BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>000613
MARFHSHPHHYSLHFAFLFTLFIFFTNPNFVLSSTYHDDFSIIDFDSNLFHQDYSPPSPP
PPPPHPPSVSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGC
SIAVNISGNFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSGTPQGIEG
GGGGHGGRGACCLVDESKLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYGGGGGGR
IKMVIDEYVVLDGSISADGGDGGHKGGGGSGGSIYLIAYKMTGSGLISACGGNGYAGGGG
GRVSVDIFSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLL
EFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEE
LLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSN
ANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCE
IQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAI
SASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNANLPCELGSGS
GNDTSGNSTAGGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNGSIGGAG
GGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIPTGDVYQPIAS
VRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQC
PPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWLFCLLLVG
LLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHV
HRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAI
LAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLD
FFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRL
VAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLL
VYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRK
RSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLLGDFSLVLLTL
LQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYALWNVTSLINVV
SHCVFALIHFY

High Scoring Gene Products

Symbol, full name Information P value
AT4G32920 protein from Arabidopsis thaliana 0.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  000613
        (1391 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2123762 - symbol:AT4G32920 "AT4G32920" species...  3712  0.        2


>TAIR|locus:2123762 [details] [associations]
            symbol:AT4G32920 "AT4G32920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005773 "vacuole" evidence=IDA] [GO:0006486
            "protein glycosylation" evidence=RCA] GO:GO:0005773 EMBL:CP002687
            IPI:IPI00546159 RefSeq:NP_001190893.1 RefSeq:NP_001190894.1
            RefSeq:NP_567910.1 UniGene:At.26242 UniGene:At.67561
            ProteinModelPortal:F4JV81 PRIDE:F4JV81 EnsemblPlants:AT4G32920.1
            EnsemblPlants:AT4G32920.2 EnsemblPlants:AT4G32920.3 GeneID:829429
            KEGG:ath:AT4G32920 OMA:DENEWWI ArrayExpress:F4JV81 Uniprot:F4JV81
        Length = 1432

 Score = 3712 (1311.7 bits), Expect = 0., Sum P(2) = 0.
 Identities = 714/1232 (57%), Positives = 860/1232 (69%)

Query:    69 VSCTDDLDGIGTLDSTCQIVNDLNLTRDVYICGKGNFEILTGVKFHCPISGCSIAVNISG 128
             VSC DDL G+G+LDSTC++V DLNLTRD+ I GKGN  +L GV+  C   GCSI+VNISG
Sbjct:    58 VSCVDDLGGVGSLDSTCKLVADLNLTRDLNITGKGNLHVLPGVRLVCQFPGCSISVNISG 117

Query:   129 NFTLGVNSSIVSGTFELVAQNASFLNGSVVNTTGLAGAPPPQTSXXXXXXXXXXXXXXXX 188
             NF+L  NSS+++GTF L A+NA F   S V+TTGLAG PPP TS                
Sbjct:   118 NFSLAENSSVIAGTFRLAAENAEFGLSSAVDTTGLAGEPPPDTSGTPEGVEGAGGGYGGR 177

Query:   189 XACCLVDES-KLPEDVWGGDAYSWSSLQKPWSYGSRGGTTSQEFDYXXXXXXRIKMVIDE 247
              ACCL D + K+PEDV+GGD Y WSSL+KP  YGSRGG+TS E DY       + + I  
Sbjct:   178 GACCLSDTTTKIPEDVFGGDVYGWSSLEKPEIYGSRGGSTSNEVDYGGGGGGTVAIEILG 237

Query:   248 YVVLXXXXXXXXXXXXXXXXXXXXXXIYLIAYKMTGSGLISACXXXXXXXXXXXRVSVDI 307
             Y+ L                      I+++A+KM G+G +SA            RVSVDI
Sbjct:   238 YISLNGSVLADGASGGVKGGGGSGGSIFVMAHKMAGNGRLSASGGDGYAGGGGGRVSVDI 297

Query:   308 FSRHDEPKIFVHGGNSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTDTETLLLEFPNQPL 367
             +SRH +PKIF +GG SF CP+NAG AGTLYD +  +LT+ N+N +T T+TLLLEFPN  L
Sbjct:   298 YSRHSDPKIFFNGGRSFGCPENAGAAGTLYDVISESLTIDNHNKTTYTDTLLLEFPNHRL 357

Query:   368 WTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYATSEFELLAEELLMSDSV 427
             +TN+Y++N A+  VPL WSRVQVQG ISLS GG L+FGL  YA+SEFEL AEELLMS+S 
Sbjct:   358 FTNLYIRNMAKVAVPLRWSRVQVQGLISLSNGGELNFGLPRYASSEFELFAEELLMSNSA 417

Query:   428 IKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVLKEFSIIHSNANLEVHG 487
             IKVYGALRMTVK+FLM  S M +DGGG   + TS+LE SNL+VLKE S+I SN NL VHG
Sbjct:   418 IKVYGALRMTVKVFLMLKSRMFIDGGGVTILGTSMLEISNLLVLKESSVIQSNGNLGVHG 477

Query:   488 QGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTDAVTPRLYCEIQDCPVE 547
             QGLLNL+G GD IEAQRL+L+LFYSI VG G+VLR PL+NA+T  +TP+LYC+ QDCPVE
Sbjct:   478 QGLLNLTGTGDTIEAQRLILSLFYSIQVGAGAVLRGPLQNASTGGLTPKLYCQRQDCPVE 537

Query:   548 LLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRARTISVQSSGAISASXXXX 607
             LLHPPEDCNVNSSL FTLQICRVEDI V+GL++GSV+ FH ART+ V+SSG ISA     
Sbjct:   538 LLHPPEDCNVNSSLPFTLQICRVEDITVEGLIKGSVIQFHLARTVLVRSSGTISADGMGC 597

