Query 000615
Match_columns 1389
No_of_seqs 881 out of 5975
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 20:46:05 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000615.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000615hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 5E-247 1E-251 2271.3 96.6 1274 51-1389 12-1304(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-225 3E-230 2235.1 132.8 1360 5-1389 4-1396(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 5E-178 1E-182 1786.5 121.5 1221 113-1389 3-1285(1394)
4 PLN03211 ABC transporter G-25; 100.0 8.7E-85 1.9E-89 822.6 52.8 515 851-1388 36-584 (659)
5 KOG0061 Transporter, ABC super 100.0 3.2E-85 7E-90 817.7 46.0 508 851-1388 22-537 (613)
6 TIGR00955 3a01204 The Eye Pigm 100.0 6.4E-83 1.4E-87 807.5 49.9 494 879-1388 37-540 (617)
7 KOG0061 Transporter, ABC super 100.0 4.1E-80 8.9E-85 771.8 57.2 585 133-797 21-608 (613)
8 TIGR00955 3a01204 The Eye Pigm 100.0 1.3E-79 2.8E-84 777.3 57.4 572 181-796 35-612 (617)
9 PLN03211 ABC transporter G-25; 100.0 3E-78 6.5E-83 763.2 63.4 610 132-797 34-658 (659)
10 TIGR00956 3a01205 Pleiotropic 100.0 3.2E-79 6.9E-84 826.3 50.9 495 878-1389 72-601 (1394)
11 PLN03140 ABC transporter G fam 100.0 1.1E-76 2.4E-81 797.1 61.5 599 131-798 861-1467(1470)
12 KOG0055 Multidrug/pheromone ex 100.0 3.1E-75 6.8E-80 732.4 61.7 771 179-1092 361-1208(1228)
13 KOG0054 Multidrug resistance-a 100.0 5.2E-71 1.1E-75 711.6 54.0 749 184-1093 534-1358(1381)
14 TIGR01257 rim_protein retinal- 100.0 2.4E-69 5.3E-74 724.1 71.3 217 854-1093 1937-2155(2272)
15 KOG0065 Pleiotropic drug resis 100.0 1.7E-72 3.7E-77 704.9 34.2 533 182-763 802-1347(1391)
16 PLN03130 ABC transporter C fam 100.0 3.2E-67 6.9E-72 716.2 62.2 212 853-1093 1236-1457(1622)
17 PLN03232 ABC transporter C fam 100.0 1.4E-66 3E-71 710.8 61.8 211 853-1092 1233-1453(1495)
18 PTZ00265 multidrug resistance 100.0 1.9E-65 4.1E-70 692.5 58.2 217 853-1092 1164-1447(1466)
19 COG1123 ATPase components of v 100.0 2.5E-65 5.4E-70 606.0 49.4 474 184-1092 22-514 (539)
20 TIGR00957 MRP_assoc_pro multi 100.0 4.3E-64 9.4E-69 687.2 63.1 212 853-1093 1283-1504(1522)
21 PRK13549 xylose transporter AT 100.0 5.3E-64 1.1E-68 624.4 49.1 460 184-1094 18-491 (506)
22 PRK10762 D-ribose transporter 100.0 8.2E-64 1.8E-68 621.9 48.4 450 184-1094 17-481 (501)
23 PRK09700 D-allose transporter 100.0 6E-64 1.3E-68 624.9 47.1 458 184-1092 18-493 (510)
24 PRK10261 glutathione transport 100.0 1.9E-63 4.1E-68 630.7 50.7 488 184-1093 29-549 (623)
25 PRK15439 autoinducer 2 ABC tra 100.0 3.3E-63 7.1E-68 616.8 48.8 453 184-1093 24-488 (510)
26 PTZ00243 ABC transporter; Prov 100.0 1.7E-62 3.7E-67 669.2 59.5 211 853-1092 1307-1528(1560)
27 PRK15134 microcin C ABC transp 100.0 4E-63 8.7E-68 619.7 48.2 464 184-1092 22-510 (529)
28 TIGR03269 met_CoM_red_A2 methy 100.0 4.7E-63 1E-67 618.3 48.4 445 184-1092 13-512 (520)
29 TIGR01271 CFTR_protein cystic 100.0 1.3E-61 2.8E-66 660.8 63.5 210 853-1092 1216-1435(1490)
30 PRK11288 araG L-arabinose tran 100.0 1.3E-62 2.7E-67 611.3 47.2 451 184-1094 17-482 (501)
31 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-62 2.6E-67 612.2 46.9 459 184-1092 14-487 (500)
32 PRK10982 galactose/methyl gala 100.0 1.2E-61 2.5E-66 601.6 45.6 449 184-1092 11-475 (491)
