Consensus 97 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~L 137 (351)
T PRK11432 97 ENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQI 137 (351)
T ss_pred HHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999875432110 11223567889999998766544 5579
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++++.++|+..++.+++|+|++|++|+++
T Consensus 138 SgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~ 216 (351)
T PRK11432 138 SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQ-QFNITSLYVTHDQSEAFAVSDTVIVMNKGKIM 216 (351)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765 33455566889999999999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
..|+++++.
T Consensus 217 ~~g~~~~~~ 225 (351)
T PRK11432 217 QIGSPQELY 225 (351)
T ss_pred EEcCHHHHH
Confidence 999999874
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-38 Score=370.50 Aligned_cols=205 Identities=25% Similarity=0.367 Sum_probs=177.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.+++++||+
T Consensus 18 ~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 18 QVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred EEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998876544 37899999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+..+.. ..+...+++++++.+||++..+.. ++.|
T Consensus 95 eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 135 (356)
T PRK11650 95 ENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDRK-----PREL 135 (356)
T ss_pred HHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhCC-----hhhC
Confidence 9999986543210 001123467889999998776654 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|++|+||||||+||..++..+.+.|+++.+ ..++++|.++|+..++.+++|+|++|++|+++
T Consensus 136 SgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~ 214 (356)
T PRK11650 136 SGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHR-RLKTTSLYVTHDQVEAMTLADRVVVMNGGVAE 214 (356)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998765 33455666889999999999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
..|+++++.
T Consensus 215 ~~g~~~~~~ 223 (356)
T PRK11650 215 QIGTPVEVY 223 (356)
T ss_pred EECCHHHHH
Confidence 999999874
No 86
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.3e-38 Score=369.24 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=178.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCce--eEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVS--GTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+++.+|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 4999999999999999999999999999999999999998 8 999999998865444 467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.|+.+..+... .+...+++++++.+||++..|..+ +
T Consensus 96 v~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~-----~ 136 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP-----A 136 (362)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----h
Confidence 9999999875432110 012235678899999988776554 5
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999987653224566668899999999999999999999
Q ss_pred EEEecChhHHH
Q 000612 403 IVYQGPRELVL 413 (1391)
Q Consensus 403 iv~~G~~~~~~ 413 (1391)
++..|+++++.
T Consensus 217 i~~~g~~~~~~ 227 (362)
T TIGR03258 217 LAAHGEPQALY 227 (362)
T ss_pred EEEEcCHHHHH
Confidence 99999999884
No 87
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-39 Score=363.45 Aligned_cols=257 Identities=21% Similarity=0.348 Sum_probs=213.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.|..-.-+|+.++++++++| +.+......+..++..|.|+|+++.+++
T Consensus 502 iQ~nfiDmEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~p--------------------------- 549 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYDP--------------------------- 549 (790)
T ss_pred HHHhhhhHHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecCC---------------------------
Confidence 45555667888899988888 7777777777889999999999999853
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~ 234 (1391)
.+++|+||||++.||+.+||+||||+||||++++|-++++.+ +|.|++||++++... .++.||.||||
T Consensus 550 ------~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQD 620 (790)
T KOG0056|consen 550 ------GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQD 620 (790)
T ss_pred ------CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCc
Confidence 245999999999999999999999999999999999999988 999999999987543 35789999996
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
..+| +.|+..||.|+. ++...|.+.++++... +- =+++++++.++|
T Consensus 621 tvLF-NdTI~yNIryak----~~AsneevyaAAkAA~--------------------------IH---drIl~fPegY~t 666 (790)
T KOG0056|consen 621 TVLF-NDTILYNIRYAK----PSASNEEVYAAAKAAQ--------------------------IH---DRILQFPEGYNT 666 (790)
T ss_pred ceee-cceeeeheeecC----CCCChHHHHHHHHHhh--------------------------HH---HHHhcCchhhhh
Confidence 6555 569999999874 3333333333322211 11 247899999999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.||+++.+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|++. |+..+.-.+|.
T Consensus 667 ~VGERGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ 741 (790)
T KOG0056|consen 667 RVGERGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADL 741 (790)
T ss_pred hhhhcccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccE
Confidence 99999997 999999999999999999999999999999999999999999999874 45555433 45667778999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|+++++|+|++.|.++|++.
T Consensus 742 ILvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLK 761 (790)
T ss_pred EEEEeCCeEeecCcHHHHHh
Confidence 99999999999999999975
No 88
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=362.89 Aligned_cols=215 Identities=27% Similarity=0.388 Sum_probs=191.8
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++-.+. ...+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888876653 4679999999999999999999999999999999999876 4689999999987
Q ss_pred Ccc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
... ..+|.+|+|+|+..+||++||+||+.|+..++ ....+++.+++|+++++.++|.++.+.. +..||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 653 35688999999999999999999999997643 3345567788999999999999998887 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+||||.|+||..-+..+..-|+++.++ |.|.|++|||.. |.+.+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998754 999999999986 68899999999985 79999988
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 7
No 89
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.5e-37 Score=360.99 Aligned_cols=205 Identities=27% Similarity=0.407 Sum_probs=177.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1391)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 21 ~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 97 (306)
T PRK13537 21 LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTV 97 (306)
T ss_pred EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.|.++..+... .+...+++++++.+||.+..++.++ +
T Consensus 98 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 138 (306)
T PRK13537 98 RENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG-----E 138 (306)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----h
Confidence 999998665433110 0112245678899999988887665 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~i 216 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGRK 216 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 45566688999999999999999999999
Q ss_pred EEecChhHHHH
Q 000612 404 VYQGPRELVLE 414 (1391)
Q Consensus 404 v~~G~~~~~~~ 414 (1391)
++.|+++++..
T Consensus 217 ~~~g~~~~l~~ 227 (306)
T PRK13537 217 IAEGAPHALIE 227 (306)
T ss_pred EEECCHHHHHh
Confidence 99999998864
No 90
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-38 Score=333.67 Aligned_cols=205 Identities=27% Similarity=0.334 Sum_probs=176.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC----ccceEEEEcCCC--CCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHD--NHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 239 (1391)
.+|+|||+++.+||..+|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999998 999999998765432 347799999997 5789
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
..||++.|.-+.+..+.+ +.+.++.++|+.+||+... -++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~----l~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSF----LDR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHH----Hhc
Confidence 999999997665432211 1112367789999998632 246
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.+..|||||||||+|||||+.+|++|++|||||+||+..+.+|++.|.++.+ ..+.+++.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeee
Confidence 6778999999999999999999999999999999999999999999998765 566777779999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000612 400 DGQIVYQGPRELVLE 414 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1391)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 91
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-37 Score=368.08 Aligned_cols=205 Identities=27% Similarity=0.373 Sum_probs=177.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.++|.+||+
T Consensus 28 ~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 104 (375)
T PRK09452 28 EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVF 104 (375)
T ss_pred EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998866544 46799999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+..+... .+....++++++.+||++..+.. +..|
T Consensus 105 eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----p~~L 145 (375)
T PRK09452 105 ENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRK-----PHQL 145 (375)
T ss_pred HHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 99999865332110 01123467789999998777654 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 146 SgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~ 224 (375)
T PRK09452 146 SGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIE 224 (375)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 455666889999999999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
..|+++++.
T Consensus 225 ~~g~~~~i~ 233 (375)
T PRK09452 225 QDGTPREIY 233 (375)
T ss_pred EEcCHHHHH
Confidence 999998874
No 92
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.5e-37 Score=361.73 Aligned_cols=217 Identities=23% Similarity=0.303 Sum_probs=186.2
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|++..++.. .....+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788888777421 012469999999999999999999999999999999999876 45899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. ..++.+||++|+..+++..||+||+.|..... ..+.++.++++.++++.+||.+..|.. +..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 23567999999999999999999999875443 234455667789999999999888776 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 999999999986 47788999999985 8999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 93
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-37 Score=346.70 Aligned_cols=213 Identities=24% Similarity=0.352 Sum_probs=180.4
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877763 2469999999999999999999999999999999999875 458999999987543
Q ss_pred ------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
..+++.++|++|++.+++.+||.|++.+...... ..+.++.++.++++++.++|.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999988899999999988643221 1233444567889999999987776653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 57788999999985 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 9875
No 94
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=342.68 Aligned_cols=207 Identities=29% Similarity=0.421 Sum_probs=180.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCC----CcCccceEEEEcCCC-CCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----EFVPQRTAAYISQHD-NHIG 239 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1391)
..+|+|+|+.+++|+.++|+||||||||||+++|+|++.|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 45999999999999999999999999999999999999998 899999998865 223357899999996 5677
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.-||.|.++|+....+... ++...+++++++.+||.+.++ +
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~-----r 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLD-----R 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhcc-----C
Confidence 8899999999987765421 123456888999999998766 4
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.+ .++.+||.++|+...+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999999865 444566668999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000612 400 DGQIVYQGPRELVLE 414 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1391)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 95
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=362.91 Aligned_cols=209 Identities=28% Similarity=0.390 Sum_probs=177.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||+
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998865443 36799999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+........ ...+...+++++++.+||++..|.. +..|
T Consensus 93 eni~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~L 137 (353)
T PRK10851 93 DNIAFGLTVLPRRERP------------------------------NAAAIKAKVTQLLEMVQLAHLADRY-----PAQL 137 (353)
T ss_pred HHHHhhhhhcccccCC------------------------------CHHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 9999976432100000 0011223567889999998766654 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|+++
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~ 216 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE 216 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765 33455666899999999999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
+.|+++++.
T Consensus 217 ~~g~~~~i~ 225 (353)
T PRK10851 217 QAGTPDQVW 225 (353)
T ss_pred EEcCHHHHH
Confidence 999999874
No 96
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.7e-37 Score=363.13 Aligned_cols=208 Identities=21% Similarity=0.306 Sum_probs=178.9
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1391)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 345999999999999999999999999999999999999998 9999999999876543 467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1391)
+++++||+||+.|+.+..+... ++...++.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999865433210 011234677899999987666554
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
..|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+.. +.+|+.++|+..++..++|+|+
T Consensus 128 -----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 -----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999875433 4556668899999999999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000612 397 LLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1391)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 97
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.8e-38 Score=395.65 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=204.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.+......||+.++.++.++ +++.... ...+..+++|+|+++.++.
T Consensus 295 ~~~~~~a~~ri~~~l~~~~~-----~~~~~~~--~~~~~~~I~f~~vsf~y~~--------------------------- 340 (567)
T COG1132 295 LQRASAAAERLFELLDEEPE-----VEDPPDP--LKDTIGSIEFENVSFSYPG--------------------------- 340 (567)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCCCC--CCCCCCeEEEEEEEEEcCC---------------------------
Confidence 56788888999999988654 3222222 3445677999999999842
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
++++|+|+|++++|||.++|+||||||||||+++|.|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 341 ------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 341 ------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred ------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 245999999999999999999999999999999999999998 9999999999887665 4789999997
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+|. .||+|||.++.. ....+.+.++++... ..+.+ ..+++++||
T Consensus 412 ~~LF~-~TI~~NI~~g~~----~at~eei~~a~k~a~---------------------------~~d~I--~~lp~g~dt 457 (567)
T COG1132 412 PLLFS-GTIRENIALGRP----DATDEEIEEALKLAN---------------------------AHEFI--ANLPDGYDT 457 (567)
T ss_pred ceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhC---------------------------hHHHH--HhCcccccc
Confidence 76665 899999998752 122234444433321 11222 245778999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.||+++. .||||||||++||||++.+|+||+||||||+||+.+...|.+.++++. +++|+++ +.|.. .+...+|+
T Consensus 458 ~vge~G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRl-sti~~aD~ 532 (567)
T COG1132 458 IVGERGV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRL-STIKNADR 532 (567)
T ss_pred eecCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccH-hHHHhCCE
Confidence 9997655 599999999999999999999999999999999999999999998764 3456666 56655 45555999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|++++.|+++++..
T Consensus 533 IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 533 IIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred EEEEECCEEEEecCHHHHHH
Confidence 99999999999999999976
No 98
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-37 Score=345.76 Aligned_cols=206 Identities=30% Similarity=0.395 Sum_probs=171.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4999999999999999999999999999999999999998 999999998875432 2357999999998899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++.+... +.. .++....++++++.+||++..++.+
T Consensus 91 ~~tv~~~l~~~~~~~~-~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (235)
T cd03261 91 SLTVFENVAFPLREHT-RLS--------------------------------EEEIREIVLEKLEAVGLRGAEDLYP--- 134 (235)
T ss_pred CCcHHHHHHHHHhhcc-CCC--------------------------------HHHHHHHHHHHHHHcCCchhhcCCh---
Confidence 9999999988643210 000 0011224567789999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+++|+|++|+
T Consensus 135 --~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l~ 211 (235)
T cd03261 135 --AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVLY 211 (235)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEEE
Confidence 469999999999999999999999999999999999999999999987642 24456667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (235)
T cd03261 212 DGKIVAEGTPEELR 225 (235)
T ss_pred CCeEEEecCHHHHc
Confidence 99999999987753
No 99
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.2e-37 Score=362.51 Aligned_cols=214 Identities=25% Similarity=0.362 Sum_probs=188.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++.+++ .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 377889888764 2468999999999999999999999999999999999876 4689999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.+.. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224577999999999999999999999986543 234556677899999999999988876 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68899999999986 79999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
+
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 100
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=363.54 Aligned_cols=214 Identities=24% Similarity=0.356 Sum_probs=186.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888887762 12469999999999999999999999999999999999876 46899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
.. ..++.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..+..+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 32 23478999999999999999999999986543 2344555677899999999998888764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 999999999986 68899999999985 899999986
No 101
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-37 Score=326.74 Aligned_cols=206 Identities=24% Similarity=0.392 Sum_probs=172.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIGE 240 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~~ 240 (1391)
.++|+|||+++++||+++|+||||+|||||||+|+|..++. +|+|.++|.++....+. +-++||||....|++
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 56999999999999999999999999999999999999987 99999999999887664 568999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-Cccccccccccc
Q 000612 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDE 319 (1391)
Q Consensus 241 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1391)
|||+|||..++..... ... .. ...|.+.+.|- |.+..+..-|
T Consensus 93 LTVeENL~~g~~~~~~-~~~----------------~~------------------~~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRD-KEA----------------QE------------------RDLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhcccc-ccc----------------cc------------------ccHHHHHHHChhHHHHhcCccc--
Confidence 9999999987643210 000 00 00233333332 3344444444
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+ ..+.+|+.+.|+...+.+++|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~-~~g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRK-EGGMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHH-cCCcEEEEEeccHHHHHHhhCEEEEEe
Confidence 4999999999999999999999999999999999999999999999865 345677779999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000612 400 DGQIVYQGPRELVLE 414 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1391)
+|+|++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998854
No 102
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-37 Score=363.27 Aligned_cols=205 Identities=25% Similarity=0.340 Sum_probs=177.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.+++++||+
T Consensus 33 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 109 (377)
T PRK11607 33 HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVE 109 (377)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998765444 47899999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+.++... .+...+++++++.+||.+..+.. +.+|
T Consensus 110 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~L 150 (377)
T PRK11607 110 QNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQL 150 (377)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999865432110 01223567889999998766544 4579
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|++|||||||++||..++.++.+.|+++.+.. +.++|.++|+..++..++|+|++|++|+++
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~ 229 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFV 229 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999998876544 455666889999999999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
..|+++++.
T Consensus 230 ~~g~~~~~~ 238 (377)
T PRK11607 230 QIGEPEEIY 238 (377)
T ss_pred EEcCHHHHH
Confidence 999999874
No 103
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.4e-36 Score=374.39 Aligned_cols=217 Identities=29% Similarity=0.437 Sum_probs=181.4
Q ss_pred cCCCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEE
Q 000612 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT 928 (1391)
Q Consensus 849 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~ 928 (1391)
.|.-...++|+|++|.++.. ...+|+|+|++|+|||.+||+|+||||||||+|+|+|... +..|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 44456689999999999742 2369999999999999999999999999999999999876 5689999
Q ss_pred EcCccCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccc
Q 000612 929 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-------LRQS 998 (1391)
Q Consensus 929 i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~ 998 (1391)
+||+++.+ ..+|+.+|||+|++.++. -|++||+.++. ++.+.++ +.++++..|..+ -.|+
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhccccccc
Confidence 99998654 568899999999988765 69999998752 3333332 344444444433 3456
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeE
Q 000612 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1391)
Q Consensus 999 ~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~ 1078 (1391)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.+.. +|+|+|+++|+++ .++.+|++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 66654 46899999999999999999999999999999999999999999999985 5899999999986 57899999
Q ss_pred EEEecCcEEEEecCC
Q 000612 1079 FLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1079 ~ll~~gG~~~y~G~~ 1093 (1391)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 899999996
No 104
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.3e-37 Score=316.41 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=175.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1391)
..+|+|||+.|++||++-|+||||||||||||+|.+...|+ +|+|.+||+++..... +|+||+|+||--++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 45999999999999999999999999999999999999998 9999999999865432 48899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++.
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~---- 133 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARA---- 133 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhc----
Confidence 99999999999987765321 2234567889999999987764
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
.+..|||||+|||+||||++.+|++|+-||||-.||+.++..|++.+.++-+ .+|+|++.+|+..-+..+-.+++.|
T Consensus 134 -lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 134 -LPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred -CccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 4557999999999999999999999999999999999999999999998753 3566666788988888888999999
Q ss_pred cCCeEEEecC
Q 000612 399 SDGQIVYQGP 408 (1391)
Q Consensus 399 ~~G~iv~~G~ 408 (1391)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 105
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-37 Score=393.66 Aligned_cols=255 Identities=23% Similarity=0.339 Sum_probs=195.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCC-CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL-PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1391)
.++++...+|+.++++.+++.. .......+. ...+|+|+||++.+..
T Consensus 314 ~~~~~~~~~ri~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~~vsf~~~~-------------------------- 361 (588)
T PRK11174 314 KAQAVGAAESLVTFLETPLAHP------QQGEKELASNDPVTIEAEDLEILSPD-------------------------- 361 (588)
T ss_pred HHHHHHHHHHHHHHHcCCCccc------CCCccccCCCCCceEEEEeeEEeccC--------------------------
Confidence 4677788889888887654310 000111111 1347999999976421
Q ss_pred hcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000612 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1391)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1391)
++++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++++... ++.++||+|
T Consensus 362 -------~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q 430 (588)
T PRK11174 362 -------GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQ 430 (588)
T ss_pred -------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecC
Confidence 134999999999999999999999999999999999999 87 9999999999887654 468999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 234 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
++.+| +.||+|||.++.. ....+.+.++++... .++.+ -.|+++.|
T Consensus 431 ~~~LF-~~TI~eNI~~g~~----~~~~eei~~al~~a~---------------------------l~~~i--~~lp~G~d 476 (588)
T PRK11174 431 NPQLP-HGTLRDNVLLGNP----DASDEQLQQALENAW---------------------------VSEFL--PLLPQGLD 476 (588)
T ss_pred CCcCC-CcCHHHHhhcCCC----CCCHHHHHHHHHHhC---------------------------HHHHH--Hhcccccc
Confidence 87655 5799999998631 112222333322211 11222 24677889
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
|.||+++. .||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++. .++|+|++ +|.. ++.+.+|
T Consensus 477 T~vge~G~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiI-tHrl-~~i~~aD 551 (588)
T PRK11174 477 TPIGDQAA-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMV-THQL-EDLAQWD 551 (588)
T ss_pred cccccCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEE-ecCh-HHHHhCC
Confidence 99998765 599999999999999999999999999999999999999999998863 35566654 4443 6678899
Q ss_pred eEEEEcCCeEEEecChhHHHH
Q 000612 394 DIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|++|++|++++.|+++++.+
T Consensus 552 ~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 552 QIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred EEEEEeCCeEeecCCHHHHHh
Confidence 999999999999999999864
No 106
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-37 Score=312.77 Aligned_cols=201 Identities=24% Similarity=0.382 Sum_probs=172.8
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVrE~l~ 248 (1391)
..++.|++||+++|+|||||||||||++|+|+..|. +|+|.+||.+.....| +|-++.++|+.++|..+||++|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467899999999999999999999999999999998 9999999999887666 478999999999999999999999
Q ss_pred HhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000612 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1391)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1391)
++.. ++-+.. .+....++.++...||..+.+... .+|||||
T Consensus 94 LGl~---P~LkL~-------------------------------a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN-------------------------------AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQ 134 (231)
T ss_pred ccCC---cccccC-------------------------------HHHHHHHHHHHHHhChhhHhhhCc-----cccCchH
Confidence 8753 221100 011235677899999998877554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecC
Q 000612 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1391)
Q Consensus 329 rqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1391)
||||++||+|+++-+||+||||+|+||+.-+.+....+.+++...+.|+++ ++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999988755555554 6677789999999999999999999999
Q ss_pred hhHHH
Q 000612 409 RELVL 413 (1391)
Q Consensus 409 ~~~~~ 413 (1391)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98764
No 107
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-37 Score=359.43 Aligned_cols=214 Identities=24% Similarity=0.376 Sum_probs=188.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478899988763 2468999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
... ..+|.+|||+|+..++|.+||+||+.|+...+. .+.++.+++++++++.++|.++.+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 542 234789999999999999999999999865432 34556677899999999999888776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68899999999986 79999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
+
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 6
No 108
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-37 Score=363.04 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=175.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||+
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998765433 36799999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.|+.+..+... .+...+++++++.+||++..+..+ ..|
T Consensus 94 eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~L 134 (369)
T PRK11000 94 ENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KAL 134 (369)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hhC
Confidence 99998764332100 011234677899999987666554 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+|||||+.+|++|||||||+|||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 135 SgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~ 213 (369)
T PRK11000 135 SGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVA 213 (369)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 455666888999999999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
..|+++++.
T Consensus 214 ~~g~~~~i~ 222 (369)
T PRK11000 214 QVGKPLELY 222 (369)
T ss_pred EEcCHHHHH
Confidence 999998874
No 109
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.1e-36 Score=357.06 Aligned_cols=215 Identities=27% Similarity=0.378 Sum_probs=186.7
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++++|++..++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3588999988774 2469999999999999999999999999999999999876 458999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
... ...++.+||++|+..+++.+||.|++.+.+.++. .+..+..+.++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999987665432 223334456788999999998887764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++||++|+++|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999877999999999986 67889999999986 7999999
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 110
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9e-37 Score=360.03 Aligned_cols=214 Identities=24% Similarity=0.334 Sum_probs=187.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEE--EEEEEcCc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 932 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 932 (1391)
.++++|+++++. +..+|+|+|++|++||+++|+|||||||||||++|+|... +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 578899988774 2468999999999999999999999999999999999876 346 99999998
Q ss_pred cCCc-ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 933 PKKQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 933 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
+... ...+|.+|||+|+..++|.+||+||+.|+...+ ..+.++.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223567999999999999999999999986543 2344556677999999999999888764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~--g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 68889999999985 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|++
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9986
No 111
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-37 Score=338.96 Aligned_cols=214 Identities=23% Similarity=0.330 Sum_probs=188.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|++|+++. +..+|+|+|+.|++||.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 678899998852 2479999999999999999999999999999999999876 45799999998855
Q ss_pred ----cccccceEEEeccCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 936 ----QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ----~~~~~~~~gyv~Q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
...+++.+|||+|++.. +..-||.|.+.|+..-. ..+.++.+++++++++.+++.++++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 34577899999999765 45679999999986432 345667888999999999999998876 468999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||||+||.+|+.+|++|+|||||||||+.+...+++.++++..+ |.|||+++||.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 789999999986 57788999999986 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 112
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=358.05 Aligned_cols=206 Identities=27% Similarity=0.375 Sum_probs=175.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1391)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 45999999999999999999999999999999999999998 9999999998765432 35799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998764332100 001224567899999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999987653 3455666888899999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 113
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=337.30 Aligned_cols=210 Identities=28% Similarity=0.400 Sum_probs=176.5
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999865 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000612 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
. ..++.++|++|++.+++.+|++|++.+..... ....+..++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23457999999988888999999998764332 1223344556889999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999986 47788999999986 6887765
No 114
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.2e-36 Score=356.88 Aligned_cols=205 Identities=27% Similarity=0.392 Sum_probs=175.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1391)
.+|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.+||++|++.+++.+||
T Consensus 55 ~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 131 (340)
T PRK13536 55 AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTV 131 (340)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999989999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.|.....+... .+....++++++.+||++..++.++ .
T Consensus 132 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~-----~ 172 (340)
T PRK13536 132 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS-----D 172 (340)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----h
Confidence 999987554432100 0011235667889999987777665 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 173 LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i 250 (340)
T PRK13536 173 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRK 250 (340)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999754 3 45566688999999999999999999999
Q ss_pred EEecChhHHHH
Q 000612 404 VYQGPRELVLE 414 (1391)
Q Consensus 404 v~~G~~~~~~~ 414 (1391)
+++|+.+++.+
T Consensus 251 ~~~g~~~~l~~ 261 (340)
T PRK13536 251 IAEGRPHALID 261 (340)
T ss_pred EEEcCHHHHHh
Confidence 99999998865
No 115
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.4e-37 Score=310.15 Aligned_cols=196 Identities=24% Similarity=0.331 Sum_probs=172.2
Q ss_pred ccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCcHHHHHHH
Q 000612 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYESLLF 964 (1391)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f 964 (1391)
..+..|.+||++||+||||||||||||+|+|... +.+|.|.|||.+.... ...|-++.++|+..+|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4678899999999999999999999999999877 4589999999986543 355778999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000612 965 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1391)
Q Consensus 965 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~ 1044 (1391)
+..-. ... .++.++.++.++..+||.++.+.+. ..|||||||||++||.|+++-+|++||||.|.|||.-+.
T Consensus 95 Gl~P~--LkL-~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPG--LKL-NAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCcc--ccc-CHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 64211 112 2344567899999999999998874 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1045 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1045 ~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
.+..++.++++ ++.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999985 4999999999997 78899999999996 799999986
No 116
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-36 Score=354.24 Aligned_cols=201 Identities=27% Similarity=0.380 Sum_probs=176.4
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCcH
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 83 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTG 83 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcH
Confidence 569999999999999999999999999999999999875 458999999987643 2345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
+|++.+.+.++. .+..+.++.++++++.++|.+..++.+ +.|||||||||+||+||+++|++|+|||||+||
T Consensus 84 ~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 84 RENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999998765542 233344566889999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 156 D~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 156 DPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999877999999999986 57788999999985 799999985
No 117
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=357.31 Aligned_cols=216 Identities=25% Similarity=0.382 Sum_probs=185.8
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66788887763 2469999999999999999999999999999999999875 45899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
.. ..++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 32 2346799999999999999999999997643211 1234455567789999999998887776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999985 79999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 6
No 118
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.5e-36 Score=336.70 Aligned_cols=208 Identities=23% Similarity=0.318 Sum_probs=175.2
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567888887741 12359999999999999999999999999999999999865 45899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. .+++.++|++|++.+++.+||.|++.+....+. ...++.++.++++++.++|.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245679999999988889999999988754331 223344566889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777999999999986 46678999999986 44
No 119
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.7e-36 Score=343.71 Aligned_cols=205 Identities=20% Similarity=0.228 Sum_probs=152.2
Q ss_pred CCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcC
Q 000612 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1391)
.|..+.+.+|.+.++.. .-+++.+++..++.-...+++|+||+||||+++++.|..+ +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 34467888888776521 1268899999999999999999999999999999998654 3456665543
Q ss_pred ccCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 932 YPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 932 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
+++++|-.|..+-+-.+.|.+ +.+-...+ +.... +.+++-+..+||+.-.-. ..+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~--pG~~~----ee~r~hl~~~Gl~g~la~----~si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSF--PGKTE----EEIRRHLGSFGLSGELAL----QSIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhC--CCCCH----HHHHHHHHhcCCCchhhh----ccccccCCc
Confidence 456889999766444444433 22322232 12222 235677888898753211 125689999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||-||++|.....+|.+|+|||||+.||..+-..+-++|++. +..||+++|+-+. +-..|+++.+.++|.-.-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999976 4579999999754 667899999998765444444
Q ss_pred C
Q 000612 1092 P 1092 (1391)
Q Consensus 1092 ~ 1092 (1391)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 4
No 120
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=335.61 Aligned_cols=215 Identities=24% Similarity=0.362 Sum_probs=179.5
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++.. ...+.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 467777766411 011469999999999999999999999999999999999865 458999999987642
Q ss_pred ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000612 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1391)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl 1016 (1391)
.++.++|++|++.+++.+|++|++.+....+. ...+..++.++++++.++|.+..+..+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35679999999988888999999988654332 223344566889999999987776653 57999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEec-CcEEEEecCC
Q 000612 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1391)
Q Consensus 1017 ~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~-gG~~~y~G~~ 1093 (1391)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999864 4899999999986 47788999999985 4899988775
No 121
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=335.79 Aligned_cols=199 Identities=29% Similarity=0.442 Sum_probs=166.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 14 RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 5999999999999999999999999999999999999998 9999999988754332 35799999998888899999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.++....+... .+....++++++.+||++..++.+ ..|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03259 91 ENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYP-----HEL 131 (213)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 99988643221100 001123566788999987666554 459
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|++++|++|+++
T Consensus 132 SgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 210 (213)
T cd03259 132 SGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRIV 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876433 455666888889999999999999999998
Q ss_pred Eec
Q 000612 405 YQG 407 (1391)
Q Consensus 405 ~~G 407 (1391)
+.|
T Consensus 211 ~~g 213 (213)
T cd03259 211 QVG 213 (213)
T ss_pred ecC
Confidence 765
No 122
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-36 Score=333.97 Aligned_cols=209 Identities=24% Similarity=0.417 Sum_probs=177.2
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4677777663 2469999999999999999999999999999999999865 458999999987643
Q ss_pred ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000612 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1391)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl 1016 (1391)
..++.++|++|++.+++.+|++|++.+....+. ....+.++.++++++.+++.+..+.. +..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345679999999988888999999988654432 22334455688999999998776665 357999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1017 ~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 46778999999986 7887664
No 123
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-36 Score=351.39 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=183.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|||++|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477888888763 2469999999999999999999999999999999999865 4589999999875
Q ss_pred Cc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000612 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 935 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1012 (1391)
.. ...++.+||++|++.+++.+||+|++.+.+.... .+..+.++.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2245679999999988899999999987554321 233344456788999999988777764 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57788999999985 79999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 124
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-36 Score=347.68 Aligned_cols=218 Identities=27% Similarity=0.404 Sum_probs=176.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCC-CC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDN-HI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1391)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999876532 2367999999863 44
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc--ccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD--VCADTMV 316 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1391)
..+||+||+.|+....+.. .++....++++++.+||+ +..|
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~--- 139 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKD--- 139 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhcc---
Confidence 5689999999865332210 011223467789999996 4444
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
+.++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++|+.++|+..++.++||+|+
T Consensus 140 --~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 140 --KSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHK-EYNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred --CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 34557999999999999999999999999999999999999999999998765 335566668889999999999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000612 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1391)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 125
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3e-36 Score=356.73 Aligned_cols=214 Identities=22% Similarity=0.326 Sum_probs=187.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988774 2468999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
... ..+|.+|||+|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 432 23567999999999999999999999976433 2344555667899999999998888763 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 999999999986 68899999999985 89999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
+
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 126
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=335.24 Aligned_cols=212 Identities=29% Similarity=0.377 Sum_probs=179.7
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 5677777663 2469999999999999999999999999999999999865 458999999976532
Q ss_pred --ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
...++.++|++|++.+++.+||+|++.+....+. .+.++.++.++++++.++|.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2334679999999988899999999988754432 223334556889999999988777653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999986 57788999999985 799988874
No 127
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-36 Score=335.54 Aligned_cols=204 Identities=29% Similarity=0.390 Sum_probs=171.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1391)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 14 EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 4999999999999999999999999999999999999998 999999998764321 13579999999888999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.+..+..+... .+....++++++.+||++..++.+ +.
T Consensus 91 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 131 (220)
T cd03265 91 WENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----KT 131 (220)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----hh
Confidence 999988654322100 001224567899999987666554 45
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+.+++.+.+|++++|++|++
T Consensus 132 LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i 210 (220)
T cd03265 132 YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKE-EFGMTILLTTHYMEEAEQLCDRVAIIDHGRI 210 (220)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998764 3245566688899999999999999999999
Q ss_pred EEecChhHH
Q 000612 404 VYQGPRELV 412 (1391)
Q Consensus 404 v~~G~~~~~ 412 (1391)
+..|+++++
T Consensus 211 ~~~~~~~~~ 219 (220)
T cd03265 211 IAEGTPEEL 219 (220)
T ss_pred EEeCChHHc
Confidence 999987653
No 128
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.1e-36 Score=333.54 Aligned_cols=210 Identities=26% Similarity=0.389 Sum_probs=177.2
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5677877663 2358999999999999999999999999999999999865 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000612 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
. ..++.++|++|++.+++..|++|++.+....+. ...++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 2 224579999999988888999999988654321 233444556888999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999864 899999999986 57788999999986 7888876
No 129
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-36 Score=352.78 Aligned_cols=206 Identities=28% Similarity=0.395 Sum_probs=176.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1391)
+.+|+|+|++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 1357999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.+.++..+... .+....++++++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765432110 0011245778999999887776654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998754 3 4556668889999999999999999999
Q ss_pred EEEecChhHHHH
Q 000612 403 IVYQGPRELVLE 414 (1391)
Q Consensus 403 iv~~G~~~~~~~ 414 (1391)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998765
No 130
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=323.81 Aligned_cols=217 Identities=26% Similarity=0.341 Sum_probs=179.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++.+|++..++.... ...+|+|||++|.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~~---------~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGKF---------AFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCcc---------hhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 3677888877753221 1259999999999999999999999999999999999876 4689999999765
Q ss_pred Ccc----cccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000612 935 KQE----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 1007 (1391)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 1007 (1391)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++. .+++.++++.+||.+- .+.. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 432 46788999999975 67899999988654332 122222 2338999999999753 3333 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||||||+||||||+.+|++|+||||||.||+..++.|+++|.++.++ |.|.|+++||.+. +...|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999754 7899999999874 7789999999996 79
Q ss_pred EEEecCCC
Q 000612 1087 EIYVGPLG 1094 (1391)
Q Consensus 1087 ~~y~G~~~ 1094 (1391)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999973
No 131
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-37 Score=326.91 Aligned_cols=221 Identities=29% Similarity=0.421 Sum_probs=188.3
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1391)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|+++....++ .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999999 99999999999888764 4578899999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
++|||.||+..++..+.. .... .. .|. ...+..+...++.++|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~---------l~-~~~---------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGL---------LG-RPR---------ARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhh---------hc-ccc---------chhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988654321 0000 00 000 0011223445678899999999999988775
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++.+|+.|.|++.-++.+||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999864 45677778999999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000612 399 SDGQIVYQGPRELVLE 414 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1391)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 132
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.7e-36 Score=338.35 Aligned_cols=215 Identities=26% Similarity=0.354 Sum_probs=179.3
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4677777663 2469999999999999999999999999999999999865 458999999987643
Q ss_pred c---c-ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
. . .++.++|++|++.+++.+||+|++.+......... ....+.++.++++++.+++.+..+.. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 2 1 23468999999999999999999988654322110 11233455688999999998776665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 99998875
No 133
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-36 Score=338.41 Aligned_cols=209 Identities=30% Similarity=0.404 Sum_probs=171.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 16 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 16 VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHH
Confidence 4999999999999999999999999999999999999988 9999999988754332 35799999998888899999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.++....+...+. + ..+....++.+++.+||++..++.+ ..|
T Consensus 93 e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 137 (239)
T cd03296 93 DNVAFGLRVKPRSERP-------------------P-----------EAEIRAKVHELLKLVQLDWLADRYP-----AQL 137 (239)
T ss_pred HHHhhhhhhccccccC-------------------C-----------HHHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 9998865322110000 0 0001123567889999976665544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++... +++||.++|+..++.+.+|++++|++|+++
T Consensus 138 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 138 SGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 9999999999999999999999999999999999999999999876432 445566788888899999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
+.|+++++.
T Consensus 217 ~~~~~~~~~ 225 (239)
T cd03296 217 QVGTPDEVY 225 (239)
T ss_pred EecCHHHHh
Confidence 999988763
No 134
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=316.29 Aligned_cols=205 Identities=26% Similarity=0.365 Sum_probs=181.8
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 954 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 954 (1391)
++++++++||+.+++||++||+|||||||||.+.++.|... +.+|.|.+||.++.... -+..+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 45689999999999999999999999999999999999876 45899999999876532 2335899999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000612 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEP 1034 (1391)
.+||+||++.....+.. +....++++++++.|+.+++.++++.. ...||||||||+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~-----a~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSK-----AYSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCc-----ccccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999876665532 223346667789999999999999986 347999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1035 TsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
++|+||-+-..|.+.++.+.+.|.-|++|-|+.. |....+||.+++.+ |+++..|.+
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 9999999999999999999999999999999987 68899999999996 799999986
No 135
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=354.08 Aligned_cols=217 Identities=22% Similarity=0.294 Sum_probs=184.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|++++++.. ...+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5678888877411 013469999999999999999999999999999999999876 45899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. .+++.+||++|++.+++.+||+||+.+....+. .+.++.++.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 235679999999999999999999998754432 23344556788999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 7999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 136
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.4e-36 Score=349.26 Aligned_cols=205 Identities=28% Similarity=0.405 Sum_probs=173.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 18 ~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 94 (303)
T TIGR01288 18 VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTV 94 (303)
T ss_pred EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcH
Confidence 4999999999999999999999999999999999999998 999999998764322 24679999999888999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.+.....+... .+....++.+++.+||++..++.++ .
T Consensus 95 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~-----~ 135 (303)
T TIGR01288 95 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA-----L 135 (303)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----h
Confidence 999986543321100 0011234567889999887776654 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||+|++|++|++
T Consensus 136 LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i 213 (303)
T TIGR01288 136 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRK 213 (303)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 45566688899999999999999999999
Q ss_pred EEecChhHHHH
Q 000612 404 VYQGPRELVLE 414 (1391)
Q Consensus 404 v~~G~~~~~~~ 414 (1391)
++.|+++++..
T Consensus 214 ~~~g~~~~~~~ 224 (303)
T TIGR01288 214 IAEGRPHALID 224 (303)
T ss_pred EEEcCHHHHHh
Confidence 99999988754
No 137
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=337.20 Aligned_cols=216 Identities=27% Similarity=0.392 Sum_probs=180.5
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888888774 2469999999999999999999999999999999999865 45899999998754
Q ss_pred cc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
.. ..++.++|++|++.+++.+||.|++.+....+.. ......+.++.++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHH
Confidence 32 2245699999999888889999999886543211 0012233345678899999998777665 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999765 899999999986 47788999999985 78999987
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 138
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=347.12 Aligned_cols=218 Identities=24% Similarity=0.356 Sum_probs=175.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCCC-
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1391)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999999998 99999999987531 11357999999852
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1391)
.+...||+||+.|+.+..+... .+....++++++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3446799999998754322100 01123467789999996 445544
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~-~~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHK-EKGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998764 33455666889999999999999
Q ss_pred EEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000612 396 ILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1391)
++|++|++++.|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999888742 23344444443
No 139
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-37 Score=368.03 Aligned_cols=217 Identities=26% Similarity=0.412 Sum_probs=183.4
Q ss_pred CCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcC
Q 000612 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1391)
-...++|+||+|.||..+ +.++|+|+||+|+|||.|||+||||+||||+.++|..... +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 446799999999998753 3579999999999999999999999999999999998765 5689999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHH-----HHHHHHHcCCcccccccccCC
Q 000612 932 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMF-----IDEVMELVELNPLRQSLVGLP 1003 (1391)
Q Consensus 932 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~-----v~~~l~~l~L~~~~~~~vg~~ 1003 (1391)
+|+++ ..+++.+|+|.|+|.+|. -||+||+.|+.. +.++++.... +.+-+ .++.+-.||.||..
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEK 601 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCc
Confidence 99765 457789999999999986 599999999743 3344332221 22222 24556689999987
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
|. .||||||||++|||||++||+||+|||+||.||+++...|.++|.+..+ ++|||+++|+.| ..+.+|+|+++++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK 677 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC
Confidence 64 7999999999999999999999999999999999999999999998865 699999999976 5788999999986
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|..