Query:   608 XXXXXXXXXXXXXXXXXXXXXXXXXXXCFNDSCVEGGISYGNANLPCELXXXXXXXXXXX 667
                                        C+N +C+EGG SYGNA+LPCEL           
Sbjct:   598 KGGVGTGRFLRSGIGSGGGHGGKGGSGCYNHTCIEGGESYGNADLPCELGSGSGNEESTD 657

Query:   668 XXXXXXIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVVRNXXXXXXXXXXXXTI 727
                   IIV+GS EHPLSSLS+EGS+  DG+S      +K     +            T+
Sbjct:   658 SVAGGGIIVLGSLEHPLSSLSLEGSITTDGES-----PRKTLKGLSNSSLGPGGGSGGTV 712

Query:   728 LLFLHTLDIGDSAVLSSVXXXXXXXXXXXXXXXRIHFHWSDIPTGDVYQPIASVRGSIRI 787
             LLFL TL+IG SA+LSS+               RIHFHWSDIPTGDVY P+A V+G + +
Sbjct:   713 LLFLRTLEIGRSAILSSIGGNGSLKGGGGGSGGRIHFHWSDIPTGDVYHPVAIVKGRVYV 772

Query:   788 XXXXXXXXXXXXXXXXXXXKACPKGLYGIFCEECPVGTYKNVTGSDKSLCHQCPPQEFPH 847
                                KACP+GLYG+FCEECP GTYKNVTGSDK+LCH CP  + PH
Sbjct:   773 RGGMGIIEDNIGGNGTLTGKACPEGLYGLFCEECPSGTYKNVTGSDKALCHLCPANDIPH 832

Query:   848 RAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGPWXXXXXXXXXXXXXXX 907
             RAVY++VRGG+AETPCPY+CIS+RYHMPHCYT LEELIYTFGGPW               
Sbjct:   833 RAVYVTVRGGVAETPCPYKCISDRYHMPHCYTTLEELIYTFGGPWLFGVLLVVVLLLLAL 892

Query:   908 XXXXARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETNRAEESHSHVHRMYFMG 967
                 ARMKFV  DEL G APTQHGSQIDHSFPFLESLNEV+ET+R EES  H+HR+YF+G
Sbjct:   893 VFSVARMKFVSGDELHGSAPTQHGSQIDHSFPFLESLNEVMETSRVEESQGHMHRIYFLG 952

Query:   968 PNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWEGAIYSILAILAYPLAW 1027
             PNTFS+PWHL HTPPE+IKEIVYE AFN FVDE+N IA Y WWEGAIY +L++L YPLAW
Sbjct:   953 PNTFSEPWHLSHTPPEEIKEIVYEAAFNGFVDEVNVIAAYQWWEGAIYIMLSVLVYPLAW 1012

Query:  1028 SWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAATPDLMLAYLDFFLGGDE 1087
             SWQQ RRR+K Q+LR++VRSEYDH+CLRSCRSRALYEGLKVAATPDLMLA+LDFFLGGDE
Sbjct:  1013 SWQQSRRRLKFQKLRDFVRSEYDHSCLRSCRSRALYEGLKVAATPDLMLAHLDFFLGGDE 1072

Query:  1088 KRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQLVPPTICYRLVAGLNAQ 1147
             KR+DLPP +H R PM LIFGGDGSYMA +SLQ+D+ILTSL+SQLVPPT  YR VAGLNAQ
Sbjct:  1073 KRSDLPPQVHQRLPMPLIFGGDGSYMAYYSLQSDDILTSLLSQLVPPTTWYRFVAGLNAQ 1132

Query:  1148 LRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATACGYCQYGLLVYAVGGE 1207
             LRLV++G+LR+TFR V+RW+ETH NP L+ HG+RVDLA FQA +   CQYG+LV+ +   
Sbjct:  1133 LRLVQQGKLRSTFRSVMRWIETHGNPALKRHGVRVDLARFQALSSSSCQYGILVHTIA-- 1190

Query:  1208 NEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQRSSESYMKRKRSHGGII 1267
             +E  S  S D       +       +EN SG  RE     +  RS  ++++ +   G II
Sbjct:  1191 DEVASTRSDDE----TEQQHPWGTQIENHSGDFRENF---QPLRSEINHVRHQEC-GEII 1242

Query:  1268 DTNNVQMLEERRDIFYFLSFIVHNTKPVGHQD 1299
             D  ++Q L+E +D+   +SF++HNTKPVGHQD
Sbjct:  1243 DIGSLQFLKEEKDVLSLISFLIHNTKPVGHQD 1274

 Score = 138 (53.6 bits), Expect = 0., Sum P(2) = 0.
 Identities = 26/41 (63%), Positives = 31/41 (75%)

Query:  1351 NALFSHGPRRSVGLARVYALWNVTSLINVVSHCVFALIHFY 1391
             +ALFSHGPRRS    RVYALWNVTSL+NVV   V   +H++
Sbjct:  1326 SALFSHGPRRSASRTRVYALWNVTSLVNVVVAFVCGYVHYH 1366

 Score = 45 (20.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query:   322 NSFACPDNAGGAGTLYDAVPRTLTVSNYNMSTD 354
             +S +C D+ GG G+L D+  +   V++ N++ D
Sbjct:    56 SSVSCVDDLGGVGSL-DSTCKL--VADLNLTRD 85


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1391      1143   0.00092  123 3  11 22  0.37    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  561 KB (2253 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  82.97u 0.15s 83.12t   Elapsed:  00:00:04
  Total cpu time:  82.97u 0.15s 83.12t   Elapsed:  00:00:04
  Start:  Mon May 20 15:12:48 2013   End:  Mon May 20 15:12:52 2013

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