33 PRK10938 putative molybdenum t 100.0 2.7E-60 5.7E-65 589.7 42.2 447 184-1089 16-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 5.6E-58 1.2E-62 508.5 42.4 470 182-1092 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 2.1E-57 4.6E-62 570.0 51.7 201 854-1091 324-527 (556)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.2E-57 2.7E-62 572.1 48.0 201 854-1091 322-525 (552)
37 PRK15064 ABC transporter ATP-b 100.0 1.9E-57 4.2E-62 568.6 47.2 198 854-1092 319-520 (530)
38 PRK13409 putative ATPase RIL; 100.0 6.5E-56 1.4E-60 553.6 41.5 211 854-1106 340-554 (590)
39 COG1129 MglA ABC-type sugar tr 100.0 1.5E-54 3.3E-59 511.2 44.0 451 182-1091 19-484 (500)
40 PRK11147 ABC transporter ATPas 100.0 2.4E-54 5.2E-59 549.4 49.3 202 854-1092 319-523 (635)
41 PRK10636 putative ABC transpor 100.0 4.3E-54 9.3E-59 545.5 50.9 197 854-1092 312-512 (638)
42 PLN03073 ABC transporter F fam 100.0 2.6E-51 5.6E-56 520.5 48.9 200 854-1092 508-709 (718)
43 COG0488 Uup ATPase components 100.0 4.1E-51 8.9E-56 496.4 42.1 225 182-433 14-240 (530)
44 COG3845 ABC-type uncharacteriz 100.0 1.8E-50 3.9E-55 465.2 39.6 457 183-1093 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 3.4E-44 7.3E-49 373.2 21.5 206 876-1092 11-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.2E-43 4.9E-48 367.1 19.1 222 182-454 13-238 (240)
47 KOG0927 Predicted transporter 100.0 2.6E-42 5.7E-47 397.8 28.7 202 853-1092 388-591 (614)
48 COG1131 CcmA ABC-type multidru 100.0 2.3E-41 4.9E-46 389.1 23.4 202 879-1092 17-221 (293)
49 COG1135 AbcC ABC-type metal io 100.0 1.7E-41 3.8E-46 370.2 20.4 203 879-1093 18-227 (339)
50 COG1127 Ttg2A ABC-type transpo 100.0 2.6E-41 5.7E-46 357.0 20.4 231 854-1108 8-250 (263)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.3E-41 1.4E-45 366.2 21.9 217 854-1094 4-224 (254)
52 COG3839 MalK ABC-type sugar tr 100.0 3E-41 6.5E-46 384.7 20.1 217 186-453 18-235 (338)
53 COG1116 TauB ABC-type nitrate/ 100.0 5E-41 1.1E-45 361.4 19.3 192 879-1083 15-207 (248)
54 COG1125 OpuBA ABC-type proline 100.0 4.5E-41 9.7E-46 355.7 18.5 205 877-1093 11-221 (309)
55 COG1120 FepC ABC-type cobalami 100.0 8.2E-41 1.8E-45 367.5 21.3 218 855-1094 3-225 (258)
56 COG1135 AbcC ABC-type metal io 100.0 8.7E-41 1.9E-45 364.7 20.5 225 182-457 17-247 (339)
57 COG1131 CcmA ABC-type multidru 100.0 1.5E-40 3.3E-45 382.2 22.8 212 183-437 17-230 (293)
58 KOG0058 Peptide exporter, ABC 100.0 1.5E-40 3.2E-45 398.9 22.1 213 179-433 476-691 (716)
59 COG3842 PotA ABC-type spermidi 100.0 8.5E-41 1.8E-45 383.0 18.6 223 183-455 17-240 (352)
60 COG4555 NatA ABC-type Na+ tran 100.0 7.9E-41 1.7E-45 342.3 15.3 201 881-1093 16-218 (245)
61 COG1125 OpuBA ABC-type proline 100.0 3.1E-40 6.7E-45 349.3 19.5 208 183-433 13-225 (309)
62 COG1120 FepC ABC-type cobalami 100.0 1.6E-40 3.6E-45 365.1 17.7 211 183-432 14-227 (258)
63 COG3638 ABC-type phosphate/pho 100.0 3.1E-40 6.7E-45 348.0 18.7 221 854-1095 3-235 (258)
64 COG1118 CysA ABC-type sulfate/ 100.0 3.8E-40 8.3E-45 358.5 17.9 206 878-1093 13-223 (345)
65 COG1118 CysA ABC-type sulfate/ 100.0 5.2E-40 1.1E-44 357.4 18.9 224 182-454 13-240 (345)
66 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.9E-39 4.2E-44 354.6 23.1 207 185-433 18-227 (254)
67 COG1136 SalX ABC-type antimicr 100.0 1.6E-39 3.5E-44 350.5 21.8 193 880-1085 18-219 (226)