T Consensus 678 -G~V~E~G~h 686 (716)
T KOG0058|consen 678 -GRVVEMGTH 686 (716)
T ss_pred -CeEEecccH
Confidence 799999964
No 140
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.7e-36 Score=336.67 Aligned_cols=212 Identities=26% Similarity=0.361 Sum_probs=179.2
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4677777663 2469999999999999999999999999999999999875 457999999987543
Q ss_pred c---c-ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000612 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1012 (1391)
. . .++.++|++|++.+++.+||+|++.+....+. ....+.++.++++++.+++.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 1 1 23468999999999999999999987643321 22334455678999999998776665 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999986 58889999999985 79999987
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 141
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.7e-36 Score=334.21 Aligned_cols=215 Identities=27% Similarity=0.409 Sum_probs=179.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4678888776421 011269999999999999999999999999999999999865 45899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
. ..+++.++|++|++.+++.+||+|++.+....+. ....+.++.++++++.+++.+..+.. +..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 3 2345679999999988888999999987654331 23344556788999999998877765 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 6877654
No 142
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.4e-36 Score=337.74 Aligned_cols=214 Identities=27% Similarity=0.392 Sum_probs=172.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 4999999999999999999999999999999999999988 9999999998765432 24599999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++....+... ..+. . ... ...+....++++++.+||++..++. +
T Consensus 91 tv~~~l~~~~~~~~~~~-------~~~~---~---~~~-----------~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 91 TVLENVMVAAQARTGSG-------LLLA---R---ARR-----------EEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CHHHHHHHHHhhccccc-------cccc---c---ccc-----------cHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 99999988754321000 0000 0 000 0011123467789999998766554 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.. . +.+|+.++|+..++.+.+|++++|++|
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999998754 3 445666788889999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+++++.
T Consensus 220 ~i~~~~~~~~~~ 231 (236)
T cd03219 220 RVIAEGTPDEVR 231 (236)
T ss_pred EEEeecCHHHhc
Confidence 999999988763
No 143
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-36 Score=354.08 Aligned_cols=214 Identities=24% Similarity=0.363 Sum_probs=186.8
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488899987763 2468999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
.. ...+|.+|||+|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..+.. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999976543 234455667789999999999887776 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 68899999999985 79999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
+
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 6
No 144
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-36 Score=356.32 Aligned_cols=214 Identities=25% Similarity=0.372 Sum_probs=184.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887763 2468999999999999999999999999999999999875 4589999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
... ..++.+||++|+..+++.+||+||+.|....+. .+.++.+++++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 431 234679999999999999999999998765432 234455567899999999988777763 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 57889999999985 79999998
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 6
No 145
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=312.86 Aligned_cols=206 Identities=30% Similarity=0.444 Sum_probs=174.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc---ceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 242 (1391)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++.+||.+++.+.+. +.-+..+|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 4999999999999999999999999999999999999998 99999999999888764 56789999988877789
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+|-+.+++.-.+.+.. ..+...+++..|...++.+.+. +..+
T Consensus 92 v~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~-----R~y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAG-----RDYR 134 (259)
T ss_pred HHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhc-----cchh
Confidence 99999998743322111 0112234666777777776654 4456
Q ss_pred cCChhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 323 GISGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~------~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. + ..|+.+.|+..-+..+||+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheee
Confidence 799999999999999986 44689999999999999999999999999863 3 566668899999999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000612 397 LLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1391)
+|++||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999999875
No 146
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-36 Score=336.40 Aligned_cols=205 Identities=30% Similarity=0.408 Sum_probs=171.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1391)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 5999999999999999999999999999999999999998 9999999998754321 357999999998899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+|++||+.+.....+... .+....++++++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988653321100 001123567889999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINR-ELGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 334556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 147
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-36 Score=357.40 Aligned_cols=255 Identities=27% Similarity=0.394 Sum_probs=194.7
Q ss_pred HhhHHHHHHhhhccccChHHHHHHHHHHHhh-cCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 79 QERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
+...+..|++....+.+++. ...-.+ .-...|.++++.+||++.++.
T Consensus 285 ~~g~aa~d~i~~~l~~~~~~-----~~~~~~~~~~~~~~~ei~~~~l~~~y~~--------------------------- 332 (559)
T COG4988 285 AAGEAAADKLFTLLESPVAT-----PGSGEKAEVANEPPIEISLENLSFRYPD--------------------------- 332 (559)
T ss_pred hhhhhHHHHHHHHhcCCCCC-----CCCccccccccCCCceeeecceEEecCC---------------------------
Confidence 34466666666666665541 111111 112346889999999998743
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
. +++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+.++ +++++||+|+
T Consensus 333 ---g---~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~ 403 (559)
T COG4988 333 ---G---KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQN 403 (559)
T ss_pred ---C---CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCC
Confidence 1 15899999999999999999999999999999999999998 9999999999877764 5899999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.++ ..|+||||.++..- ...+.+.++.++. .+.+.+.-+++.||
T Consensus 404 p~lf-~gTireNi~l~~~~----~s~e~i~~al~~a------------------------------~l~~~v~~p~GLdt 448 (559)
T COG4988 404 PYLF-AGTIRENILLARPD----ASDEEIIAALDQA------------------------------GLLEFVPKPDGLDT 448 (559)
T ss_pred Cccc-cccHHHHhhccCCc----CCHHHHHHHHHHh------------------------------cHHHhhcCCCcccc
Confidence 7544 57999999987521 1112222221111 11222223567899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ ++|||||+|||++||||+.+++++++||||++||.+|+..|.+.|.++++ ++|+++ ++| +.+...-+|+
T Consensus 449 ~ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itH-rl~~~~~~D~ 523 (559)
T COG4988 449 VIGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITH-RLEDAADADR 523 (559)
T ss_pred hhccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEc-ChHHHhcCCE
Confidence 999765 57999999999999999999999999999999999999999999998764 355555 444 4567778999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++++|.++++.+
T Consensus 524 I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 524 IVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EEEecCCceeccCCHHHHhh
Confidence 99999999999999999854
No 148
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.4e-36 Score=331.68 Aligned_cols=199 Identities=31% Similarity=0.434 Sum_probs=167.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 4999999999999999999999999999999999999988 9999999988754332 35799999998888899999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.++.+..+... .+....++++++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988654321100 001124567788999987666554 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445556788888999999999999999999
Q ss_pred Eec
Q 000612 405 YQG 407 (1391)
Q Consensus 405 ~~G 407 (1391)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 149
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-37 Score=355.86 Aligned_cols=257 Identities=23% Similarity=0.336 Sum_probs=197.5
Q ss_pred chHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhh
Q 000612 77 GLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1391)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1391)
..++...+..|+-++.++++|. + .+.-..+.+...++++||+++++.
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~-----~--~~~~~~~~~~~~l~~~~vsF~y~~-------------------------- 348 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEV-----T--FPDEQTATTGQALELRNVSFTYPG-------------------------- 348 (573)
T ss_pred HhhHHHHHHHHHhhhccCCccc-----C--CCccccCCccceeeeccceeecCC--------------------------
Confidence 3456777888888888888772 1 111122222226999999999864
Q ss_pred hcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000612 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1391)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1391)
++.++|+|+|+++++||.++|+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.+++++|
T Consensus 349 ------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Q 419 (573)
T COG4987 349 ------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQ 419 (573)
T ss_pred ------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhcc
Confidence 2234999999999999999999999999999999999999999 9999999999877765 467999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 234 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
..|+...|+|+||.++.. +...+.+.++.++ .+ .++.+ .+.++..|
T Consensus 420 -r~hlF~~Tlr~NL~lA~~----~AsDEel~~aL~q---vg------------------------L~~l~--~~~p~gl~ 465 (573)
T COG4987 420 -RVHLFSGTLRDNLRLANP----DASDEELWAALQQ---VG------------------------LEKLL--ESAPDGLN 465 (573)
T ss_pred -chHHHHHHHHHHHhhcCC----CCCHHHHHHHHHH---cC------------------------HHHHH--HhChhhhh
Confidence 567778899999987642 1222222221111 00 01111 23456778
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
|.+|+.+ +.||||||||++|||+|+++.++++|||||.|||+.|+.++++.|.+-+ .++|+++ ++|+... .+.||
T Consensus 466 t~lge~G-~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~~-le~~d 540 (573)
T COG4987 466 TWLGEGG-RRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLRG-LERMD 540 (573)
T ss_pred chhccCC-CcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eeccccc-HhhcC
Confidence 9999765 4699999999999999999999999999999999999999999998743 4556555 5666544 46799
Q ss_pred eEEEEcCCeEEEecChhHHHH
Q 000612 394 DIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|++|++|+++++|++.++++
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999999875
No 150
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=344.92 Aligned_cols=224 Identities=27% Similarity=0.381 Sum_probs=179.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCC-CC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-NH 237 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1391)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 4999999999999999999999999999999999999998 99999999987521 1235799999986 24
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1391)
+...||.||+.|+....+... .+...++.++++.+||. ...+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~--- 139 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWE--- 139 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhcc---
Confidence 445799999998764332100 01123456788899995 3444
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
+.++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||+|+
T Consensus 140 --~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 140 --KSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred --CCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 4556668888899999999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCCCCChHHHH
Q 000612 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADFL 433 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~cp~~~~~adfl 433 (1391)
+|++|+++++|+++++.. .++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 999999999999998743 3456677766654444433
No 151
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.3e-36 Score=333.06 Aligned_cols=221 Identities=35% Similarity=0.603 Sum_probs=181.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC-CeEEEEEEEcCccC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 934 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1391)
+.|+|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|.... .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 45788888774210 135799999999999999999999999999999999997641 23589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDE-VMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
.....++.++|++|++.+++.+||+||+.|............+.....+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556789999999999999999999998765433221122222334555 88999988776654 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777999999999985468899999999986 7888765
No 152
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.4e-36 Score=352.93 Aligned_cols=202 Identities=25% Similarity=0.304 Sum_probs=177.8
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc---cc----cceEEEeccCCCC
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---TF----ARISGYCEQNDIH 952 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~~ 952 (1391)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4569999999999999999999999999999999999876 4689999999886532 22 5689999999999
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000612 953 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1391)
Q Consensus 953 ~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLD 1032 (1391)
+|.+||+||+.|..... ..+.+++++++.++++.++|.+..+..+ ..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 2345566778899999999988777763 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1033 EPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|||++||+.++..+++.++++.++ |+|||++||++. ++.+.+|++++|++ |+++..|++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999999754 899999999986 57889999999985 799999985
No 153
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.3e-36 Score=347.43 Aligned_cols=212 Identities=23% Similarity=0.364 Sum_probs=183.7
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|++.+++ ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67788887763 2469999999999999999999999999999999999875 45899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++..+.++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998765542 233444556889999999998887764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999986 58889999999985 799999986
No 154
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.4e-36 Score=357.04 Aligned_cols=217 Identities=26% Similarity=0.359 Sum_probs=184.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 367888888763 2569999999999999999999999999999999999875 4589999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..+++.+||++|+..+++.+||+|++.++...... .....+..++.++++++.+++.+..++. ++.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCH
Confidence 43 34567899999999988899999999885321110 0111233456789999999999888776 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||+.|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57789999999985 799999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 221 G~~ 223 (402)
T PRK09536 221 GPP 223 (402)
T ss_pred cCH
Confidence 986
No 155
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.1e-36 Score=390.59 Aligned_cols=253 Identities=24% Similarity=0.323 Sum_probs=195.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+..++|+.++++.++|.- . +....+.....++|+||++.+..
T Consensus 418 ~~~~~~~~~ri~~~l~~~~e~~-----~--~~~~~~~~~~~I~~~nvsf~Y~~--------------------------- 463 (686)
T TIGR03797 418 ILAVIPLWERAKPILEALPEVD-----E--AKTDPGKLSGAIEVDRVTFRYRP--------------------------- 463 (686)
T ss_pred HHHHHHHHHHHHHHhcCCcccc-----c--CcCCCCCCCceEEEEEEEEEcCC---------------------------
Confidence 5677888888888877655410 0 00001112347999999999842
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
..+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 464 -----~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 535 (686)
T TIGR03797 464 -----DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQN 535 (686)
T ss_pred -----CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccC
Confidence 1134999999999999999999999999999999999999998 9999999999987665 4789999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+| +.|++|||.++.. ...+.+.++++. .++ ++. .-.+++..||
T Consensus 536 ~~lf-~gTI~eNi~~~~~-----~~~e~i~~al~~---a~l------------------------~~~--i~~lp~G~dt 580 (686)
T TIGR03797 536 GRLM-SGSIFENIAGGAP-----LTLDEAWEAARM---AGL------------------------AED--IRAMPMGMHT 580 (686)
T ss_pred CccC-cccHHHHHhcCCC-----CCHHHHHHHHHH---cCc------------------------HHH--HHhccccccc
Confidence 7655 5799999998642 111222222211 111 111 1246778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++.+|.+.|+++ ++|+|+ ++|.. ++.+.+|+
T Consensus 581 ~ige~G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~ 653 (686)
T TIGR03797 581 VISEGG-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADR 653 (686)
T ss_pred cccCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCE
Confidence 999875 469999999999999999999999999999999999999999999873 345555 55543 66778999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++++|+++++++
T Consensus 654 Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 654 IYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999864
No 156
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.1e-36 Score=330.58 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=174.8
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4677777663 2469999999999999999999999999999999999865 458999999987543
Q ss_pred -ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000612 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 937 -~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
...++.++|++|++.+++.+||+|++.+....+. . .++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2345679999999988889999999988654321 1 1345788999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877999999999986 46678999999985 7888765
No 157
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.6e-36 Score=333.79 Aligned_cols=194 Identities=25% Similarity=0.384 Sum_probs=163.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 5999999999999999999999999999999999999998 999999998875432 1357999999998899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++.+..+... .+....++++++.+||++..+..+
T Consensus 94 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP--- 136 (216)
T ss_pred cccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754322100 001124567889999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.+++|++++|+
T Consensus 137 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 137 --MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998753 3 4556668888899999999999999
Q ss_pred CCeE
Q 000612 400 DGQI 403 (1391)
Q Consensus 400 ~G~i 403 (1391)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9974
No 158
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.7e-36 Score=334.77 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=176.8
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCC-----CCCeEEEEEEEcC
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 931 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g 931 (1391)
+++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4677777653 235999999999999999999999999999999999986 4 4689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ..+++.++|++|++.++ .+||+||+.+....+.. ....+.++.++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 23456799999998877 79999999886543321 1122234568899999999876655421 25
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999876 99999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9999875
No 159
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-36 Score=331.97 Aligned_cols=200 Identities=30% Similarity=0.404 Sum_probs=167.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 244 (1391)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 45999999999999999999999999999999999999988 9999999988753 246799999998888889999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.++....+... .+....++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988654322100 001123567889999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~--~G~ 402 (1391)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+.+|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999875433 4455667888888999999999999 799
Q ss_pred EEEecCh
Q 000612 403 IVYQGPR 409 (1391)
Q Consensus 403 iv~~G~~ 409 (1391)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988865
No 160
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=9.4e-36 Score=345.95 Aligned_cols=205 Identities=27% Similarity=0.391 Sum_probs=175.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1391)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 34999999999999999999999999999999999999998 999999998875422 2357999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.|.+++.+... ++....++++++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765433110 0112245678999999987776654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||+||+++|++|+|||||+|||+.++..+.+.|+++. .+ ++|+.++|+.+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 599999999999999999999999999999999999999999999873 34 556668899999999999999999999
Q ss_pred EEEecChhHHHH
Q 000612 403 IVYQGPRELVLE 414 (1391)
Q Consensus 403 iv~~G~~~~~~~ 414 (1391)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998765
No 161
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.2e-36 Score=334.70 Aligned_cols=204 Identities=22% Similarity=0.383 Sum_probs=171.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 4999999999999999999999999999999999999998 9999999988754332 24699999999899999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.+.....+.. . .+....++++++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 131 (232)
T cd03218 91 TVEENILAVLEIRGLS-K---------------------------------KEREEKLEELLEEFHITHLRKSKA----- 131 (232)
T ss_pred cHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 9999998764322110 0 001124567888999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ . +++|+.++|+..++.+++|++++|++|
T Consensus 132 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 132 SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYEG 209 (232)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 445666788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+.+++.
T Consensus 210 ~i~~~~~~~~~~ 221 (232)
T cd03218 210 KVLAEGTPEEIA 221 (232)
T ss_pred eEEEEeCHHHhh
Confidence 999999987653
No 162
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-36 Score=335.09 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=181.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677887766410 001269999999999999999999999999999999999876 45799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. ..++.++|++|++.+++.+|+.|++.+....+. .......+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 31 235679999999999899999999988654332 23334455688999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 47788999999985 7999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 99874
No 163
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-37 Score=314.80 Aligned_cols=210 Identities=22% Similarity=0.378 Sum_probs=180.1
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1391)
+++++++|||+.+++||+++|+|||||||||.+.++.|+..|+ +|+|.+||.+++.+... .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4466999999999999999999999999999999999999999 99999999999887653 3589999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
-.+||+|||.-....+.... ...+.+.+.+.+|+.|+|.++++..-
T Consensus 92 r~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a-- 137 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKA-- 137 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCcc--
Confidence 99999999986554331100 00112335678999999999888653
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
-.||||||+|+.|||||+.+|+.++||||++|+||.+..+|.+.++.+.. ++.-|+++-|...|+...+||.+++
T Consensus 138 ---~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 138 ---YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ---cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEE
Confidence 35999999999999999999999999999999999999999999998754 3444555788999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000612 399 SDGQIVYQGPRELVLE 414 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1391)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998864
No 164
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-36 Score=337.38 Aligned_cols=216 Identities=26% Similarity=0.316 Sum_probs=177.2
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 4677776653 11469999999999999999999999999999999999865 457999999987542
Q ss_pred ------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 937 ------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
...++.++|++|++.+++.+||+|++.+..... ..........++.++++++.++|.+..+.. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 124567999999998888899999998753210 000111123345678899999998766654 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999987 47778999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 799999875
No 165
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.2e-36 Score=331.90 Aligned_cols=207 Identities=29% Similarity=0.407 Sum_probs=171.9
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~~---------~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGGG---------EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCCC---------cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 5678877764110 11469999999999999999999999999999999999875 458999999987543
Q ss_pred cc-------ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 937 ET-------FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 937 ~~-------~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHY-----PSELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcC-----hhhcC
Confidence 11 24579999999998899999999998754432 22333455688999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|++|
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~G 216 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeCC
Confidence 9999999999999999999999999999999999999999999976 58999999999863 4 489999999864
No 166
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-35 Score=334.69 Aligned_cols=214 Identities=22% Similarity=0.334 Sum_probs=180.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 46778877663 2469999999999999999999999999999999999865 46899999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 936 Q-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
. ...++.++|++|++..++.+||.|++.+...... .....+.++.+.++++.++|.+..+.. +..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2345679999999988888999999987542111 123344456688999999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 46778999999985 799999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 885
No 167
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=331.82 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=179.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++... ....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~~---------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEGS---------VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCCC---------cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 378899988874210 11469999999999999999999999999999999999865 4689999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000612 935 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1391)
Q Consensus 935 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1391)
.... . ++.++|++|++.+++.+|++|++.+....+ ....++.+++++++++.++|.+..+.. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4311 2 256999999998888899999998865432 122334456788999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 58999999999863 4 45689999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9999885
No 168
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=341.04 Aligned_cols=204 Identities=23% Similarity=0.335 Sum_probs=169.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCC-CCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1391)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998764332 35799999986 367788
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.|+.+..+... .+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999998754322110 011224577899999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999876433 44555577777777 589999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13650 217 QVESTSTPRELF 228 (279)
T ss_pred EEEEECCHHHHH
Confidence 999999998765
No 169
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=342.87 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=180.8
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67889988874210 011369999999999999999999999999999999999876 45899999998764
Q ss_pred c-----ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000612 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN--PLRQSLVGLPGVSG 1007 (1391)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 1007 (1391)
. ...++.+||++|++. .+...||+|++.|..... ..+.++..+.++++++.+||. +..+.. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134568999999863 334579999999865432 234555566789999999996 555554 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 46788999999986 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999985
No 170
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.2e-36 Score=330.06 Aligned_cols=206 Identities=25% Similarity=0.341 Sum_probs=173.5
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 46778877763 12369999999999999999999999999999999999865 45899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. .+++.++|++|++.+++.+|+.|++.+....+. ......++.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 245679999999988889999999988754321 22334456688999999998766655 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999864
No 171
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5e-36 Score=329.75 Aligned_cols=192 Identities=28% Similarity=0.388 Sum_probs=163.0
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCC-CCCCCcHH
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTIY 959 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 959 (1391)
+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+......++.+||++|++. .+...|+.
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 358999999999999999999999999999999999865 468999999987644344567999999974 33467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000612 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1391)
Q Consensus 960 e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD 1039 (1391)
||+.+..... . . ..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~--~---~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL--D---A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc--C---c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 1245788999999988777653 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1040 ~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 46678999999986 5653
No 172
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.6e-36 Score=331.76 Aligned_cols=203 Identities=31% Similarity=0.444 Sum_probs=170.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1391)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 35999999999999999999999999999999999999998 999999998875321 2356999999988888999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.+..+..+... .+....++++++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 9999988654332100 001123567788999987766654 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998743 3 556667888889999999999999999
Q ss_pred EEEecChhHH
Q 000612 403 IVYQGPRELV 412 (1391)
Q Consensus 403 iv~~G~~~~~ 412 (1391)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 173
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.6e-35 Score=336.13 Aligned_cols=214 Identities=26% Similarity=0.359 Sum_probs=180.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887763 2359999999999999999999999999999999999865 45799999997653
Q ss_pred c-----------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000612 936 Q-----------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1391)
Q Consensus 936 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1391)
. ...++.++|++|++.+++..|+.|++.+...... ....+..++.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235679999999988888999999987543211 123344456688999999998776654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 799999875
No 174
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.25 Aligned_cols=203 Identities=26% Similarity=0.337 Sum_probs=169.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1391)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4999999999999999999999999999999999999998 9999999998764332 356999999863 45678
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.|+....+... .+....++++++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999998643221100 011224567889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|+.+++.+.||+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666888899999999999999999
Q ss_pred eEEEecChhHH
Q 000612 402 QIVYQGPRELV 412 (1391)
Q Consensus 402 ~iv~~G~~~~~ 412 (1391)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 175
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-35 Score=330.63 Aligned_cols=213 Identities=24% Similarity=0.387 Sum_probs=178.9
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++. +.+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 56777776631 11469999999999999999999999999999999999865 458999999987643
Q ss_pred --ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
..+++.++|++|++.+++.+|++|++.+....+. ...++..+.++++++.++|.+..++.+ ..||+||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345679999999988889999999988654432 223334456889999999987776653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999875 699999999986 46678999999985 799998875
No 176
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-35 Score=331.53 Aligned_cols=202 Identities=25% Similarity=0.415 Sum_probs=167.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 5999999999999999999999999999999999999998 9999999988755432 35699999999899999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCcccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1391)
||+||+.++....+ .. + ....++.+++.+ ++++..++.
T Consensus 91 t~~~~l~~~~~~~~--~~-----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~----- 129 (222)
T cd03224 91 TVEENLLLGAYARR--RA-----K-----------------------------RKARLERVYELFPRLKERRKQL----- 129 (222)
T ss_pred cHHHHHHHHhhhcC--ch-----h-----------------------------HHHHHHHHHHHHHhhhhhhhCc-----
Confidence 99999988653221 00 0 011234455666 465555544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++++|++
T Consensus 130 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 130 AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 446999999999999999999999999999999999999999999998754 3 45566678888999999999999999
Q ss_pred CeEEEecChhHHH
Q 000612 401 GQIVYQGPRELVL 413 (1391)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1391)
|++++.|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (222)
T cd03224 208 GRVVLEGTAAELL 220 (222)
T ss_pred CeEEEeCCHHHHh
Confidence 9999999987653
No 177
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.9e-35 Score=338.47 Aligned_cols=206 Identities=21% Similarity=0.357 Sum_probs=171.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 21 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 97 (269)
T PRK11831 21 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFT 97 (269)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 356999999988899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++..... ... + .+....++.+++.+||++..+..+
T Consensus 98 ~~tv~enl~~~~~~~~-~~~--------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 141 (269)
T PRK11831 98 DMNVFDNVAYPLREHT-QLP--------A------------------------PLLHSTVMMKLEAVGLRGAAKLMP--- 141 (269)
T ss_pred CCCHHHHHHHHHHHcc-CCC--------H------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999987642210 000 0 001123566788999987766554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++||.++|+..++.+++|++++|+
T Consensus 142 --~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiiivsH~~~~~~~~~d~v~~l~ 218 (269)
T PRK11831 142 --SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNS-ALGVTCVVVSHDVPEVLSIADHAYIVA 218 (269)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCcEEEEEecCHHHHHHhhCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 334556667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (269)
T PRK11831 219 DKKIVAHGSAQALQ 232 (269)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 178
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=335.05 Aligned_cols=214 Identities=30% Similarity=0.411 Sum_probs=171.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1391)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 35999999999999999999999999999999999999988 999999998876543 135799999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.++..... . . .... .+.. .......++.+++.+||++..++.
T Consensus 91 ~~~tv~~~l~~~~~~~~-~-~---~~~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~--- 141 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-S-T---WRSL------FGLF---------------PKEEKQRALAALERVGLLDKAYQR--- 141 (241)
T ss_pred ccCcHHHHHHhhhcccc-h-h---hhhh------cccC---------------cHHHHHHHHHHHHHcCChhhhCCC---
Confidence 99999999987542110 0 0 0000 0000 001123456788999997655544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++... +++||.++|+.+++.+++|++++|
T Consensus 142 --~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 142 --ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 45699999999999999999999999999999999999999999999876433 445666888889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 179
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-35 Score=353.18 Aligned_cols=208 Identities=26% Similarity=0.441 Sum_probs=174.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+|
T Consensus 17 ~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~t 93 (402)
T PRK09536 17 TVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFD 93 (402)
T ss_pred EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCC
Confidence 5999999999999999999999999999999999999998 9999999998765432 367999999998889999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.++..-.. + ... . ...+...+++++++.+||.+..++.+ +
T Consensus 94 v~e~v~~~~~~~~-~-~~~---------------~-------------~~~~~~~~v~~~le~vgl~~~~~~~~-----~ 138 (402)
T PRK09536 94 VRQVVEMGRTPHR-S-RFD---------------T-------------WTETDRAAVERAMERTGVAQFADRPV-----T 138 (402)
T ss_pred HHHHHHhccchhc-c-ccc---------------C-------------CCHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 9999988642110 0 000 0 00011235678899999987776544 5
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||.|||||+++|++|+|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++.++||++++|++|+
T Consensus 139 ~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 139 SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 34 456668899999999999999999999
Q ss_pred EEEecChhHHH
Q 000612 403 IVYQGPRELVL 413 (1391)
Q Consensus 403 iv~~G~~~~~~ 413 (1391)
+++.|++++++
T Consensus 217 iv~~G~~~ev~ 227 (402)
T PRK09536 217 VRAAGPPADVL 227 (402)
T ss_pred EEEecCHHHHh
Confidence 99999998864
No 180
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.6e-36 Score=333.74 Aligned_cols=203 Identities=25% Similarity=0.367 Sum_probs=168.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 4999999999999999999999999999999999999 777 999999998875432 235799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.++ .+||+||+.++.+..+.... .+....++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 777 89999999886543211000 00112456778899998665543
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . ++||.++|+.+++.+++|++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 20 357999999999999999999999999999999999999999999998754 3 55666888889999999999
Q ss_pred EEEcCCeEEEecChhH
Q 000612 396 ILLSDGQIVYQGPREL 411 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~ 411 (1391)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 181
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=328.29 Aligned_cols=197 Identities=27% Similarity=0.415 Sum_probs=166.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE 245 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 14 TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 4999999999999999999999999999999999999988 9999999987653 23467999999988889999999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.+.....+... .+....++++++.+||++..++.+ +.||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (210)
T cd03269 90 QLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EELS 130 (210)
T ss_pred HHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhCC
Confidence 9987654322100 001124567888999987666544 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1391)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 131 KGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999999999998754 3 4556668888899999999999999999987
Q ss_pred ec
Q 000612 406 QG 407 (1391)
Q Consensus 406 ~G 407 (1391)
.|
T Consensus 209 ~~ 210 (210)
T cd03269 209 YG 210 (210)
T ss_pred cC
Confidence 65
No 182
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-35 Score=329.06 Aligned_cols=205 Identities=25% Similarity=0.363 Sum_probs=172.6
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12369999999999999999999999999999999999865 458999999987542
Q ss_pred c------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 937 E------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 937 ~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
. ..++.++|++|++.+++.+|++|++.+....+. ...++.++.++++++.+++.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCH
Confidence 1 245679999999999999999999988654332 23344456688999999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999777999999999986 466789999999863
No 183
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=334.52 Aligned_cols=213 Identities=27% Similarity=0.374 Sum_probs=179.0
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 46777776631 1358999999999999999999999999999999999865 457999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHH
Q 000612 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~lSgG 1011 (1391)
...++.++|++|++.+++.+||+||+.+....+. .+.+...+.+.++++.+++.+ ..+.. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345679999999999989999999988654331 233444566889999999985 55554 4679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999986 57788999999985 799999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 184
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=334.03 Aligned_cols=206 Identities=28% Similarity=0.424 Sum_probs=171.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1391)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 34999999999999999999999999999999999999988 9999999988754332 35799999999899999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc--ccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV--CADTMVGDE 319 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 319 (1391)
||+||+.++.+..+... .+....++++++.+||++ ..+ +
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~-----~ 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFAD-----R 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHh-----c
Confidence 99999988654321100 001123567788999975 444 3
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ..+++||.++|+..++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQ-ELGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4457999999999999999999999999999999999999999999998764 324556667888888999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 185
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=344.96 Aligned_cols=217 Identities=22% Similarity=0.415 Sum_probs=173.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-------------------Ccc
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------------------VPQ 225 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1391)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999998 99999999876432 113
Q ss_pred ceEEEEcCCCC-CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 000612 226 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1391)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1391)
+.++||+|++. .+...||+||+.|+....+.. . ++...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 67999999862 333469999998875322110 0 011224567888
Q ss_pred HcCCc-ccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEec
Q 000612 305 VLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQ 383 (1391)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q 383 (1391)
.+||+ ...+ +.+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|
T Consensus 162 ~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 3344 34457999999999999999999999999999999999999999999998753 3 455666888
Q ss_pred CchhHHhhcCeEEEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000612 384 PAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1391)
Q Consensus 384 ~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~---~f~~~G~~cp~ 425 (1391)
+..++.+.+|+|++|++|++++.|+++++.. .++..|+.+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 8888999999999999999999999988742 34445555444
No 186
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=339.31 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=174.2
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1391)
..+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3456999999999999999999999999999999999999998 9999999988754321 24699999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+++.+||+||+.++....+... .+....++++++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 88989999999988654322100 00112356788999998766665
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
++ .|||||||||+||+||+.+|++|||||||+|||..++..+.+.|+++.+.. +.+|+.++|+..++.+++|++
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEE
Confidence 54 599999999999999999999999999999999999999999999876433 445666788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 187
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=343.51 Aligned_cols=205 Identities=26% Similarity=0.374 Sum_probs=169.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC-----------------------
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----------------------- 221 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 221 (1391)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 8999999875421
Q ss_pred ----cCccceEEEEcCCC-CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHH
Q 000612 222 ----FVPQRTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEAN 296 (1391)
Q Consensus 222 ----~~~~~~~~yv~Q~d-~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~ 296 (1391)
...++.+|||+|++ ..+...||+||+.|+....+... ++..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 01135799999985 34556899999998754332110 0112
Q ss_pred HHHHHHHHHcCCc-ccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCC
Q 000612 297 VITDYYLKVLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSG 375 (1391)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~ 375 (1391)
.+++++++.+||+ +..+. .+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~-----~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQR-----SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhC-----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3467789999996 44554 4556999999999999999999999999999999999999999999998753 3 4
Q ss_pred eEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHH
Q 000612 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 376 t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
.+|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666889999999999999999999999999998874
No 188
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.5e-36 Score=388.10 Aligned_cols=258 Identities=25% Similarity=0.393 Sum_probs=198.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+..++|+.++++.++|. .........+....+++|+||++.++.
T Consensus 428 ~~~~~~~~~ri~~il~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~Y~~--------------------------- 475 (694)
T TIGR03375 428 YQQAKTALQSLDELMQLPVER-----PEGTRFLHRPRLQGEIEFRNVSFAYPG--------------------------- 475 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCCCccceEEEEEEEEEeCC---------------------------
Confidence 678888999999888876541 000000001112347999999999842
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
...++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 476 -----~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~ 547 (694)
T TIGR03375 476 -----QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQD 547 (694)
T ss_pred -----CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCC
Confidence 1134999999999999999999999999999999999999998 9999999999887654 4789999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+| +.|++|||.++.. ....+.+.++++.. + .++.+ -.|++..||
T Consensus 548 ~~lf-~~TI~eNi~~~~~----~~~~~~i~~a~~~~---~------------------------l~~~i--~~lp~gl~T 593 (694)
T TIGR03375 548 PRLF-YGTLRDNIALGAP----YADDEEILRAAELA---G------------------------VTEFV--RRHPDGLDM 593 (694)
T ss_pred hhhh-hhhHHHHHhCCCC----CCCHHHHHHHHHHc---C------------------------hHHHH--HhCcccccc
Confidence 7655 4799999987631 11112222221111 0 11112 246788899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+. .||||||||++|||||+++|++++||||||+||+.++..|.+.|++.. .++|+|+ ++|.. ++.+.||+
T Consensus 594 ~i~e~G~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~ii-ItHrl-~~~~~~D~ 668 (694)
T TIGR03375 594 QIGERGR-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVL-VTHRT-SLLDLVDR 668 (694)
T ss_pred eecCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCH-HHHHhCCE
Confidence 9998754 699999999999999999999999999999999999999999998863 3456555 45543 56789999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++++|+++++++
T Consensus 669 iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 669 IIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999875
No 189
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.7e-36 Score=330.85 Aligned_cols=195 Identities=29% Similarity=0.417 Sum_probs=161.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1391)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 45999999999999999999999999999999999999998 9999999988765431 3579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
++.+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998754322100 001123567889999987666544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++. .+|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEE
Confidence 469999999999999999999999999999999999999999999987642 2445555777777776 9999999
Q ss_pred EcCCeE
Q 000612 398 LSDGQI 403 (1391)
Q Consensus 398 L~~G~i 403 (1391)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 190
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.25 Aligned_cols=215 Identities=24% Similarity=0.328 Sum_probs=180.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|+++.++. ...+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 3778899887741 2359999999999999999999999999999999999865 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.+||++|++. .++..||.|++.|..... ..+.+..++.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223567999999863 345689999998864321 2333444566889999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46688999999985 799999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 191
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=330.38 Aligned_cols=201 Identities=25% Similarity=0.345 Sum_probs=165.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1391)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 45999999999999999999999999999999999999988 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
++.+||+||+.+.....+... .+...+++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998653221100 001124567889999987666543
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
+.|||||||||+||++++.+|++|||||||+|||+.++..+.+.|+++.+. .+++||.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 469999999999999999999999999999999999999999999987543 34555557778777766 589999
Q ss_pred EcCCeEEEecCh
Q 000612 398 LSDGQIVYQGPR 409 (1391)
Q Consensus 398 L~~G~iv~~G~~ 409 (1391)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 192
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.4e-35 Score=330.66 Aligned_cols=210 Identities=28% Similarity=0.417 Sum_probs=174.4
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCC
Confidence 4677776653 2368999999999999999999999999999999999875 457999999987543
Q ss_pred c---c-ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHH
Q 000612 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 937 ~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
. . .++.++|++|++.+++.+|++|++.+...... ..+.++.+.++++.+ ++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHH
Confidence 1 1 24569999999999999999999988654321 122334566778887 466655554 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999999877899999999986 47788999999985 7999988
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 75
No 193
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.2e-35 Score=345.34 Aligned_cols=208 Identities=23% Similarity=0.251 Sum_probs=173.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1391)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999998765432 35799999987 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1391)
+++.+||.||+.+..+....+.. ..+....++++++.+||+ +..+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~~--------------------------------~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKLS--------------------------------RQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCCC--------------------------------HHHHHHHHHHHHHHcCCChHHhc--
Confidence 78899999999886533210000 001123456788999994 3334
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+.+..|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+ ..+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQR-EMGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEE
Confidence 44567999999999999999999999999999999999999999999998754 33556677899999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 194
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.2e-35 Score=330.53 Aligned_cols=205 Identities=26% Similarity=0.382 Sum_probs=169.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc--cceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP--QRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lTV 243 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+||
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 15 RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 4999999999999999999999999999999999999998 9999999988754322 2479999999888889999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.+.....+... .+....++++++.+||++..++.++ .
T Consensus 92 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 132 (236)
T TIGR03864 92 RQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR-----E 132 (236)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999987643321100 0011235667889999876665544 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++++.. +++|+.++|+.+++. .+|++++|++|++
T Consensus 133 LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~-~~d~i~~l~~G~i 210 (236)
T TIGR03864 133 LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIE-ADDRLVVLHRGRV 210 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHh-hCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999876433 445566778888876 4999999999999
Q ss_pred EEecChhHHHH
Q 000612 404 VYQGPRELVLE 414 (1391)
Q Consensus 404 v~~G~~~~~~~ 414 (1391)
++.|+.+++.+
T Consensus 211 ~~~~~~~~~~~ 221 (236)
T TIGR03864 211 LADGAAAELRG 221 (236)
T ss_pred EEeCCHHHHHH
Confidence 99999887754
No 195
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1e-35 Score=336.39 Aligned_cols=217 Identities=24% Similarity=0.281 Sum_probs=177.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 45677776653 02358999999999999999999999999999999999875 45899999998753
Q ss_pred c------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000612 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1391)
Q Consensus 936 ~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1391)
. ..+++.++|++|++.+++.+||+|++.+..... ........+.+++++++++.++|.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 124567999999998888999999997642110 000111223345688899999998776664
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998754 899999999986 46788999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 789988875
No 196
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=333.91 Aligned_cols=212 Identities=27% Similarity=0.368 Sum_probs=178.8
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 46778877663 2468999999999999999999999999999999999865 45899999998764
Q ss_pred cccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000612 936 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 936 ~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
. ..+.+||++|++.+++.+||.|++.+....+. ....+.++.++++++.++|.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 23458999999988888999999987644321 23334456688999999998776654 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEec-CcEEEEecCC
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~-gG~~~y~G~~ 1093 (1391)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57788999999985 5899988765
No 197
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=338.44 Aligned_cols=203 Identities=25% Similarity=0.306 Sum_probs=173.0
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCC
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 951 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 951 (1391)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 34579999999999999999999999999999999999875 4579999999875421 1 1356999999998
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000612 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1391)
Q Consensus 952 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illL 1031 (1391)
+++.+||+|++.+...... ......++.++++++.++|.+..+..+ ..||||||||++||++|+.+|+||+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8889999999988654321 223344556889999999988777764 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1032 DEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 47788999999985 799999875
No 198
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-35 Score=377.15 Aligned_cols=253 Identities=19% Similarity=0.229 Sum_probs=194.4
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.....+|+.++.+.+++. . +....+....+++|+|+++.++.
T Consensus 308 ~~~~~~s~~ri~~~l~~~~~~------~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 352 (592)
T PRK10790 308 LQQAVVAGERVFELMDGPRQQ------Y--GNDDRPLQSGRIDIDNVSFAYRD--------------------------- 352 (592)
T ss_pred HHHHHHHHHHHHHHhcCCCcc------C--CCCccCCCCCeEEEEEEEEEeCC---------------------------
Confidence 467778888888877655431 0 00011112346999999998731
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
+ .++|+|+|+++++||.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++.++ ++.++||+|+
T Consensus 353 ---~---~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~ 423 (592)
T PRK10790 353 ---D---NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQD 423 (592)
T ss_pred ---C---CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 24999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+|+ .|++|||.++.. ...+.+.++++. .+ .++.++ .|++..||
T Consensus 424 ~~lF~-~Ti~~NI~~~~~-----~~d~~i~~a~~~---~g------------------------l~~~i~--~lp~Gldt 468 (592)
T PRK10790 424 PVVLA-DTFLANVTLGRD-----ISEEQVWQALET---VQ------------------------LAELAR--SLPDGLYT 468 (592)
T ss_pred Ccccc-chHHHHHHhCCC-----CCHHHHHHHHHH---cC------------------------cHHHHH--hccccccc
Confidence 87666 599999998631 111222222211 11 111222 26778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+. .||||||||++|||||+++|+|++||||||+||+.++..|.+.|+++. .++|+|++ +|.. +....+|+
T Consensus 469 ~i~e~g~-~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIiv-tHr~-~~l~~~D~ 543 (592)
T PRK10790 469 PLGEQGN-NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVI-AHRL-STIVEADT 543 (592)
T ss_pred cccCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEE-ecch-HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998863 34566654 4443 66778999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++..|+++++.+
T Consensus 544 ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 544 ILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999864
No 199
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=341.63 Aligned_cols=218 Identities=26% Similarity=0.300 Sum_probs=180.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++.... ....+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~--------~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKTP--------FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCCc--------ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 678999988852110 11359999999999999999999999999999999999875 45799999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000612 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1391)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1391)
. ...++.+|||+|++. .+...||.||+.|+.... ..+.++.+++++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999863 233479999999875322 233444456789999999996 555654 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 57788999999985 8
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999985
No 200
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4e-36 Score=389.82 Aligned_cols=261 Identities=22% Similarity=0.276 Sum_probs=196.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCC-CCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI-DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1391)
.++.+..++|+.++++.++|.-......+...... +.....++++|+++.+..