68 COG1117 PstB ABC-type phosphat 100.0 1.3E-39 2.8E-44 336.9 18.6 217 854-1092 7-232 (253)
69 TIGR01257 rim_protein retinal- 100.0 8.1E-35 1.7E-39 392.5 69.9 216 853-1092 927-1144(2272)
70 COG1116 TauB ABC-type nitrate/ 100.0 2.6E-39 5.6E-44 348.1 19.8 192 184-420 16-207 (248)
71 COG3839 MalK ABC-type sugar tr 100.0 1.5E-39 3.3E-44 370.7 18.8 201 882-1094 18-220 (338)
72 COG1127 Ttg2A ABC-type transpo 100.0 3.7E-39 8E-44 340.7 19.9 210 182-433 19-235 (263)
73 COG2884 FtsE Predicted ATPase 100.0 5E-39 1.1E-43 326.7 19.2 199 880-1091 15-220 (223)
74 COG3638 ABC-type phosphate/pho 100.0 4.1E-39 8.9E-44 339.5 19.1 217 182-433 15-237 (258)
75 COG4555 NatA ABC-type Na+ tran 100.0 2.2E-39 4.8E-44 331.7 15.3 212 178-433 9-222 (245)
76 COG2274 SunT ABC-type bacterio 100.0 8.4E-39 1.8E-43 400.9 23.7 207 185-433 487-696 (709)
77 PRK13537 nodulation ABC transp 100.0 2.5E-38 5.5E-43 367.5 25.8 214 854-1092 7-222 (306)
78 COG3842 PotA ABC-type spermidi 100.0 3.8E-39 8.2E-44 369.4 18.2 206 877-1093 15-222 (352)
79 COG1136 SalX ABC-type antimicr 100.0 2.8E-38 6.1E-43 340.9 22.4 195 184-422 18-220 (226)
80 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-38 4.1E-43 319.4 18.1 201 189-432 17-218 (231)
81 TIGR02314 ABC_MetN D-methionin 100.0 9.2E-38 2E-42 365.4 25.1 217 855-1092 2-225 (343)
82 COG1117 PstB ABC-type phosphat 100.0 2.1E-38 4.5E-43 327.9 17.0 222 183-452 19-248 (253)
83 PRK11650 ugpC glycerol-3-phosp 100.0 6.3E-38 1.4E-42 369.9 23.4 206 184-432 17-223 (356)
84 KOG0057 Mitochondrial Fe/S clu 100.0 9.8E-38 2.1E-42 362.0 24.0 229 129-433 343-574 (591)
85 TIGR02314 ABC_MetN D-methionin 100.0 2.1E-37 4.5E-42 362.4 26.7 206 184-432 18-229 (343)
86 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-37 3.8E-42 348.8 24.2 202 880-1092 13-221 (235)
87 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-37 3.1E-42 366.5 24.3 207 184-433 17-224 (353)
88 COG1137 YhbG ABC-type (unclass 100.0 1.4E-38 2.9E-43 325.6 13.5 210 874-1093 11-224 (243)
89 PRK11432 fbpC ferric transport 100.0 1.6E-37 3.4E-42 365.4 24.3 206 184-432 19-225 (351)
90 TIGR03265 PhnT2 putative 2-ami 100.0 2.1E-37 4.5E-42 365.1 24.6 215 854-1093 4-220 (353)
91 TIGR01188 drrA daunorubicin re 100.0 2.1E-37 4.5E-42 360.2 23.5 202 879-1092 5-208 (302)
92 TIGR01186 proV glycine betaine 100.0 3.2E-37 6.8E-42 362.6 24.9 208 183-433 5-219 (363)
93 PRK11432 fbpC ferric transport 100.0 3.1E-37 6.7E-42 362.9 24.8 215 854-1093 6-222 (351)
94 PRK11650 ugpC glycerol-3-phosp 100.0 2E-37 4.3E-42 365.7 23.1 215 855-1093 4-220 (356)
95 KOG0058 Peptide exporter, ABC 100.0 3.1E-36 6.6E-41 361.9 33.5 223 845-1092 455-686 (716)
96 TIGR03258 PhnT 2-aminoethylpho 100.0 4E-37 8.6E-42 363.0 24.9 215 854-1093 5-224 (362)
97 PRK13537 nodulation ABC transp 100.0 5.9E-37 1.3E-41 356.0 25.6 206 184-433 20-227 (306)
98 PRK13536 nodulation factor exp 100.0 3.5E-37 7.5E-42 361.4 23.8 214 854-1092 41-256 (340)
99 PRK09452 potA putrescine/sperm 100.0 4.1E-37 8.8E-42 364.2 24.4 218 184-452 27-245 (375)
100 TIGR03258 PhnT 2-aminoethylpho 100.0 4.3E-37 9.4E-42 362.7 24.3 206 184-432 18-227 (362)
101 COG1122 CbiO ABC-type cobalt t 100.0 2.2E-37 4.8E-42 341.2 20.1 214 855-1092 4-223 (235)
102 COG1124 DppF ABC-type dipeptid 100.0 1.4E-37 3.1E-42 330.9 17.6 216 855-1093 4-227 (252)
103 TIGR00960 3a0501s02 Type II (G 100.0 4.9E-37 1.1E-41 340.7 22.6 208 855-1085 2-215 (216)
104 COG4988 CydD ABC-type transpor 100.0 5.1E-37 1.1E-41 362.8 23.6 206 185-433 335-543 (559)
105 cd03259 ABC_Carb_Solutes_like 100.0 6.1E-37 1.3E-41 339.1 21.8 199 880-1090 13-213 (213)
106 cd03269 ABC_putative_ATPase Th 100.0 1E-36 2.2E-41 336.6 23.4 198 880-1090 13-210 (210)
107 TIGR01288 nodI ATP-binding ABC 100.0 1.3E-36 2.8E-41 353.7 25.5 214 854-1092 4-219 (303)
108 TIGR01186 proV glycine betaine 100.0 8.2E-37 1.8E-41 359.1 23.9 204 878-1093 4-215 (363)
109 KOG0055 Multidrug/pheromone ex 100.0 2.8E-37 6.1E-42 390.2 21.2 214 178-433 997-1213(1228)
110 cd03293 ABC_NrtD_SsuB_transpor 100.0 1E-36 2.2E-41 339.0 23.2 200 880-1092 17-218 (220)
111 cd03265 ABC_DrrA DrrA is the A 100.0 1.2E-36 2.5E-41 338.6 23.6 201 880-1092 13-216 (220)
112 PRK09452 potA putrescine/sperm 100.0 1.4E-36 3E-41 359.7 25.3 215 854-1093 14-230 (375)
113 PRK11174 cysteine/glutathione 100.0 1.5E-36 3.2E-41 386.0 27.3 207 184-433 363-572 (588)
114 PRK10851 sulfate/thiosulfate t 100.0 9.1E-37 2E-41 359.6 23.0 217 855-1093 3-222 (353)
115 cd03261 ABC_Org_Solvent_Resist 100.0 2.1E-36 4.5E-41 340.0 24.8 207 184-432 13-225 (235)
116 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-37 6.9E-42 310.6 16.0 196 885-1092 17-214 (231)
117 PRK11153 metN DL-methionine tr 100.0 1.8E-36 3.9E-41 357.2 25.2 217 855-1092 2-225 (343)
118 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-36 3.6E-41 335.7 23.2 199 880-1090 13-213 (213)
119 PRK10851 sulfate/thiosulfate t 100.0 1.6E-36 3.5E-41 357.5 24.5 210 184-432 15-225 (353)
120 PRK11607 potG putrescine trans 100.0 1.6E-36 3.4E-41 359.8 24.5 206 184-432 32-238 (377)
121 COG1122 CbiO ABC-type cobalt t 100.0 6.7E-37 1.4E-41 337.4 19.5 207 184-433 17-228 (235)
122 cd03266 ABC_NatA_sodium_export 100.0 1.8E-36 3.8E-41 336.7 23.1 198 881-1090 19-218 (218)
123 COG0410 LivF ABC-type branched 100.0 1.6E-36 3.4E-41 321.0 21.3 207 183-433 15-226 (237)
124 COG0411 LivG ABC-type branched 100.0 5.8E-37 1.3E-41 326.7 18.0 222 181-433 14-239 (250)
125 TIGR01188 drrA daunorubicin re 100.0 1.5E-36 3.3E-41 352.9 23.2 206 184-433 6-213 (302)
126 PRK11000 maltose/maltodextrin 100.0 2.3E-36 5E-41 359.1 24.8 214 855-1093 4-219 (369)
127 PRK11607 potG putrescine trans 100.0 3.4E-36 7.4E-41 357.0 26.1 215 854-1093 19-235 (377)
128 cd03296 ABC_CysA_sulfate_impor 100.0 3.2E-36 6.8E-41 339.3 24.4 216 855-1092 3-221 (239)
129 COG4152 ABC-type uncharacteriz 100.0 8.1E-37 1.8E-41 321.3 17.8 206 875-1093 10-215 (300)
130 COG1124 DppF ABC-type dipeptid 100.0 2.3E-36 4.9E-41 321.8 21.0 204 185-433 21-231 (252)
131 cd03219 ABC_Mj1267_LivG_branch 100.0 2.8E-36 6E-41 339.3 23.1 204 880-1092 13-227 (236)
132 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.1E-36 4.6E-41 336.1 21.8 193 880-1085 17-217 (218)
133 PRK11000 maltose/maltodextrin 100.0 3E-36 6.5E-41 358.1 24.6 206 184-432 16-222 (369)
134 cd03258 ABC_MetN_methionine_tr 100.0 3.6E-36 7.9E-41 337.7 23.9 200 881-1092 19-225 (233)
135 TIGR03522 GldA_ABC_ATP gliding 100.0 2.4E-36 5.1E-41 351.0 23.1 212 855-1092 3-216 (301)
136 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.4E-36 5.2E-41 345.7 22.8 206 875-1092 32-245 (269)
137 cd03234 ABCG_White The White s 100.0 5.6E-36 1.2E-40 334.4 25.0 221 855-1090 4-226 (226)