T Consensus 436 ~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-------------------------- 489 (710)
T TIGR03796 436 LQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP-------------------------- 489 (710)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC--------------------------
Confidence 56788889999988877655210000000000000 112357999999998742
Q ss_pred hcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000612 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1391)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1391)
..+++|+|+|++|++||.++|+||||||||||+|+|+|+++|+ +|+|.+||.++++... ++.++||+|
T Consensus 490 ------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q 560 (710)
T TIGR03796 490 ------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQ 560 (710)
T ss_pred ------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEec
Confidence 1134999999999999999999999999999999999999998 9999999999877654 578999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 234 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
++.+| +.|++|||.++.. ....+.+.++++.. + .++.+ -.+++..|
T Consensus 561 ~~~lf-~gTi~eNi~l~~~----~~~~~~i~~al~~~---~------------------------l~~~i--~~lp~gl~ 606 (710)
T TIGR03796 561 DIFLF-EGTVRDNLTLWDP----TIPDADLVRACKDA---A------------------------IHDVI--TSRPGGYD 606 (710)
T ss_pred CChhh-hccHHHHhhCCCC----CCCHHHHHHHHHHh---C------------------------CHHHH--HhCcCccc
Confidence 87655 5799999987521 11122222222111 1 11111 23677889
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
|.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++..|.+.|++ .++|+|+ ++|.. ++...+|
T Consensus 607 t~i~e~G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D 679 (710)
T TIGR03796 607 AELAEGG-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCD 679 (710)
T ss_pred ceeccCC-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCC
Confidence 9999876 47999999999999999999999999999999999999999999975 3456555 55544 5667799
Q ss_pred eEEEEcCCeEEEecChhHHHH
Q 000612 394 DIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|++|++|++++.|+++++++
T Consensus 680 ~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 680 EIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred EEEEEeCCEEEEecCHHHHHH
Confidence 999999999999999999875
No 201
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=340.58 Aligned_cols=206 Identities=21% Similarity=0.325 Sum_probs=169.5
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCC-
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN- 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1391)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999998 999999999875421 2457999999852
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1391)
.+...||+||+.|+....+... .+....++++++.+||+ +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334699999998653221100 01122456788999996 455543
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+.+|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQT-DENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998754 33556666888999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998764
No 202
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.1e-35 Score=336.66 Aligned_cols=215 Identities=19% Similarity=0.290 Sum_probs=181.0
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+|||||||||++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899988763 2468999999999999999999999999999999999875 4589999999875
Q ss_pred Ccc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000612 935 KQE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1391)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 1008 (1391)
... ..++.++|++|+..+++.+||.|++.+...... ..+.+..++.+.++++.++|.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 421 134569999999888888999999987543211 122333445678899999998877765 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1009 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999985 799
Q ss_pred EEecCC
Q 000612 1088 IYVGPL 1093 (1391)
Q Consensus 1088 ~y~G~~ 1093 (1391)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999885
No 203
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=344.21 Aligned_cols=256 Identities=27% Similarity=0.404 Sum_probs=203.1
Q ss_pred hhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcC
Q 000612 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIP 159 (1391)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 159 (1391)
.++..-+|+-+.+++.++ ..+++.+|.|+..+..|++++-- +
T Consensus 304 ~Ar~s~~Rl~~lL~~~p~--------~~~~m~LP~P~g~L~Ve~l~~~P-P----------------------------- 345 (580)
T COG4618 304 AARQSYKRLNELLAELPA--------AAERMPLPAPQGALSVERLTAAP-P----------------------------- 345 (580)
T ss_pred HHHHHHHHHHHHHHhCcc--------ccCCCCCCCCCceeeEeeeeecC-C-----------------------------
Confidence 445555566555555543 33467788899999999999721 1
Q ss_pred CccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCcc---ceEEEEcCCCC
Q 000612 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDN 236 (1391)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~ 236 (1391)
..++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++++++. +.+||.||+-.
T Consensus 346 --g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVe 420 (580)
T COG4618 346 --GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVE 420 (580)
T ss_pred --CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccce
Confidence 13357999999999999999999999999999999999999998 99999999999988764 78999999544
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1391)
+...||.|||. |+.. ....+.+.++++.... .++ ++.|++++||.|
T Consensus 421 -LF~GTIaeNIa---Rf~~-~~d~~kIieAA~lAgv---------------------------Hel--Il~lP~GYdT~i 466 (580)
T COG4618 421 -LFDGTIAENIA---RFGE-EADPEKVIEAARLAGV---------------------------HEL--ILRLPQGYDTRI 466 (580)
T ss_pred -ecCCcHHHHHH---hccc-cCCHHHHHHHHHHcCh---------------------------HHH--HHhCcCCccCcc
Confidence 45579999995 3321 1222334444333211 111 567999999999
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
|+.+. +||||||||+++||||+++|.+++||||-|+||+.....+.+.|.+.. ..++|+|+ ++ |++.+...+|+|+
T Consensus 467 G~~G~-~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvv-ia-HRPs~L~~~Dkil 542 (580)
T COG4618 467 GEGGA-TLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVV-IA-HRPSALASVDKIL 542 (580)
T ss_pred CCCCC-CCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEE-Ee-cCHHHHhhcceee
Confidence 98765 699999999999999999999999999999999999999999998864 34555554 44 3678999999999
Q ss_pred EEcCCeEEEecChhHHHHHH
Q 000612 397 LLSDGQIVYQGPRELVLEFF 416 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f 416 (1391)
+|++|++-.+|+.+|++...
T Consensus 543 vl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 543 VLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred eecCChHHhcCCHHHHHHHh
Confidence 99999999999999998754
No 204
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.3e-36 Score=388.31 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=196.4
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+..++|+.++.+.++|. .+..+....+....+++|+|+++.++.
T Consensus 438 ~~~~~~~~~ri~~~l~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~y~~--------------------------- 485 (708)
T TIGR01193 438 LQAARVANNRLNEVYLVDSEF-----INKKKRTELNNLNGDIVINDVSYSYGY--------------------------- 485 (708)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cccccccCCCCCCCcEEEEEEEEEcCC---------------------------
Confidence 567788889998888766551 000000111223457999999998731
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
.+++|+|+|++|++|+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|+
T Consensus 486 ------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 556 (708)
T TIGR01193 486 ------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQE 556 (708)
T ss_pred ------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecC
Confidence 124899999999999999999999999999999999999998 9999999999877654 4689999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+| +.||+|||.++.+. ....+.+.++++.. + .++.+ ..++...||
T Consensus 557 ~~lf-~gTI~eNi~l~~~~---~~~~~~i~~a~~~a---~------------------------l~~~i--~~lp~gldt 603 (708)
T TIGR01193 557 PYIF-SGSILENLLLGAKE---NVSQDEIWAACEIA---E------------------------IKDDI--ENMPLGYQT 603 (708)
T ss_pred ceeh-hHHHHHHHhccCCC---CCCHHHHHHHHHHh---C------------------------CHHHH--HhcccccCc
Confidence 7655 56999999986311 11112222222211 0 11112 246778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.||+.+ .+||||||||++||||++++|++|+||||||+||+.++..+.+.|++. .++|+|+ ++|.. ++.+.+|+
T Consensus 604 ~i~e~G-~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~ 677 (708)
T TIGR01193 604 ELSEEG-SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDK 677 (708)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCE
Confidence 999865 469999999999999999999999999999999999999999999863 3455555 55544 56788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|++++.|+++++++
T Consensus 678 i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 678 IIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999865
No 205
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-35 Score=334.85 Aligned_cols=212 Identities=27% Similarity=0.376 Sum_probs=170.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 16 QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 4999999999999999999999999999999999999988 999999998875432 1356999999988899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++..... ... .... +. ...+....++++++.+||.+..+..
T Consensus 93 ~~tv~~~l~~~~~~~~--~~~---~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~---- 142 (243)
T TIGR02315 93 RLTVLENVLHGRLGYK--PTW---RSLL------GR---------------FSEEDKERALSALERVGLADKAYQR---- 142 (243)
T ss_pred cccHHHHHhhcccccc--cch---hhhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC----
Confidence 9999999987532110 000 0000 00 0001123456788999998665544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+. .+++|+.++|+..++.++||++++|+
T Consensus 143 -~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l~ 220 (243)
T TIGR02315 143 -ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGLK 220 (243)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEE
Confidence 4569999999999999999999999999999999999999999999987543 34556667888889999999999999
Q ss_pred CCeEEEecChhHH
Q 000612 400 DGQIVYQGPRELV 412 (1391)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1391)
+|++++.|+++++
T Consensus 221 ~G~i~~~~~~~~~ 233 (243)
T TIGR02315 221 AGEIVFDGAPSEL 233 (243)
T ss_pred CCEEEecCCHHHh
Confidence 9999999998765
No 206
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.4e-36 Score=408.36 Aligned_cols=263 Identities=21% Similarity=0.287 Sum_probs=199.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCC-----CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHH
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-----LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDIL 152 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 152 (1391)
.+.+++..+|+.++++..++ +..+ +.-+.+ ....+|+|+||++.|..
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~-----~~~~-~~~~~~~~~~~~~~g~I~f~nVsF~Y~~---------------------- 1177 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSN-----IDVR-DNGGIRIKNKNDIKGKIEIMDVNFRYIS---------------------- 1177 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCc-----CCCC-CCcccccccCCCCCceEEEEEEEEECCC----------------------
Confidence 56778888898888876542 1000 001111 12357999999999842
Q ss_pred hHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC---------------------------
Q 000612 153 NYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--------------------------- 205 (1391)
Q Consensus 153 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------- 205 (1391)
+ ++.++|+|+|++|+||+.+||+||||||||||+++|.|+++|+
T Consensus 1178 --------~-~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 (1466)
T PTZ00265 1178 --------R-PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQ 1248 (1466)
T ss_pred --------C-CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence 1 1235999999999999999999999999999999999999981
Q ss_pred ------------------------CCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCc
Q 000612 206 ------------------------LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 258 (1391)
Q Consensus 206 ------------------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~ 258 (1391)
...+|+|++||+++.+... ++.++||+|++.+| +.||||||.++.. ..
T Consensus 1249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~----~a 1323 (1466)
T PTZ00265 1249 NVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE----DA 1323 (1466)
T ss_pred ccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC----CC
Confidence 0138999999999887664 57899999987665 6899999998742 12
Q ss_pred hhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHH
Q 000612 259 RYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMM 338 (1391)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al 338 (1391)
..+.+.++++.... ++. +..|++.+||.||+.+. .||||||||++|||||
T Consensus 1324 t~eeI~~A~k~A~l---------------------------~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARAL 1373 (1466)
T PTZ00265 1324 TREDVKRACKFAAI---------------------------DEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARAL 1373 (1466)
T ss_pred CHHHHHHHHHHcCC---------------------------HHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHH
Confidence 22333333332211 111 23589999999998765 5999999999999999
Q ss_pred hcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC----CeEE-EecChhHHH
Q 000612 339 VGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD----GQIV-YQGPRELVL 413 (1391)
Q Consensus 339 ~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~----G~iv-~~G~~~~~~ 413 (1391)
+++|+||+||||||+||+.++..|.+.|+++....++|+|+ ++|. .++.+.||+|++|++ |+++ ++|++++++
T Consensus 1374 lr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHR-lsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1374 LREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHR-IASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEE-Eech-HHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 99999999999999999999999999998864223456555 4554 367788999999999 9955 899999986
Q ss_pred H
Q 000612 414 E 414 (1391)
Q Consensus 414 ~ 414 (1391)
+
T Consensus 1452 ~ 1452 (1466)
T PTZ00265 1452 S 1452 (1466)
T ss_pred h
Confidence 4
No 207
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.9e-36 Score=376.80 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=192.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++..+..+|+.++++.+++ ..+.. .........+++|+|+++.++.
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~-----~~~~~-~~~~~~~~~~i~~~~v~f~y~~--------------------------- 350 (574)
T PRK11160 304 LGQVIASARRINEITEQKPE-----VTFPT-TSTAAADQVSLTLNNVSFTYPD--------------------------- 350 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCCCc-ccCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 45667778888887776554 11000 0001122457999999998732
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
.++++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 351 -----~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~ 422 (574)
T PRK11160 351 -----QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQR 422 (574)
T ss_pred -----CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEccc
Confidence 1124899999999999999999999999999999999999998 9999999999877654 4679999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+| +.|++||+.++.. ....+.+.++.+. .+ .++.+ -. +++.||
T Consensus 423 ~~lf-~~ti~~Ni~~~~~----~~~~~~i~~al~~---~~------------------------l~~~i--~~-p~GldT 467 (574)
T PRK11160 423 VHLF-SATLRDNLLLAAP----NASDEALIEVLQQ---VG------------------------LEKLL--ED-DKGLNA 467 (574)
T ss_pred chhh-cccHHHHhhcCCC----ccCHHHHHHHHHH---cC------------------------CHHHH--cC-ccccCc
Confidence 7655 5799999988641 1111111111111 00 01111 23 677899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ +.||||||||++||||++++|++|+||||||+||+.++..|.+.|++.. .++|+|+ ++|... ....+|+
T Consensus 468 ~vge~g-~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tvii-itHr~~-~~~~~d~ 542 (574)
T PRK11160 468 WLGEGG-RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLM-ITHRLT-GLEQFDR 542 (574)
T ss_pred hhcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEE-EecChh-HHHhCCE
Confidence 999865 4699999999999999999999999999999999999999999999863 3556665 445444 4567999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|++++.|+++++++
T Consensus 543 i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 543 ICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999865
No 208
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-35 Score=326.08 Aligned_cols=208 Identities=32% Similarity=0.477 Sum_probs=175.0
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ +..+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 5677777663 236999999999999 999999999999999999999865 458999999987543
Q ss_pred --ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
...++.++|++|++.+++.+||.|++.+....+. .+.++.++.++++++.++|.+..++. +..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHH
Confidence 2345679999999998899999999988654432 22333455688999999998777665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46678999999986 7887765
No 209
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.9e-35 Score=325.93 Aligned_cols=194 Identities=26% Similarity=0.397 Sum_probs=164.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-CccceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-VPQRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTVr 244 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+||+
T Consensus 14 ~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 14 RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 4999999999999999999999999999999999999988 99999999876532 1235799999998889999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.+.....+. ....++++++.+||++..++.+ +.|
T Consensus 91 e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (208)
T cd03268 91 ENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KGF 127 (208)
T ss_pred HHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hhC
Confidence 999876432110 0113456788899987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+|+.++|+..++.+++|++++|++|+++
T Consensus 128 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i~ 205 (208)
T cd03268 128 SLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKLI 205 (208)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 34 45566788889999999999999999998
Q ss_pred Eec
Q 000612 405 YQG 407 (1391)
Q Consensus 405 ~~G 407 (1391)
+.|
T Consensus 206 ~~g 208 (208)
T cd03268 206 EEG 208 (208)
T ss_pred ecC
Confidence 765
No 210
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=340.07 Aligned_cols=218 Identities=25% Similarity=0.339 Sum_probs=180.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 57889998885210 011358999999999999999999999999999999999875 45899999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000612 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1391)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1391)
. ..+++.+||++|++. .+...||.|++.|+.... ..+.++.++++.++++.++|. +..+.. +.
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 143 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PF 143 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cc
Confidence 1 234567999999862 333469999999875432 234455566789999999996 455544 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 144 ~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~ 221 (288)
T PRK13643 144 ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GH 221 (288)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 89999999999999999999999999999999999999999999999877999999999986 47788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 222 i~~~g~~ 228 (288)
T PRK13643 222 IISCGTP 228 (288)
T ss_pred EEEECCH
Confidence 9999986
No 211
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.6e-35 Score=343.74 Aligned_cols=214 Identities=21% Similarity=0.246 Sum_probs=175.7
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCC--
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD-- 235 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1391)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 459999999999999999999999999999999999998742238999999998765432 14699999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+.+.+||.+++.+....... .. ..+...++.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~-~~--------------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG-MS--------------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC-CC--------------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 688999999999765432210 00 00112345677889999754322
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+ ++.+++|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+ ..+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKR-EFNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEECCHHHHHHhCCEE
Confidence 2 356778999999999999999999999999999999999999999999998865 33566777899999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000612 396 ILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1391)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 212
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=341.74 Aligned_cols=218 Identities=25% Similarity=0.309 Sum_probs=179.9
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 67889998885210 011358999999999999999999999999999999999876 35799999876531
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000612 936 ---------------------------QETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVM 987 (1391)
Q Consensus 936 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l 987 (1391)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999999875432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000612 988 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1066 (1391)
Q Consensus 988 ~~l~L~-~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hq 1066 (1391)
+.+||. +..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566655 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1067 PSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1067 ps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
++ ++.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 47789999999985 799999986
No 213
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=8.4e-36 Score=379.01 Aligned_cols=257 Identities=22% Similarity=0.372 Sum_probs=193.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+...+|+.++.+.+++. ..+....+.+..+|+++||++.++.
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 353 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEK-------DEGKRVIERAKGDIEFRNVTFTYPG--------------------------- 353 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcC-------CCCCcCCCCCCCeEEEEEEEEecCC---------------------------
Confidence 345666777777766544331 0011111222346999999998742
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
..+++|+|+|+++++|+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 354 -----~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 425 (582)
T PRK11176 354 -----KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQN 425 (582)
T ss_pred -----CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccC
Confidence 1134999999999999999999999999999999999999998 9999999999877654 4689999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+| +.|++|||.++..- ....+.+.++++.. + .++.++ .|++..||
T Consensus 426 ~~lf-~~Ti~~Ni~~~~~~---~~~~~~i~~al~~~---~------------------------l~~~i~--~lp~Gldt 472 (582)
T PRK11176 426 VHLF-NDTIANNIAYARTE---QYSREQIEEAARMA---Y------------------------AMDFIN--KMDNGLDT 472 (582)
T ss_pred ceee-cchHHHHHhcCCCC---CCCHHHHHHHHHHh---C------------------------cHHHHH--hcccccCc
Confidence 7666 47999999875310 01112222221111 0 111222 36788899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ +.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +..+.||+
T Consensus 473 ~ig~~g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~ 547 (582)
T PRK11176 473 VIGENG-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADE 547 (582)
T ss_pred eeCCCC-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 3455555 45543 67788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|++++.|+++++.+
T Consensus 548 Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 548 ILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred EEEEECCEEEEeCCHHHHHh
Confidence 99999999999999998864
No 214
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.2e-35 Score=328.00 Aligned_cols=198 Identities=31% Similarity=0.454 Sum_probs=165.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999998 999999998875321 23579999999988898999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.+.....+... .+....++++++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987543321100 011234567889999987666544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+||.++|+..++.+.+|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 44566678888899999999999999999
Q ss_pred EEec
Q 000612 404 VYQG 407 (1391)
Q Consensus 404 v~~G 407 (1391)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 215
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=337.63 Aligned_cols=215 Identities=27% Similarity=0.400 Sum_probs=174.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1391)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998765332 357999999863 67778
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++.+..+... ++....++++++.+||++..++.+
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREP----- 138 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----
Confidence 99999988653321100 011234677889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 33455555777777776 59999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 000612 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1391)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~cp 424 (1391)
++++.|+.+++.. .+...|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 217 EILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred EEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 9999999987753 3334454443
No 216
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.7e-35 Score=327.05 Aligned_cols=208 Identities=24% Similarity=0.312 Sum_probs=174.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 46788887763 12368999999999999999999999999999999999875 45899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. .+++.++|++|++.+++..|++|++.+....+ ....++.++.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 14567999999998888899999998865433 123334445678899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999986 46678999999986 564
No 217
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.9e-35 Score=330.80 Aligned_cols=204 Identities=21% Similarity=0.350 Sum_probs=170.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHIGE 240 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~~ 240 (1391)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 4999999999999999999999999999999999999988 999999998875421 13579999999888889
Q ss_pred CCHHHHHHHhhh-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 241 lTVrE~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
+||+||+.++.. ..+.. ..+....++++++.+||++..+..
T Consensus 92 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~---- 133 (240)
T PRK09493 92 LTALENVMFGPLRVRGAS----------------------------------KEEAEKQARELLAKVGLAERAHHY---- 133 (240)
T ss_pred CcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChHHHhcC----
Confidence 999999987542 11100 000112356788899997665544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
++.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.. . +++||.++|+.+++.+++|++++|+
T Consensus 134 -~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 210 (240)
T PRK09493 134 -PSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFID 210 (240)
T ss_pred -hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 356999999999999999999999999999999999999999999998753 3 4556667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (240)
T PRK09493 211 KGRIAEDGDPQVLI 224 (240)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 218
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-35 Score=307.03 Aligned_cols=216 Identities=27% Similarity=0.393 Sum_probs=182.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++.+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|... +..|++.++|.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 45688988874 4679999999999999999999999999999999999876 45799999999876
Q ss_pred c---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000612 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1012 (1391)
+ ....+.-+..||+..+....||+|-+.++..-... .-...+..+.++++|+..++.++.... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 5 34566778999999888788999999987432111 111123344578899999999988765 36799999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1013 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1013 rqRl~iA~~L~~------~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||.+||.|+. ++++||||||||.||...+..++++.|++++.|..|+++.||.+. ...++|+|++|.+ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999985 356999999999999999999999999999999999999999985 6688999999985 89
Q ss_pred EEEecCCC
Q 000612 1087 EIYVGPLG 1094 (1391)
Q Consensus 1087 ~~y~G~~~ 1094 (1391)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999973
No 219
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=343.09 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=180.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999999885210 012359999999999999999999999999999999999876 4589999999765
Q ss_pred Cc-------------------ccccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000612 935 KQ-------------------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN 993 (1391)
Q Consensus 935 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~ 993 (1391)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23457899999986 3444 59999998864321 233444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000612 994 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1072 (1391)
Q Consensus 994 -~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~ 1072 (1391)
+..+.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455544 4579999999999999999999999999999999999999999999999777999999999986 467
Q ss_pred HhcCeEEEEecCcEEEEecCC
Q 000612 1073 EAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1073 ~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
+.+|++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 799999985
No 220
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5e-35 Score=333.21 Aligned_cols=214 Identities=20% Similarity=0.259 Sum_probs=180.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478889988774 2469999999999999999999999999999999999875 4579999999765
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCCcHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCcccc-
Q 000612 935 KQ----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAW-LRLSPEVDSETRKMFIDEVMELVELNPLR- 996 (1391)
Q Consensus 935 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~-lr~~~~~~~~~~~~~v~~~l~~l~L~~~~- 996 (1391)
.. ..+++.++|++|++.+++.+||+||+.+... .. .....+.++++.++++.+++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1345679999999999889999999987542 21 123344556788999999997653
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcC
Q 000612 997 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1076 (1391)
Q Consensus 997 ~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D 1076 (1391)
+.. +..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 443 4679999999999999999999999999999999999999999999999877999999999986 4667899
Q ss_pred eEEEEecCcEEEEecCC
Q 000612 1077 ELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1077 ~~~ll~~gG~~~y~G~~ 1093 (1391)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999986 799999875
No 221
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=313.38 Aligned_cols=212 Identities=25% Similarity=0.382 Sum_probs=177.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+ ..+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5677777665 34689999999999999999999999999999999999876 34899999999876
Q ss_pred cc----cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000612 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+- |.+.++... ..|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~a-----G~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRA-----GTLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCcc-----cCCCh
Confidence 42 3456799999999999999999999988655432 1111222667777763 555555553 46999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||.++|||||+++|++|+|||||.||-|.-.+.|.++|+++.++ |.||+.+-++.. ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999866 779999988765 46788999999985 89999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 218 ~G~~ 221 (237)
T COG0410 218 SGTA 221 (237)
T ss_pred ecCH
Confidence 9996
No 222
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=7.9e-36 Score=385.01 Aligned_cols=256 Identities=22% Similarity=0.339 Sum_probs=191.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.....+|+.+.++.+++. .+. .....+.....|+|+||++.++.
T Consensus 444 ~~~~~~a~~ri~~~l~~~~~~-----~~~-~~~~~~~~~~~I~~~nVsf~Y~~--------------------------- 490 (711)
T TIGR00958 444 MMQAVGASEKVFEYLDRKPNI-----PLT-GTLAPLNLEGLIEFQDVSFSYPN--------------------------- 490 (711)
T ss_pred HHHHHHHHHHHHHHhCCCCCC-----CCC-CCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 567777888888887765431 000 00000112346999999999742
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
+ +++++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 491 ---~-~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 563 (711)
T TIGR00958 491 ---R-PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQE 563 (711)
T ss_pred ---C-CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecC
Confidence 1 1245999999999999999999999999999999999999998 9999999999877654 4689999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.++ +.|+||||.++..- ...+.+.++++. .+ .++.++ .+++..||
T Consensus 564 ~~lF-~gTIreNI~~g~~~----~~~e~i~~al~~---a~------------------------l~~~i~--~lp~GldT 609 (711)
T TIGR00958 564 PVLF-SGSVRENIAYGLTD----TPDEEIMAAAKA---AN------------------------AHDFIM--EFPNGYDT 609 (711)
T ss_pred cccc-ccCHHHHHhcCCCC----CCHHHHHHHHHH---cC------------------------CHHHHH--hCCCccCC
Confidence 7655 57999999986421 111222222111 11 111122 36777899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ ..||||||||++||||++++|+|++||||||+||+.++..|.+ ... ..++|+|+ ++|.. ++.+.+|+
T Consensus 610 ~ige~G-~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~ 682 (711)
T TIGR00958 610 EVGEKG-SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQ 682 (711)
T ss_pred cccCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCE
Confidence 999865 4699999999999999999999999999999999999999988 322 23455554 55554 56678999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++++|+++++.+
T Consensus 683 IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 683 ILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred EEEEECCEEEEeeCHHHHHh
Confidence 99999999999999999865
No 223
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-35 Score=327.05 Aligned_cols=215 Identities=26% Similarity=0.337 Sum_probs=180.3
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCceeEEEEcCccCCCcCc-------cceEEEEcCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-TLKVSGTVTYNGHDMDEFVP-------QRTAAYISQH 234 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1391)
...+++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.|+||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4569999999999999999999999999999999999998 4 33467999999998655442 2579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000612 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1391)
Q Consensus 235 d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1391)
+ .+-|.+||.+.+.-..+...... ..+++..++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 68899999988865543221000 0122344567889999998642
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhc
Q 000612 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1391)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1391)
.+-+.++.+|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.+ ..++.++.|+|+..-+.++|
T Consensus 145 --~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 --RRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred --HHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 244577889999999999999999999999999999999999999999999999876 56778888999999999999
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000612 393 DDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~ 413 (1391)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 224
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=350.13 Aligned_cols=207 Identities=24% Similarity=0.329 Sum_probs=175.4
Q ss_pred cceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000612 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1391)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1391)
...+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 345899999999999999999999999999999999999998 9999999998765432 247999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1391)
+++.+||+||+.|+.+..+... .+...+++++++.+||++..++.
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~- 161 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSY- 161 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcC-
Confidence 9999999999998765432110 00112456789999998766654
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
++.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++||.++|+.+++.+++|+|+
T Consensus 162 ----~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 162 ----PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred ----cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEE
Confidence 45699999999999999999999999999999999999999999999875433 4455668889999999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000612 397 LLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1391)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999998774
No 225
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=338.18 Aligned_cols=215 Identities=26% Similarity=0.381 Sum_probs=181.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++. ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 5889999988741 2359999999999999999999999999999999999875 4589999999876
Q ss_pred Cc-----ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000612 935 KQ-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1391)
Q Consensus 935 ~~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 1008 (1391)
.. ..+++.+||++|++. .....||+|++.+..... ..+.++.++.++++++.++|.+..+.. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 234567999999874 234579999998864322 223444456789999999998877765 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1009 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
|||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999986 46678999999986 799
Q ss_pred EEecCC
Q 000612 1088 IYVGPL 1093 (1391)
Q Consensus 1088 ~y~G~~ 1093 (1391)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999986
No 226
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=331.64 Aligned_cols=214 Identities=27% Similarity=0.376 Sum_probs=180.2
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66788887763 2469999999999999999999999999999999999865 45899999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
.. ..++.++|++|++.+++.+||.||+.+....+. ..+.++.++.++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 234679999999988888999999987643321 122334456688999999998766554 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999985 57788999999985 7999998
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 85
No 227
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.8e-35 Score=333.09 Aligned_cols=204 Identities=25% Similarity=0.375 Sum_probs=169.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-----------CccceEEEEcCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----------VPQRTAAYISQH 234 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 4999999999999999999999999999999999999988 99999999886532 113579999999
Q ss_pred CCCCCCCCHHHHHHHhhhh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 235 DNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
+.+++.+||+||+.++... .+. .. .+....++++++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE--PK--------------------------------EEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC--CH--------------------------------HHHHHHHHHHHHHcCCcchhh
Confidence 8888899999999875321 110 00 011223566788999987665
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
+. ++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+||.++|+..++.+++|
T Consensus 140 ~~-----~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SY-----PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CC-----hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcC
Confidence 44 456999999999999999999999999999999999999999999998753 3 4456667888899999999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000612 394 DIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1391)
++++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 228
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-36 Score=324.56 Aligned_cols=223 Identities=26% Similarity=0.353 Sum_probs=191.2
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1391)
....-++|+|++++.||+..|||=||||||||+++|.++.+|+ +|+|+++|.++...+. ++.+++|+|.-
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 3455789999999999999999999999999999999999998 9999999998866553 36799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.++|..||.||..|+.+.+|.+.. +.+.++.+.|+..||+...+.+
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y 161 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY 161 (386)
T ss_pred ccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC
Confidence 999999999999999998876421 1234567789999999888755
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+++||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++-...+ .+|+.++|+.+|++++.|||
T Consensus 162 -----p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~rI 235 (386)
T COG4175 162 -----PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDRI 235 (386)
T ss_pred -----cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccceE
Confidence 456999999999999999999999999999999999999999998877765444 45556899999999999999
Q ss_pred EEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000612 396 ILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~f~~~G~~cp~~~~~adfl~~v 436 (1391)
.+|.+|+||..|+++|++. .|...-+++|...+
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 9999999999999999974 34444455565543
No 229
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-35 Score=328.57 Aligned_cols=217 Identities=24% Similarity=0.280 Sum_probs=172.2
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++.. .....+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4678888776411 001268999999999999999999999999999999999865 45899999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000612 936 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1391)
Q Consensus 936 ~------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1391)
. ..+++.++|++|++ .+.+.+||+||+.+........ ...+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4567899999998765433211 11111122235788999985 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 46678999999985 7
Q ss_pred EEEEec
Q 000612 1086 QEIYVG 1091 (1391)
Q Consensus 1086 ~~~y~G 1091 (1391)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 230
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-35 Score=325.68 Aligned_cols=192 Identities=28% Similarity=0.376 Sum_probs=160.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCC-CCCCCCH
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDN-HIGEMTV 243 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1391)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 35999999999999999999999999999999999999998 9999999988754333467999999864 3557899
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.++....+ . ....++++++.+||++..++.+ ..
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 999987542210 0 0123566788999987766554 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 44566678888899999999999999997
Q ss_pred E
Q 000612 404 V 404 (1391)
Q Consensus 404 v 404 (1391)
|
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 231
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-35 Score=322.07 Aligned_cols=195 Identities=41% Similarity=0.733 Sum_probs=166.1
Q ss_pred eEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000612 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1391)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1391)
.+.|+||++.++.. +.++.+|+|+|+++++|++++|+|||||||||||++
T Consensus 3 ~~~~~~~~~~~~~~------------------------------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~ 52 (202)
T cd03233 3 TLSWRNISFTTGKG------------------------------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKA 52 (202)
T ss_pred eEEEEccEEEeccC------------------------------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHH
Confidence 47899999998541 133569999999999999999999999999999999
Q ss_pred HhcCCC---CCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHh
Q 000612 198 LAGKLD---PTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKA 272 (1391)
Q Consensus 198 L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~ 272 (1391)
|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++.+..
T Consensus 53 l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~------------------ 111 (202)
T cd03233 53 LANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK------------------ 111 (202)
T ss_pred hcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc------------------
Confidence 999998 66 999999999875432 2467999999998999999999998753210
Q ss_pred cCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCC
Q 000612 273 AGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEIST 352 (1391)
Q Consensus 273 ~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPts 352 (1391)
.+..+..||||||||++||+||+.+|++++|||||+
T Consensus 112 --------------------------------------------~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~ 147 (202)
T cd03233 112 --------------------------------------------GNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTR 147 (202)
T ss_pred --------------------------------------------cccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCc
Confidence 112334699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000612 353 GLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1391)
Q Consensus 353 gLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1391)
|||+.++..+.+.|+++.+..+.++|+++||+.+++.+.+|++++|++|++++.|
T Consensus 148 ~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 148 GLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999998765335677777788888999999999999999998765
No 232
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.3e-35 Score=325.36 Aligned_cols=206 Identities=24% Similarity=0.344 Sum_probs=173.0
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4677777663 2469999999999999999999999999999999999865 458999999987532
Q ss_pred -----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 937 -----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 937 -----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
..+++.++|++|++.+++.+|+.|++.+...... ....++.++.++++++.+++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHH
Confidence 2345679999999988888999999987642111 123334455688899999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999986 44
No 233
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9.9e-36 Score=312.96 Aligned_cols=202 Identities=24% Similarity=0.391 Sum_probs=185.0
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcH
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
+.+.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.++. .+.++||.|.+.-++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccCcH
Confidence 45789999999999999999999999999999999999886 5689999999988754 34578999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
.|.|.|-|.++. ++.++.++.++..|+.+++....... ++.||.|++|++.+-.+++++|++++||||+|||
T Consensus 90 ~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999999998874 56677777889999999999887776 4689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||.+.+.+.+.+.++.+.|.|||+++|++. .+-++||++++|++ |+.|.+|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999986 68899999999986 799999986
No 234
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.1e-35 Score=326.96 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=164.2
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCC--CCCcH
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTI 958 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 958 (1391)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 468999999999999999999999999999999999865 45899999997653 3456799999997653 34799
Q ss_pred HHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000612 959 YESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1391)
Q Consensus 959 ~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsg 1037 (1391)
.||+.+....... .....+..++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223345688999999998776665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1038 LD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999986 47788999999974 4 66654
No 235
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.2e-35 Score=330.53 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=177.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcCc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1391)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235899999999999999999999999999999999986521 12799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000612 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGLP 1003 (1391)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 1003 (1391)
+... ...++.++|++|++.+++ .|++||+.+....+. ..+.++.++.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999988654331 122344456688999999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999876 589999999986 57788999999986
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 799999875
No 236
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-35 Score=325.06 Aligned_cols=196 Identities=30% Similarity=0.452 Sum_probs=165.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1391)
.+|+|+|+++++| +++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 4999999999999 99999999999999999999999998 999999998875432 24679999999988999999
Q ss_pred HHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000612 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1391)
Q Consensus 244 rE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1391)
+||+.+.....+... .+....++++++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 999987654321100 001123567888999987666554 45
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000612 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1391)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~i 403 (1391)
|||||||||+||++|+.+|++++|||||+|||..++.++.+.|+++.. + ++|+.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5566688898999999999999999999
Q ss_pred EEec
Q 000612 404 VYQG 407 (1391)
Q Consensus 404 v~~G 407 (1391)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 237
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.5e-35 Score=346.58 Aligned_cols=208 Identities=25% Similarity=0.296 Sum_probs=175.5
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCc----cCCCcCc-------cceEEEE
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH----DMDEFVP-------QRTAAYI 231 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1391)
....+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333221 1469999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000612 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1391)
Q Consensus 232 ~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1391)
+|++.+++.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999998864432110 0112346778999999877
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhh
Q 000612 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1391)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1391)
.|..+ ..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+. .+.+|+.++|+..++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~-~~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK-LNKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHh
Confidence 66554 459999999999999999999999999999999999999999999987543 345566688999999999
Q ss_pred cCeEEEEcCCeEEEecChhHHH
Q 000612 392 FDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 238
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.2e-35 Score=327.70 Aligned_cols=212 Identities=26% Similarity=0.380 Sum_probs=176.8
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45678877663 2469999999999999999999999999999999999865 45899999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 QE--TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~~--~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
.. ...+.++|++|++.+++.+|++|++.+.+..+ ....+...+.++++++.++|.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22357999999988888899999998765432 1223334456788999999987766653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 58999999999863 4 45999999985 78999887
Q ss_pred C
Q 000612 1093 L 1093 (1391)
Q Consensus 1093 ~ 1093 (1391)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 239
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=338.56 Aligned_cols=217 Identities=22% Similarity=0.326 Sum_probs=179.5
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67889988885211 011359999999999999999999999999999999999875 45799999998763
Q ss_pred c-------ccccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000612 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1391)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1391)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++.+++++++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 13466899999986 3444 59999999865322 233445566788999999996 566654 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 67999999999999999999999999999999999999999999999975 4899999999986 47788999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799999985
No 240
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=337.11 Aligned_cols=206 Identities=26% Similarity=0.356 Sum_probs=170.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC--c---CccceEEEEcCCCC-CCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1391)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 4999999999999999999999999999999999999998 9999999998741 1 12357999999863 345
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
..||+||+.++....+... .+....++++++.+||.+..++.
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~---- 138 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKP---- 138 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCC----
Confidence 6899999988653221100 01122467788999998766654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+.+++.+.||++++|+
T Consensus 139 -~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 139 -THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999876532 4456667888999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000612 400 DGQIVYQGPRELVLE 414 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1391)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988753
No 241
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.5e-35 Score=327.15 Aligned_cols=202 Identities=33% Similarity=0.522 Sum_probs=163.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1391)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 569999999999999999999999999999999999998 76 999999998875433456799999999899999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHH-HHHHcCCcccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~ 320 (1391)
||+||+.|+.......... .. .....++. .++.+++++..++ .