138 cd03218 ABC_YhbG The ABC trans 100.0 2.8E-36 6E-41 338.5 22.4 201 880-1092 13-217 (232)
139 COG0410 LivF ABC-type branched 100.0 1.4E-36 3.1E-41 321.4 18.7 205 876-1093 12-222 (237)
140 KOG0056 Heavy metal exporter H 100.0 3.8E-37 8.2E-42 347.2 15.2 244 113-433 507-761 (790)
141 COG1137 YhbG ABC-type (unclass 100.0 3.8E-37 8.3E-42 315.0 13.8 210 182-433 15-228 (243)
142 cd03226 ABC_cobalt_CbiO_domain 100.0 1.8E-36 4E-41 333.2 20.2 192 880-1087 13-205 (205)
143 PRK09536 btuD corrinoid ABC tr 100.0 2.2E-36 4.9E-41 359.6 22.2 217 855-1093 4-224 (402)
144 cd03260 ABC_PstB_phosphate_tra 100.0 3.1E-36 6.8E-41 336.8 22.1 202 880-1092 13-224 (227)
145 PRK13637 cbiO cobalt transport 100.0 5.8E-36 1.3E-40 345.3 24.6 218 855-1092 3-229 (287)
146 PRK09493 glnQ glutamine ABC tr 100.0 7.2E-36 1.6E-40 336.7 24.7 202 880-1092 14-220 (240)
147 cd03268 ABC_BcrA_bacitracin_re 100.0 3.2E-36 7E-41 332.1 21.1 195 880-1090 13-208 (208)
148 PRK11629 lolD lipoprotein tran 100.0 9.4E-36 2E-40 334.2 25.1 217 854-1092 5-229 (233)
149 PRK11264 putative amino-acid A 100.0 8.4E-36 1.8E-40 338.4 24.9 214 855-1092 4-228 (250)
150 cd03256 ABC_PhnC_transporter A 100.0 4E-36 8.7E-41 339.2 22.1 204 880-1092 14-229 (241)
151 PRK13536 nodulation factor exp 100.0 5.8E-36 1.3E-40 351.1 24.2 206 184-433 54-261 (340)
152 TIGR02673 FtsE cell division A 100.0 5.4E-36 1.2E-40 331.9 22.6 192 880-1082 15-212 (214)
153 cd03292 ABC_FtsE_transporter F 100.0 5.6E-36 1.2E-40 331.8 22.4 194 880-1085 14-213 (214)
154 PRK11153 metN DL-methionine tr 100.0 7.9E-36 1.7E-40 351.7 24.6 206 184-432 18-229 (343)
155 COG0411 LivG ABC-type branched 100.0 1.7E-36 3.7E-41 323.1 17.0 210 875-1093 12-235 (250)
156 COG1132 MdlB ABC-type multidru 100.0 5.1E-36 1.1E-40 379.0 24.2 209 183-433 341-552 (567)
157 PRK13647 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 341.0 24.2 214 855-1092 5-222 (274)
158 cd03263 ABC_subfamily_A The AB 100.0 7.6E-36 1.7E-40 332.1 22.2 200 880-1092 15-216 (220)
159 PRK11248 tauB taurine transpor 100.0 1.2E-35 2.6E-40 337.0 24.1 200 880-1092 14-215 (255)
160 cd03259 ABC_Carb_Solutes_like 100.0 8.5E-36 1.8E-40 330.0 22.3 200 184-426 13-213 (213)
161 COG2884 FtsE Predicted ATPase 100.0 4.1E-36 8.8E-41 305.6 18.0 205 179-427 10-220 (223)
162 COG2274 SunT ABC-type bacterio 100.0 1.3E-34 2.8E-39 363.2 35.7 216 849-1092 466-691 (709)
163 PRK13651 cobalt transporter AT 100.0 1.2E-35 2.6E-40 344.3 24.4 218 855-1092 3-249 (305)
164 PRK11831 putative ABC transpor 100.0 1.7E-35 3.6E-40 339.0 25.0 215 854-1092 7-228 (269)
165 PRK13634 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 343.2 24.1 218 855-1092 3-230 (290)
166 TIGR02315 ABC_phnC phosphonate 100.0 5.6E-36 1.2E-40 338.4 20.8 204 880-1092 15-230 (243)
167 cd03295 ABC_OpuCA_Osmoprotecti 100.0 9.1E-36 2E-40 336.2 22.5 201 880-1092 14-220 (242)
168 cd03265 ABC_DrrA DrrA is the A 100.0 1.2E-35 2.7E-40 330.4 23.0 205 184-431 13-219 (220)
169 cd03296 ABC_CysA_sulfate_impor 100.0 1.5E-35 3.3E-40 333.8 24.0 210 184-432 15-225 (239)
170 PRK13643 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 341.9 24.7 218 855-1093 2-229 (288)
171 cd03264 ABC_drug_resistance_li 100.0 1.2E-35 2.6E-40 328.4 22.7 197 880-1090 13-211 (211)
172 cd03262 ABC_HisP_GlnQ_permease 100.0 1E-35 2.2E-40 329.5 22.1 195 880-1085 13-212 (213)