T Consensus 97 tv~enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 140 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGN-----L 140 (226)
T ss_pred cHHHHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhcc-----c
Confidence 9999999875432110000 00 00011233 6788888765554 4
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCc-hhHHhhcCeEEEEc
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPA-PETYDLFDDIILLS 399 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~-~~~~~~~D~iilL~ 399 (1391)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|+ ++|+. .++.+.+|++++|+
T Consensus 141 ~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVIL-TIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEE-EecCCCHHHHHhCCEEEEEe
Confidence 456999999999999999999999999999999999999999999998754 3455555 55554 68999999999999
Q ss_pred CCeEEEec
Q 000612 400 DGQIVYQG 407 (1391)
Q Consensus 400 ~G~iv~~G 407 (1391)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 242
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.9e-35 Score=324.58 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=176.7
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4567766553 2468999999999999999999999999999999999865 468999999987643
Q ss_pred ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000612 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1391)
Q Consensus 937 ~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl 1016 (1391)
.. .+.++|++|++.+++.+|++|++.+....+. .+ ++.+.++++.+++.+..+.. +..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHH
Confidence 22 2579999999988888999999987654332 11 23477899999998877665 357999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCCC
Q 000612 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1017 ~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~~ 1094 (1391)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999986 47788999999985 7999999874
No 243
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=331.50 Aligned_cols=206 Identities=21% Similarity=0.288 Sum_probs=176.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999998874 2358999999999999999999999999999999999865 4589999998764
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
. ..++.++|++|++.+++.+||+|++.+.. . . ..++.++++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~--~---~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGL--K---G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhcc--c---c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 24567999999998888899999998742 1 0 1234578899999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 46788999999985 789988875
No 244
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=330.60 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=166.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE 245 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+|
T Consensus 15 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHH
Confidence 4999999999999999999999999999999999999998 99999999887542 345899999988888999999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.++.+..+... .+....++++++.+||++..++. +..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS 130 (255)
T PRK11248 90 NVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRY-----IWQLS 130 (255)
T ss_pred HHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCC-----hhhCC
Confidence 9987643221100 00112456788999998766544 44699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc--CCeE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQI 403 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~--~G~i 403 (1391)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++||.++|+..++.+++|+|++|+ +|++
T Consensus 131 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 999999999999999999999999999999999999999999875433 4456667888999999999999998 5999
Q ss_pred EEecChh
Q 000612 404 VYQGPRE 410 (1391)
Q Consensus 404 v~~G~~~ 410 (1391)
+..++.+
T Consensus 210 ~~~~~~~ 216 (255)
T PRK11248 210 VERLPLN 216 (255)
T ss_pred EEEecCC
Confidence 9988654
No 245
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.4e-35 Score=324.75 Aligned_cols=193 Identities=26% Similarity=0.380 Sum_probs=163.0
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCC-CCCCC
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 956 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 956 (1391)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999865 458999999986542 234567999999974 35678
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000612 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1391)
Q Consensus 957 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTs 1036 (1391)
|++|++.+....+ .......++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 122333445678899999998766665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1037 gLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
|||+.++..+++.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 566779999999864
No 246
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=314.62 Aligned_cols=206 Identities=27% Similarity=0.381 Sum_probs=179.4
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 954 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 954 (1391)
+...+++|||+++++||++||+||||||||||+|+|+|... +..|+|.++|.++.... .+..++--+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 55789999999999999999999999999999999999876 46899999999875422 2345788899999999
Q ss_pred CCcHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000612 955 FVTIYESLLFSAWLRL--------SPE-VDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1025 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~ 1025 (1391)
.+||.||+..++..+. +.. ...++..++..++|+.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998755331 111 1234455678899999999999998854 6999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1026 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1026 p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|++|+||||.+||.+.....+.+.|+++.+. |.||+++-|+.+. ++.+||||++|+. |+++..|++
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P 234 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTP 234 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCH
Confidence 9999999999999999999999999999874 7999999999985 8999999999986 799999997
No 247
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=331.35 Aligned_cols=194 Identities=22% Similarity=0.307 Sum_probs=164.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE 245 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 4999999999999999999999999999999999999998 9999999976543 2457999999988888899999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.++... . ....++++++.+||.+..+.. +..||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~-----~~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEW-----PAALS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCC-----hhhCC
Confidence 99874210 0 001245678889998765544 45699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1391)
|||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+.. +.+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999875433 4455667888889999999999999999999
Q ss_pred ecChh
Q 000612 406 QGPRE 410 (1391)
Q Consensus 406 ~G~~~ 410 (1391)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 248
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=341.41 Aligned_cols=214 Identities=21% Similarity=0.240 Sum_probs=173.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCcCc-------cceEEEEcCCC-
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD- 235 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1391)
..+|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999987421 128999999998765432 13699999987
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 236 -~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
.+.+.+||.+++....+... +. ...+....++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~-~~--------------------------------~~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ-GG--------------------------------NKKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc-CC--------------------------------CHHHHHHHHHHHHHHCCCCChHH-
Confidence 47899999999876543210 00 00112235677899999974211
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
+-++.++.|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 123456679999999999999999999999999999999999999999999998653 345667789999999999999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999988753
No 249
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.5e-35 Score=326.56 Aligned_cols=201 Identities=27% Similarity=0.364 Sum_probs=162.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCC--CC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--NH 237 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999998 999999999876543 235799999987 46
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1391)
++.+||+||+.+.....+.....+ ......+++++.+||. ...+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKKE--------------------------------ARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHHH--------------------------------HHHHHHHHHHHHCCCChhHhhCC-
Confidence 678999999988654321100000 0011124567888885 344443
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++||.++|+..++.+.+|+++
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQE-ELGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEE
Confidence 456999999999999999999999999999999999999999999998764 324455667888888989999999
Q ss_pred EEcCCeEEEec
Q 000612 397 LLSDGQIVYQG 407 (1391)
Q Consensus 397 lL~~G~iv~~G 407 (1391)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 250
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=7.3e-35 Score=324.53 Aligned_cols=211 Identities=25% Similarity=0.323 Sum_probs=172.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++.. ...+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4677887776421 012469999999999999999999999999999999999865 45899999998754
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000612 936 QE---T---FA-RISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1391)
Q Consensus 936 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 1008 (1391)
.. . ++ +.++|++|++.+++.+|++|++.+....+. ....+..+.+.++++.+++.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 31 1 22 569999999988888999999988654331 22233345678899999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1009 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55899999986 565
Q ss_pred E
Q 000612 1088 I 1088 (1391)
Q Consensus 1088 ~ 1088 (1391)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 251
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=336.59 Aligned_cols=216 Identities=24% Similarity=0.312 Sum_probs=181.8
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37889998887421 12358999999999999999999999999999999999875 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.+||++|++. .++..||+|++.|..... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999973 567789999998864322 2344455567899999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999986 34 67999999985 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 252
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=329.15 Aligned_cols=212 Identities=22% Similarity=0.335 Sum_probs=177.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 377889988763 2369999999999999999999999999999999999865 4589999999875
Q ss_pred Ccc----cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000612 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lS 1009 (1391)
... ..++.++|++|+..+++.+||.|++.+..... ..+..++.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 23467999999998888899999998754211 1122334567777877 466555543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 57889999999986 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9986
No 253
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.8e-35 Score=340.20 Aligned_cols=229 Identities=21% Similarity=0.233 Sum_probs=184.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|++.+++............+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 47889998877532110000000123569999999999999999999999999999999999876 3589999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000612 935 KQE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1391)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1391)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.+.++++.++|. +..+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2456799999997 57889999999988644321 1234555667788999999994 344544 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
..||||||||++||+||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|++
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 689999999999999999999999999999999999999999999999764 999999999986 46678999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 254
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=328.69 Aligned_cols=216 Identities=24% Similarity=0.280 Sum_probs=178.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcCc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1391)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887763 235899999999999999999999999999999999986421 35899999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCC
Q 000612 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGLPGV 1005 (1391)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~ 1005 (1391)
++.. ..+++.+||++|++.+++.+||.||+.+....+... ....+.++.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLV-KSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhcccc-CCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7642 234567999999998888999999998865432111 1223344568899999998642 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999864 899999999986 47788999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99999885
No 255
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=9.2e-35 Score=330.14 Aligned_cols=214 Identities=22% Similarity=0.303 Sum_probs=179.7
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35778887763 2368999999999999999999999999999999999875 45899999997653
Q ss_pred c----------------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000612 936 Q----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL 999 (1391)
Q Consensus 936 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 999 (1391)
. ...++.++|++|++.+++..|+.||+.+..... .....+..++.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999998888999999998753211 1123344456688999999998776665
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeE
Q 000612 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1391)
Q Consensus 1000 vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~ 1078 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999986 477889999
Q ss_pred EEEecCcEEEEecCC
Q 000612 1079 FLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1079 ~ll~~gG~~~y~G~~ 1093 (1391)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999875
No 256
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=339.79 Aligned_cols=208 Identities=20% Similarity=0.256 Sum_probs=174.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1391)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999987 9999999998765432 35799999987 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1391)
+.+.+||.+++.+..+...... ..+...++.++++.+||+. ..++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcC-
Confidence 8899999999987543321000 0011234678899999963 4454
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
.++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+ ..+++++.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~-~~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQ-ELGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEE
Confidence 4557999999999999999999999999999999999999999999998765 33556777899999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000612 396 ILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1391)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 257
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=334.72 Aligned_cols=213 Identities=23% Similarity=0.320 Sum_probs=178.7
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ +++.+|+|||++|++||++||+|+|||||||||++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 46778877763 12358999999999999999999999999999999999865 45899999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 936 Q----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ~----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
. ...++.+||++|++. .+...|+.||+.+..... ..+.++.++.++++++.++|.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCH
Confidence 2 234567999999975 356689999998865332 223444456788999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 35 66999999986 799999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 258
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.9e-35 Score=324.72 Aligned_cols=196 Identities=24% Similarity=0.361 Sum_probs=160.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1391)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999998 9999999988755432 1469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
++.+||+||+.+......... .+....++++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988643211100 001123566888999986655544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+..+ .+|+.++|+..++. .+|++++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHh-hcCEEEE
Confidence 46999999999999999999999999999999999999999999998764334 44555677777765 5799999
Q ss_pred EcCCeEE
Q 000612 398 LSDGQIV 404 (1391)
Q Consensus 398 L~~G~iv 404 (1391)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 259
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=331.09 Aligned_cols=217 Identities=22% Similarity=0.269 Sum_probs=179.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 377889888763 2469999999999999999999999999999999999865 4689999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC----------CCC--CHHHHHHHHHHHHHHcCCcccccc
Q 000612 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLS----------PEV--DSETRKMFIDEVMELVELNPLRQS 998 (1391)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~----------~~~--~~~~~~~~v~~~l~~l~L~~~~~~ 998 (1391)
... . .+..++|++|++.+++.+||+||+.+....... ... ...+..+.+++.++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999986431100 000 111233567888999999877666
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCe
Q 000612 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1391)
Q Consensus 999 ~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~ 1077 (1391)
. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999775 899999999986 57788999
Q ss_pred EEEEecCcEEEEecCC
Q 000612 1078 LFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1078 ~~ll~~gG~~~y~G~~ 1093 (1391)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 799999986
No 260
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.5e-35 Score=326.91 Aligned_cols=201 Identities=26% Similarity=0.358 Sum_probs=165.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 14 HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 5999999999999999999999999999999999999998 9999999988754332 35699999999889999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-Ccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDEM 320 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~~ 320 (1391)
||+||+.++....+.. . ....+++++.++ +.+..++ .
T Consensus 91 tv~~~l~~~~~~~~~~-~------------------------------------~~~~~~~l~~~~~l~~~~~~-----~ 128 (230)
T TIGR03410 91 TVEENLLTGLAALPRR-S------------------------------------RKIPDEIYELFPVLKEMLGR-----R 128 (230)
T ss_pred cHHHHHHHHHHhcCcc-h------------------------------------HHHHHHHHHHHHhHHHHhhC-----C
Confidence 9999998865322100 0 001234455554 4443343 3
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+ ..+++|+.++|+.+++.+++|++++|++
T Consensus 129 ~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 129 GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRA-EGGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-cCCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 456999999999999999999999999999999999999999999998754 2345566678888999999999999999
Q ss_pred CeEEEecChhHH
Q 000612 401 GQIVYQGPRELV 412 (1391)
Q Consensus 401 G~iv~~G~~~~~ 412 (1391)
|++++.|+.+++
T Consensus 208 g~i~~~~~~~~~ 219 (230)
T TIGR03410 208 GRVVASGAGDEL 219 (230)
T ss_pred CEEEEECCHHHc
Confidence 999999998876
No 261
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-35 Score=335.89 Aligned_cols=219 Identities=24% Similarity=0.297 Sum_probs=179.6
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++... ...+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367788888774210 001358999999999999999999999999999999999876 4689999999875
Q ss_pred Cc-------ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000612 935 KQ-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1391)
Q Consensus 935 ~~-------~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1391)
.. ...++.+||++|++. .+..+||.|++.|..... ....++..++++++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----P 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----c
Confidence 32 123467999999963 233579999998765332 223445556788999999996 566665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 57789999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 99999885
No 262
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=328.63 Aligned_cols=205 Identities=19% Similarity=0.344 Sum_probs=169.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.+
T Consensus 17 ~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 17 RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 4999999999999999999999999999999999999988 9999999988754332 35699999998889999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.+..+.... .. ..+....++++++.+||++..+.. .
T Consensus 94 tv~enl~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~ 135 (241)
T PRK10895 94 SVYDNLMAVLQIRDD-LS--------------------------------AEQREDRANELMEEFHIEHLRDSM-----G 135 (241)
T ss_pred cHHHHHhhhhhcccc-cC--------------------------------HHHHHHHHHHHHHHcCCHHHhhcc-----h
Confidence 999999875432110 00 001122456788899997655543 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.. .+ .+|+.++|+..++.+.+|++++|++|
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiii~sH~~~~~~~~~d~v~~l~~G 213 (241)
T PRK10895 136 QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SG-LGVLITDHNVRETLAVCERAYIVSQG 213 (241)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEEcCHHHHHHhcCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999988653 34 45555778888999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+++++.
T Consensus 214 ~i~~~~~~~~~~ 225 (241)
T PRK10895 214 HLIAHGTPTEIL 225 (241)
T ss_pred eEEeeCCHHHHh
Confidence 999999988764
No 263
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=327.83 Aligned_cols=213 Identities=23% Similarity=0.316 Sum_probs=178.9
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67788887763 2359999999999999999999999999999999999875 45899999998642
Q ss_pred ---------cccccceEEEeccCCCCCCCCcHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 936 ---------QETFARISGYCEQNDIHSPFVTIYESLLFS-AWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 936 ---------~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~-a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
....++.++|++|++.+++.+||.|++.+. .... .....+..+.+.++++.+|+.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 012346799999999999999999999753 2221 122333445688899999998777765 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 46778999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99999875
No 264
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.2e-34 Score=327.62 Aligned_cols=218 Identities=22% Similarity=0.252 Sum_probs=175.4
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5678877763 246899999999999999999999999999999999974112468999999987543
Q ss_pred c---cc-cceEEEeccCCCCCCCCcHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCC
Q 000612 937 E---TF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP----EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSG 1007 (1391)
Q Consensus 937 ~---~~-~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~ 1007 (1391)
. .. +..++|++|++.+++.+|++|++.+........ ..+.++..+.++++++.++|. +..+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 12 234899999999999999999998764322110 112233345688999999997 45554421 24
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-cCeEEEEecCcE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGQ 1086 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~-~D~~~ll~~gG~ 1086 (1391)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+... +|++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877899999999986 46566 799999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 9999875
No 265
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.3e-35 Score=326.83 Aligned_cols=233 Identities=25% Similarity=0.324 Sum_probs=181.2
Q ss_pred EEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHH
Q 000612 119 VRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLAL 198 (1391)
Q Consensus 119 v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L 198 (1391)
|+.+|++.++....+ -+++.|.+.+.+ ..+...+++|+|+|+++++|++++|+|||||||||||++|
T Consensus 1 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i 67 (236)
T cd03267 1 IEVSNLSKSYRVYSK---EPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKIL 67 (236)
T ss_pred CceecchhhccCcCC---ccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 356788888865322 233334333332 1233446799999999999999999999999999999999
Q ss_pred hcCCCCCCCceeEEEEcCccCCCc--CccceEEEEc-CCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCC
Q 000612 199 AGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYIS-QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1391)
Q Consensus 199 ~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1391)
+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 68 ~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~----------------- 127 (236)
T cd03267 68 SGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP----------------- 127 (236)
T ss_pred hCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH-----------------
Confidence 9999998 99999999875332 1235799997 55667789999999988654322100
Q ss_pred CCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCC
Q 000612 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1391)
Q Consensus 276 ~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD 355 (1391)
++....++++++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||
T Consensus 128 -----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 128 -----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred -----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 0011235667888999888777654 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000612 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1391)
Q Consensus 356 ~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1391)
+.++..+.+.|+++.+ .++.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNR-ERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998764 33445666788888999999999999999998765
No 266
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=333.66 Aligned_cols=214 Identities=25% Similarity=0.366 Sum_probs=180.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++. +..+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 677888887741 1348999999999999999999999999999999999865 46899999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 936 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
. ...++.+||++|++. .+...||.|++.+..... ..+.+..++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999963 334579999998765322 2334444567889999999988777663 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999986 57789999999986 799999
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 986
No 267
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=328.97 Aligned_cols=221 Identities=24% Similarity=0.249 Sum_probs=178.6
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 377889988774 235899999999999999999999999999999999986532 2589999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....+..++.++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 148 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLND-YPS 148 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhcc-Chh
Confidence 8763 123456799999999998999999999886543211 112333445678899999885321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~ 225 (253)
T PRK14267 149 NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 226 i~~~~~~ 232 (253)
T PRK14267 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9999885
No 268
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=333.66 Aligned_cols=204 Identities=26% Similarity=0.377 Sum_probs=167.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCCCC-CCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 23 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (271)
T PRK13632 23 NALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGA 99 (271)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcc
Confidence 4899999999999999999999999999999999999998 999999999875432 2457999999863 67789
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++....+... ++....++++++.+||++..++.+
T Consensus 100 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (271)
T PRK13632 100 TVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP----- 140 (271)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc-----
Confidence 99999988643211100 011224577889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.. .++++|+.++|+..++. .+|++++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~G 218 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSEG 218 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 33345555666767764 79999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (271)
T PRK13632 219 KLIAQGKPKEIL 230 (271)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 269
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-35 Score=336.12 Aligned_cols=205 Identities=24% Similarity=0.355 Sum_probs=169.0
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCCC-
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1391)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35999999999999999999999999999999999999998 99999999887432 11356999999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1391)
.+..+||+||+.|+....+... ++....++++++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999988653221100 01122456788999996 445544
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+.||++
T Consensus 143 -----~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -----PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998743 3 556666889999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 270
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=9.5e-35 Score=330.01 Aligned_cols=205 Identities=22% Similarity=0.318 Sum_probs=170.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC----------------ccceEE
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----------------PQRTAA 229 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~~ 229 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4999999999999999999999999999999999999998 999999998775321 145799
Q ss_pred EEcCCCCCCCCCCHHHHHHHhhhh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCC
Q 000612 230 YISQHDNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1391)
Q Consensus 230 yv~Q~d~~~~~lTVrE~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1391)
|++|++.+++.+||+||+.++... .+.. ..+....++++++.+|+
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------------------------------RAEAEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCC
Confidence 999998889999999999875321 1100 00011235677889999
Q ss_pred cccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhH
Q 000612 309 DVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1391)
Q Consensus 309 ~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~ 388 (1391)
++..+.. ++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ ..+++++.++|+.+++
T Consensus 137 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~~ 210 (252)
T TIGR03005 137 ADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLAS-EHDLTMLLVTHEMGFA 210 (252)
T ss_pred hhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHH
Confidence 7665543 456999999999999999999999999999999999999999999998764 3345666688888999
Q ss_pred HhhcCeEEEEcCCeEEEecChhHHH
Q 000612 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988763
No 271
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=327.65 Aligned_cols=202 Identities=25% Similarity=0.381 Sum_probs=165.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 35699999998889989
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCcccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1391)
||+||+.++..... . + + ....++.+++.+ ++.+..++ .
T Consensus 96 tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~-----~ 134 (237)
T PRK11614 96 TVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQ-----R 134 (237)
T ss_pred cHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhC-----c
Confidence 99999987542110 0 0 0 001123445555 35443343 3
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ .+||.++|+..++.+.+|++++|++
T Consensus 135 ~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 135 AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QG-MTIFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCcHHHHHhhCCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998754 34 4455578888999999999999999
Q ss_pred CeEEEecChhHHH
Q 000612 401 GQIVYQGPRELVL 413 (1391)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1391)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999998774
No 272
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.6e-35 Score=323.24 Aligned_cols=194 Identities=27% Similarity=0.402 Sum_probs=162.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 15 ~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 15 AALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 5999999999999999999999999999999999999988 999999998875432 2357999999998999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.+.....+.. . .+....++++++.+||++..++.+
T Consensus 92 ~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (214)
T cd03292 92 DRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP--- 134 (214)
T ss_pred CCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh---
Confidence 999999998865432110 0 001123567888999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|++++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l~ 210 (214)
T cd03292 135 --AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIALE 210 (214)
T ss_pred --hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998753 3 4456667888889999999999999
Q ss_pred CCeE
Q 000612 400 DGQI 403 (1391)
Q Consensus 400 ~G~i 403 (1391)
+|++
T Consensus 211 ~G~~ 214 (214)
T cd03292 211 RGKL 214 (214)
T ss_pred CCcC
Confidence 9974
No 273
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=328.82 Aligned_cols=215 Identities=21% Similarity=0.239 Sum_probs=176.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988774 135899999999999999999999999999999999976531 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1002 (1391)
.++.. ...++.++|++|++..++ .||+||+.+....... ......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999987774 8999999886533211 12233455678889998874 233433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999996 4799999999986 4778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 799999885
No 274
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=333.90 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=169.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC----ccceEEEEcCCCC-CCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 239 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1391)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999998 999999999875422 2467999999863 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
..||.||+.|+....+... .+....++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998753322100 011234677899999987777655
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 469999999999999999999999999999999999999999999987543 34455556777778765 99999999
Q ss_pred CCeEEEecChhHHHH
Q 000612 400 DGQIVYQGPRELVLE 414 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1391)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 275
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.3e-35 Score=322.43 Aligned_cols=193 Identities=30% Similarity=0.425 Sum_probs=161.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 16 AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 4999999999999999999999999999999999999988 999999999876532 1357999999988888
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++....+... ......++++++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP--- 135 (214)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999988654321100 001124567888999986555544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~ 211 (214)
T TIGR02673 136 --EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIILD 211 (214)
T ss_pred --hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEec
Confidence 46999999999999999999999999999999999999999999998753 3 4456667888899999999999999
Q ss_pred CCe
Q 000612 400 DGQ 402 (1391)
Q Consensus 400 ~G~ 402 (1391)
+|+
T Consensus 212 ~G~ 214 (214)
T TIGR02673 212 DGR 214 (214)
T ss_pred CCC
Confidence 985
No 276
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-35 Score=342.01 Aligned_cols=212 Identities=27% Similarity=0.424 Sum_probs=179.0
Q ss_pred CCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcC
Q 000612 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1391)
.+..++|+||++++. +++.+|+++||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999986 23459999999999999999999999999999999998764 589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccc
Q 000612 932 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-------LRQSLVG 1001 (1391)
Q Consensus 932 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg 1001 (1391)
.++++ +.+|+.+||||||..++. -||.+|+.|+. ++.+.+ +|-++.+..++.+ -.++.||
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98754 568889999999887765 59999999862 334433 3555666666654 3456677
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEE
Q 000612 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1391)
Q Consensus 1002 ~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll 1081 (1391)
..| ..|||||||||+|||+++.+|+|+++|||||.||..+...+++.+.+. ..|+|+|++.|+. ++.+.||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 765 579999999999999999999999999999999999999999999994 3589999999986 467899999999
Q ss_pred ecCcEEEEecCC
Q 000612 1082 KRGGQEIYVGPL 1093 (1391)
Q Consensus 1082 ~~gG~~~y~G~~ 1093 (1391)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 789999986
No 277
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-34 Score=327.62 Aligned_cols=206 Identities=24% Similarity=0.390 Sum_probs=168.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 4899999999999999999999999999999999999863 12379999999987542 1235799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1391)
+ +||+||+.+..+..+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999886543210000 00112356778899997 44443
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++.+++|+
T Consensus 141 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 -----SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3456999999999999999999999999999999999999999999998753 3 4566688888999999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000612 395 IILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1391)
+++|++|++++.|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 278
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=328.79 Aligned_cols=214 Identities=24% Similarity=0.288 Sum_probs=177.0
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+.. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899988763 235899999999999999999999999999999999976421 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ..+++.++|++|++.+++ .|++||+.+....+ ..+.+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 134567999999988777 89999999865432 1233344456888999998843 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 899999999986 4678899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 279
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.4e-33 Score=360.83 Aligned_cols=209 Identities=28% Similarity=0.368 Sum_probs=178.4
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++++||+|+++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46999999999852 12468999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 1003 (1391)
+++ ..+++.+|||+|++.+++ -|++||+.++. + .++ +.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 457788999999998876 59999998741 1 222 3467888888887543 5666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999886 589999999985 4678999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 280
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=329.47 Aligned_cols=205 Identities=33% Similarity=0.507 Sum_probs=169.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 16 TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 4999999999999999999999999999999999999988 9999999987654332 356999999988878899
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.++....+. .. ++....++++++.+||++..++.+ .
T Consensus 93 v~e~l~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 133 (258)
T PRK13548 93 VEEVVAMGRAPHGL--SR--------------------------------AEDDALVAAALAQVDLAHLAGRDY-----P 133 (258)
T ss_pred HHHHHHhhhcccCC--Cc--------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----c
Confidence 99999875422110 00 001123567788999987666554 4
Q ss_pred cCChhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 323 GISGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~------~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
.|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+.. +.+||.++|+..++.+++|+|+
T Consensus 134 ~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~ 212 (258)
T PRK13548 134 QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRIV 212 (258)
T ss_pred cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEEE
Confidence 69999999999999999 5999999999999999999999999999876333 4456667888899999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000612 397 LLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1391)
+|++|++++.|+.+++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 213 LLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999987764
No 281
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=329.56 Aligned_cols=213 Identities=25% Similarity=0.358 Sum_probs=178.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788887764 2469999999999999999999999999999999999865 45899999998653
Q ss_pred c---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000612 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1012 (1391)
. ...++.++|++|++.+++.+||+|++.+..... ....+..++.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223457999999988878899999998754221 1112233456788999999987777653 5799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1013 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1013 rqRl~iA~~L~------~~p~illLDEPTsgLD~~s~~~i~~~l~~~~-~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. ++|.|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 66999999999986 47778999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 89998885
No 282
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=332.59 Aligned_cols=205 Identities=25% Similarity=0.362 Sum_probs=170.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1391)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 3999999999999999999999999999999999999998 9999999988754322 356899999863 34568
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++....+.. .++....++++++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998765332110 0011224577899999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+.+++.+.+|++++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPE-TYGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998765 33455666888889999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 283
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-34 Score=326.40 Aligned_cols=215 Identities=25% Similarity=0.315 Sum_probs=178.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56788877663 2469999999999999999999999999999999999865 45799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P---EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..++.++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 31 1234699999999999999999999885432100 0 011233445688999999998776665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999875 799999999986 57788999999986 78
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9998875
No 284
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-34 Score=321.01 Aligned_cols=194 Identities=25% Similarity=0.345 Sum_probs=164.1
Q ss_pred ccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCcHHHHHHH
Q 000612 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYESLLF 964 (1391)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f 964 (1391)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999875 4589999999876431 234679999999988889999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000612 965 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1391)
Q Consensus 965 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~ 1044 (1391)
....+. .. .+..++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 533211 11 123345688999999998877765 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1045 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1045 ~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
.+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4899999999986 46788999999985 7877654
No 285
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.57 Aligned_cols=203 Identities=27% Similarity=0.399 Sum_probs=168.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCC-CCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDN-HIGE 240 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 240 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+..
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4999999999999999999999999999999999999998 9999999998754322 356999999864 4677
Q ss_pred CCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000612 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 241 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1391)
.||+||+.|+....+... .+....++++++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 899999988653321100 011224567888999987766554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 3 45556677888887 56999999999
Q ss_pred CeEEEecChhHHH
Q 000612 401 GQIVYQGPRELVL 413 (1391)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1391)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 286
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=333.38 Aligned_cols=215 Identities=26% Similarity=0.299 Sum_probs=180.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|+++.++. ..+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3788999887741 12358999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 566789999998865432 1234444567899999999988877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + +.+|++++|++ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 8999999999863 4 46999999985 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 287
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=328.29 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=164.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 48999999999999999999999999999999999998620 1289999999876421 1245799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1391)
.+||+||+.|+....+.... .+....++..++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 49999999986533211000 00112345567777763 33344
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.++.|||||||||+|||+|+.+|++|+|||||+|||..++..+.+.|+++. .+ ++||.++|+..++.+++|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 345699999999999999999999999999999999999999999999874 33 4566688888999999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000612 395 IILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1391)
+++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998774
No 288
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.72 Aligned_cols=204 Identities=23% Similarity=0.317 Sum_probs=167.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCCCC-CCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999998 999999998875432 2357999999874 68888
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
|+++|+.|.....+... .+....++.+++.+|+.+..++. +
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYE-----P 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----c
Confidence 99999988653321100 00112356778899998766654 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998754 324445556777777765 9999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 289
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-35 Score=295.58 Aligned_cols=205 Identities=26% Similarity=0.385 Sum_probs=175.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVr 244 (1391)
..+|+|+|+.|.+||.++++||||||||||||+++|+.+|. .|+|.+||.+++.- ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999998 99999999987643 33458999999999999999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
+|++|+.++.|.+.. .+ ..++.+.+...||++..+..+ -+|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~i-----~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKYI-----WQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccce-----Eee
Confidence 999999999886432 11 234567788999988766544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC--Ce
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD--GQ 402 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~--G~ 402 (1391)
||||||||.|||||..+|+.|+||||+++||.-|+.++.+.|-++.+..++ -++.++|+.+|+.-++++++||+. |+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999998887765544 455589999999999999999984 79
Q ss_pred EEEecChhHHHH
Q 000612 403 IVYQGPRELVLE 414 (1391)
Q Consensus 403 iv~~G~~~~~~~ 414 (1391)
|+..=+.+-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998777664433
No 290
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-34 Score=325.68 Aligned_cols=211 Identities=23% Similarity=0.342 Sum_probs=171.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 16 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 16 KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754332 24699999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++..... ..+...... ...+....++++++.+|+++..++.+
T Consensus 93 tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (242)
T TIGR03411 93 TVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLA----- 141 (242)
T ss_pred CHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988643110 000000000 00011234677899999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ + .+||.++|+..++.++||+|++|++|
T Consensus 142 ~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 142 GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998743 3 45666788889999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
+++++|+.+++.
T Consensus 219 ~~~~~~~~~~~~ 230 (242)
T TIGR03411 219 SVLAEGSLDQVQ 230 (242)
T ss_pred eEEeeCCHHHHh
Confidence 999999987753
No 291
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=315.92 Aligned_cols=196 Identities=30% Similarity=0.581 Sum_probs=164.0
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEEEEEEcCcc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1391)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58899999999743 13457999999999999999999999999999999999986532 568999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 934 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
... ...++.++|++|++.+++.+||+|++.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777776654467889999999986 788876
Q ss_pred c
Q 000612 1091 G 1091 (1391)
Q Consensus 1091 G 1091 (1391)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 292
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=329.20 Aligned_cols=216 Identities=25% Similarity=0.348 Sum_probs=179.4
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56788887763 2469999999999999999999999999999999999865 45899999998653
Q ss_pred c---ccccceEEEeccCCCCCCCCcHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
. ...++.++|++|+...++.+|+.|++.++... ..... ..+..++.++++++.+++.+..++. +..|||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 141 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGR-LSAEDNARVNQAMEQTRINHLADRR-----LTDLSG 141 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccC-CCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCH
Confidence 2 23445699999998888889999999875211 10011 1123345678899999998777765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (255)
T PRK11231 142 GQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQ 219 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEE
Confidence 9999999999999999999999999999999999999999998777999999999986 57889999999985 789999
Q ss_pred cCCC
Q 000612 1091 GPLG 1094 (1391)
Q Consensus 1091 G~~~ 1094 (1391)
|+..
T Consensus 220 ~~~~ 223 (255)
T PRK11231 220 GTPE 223 (255)
T ss_pred cCHH
Confidence 8863
No 293
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=327.74 Aligned_cols=220 Identities=22% Similarity=0.295 Sum_probs=172.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1391)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.+
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (255)
T PRK11300 19 LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREM 95 (255)
T ss_pred EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765332 23589999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.++....... +...... +. +..+ ....+....++++++.+||++..+..+
T Consensus 96 tv~enl~~~~~~~~~~---~~~~~~~------~~-~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 151 (255)
T PRK11300 96 TVIENLLVAQHQQLKT---GLFSGLL------KT-PAFR---------RAESEALDRAATWLERVGLLEHANRQA----- 151 (255)
T ss_pred cHHHHHHHhhhccccc---hhhhhhc------cc-cccc---------cchhHHHHHHHHHHHhCChhhhhhCCh-----
Confidence 9999999864311000 0000000 00 0000 000012234667889999976655544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ ..+++||.++|+..++.+.+|++++|++|
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 32456666788899999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+.+++.
T Consensus 231 ~i~~~~~~~~~~ 242 (255)
T PRK11300 231 TPLANGTPEEIR 242 (255)
T ss_pred eEEecCCHHHHh
Confidence 999999988763
No 294
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=331.17 Aligned_cols=204 Identities=23% Similarity=0.349 Sum_probs=166.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCC-C
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN-H 237 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~-~ 237 (1391)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .
T Consensus 21 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 21 RALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 5999999999999999999999999999999999999998 999999998875421 1356999999862 3
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-cccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1391)
+...||+||+.|.....+... ++....++++++.+||.. ..+.
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 141 (280)
T PRK13649 98 LFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEK-- 141 (280)
T ss_pred hccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC--
Confidence 345799999987643221100 001123566788899963 3443
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEE
Q 000612 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1391)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ii 396 (1391)
.++.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++||.++|+..++.+++|+++
T Consensus 142 ---~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 142 ---NPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEE
Confidence 3456999999999999999999999999999999999999999999998753 3 4556667888889999999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000612 397 LLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1391)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 217 VLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988764
No 295
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=327.38 Aligned_cols=217 Identities=19% Similarity=0.246 Sum_probs=178.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+|||||||||++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367889988774 236999999999999999999999999999999999976432 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.++.. ..+++.++|++|++.+++.+||+||+.+....+. ..+.+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999988899999999988654331 1123344556888999999842 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 468999999999999999999999999999999999999999999999864 699999999986 5778899999997
Q ss_pred c-----CcEEEEecCC
Q 000612 1083 R-----GGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~-----gG~~~y~G~~ 1093 (1391)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4899999985
No 296
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.52 Aligned_cols=213 Identities=25% Similarity=0.372 Sum_probs=177.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 46788887763 1358999999999999999999999999999999999875 45899999998753
Q ss_pred c-----ccccceEEEeccCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 Q-----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
. ...++.++|++|++.. ....|+.|++.+....+ ....++.++.++++++.+++.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1245679999998753 34568999998764332 123334445678899999998877665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 46788999999986 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9975
No 297
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=325.47 Aligned_cols=219 Identities=21% Similarity=0.284 Sum_probs=175.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCC---CCCeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 931 (1391)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+..+..... .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 6999999876543311 11223445678899999986432111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999985 5899999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999985
No 298
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=325.35 Aligned_cols=200 Identities=25% Similarity=0.399 Sum_probs=165.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4899999999999999999999999999999999999998 9999999988754322 357999999887776 69
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1391)
|+||+.++....+ . ....++++++.+||+ +..++ .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999986532110 0 001245678889996 33443 34
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
..|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++....+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999998754224 45666888889999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 299
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=327.16 Aligned_cols=209 Identities=20% Similarity=0.300 Sum_probs=165.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCcC-----ccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|.++.... .++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 48999999999999999999999999999999999987510 12899999998864321 235699999988777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +||+||+.|+.+..+... + +....++++++.+|+........ +
T Consensus 106 ~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 149 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRL-K 149 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-c
Confidence 7 899999998653321100 0 01123566788888742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..++.|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++. .+ ++|+.++|+..++.+++|+|++|
T Consensus 150 ~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d~i~~l 226 (258)
T PRK14268 150 SPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISDYTGFF 226 (258)
T ss_pred CChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCCEEEEE
Confidence 3345699999999999999999999999999999999999999999999874 23 55666888889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+++++.
T Consensus 227 ~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 227 LMGELIEFGQTRQIF 241 (258)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 300
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=326.34 Aligned_cols=220 Identities=23% Similarity=0.307 Sum_probs=176.9
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC---CCeEEEEEEEc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITIS 930 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~---~~~~~G~i~i~ 930 (1391)
..++++|+++.++ ++.+|+|+|++|++||+++|+|+|||||||||++|+|... ..+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999998874 1358999999999999999999999999999999999642 11357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
|.++.. ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987642 134567999999988777 5999999886543311 12233345678899999985422111111 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 6899999999999999999999999999999999999999999999985 4799999999986 47788999999986 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 99998875
No 301
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=328.10 Aligned_cols=204 Identities=25% Similarity=0.350 Sum_probs=169.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc----------------CccceEE
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----------------VPQRTAA 229 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~~ 229 (1391)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (257)
T PRK10619 19 EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLT 95 (257)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceE
Confidence 4999999999999999999999999999999999999988 99999999876421 1135799
Q ss_pred EEcCCCCCCCCCCHHHHHHHhhh-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCC
Q 000612 230 YISQHDNHIGEMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1391)
Q Consensus 230 yv~Q~d~~~~~lTVrE~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1391)
|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+||
T Consensus 96 ~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl 141 (257)
T PRK10619 96 MVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVGI 141 (257)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcCC
Confidence 99999988999999999987532 11100 00112245678889999
Q ss_pred cccc-cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchh
Q 000612 309 DVCA-DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPE 387 (1391)
Q Consensus 309 ~~~~-dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~ 387 (1391)
.+.. + ..++.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|+..+
T Consensus 142 ~~~~~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~ 214 (257)
T PRK10619 142 DERAQG-----KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGF 214 (257)
T ss_pred Chhhhh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHH
Confidence 7643 3 33557999999999999999999999999999999999999999999998753 3 4555667888899
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 000612 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 388 ~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
+.++||+|++|++|++++.|+++++.
T Consensus 215 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 215 ARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 99999999999999999999988764
No 302
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.34 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=181.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|++++++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 578899988874 2469999999999999999999999999999999999875 4579999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.++|++|++..++..|++|++.+...-..+ .....+..++.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 33 22345799999999888889999999875211100 0001123345678999999998776665 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 58889999999985 79999
Q ss_pred ecCCC
Q 000612 1090 VGPLG 1094 (1391)
Q Consensus 1090 ~G~~~ 1094 (1391)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 99863
No 303
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.4e-34 Score=328.85 Aligned_cols=206 Identities=26% Similarity=0.343 Sum_probs=169.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1391)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999998 9999999988764322 35699999986 4
Q ss_pred CCCCCCHHHHHHHhhhhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 000612 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1391)
+.+.+||+||+.+..... ... ..+....++++++.+||+ ...+.
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 667899999998754211 000 000122456788999995 44554
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
. ++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++||.++|+...+.+++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQ-AFGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHHHhcE
Confidence 3 456999999999999999999999999999999999999999999998764 3245566688899999999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000612 395 IILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1391)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998774
No 304
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.9e-34 Score=321.28 Aligned_cols=195 Identities=24% Similarity=0.334 Sum_probs=162.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 16 QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 4999999999999999999999999999999999999988 999999998875432 1357999999988889
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.+.....+... ++....++.+++.+||++..++.
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 134 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNF---- 134 (222)
T ss_pred cccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC----
Confidence 9999999988653321100 00112345678889997655544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+..|||||||||+||+||+.+|++|+|||||+|||..+...+.+.|+++.+ . +++|+.++|+..++...+|+|++|+
T Consensus 135 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (222)
T PRK10908 135 -PIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLS 211 (222)
T ss_pred -chhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 456999999999999999999999999999999999999999999998753 3 4566668889999999999999999
Q ss_pred CCeEE
Q 000612 400 DGQIV 404 (1391)
Q Consensus 400 ~G~iv 404 (1391)
+|+++
T Consensus 212 ~G~i~ 216 (222)
T PRK10908 212 DGHLH 216 (222)
T ss_pred CCEEc
Confidence 99985
No 305
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=313.48 Aligned_cols=190 Identities=59% Similarity=0.947 Sum_probs=162.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++... .++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 467899988875210 12469999999999999999999999999999999999743224689999999876
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
. ..+++.++|++|++.+++.+|++|++.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345567999999998889999999998742110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998744678899999998658999876
No 306
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=327.35 Aligned_cols=219 Identities=21% Similarity=0.259 Sum_probs=179.1
Q ss_pred CCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--C-CeEEEEE
Q 000612 851 FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNI 927 (1391)
Q Consensus 851 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i 927 (1391)
.+...++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|
T Consensus 9 ~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i 75 (260)
T PRK10744 9 TAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI 75 (260)
T ss_pred CCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE
Confidence 3445688999998874 1358999999999999999999999999999999999753 1 1358999
Q ss_pred EEcCccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccc
Q 000612 928 TISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQS 998 (1391)
Q Consensus 928 ~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~ 998 (1391)
.++|.+... ..+++.++|++|+..+++ .|++||+.+...... ..+.++.+++++++++.+++.+ ..+.
T Consensus 76 ~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 76 LLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred EECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 999987531 234567999999988777 899999987653221 1233444556889999999843 2333
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeE
Q 000612 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1391)
Q Consensus 999 ~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~ 1078 (1391)
. ...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|++
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i 225 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYT 225 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEE
Confidence 2 46799999999999999999999999999999999999999999999985 4789999999986 467889999
Q ss_pred EEEecCcEEEEecCC
Q 000612 1079 FLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1079 ~ll~~gG~~~y~G~~ 1093 (1391)
++|++ |+++..|+.
T Consensus 226 ~~l~~-G~i~~~g~~ 239 (260)
T PRK10744 226 AFMYL-GELIEFGNT 239 (260)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799999875
No 307
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=329.48 Aligned_cols=217 Identities=27% Similarity=0.373 Sum_probs=179.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478899987763 2469999999999999999999999999999999999865 4579999999765
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..+++.++|++|+..+++.+|+.|++.+....... ........++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888889999999875321110 00111223456789999999987766653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57788999999985 78999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 9875
No 308
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.2e-35 Score=365.65 Aligned_cols=256 Identities=23% Similarity=0.331 Sum_probs=194.5
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.....+|+.++++.+++. . +....+.+...++++|+++.++.
T Consensus 284 ~~~~~~~~~ri~~~l~~~~~~-----~---~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 328 (544)
T TIGR01842 284 FSGARQAYKRLNELLANYPSR-----D---PAMPLPEPEGHLSVENVTIVPPG--------------------------- 328 (544)
T ss_pred HHHHHHHHHHHHHHHhCCccc-----c---CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 478888899998888765541 0 01112223457999999998732
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
.++++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|+
T Consensus 329 -----~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~ 400 (544)
T TIGR01842 329 -----GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQD 400 (544)
T ss_pred -----CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCC
Confidence 1134899999999999999999999999999999999999998 9999999998876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+++ .|++||+.++.. ....+.+.++++.. ..++.++. |++..||
T Consensus 401 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~~---------------------------~~~~~i~~--l~~gl~t 446 (544)
T TIGR01842 401 VELFP-GTVAENIARFGE----NADPEKIIEAAKLA---------------------------GVHELILR--LPDGYDT 446 (544)
T ss_pred ccccc-ccHHHHHhccCC----CCCHHHHHHHHHHh---------------------------ChHHHHHh--Ccccccc
Confidence 87665 599999985421 11112222211110 12233333 4566789
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ ..||||||||++||||++++|++++|||||||||+.++..+.+.|+++.. .++|+|+ ++|+.+ ..+.+|+
T Consensus 447 ~~~~~g-~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~-ith~~~-~~~~~d~ 522 (544)
T TIGR01842 447 VIGPGG-ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVV-ITHRPS-LLGCVDK 522 (544)
T ss_pred ccCCCc-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEE-EeCCHH-HHHhCCE
Confidence 998754 56999999999999999999999999999999999999999999987642 3455555 555544 5678999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|++++.|+++++.+
T Consensus 523 i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 523 ILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EEEEECCEEEeeCCHHHHhh
Confidence 99999999999999988753
No 309
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.7e-34 Score=328.42 Aligned_cols=223 Identities=23% Similarity=0.296 Sum_probs=178.9
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++.....+ ..+.+.+|+|+|++|++||++||+|+|||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 66788888774210000 0013569999999999999999999999999999999999865 45899999998754
Q ss_pred cc------cccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000612 936 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1391)
.. ..++.++|++|++ .+.+.+||+|++.+..... ........++.++++++.+++. +..+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1346799999996 4667899999997654311 1122333455688999999995 555554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 46778999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999886
No 310
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=336.23 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=168.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++.++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 4999999999999999999999999999999999998631 01289999999988532 2246799999988766
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.||+||+.|+....+... .+ ..+..++.+++.++|.+..++.+++
T Consensus 176 -~~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhhC
Confidence 5899999998653321100 00 0111244566777775544555554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
....|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ + .+|++++|....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998642 3 55666888889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999884
No 311
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=321.26 Aligned_cols=205 Identities=28% Similarity=0.356 Sum_probs=171.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
.+|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++..++.+|++
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 5999999999999999999999999999999999999998 9999999998764332 46799999998888899999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.+.....+.. . ......++++++.+||++..++.+ ..|
T Consensus 91 ~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (232)
T cd03300 91 ENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQL 131 (232)
T ss_pred HHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hhC
Confidence 9998765432110 0 001123567888999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
|||||||++||++|+.+|++++|||||+|||..++..+.+.|+++....+ .+|+.++|+..++.+.+|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~-~tiii~sh~~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELG-ITFVFVTHDQEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998764224 45555778888899999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999887663
No 312
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=331.22 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=168.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1391)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 48999999999999999999999999999999999998871123999999998764322 357999999864 67789
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
||+||+.|..+..+.. .++...+++.+++.+||++..++. +
T Consensus 101 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~-----~ 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSE-----P 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----c
Confidence 9999998764322110 001123466788999998766544 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++|+.++|+..++ ..+|++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999876432 44555567777777 579999999999
Q ss_pred eEEEecChhHHHH
Q 000612 402 QIVYQGPRELVLE 414 (1391)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1391)
++++.|+++++..
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988743
No 313
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.6e-34 Score=321.60 Aligned_cols=197 Identities=27% Similarity=0.335 Sum_probs=161.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5999999999999999999999999999999999999998 9999999998765432 24699999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.+.....+.. . .+....++++++.+||.+..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGES-S---------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 9999999998764322110 0 001224567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..||||||||++||++|+.+|++|+|||||+|||..+...+.+.|++++...+ ++|+.++|+..++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHG-TTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754334 4555577777776 559999999
Q ss_pred cCCeEEEe
Q 000612 399 SDGQIVYQ 406 (1391)
Q Consensus 399 ~~G~iv~~ 406 (1391)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 314
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.9e-34 Score=320.22 Aligned_cols=213 Identities=25% Similarity=0.349 Sum_probs=175.6
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++... ....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 478899988774210 11358999999999999999999999999999999999865 4589999999875
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000612 935 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1391)
Q Consensus 935 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1391)
.... . ++.++|++|++.+++.+|+.|++.+....+. ....+.+++++++++.+++.+..+.. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 4311 1 2569999999988888999999988654321 22334456788999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999986 34 56999999986 67
Q ss_pred EEE
Q 000612 1087 EIY 1089 (1391)
Q Consensus 1087 ~~y 1089 (1391)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 754
No 315
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=337.44 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=171.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1391)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 459999999999999999999999999999999999986411 128999999998765432 236999999875
Q ss_pred --CCCCCCHHHHHHHhhhhcCC-CchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 237 --HIGEMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 237 --~~~~lTVrE~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
+.+.+||.+++.+....... +... .+ ..+....+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QR-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------cc-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999764321100 0000 00 0011234677899999975321
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
+.+..+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+.+||.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCC
Confidence 12345567999999999999999999999999999999999999999999999754 335567778999999999999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000612 394 DIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1391)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998774
No 316
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-35 Score=345.01 Aligned_cols=213 Identities=26% Similarity=0.425 Sum_probs=180.7
Q ss_pred CCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcC
Q 000612 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1391)
Q Consensus 852 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1391)
++..++.+|++|.++. .+++++|+|+++++|+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 4556777799998862 2379999999999999999999999999999999999886 3689999999
Q ss_pred ccCC---cccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc------ccccC
Q 000612 932 YPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ------SLVGL 1002 (1391)
Q Consensus 932 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~------~~vg~ 1002 (1391)
.+.. ...+++.++||+|++.+++ -|++||+.++. ++.++ +.+.++++..+|.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s~----e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDASD----EEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCCH----HHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 4568899999999998876 59999998752 22222 34778888888876654 44444
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3579999999999999999999999999999999999999999999999976 599999999974 567789999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799999875
No 317
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=329.05 Aligned_cols=204 Identities=27% Similarity=0.368 Sum_probs=167.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC--cC---ccceEEEEcCCCC-CCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--FV---PQRTAAYISQHDN-HIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .. .++.++|++|++. .+.
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 4899999999999999999999999999999999999998 9999999998742 11 1356999999864 345
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
..|+.||+.+.....+... .+....++++++.+||++..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc---
Confidence 6789999987643221100 001123566788999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. .+ ++||.++|+..++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998753 34 456668889999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 318
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=343.51 Aligned_cols=201 Identities=24% Similarity=0.300 Sum_probs=174.1
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCCCC
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIHS 953 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~~~ 953 (1391)
..+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.++... . .++.+||++|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 458999999999999999999999999999999999876 4589999999876431 1 134799999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000612 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1391)
Q Consensus 954 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDE 1033 (1391)
+.+||+||+.|....+. ...++.++.++++++.++|.+..+.. +..|||||||||+|||+|+.+|++|+|||
T Consensus 119 ~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999998765432 23344556788999999998877766 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1034 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1034 PTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 4899999999986 57788999999985 799999875
No 319
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=328.37 Aligned_cols=204 Identities=28% Similarity=0.389 Sum_probs=168.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc--C---ccceEEEEcCCCC-CCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHDN-HIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1391)
.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|.++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 4999999999999999999999999999999999999998 99999999887421 1 1357999999863 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+||+||+.++....+. .. .+....+.++++.+||.+..++.+
T Consensus 93 ~~tv~e~i~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~L~~~~~~~~--- 135 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL--SK--------------------------------EEVEKRVKEALKAVGMEGFENKPP--- 135 (275)
T ss_pred cccHHHHHHHHHHHcCC--CH--------------------------------HHHHHHHHHHHHHCCCchhhcCCh---
Confidence 67999999876422110 00 001123567889999987776654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+.||++++|+
T Consensus 136 --~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 136 --HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45999999999999999999999999999999999999999999998754 3 4556668888999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 320
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=330.05 Aligned_cols=214 Identities=28% Similarity=0.356 Sum_probs=178.4
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++ +++.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56788887763 12358999999999999999999999999999999999865 45799999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.+..+..+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999863 333479999998764321 2234444566889999999988877663 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 47778999999986 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9985
No 321
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=331.55 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=176.6
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888888774210 001358999999999999999999999999999999999865 45899999998753
Q ss_pred c-------ccccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000612 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1391)
Q Consensus 936 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1005 (1391)
. ..+++.++|++|++ .+++ .||+|++.+..... ..+.++.++.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999986 3444 69999998764332 1233444556788999999963 44544 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 47778999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 99998875
No 322
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=325.14 Aligned_cols=203 Identities=27% Similarity=0.355 Sum_probs=167.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC------c---CccceEEEEcCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE------F---VPQRTAAYISQHDN 236 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4999999999999999999999999999999999999988 9999999987621 1 11356999999998
Q ss_pred CCCCCCHHHHHHHhh-hhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 237 HIGEMTVRETLAFSA-RCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
+++.+||+||+.+.. ...+.. . .+....++++++.+||++..+..
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS-K---------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 999999999997532 111110 0 00112456788899998666654
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+ +.|||||||||+|||+|+.+|++++|||||+|||..+...+.+.|+++.. . +++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998743 3 455666788888999999999
Q ss_pred EEEcCCeEEEecChhHH
Q 000612 396 ILLSDGQIVYQGPRELV 412 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1391)
++|++|++++.|+++++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 323
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-35 Score=332.80 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=195.4
Q ss_pred HHHHHhhhccccChHHHHHHHHHHHhhcCCC-CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCc
Q 000612 83 RLIDKLVKVTDVDNERFLLKLKNRIDRVGID-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSK 161 (1391)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 161 (1391)
.-+|+.++..+...+ ..++.+...+. .....|.|+|+++.+++
T Consensus 231 tdme~mfdLl~~~~~-----v~d~pda~~L~~~~~g~v~F~~V~F~y~~------------------------------- 274 (497)
T COG5265 231 TDMEKMFDLLDVEAE-----VSDAPDAPPLWPVRLGAVAFINVSFAYDP------------------------------- 274 (497)
T ss_pred hhHHHHHHhhccchh-----hccCCCCccccccccceEEEEEEEeeccc-------------------------------
Confidence 334444444444443 34444433333 33567999999998853
Q ss_pred cccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCC
Q 000612 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHI 238 (1391)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 238 (1391)
++++|+|+|+++++|++++++||+|+||||++++|-++++++ +|.|++||+++.+... ++.||.|||+-.+
T Consensus 275 --~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDtvL- 348 (497)
T COG5265 275 --RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDTVL- 348 (497)
T ss_pred --cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCccccee-
Confidence 235999999999999999999999999999999999999998 9999999999876543 4789999996554
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
.+.|+..|+.++. +....+....+++..+. ... +-.|++++||.||+
T Consensus 349 FNDti~yni~ygr----~~at~eev~aaa~~aqi---------------------------~~f--i~~lP~gy~t~Vge 395 (497)
T COG5265 349 FNDTIAYNIKYGR----PDATAEEVGAAAEAAQI---------------------------HDF--IQSLPEGYDTGVGE 395 (497)
T ss_pred hhhhHHHHHhccC----ccccHHHHHHHHHHhhh---------------------------hHH--HHhCchhhhcccch
Confidence 4679999999875 22222222222221111 111 23489999999999
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
++.+ |||||||||+|||+++.+|+||++||.||+||+.|.+.|...|++.+ .++|+++.- |+..+.--+|.|++|
T Consensus 396 rglk-lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~--~~rttlvia--hrlsti~~adeiivl 470 (497)
T COG5265 396 RGLK-LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS--AGRTTLVIA--HRLSTIIDADEIIVL 470 (497)
T ss_pred heee-ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh--CCCeEEEEe--ehhhhccCCceEEEe
Confidence 9987 99999999999999999999999999999999999999999999875 345555533 456677789999999
Q ss_pred cCCeEEEecChhHHHH
Q 000612 399 SDGQIVYQGPRELVLE 414 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1391)
++|+|++.|++++++.
T Consensus 471 ~~g~i~erg~h~~ll~ 486 (497)
T COG5265 471 DNGRIVERGTHEELLA 486 (497)
T ss_pred eCCEEEecCcHHHHHH
Confidence 9999999999999976
No 324
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-34 Score=321.20 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=179.4
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
.++|+++.++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677877763 2469999999999999999999999999999999999875 357999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000612 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
. ..++.++|++|++..++.+|+.|++.+....+. ......++.++++++.+++.+..+..+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 234679999999988888999999987654331 223334456788999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999986 47788999999986 799988874
No 325
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=324.96 Aligned_cols=212 Identities=24% Similarity=0.289 Sum_probs=168.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCcC---ccceEEEEcCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGE 240 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 240 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 4999999999999999999999999999999999998741 012899999998875432 23579999999888899
Q ss_pred CCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000612 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 241 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1391)
+||+||+.++.+..+.... ..+....++++++.+||.+..+.. -+..
T Consensus 97 ~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDR-LDAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hcCC
Confidence 9999999886532210000 001122356678888985421111 1234
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+.+|++++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 55799999999999999999999999999999999999999999999864 33 5566678888899999999999999
Q ss_pred CeEEEecChhHHH
Q 000612 401 GQIVYQGPRELVL 413 (1391)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1391)
|++++.|+.+++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999988764
No 326
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=328.28 Aligned_cols=220 Identities=26% Similarity=0.344 Sum_probs=180.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEEEEEEcCcc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1391)
-++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 477888887763 246999999999999999999999999999999999986532 236999999986
Q ss_pred CCc--------ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000612 934 KKQ--------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1391)
Q Consensus 934 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 1000 (1391)
... ...++.++|++|++.+++.+||.|++.+......+ .....++.+++++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999888999999999875321000 01112334456889999999987777653
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEE
Q 000612 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1391)
Q Consensus 1001 g~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ 1079 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999754 899999999986 4778899999
Q ss_pred EEecCcEEEEecCCC
Q 000612 1080 LMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1080 ll~~gG~~~y~G~~~ 1094 (1391)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7899998863
No 327
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.3e-34 Score=327.51 Aligned_cols=216 Identities=28% Similarity=0.405 Sum_probs=178.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 46678877663 2469999999999999999999999999999999999865 45799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCcHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAW-LRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 936 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~-lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
. ...++.++|++|++..++.+||.|++.+... .+........+..+.++++++.+++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----MSTLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHH
Confidence 3 2334568999999877788999999987521 11000011123345678899999998777765 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57789999999985 7899998
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 85
No 328
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.4e-34 Score=322.35 Aligned_cols=210 Identities=25% Similarity=0.313 Sum_probs=173.2
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 5677777663 2469999999999999999999999999999999999875 458999999987543
Q ss_pred c----cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHH
Q 000612 937 E----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 937 ~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~lSgG 1011 (1391)
. ..++.++|++|++.+++.+|+.|++.+....+. .. ..+..+++++.++ +.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124569999999998899999999987654321 11 1233567777776 45555554 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998764 899999999986 46678999999985 799999
Q ss_pred cCCC
Q 000612 1091 GPLG 1094 (1391)
Q Consensus 1091 G~~~ 1094 (1391)
|+..
T Consensus 214 ~~~~ 217 (230)
T TIGR03410 214 GAGD 217 (230)
T ss_pred CCHH
Confidence 9863
No 329
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.6e-34 Score=317.67 Aligned_cols=201 Identities=19% Similarity=0.296 Sum_probs=151.6
Q ss_pred CceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCc
Q 000612 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1391)
Q Consensus 853 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1391)
|..+..+||+|.++ +.+.++++++|-|.-...+||+||||.||||||++|.|..++ ..|+..-|.
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKnh- 648 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKNH- 648 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhccc-
Confidence 44677889988875 446789999999999999999999999999999999998763 356543221
Q ss_pred cCCcccccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 933 PKKQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
+-.+|+..|+.. +...-|.-|.|.-. + +.+.+ .....|-.+||...++++- +..|||
T Consensus 649 -------rL~iG~FdQh~~E~L~~Eetp~EyLqr~--F----Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 649 -------RLRIGWFDQHANEALNGEETPVEYLQRK--F----NLPYQ----EARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred -------eeeeechhhhhHHhhccccCHHHHHHHh--c----CCChH----HHHHHhhhhhhhhccceEe----eeecCC
Confidence 234788777632 33445666655421 1 12221 2355788889988888763 568999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||-||++|..-++.|+||+|||||++||.++...+-++|+++ ...||+++|+-.. |.+.-+.+.++.+.|.---.
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999987 4579999999764 55655677888765544444
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
|..
T Consensus 784 GdF 786 (807)
T KOG0066|consen 784 GDF 786 (807)
T ss_pred ccH
Confidence 443
No 330
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=318.18 Aligned_cols=195 Identities=24% Similarity=0.373 Sum_probs=162.7
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVrE~l~ 248 (1391)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999988755432 357999999998899999999998
Q ss_pred HhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000612 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1391)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1391)
++..... ... .+.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT---------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Ccc---------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7542110 000 001124567889999987666544 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000612 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1391)
Q Consensus 329 rqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1391)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++.. ..+.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHA-ETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999998754 33455666888999999999999999999998764
No 331
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=325.82 Aligned_cols=225 Identities=23% Similarity=0.261 Sum_probs=181.9
Q ss_pred cCCCCceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEE
Q 000612 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITG 925 (1391)
Q Consensus 849 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G 925 (1391)
+|..+..+.++|+++.++ .+.+|+|+|+++++||++||+|+|||||||||++|+|...+ .+.+|
T Consensus 14 ~~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G 80 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTG 80 (267)
T ss_pred cCCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcce
Confidence 344455789999998874 24699999999999999999999999999999999997642 14689
Q ss_pred EEEEcCccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000612 926 NITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1391)
Q Consensus 926 ~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 1000 (1391)
+|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.++++++.++|.+..+...
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 157 (267)
T PRK14237 81 QILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDL 157 (267)
T ss_pred EEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhh
Confidence 99999987632 124567999999988777 69999998864322 11123344566888999999864322222
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEE
Q 000612 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1391)
Q Consensus 1001 g~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~l 1080 (1391)
+. .+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.+|++++
T Consensus 158 ~~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HK-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cC-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEE
Confidence 22 246899999999999999999999999999999999999999999999985 4799999999986 57789999999
Q ss_pred EecCcEEEEecCC
Q 000612 1081 MKRGGQEIYVGPL 1093 (1391)
Q Consensus 1081 l~~gG~~~y~G~~ 1093 (1391)
|++ |++++.|+.
T Consensus 235 l~~-G~i~~~g~~ 246 (267)
T PRK14237 235 FYL-GDLIEYDKT 246 (267)
T ss_pred EEC-CEEEEeCCH
Confidence 985 799999986
No 332
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.7e-34 Score=322.95 Aligned_cols=198 Identities=23% Similarity=0.381 Sum_probs=167.0
Q ss_pred eeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHHH
Q 000612 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1391)
Q Consensus 884 L~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~ 963 (1391)
|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999875 45899999998764322 12489999999889999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000612 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1391)
Q Consensus 964 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~ 1043 (1391)
+...... .....++.++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7532111 1223344455688999999998777665 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1044 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1044 ~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57788999999985 788888764
No 333
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=332.56 Aligned_cols=205 Identities=20% Similarity=0.293 Sum_probs=166.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC----c----CccceEEEEcCCCC-
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----F----VPQRTAAYISQHDN- 236 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 236 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4999999999999999999999999999999999999988 9999999987642 1 12357999999863
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1391)
.+...||+||+.|+....+.. . ++....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN-K---------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 233469999998864322110 0 00112356678889995 445543
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++||.++|+.+++.+.+|++
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999987653 3455666888888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 334
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=326.79 Aligned_cols=220 Identities=23% Similarity=0.257 Sum_probs=177.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1391)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999998874 24699999999999999999999999999999999997642 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ..+++.++|++|++..++. ||.||+.+....+.. .....+.++.++++++.+++.+........ .+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHE-PGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87632 2345679999999887774 999999987543321 112233345678899999996421111111 146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999986 46788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9999875
No 335
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.4e-34 Score=319.45 Aligned_cols=196 Identities=25% Similarity=0.344 Sum_probs=166.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE 245 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+|
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 14 TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 5999999999999999999999999999999999999998 999999998765322 357999999988888999999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.+.....+.. ...+..+++.+||++..|..+ ..||
T Consensus 90 ~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~LS 126 (223)
T TIGR03740 90 NLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQFS 126 (223)
T ss_pred HHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhCC
Confidence 998764322100 012456788899987666544 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1391)
||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.. .+ .+|+.++|+..++.+.+|++++|++|++++
T Consensus 127 ~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~ 204 (223)
T TIGR03740 127 LGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QG-ITVILSSHILSEVQQLADHIGIISEGVLGY 204 (223)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999998753 33 455567788888999999999999999999
Q ss_pred ecChh
Q 000612 406 QGPRE 410 (1391)
Q Consensus 406 ~G~~~ 410 (1391)
.|+..
T Consensus 205 ~~~~~ 209 (223)
T TIGR03740 205 QGKIN 209 (223)
T ss_pred ecChh
Confidence 99865
No 336
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=327.68 Aligned_cols=208 Identities=24% Similarity=0.400 Sum_probs=170.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 21 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 97 (265)
T PRK10253 21 TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDIT 97 (265)
T ss_pred EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCc
Confidence 4999999999999999999999999999999999999988 9999999988754332 356999999988888999
Q ss_pred HHHHHHHhhhhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000612 243 VRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1391)
Q Consensus 243 VrE~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1391)
|+||+.++..-. ...... .+.....++++++.+||++..++. +
T Consensus 98 v~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (265)
T PRK10253 98 VQELVARGRYPHQPLFTRW-------------------------------RKEDEEAVTKAMQATGITHLADQS-----V 141 (265)
T ss_pred HHHHHHhCcccccccccCC-------------------------------CHHHHHHHHHHHHHcCCHHHhcCC-----c
Confidence 999998753100 000000 000112456788899998665554 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCC
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G 401 (1391)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.. ..+++||.++|+..++.+++|++++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNR-EKGYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998764 33455666788889999999999999999
Q ss_pred eEEEecChhHHH
Q 000612 402 QIVYQGPRELVL 413 (1391)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1391)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 337
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=327.95 Aligned_cols=209 Identities=24% Similarity=0.382 Sum_probs=170.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 4999999999999999999999999999999999999988 9999999987654322 356999999888889999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.++.... .... +. . .......++.+++.+||++..++.++
T Consensus 102 v~e~l~~~~~~~-~~~~--------------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~----- 146 (265)
T PRK10575 102 VRELVAIGRYPW-HGAL--------------GR-F--------------GAADREKVEEAISLVGLKPLAHRLVD----- 146 (265)
T ss_pred HHHHHHhCcccc-cccc--------------cC-C--------------CHHHHHHHHHHHHHcCCHHHhcCCcc-----
Confidence 999998753110 0000 00 0 00012245678899999876665544
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||+||+.+|++|||||||+|||..++..+.+.|+++.+.. +++|+.++|+.+++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 599999999999999999999999999999999999999999999876432 4456667888899999999999999999
Q ss_pred EEEecChhHHH
Q 000612 403 IVYQGPRELVL 413 (1391)
Q Consensus 403 iv~~G~~~~~~ 413 (1391)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999987653
No 338
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=322.08 Aligned_cols=220 Identities=21% Similarity=0.278 Sum_probs=178.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--CC-eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1391)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478889988774 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.++.. ..+++.++|++|+..+++.+|++||+.+...... ..+..+.++.++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87532 2346679999999988899999999987543321 112233345678899999986421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999975 689999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9999985
No 339
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=324.83 Aligned_cols=212 Identities=21% Similarity=0.303 Sum_probs=167.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCC--CcC---ccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMD--EFV---PQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~~---~~~~~~yv~Q~d~~~ 238 (1391)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++. ... .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 4999999999999999999999999999999999998762 012899999999875 211 235799999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.++....+..... ++....++++++.+||....... -+
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDR-LN 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhh-hc
Confidence 9999999998865322110000 00112345677788874321111 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+||.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 340
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.4e-34 Score=317.11 Aligned_cols=198 Identities=23% Similarity=0.296 Sum_probs=167.3
Q ss_pred EeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc-ccccceEEEeccCCCCCCCCcHHHH
Q 000612 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYES 961 (1391)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~ 961 (1391)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999876 458999999987643 2345679999999998888999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000612 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1391)
Q Consensus 962 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~ 1041 (1391)
+.+...... .. ....++.++++++.++|.+..++. +..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532211 11 122345678899999998777765 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecC
Q 000612 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1391)
Q Consensus 1042 s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~ 1092 (1391)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 46778999999985 79988874
No 341
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=333.43 Aligned_cols=225 Identities=24% Similarity=0.245 Sum_probs=183.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++.+|+++.++...... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478899988875321100 00112469999999999999999999999999999999999875 3579999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000612 935 KQE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1391)
Q Consensus 935 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 1005 (1391)
... .+++.++||+|++ .+.|.+|+.+++....... .....++.++.+.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 5788899999987654332 12344555677899999999963 44544 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
..||||||||++||+||+.+|++|++||||++||..++..|+++|+++.++ |.|||++||+++ .+.+.+|++++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 689999999999999999999999999999999999999999999999764 999999999986 46678999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 342
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=332.89 Aligned_cols=223 Identities=18% Similarity=0.224 Sum_probs=179.8
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC-C-eEEEEEEEcCcc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGYP 933 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~ 933 (1391)
++++|++..++.. .+...+|+||||+|++||++||+|+||||||||+++|+|.... + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788998877531 1124699999999999999999999999999999999997642 2 358999999987
Q ss_pred CCcc---cc----cceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000612 934 KKQE---TF----ARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1391)
Q Consensus 934 ~~~~---~~----~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1391)
+... .+ ++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+..+..- ..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~--~~ 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLD--VY 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHh--CC
Confidence 6431 11 23699999997 47788999988766543221 2234555677899999999975322111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
+..|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|++++|++
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~ 229 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA 229 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 468999999999999999999999999999999999999999999999976 4999999999986 46788999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 230 -G~ive~g~~ 238 (326)
T PRK11022 230 -GQVVETGKA 238 (326)
T ss_pred -CEEEEECCH
Confidence 899999985
No 343
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=328.22 Aligned_cols=215 Identities=24% Similarity=0.309 Sum_probs=179.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 4788999887641 12458999999999999999999999999999999999875 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..+++.++|++|++. .++.+||+||+.+..... ..+.++.++.++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234667999999974 566789999998864322 1233444556889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||+++|+++. + ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 5999999999863 4 57999999985 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 9875
No 344
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.2e-34 Score=323.17 Aligned_cols=212 Identities=26% Similarity=0.331 Sum_probs=168.1
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++.+++
T Consensus 14 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 14 EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 4999999999999999999999999999999999995 566 9999999988755432 234899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-cccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMVGD 318 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg~ 318 (1391)
.+|++|++.+.......... .... ...+....++.+++.+||+. ..++.++
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~- 142 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN- 142 (243)
T ss_pred CcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc-
Confidence 99999999876432110000 0000 00111234677899999973 4454332
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhh-cCeEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL-FDDIIL 397 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~-~D~iil 397 (1391)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++||.++|+..++... +|++++
T Consensus 143 ---~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~~ 217 (243)
T TIGR01978 143 ---EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVHV 217 (243)
T ss_pred ---cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEEE
Confidence 14999999999999999999999999999999999999999999998753 3 44566678888888888 899999
Q ss_pred EcCCeEEEecChhHHH
Q 000612 398 LSDGQIVYQGPRELVL 413 (1391)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1391)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 218 LLDGRIVKSGDVELAK 233 (243)
T ss_pred EeCCEEEEecCHHHhc
Confidence 9999999999987653
No 345
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=320.88 Aligned_cols=201 Identities=23% Similarity=0.397 Sum_probs=167.9
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVrE~l~ 248 (1391)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998754332 357999999998999999999998
Q ss_pred HhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000612 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1391)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1391)
++... ..... ......++++++.+||++..++.+ +.|||||
T Consensus 94 ~~~~~-~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKLN---------------------------------AAQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred ccccc-ccCCC---------------------------------HHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 75321 00000 001124567889999987666554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecC
Q 000612 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1391)
Q Consensus 329 rqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1391)
||||+||++++.+|++++|||||+|||..++..+.+.|+++.+.. +++||.++|+..++.+.+|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999876533 4455557888889999999999999999999999
Q ss_pred hhHHH
Q 000612 409 RELVL 413 (1391)
Q Consensus 409 ~~~~~ 413 (1391)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 346
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.2e-34 Score=338.44 Aligned_cols=203 Identities=22% Similarity=0.318 Sum_probs=175.4
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCc----cCCc---cc---c-cceEEEec
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY----PKKQ---ET---F-ARISGYCE 947 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 947 (1391)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|. +... .. + ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 34678999999999999999999999999999999999876 45899999995 2211 11 2 24799999
Q ss_pred cCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000612 948 QNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1391)
Q Consensus 948 Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~ 1027 (1391)
|+..+++.+||+||+.|+...+ ..+.+++++.++++++.++|.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875443 2344556677899999999988877764 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1028 illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
||+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999764 899999999986 57889999999985 799999986
No 347
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-34 Score=318.31 Aligned_cols=194 Identities=31% Similarity=0.459 Sum_probs=159.8
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGE 240 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1391)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 45999999999999999999999999999999999999998 9999999988754322 357999999864 4678
Q ss_pred CCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000612 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 241 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1391)
+||+||+.++....+... .+....++++++.+||++..+..+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999987643221100 001123566788999976655544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998764 3 45566688888999999999999999
Q ss_pred Ce
Q 000612 401 GQ 402 (1391)
Q Consensus 401 G~ 402 (1391)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 348
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=323.77 Aligned_cols=207 Identities=22% Similarity=0.313 Sum_probs=164.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCc--C---ccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d 235 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |+ +|+|.++|+++... . .++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 49999999999999999999999999999999999864 34 89999999887531 1 135799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+++ .||+||+.++....+.... ++....++.+++.+||.+...+.
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987533221000 00112345567778875422111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
. ++.++.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++. .+ .+|+.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v 218 (253)
T PRK14242 143 L-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVT 218 (253)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEE
Confidence 1 23456799999999999999999999999999999999999999999999873 34 45666788889999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 219 AFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 349
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.3e-34 Score=320.69 Aligned_cols=212 Identities=26% Similarity=0.386 Sum_probs=179.2
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ .+.+|+|+|+++.+||+++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677777663 2369999999999999999999999999999999999865 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000612 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1391)
Q Consensus 937 ~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqR 1015 (1391)
. ..++.++|++|++.+++..|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234679999999988888999999987654331 222333456788999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1016 l~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999986 57788999999985 799999885
No 350
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-34 Score=320.36 Aligned_cols=204 Identities=27% Similarity=0.425 Sum_probs=171.0
Q ss_pred eeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHH
Q 000612 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVrE 245 (1391)
+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 457999999988899999999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.++....+... .+....++++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9987643221100 001123466788899987666554 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1391)
|||||||+||+|++.+|++++|||||+|||..++.++.+.|+++....+ ++|+.++|+.+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998754334 455557788889999999999999999999
Q ss_pred ecChhHHH
Q 000612 406 QGPRELVL 413 (1391)
Q Consensus 406 ~G~~~~~~ 413 (1391)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 351
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.1e-34 Score=374.73 Aligned_cols=257 Identities=24% Similarity=0.374 Sum_probs=196.3
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+..++|+.++++.++|.- . .+....+.....++|+||++.+..
T Consensus 421 ~~~~~~~~~ri~~~l~~~~e~~-----~-~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 467 (694)
T TIGR01846 421 FQQTGIALERLGDILNSPTEPR-----S-AGLAALPELRGAITFENIRFRYAP--------------------------- 467 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCcc-----C-CCCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 5688888999999887765510 0 011111222457999999998742
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
..+.+|+|+|++++||+.++|+|+||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 468 -----~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~ 539 (694)
T TIGR01846 468 -----DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQE 539 (694)
T ss_pred -----CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccC
Confidence 1134899999999999999999999999999999999999998 9999999999887654 4679999997
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.++ +.|++|||.++.. ....+.+.++++.. ..++.++ .|++..||
T Consensus 540 ~~lf-~~ti~eNi~~~~~----~~~~~~i~~a~~~~---------------------------~l~~~i~--~lp~gl~t 585 (694)
T TIGR01846 540 NVLF-SRSIRDNIALCNP----GAPFEHVIHAAKLA---------------------------GAHDFIS--ELPQGYNT 585 (694)
T ss_pred Ceeh-hhhHHHHHhcCCC----CCCHHHHHHHHHHc---------------------------ChHHHHH--hCcCccCc
Confidence 6555 5799999987531 11122222222111 0122222 36677899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++..+.+.|++.. .++|+|+ ++|..+ ..+.+|+
T Consensus 586 ~i~~~g-~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~-itH~~~-~~~~~d~ 660 (694)
T TIGR01846 586 EVGEKG-ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVII-IAHRLS-TVRACDR 660 (694)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEE-EeCChH-HHHhCCE
Confidence 999764 5799999999999999999999999999999999999999999998863 3455555 555544 4567999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++++|+++++.+
T Consensus 661 ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 661 IIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999865
No 352
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.6e-34 Score=320.49 Aligned_cols=205 Identities=27% Similarity=0.410 Sum_probs=170.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTVr 244 (1391)
++|+|+|+++.+|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 4999999999999999999999999999999999999988 9999999988765433 35799999998888899999
Q ss_pred HHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000612 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1391)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1391)
||+.+.....+... ......++++++.+++....++.+ +.|
T Consensus 91 enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99987654321100 000123466788899876655544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000612 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1391)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv 404 (1391)
|||||||++||++|+.+|++++|||||+|||..+...+.+.|++... ..+.+|+.++|...++.+.+|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 32445555777888899999999999999999
Q ss_pred EecChhHHH
Q 000612 405 YQGPRELVL 413 (1391)
Q Consensus 405 ~~G~~~~~~ 413 (1391)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988764
No 353
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.2e-34 Score=333.30 Aligned_cols=224 Identities=19% Similarity=0.288 Sum_probs=182.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-eEEEEEEEcCcc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1391)
-++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47889998877531 12356999999999999999999999999999999999987531 237999999987
Q ss_pred CCc---cc---cc-ceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000612 934 KKQ---ET---FA-RISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1391)
Q Consensus 934 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1391)
+.. .. ++ +.++||+|++ .+.|.+|+.+++........ ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 643 11 22 4799999997 57889999999876544322 234455556788999999997533221 1 22
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
+..||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999999765 899999999986 46678999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 899999985
No 354
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=322.37 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=175.7
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC-CeEEEEEEEcCccC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 934 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1391)
+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56778887764 24689999999999999999999999999999999997532 24589999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
.. ..+++.++|++|++.+++ .|++||+.+....+.... .....+++++++++.++|.+........ .+..||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988876 699999988654332111 1223345578899999995422111111 24679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 47788999999985 7999998
Q ss_pred CC
Q 000612 1092 PL 1093 (1391)
Q Consensus 1092 ~~ 1093 (1391)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 355
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=326.62 Aligned_cols=215 Identities=24% Similarity=0.294 Sum_probs=179.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788999887741 11358999999999999999999999999999999999875 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.++|++|++. +++..|+.+++.+..... ....++..+.++++++.+++.+..+.. +..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677789999998864322 123344455688999999998877665 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++.. +.. +|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~~-~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AME-ADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hhc-CCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 8999999999864 554 999999985 79999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 223 ~g~~ 226 (269)
T PRK13648 223 EGTP 226 (269)
T ss_pred ecCH
Confidence 9986
No 356
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=341.07 Aligned_cols=195 Identities=24% Similarity=0.362 Sum_probs=168.2
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCCCCCCCCC
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1391)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999876431 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.|+.+.. ....++++++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998763200 0123567889999987666544 5
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++.+++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999987653 34556668889999999999999999999
Q ss_pred EEEecChhHHH
Q 000612 403 IVYQGPRELVL 413 (1391)
Q Consensus 403 iv~~G~~~~~~ 413 (1391)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999874
No 357
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.6e-34 Score=364.96 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=192.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+...+|+.++.+.+++. .+ +....+....+++++|+++.+..
T Consensus 280 ~~~~~~a~~ri~~ll~~~~~~-----~~--~~~~~~~~~~~I~~~~v~~~y~~--------------------------- 325 (569)
T PRK10789 280 VERGSAAYSRIRAMLAEAPVV-----KD--GSEPVPEGRGELDVNIRQFTYPQ--------------------------- 325 (569)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cC--CCCCCCCCCCcEEEEEEEEECCC---------------------------
Confidence 556777888888877665431 00 00001112346999999988732
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
.+..+|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 326 -----~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 326 -----TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred -----CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 1134899999999999999999999999999999999999998 9999999998876543 4679999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.+++ .|++|||.++.. ....+.+.++.+. .+ .++ ....+++..||
T Consensus 398 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~---~~------------------------l~~--~i~~lp~gl~t 443 (569)
T PRK10789 398 PFLFS-DTVANNIALGRP----DATQQEIEHVARL---AS------------------------VHD--DILRLPQGYDT 443 (569)
T ss_pred Ceecc-ccHHHHHhcCCC----CCCHHHHHHHHHH---cC------------------------CHH--HHHhCcCcccc
Confidence 76665 699999987531 1111111111111 00 000 12356778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ ..||||||||++||||++++|++++|||||++||+.++..+.+.|+++. .++|+|+ ++|+. +..+.+|+
T Consensus 444 ~~~~~g-~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~-itH~~-~~~~~~d~ 518 (569)
T PRK10789 444 EVGERG-VMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVII-SAHRL-SALTEASE 518 (569)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-hHHHcCCE
Confidence 999864 4699999999999999999999999999999999999999999998853 4556655 44444 45677999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++.+|+++++.+
T Consensus 519 i~~l~~G~i~~~g~~~~l~~ 538 (569)
T PRK10789 519 ILVMQHGHIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEeCCEEEEecCHHHHHH
Confidence 99999999999999998864
No 358
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.1e-33 Score=358.14 Aligned_cols=211 Identities=25% Similarity=0.372 Sum_probs=177.6
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++++|++|+++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 46999999999851 2358999999999999999999999999999999999876 468999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.+ ..+++.+|||+|++.+++ -|++||+.++. .++.++ +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~----~~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGA----KENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccC----CCCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 457788999999998876 49999998752 112232 336677777776543 35667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999985 4899999999986 4678999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 799999985
No 359
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=329.26 Aligned_cols=219 Identities=22% Similarity=0.295 Sum_probs=180.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-+.++|+++.++.... ...+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 3778999888752100 012469999999999999999999999999999999999875 4589999999876
Q ss_pred Cc----ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 935 KQ----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. ...++.+||++|++. .+...||.|++.|..... .....+.++.++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234567999999974 233468999998875432 2234445567899999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++. +. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 9999999999874 44 4999999986 7999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99985
No 360
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=357.04 Aligned_cols=221 Identities=20% Similarity=0.301 Sum_probs=184.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|++++++ ++.+|+|||++|++||+++|+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378889988773 2469999999999999999999999999999999999875323589999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQET----FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~~~----~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.... .++.+||++|++.+++.+||+|++.+....+.....+.++.++.++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24569999999988899999999988653321111223344556889999999987777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999986 47778999999985 799999
Q ss_pred cCCCC
Q 000612 1091 GPLGR 1095 (1391)
Q Consensus 1091 G~~~~ 1095 (1391)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98753
No 361
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=325.63 Aligned_cols=208 Identities=26% Similarity=0.404 Sum_probs=169.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++|++|+..+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (255)
T PRK11231 16 RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGIT 92 (255)
T ss_pred EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCcc
Confidence 5999999999999999999999999999999999999988 9999999987654322 356999999988888899
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|.||+.++..... ... ... ..+....++++++.+||++..++.+ +
T Consensus 93 v~~~i~~~~~~~~--~~~----------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 137 (255)
T PRK11231 93 VRELVAYGRSPWL--SLW----------------GRL------------SAEDNARVNQAMEQTRINHLADRRL-----T 137 (255)
T ss_pred HHHHHHhccchhh--hhc----------------cCC------------CHHHHHHHHHHHHHcCCHHHHcCCc-----c
Confidence 9999987531000 000 000 0001224567888999987666554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+.+|++++|++|+
T Consensus 138 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 138 DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998753 3 4456667888899999999999999999
Q ss_pred EEEecChhHHH
Q 000612 403 IVYQGPRELVL 413 (1391)
Q Consensus 403 iv~~G~~~~~~ 413 (1391)
+++.|+.+++.