173 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.5E-35 3.3E-40 339.1 24.2 208 182-432 35-249 (269)
174 PRK13637 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 341.5 24.5 218 184-444 20-248 (287)
175 PRK10908 cell division protein 100.0 1.8E-35 3.9E-40 329.5 23.8 196 880-1087 15-216 (222)
176 PRK13631 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 345.3 24.1 218 854-1092 21-260 (320)
177 cd03258 ABC_MetN_methionine_tr 100.0 1.2E-35 2.7E-40 333.4 22.4 205 185-432 19-229 (233)
178 cd03224 ABC_TM1139_LivF_branch 100.0 8.9E-36 1.9E-40 332.1 21.0 199 880-1092 13-216 (222)
179 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.7E-35 5.8E-40 331.1 24.9 200 880-1092 14-216 (236)
180 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.7E-35 3.7E-40 329.2 23.0 201 184-429 17-219 (220)
181 PRK10619 histidine/lysine/argi 100.0 3E-35 6.5E-40 335.0 25.5 215 854-1092 5-236 (257)
182 PRK13650 cbiO cobalt transport 100.0 3.6E-35 7.7E-40 337.6 26.3 216 184-443 20-242 (279)
183 cd03257 ABC_NikE_OppD_transpor 100.0 2E-35 4.3E-40 330.7 23.4 200 881-1090 19-228 (228)
184 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-35 2.5E-40 328.6 21.2 192 880-1082 14-209 (211)
185 COG4559 ABC-type hemin transpo 100.0 9.4E-36 2E-40 307.4 19.0 217 855-1094 2-227 (259)
186 TIGR01288 nodI ATP-binding ABC 100.0 1.7E-35 3.7E-40 344.3 23.7 206 184-433 17-224 (303)
187 TIGR00972 3a0107s01c2 phosphat 100.0 3E-35 6.4E-40 333.1 24.8 202 880-1092 14-227 (247)
188 PRK13646 cbiO cobalt transport 100.0 2E-35 4.3E-40 340.9 23.8 217 855-1092 3-230 (286)
189 cd03235 ABC_Metallic_Cations A 100.0 9.2E-36 2E-40 329.7 20.2 199 880-1090 12-213 (213)
190 PRK13650 cbiO cobalt transport 100.0 1.8E-35 3.8E-40 340.1 23.3 216 854-1092 4-224 (279)
191 cd03219 ABC_Mj1267_LivG_branch 100.0 2.6E-35 5.5E-40 331.5 24.1 215 184-432 13-231 (236)
192 PRK13636 cbiO cobalt transport 100.0 2.7E-35 5.9E-40 339.3 24.6 216 854-1093 5-227 (283)
193 PRK13643 cbiO cobalt transport 100.0 4.5E-35 9.8E-40 338.1 26.5 223 185-452 20-255 (288)
194 cd03256 ABC_PhnC_transporter A 100.0 2.1E-35 4.5E-40 333.4 23.0 214 184-432 14-233 (241)
195 PRK10895 lipopolysaccharide AB 100.0 1.7E-35 3.7E-40 333.9 22.1 214 855-1092 4-221 (241)
196 cd03301 ABC_MalK_N The N-termi 100.0 2.4E-35 5.1E-40 326.5 22.8 200 184-426 13-213 (213)
197 PRK15079 oligopeptide ABC tran 100.0 4.1E-35 8.9E-40 343.0 25.9 229 854-1092 8-246 (331)
198 PRK00635 excinuclease ABC subu 100.0 7.1E-34 1.5E-38 377.6 40.8 135 951-1093 759-902 (1809)
199 PRK11247 ssuB aliphatic sulfon 100.0 2.3E-35 4.9E-40 334.2 22.9 206 854-1092 12-218 (257)
200 TIGR03522 GldA_ABC_ATP gliding 100.0 2.5E-35 5.4E-40 342.4 23.7 205 184-433 15-221 (301)
201 TIGR02211 LolD_lipo_ex lipopro 100.0 3.2E-35 7E-40 327.3 23.5 195 880-1087 18-220 (221)
202 PRK00349 uvrA excinuclease ABC 100.0 7.3E-34 1.6E-38 365.2 39.2 123 954-1092 791-922 (943)
203 PRK10070 glycine betaine trans 100.0 3.2E-35 6.8E-40 349.5 24.7 207 183-432 40-253 (400)
204 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.2E-35 9.1E-40 378.5 27.9 205 184-433 466-673 (686)
205 PRK13634 cbiO cobalt transport 100.0 2.6E-35 5.6E-40 340.5 23.2 218 184-444 20-249 (290)
206 TIGR03005 ectoine_ehuA ectoine 100.0 4.1E-35 8.9E-40 333.0 24.3 202 880-1092 13-231 (252)