T Consensus 216 i~~~~~~~~~~ 226 (255)
T PRK11231 216 VMAQGTPEEVM 226 (255)
T ss_pred EEEEcCHHHhc
Confidence 99999987763
No 362
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=326.51 Aligned_cols=219 Identities=26% Similarity=0.355 Sum_probs=177.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC------eEEEEEEE
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 929 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~------~~~G~i~i 929 (1391)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56778877663 246999999999999999999999999999999999986531 12799999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 930 SGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 930 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
+|.+... ..+++.++|++|++..++.+||+|++.+....... .....++.++.++++++.+++.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987542 23455689999998766678999999875321110 0111123345678899999998766654 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhc
Q 000612 1006 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1075 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~---------~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~ 1075 (1391)
..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998765 899999999986 577789
Q ss_pred CeEEEEecCcEEEEecCCC
Q 000612 1076 DELFLMKRGGQEIYVGPLG 1094 (1391)
Q Consensus 1076 D~~~ll~~gG~~~y~G~~~ 1094 (1391)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7999999863
No 363
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=330.42 Aligned_cols=219 Identities=21% Similarity=0.303 Sum_probs=177.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++++++... .....+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 578899988874210 001248999999999999999999999999999999999875 4579999999875
Q ss_pred C--------cccccceEEEeccCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000612 935 K--------QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPG 1004 (1391)
Q Consensus 935 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 1004 (1391)
. ...+++.++|++|++.. ....|++|++.|..... ....++..+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 3 12345679999999632 22469999998864321 123334445678899999994 555554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998754 899999999986 57788999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 799999875
No 364
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=326.30 Aligned_cols=215 Identities=24% Similarity=0.318 Sum_probs=170.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC--------ccceEEEEcCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--------PQRTAAYISQHDNH 237 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~~ 237 (1391)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (262)
T PRK09984 18 QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNL 97 (262)
T ss_pred EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccccc
Confidence 4999999999999999999999999999999999999875223599999998764321 13468999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
++.+||+||+.++..... . ..... ... ...+....++++++.+||++..|..+
T Consensus 98 ~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~- 150 (262)
T PRK09984 98 VNRLSVLENVLIGALGST--P-------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV- 150 (262)
T ss_pred ccCCcHHHHHHhhhcccc--c-------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc-
Confidence 999999999987642100 0 00000 000 00011234677899999987666544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+. .+++||.++|+..++.+.+|+|++
T Consensus 151 ----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~~ 225 (262)
T PRK09984 151 ----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIVA 225 (262)
T ss_pred ----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEE
Confidence 469999999999999999999999999999999999999999999987643 345666688888999999999999
Q ss_pred EcCCeEEEecChhHH
Q 000612 398 LSDGQIVYQGPRELV 412 (1391)
Q Consensus 398 L~~G~iv~~G~~~~~ 412 (1391)
|++|++++.|+++++
T Consensus 226 l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 226 LRQGHVFYDGSSQQF 240 (262)
T ss_pred EECCEEEEeCCHHHh
Confidence 999999999998764
No 365
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.9e-34 Score=324.83 Aligned_cols=207 Identities=29% Similarity=0.426 Sum_probs=169.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 15 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 15 LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 4999999999999999999999999999999999999998 9999999988765432 346999999987788899
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.++..... .. .. .+ ..+....++++++.+||.+..++.+ .
T Consensus 92 v~e~l~~~~~~~~---------~~------~~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 136 (256)
T TIGR03873 92 VRDVVALGRIPHR---------SL------WA-GD--------------SPHDAAVVDRALARTELSHLADRDM-----S 136 (256)
T ss_pred HHHHHHhcchhhh---------hh------cc-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc-----c
Confidence 9999987531000 00 00 00 0001124567888999976666544 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||+|++.+|++++|||||+|||..+...+.+.|+++.. . +++|+.++|+..++.+.+|+|++|++|+
T Consensus 137 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 137 TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 6999999999999999999999999999999999999999999998753 3 4556668888899999999999999999
Q ss_pred EEEecChhHH
Q 000612 403 IVYQGPRELV 412 (1391)
Q Consensus 403 iv~~G~~~~~ 412 (1391)
++..|+.+++
T Consensus 215 i~~~g~~~~~ 224 (256)
T TIGR03873 215 VVAAGPPREV 224 (256)
T ss_pred EEEecCHHHh
Confidence 9999998775
No 366
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-34 Score=292.23 Aligned_cols=201 Identities=26% Similarity=0.385 Sum_probs=177.3
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHH
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYE 960 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 960 (1391)
..+|+|+|+.|.+||.++++||||||||||||+++|..+ +..|.|.+||.++....- .-|.|+|++.++|.+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 358999999999999999999999999999999999887 568999999998764322 2488999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000612 961 SLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1040 (1391)
Q Consensus 961 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~ 1040 (1391)
|+.|+..++. +++.++.+.+.+.+..+||.+..+.. +-.||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999988874 56788889999999999999988766 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecC-cEEEEecCCC
Q 000612 1041 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQEIYVGPLG 1094 (1391)
Q Consensus 1041 ~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~g-G~~~y~G~~~ 1094 (1391)
-+++.++++|-++.+ +|+.++++||+... ..-+++++++|+.| |+++..=|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieE-AlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEE-ALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHhhhheeEEecCCCceeeEecCCC
Confidence 999999999998864 59999999999764 44567999999854 6888877763
No 367
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.5e-32 Score=356.60 Aligned_cols=210 Identities=26% Similarity=0.389 Sum_probs=177.3
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46999999999863 12458999999999999999999999999999999999876 458999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+++ ..+++.+|||+|++.+++ .|++||+.++. ++.++ +.++++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 654 457889999999998875 59999998641 22232 346777888777653 35566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999985 4577999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 368
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=324.51 Aligned_cols=208 Identities=22% Similarity=0.310 Sum_probs=166.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC-----CCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP-----TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~-----~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|.++| + +|+|+++|+++... ..++.++|++|++
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 109 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRV---TGKITLDGEDIYDPRLDVVELRARVGMVFQKP 109 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---ceEEEECCEECcccccchHHHhhceEEEecCC
Confidence 499999999999999999999999999999999999874 5 89999999887531 1235799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
..++ .||+||+.|+.+..+..... .+....++++++.+||.+.....
T Consensus 110 ~~~~-~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 156 (267)
T PRK14235 110 NPFP-KSIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRKAGLWEEVKDR 156 (267)
T ss_pred CCCC-CcHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 49999999875432210000 00112356678888986421111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
. +..++.|||||||||+|||+|+.+|++|+|||||+|||..+...+.+.|+++.+ + .+|+.++|+..++.+++|++
T Consensus 157 ~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v 232 (267)
T PRK14235 157 L-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRT 232 (267)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEE
Confidence 1 234557999999999999999999999999999999999999999999998743 3 45666788889999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|+++.+|+.+++.
T Consensus 233 ~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 233 AFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 369
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.2e-34 Score=320.41 Aligned_cols=200 Identities=29% Similarity=0.403 Sum_probs=168.3
Q ss_pred ceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCCC
Q 000612 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPFV 956 (1391)
Q Consensus 880 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~l 956 (1391)
.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 110 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDL 110 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCCC
Confidence 4579999999999999999999999999999999999865 458999999976432 23456799997 556677889
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000612 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1391)
Q Consensus 957 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTs 1036 (1391)
|++|++.+....+. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 111 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 182 (236)
T cd03267 111 PVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPTI 182 (236)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999988654331 223344456788999999988777663 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1037 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1037 gLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 183 ~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 183 GLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 99999999999999998764 899999999986 57788999999985 7887765
No 370
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=324.60 Aligned_cols=229 Identities=17% Similarity=0.243 Sum_probs=177.6
Q ss_pred CCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHH
Q 000612 113 DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKT 192 (1391)
Q Consensus 113 ~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 192 (1391)
+.|...++++|+++.+. +..+|+|+|++|++|++++|+||||||||
T Consensus 8 ~~~~~~l~~~~l~~~~~----------------------------------~~~il~~isl~i~~Ge~~~i~G~nGsGKS 53 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG----------------------------------KFHALKNINLDIAKNQVTAFIGPSGCGKS 53 (260)
T ss_pred cCCCceEEEEEEEEEeC----------------------------------CeEEeeceeEEEcCCCEEEEECCCCCCHH
Confidence 45667789999998762 12499999999999999999999999999
Q ss_pred HHHHHHhcCCC--CCCCceeEEEEcCccCCCc--C---ccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHH
Q 000612 193 TLLLALAGKLD--PTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTE 265 (1391)
Q Consensus 193 TLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~ 265 (1391)
||+++|+|.++ |....+|+|.++|.++... . .++.++|++|++.+++ +||+||+.++..... +...
T Consensus 54 TLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~-~~~~----- 126 (260)
T PRK10744 54 TLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE-KLSR----- 126 (260)
T ss_pred HHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC-CCCH-----
Confidence 99999999986 2111289999999887421 1 1357999999887776 899999987653211 0000
Q ss_pred HHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccc
Q 000612 266 LARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALAL 345 (1391)
Q Consensus 266 ~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vl 345 (1391)
++....++++++.+|+........ ++....||||||||++||++|+.+|++|
T Consensus 127 ---------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~ll 178 (260)
T PRK10744 127 ---------------------------AEMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRPEVL 178 (260)
T ss_pred ---------------------------HHHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCCCEE
Confidence 001123566788888743111111 2344579999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhHHH
Q 000612 346 FMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 346 lLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
+|||||+|||..++..+.+.|+++. .+ ++||.++|+..++.+++|++++|++|+++..|+.+++.
T Consensus 179 lLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 179 LLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999873 33 45666788888999999999999999999999988764
No 371
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=322.15 Aligned_cols=209 Identities=25% Similarity=0.344 Sum_probs=174.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888888763 2358999999999999999999999999999999999865 4589999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.++|++|++.+++ .|++|++.+....+ . . ..+.++++++.++|. +..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999987776 69999988753321 1 1 124577889999996 455543 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 999999999986 47788999999985 78998
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 372
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.6e-34 Score=365.13 Aligned_cols=207 Identities=24% Similarity=0.394 Sum_probs=165.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
++|+|+|++++||+.++|+|+||||||||+|+|+|+++|+ +|+|.+||.++++... ++.++||+|++.++ +.|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-ccc
Confidence 3899999999999999999999999999999999999998 9999999999887654 46899999987655 579
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
++|||.++.. ....+.+.++++.. ..+..++ .+++..||.+|+.+ +
T Consensus 425 i~~Ni~~~~~----~~~d~~i~~al~~~---------------------------~l~~~i~--~lp~gldt~i~~~g-~ 470 (588)
T PRK13657 425 IEDNIRVGRP----DATDEEMRAAAERA---------------------------QAHDFIE--RKPDGYDTVVGERG-R 470 (588)
T ss_pred HHHHHhcCCC----CCCHHHHHHHHHHh---------------------------CHHHHHH--hCcccccchhcCCC-C
Confidence 9999987531 11111122111110 0111222 36677899999864 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.||||||||++|||||+++|+|++||||||+||+.++..|.+.|++.. .++|+|+ ++|+. +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~--~~~tvIi-itHr~-~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM--KGRTTFI-IAHRL-STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--cCCEEEE-EEecH-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998753 3455555 55543 5678899999999999
Q ss_pred EEEecChhHHHH
Q 000612 403 IVYQGPRELVLE 414 (1391)
Q Consensus 403 iv~~G~~~~~~~ 414 (1391)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 373
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=325.16 Aligned_cols=215 Identities=22% Similarity=0.260 Sum_probs=175.7
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEEEEEEc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 930 (1391)
..+.++|+++.++ .+.+|+|+|++|++||+++|+|+|||||||||++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999988774 24699999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000612 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVG 1001 (1391)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 1001 (1391)
|.+... ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 987531 234567999999988877 499999988754331 111 23345677888888743 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEE
Q 000612 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1391)
Q Consensus 1002 ~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll 1081 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 467999999999999999999999999999999999999999999999854 799999999986 578899999999
Q ss_pred ec----------CcEEEEecCC
Q 000612 1082 KR----------GGQEIYVGPL 1093 (1391)
Q Consensus 1082 ~~----------gG~~~y~G~~ 1093 (1391)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 3678999886
No 374
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.7e-34 Score=320.55 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=167.5
Q ss_pred eeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCceeEEEEcCccCCCcCcc-ceEEEEcCCCC--CCC
Q 000612 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDN--HIG 239 (1391)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1391)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 99999999987544322 57999999874 556
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.+|+.||+.+.....+... .+....++++++.+||++. +...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~--~~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDP--EEVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCch--HHHHhC
Confidence 7899999977543211000 0012245678999999742 011233
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.+..|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|+++.+ ..+++|+.++|+.+++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4556999999999999999999999999999999999999999999998754 334556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988774
No 375
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=328.90 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=180.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCe-EEEEEEEcCcc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 933 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 933 (1391)
.++++|+++.++. ..+.+|+|||++|++||++||+|+||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788999887641 12358999999999999999999999999999999999865321 13899999987
Q ss_pred CCc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 934 KKQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
... ...++.+||++|++. .++..||.|++.|..... ..+.++.++.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 566789999998764322 234445556788999999998877765 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 8999999999863 4 57999999985 7999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99986
No 376
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.1e-34 Score=317.67 Aligned_cols=194 Identities=24% Similarity=0.392 Sum_probs=160.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGE 240 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~ 240 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 14 ~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 14 HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 4999999999999999999999999999999999999988 99999999876421 123579999999888889
Q ss_pred CCHHHHHHHhhh-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 241 lTVrE~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
+||+||+.++.. .++.. . .+....++++++.+|+++..++.+
T Consensus 91 ~t~~e~l~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 133 (213)
T cd03262 91 LTVLENITLAPIKVKGMS--K--------------------------------AEAEERALELLEKVGLADKADAYP--- 133 (213)
T ss_pred CcHHHHHHhHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCHhHhhhCc---
Confidence 999999987642 11100 0 001123566788899987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. . +++||.++|+..++.+++|++++|+
T Consensus 134 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l~ 209 (213)
T cd03262 134 --AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFMD 209 (213)
T ss_pred --cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 56999999999999999999999999999999999999999999998764 3 4456668888999999999999999
Q ss_pred CCeE
Q 000612 400 DGQI 403 (1391)
Q Consensus 400 ~G~i 403 (1391)
+|++
T Consensus 210 ~g~i 213 (213)
T cd03262 210 DGRI 213 (213)
T ss_pred CCcC
Confidence 9974
No 377
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.7e-34 Score=366.69 Aligned_cols=257 Identities=23% Similarity=0.376 Sum_probs=194.2
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+...+|+.++++.+++. .. +....+.....++++||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~~-----~~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 342 (571)
T TIGR02203 297 MQRGLAAAESLFTLLDSPPEK-----DT--GTRAIERARGDVEFRNVTFRYPG--------------------------- 342 (571)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CC--CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 567788888888887655431 00 00011112346999999998742
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
.+.++|+|+|+++++|+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 343 -----~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 414 (571)
T TIGR02203 343 -----RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQD 414 (571)
T ss_pred -----CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccC
Confidence 1124999999999999999999999999999999999999998 9999999998876653 4679999997
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+. +++.|++|||.++..- ....+.+.++++.. + .++.++ .|++..||
T Consensus 415 ~~-lf~~Ti~~Ni~~~~~~---~~~~~~i~~~l~~~---~------------------------l~~~i~--~lp~gldt 461 (571)
T TIGR02203 415 VV-LFNDTIANNIAYGRTE---QADRAEIERALAAA---Y------------------------AQDFVD--KLPLGLDT 461 (571)
T ss_pred cc-cccccHHHHHhcCCCC---CCCHHHHHHHHHHc---C------------------------hHHHHH--hCcCcccc
Confidence 75 5567999999876310 01111222221110 0 111222 36677899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+.+ +.||||||||++||||++++|+|++||||||+||..++..|.+.|++.. .++|+|+ ++|+. +..+.||+
T Consensus 462 ~i~~~g-~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIi-itH~~-~~~~~~D~ 536 (571)
T TIGR02203 462 PIGENG-VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLV-IAHRL-STIEKADR 536 (571)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eehhh-HHHHhCCE
Confidence 999874 5699999999999999999999999999999999999999999998753 3456555 44443 66788999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++..|+++++.+
T Consensus 537 ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 537 IVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999998854
No 378
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=320.24 Aligned_cols=211 Identities=21% Similarity=0.289 Sum_probs=175.8
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++. + ..|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 467888887741 1 238999999999999999999999999999999865 45799999998754
Q ss_pred cc-cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 936 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12457999999998889899999998753211 111 1233556889999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999985 799999885
No 379
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.7e-34 Score=314.53 Aligned_cols=189 Identities=23% Similarity=0.370 Sum_probs=161.5
Q ss_pred eEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC---c----ccccceEEEeccCCCCC
Q 000612 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 953 (1391)
Q Consensus 881 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 953 (1391)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999875 45899999998742 1 12356799999999888
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000612 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1391)
Q Consensus 954 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDE 1033 (1391)
+..|++||+.+....+ .....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999999865432 1233444566889999999987777653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEE
Q 000612 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1391)
Q Consensus 1034 PTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll 1081 (1391)
||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999985 34689999875
No 380
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4.3e-34 Score=338.78 Aligned_cols=199 Identities=25% Similarity=0.410 Sum_probs=169.1
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCCCCCCCC
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1391)
|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 999999998874321 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.|+.+... . .+....++++++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998653210 0 001123567889999987766554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++|+.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999876533 4456667888999999999999999999
Q ss_pred EEEecChhHHH
Q 000612 403 IVYQGPRELVL 413 (1391)
Q Consensus 403 iv~~G~~~~~~ 413 (1391)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988774
No 381
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-34 Score=325.57 Aligned_cols=205 Identities=22% Similarity=0.291 Sum_probs=168.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCCCC-CCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 240 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1391)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999998 999999998875422 2457999999864 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000612 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1391)
Q Consensus 241 lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1391)
.||.||+.++....+.. + ++....++++++.+||.+..++.
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 137 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTRE----- 137 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCC-----
Confidence 99999998764321110 0 00112456778889997766654
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 456999999999999999999999999999999999999999999998764 32445555788888876 6999999999
Q ss_pred CeEEEecChhHHH
Q 000612 401 GQIVYQGPRELVL 413 (1391)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1391)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998874
No 382
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=7.1e-34 Score=325.16 Aligned_cols=207 Identities=22% Similarity=0.261 Sum_probs=169.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC--CCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN--HIG 239 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1391)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +.+
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 45999999999999999999999999999999999999998 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGD 318 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1391)
.+||.|++.+..+...... ..+....++.+++.+||. +..++.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------------------------------PEQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCChHHHhcC---
Confidence 8899999987653221000 001112456789999994 444543
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ..+++||.++|+..++..+||++++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQE-KQGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 346999999999999999999999999999999999999999999998764 33455666888889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 383
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.2e-34 Score=315.03 Aligned_cols=199 Identities=21% Similarity=0.336 Sum_probs=164.6
Q ss_pred eeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-ccceEEEEcCCCCCCCCCCHHH
Q 000612 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVRE 245 (1391)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTVrE 245 (1391)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999998 999999999875432 2467999999998999999999
Q ss_pred HHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000612 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1391)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1391)
|+.+...... ... .+....++++++.+||++..++. ++.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRL-----PEQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCC-----cccCC
Confidence 9987532100 000 00112356678999998666654 44699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000612 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1391)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1391)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|+.++|+..++.+.+|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998754 334556668888889999999999999999998
Q ss_pred ecC
Q 000612 406 QGP 408 (1391)
Q Consensus 406 ~G~ 408 (1391)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 384
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-34 Score=395.41 Aligned_cols=257 Identities=19% Similarity=0.226 Sum_probs=197.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHh-hcCCC-CC-cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhH
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRID-RVGID-LP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1391)
.+.....+||+.++.+.++|.- ...+ ....+ -| ..+|+|+||++.|..
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~~-----~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~------------------------ 1249 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEAP-----LVIENNRPPPGWPSSGSIKFEDVVLRYRP------------------------ 1249 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCccc-----ccccCCCCCCCCCCCCcEEEEEEEEEeCC------------------------
Confidence 3677888999999887665520 0000 00011 12 357999999999842
Q ss_pred hhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEE
Q 000612 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1391)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1391)
...++|+|+|++|+|||.++|+|++|||||||+++|.|+++|+ +|+|.+||.++++... ++.++||
T Consensus 1250 --------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~---~G~I~IDG~dI~~i~l~~LR~~IsiV 1318 (1622)
T PLN03130 1250 --------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELE---RGRILIDGCDISKFGLMDLRKVLGII 1318 (1622)
T ss_pred --------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCEecccCCHHHHHhccEEE
Confidence 1124999999999999999999999999999999999999998 9999999999987654 4789999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000612 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1391)
Q Consensus 232 ~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1391)
+|++.+|. .||||||.++.. ...+.+.+++++.. .++.+ -.++..
T Consensus 1319 pQdp~LF~-GTIreNLd~~~~-----~tdeei~~Al~~a~---------------------------l~~~I--~~lp~G 1363 (1622)
T PLN03130 1319 PQAPVLFS-GTVRFNLDPFNE-----HNDADLWESLERAH---------------------------LKDVI--RRNSLG 1363 (1622)
T ss_pred CCCCcccc-ccHHHHhCcCCC-----CCHHHHHHHHHHcC---------------------------cHHHH--HhCccc
Confidence 99887665 699999986421 11222333322211 01111 246778
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhh
Q 000612 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1391)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1391)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++| +|++.|.. ++...
T Consensus 1364 Ldt~Vge~G~-nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~~~T-vI~IAHRL-~tI~~ 1438 (1622)
T PLN03130 1364 LDAEVSEAGE-NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCT-MLIIAHRL-NTIID 1438 (1622)
T ss_pred cCccccCCCC-CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCE-EEEEeCCh-HHHHh
Confidence 8999998655 699999999999999999999999999999999999999999999853 3444 45566654 45566
Q ss_pred cCeEEEEcCCeEEEecChhHHHH
Q 000612 392 FDDIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1391)
||+|++|++|+|+++|+++++++
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999874
No 385
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.7e-34 Score=317.99 Aligned_cols=200 Identities=29% Similarity=0.459 Sum_probs=160.1
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCC--CCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHI--GEMT 242 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1391)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 35999999999999999999999999999999999999998 9999999987642 346799999987653 3489
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+||+.++..... . ..... ..+....++++++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~-~-~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHK-G-LFRRL----------------------------SKADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhcccccc-c-cccCC----------------------------CHHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 9999987542110 0 00000 0001124567888999986666544 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++||.++|+..++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999998754 3 455666888889999999999999886
Q ss_pred EEEec
Q 000612 403 IVYQG 407 (1391)
Q Consensus 403 iv~~G 407 (1391)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 386
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.33 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=167.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 34 ~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 113 (267)
T PRK14237 34 EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPF 113 (267)
T ss_pred eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCccc
Confidence 4999999999999999999999999999999999998631 01289999999887532 1245799999988777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ .||+||+.++.+..+.... ++....++++++.+||.+..+... +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~ 158 (267)
T PRK14237 114 A-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL-H 158 (267)
T ss_pred c-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-c
Confidence 6 6999999886532211000 001123556788888864322222 3
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+.+++.++||++++|
T Consensus 159 ~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l 235 (267)
T PRK14237 159 KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEEE
Confidence 4566799999999999999999999999999999999999999999999873 34 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 236 YLGDLIEYDKTRNIF 250 (267)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998763
No 387
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.5e-34 Score=320.50 Aligned_cols=202 Identities=27% Similarity=0.325 Sum_probs=165.7
Q ss_pred eecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHH
Q 000612 168 LKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETL 247 (1391)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTVrE~l 247 (1391)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999988 9999999998765332 248999999889999999999
Q ss_pred HHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChh
Q 000612 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGG 327 (1391)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1391)
.++.+....+.. ..+....++++++.+||++..++.+ +.||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 875321000000 0011223567889999987666554 469999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000612 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1391)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1391)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+.+|++++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999876533 445666788889999999999999999999998
Q ss_pred ChhHH
Q 000612 408 PRELV 412 (1391)
Q Consensus 408 ~~~~~ 412 (1391)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 388
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=330.63 Aligned_cols=221 Identities=18% Similarity=0.230 Sum_probs=179.9
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEEEEEEc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 930 (1391)
..++++|+++.++. +.+.+|+|+|++|++||++||+|+|||||||||++|+|.... .+.+|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46899999988752 123589999999999999999999999999999999997531 2357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHHHcCCcccccccccCCC
Q 000612 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVD-SETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1391)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~-~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1391)
|.++.. ..+++.++||+|++.+++ .|++||+.|+.... ..+ .+..++.++++++.++|.+-.+..++..
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~- 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA- 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-
Confidence 998742 234678999999988775 79999999864322 122 2223345678899988854333344433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
+..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~- 299 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ- 299 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 468999999999999999999999999999999999999999999999875 799999999986 46777999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|+++..|++
T Consensus 300 G~i~e~g~~ 308 (329)
T PRK14257 300 GWIEEAGET 308 (329)
T ss_pred CEEEEeCCH
Confidence 799999986
No 389
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-34 Score=318.37 Aligned_cols=199 Identities=27% Similarity=0.391 Sum_probs=171.1
Q ss_pred EeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCcHHHH
Q 000612 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYES 961 (1391)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~ 961 (1391)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +..|+|.++|.+.... ..++.++|++|++.+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999865 4579999999876431 234579999999988889999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000612 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1391)
Q Consensus 962 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~ 1041 (1391)
+.+..... .....+.++.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777663 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1042 s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 999999999986 47788999999985 799999885
No 390
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.8e-34 Score=308.69 Aligned_cols=190 Identities=49% Similarity=0.849 Sum_probs=162.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCC--CCCeEEEEEEEcCc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 932 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 932 (1391)
.++++|+++.++.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4788999888752100 01246999999999999999999999999999999999986 5 46899999998
Q ss_pred cCCcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000612 933 PKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1391)
Q Consensus 933 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1012 (1391)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445678999999998888899999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1013 rqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999777999999999987567788999999986 7887764
No 391
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.2e-34 Score=362.68 Aligned_cols=257 Identities=23% Similarity=0.355 Sum_probs=189.8
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1391)
.++.+..++|+.++.+.+++. .+..+....+.+..+++++||++.++.
T Consensus 299 ~~~~~~~~~ri~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 346 (585)
T TIGR01192 299 IFEARAKLEDFFDLEDSVFQR-----EEPADAPELPNVKGAVEFRHITFEFAN--------------------------- 346 (585)
T ss_pred HHHHHHHHHHHHHHHcCCccc-----cCCccCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 356667777777776654331 000000011122346999999998631
Q ss_pred cCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000612 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1391)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1391)
+ .++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 347 ---~---~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 417 (585)
T TIGR01192 347 ---S---SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQD 417 (585)
T ss_pred ---C---CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 23899999999999999999999999999999999999998 9999999998876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000612 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1391)
Q Consensus 235 d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1391)
+.++ +.|++||+.++.. ....+.+.++++.. + .++. ...+++..||
T Consensus 418 ~~lf-~~ti~~Ni~~~~~----~~~~~~~~~a~~~~---~------------------------~~~~--i~~l~~g~~t 463 (585)
T TIGR01192 418 AGLF-NRSIRENIRLGRE----GATDEEVYEAAKAA---A------------------------AHDF--ILKRSNGYDT 463 (585)
T ss_pred CccC-cccHHHHHhcCCC----CCCHHHHHHHHHHh---C------------------------cHHH--HHhccccccc
Confidence 7666 5799999987531 11111111111110 0 0111 1235666789
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
.+|+. ...||||||||++|||||+.+|++++|||||||||..++..+.+.|++.. .++|+|+ ++|+.+.+ +.+|+
T Consensus 464 ~~~~~-~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~~~tvI~-isH~~~~~-~~~d~ 538 (585)
T TIGR01192 464 LVGER-GNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--KNRTTFI-IAHRLSTV-RNADL 538 (585)
T ss_pred hhcCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EEcChHHH-HcCCE
Confidence 89875 45699999999999999999999999999999999999999999998752 3455554 56655554 67999
Q ss_pred EEEEcCCeEEEecChhHHHH
Q 000612 395 IILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1391)
|++|++|+++..|+++++.+
T Consensus 539 i~~l~~G~i~~~g~~~~l~~ 558 (585)
T TIGR01192 539 VLFLDQGRLIEKGSFQELIQ 558 (585)
T ss_pred EEEEECCEEEEECCHHHHHH
Confidence 99999999999999998864
No 392
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.31 Aligned_cols=219 Identities=26% Similarity=0.290 Sum_probs=174.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--C-CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 377899988774 2358999999999999999999999999999999999632 1 12479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+........ .+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHD-SAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhc-Ccc
Confidence 87532 234567999999988777 899999988643321 112233345678889999875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 225 i~~~g~~ 231 (252)
T PRK14239 225 LIEYNDT 231 (252)
T ss_pred EEEeCCH
Confidence 9999885
No 393
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=331.65 Aligned_cols=222 Identities=16% Similarity=0.208 Sum_probs=178.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC--CeEEEEEEEcCcc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGYP 933 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~ 933 (1391)
+.++|++..++.. .+...+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788998877532 1235699999999999999999999999999999999997642 2457999999987
Q ss_pred CCcc---c----ccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCcccc---cc
Q 000612 934 KKQE---T----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPE---VDSETRKMFIDEVMELVELNPLR---QS 998 (1391)
Q Consensus 934 ~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~~---~~ 998 (1391)
+... . .++.++||+|++. +.|.+||.+++........... ....+.++.+.++++.++|.+.. +.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 6431 1 1246999999975 5688999999976422111000 11123456688999999997532 33
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCe
Q 000612 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1391)
Q Consensus 999 ~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~ 1077 (1391)
. +..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4689999999999999999999999999999999999999999999999864 999999999986 47788999
Q ss_pred EEEEecCcEEEEecCC
Q 000612 1078 LFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1078 ~~ll~~gG~~~y~G~~ 1093 (1391)
+++|++ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999985 899999985
No 394
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.43 Aligned_cols=215 Identities=21% Similarity=0.237 Sum_probs=176.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
-+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887763 245899999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ...++.++|++|++.+++ .|++||+.|....... ....+.+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 133567999999988887 8999999886543211 122344456788999998753 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 468999999999999999999999999999999999999999999999876 699999999986 5778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 799999986
No 395
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=320.92 Aligned_cols=219 Identities=18% Similarity=0.240 Sum_probs=174.3
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC--C-eEEEEEEEcCc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISGY 932 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~ 932 (1391)
-+++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35677777663 24689999999999999999999999999999999997531 1 35899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000612 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1391)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1391)
+... ...++.++|++|++.+++. |+.||+.+....+.. ....+..++.++++++.++|.+........ .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245679999999887775 999999886433211 112233445678899999986522111111 2468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 57788999999986 799
Q ss_pred EEecCC
Q 000612 1088 IYVGPL 1093 (1391)
Q Consensus 1088 ~y~G~~ 1093 (1391)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 396
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=320.65 Aligned_cols=209 Identities=19% Similarity=0.274 Sum_probs=165.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGK---LDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNH 237 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|. .++. ..+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 499999999999999999999999999999999997 3331 12899999999875421 13569999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
++ .||+||+.++.+..+.... +.....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999886543211000 001123567788888864322222
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000612 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iil 397 (1391)
+..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+||.++|+..++.+.+|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEEE
Confidence 23456799999999999999999999999999999999999999999999873 34 4566678888899999999999
Q ss_pred EcCCeEEEecChhHHH
Q 000612 398 LSDGQIVYQGPRELVL 413 (1391)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1391)
|++|++++.|+++++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998874
No 397
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=314.41 Aligned_cols=224 Identities=23% Similarity=0.316 Sum_probs=181.0
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC-C--CeEEEEEEEcCc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGNITISGY 932 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~-~--~~~~G~i~i~g~ 932 (1391)
++.+|++.++.... +...+++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 45678877765431 23579999999999999999999999999999999999765 2 346689999998
Q ss_pred cCCc---c---c-ccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000612 933 PKKQ---E---T-FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1391)
Q Consensus 933 ~~~~---~---~-~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 1003 (1391)
++-. . . ..+.+++++|++. +.|.+||.+.+.=......... ..++.++++.++|+.++|.+-....- .
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~--~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLK--S 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHh--h
Confidence 6432 2 1 2357999999965 6788999887654433322111 34556677889999999986432221 2
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
.+.+|||||||||.||.||+.+|++|+.||||++||...+++|+++|+++.+ .|.|+|++|||... +.+.+|||.+|+
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE
Confidence 2578999999999999999999999999999999999999999999999986 59999999999974 889999999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
. |++|+.||.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 398
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.85 Aligned_cols=219 Identities=19% Similarity=0.247 Sum_probs=176.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC--C-eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1391)
-+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478899988764 23589999999999999999999999999999999997541 1 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++.++.++++++.+++.+........ .+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87532 2345679999999888775 99999987643321 112233445678889999885421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999985
No 399
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=319.91 Aligned_cols=215 Identities=21% Similarity=0.290 Sum_probs=175.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367889888764 135899999999999999999999999999999999965311 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...++.++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 234567999999988777 8999999986543211 122334556788888888753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999985 4899999999986 5778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 799998875
No 400
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.04 Aligned_cols=211 Identities=22% Similarity=0.335 Sum_probs=166.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 49999999999999999999999999999999999987410 1289999999876421 1235799999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.++....+.... ++....++++++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 999999999886533210000 001123566788888742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..+..|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++. .+ ++||.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK--QD-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 23 45666888889999999999999
Q ss_pred c------CCeEEEecChhHHH
Q 000612 399 S------DGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~------~G~iv~~G~~~~~~ 413 (1391)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999988764
No 401
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.66 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=167.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCcc-----CCCcCc-------cceEEEEcC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 4999999999999999999999999999999999999998 9999999987 554322 235999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-
Q 000612 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1391)
Q Consensus 234 ~d--~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1391)
++ .+.+.+|+.||+.+.....+.. .. .+....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--------------------------------~~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY--------------------------------GDIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 86 3577789999997643211000 00 001123567888999963
Q ss_pred cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHh
Q 000612 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1391)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1391)
..++. +..|||||||||+|||||+.+|++|+|||||+|||..+...+.+.|+++.. ..+.+||.++|+..++.+
T Consensus 144 ~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHH
Confidence 44443 456999999999999999999999999999999999999999999998754 334566668899999999
Q ss_pred hcCeEEEEcCCeEEEecChhHHH
Q 000612 391 LFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988764
No 402
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=319.97 Aligned_cols=218 Identities=23% Similarity=0.319 Sum_probs=175.7
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcCc
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1391)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887763 235899999999999999999999999999999999975421 25899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000612 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1391)
Q Consensus 933 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1391)
+... ...++.++|++|++.+++ .|++|++.+...... ....+..++.++++++.+++.+..+.... ..+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 7542 134567999999988877 899999988653321 11223344557888999988642111111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999986 47788999999986 799
Q ss_pred EEecCC
Q 000612 1088 IYVGPL 1093 (1391)
Q Consensus 1088 ~y~G~~ 1093 (1391)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 999875
No 403
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8.5e-34 Score=324.48 Aligned_cols=223 Identities=21% Similarity=0.260 Sum_probs=179.1
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++++..+... ...+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~~----~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTGW----FRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCCc----ccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 7789998887421100 00012469999999999999999999999999999999999875 45899999998764
Q ss_pred cc---cccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000612 936 QE---TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~---~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lS 1009 (1391)
.. ..++.++|++|++. +.+.+|+.|++.+....+. .....+..+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 21 22356999999874 5677899999987654332 223334455688999999994 455544 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~ 1088 (1391)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57778999999985 7999
Q ss_pred EecCC
Q 000612 1089 YVGPL 1093 (1391)
Q Consensus 1089 y~G~~ 1093 (1391)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88875
No 404
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=319.69 Aligned_cols=210 Identities=20% Similarity=0.316 Sum_probs=165.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCcC-----ccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 4899999999999999999999999999999999998751 013899999999875321 235699999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +|++||+.|.....+.... .+....++.+++.+||.+..... -+
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 142 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDD-LK 142 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhH-hh
Confidence 6 8999999886543221000 00112345667788774211111 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..++.||||||||++||++++.+|++++|||||+|||..++.++.+.|+++.. + .+|+.++|+..++.+.+|++++|
T Consensus 143 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l 219 (251)
T PRK14270 143 KSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFF 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 220 LMGDLIEFNKTEKIF 234 (251)
T ss_pred ECCeEEEeCCHHHHh
Confidence 999999999998764
No 405
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.10 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=178.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.++++|+++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999988874 135899999999999999999999999999999999976531 1369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ...++.++|++|+..+++ .|+.||+.+....... .+..+.++.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567999999988877 8999999876433211 12233345678899999985432222222 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecC-
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1084 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~g- 1084 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 8999999999999999999999999999999999999999999999865 4899999999986 578899999999863
Q ss_pred ---cEEEEecCC
Q 000612 1085 ---GQEIYVGPL 1093 (1391)
Q Consensus 1085 ---G~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 406
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.2e-32 Score=361.94 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=107.8
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000612 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1027 (1391)
Q Consensus 952 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrqRl~iA~~L~---~~p~ 1027 (1391)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999887542211111223344455 57889999775 4554 3579999999999999998 5999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000612 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1391)
Q Consensus 1028 illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~-----~gG~~~y~G~~ 1093 (1391)
+++|||||+|||+.+...+++.|+++.++|.|||+++|++.. + +.+|++++|. .||+++..|++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 999999999999999999999999998889999999999863 4 8999999995 36899999986
No 407
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=313.38 Aligned_cols=191 Identities=25% Similarity=0.385 Sum_probs=162.7
Q ss_pred ccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCcH
Q 000612 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
|+|+++++ |+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999865 458999999976531 1235679999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
.|++.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1233345678899999998766654 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 46778999999985 7887765
No 408
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.8e-34 Score=335.74 Aligned_cols=194 Identities=23% Similarity=0.376 Sum_probs=168.7
Q ss_pred ccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCcH
Q 000612 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999875 458999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
+||+.|+.... ...+.++.++++++.++|.+..+.. +..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRL-----PGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 1233445688999999998877776 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|+.++..+++.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 57788999999986 799999885
No 409
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.7e-32 Score=352.62 Aligned_cols=122 Identities=24% Similarity=0.311 Sum_probs=101.5
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEEE
Q 000612 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1031 (1391)
Q Consensus 956 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p---~illL 1031 (1391)
+||.|++.|...+. . .....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 68888888764332 1 1124578899999753 3443 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000612 1032 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1391)
Q Consensus 1032 DEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~-----~gG~~~y~G~~ 1093 (1391)
||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346899999994 57999999985
No 410
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.71 Aligned_cols=211 Identities=21% Similarity=0.307 Sum_probs=167.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 49999999999999999999999999999999999986 3111289999999887432 1245799999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+||+||+.++.+..+.... .+....++++++.+|+........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL-K 143 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 999999999876432110000 001123566788888754211111 1
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..+..|||||||||+||++|+.+|++++|||||+|||..++.++.+.|+++.+ + ++||.++|+..++.++||++++|
T Consensus 144 ~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l 220 (252)
T PRK14256 144 SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFF 220 (252)
T ss_pred CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998753 3 45666788889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++..|+.+++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 221 YMGDLVECGETKKIF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 411
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=320.93 Aligned_cols=216 Identities=21% Similarity=0.286 Sum_probs=177.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC-e--EEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899988774 235899999999999999999999999999999999976422 1 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+..+.++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999988887 899999987654332 1122333456788899998843 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 468999999999999999999999999999999999999999999999865 699999999987 5788999999997
Q ss_pred c----CcEEEEecCC
Q 000612 1083 R----GGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~----gG~~~y~G~~ 1093 (1391)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999986
No 412
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=334.99 Aligned_cols=190 Identities=23% Similarity=0.379 Sum_probs=166.9
Q ss_pred ccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCcH
Q 000612 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 886 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999875 458999999977532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
+||+.|+.. ...++.++++++.++|.+..+.. +..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 11234578999999998877776 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|+.++..+++.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999765 899999999986 58889999999985 799999986
No 413
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.31 Aligned_cols=219 Identities=22% Similarity=0.246 Sum_probs=175.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367888887763 245899999999999999999999999999999999976421 3579999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000612 932 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1391)
Q Consensus 932 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1391)
.+... ...++.++|++|++.+++ .||.||+.+...... ....+..++.+.++++.+++.+........ .+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87531 234567999999988887 899999987643221 112233345677888888875421111111 1467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999965 699999999986 57888999999985 799
Q ss_pred EEecCC
Q 000612 1088 IYVGPL 1093 (1391)
Q Consensus 1088 ~y~G~~ 1093 (1391)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 999875
No 414
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=318.74 Aligned_cols=208 Identities=19% Similarity=0.278 Sum_probs=166.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 16 QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 49999999999999999999999999999999999975 45 8999999998764322 357999999987776
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.||+||+.++...++.... .......++.+++.+||........ ++
T Consensus 93 -~tv~eni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 138 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQ 138 (246)
T ss_pred -ccHHHHhhhHHhhcCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cC
Confidence 6999999886433211000 0001123566788888853211111 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
..+.|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++. .+ ++|+.++|+..++.+.+|++++|+
T Consensus 139 ~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~ 215 (246)
T PRK14269 139 NALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFH 215 (246)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEE
Confidence 456799999999999999999999999999999999999999999999864 33 456667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~g~~~~~~ 229 (246)
T PRK14269 216 LGELIEFGESKEFF 229 (246)
T ss_pred CCEEEEECCHHHHH
Confidence 99999999988764
No 415
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.5e-34 Score=394.16 Aligned_cols=259 Identities=19% Similarity=0.231 Sum_probs=195.9
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCC-cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1391)
.+.....+||+.++.+.++|.-. ..+ .......-| ..+|+|+||++.|..