207 cd03218 ABC_YhbG The ABC trans 100.0 3.4E-35 7.4E-40 329.6 23.2 205 184-432 13-221 (232)
208 PRK11124 artP arginine transpo 100.0 4.6E-35 9.9E-40 330.6 24.4 213 855-1092 3-225 (242)
209 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.3E-35 7.2E-40 331.7 23.1 206 184-432 14-224 (242)
210 TIGR00960 3a0501s02 Type II (G 100.0 1.3E-35 2.9E-40 329.2 19.5 195 184-422 16-216 (216)
211 PRK13644 cbiO cobalt transport 100.0 3.6E-35 7.7E-40 336.7 23.3 200 880-1092 15-219 (274)
212 PRK13641 cbiO cobalt transport 100.0 4.6E-35 1E-39 338.1 24.4 218 855-1092 3-229 (287)
213 cd03263 ABC_subfamily_A The AB 100.0 2.3E-35 5E-40 328.3 21.0 203 184-431 15-219 (220)
214 TIGR02315 ABC_phnC phosphonate 100.0 2.5E-35 5.3E-40 333.2 21.6 213 184-431 15-233 (243)
215 COG4618 ArpD ABC-type protease 100.0 2.2E-35 4.8E-40 338.9 21.2 237 126-435 323-562 (580)
216 PRK11614 livF leucine/isoleuci 100.0 3.3E-35 7.2E-40 330.7 22.4 212 854-1092 5-221 (237)
217 PRK11300 livG leucine/isoleuci 100.0 4.8E-35 1E-39 333.2 23.9 218 854-1093 5-239 (255)
218 PRK13647 cbiO cobalt transport 100.0 4.3E-35 9.2E-40 336.1 23.6 204 184-431 18-225 (274)
219 PRK14247 phosphate ABC transpo 100.0 6.8E-35 1.5E-39 330.8 25.1 216 855-1092 4-229 (250)
220 TIGR03740 galliderm_ABC gallid 100.0 3.9E-35 8.6E-40 327.0 22.6 197 880-1093 13-209 (223)
221 cd03224 ABC_TM1139_LivF_branch 100.0 4.4E-35 9.6E-40 326.5 22.9 203 184-432 13-220 (222)
222 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.3E-35 4.9E-40 327.8 20.4 195 184-422 17-218 (218)
223 TIGR01978 sufC FeS assembly AT 100.0 6.1E-35 1.3E-39 330.0 24.2 207 880-1092 13-229 (243)
224 PRK14267 phosphate ABC transpo 100.0 7.1E-35 1.5E-39 331.3 24.8 217 854-1092 4-232 (253)
225 PRK14273 phosphate ABC transpo 100.0 7.7E-35 1.7E-39 331.1 25.1 215 854-1092 7-233 (254)
226 PRK14268 phosphate ABC transpo 100.0 8.2E-35 1.8E-39 331.5 25.3 214 854-1092 12-237 (258)
227 TIGR03415 ABC_choXWV_ATP choli 100.0 5E-35 1.1E-39 345.3 24.1 208 182-432 35-253 (382)
228 PRK13652 cbiO cobalt transport 100.0 7.3E-35 1.6E-39 334.9 24.5 214 855-1092 4-222 (277)
229 COG4559 ABC-type hemin transpo 100.0 3.4E-35 7.4E-40 303.3 19.3 208 184-433 14-230 (259)
230 PRK13631 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 338.3 26.1 216 184-444 39-279 (320)
231 PRK13548 hmuV hemin importer A 100.0 6.7E-35 1.4E-39 331.9 23.8 213 855-1092 3-225 (258)
232 PRK10070 glycine betaine trans 100.0 4.4E-35 9.6E-40 348.2 23.2 202 879-1092 40-249 (400)
233 cd03269 ABC_putative_ATPase Th 100.0 4E-35 8.6E-40 323.9 20.9 198 184-426 13-210 (210)
234 PRK11629 lolD lipoprotein tran 100.0 9E-35 1.9E-39 326.3 23.9 201 184-428 22-229 (233)
235 PRK13635 cbiO cobalt transport 100.0 7.6E-35 1.6E-39 334.7 23.8 214 855-1092 6-224 (279)
236 PRK13638 cbiO cobalt transport 100.0 7.4E-35 1.6E-39 334.1 23.6 201 880-1092 14-220 (271)
237 cd03260 ABC_PstB_phosphate_tra 100.0 5.3E-35 1.1E-39 327.0 21.8 204 184-430 13-226 (227)
238 PRK09536 btuD corrinoid ABC tr 100.0 7E-35 1.5E-39 346.8 24.1 209 184-432 16-227 (402)
239 KOG0062 ATPase component of AB 100.0 5.1E-35 1.1E-39 336.0 21.9 204 851-1091 359-563 (582)
240 PRK14241 phosphate transporter 100.0 1.2E-34 2.7E-39 330.1 25.1 216 855-1092 5-237 (258)
241 cd03226 ABC_cobalt_CbiO_domain 100.0 4.1E-35 8.9E-40 322.5 20.4 192 184-423 13-205 (205)