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~~--~~~-~~~~~~~~p~~g~I~f~nVsf~Y~~-------------------------- 1246 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEATA--IIE-NNRPVSGWPSRGSIKFEDVHLRYRP-------------------------- 1246 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCccccc--ccc-CCCCCCCCCCCCcEEEEEEEEEECC--------------------------
Confidence 45677888999998876655210 000 000000112 357999999999842
Q ss_pred hcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000612 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1391)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1391)
...++|+|+|++|+|||.++|+||+|||||||+++|.|.++|+ +|+|.+||.++++... ++.++||+|
T Consensus 1247 ------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~IdG~di~~i~~~~lR~~i~iVpQ 1317 (1495)
T PLN03232 1247 ------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELE---KGRIMIDDCDVAKFGLTDLRRVLSIIPQ 1317 (1495)
T ss_pred ------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCC---CceEEECCEEhhhCCHHHHHhhcEEECC
Confidence 1134999999999999999999999999999999999999998 9999999999887654 478999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 234 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
++.+|. .||||||.++.. ...+.+.++.++. +. ++.+ -.+++..|
T Consensus 1318 dp~LF~-gTIr~NL~~~~~-----~sdeei~~al~~a---~l------------------------~~~I--~~lp~GLd 1362 (1495)
T PLN03232 1318 SPVLFS-GTVRFNIDPFSE-----HNDADLWEALERA---HI------------------------KDVI--DRNPFGLD 1362 (1495)
T ss_pred CCeeeC-ccHHHHcCCCCC-----CCHHHHHHHHHHc---CC------------------------HHHH--HhCcCCCC
Confidence 887775 699999986421 1112222222111 10 1111 23677789
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
|.||+.+. +||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++| +|++.|.. ++...||
T Consensus 1363 t~v~e~G~-~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~~T-vI~IAHRl-~ti~~~D 1437 (1495)
T PLN03232 1363 AEVSEGGE-NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KSCT-MLVIAHRL-NTIIDCD 1437 (1495)
T ss_pred ceecCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCE-EEEEeCCH-HHHHhCC
Confidence 99998654 599999999999999999999999999999999999999999999752 3445 44566655 5566699
Q ss_pred eEEEEcCCeEEEecChhHHHH
Q 000612 394 DIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|++|++|++++.|+++++++
T Consensus 1438 rIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1438 KILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred EEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999874
No 416
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2e-33 Score=319.31 Aligned_cols=205 Identities=23% Similarity=0.269 Sum_probs=165.5
Q ss_pred eeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCceeEEEEcCccCCCcCc-cceEEEEcCCCC--CCC
Q 000612 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDN--HIG 239 (1391)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1391)
+|+|+|+++++||+++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++||+|++. +.+
T Consensus 18 il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~ 94 (254)
T PRK10418 18 LVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNP 94 (254)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccCc
Confidence 89999999999999999999999999999999999988 6 9999999988753322 256999999874 446
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
..|+.+++.+.++..+... ....++++++.+||.+.. +. -+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~l~~~~l~~~~-~~-~~~ 136 (254)
T PRK10418 95 LHTMHTHARETCLALGKPA------------------------------------DDATLTAALEAVGLENAA-RV-LKL 136 (254)
T ss_pred cccHHHHHHHHHHHcCCCh------------------------------------HHHHHHHHHHHcCCCChh-hh-hhc
Confidence 6899999866432211100 012356678889987521 11 123
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.++.|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++. .+++|+.++|+..++.+.+|++++|+
T Consensus 137 ~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~ 215 (254)
T PRK10418 137 YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMS 215 (254)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEE
Confidence 44579999999999999999999999999999999999999999999987643 34556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (254)
T PRK10418 216 HGRIVEQGDVETLF 229 (254)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988764
No 417
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.22 Aligned_cols=210 Identities=20% Similarity=0.320 Sum_probs=165.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 48999999999999999999999999999999999987 3212389999999987421 1235799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+. ||+||+.|..+..+.... ++....++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999886433211000 001123456677888753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
...+.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++. .+ .++|.++|+..++.+.+|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EK-YTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEEcCHHHHHHhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 34 45566788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998764
No 418
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.8e-34 Score=363.16 Aligned_cols=210 Identities=24% Similarity=0.401 Sum_probs=176.7
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++|+|+++.+. +++.+|+|+|++|+||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 4699999987553 1246899999999999999999999999999999999987 3 48999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 457788999999998876 59999998851 23333 346677777776543 36777765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
| .+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5899999999985 4678999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 799999874
No 419
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=321.50 Aligned_cols=220 Identities=22% Similarity=0.248 Sum_probs=177.5
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEEEEEEc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 930 (1391)
..++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3588999998874 13589999999999999999999999999999999998642 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+......+. .+
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Cc
Confidence 987642 2345679999999888875 99999987654321 111223345678889998886421111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ +.|||+++|+++ ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999975 799999999986 47788999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
+++..|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 99999885
No 420
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=324.11 Aligned_cols=216 Identities=24% Similarity=0.303 Sum_probs=180.1
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++.. ....+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47889998887421 12358999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999998764322 123344445688999999998877665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 9999999999864 4 46999999986 78999
Q ss_pred ecCC
Q 000612 1090 VGPL 1093 (1391)
Q Consensus 1090 ~G~~ 1093 (1391)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 9875
No 421
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=317.90 Aligned_cols=216 Identities=23% Similarity=0.277 Sum_probs=174.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCe---EEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 931 (1391)
-+.++|+++.++ ++.+|+|+|+.|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 367788887763 2469999999999999999999999999999999999864322 379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.+++.++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 2345679999999998898999999987643221 1122333455667777777642 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999986 5777899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 799999885
No 422
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1e-33 Score=316.90 Aligned_cols=201 Identities=24% Similarity=0.315 Sum_probs=166.5
Q ss_pred EeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC--eEEEEEEEcCccCCcccc-cceEEEeccCCC--CCCCCc
Q 000612 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 957 (1391)
Q Consensus 883 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 957 (1391)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 479999999999999999999999999999999986520 158999999987654322 357999999974 556789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000612 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP---LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1391)
Q Consensus 958 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEP 1034 (1391)
+.|++.+....... ..+..++.++++++.+++.+ ..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775432211 12333456889999999973 34443 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEecCC
Q 000612 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1035 TsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G~~ 1093 (1391)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 57788999999985 799998875
No 423
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=8.2e-33 Score=312.30 Aligned_cols=173 Identities=24% Similarity=0.296 Sum_probs=135.5
Q ss_pred eeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcHHHHHH
Q 000612 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1391)
Q Consensus 884 L~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~ 963 (1391)
|.==.+.|..||+++++||||-||||+.++|+|..+ +.+|. .. .-.++|=||.-.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 444457888999999999999999999999999765 34554 11 123677788655456789999775
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000612 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1391)
Q Consensus 964 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~ 1043 (1391)
-...-+... .-+..|+++-++|.++.|..+ .+|||||.|||+||.+|.+++++.+||||++.||++.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432211111 123467888999999988874 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1044 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1044 ~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
..+-++||+... +++|.+++-||... +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999875 48999999999753 444668888775
No 424
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=318.63 Aligned_cols=210 Identities=21% Similarity=0.343 Sum_probs=165.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 4899999999999999999999999999999999998741 01289999999876532 1245799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +||+||+.++....+.... + .....+++.++.+|+....+.. .+
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKSK-H--------------------------------KLDRIVEESLKKAALWDEVKSE-LN 141 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCchhHHH-Hh
Confidence 7 8999999886532211000 0 0112245567777775321111 23
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+.++.||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++. .+ ++|+.++|+..++.+++|++++|
T Consensus 142 ~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tili~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14262 142 KPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS--EN-YTIVIVTHNIGQAIRIADYIAFM 218 (250)
T ss_pred CChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh--cC-cEEEEEeCCHHHHHHhCCEEEEE
Confidence 4556799999999999999999999999999999999999999999999874 23 45666788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 219 YRGELIEYGPTREIV 233 (250)
T ss_pred ECCEEEEecCHHHHH
Confidence 999999999988764
No 425
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.8e-34 Score=283.26 Aligned_cols=198 Identities=26% Similarity=0.391 Sum_probs=169.8
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc---c---cc-cceEEEeccCCC
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---E---TF-ARISGYCEQNDI 951 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~-~~~~gyv~Q~~~ 951 (1391)
+...||++|++.|++||.+||+|||||||||||-+|+|... +.+|+|.+.|.+... + .+ .+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 45679999999999999999999999999999999999876 458999999988643 1 22 367999999999
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000612 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1391)
Q Consensus 952 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illL 1031 (1391)
+.|++|..||+.....++..... ...+...+.++.+||.+-.+.. +..|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 99999999999998888764222 2233467789999998766654 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1032 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1032 DEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
||||-+||..+...|.+++-.+.+ .|.|.|++||||. +...|||.+-|.. |+++.
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 999999999999999999988864 5999999999985 6788999999986 67653
No 426
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.26 Aligned_cols=206 Identities=21% Similarity=0.313 Sum_probs=162.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 49999999999999999999999999999999999987 35 89999999876421 1235699999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+++ .||+||+.+++...+... + ....++.+++.+++....+..
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhh
Confidence 8777 599999998754322100 0 001234456666653211111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
-+..+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+||.++|+..++.++||++
T Consensus 148 -~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i 223 (269)
T PRK14259 148 -LNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRVSDMT 223 (269)
T ss_pred -hCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEE
Confidence 123456799999999999999999999999999999999999999999999873 23 45666888899999999999
Q ss_pred EEEcC-----------CeEEEecChhHHHH
Q 000612 396 ILLSD-----------GQIVYQGPRELVLE 414 (1391)
Q Consensus 396 ilL~~-----------G~iv~~G~~~~~~~ 414 (1391)
++|++ |++++.|+++++.+
T Consensus 224 ~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 224 AFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEeccccccccccccceEEEeCCHHHHHh
Confidence 99996 67899999988753
No 427
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.7e-33 Score=318.33 Aligned_cols=213 Identities=21% Similarity=0.282 Sum_probs=174.2
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC--eEEEEEEEcCc
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGY 932 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~ 932 (1391)
.++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578899988762 24899999999999999999999999999999999986531 16799999998
Q ss_pred cCCcccc-cceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCC
Q 000612 933 PKKQETF-ARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP---LRQSLVGLPGVS 1006 (1391)
Q Consensus 933 ~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~ 1006 (1391)
++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..+.. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 7643322 357999999974 4466799998876433221 111 2256788999999976 23433 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 46788999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 99999885
No 428
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=317.96 Aligned_cols=210 Identities=21% Similarity=0.348 Sum_probs=164.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 49999999999999999999999999999999999853 4212389999999887421 1245799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +||+||+.++....+.... + .....++++++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999886533211000 0 01123455677777643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+.++.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ + .+|+.++|+.+++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998742 3 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998764
No 429
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=351.34 Aligned_cols=218 Identities=26% Similarity=0.331 Sum_probs=182.9
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|++++++ ++.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 77889888773 2469999999999999999999999999999999999875 35899999998753
Q ss_pred cc----cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 936 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..++.++|++|++.+++.+||+|++.++...+.. ...+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245699999999888999999999886432211 11223334456889999999988777654 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|.|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 799999
Q ss_pred cCCCC
Q 000612 1091 GPLGR 1095 (1391)
Q Consensus 1091 G~~~~ 1095 (1391)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98753
No 430
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.1e-33 Score=312.43 Aligned_cols=211 Identities=23% Similarity=0.339 Sum_probs=175.2
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.+... .+.+.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888776310 012569999999999999999999999999999999999865 45899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000612 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1009 (1391)
.. ..++.++|++|++.+++..|+.||+.+...... ....++..+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 21 245679999999988888999999998654321 123444456788999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 4588999999986 553
No 431
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.44 Aligned_cols=215 Identities=24% Similarity=0.257 Sum_probs=174.9
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc-
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1391)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478899988764 1358999999999999999999999999999999999865 457999999986
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000612 934 ----KKQE---T----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1391)
Q Consensus 934 ----~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 999 (1391)
+... . .++.++|++|++. +.+.+|+.|++.+...... .....+.++.+.++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346999999974 5677899999876432111 1122234556788999999963 44443
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeE
Q 000612 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1391)
Q Consensus 1000 vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~ 1078 (1391)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+++.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4679999999999999999999999999999999999999999999998764 899999999986 466789999
Q ss_pred EEEecCcEEEEecCC
Q 000612 1079 FLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1079 ~ll~~gG~~~y~G~~ 1093 (1391)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999875
No 432
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4e-32 Score=351.05 Aligned_cols=213 Identities=27% Similarity=0.411 Sum_probs=178.1
Q ss_pred CceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCc
Q 000612 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1391)
Q Consensus 853 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1391)
...++++|++|+++. +++.+|+|+|++++|||++||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 346999999999852 22458999999999999999999999999999999999876 45899999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccC
Q 000612 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGL 1002 (1391)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~ 1002 (1391)
++++ ..+++.++||+|++.+++ .|++||+.++. ++.+. +.++++++..++.+. .|+.+|.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8654 456788999999988776 69999997631 22222 345667777776543 3566665
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
. ..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +|+|+|+++|+++ ..+.+|++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 46899999999999999999999999999999999999999999999984 5899999999986 356799999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 6 799999985
No 433
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=317.13 Aligned_cols=219 Identities=20% Similarity=0.238 Sum_probs=174.8
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.++++|+++.+. ++.+|+|+|++|++|++++|+|+||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367888888764 235999999999999999999999999999999999976531 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ..+++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+..+..... .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 87532 1346779999999988875 999999987543311 11222344577788888875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 899999999999999999999999999999999999999999999985 5899999999986 47788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999885
No 434
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=317.43 Aligned_cols=210 Identities=22% Similarity=0.355 Sum_probs=163.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 489999999999999999999999999999999998763 111389999999887531 1245799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +||+||+.++....+.... .+....++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999986543221000 001123455566777642111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..+..|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++. .+ .+|+.++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KD-YTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999873 34 45566788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 435
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=319.03 Aligned_cols=207 Identities=18% Similarity=0.272 Sum_probs=162.3
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCcC-----ccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++.... .++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 49999999999999999999999999999999999864 45 899999998875321 235799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+++. ||+||+.++....+.... . ..+..+...++.+++.......
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERRK-----S----------------------------VLDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCcH-----H----------------------------HHHHHHHHHHHHcCCCcchHHH
Confidence 77774 999999876432110000 0 0011234456677764211111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
-++.+..||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++.+ + ++|+.++|+..++.+++|++
T Consensus 158 -~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 -LHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred -HhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1234557999999999999999999999999999999999999999999998742 3 45666788888999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 436
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.8e-34 Score=361.92 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=191.1
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCCCCC-cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1391)
.++.+..++|+.+.++.+++. ....+....+.+ ...++++||++.++..
T Consensus 301 ~~~~~~~~~ri~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------------------- 350 (576)
T TIGR02204 301 LQRAAGAAERLIELLQAEPDI-----KAPAHPKTLPVPLRGEIEFEQVNFAYPAR------------------------- 350 (576)
T ss_pred HHHHHHHHHHHHHHhCCCCcC-----CCCCCCccCCcCCCceEEEEEEEEECCCC-------------------------
Confidence 456777888888877654320 000000011112 2359999999987420
Q ss_pred hcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000612 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1391)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1391)
.++.+|+|+|++++|||.++|+||||||||||+|+|+|+++|. +|+|.+||.++++..+ ++.++||+|
T Consensus 351 ------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 351 ------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred ------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 1135999999999999999999999999999999999999998 9999999999876654 367999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000612 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1391)
Q Consensus 234 ~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1391)
++. +.+.|++|||.++... ...+.+.++.+. .+ ..+.++ .+++..|
T Consensus 422 ~~~-lf~~Ti~~Ni~~~~~~----~~~~~~~~~l~~---~~------------------------l~~~i~--~l~~gl~ 467 (576)
T TIGR02204 422 DPV-LFAASVMENIRYGRPD----ATDEEVEAAARA---AH------------------------AHEFIS--ALPEGYD 467 (576)
T ss_pred CCc-cccccHHHHHhcCCCC----CCHHHHHHHHHH---cC------------------------cHHHHH--hCCCCCC
Confidence 765 5567999999875311 111111111111 00 111222 2566678
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcC
Q 000612 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1391)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1391)
|.+|+.+ ..||||||||++||||++++|++++||||||+||..++..+.+.|+++. .++|+|+ ++|.. +....+|
T Consensus 468 t~i~~~g-~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~--~~~t~Ii-itH~~-~~~~~~d 542 (576)
T TIGR02204 468 TYLGERG-VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM--KGRTTLI-IAHRL-ATVLKAD 542 (576)
T ss_pred ceeCCCC-CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCC
Confidence 9998764 4699999999999999999999999999999999999999999999863 3455555 55554 5567899
Q ss_pred eEEEEcCCeEEEecChhHHHH
Q 000612 394 DIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|++|++|+++..|+++++.+
T Consensus 543 ~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 543 RIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred EEEEEECCEEEeeecHHHHHH
Confidence 999999999999999998754
No 437
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=317.61 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=177.1
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC--C-eEEEEEEEc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITIS 930 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 930 (1391)
..+..+++++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 3466777766652 35699999999999999999999999999999999998642 1 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000612 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1391)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 1005 (1391)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . ....++.++++++.++|.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987532 23456799999998776 5999999988754332 1 122345688899999986533222222 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe---
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1082 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~--- 1082 (1391)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6899999999999999999999999999999999999999999999985 4799999999986 4778899999996
Q ss_pred ----cCcEEEEecCC
Q 000612 1083 ----RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ----~gG~~~y~G~~ 1093 (1391)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46899999985
No 438
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=317.51 Aligned_cols=219 Identities=24% Similarity=0.252 Sum_probs=175.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988764 246999999999999999999999999999999999974321 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+........ .+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHD-SAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhc-Chh
Confidence 87642 2345679999999888874 999999987544321 12233345678888888875321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999875 689999999986 47788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9999885
No 439
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=351.91 Aligned_cols=218 Identities=25% Similarity=0.302 Sum_probs=182.0
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|++++++ ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 378889988773 2469999999999999999999999999999999999875 3589999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCcHHHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLR----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 935 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
... ..++.+||++|++.+++.+||+|++.++.... .....+.++.++.++++++.++|.+..+..+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 431 12346999999998889999999998753211 0000122344566889999999988777664 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
+|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. .+.+.+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999986 47778999999985 79
Q ss_pred EEEecCCC
Q 000612 1087 EIYVGPLG 1094 (1391)
Q Consensus 1087 ~~y~G~~~ 1094 (1391)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99999874
No 440
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.20 Aligned_cols=212 Identities=29% Similarity=0.395 Sum_probs=168.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCceeEEEEcCccCCCcCc---cceEEEEcCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT-----LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNH 237 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 237 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++..
T Consensus 15 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~ 94 (272)
T PRK13547 15 AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQP 94 (272)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCC
Confidence 4999999999999999999999999999999999999874 1137999999988754332 3468999998776
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000612 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1391)
Q Consensus 238 ~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1391)
++.+||+||+.++...... ..... ..+....++.+++.+||++..++.
T Consensus 95 ~~~~tv~e~l~~~~~~~~~--~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~-- 142 (272)
T PRK13547 95 AFAFSAREIVLLGRYPHAR--RAGAL----------------------------THRDGEIAWQALALAGATALVGRD-- 142 (272)
T ss_pred CCCCcHHHHHhhccccccc--ccccC----------------------------CHHHHHHHHHHHHHcCcHhhhcCC--
Confidence 6779999999875311000 00000 000112456788899997655543
Q ss_pred ccccccCChhhhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhH
Q 000612 318 DEMIRGISGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1391)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~---------~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~ 388 (1391)
+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+ ..+++|+.++|+..++
T Consensus 143 ---~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tviiisH~~~~~ 218 (272)
T PRK13547 143 ---VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLAR-DWNLGVLAIVHDPNLA 218 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHH
Confidence 4569999999999999999 59999999999999999999999999998754 3244566678888899
Q ss_pred HhhcCeEEEEcCCeEEEecChhHHH
Q 000612 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
.+++|++++|++|++++.|+.+++.
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999987763
No 441
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.3e-33 Score=317.77 Aligned_cols=206 Identities=27% Similarity=0.420 Sum_probs=158.6
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 241 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1391)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 34899999999999999999999999999999999999998 9999999987654322 35699999987665 57
Q ss_pred CHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc--CCccccccccccc
Q 000612 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLDVCADTMVGDE 319 (1391)
Q Consensus 242 TVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 319 (1391)
||+||+.+... . ...+...+..+ . ...+..++.+ |++...+ .
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~~~~---~------------------------~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIEAAK---L------------------------AGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHHHHH---H------------------------cCcHHHHHhCcccccchhh-----c
Confidence 99999987532 1 11111111000 0 0112334444 4433222 3
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++. .+. +|+.++|+..++ +.+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~-tiii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGR-TVIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCC-EEEEEeCCHHHH-HhCCEEEEEE
Confidence 456799999999999999999999999999999999999999999999874 344 455567777777 4699999999
Q ss_pred CCeEEEecChhHHHH
Q 000612 400 DGQIVYQGPRELVLE 414 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1391)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887653
No 442
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=322.07 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=174.7
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--C-CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1391)
.+.++|+++.++ ...+|+|+|++|++||+++|+|+|||||||||++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578999988774 1358999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1002 (1391)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999887774 999999986543211 12223345677888888874 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 689999999986 4778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 799999885
No 443
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=320.07 Aligned_cols=215 Identities=20% Similarity=0.253 Sum_probs=174.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--C-CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1391)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478999988774 2359999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1345679999999888774 99999987643221 1112233455778888888852 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999986 4778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 799999885
No 444
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=319.59 Aligned_cols=210 Identities=25% Similarity=0.330 Sum_probs=167.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCcC----ccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV----PQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++||+++|+||||||||||+++|+|+++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 35 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~ 114 (276)
T PRK14271 35 TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP 114 (276)
T ss_pred EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC
Confidence 4999999999999999999999999999999999998751 012899999998875431 2457999999887777
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
+||+||+.++...... ... .+....++.+++.+||.+..++.. +.
T Consensus 115 -~tv~eni~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~~ 159 (276)
T PRK14271 115 -MSIMDNVLAGVRAHKL-VPR--------------------------------KEFRGVAQARLTEVGLWDAVKDRL-SD 159 (276)
T ss_pred -ccHHHHHHHHHHhccC-CCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-hC
Confidence 8999999876432110 000 001123456678888865332222 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
.++.|||||||||+|||+|+.+|++++|||||+|||..+...+.+.|+++.. + .+||.++|+..++.+.+|++++|+
T Consensus 160 ~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~ 236 (276)
T PRK14271 160 SPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFF 236 (276)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999998743 3 466668888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000612 400 DGQIVYQGPRELVL 413 (1391)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1391)
+|++++.|+++++.
T Consensus 237 ~G~i~~~g~~~~~~ 250 (276)
T PRK14271 237 DGRLVEEGPTEQLF 250 (276)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999998874
No 445
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=319.26 Aligned_cols=219 Identities=23% Similarity=0.285 Sum_probs=178.0
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899998874 24699999999999999999999999999999999997642 13589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000612 932 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1391)
Q Consensus 932 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1007 (1391)
.++.. ...++.++|++|++.+++ .|++||+.+...... ..+.++.++.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87542 234567999999988777 899999987643221 12333444556788999998653221111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEE
Q 000612 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1391)
Q Consensus 1008 lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~ 1087 (1391)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57788999999985 799
Q ss_pred EEecCC
Q 000612 1088 IYVGPL 1093 (1391)
Q Consensus 1088 ~y~G~~ 1093 (1391)
++.|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 446
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.08 Aligned_cols=218 Identities=22% Similarity=0.391 Sum_probs=174.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578899988773 12468999999999999999999999999999999999865 4589999999876
Q ss_pred CcccccceEEEeccCCCCC--CCCcHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000612 935 KQETFARISGYCEQNDIHS--PFVTIYESLLFSAWLRL-SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~--~~lTv~e~l~f~a~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1011 (1391)
.....++.++|++|++.+. ...+++|++.++..... .........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234699999997542 23478888765321100 001111223445788999999988777654 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1012 qrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999776 4 7999999
Q ss_pred CCC
Q 000612 1092 PLG 1094 (1391)
Q Consensus 1092 ~~~ 1094 (1391)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 863
No 447
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3e-33 Score=309.55 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=171.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478899987763 2358999999999999999999999999999999999875 4579999999876
Q ss_pred CcccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 935 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
.....++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.++|.+..+..+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999888888999999987654321 1 12244678899999987776653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
|++||++++.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999987 5888999999886
No 448
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=315.93 Aligned_cols=207 Identities=23% Similarity=0.330 Sum_probs=163.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14272 18 QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPF 97 (252)
T ss_pred EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccC
Confidence 49999999999999999999999999999999999987631 1379999999887531 1235699999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1391)
+.+|++||+.++....+... .+. ....++..++.+++. +..+
T Consensus 98 ~~~t~~enl~~~~~~~~~~~-~~~--------------------------------~~~~~~~~l~~~~l~~~l~~~~~- 143 (252)
T PRK14272 98 PTMSVFDNVVAGLKLAGIRD-RDH--------------------------------LMEVAERSLRGAALWDEVKDRLK- 143 (252)
T ss_pred cCCCHHHHHHHHHHhcCCCC-HHH--------------------------------HHHHHHHHHHHcCcchhhhhhhc-
Confidence 99999999987643221100 000 011233344555543 2223
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
..++.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++. .+ ++|+.++|+..++.+.+|+
T Consensus 144 ----~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~ 216 (252)
T PRK14272 144 ----TPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--KV-TTIIIVTHNMHQAARVSDT 216 (252)
T ss_pred ----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCE
Confidence 3345699999999999999999999999999999999999999999999874 23 5566678888899999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000612 395 IILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1391)
+++|++|++++.|+++++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 217 TSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 449
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=315.15 Aligned_cols=219 Identities=24% Similarity=0.306 Sum_probs=173.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--CC-eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1391)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 377889988764 2468999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.+.+.++.+++.......... .+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHE-SAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhc-Ccc
Confidence 87531 234567999999988877 6999999886543321 11222234567788888764211111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 589999999986 57788999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 9999875
No 450
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=315.68 Aligned_cols=211 Identities=21% Similarity=0.324 Sum_probs=165.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|..+ |+...+|+|+++|.++.... .++.++|++|++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 98 (251)
T PRK14244 19 QILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPF 98 (251)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccc
Confidence 59999999999999999999999999999999999976 21112899999998764321 245799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+. ||+||+.+.....+..... .+....++++++.+||.+...+.+ +
T Consensus 99 ~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (251)
T PRK14244 99 PK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL-K 144 (251)
T ss_pred cC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 75 9999998764322110000 001123566788889865322222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..++.|||||||||+|||+|+.+|++++|||||+|||..+...+.+.|+++. .+ .+|+.++|+..++.+.+|++++|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 221 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAFF 221 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999863 34 55666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 222 QSGRIVEYNTTQEIF 236 (251)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 451
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=316.14 Aligned_cols=210 Identities=20% Similarity=0.320 Sum_probs=163.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 49999999999999999999999999999999999986 2111289999999876431 1245699999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ .||+||+.++....+.... + .....++++++.+|+....... -+
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~-~~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDN-LD 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHH-hc
Confidence 5 7999999876432211000 0 0112345567778874211000 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
.....||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--HQ-YTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--cC-CeEEEEECCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999863 23 55666888888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 452
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=315.79 Aligned_cols=215 Identities=24% Similarity=0.320 Sum_probs=174.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC--C-eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1391)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478899988774 23699999999999999999999999999999999997641 1 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 124567999999988776 7999999876432211 122233456788899998842 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 468999999999999999999999999999999999999999999999854 799999999986 4778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 453
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.7e-33 Score=307.74 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=164.4
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45677777663 2468999999999999999999999999999999999876 45799999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000612 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1391)
Q Consensus 936 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1013 (1391)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.++|.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345679999999988888999999988654321 1 1234578899999998777665 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEE
Q 000612 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1391)
Q Consensus 1014 qRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll 1081 (1391)
||++||++|+++|++|+|||||+|||+.+...+++.|+++.++|.|||+++|+++. +...-+|++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~-i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLP-VASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhh-hccCCceEEec
Confidence 99999999999999999999999999999999999999987778999999999863 43433455554
No 454
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=316.33 Aligned_cols=209 Identities=22% Similarity=0.326 Sum_probs=163.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCC-c---CccceEEEEcCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDE-F---VPQRTAAYISQHDNHIG 239 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~~ 239 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|..+++. ..+|+|.++|.++.. . ..++.++|++|++.+++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 96 (249)
T PRK14253 17 QALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPFP 96 (249)
T ss_pred eeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcCc
Confidence 49999999999999999999999999999999999987520 128999999987642 1 12357999999988787
Q ss_pred CCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000612 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1391)
Q Consensus 240 ~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1391)
.||+||+.++....+.... + .....+++.++.+|+.+...... +.
T Consensus 97 -~tv~~~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~~~~~~l~~~~~~~~-~~ 141 (249)
T PRK14253 97 -MSIYENVAYGLRAQGIKDK-K--------------------------------VLDEVVERSLRGAALWDEVKDRL-KS 141 (249)
T ss_pred -ccHHHHHHhHHHhcCCCch-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-hc
Confidence 8999999876432211000 0 01122445566667643211111 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc
Q 000612 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1391)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~ 399 (1391)
....|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+..++.+.+|++++|+
T Consensus 142 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l~ 218 (249)
T PRK14253 142 HAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFFL 218 (249)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999998743 3 456667888889999999999999
Q ss_pred CCeEEEecChhHH
Q 000612 400 DGQIVYQGPRELV 412 (1391)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1391)
+|++++.|+.+++
T Consensus 219 ~G~i~~~g~~~~~ 231 (249)
T PRK14253 219 MGELVEHDDTQVI 231 (249)
T ss_pred CCEEEEeCCHHHH
Confidence 9999999998765
No 455
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=319.96 Aligned_cols=207 Identities=21% Similarity=0.339 Sum_probs=162.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1391)
.+|+|+|++|++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 39999999999999999999999999999999999854 35 89999999876432 1245799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+++ .||+||+.++....+.... ......+.++++.+|+.......
T Consensus 130 ~l~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFP-KSIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCc-cCHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccchhhH
Confidence 7777 4999999986533211000 00112344566777763210000
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
-+..+..|||||||||+|||||+.+|++|+|||||+|||..+...+.+.|+++.. + .+||.++|+..++.+++|++
T Consensus 176 -~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~~~d~i 251 (286)
T PRK14275 176 -LDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASRVSDYT 251 (286)
T ss_pred -hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEE
Confidence 1234557999999999999999999999999999999999999999999998642 3 55666888899999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|+++..|+++++.
T Consensus 252 ~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 252 MFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 456
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.4e-34 Score=360.69 Aligned_cols=212 Identities=29% Similarity=0.446 Sum_probs=178.8
Q ss_pred CceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCc
Q 000612 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1391)
Q Consensus 853 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1391)
...++|+|++|.++. ++.+|+|+|++++|||++||+||||||||||++.|.|..+ +.+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCE
Confidence 356999999999862 3469999999999999999999999999999999999876 45899999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccC
Q 000612 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-------PLRQSLVGL 1002 (1391)
Q Consensus 933 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~ 1002 (1391)
++++ ..+++.++||+|++.++. -||+||+.++. ++.+++ .++++++..++. +-.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDE----EIEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHH----HHHHHHHHhChHHHHHhCcccccceecC
Confidence 8654 567889999999998887 89999999862 223333 345555554433 246888884
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
. ...||||||||++||||++++|+||+||||||+||+.++..|++.++++. +|+|+|+++|+++. ...+|+|++|+
T Consensus 462 ~-G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~IiVl~ 537 (567)
T COG1132 462 R-GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADRIIVLD 537 (567)
T ss_pred C-CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCEEEEEE
Confidence 3 56899999999999999999999999999999999999999999999886 57999999999963 45599999999
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |+++..|..
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 6 789999986
No 457
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=318.32 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=164.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998740 01289999999887531 1246799999998878
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+. ||+||+.+.....+.... + .....++++++.+|+.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR-R--------------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 999999876543221000 0 00122455677777753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
...+.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+.+|++++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566788889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 458
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.8e-33 Score=303.67 Aligned_cols=170 Identities=41% Similarity=0.664 Sum_probs=147.4
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1391)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998764333567999999988889999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
++||+.+..++ +
T Consensus 99 ~~~~i~~~~~~-----------------------------------------------------------~--------- 110 (194)
T cd03213 99 VRETLMFAAKL-----------------------------------------------------------R--------- 110 (194)
T ss_pred HHHHHHHHHHh-----------------------------------------------------------c---------
Confidence 99999764210 0
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCch-hHHhhcCeEEEEcCC
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAP-ETYDLFDDIILLSDG 401 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~-~~~~~~D~iilL~~G 401 (1391)
.||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++.. .+.|+|+ ++|+.. ++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998753 3445544 566654 788999999999999
Q ss_pred eEEEec
Q 000612 402 QIVYQG 407 (1391)
Q Consensus 402 ~iv~~G 407 (1391)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 459
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.3e-33 Score=307.46 Aligned_cols=195 Identities=27% Similarity=0.333 Sum_probs=165.3
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4577776653 2468999999999999999999999999999999999875 457999999987532
Q ss_pred --ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
..+++.++|++|++.+++.+|++|++.+.... . .++.++++++.+++.+..++. +..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHH
Confidence 23556799999998888899999999875311 1 134578899999998777665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEE
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll 1081 (1391)
|++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|+|+|+++|++. ++.+.+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999986 577888998876
No 460
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=314.85 Aligned_cols=210 Identities=19% Similarity=0.261 Sum_probs=164.8
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 97 (251)
T PRK14249 18 QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPF 97 (251)
T ss_pred eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccC
Confidence 49999999999999999999999999999999999998741 1259999999876432 1246799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+. ||+||+.++....+.... + +....+++.++.+||.+..... .+
T Consensus 98 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~-~~ 142 (251)
T PRK14249 98 PK-SIFDNVAFGPRMLGTTAQ-S--------------------------------RLDEVVEKSLRQAALWDEVKDN-LH 142 (251)
T ss_pred cC-cHHHHHhhHHHhcCCChh-h--------------------------------HHHHHHHHHHHHhCCchhhhhH-hh
Confidence 75 999999986543221000 0 0011234456666664321111 13
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+....|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+..++.+.+|++++|
T Consensus 143 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tilivsh~~~~~~~~~d~i~~l 219 (251)
T PRK14249 143 KSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--Q-NYTIAIVTHNMQQAARASDWTGFL 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHhhCCEEEEE
Confidence 4456799999999999999999999999999999999999999999999863 3 356666888999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 220 LTGDLVEYGRTGEIF 234 (251)
T ss_pred eCCeEEEeCCHHHHH
Confidence 999999999988764
No 461
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-33 Score=317.69 Aligned_cols=220 Identities=19% Similarity=0.222 Sum_probs=175.1
Q ss_pred CceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCC---eEEEEEEE
Q 000612 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITI 929 (1391)
Q Consensus 853 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i 929 (1391)
+..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..... +.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (274)
T PRK14265 18 HSVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLY 84 (274)
T ss_pred CceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEE
Confidence 34688999998774 236999999999999999999999999999999999975321 24799999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000612 930 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1391)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 1004 (1391)
+|.++.. ..+++.++|++|+..+++. ||.|++.+....+. .. ...++.++++++.+++.......... .
T Consensus 85 ~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~ 158 (274)
T PRK14265 85 RDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKE-K 158 (274)
T ss_pred CCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcC-C
Confidence 9987532 2345679999999887764 99999987643321 11 12234467778888874221111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe--
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-- 1082 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~-- 1082 (1391)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 159 ~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~ 236 (274)
T PRK14265 159 GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTE 236 (274)
T ss_pred cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecc
Confidence 467999999999999999999999999999999999999999999999965 799999999986 5778999999997
Q ss_pred ------cCcEEEEecCC
Q 000612 1083 ------RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ------~gG~~~y~G~~ 1093 (1391)
+.|++++.|+.
T Consensus 237 ~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 237 IDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccCceEEEeCCH
Confidence 25899999996
No 462
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.9e-33 Score=320.62 Aligned_cols=198 Identities=23% Similarity=0.232 Sum_probs=159.5
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|++|++||+++|+|||||||||||++|+|+++ . +|+|.++|.++..... ++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 38999999999999999999999999999999999997 5 8999999998765432 467999999988876 59
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCC-------ccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL-------DVCADTM 315 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~dt~ 315 (1391)
|+||+..... ...+.. .+.++.+|| +...|+.
T Consensus 93 v~~nl~~~~~-----~~~~~~------------------------------------~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDEEI------------------------------------WKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHHHH------------------------------------HHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 011111 112222333 3456677
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+++ ....||||||||++|||||+.+|+|++|||||++||+.+...+.+.|++.. . +++||+++|+...+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--A-DCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--C-CCEEEEEECCHHHHH-hCCEE
Confidence 766 456799999999999999999999999999999999999999999999752 3 455666777776665 59999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000612 396 ILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1391)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999865
No 463
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=5e-33 Score=318.18 Aligned_cols=224 Identities=25% Similarity=0.324 Sum_probs=178.7
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
+.++|+++.++... ..+. ..++.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67788887764200 0000 012569999999999999999999999999999999999865 46899999998654
Q ss_pred cc------cccceEEEeccCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000612 936 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1391)
Q Consensus 936 ~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 1006 (1391)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+..+.++++++.+++. +..+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 31 2356799999997 3567789999987643211 1123344455688999999996 455554 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 57778999999985 7
Q ss_pred EEEEecCCC
Q 000612 1086 QEIYVGPLG 1094 (1391)
Q Consensus 1086 ~~~y~G~~~ 1094 (1391)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999863
No 464
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=315.41 Aligned_cols=210 Identities=21% Similarity=0.306 Sum_probs=164.4
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 99 (253)
T PRK14261 20 HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPF 99 (253)
T ss_pred eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccC
Confidence 4999999999999999999999999999999999987531 11279999999987543 1235699999998887
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ .||+||+.|+.+..+.... .+....++++++.+++.+...+.. +
T Consensus 100 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 144 (253)
T PRK14261 100 P-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL-H 144 (253)
T ss_pred c-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-h
Confidence 7 4999999987543221000 001123445667777643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+..+.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.+ + .+|+.++|+..++.+.+|++++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~l 221 (253)
T PRK14261 145 DSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGFM 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998743 3 45666788889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 222 YLGKLIEFDKTTQIF 236 (253)
T ss_pred ECCEEEEcCCHHHHH
Confidence 999999999988763
No 465
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-33 Score=320.18 Aligned_cols=210 Identities=19% Similarity=0.283 Sum_probs=173.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.+.++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4788999988852 12358999999999999999999999999999999999874 369999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGL------PGV 1005 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 1005 (1391)
.. ..+++.++||+|++.+++ .|++||+.... ... ++.++++++.++|.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345678999999998887 49999995321 111 23467888899998766554321 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCc
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG 1085 (1391)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5799999999999999999999999999999999999999999999875 4899999999985 34 45999999985 7
Q ss_pred EEEEecCC
Q 000612 1086 QEIYVGPL 1093 (1391)
Q Consensus 1086 ~~~y~G~~ 1093 (1391)
+++++|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999986
No 466
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4e-33 Score=347.55 Aligned_cols=220 Identities=22% Similarity=0.337 Sum_probs=180.9
Q ss_pred eEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCC
Q 000612 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1391)
Q Consensus 856 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1391)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24699999999999999999999999999999999998653225899999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000612 936 QET----FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLS 1009 (1391)
Q Consensus 936 ~~~----~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lS 1009 (1391)
... .++.+||++|++.+++.+||.|++.+....+... ....++.+++++++++.++|.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 311 2356999999998889999999998864322111 122334456688999999997654 333 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1010 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 47788999999986 78999
Q ss_pred ecCCCC
Q 000612 1090 VGPLGR 1095 (1391)
Q Consensus 1090 ~G~~~~ 1095 (1391)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 998753
No 467
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9.9e-34 Score=388.90 Aligned_cols=257 Identities=16% Similarity=0.217 Sum_probs=196.0
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcCC--C-CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhH
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI--D-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1391)
.+....++||+.++.+.++|. ....+.... . .+..+|+|+||++.|...
T Consensus 1246 ~e~~~~s~eRi~~~~~~~~e~-----~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~----------------------- 1297 (1522)
T TIGR00957 1246 METNIVAVERLKEYSETEKEA-----PWQIQETAPPSGWPPRGRVEFRNYCLRYRED----------------------- 1297 (1522)
T ss_pred HHHHHHHHHHHHHHhcCCCCc-----cccccCCCCCCCCCCCCcEEEEEEEEEeCCC-----------------------
Confidence 567888999999998766541 000011011 1 134679999999998421
Q ss_pred hhhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEE
Q 000612 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1391)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1391)
..++|+|||++|+|||.++|+|++|||||||+++|.|+++|+ +|+|.+||.++++... ++.++||
T Consensus 1298 ---------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~---~G~I~IdG~dI~~i~~~~LR~~i~iV 1365 (1522)
T TIGR00957 1298 ---------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESA---EGEIIIDGLNIAKIGLHDLRFKITII 1365 (1522)
T ss_pred ---------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCC---CCeEEECCEEccccCHHHHHhcCeEE
Confidence 124999999999999999999999999999999999999998 9999999999987764 4789999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000612 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1391)
Q Consensus 232 ~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1391)
+|++.+|. .||||||..... ...+.+.++.+. .+. ++.+ -.+++.
T Consensus 1366 pQdp~LF~-gTIr~NLdp~~~-----~sdeei~~al~~---a~l------------------------~~~I--~~lp~G 1410 (1522)
T TIGR00957 1366 PQDPVLFS-GSLRMNLDPFSQ-----YSDEEVWWALEL---AHL------------------------KTFV--SALPDK 1410 (1522)
T ss_pred CCCCcccC-ccHHHHcCcccC-----CCHHHHHHHHHH---cCc------------------------HHHH--hhCccC
Confidence 99887775 599999972111 111222222111 110 1111 135677
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhh
Q 000612 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1391)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1391)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++|+ |++.|.. ++...
T Consensus 1411 Ldt~v~e~G~-~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~--~~~Tv-I~IAHRl-~ti~~ 1485 (1522)
T TIGR00957 1411 LDHECAEGGE-NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF--EDCTV-LTIAHRL-NTIMD 1485 (1522)
T ss_pred CCceecCCCC-cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCEE-EEEecCH-HHHHh
Confidence 8999998654 699999999999999999999999999999999999999999998742 34454 4466654 66677
Q ss_pred cCeEEEEcCCeEEEecChhHHHH
Q 000612 392 FDDIILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1391)
+|+|++|++|+|+++|+++++++
T Consensus 1486 ~DrIlVld~G~IvE~G~~~eLl~ 1508 (1522)
T TIGR00957 1486 YTRVIVLDKGEVAEFGAPSNLLQ 1508 (1522)
T ss_pred CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999875
No 468
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-33 Score=279.56 Aligned_cols=202 Identities=28% Similarity=0.393 Sum_probs=171.0
Q ss_pred CccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEc
Q 000612 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYIS 232 (1391)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 232 (1391)
....+..||++|++.|++||.++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3446788999999999999999999999999999999999999998 9999999999866542 26899999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000612 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1391)
Q Consensus 233 Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1391)
|...++|+||..||+...+.+++.+.+. ........|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~----------------------------------~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSAD----------------------------------SRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCcccc----------------------------------HHHHHHHHHHHhCccccc
Confidence 9999999999999999888776532210 112345678899998766
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhc
Q 000612 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1391)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1391)
+- ++.+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.+ ..+++++.++|+ +.+..-|
T Consensus 141 ~H-----yP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 TH-----YPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHD-PQLAARC 213 (228)
T ss_pred cc-----CccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCC-HHHHHhh
Confidence 53 4567999999999999999999999999999999999999999999977765 456666667776 5677889
Q ss_pred CeEEEEcCCeEEE
Q 000612 393 DDIILLSDGQIVY 405 (1391)
Q Consensus 393 D~iilL~~G~iv~ 405 (1391)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 469
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-33 Score=315.86 Aligned_cols=212 Identities=22% Similarity=0.289 Sum_probs=167.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++++. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 48999999999999999999999999999999999998741 2479999999876421 1235699999988777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +||+||+.+.....+.... .+....+..+++.+|+.+..+... +
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 145 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRPK---------------------------------LEIDDIVESALKDADLWDEIKHKI-H 145 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchhhhHh-c
Confidence 7 8999999876432211000 001123456778888754222111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
+.+..||||||||++|||+|+.+|++++|||||+|||..+...+.+.|++++... +++|+.++|+..++.+++|+|++|
T Consensus 146 ~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~-~~tiiivsH~~~~i~~~~d~i~~l 224 (261)
T PRK14258 146 KSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRS-ELTMVIVSHNLHQVSRLSDFTAFF 224 (261)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHhcCEEEEE
Confidence 4456799999999999999999999999999999999999999999999875433 455566788889999999999999
Q ss_pred cC-----CeEEEecChhHHH
Q 000612 399 SD-----GQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~-----G~iv~~G~~~~~~ 413 (1391)
++ |+++++|+++++.
T Consensus 225 ~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 225 KGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred ccCCCcCceEEEeCCHHHHH
Confidence 99 9999999999874
No 470
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=316.75 Aligned_cols=210 Identities=21% Similarity=0.276 Sum_probs=164.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|+|||||||||++|+|.++++. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 48999999999999999999999999999999999987521 1389999999877431 1235699999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ +||+||+.++....+.... .+....++++++.+|+...... .-+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~-~~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLPQ---------------------------------ADLDEIVESALKGAALWQEVKD-KLN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCcchhhh-Hhc
Confidence 7 8999999876532210000 0011234556777776321111 112
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+.+++.+.+|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR--SE-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 3456799999999999999999999999999999999999999999999864 23 45666788999999999999999
Q ss_pred c-----CCeEEEecChhHHH
Q 000612 399 S-----DGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~-----~G~iv~~G~~~~~~ 413 (1391)
+ +|++++.|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 8 59999999998873
No 471
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.5e-33 Score=309.44 Aligned_cols=192 Identities=27% Similarity=0.352 Sum_probs=159.4
Q ss_pred CceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCcH
Q 000612 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1391)
Q Consensus 879 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 958 (1391)
+.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 34679999999999999999999999999999999999865 468999999976421 1112234567899
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000612 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1391)
Q Consensus 959 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1038 (1391)
+|++.+....+. .+..+.++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987654321 223344556788999999988777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEec
Q 000612 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1391)
Q Consensus 1039 D~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~G 1091 (1391)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999986 46778999999985 7887765
No 472
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-33 Score=357.85 Aligned_cols=210 Identities=22% Similarity=0.354 Sum_probs=179.1
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 46999999999852 1358999999999999999999999999999999999876 457999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 1003 (1391)
+++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 654 4577899999999999875 9999998752 122 23477888888876543 5556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
...||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++.+ ++|+|+++|+++ ....+|++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999854 799999999985 5677999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 473
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=318.86 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=173.8
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC---CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1391)
.++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999988774 24699999999999999999999999999999999998642 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 1002 (1391)
.+... ...++.++|++|++.+++. ||.|++.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999987654332 112 23456888999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEE-EE
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1081 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~-ll 1081 (1391)
+..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 468999999999999999999999999999999999999999999999976 489999999986 4677899976 45
Q ss_pred ecCcEEEEecCC
Q 000612 1082 KRGGQEIYVGPL 1093 (1391)
Q Consensus 1082 ~~gG~~~y~G~~ 1093 (1391)
+ .|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4799999875
No 474
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=358.46 Aligned_cols=213 Identities=22% Similarity=0.314 Sum_probs=179.2
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999876 457999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 1003 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 1003 (1391)
.++ ..+++.++||+|++.+++ -|++||+.++. +.+.++ +.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 456788999999998876 69999998741 112232 346777777776543 46667765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000612 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1391)
Q Consensus 1004 ~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~ 1083 (1391)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999885 4799999999985 5678999999985
Q ss_pred CcEEEEecCC
Q 000612 1084 GGQEIYVGPL 1093 (1391)
Q Consensus 1084 gG~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 475
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.7e-34 Score=330.09 Aligned_cols=211 Identities=24% Similarity=0.351 Sum_probs=179.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|++++++.+ +.++|+|+|+++++||++||+|+||||||||++.|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999999743 3469999999999999999999999999999999999765 4689999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGLPG 1004 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~ 1004 (1391)
.. ..+++.+++++|...++ .-|+++||.++. ++.++ +.++++++.+||.+.... .+|..
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~-----~~AsD----Eel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN-----PDASD----EELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC-----CCCCH----HHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 33667789999976555 469999998752 33333 447889999999876544 45544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
.+.||||||||++|||+|++|.++++|||||.|||+.|+++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999998764 899999999976 4688999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 899999986
No 476
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=6.4e-34 Score=357.51 Aligned_cols=226 Identities=26% Similarity=0.389 Sum_probs=169.6
Q ss_pred hHhhHHHHHHhhhccccChHHHHHHHHHHHhhcC--CCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHh
Q 000612 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVG--IDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1391)
.++.+...+|+.++++.+++. .+...... ......+++|+||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~~-----~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~------------------------- 346 (529)
T TIGR02868 297 LTRVRAAAERIEEVTGAKGPR-----PEGVVPAAGALGLGKPTLELRDLSFGYPG------------------------- 346 (529)
T ss_pred HHHHHHHHHHHHHHhcCCCCc-----CCCCCCCCcccCCCCceEEEEEEEEecCC-------------------------
Confidence 567788889998888765531 10000000 1112357999999998732
Q ss_pred hhcCCccccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEc
Q 000612 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1391)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1391)
+ +++|+|+|+++++|+.++|+||||||||||+|+|+|.++|+ +|+|.+||.++++. . ++.++||+
T Consensus 347 -----~---~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~---~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 347 -----S---PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL---QGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred -----C---CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 1 13999999999999999999999999999999999999998 99999999998876 4 36899999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000612 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1391)
Q Consensus 233 Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1391)
|++.+| +.||+|||.++.. ....+.+.++++.. + .++. .-.|++..
T Consensus 415 Q~~~lF-~~TI~eNI~~g~~----~~~~e~i~~al~~a---~------------------------l~~~--i~~lp~Gl 460 (529)
T TIGR02868 415 QDAHLF-DTTVRDNLRLGRP----DATDEELWAALERV---G------------------------LADW--LRSLPDGL 460 (529)
T ss_pred cCcccc-cccHHHHHhccCC----CCCHHHHHHHHHHc---C------------------------CHHH--HHhCcccc
Confidence 987655 5699999998631 11122222222211 1 1111 22477889
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEe
Q 000612 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLL 382 (1391)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~ 382 (1391)
||.||+++. .||||||||++||||++++|+||+||||||+||+.++..|.+.|++.. .++|+|++.|
T Consensus 461 dT~ige~G~-~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~--~~~TvIiItH 527 (529)
T TIGR02868 461 DTVLGEGGA-RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL--SGKTVVVITH 527 (529)
T ss_pred cchhccccC-cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCEEEEEec
Confidence 999998765 599999999999999999999999999999999999999999998742 3456665443
No 477
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7.3e-33 Score=314.87 Aligned_cols=206 Identities=26% Similarity=0.370 Sum_probs=164.6
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCcc-----CCCcCc-------cceEEEEcC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1391)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 17 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q 93 (253)
T TIGR02323 17 KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQ 93 (253)
T ss_pred eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEEEe
Confidence 4899999999999999999999999999999999999998 9999999976 443321 245899999
Q ss_pred CCC--CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-
Q 000612 234 HDN--HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1391)
Q Consensus 234 ~d~--~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1391)
++. ..+.+|+.||+.+....... ... .+....++++++.+|+.+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~l~l~~~ 140 (253)
T TIGR02323 94 NPRDGLRMRVSAGANIGERLMAIGA-RHY--------------------------------GNIRAAAHDWLEEVEIDPT 140 (253)
T ss_pred CcccccCccccHHHHHHHHHHHhcc-cch--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 864 45667999998754211000 000 001124567889999963
Q ss_pred cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHh
Q 000612 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1391)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1391)
..++. ++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++.... .+.+||.++|+..++.+
T Consensus 141 ~~~~~-----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~vsH~~~~~~~ 214 (253)
T TIGR02323 141 RIDDL-----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRD-LGLAVIIVTHDLGVARL 214 (253)
T ss_pred hhhcC-----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHH
Confidence 44443 4569999999999999999999999999999999999999999999987543 34555667888899999
Q ss_pred hcCeEEEEcCCeEEEecChhHHH
Q 000612 391 LFDDIILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1391)
.+|++++|++|++++.|+.+++.
T Consensus 215 ~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 215 LAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred hcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988764
No 478
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-33 Score=318.17 Aligned_cols=209 Identities=25% Similarity=0.393 Sum_probs=161.7
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++. .++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 56777776631 12358999999999999999999999999999999999875 457999999986532
Q ss_pred ---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCCC
Q 000612 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKM-----FIDEVMELV--ELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 937 ---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~vg~~~~~ 1006 (1391)
..+++.++|++|++.+++ .||.||+.+... ........+ ..++.++.+ ++....+. .+.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCC
Confidence 234567999999987664 699999976421 111111000 112233333 22222222 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcE
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~ 1086 (1391)
.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++ +|+|||+++|++.. + +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999986 48999999999863 4 56999999985 79
Q ss_pred EEEecCC
Q 000612 1087 EIYVGPL 1093 (1391)
Q Consensus 1087 ~~y~G~~ 1093 (1391)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999885
No 479
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7e-33 Score=316.95 Aligned_cols=206 Identities=25% Similarity=0.324 Sum_probs=168.9
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1391)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999999988 9999999988755432 35799999986 3
Q ss_pred CCCCCCHHHHHHHhhhhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 000612 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1391)
+.+..|++|++.+..... .. . ..+....++++++.+|++ ...++
T Consensus 102 ~~~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 147 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLLSL--D--------------------------------KAERLARASEMLRAVDLDDSVLDK 147 (268)
T ss_pred cCCCCCHHHHHHHHHHhhccC--C--------------------------------HHHHHHHHHHHHHHcCCChhHhhC
Confidence 567899999987643210 00 0 001122457788899996 34444
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCe
Q 000612 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1391)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1391)
..+.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++.+ ..+++||.++|+..++.+++|+
T Consensus 148 -----~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tiiivsH~~~~i~~~~d~ 221 (268)
T PRK10419 148 -----RPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQ-QFGTACLFITHDLRLVERFCQR 221 (268)
T ss_pred -----CCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHH-HcCcEEEEEECCHHHHHHhCCE
Confidence 3456999999999999999999999999999999999999999999998754 3345666688888999999999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000612 395 IILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1391)
+++|++|++++.|+.+++.
T Consensus 222 i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 222 VMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEECCEEeeeCChhhcc
Confidence 9999999999999988764
No 480
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.6e-33 Score=347.82 Aligned_cols=211 Identities=21% Similarity=0.308 Sum_probs=180.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988874 2359999999999999999999999999999999999865 4589999999875
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
... . .++.+||++|++.+++.+||+|++.+... . ....++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 12458999999989999999999987531 1 1233456789999999987777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 47788999999986 799999
Q ss_pred cCCC
Q 000612 1091 GPLG 1094 (1391)
Q Consensus 1091 G~~~ 1094 (1391)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9864
No 481
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.1e-33 Score=330.86 Aligned_cols=211 Identities=29% Similarity=0.391 Sum_probs=177.2
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccC--CCc---CccceEEEEcCCC--
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDM--DEF---VPQRTAAYISQHD-- 235 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~--~~~---~~~~~~~yv~Q~d-- 235 (1391)
....+++||||++++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+. +.- ..++.+-+|+|++
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4567999999999999999999999999999999999999998 99999999872 111 1124677788875
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+.|.+||+++|.-.....+... ..+...+++++++..||+. .
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~----~ 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPP----E 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCH----H
Confidence 68999999999987654432110 1122346888999999984 2
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
..++++.+|||||||||+|||||+.+|+++++|||||+||.+++.++.+.|+++.++ -+.+.+.|+|+...+...||+|
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e-~g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE-LGLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHhhCceE
Confidence 446778889999999999999999999999999999999999999999999998654 4566777999999999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000612 396 ILLSDGQIVYQGPRELVLE 414 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1391)
++|++|+||+.||.+++.+
T Consensus 501 ~vm~~G~iVE~G~~~~v~~ 519 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVFE 519 (539)
T ss_pred EEEECCeEEEeCCHHHHhc
Confidence 9999999999999988743
No 482
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-33 Score=308.97 Aligned_cols=192 Identities=29% Similarity=0.418 Sum_probs=159.9
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCCCCCCCC
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1391)
|+|+++++ ++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999998 999999998764211 1357999999988888999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
++||+.+..... .. . .....++++++.+||++..+.. ++
T Consensus 92 ~~~~l~~~~~~~---~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~ 130 (214)
T cd03297 92 VRENLAFGLKRK---RN-----R----------------------------EDRISVDELLDLLGLDHLLNRY-----PA 130 (214)
T ss_pred HHHHHHHHHhhC---CH-----H----------------------------HHHHHHHHHHHHcCCHhHhhcC-----cc
Confidence 999998764211 00 0 0112356678899997655544 45
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++. ..+++|+.++|+..++.+.+|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKK-NLNIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998765 324556667888899999999999999999
Q ss_pred EEEec
Q 000612 403 IVYQG 407 (1391)
Q Consensus 403 iv~~G 407 (1391)
++..|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98775
No 483
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=346.49 Aligned_cols=217 Identities=27% Similarity=0.329 Sum_probs=180.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
-++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 377889988774 2469999999999999999999999999999999999865 4579999999875
Q ss_pred Cc----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000612 935 KQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..+++.+||++|++.+++.+||.|++.+....+.....+..+.++.++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 123567999999998889999999998853211111122334456688999999998766654 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecCcEEEEe
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y~ 1090 (1391)
|||||++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999986 788877
Q ss_pred cCC
Q 000612 1091 GPL 1093 (1391)
Q Consensus 1091 G~~ 1093 (1391)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 653
No 484
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-33 Score=317.28 Aligned_cols=215 Identities=21% Similarity=0.216 Sum_probs=173.3
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCC--C-CeEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588999998774 1358999999999999999999999999999999999753 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000612 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1391)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 1002 (1391)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87631 234567999999988777 499999988653321 111222344567777777543 222222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000612 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1391)
Q Consensus 1003 ~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~ 1082 (1391)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 799999999986 4778899999998
Q ss_pred cCcEEEEecCC
Q 000612 1083 RGGQEIYVGPL 1093 (1391)
Q Consensus 1083 ~gG~~~y~G~~ 1093 (1391)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 485
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.2e-32 Score=313.00 Aligned_cols=220 Identities=24% Similarity=0.306 Sum_probs=175.0
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++++++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 378889988763 2359999999999999999999999999999999999621124689999999875
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCCcHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000612 935 KQE---TFAR-ISGYCEQNDIHSPFVTIYESLLFSAWLRLS----PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1391)
Q Consensus 935 ~~~---~~~~-~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 1005 (1391)
... ...+ .++|++|++.+++.+|+.|++.+....... .+....+..+.+.++++.+++. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999889999999998775432110 1112223345678889999986 34444421
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-cCeEEEEecC
Q 000612 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1084 (1391)
Q Consensus 1006 ~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~-~D~~~ll~~g 1084 (1391)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++. +... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2599999999999999999999999999999999999999999999998779999999999863 4444 799999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999986
No 486
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-33 Score=316.79 Aligned_cols=207 Identities=16% Similarity=0.297 Sum_probs=160.9
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1391)
.+|+|+|++|++|++++|+|+|||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 38 ~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 114 (271)
T PRK14238 38 HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKT---TGKILYRDQNIFDKSYSVEELRTNVGMVFQKP 114 (271)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCC---ceeEEECCEEcccccccHHHHhhhEEEEecCC
Confidence 38999999999999999999999999999999999987 45 99999999886421 1245799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000612 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1391)
Q Consensus 236 ~~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1391)
.+++ .||+||+.++.+..+.... +. ....+.+.++.+++.......
T Consensus 115 ~~~~-~tv~eni~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~~~~~l~~~ 160 (271)
T PRK14238 115 NPFP-KSIYDNVTYGPKIHGIKDK-KT--------------------------------LDEIVEKSLRGAAIWDELKDR 160 (271)
T ss_pred cccc-ccHHHHHHHHHHhcCCCcH-HH--------------------------------HHHHHHHHHHHcCCcchHHHH
Confidence 7776 5999999986543211000 00 011223344454432111111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
. +..+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+.+|++
T Consensus 161 ~-~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~i~~~~d~i 236 (271)
T PRK14238 161 L-HDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK--D-YSIIIVTHNMQQAARISDKT 236 (271)
T ss_pred H-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc--C-CEEEEEEcCHHHHHHhCCEE
Confidence 1 234567999999999999999999999999999999999999999999998742 3 45666888889999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+.+++.
T Consensus 237 ~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 237 AFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 487
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=6e-33 Score=308.73 Aligned_cols=196 Identities=28% Similarity=0.399 Sum_probs=160.2
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1391)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999988 9999999998754322 35799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+.+|+.||+.++...... .. ..+....++++++.+||.+..++.
T Consensus 95 ~~~t~~~n~~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~--- 138 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN-LS--------------------------------YQEARERARAMLEAVGLGDHLDYY--- 138 (220)
T ss_pred CCCCHHHHHHHHHHhccC-CC--------------------------------HHHHHHHHHHHHHHcCChhhhhcC---
Confidence 889999999986532210 00 001122456788999997666654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....++|+|+ ++|+.. +.+.+|+|++|
T Consensus 139 --~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 139 --PHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILI-VTHDNR-ILDVADRIVHM 214 (220)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHH-HHhhCCEEEEE
Confidence 45699999999999999999999999999999999999999999999876433445444 666665 56899999999
Q ss_pred cCCeE
Q 000612 399 SDGQI 403 (1391)
Q Consensus 399 ~~G~i 403 (1391)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 488
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-33 Score=316.04 Aligned_cols=218 Identities=19% Similarity=0.240 Sum_probs=173.5
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCC--C-eEEEEEEEcC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1391)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899988774 23689999999999999999999999999999999996431 1 2579999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000612 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1391)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 1006 (1391)
.++. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+..... .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 8753 1234567999999988777 499999988653321 11 12334566778888874321111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEec---
Q 000612 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1083 (1391)
Q Consensus 1007 ~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~--- 1083 (1391)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 58899999999982
Q ss_pred -----CcEEEEecCC
Q 000612 1084 -----GGQEIYVGPL 1093 (1391)
Q Consensus 1084 -----gG~~~y~G~~ 1093 (1391)
.|++++.|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4799999985
No 489
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.1e-33 Score=310.93 Aligned_cols=198 Identities=26% Similarity=0.387 Sum_probs=159.2
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++ .|
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~-~t 96 (225)
T PRK10247 21 KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT---SGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG-DT 96 (225)
T ss_pred eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCeEEECCEEcCcCCHHHHHhccEEEeccccccc-cc
Confidence 4999999999999999999999999999999999999988 9999999987654332 357899999987776 59
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1391)
|+||+.+.....+. .. ....++++++.+||. ...++. +
T Consensus 97 v~enl~~~~~~~~~--~~----------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 135 (225)
T PRK10247 97 VYDNLIFPWQIRNQ--QP----------------------------------DPAIFLDDLERFALPDTILTKN-----I 135 (225)
T ss_pred HHHHHHhHHhhcCC--Ch----------------------------------HHHHHHHHHHHcCCChHHhcCC-----c
Confidence 99999875432110 00 011245678899995 344443 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc-C
Q 000612 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS-D 400 (1391)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~-~ 400 (1391)
+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+..+ ++|+.++|+..++. .+|++++|+ +
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sh~~~~~~-~~d~i~~l~~~ 213 (225)
T PRK10247 136 AELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQN-IAVLWVTHDKDEIN-HADKVITLQPH 213 (225)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECChHHHH-hCCEEEEEecc
Confidence 56999999999999999999999999999999999999999999998765334 45555777777774 699999994 6
Q ss_pred CeEEEecChh
Q 000612 401 GQIVYQGPRE 410 (1391)
Q Consensus 401 G~iv~~G~~~ 410 (1391)
+..+.+|+++
T Consensus 214 ~~~~~~~~~~ 223 (225)
T PRK10247 214 AGEMQEARYE 223 (225)
T ss_pred cchHhhhhhc
Confidence 7777777764
No 490
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=8.8e-32 Score=345.46 Aligned_cols=123 Identities=23% Similarity=0.287 Sum_probs=99.7
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 000612 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1030 (1391)
Q Consensus 955 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrqRl~iA~~L~~---~p~ill 1030 (1391)
.+||.|.+.|...+. .. ....++++.+||... .+.. ...||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467777777654321 11 124578888998753 3333 46799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000612 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1391)
Q Consensus 1031 LDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~-----~gG~~~y~G~~ 1093 (1391)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 346799999994 57999999985
No 491
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.8e-33 Score=353.64 Aligned_cols=212 Identities=28% Similarity=0.419 Sum_probs=179.6
Q ss_pred ceeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc
Q 000612 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1391)
Q Consensus 854 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1391)
..++|+|++|.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999999852 12358999999999999999999999999999999999876 458999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000612 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR------QSLVGLPG 1004 (1391)
Q Consensus 934 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~~~ 1004 (1391)
+.+ ..+++.++||+|++.+++ .|++||+.++. ++.+ ++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----CccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 456778999999988876 59999998752 1222 34478889999987653 4566654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1005 ~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
...||||||||++|||+|+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++. ...+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCEEEEEeC-
Confidence 46799999999999999999999999999999999999999999999985 58999999999863 467999999985
Q ss_pred cEEEEecCC
Q 000612 1085 GQEIYVGPL 1093 (1391)
Q Consensus 1085 G~~~y~G~~ 1093 (1391)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 799999885
No 492
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=312.69 Aligned_cols=210 Identities=20% Similarity=0.299 Sum_probs=161.7
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1391)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 19 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 98 (252)
T PRK14255 19 EALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNPF 98 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCccC
Confidence 49999999999999999999999999999999999865 3111289999999877421 1235799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000612 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1391)
Q Consensus 239 ~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1391)
+ .||+||+.+.....+.... +. ....+.+.++.+++....... -+
T Consensus 99 ~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~-~~ 143 (252)
T PRK14255 99 P-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDH-LH 143 (252)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhH-Hh
Confidence 7 7999999886543221100 00 001223445556553211111 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEE
Q 000612 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1391)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL 398 (1391)
..+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. + .+||.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l 220 (252)
T PRK14255 144 ESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998743 3 45666788889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000612 399 SDGQIVYQGPRELVL 413 (1391)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1391)
++|+++..|+..++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 221 LTGNLIEFADTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999888763
No 493
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-33 Score=317.26 Aligned_cols=231 Identities=21% Similarity=0.251 Sum_probs=176.2
Q ss_pred hcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhHhhhcCCccccceeeecceEEEeCCeEEEEEcCCC
Q 000612 109 RVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPS 188 (1391)
Q Consensus 109 ~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 188 (1391)
...+..+..-++++||++.+. .+.+|+|+|+++++||+++|+||||
T Consensus 11 ~~~~~~~~~~l~~~nl~~~~~----------------------------------~~~~l~~vs~~i~~Ge~~~IiG~nG 56 (274)
T PRK14265 11 SATINPDHSVFEVEGVKVFYG----------------------------------GFLALVDVHLKIPAKKIIAFIGPSG 56 (274)
T ss_pred ccccCCCCceEEEeeEEEEeC----------------------------------CeEEEeeeeeEEcCCCEEEEECCCC
Confidence 344555556788999998762 1249999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhh
Q 000612 189 SGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYE 261 (1391)
Q Consensus 189 sGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTVrE~l~f~~~~~~~~~~~~ 261 (1391)
|||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+++ .||.||+.++....+...
T Consensus 57 sGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~~~~~--- 132 (274)
T PRK14265 57 CGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPFP-KSIYENIAFAPRANGYKG--- 132 (274)
T ss_pred CCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCcccc-ccHHHHHHhHHHhcCchH---
Confidence 999999999999986310 1289999999886421 12457999999987776 499999987643221100
Q ss_pred hhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcC
Q 000612 262 MLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGP 341 (1391)
Q Consensus 262 ~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~ 341 (1391)
+ ....++..++.+|+....... -+..+..|||||||||+|||||+.+
T Consensus 133 ---~-----------------------------~~~~~~~~l~~~~l~~~l~~~-~~~~~~~LSgGq~qrv~LAraL~~~ 179 (274)
T PRK14265 133 ---N-----------------------------LDELVEDSLRRAAIWEEVKDK-LKEKGTALSGGQQQRLCIARAIAMK 179 (274)
T ss_pred ---H-----------------------------HHHHHHHHHHHcccchhhHHH-hcCCcccCCHHHHHHHHHHHHHhhC
Confidence 0 001123345555653211111 1234557999999999999999999
Q ss_pred CccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEc---------CCeEEEecChhHH
Q 000612 342 ALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS---------DGQIVYQGPRELV 412 (1391)
Q Consensus 342 p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~---------~G~iv~~G~~~~~ 412 (1391)
|++|||||||+|||..+...+.+.|+++. .+ ++|+.++|+..++.+++|++++|+ +|++++.|+.+++
T Consensus 180 p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~~~~~ 256 (274)
T PRK14265 180 PDVLLMDEPCSALDPISTRQVEELCLELK--EQ-YTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFSPTEQM 256 (274)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeCCHHHH
Confidence 99999999999999999999999999874 23 566678899999999999999997 8999999999887
Q ss_pred H
Q 000612 413 L 413 (1391)
Q Consensus 413 ~ 413 (1391)
.
T Consensus 257 ~ 257 (274)
T PRK14265 257 F 257 (274)
T ss_pred H
Confidence 4
No 494
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-33 Score=312.49 Aligned_cols=205 Identities=26% Similarity=0.407 Sum_probs=160.0
Q ss_pred eeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000612 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1391)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .|
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVD---SGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DT 91 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCC---CCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-cc
Confidence 4899999999999999999999999999999999999998 9999999987654322 356999999887765 79
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc--CCcccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLDVCADTMVGDEM 320 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~~ 320 (1391)
|+||+.+..... ..+...+. .+ ....+..++.+ |+....+ ..
T Consensus 92 v~enl~~~~~~~----~~~~~~~~---~~------------------------~~~~~~~~~~l~~~l~~~~~-----~~ 135 (234)
T cd03251 92 VAENIAYGRPGA----TREEVEEA---AR------------------------AANAHEFIMELPEGYDTVIG-----ER 135 (234)
T ss_pred HHHHhhccCCCC----CHHHHHHH---HH------------------------HcCcHHHHHhcccCcceeec-----cC
Confidence 999998754211 00000000 00 00123445555 5543333 33
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcC
Q 000612 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1391)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~ 400 (1391)
+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.. +|++++|++
T Consensus 136 ~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tii~~sh~~~~~~~-~d~v~~l~~ 211 (234)
T cd03251 136 GVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM--KN-RTTFVIAHRLSTIEN-ADRIVVLED 211 (234)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CC-CEEEEEecCHHHHhh-CCEEEEecC
Confidence 55799999999999999999999999999999999999999999999874 34 445556777778765 999999999
Q ss_pred CeEEEecChhHHHH
Q 000612 401 GQIVYQGPRELVLE 414 (1391)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1391)
|++++.|+.+++.+
T Consensus 212 G~i~~~~~~~~~~~ 225 (234)
T cd03251 212 GKIVERGTHEELLA 225 (234)
T ss_pred CeEeeeCCHHHHHH
Confidence 99999999887754
No 495
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-34 Score=304.38 Aligned_cols=196 Identities=26% Similarity=0.396 Sum_probs=169.5
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCc-----C--ccceEEEEcCCCCCCCCCC
Q 000612 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----V--PQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~--~~~~~~yv~Q~d~~~~~lT 242 (1391)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|+|.+||..+.+. . .+|.+|||+||-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577888776899999999999999999999999999 99999999765322 1 2488999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|+-||.|+.... .....|++...||+++..+ +++.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~-----R~P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLD-----RYPG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHh-----hCCC
Confidence 999999986321 0112467888999998877 4456
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++... -+.=|+-++|...|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 79999999999999999999999999999999999999999999988764 44556678999999999999999999999
Q ss_pred EEEecChhHHHH
Q 000612 403 IVYQGPRELVLE 414 (1391)
Q Consensus 403 iv~~G~~~~~~~ 414 (1391)
+...|+.+++.+
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998753
No 496
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.8e-33 Score=314.19 Aligned_cols=215 Identities=26% Similarity=0.279 Sum_probs=172.6
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCcc-
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1391)
.+.++|+++.++ ...+|+|+|++|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 367888888764 1358999999999999999999999999999999999875 458999999875
Q ss_pred ----CCcc-------cccceEEEeccCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000612 934 ----KKQE-------TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1391)
Q Consensus 934 ----~~~~-------~~~~~~gyv~Q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 999 (1391)
.... ..++.++|++|++. ..+.+|+.|++.+..... .. ......++.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 12346899999974 345678999986542211 11 111233456788999999963 55554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeE
Q 000612 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1391)
Q Consensus 1000 vg~~~~~~lSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~ 1078 (1391)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. ++.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4679999999999999999999999999999999999999999999998754 899999999986 477789999
Q ss_pred EEEecCcEEEEecCC
Q 000612 1079 FLMKRGGQEIYVGPL 1093 (1391)
Q Consensus 1079 ~ll~~gG~~~y~G~~ 1093 (1391)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 799999875
No 497
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.7e-33 Score=309.82 Aligned_cols=209 Identities=22% Similarity=0.347 Sum_probs=169.4
Q ss_pred eeEEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccC
Q 000612 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1391)
Q Consensus 855 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1391)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899988763 2359999999999999999999999999999999999765 4589999999765
Q ss_pred Cc---ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000612 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1391)
Q Consensus 935 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSg 1010 (1391)
.. ..+++.++|++|++.+++ .|++||+.+....+.. . ..++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 224567999999988776 4999999875433221 1 1124567899999995 345544 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcCeEEEEecCcEEEE
Q 000612 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1391)
Q Consensus 1011 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~~D~~~ll~~gG~~~y 1089 (1391)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|+++. + +.+|++++|++.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998754 8999999999863 4 56999999964444444
Q ss_pred ec
Q 000612 1090 VG 1091 (1391)
Q Consensus 1090 ~G 1091 (1391)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 43
No 498
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-33 Score=295.94 Aligned_cols=209 Identities=23% Similarity=0.366 Sum_probs=184.6
Q ss_pred ccceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCC
Q 000612 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1391)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1391)
..+.+++|+||.++||+|.+++|||||||||.+++|.|+++|+ +|+|+++|.+++... +..|||.|.+.-+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 4567999999999999999999999999999999999999998 999999999876543 356999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000612 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1391)
Q Consensus 243 VrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1391)
|.|.|.|-++++|.... +.....+++|+.+++....... ++
T Consensus 89 v~dql~yla~LkGm~~~----------------------------------e~~~~~~~wLer~~i~~~~~~k-----Ik 129 (300)
T COG4152 89 VEDQLKYLAELKGMPKA----------------------------------EIQKKLQAWLERLEIVGKKTKK-----IK 129 (300)
T ss_pred HHHHHHHHHHhcCCcHH----------------------------------HHHHHHHHHHHhccccccccch-----HH
Confidence 99999999999885321 2334567889999998766544 45
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeEEEEcCCe
Q 000612 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1391)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~iilL~~G~ 402 (1391)
.||-|.+|++.+-.+++++|++++||||+||||+.++..+-+.+.++. ..+++||..+|.+..+.++||++++|++|+
T Consensus 130 ~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk--~~GatIifSsH~Me~vEeLCD~llmL~kG~ 207 (300)
T COG4152 130 ELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELK--EEGATIIFSSHRMEHVEELCDRLLMLKKGQ 207 (300)
T ss_pred HhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHH--hcCCEEEEecchHHHHHHHhhhhheecCCc
Confidence 699999999999999999999999999999999999999999999874 456666777889999999999999999999
Q ss_pred EEEecChhHHHHHH
Q 000612 403 IVYQGPRELVLEFF 416 (1391)
Q Consensus 403 iv~~G~~~~~~~~f 416 (1391)
.|.+|+.++++.-|
T Consensus 208 ~V~~G~v~~ir~~~ 221 (300)
T COG4152 208 TVLYGTVEDIRRSF 221 (300)
T ss_pred eEEeccHHHHHHhc
Confidence 99999999998754
No 499
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-33 Score=351.41 Aligned_cols=207 Identities=25% Similarity=0.300 Sum_probs=173.3
Q ss_pred ceeeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCC--C
Q 000612 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--N 236 (1391)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1391)
..+|+||||+|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~ 413 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQ---GGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYAS 413 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhh
Confidence 46999999999999999999999999999999999999998 999999998875432 135799999986 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000612 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1391)
Q Consensus 237 ~~~~lTVrE~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1391)
+++.+||.||+.+.....+...+ .+...+++++|+.+||+ ...++.
T Consensus 414 l~~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~L~~~gL~~~~~~~~ 460 (623)
T PRK10261 414 LDPRQTVGDSIMEPLRVHGLLPG---------------------------------KAAAARVAWLLERVGLLPEHAWRY 460 (623)
T ss_pred cCCCCCHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCCHHHhhCC
Confidence 88999999999876533211000 01123467789999996 445544
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCchhHHhhcCeE
Q 000612 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1391)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEPtsgLD~~t~~~i~~~L~~~~~~~~~t~ii~i~q~~~~~~~~~D~i 395 (1391)
+..|||||||||+||+||+.+|++|||||||+|||..++.++.+.|+++.+. .+.+||.++|+..++.++||+|
T Consensus 461 -----~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~-~g~tvi~isHdl~~v~~~~dri 534 (623)
T PRK10261 461 -----PHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRD-FGIAYLFISHDMAVVERISHRV 534 (623)
T ss_pred -----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999987653 3456667899999999999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000612 396 ILLSDGQIVYQGPRELVL 413 (1391)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1391)
++|++|++++.|+.+++.
T Consensus 535 ~vl~~G~iv~~g~~~~i~ 552 (623)
T PRK10261 535 AVMYLGQIVEIGPRRAVF 552 (623)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999998874
No 500
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-33 Score=296.80 Aligned_cols=168 Identities=27% Similarity=0.417 Sum_probs=148.1
Q ss_pred EEeceeeEeecchhhhhcccccCceEEeeccEEEEeCCeEEEEEccCCCChHHHHHhHcCCCCCCeEEEEEEEcCccCCc
Q 000612 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1391)
Q Consensus 857 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1391)
+++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 4677777653 1358999999999999999999999999999999999865 358999999987543
Q ss_pred --ccccceEEEeccCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000612 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1391)
Q Consensus 937 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrq 1014 (1391)
..+++.++|++|++.+++..|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888889998863 8999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000612 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1391)
Q Consensus 1015 Rl~iA~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~~D~~~ll~~g 1084 (1391)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999986 577789999999864
Done!