242 PRK13635 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 332.3 25.8 216 184-443 20-242 (279)
243 PRK09984 phosphonate/organopho 100.0 9.4E-35 2E-39 331.9 24.1 220 854-1093 4-238 (262)
244 cd03298 ABC_ThiQ_thiamine_tran 100.0 6E-35 1.3E-39 322.7 21.8 194 885-1090 16-211 (211)
245 TIGR03411 urea_trans_UrtD urea 100.0 9E-35 1.9E-39 328.3 23.6 203 880-1092 15-226 (242)
246 TIGR03415 ABC_choXWV_ATP choli 100.0 6.9E-35 1.5E-39 344.1 23.6 205 877-1093 34-250 (382)
247 PRK13646 cbiO cobalt transport 100.0 1.3E-34 2.8E-39 334.2 25.3 205 184-432 20-234 (286)
248 PRK11231 fecE iron-dicitrate t 100.0 7.8E-35 1.7E-39 331.2 23.2 217 855-1093 3-223 (255)
249 COG1245 Predicted ATPase, RNas 100.0 3.7E-34 8.1E-39 323.2 28.0 173 883-1081 357-530 (591)
250 PRK11831 putative ABC transpor 100.0 1.3E-34 2.9E-39 331.5 24.8 207 184-432 20-232 (269)
251 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.6E-35 1.2E-39 379.0 24.5 206 184-433 492-700 (710)
252 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.5E-34 3.2E-39 325.1 24.6 206 184-433 14-221 (236)
253 cd03268 ABC_BcrA_bacitracin_re 100.0 6.6E-35 1.4E-39 321.7 21.3 195 184-426 13-208 (208)
254 PRK10575 iron-hydroxamate tran 100.0 9.7E-35 2.1E-39 332.0 23.3 218 854-1093 11-233 (265)
255 PRK10253 iron-enterobactin tra 100.0 1E-34 2.2E-39 331.8 23.5 219 853-1093 6-229 (265)
256 cd03234 ABCG_White The White s 100.0 9.6E-35 2.1E-39 324.5 22.7 204 183-426 19-226 (226)
257 TIGR03375 type_I_sec_LssB type 100.0 9.8E-35 2.1E-39 375.6 26.0 208 184-433 478-688 (694)
258 PRK14242 phosphate transporter 100.0 1.9E-34 4.1E-39 327.8 25.2 221 852-1092 4-232 (253)
259 PRK11176 lipid transporter ATP 100.0 1.1E-34 2.5E-39 368.6 26.1 209 184-433 356-567 (582)
260 COG4988 CydD ABC-type transpor 100.0 3.3E-35 7.2E-40 347.5 19.4 214 851-1093 317-539 (559)
261 PRK13649 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 333.4 24.4 217 855-1092 3-229 (280)
262 TIGR00958 3a01208 Conjugate Tr 100.0 1E-34 2.2E-39 374.8 25.5 206 184-433 494-702 (711)
263 PRK10744 pstB phosphate transp 100.0 1.8E-34 4E-39 328.9 24.7 218 851-1092 10-239 (260)
264 PRK15079 oligopeptide ABC tran 100.0 1.7E-34 3.7E-39 337.8 24.9 209 183-432 33-250 (331)
265 PRK10584 putative ABC transpor 100.0 2E-34 4.4E-39 322.5 24.5 213 854-1088 6-226 (228)
266 COG4525 TauB ABC-type taurine 100.0 4.9E-35 1.1E-39 297.5 17.6 201 880-1093 18-220 (259)
267 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-34 2.7E-39 326.6 22.9 205 184-432 14-224 (240)
268 PRK14245 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 326.2 25.4 219 854-1092 3-229 (250)
269 PRK10790 putative multidrug tr 100.0 1.7E-34 3.6E-39 367.4 26.9 206 185-433 355-563 (592)
270 TIGR02769 nickel_nikE nickel i 100.0 1.7E-34 3.7E-39 330.0 24.3 223 855-1092 3-235 (265)
271 TIGR01184 ntrCD nitrate transp 100.0 8.8E-35 1.9E-39 325.3 21.4 198 883-1092 1-199 (230)
272 cd03233 ABC_PDR_domain1 The pl 100.0 1.6E-34 3.4E-39 316.6 23.0 196 854-1090 3-202 (202)
273 PRK11308 dppF dipeptide transp 100.0 2.1E-34 4.5E-39 336.8 25.5 226 854-1093 5-240 (327)
274 PRK13639 cbiO cobalt transport 100.0 1.8E-34 3.9E-39 331.3 24.4 214 855-1092 2-221 (275)
275 COG4175 ProV ABC-type proline/ 100.0 3.5E-35 7.6E-40 319.3 17.2 222 183-455 40-268 (386)
276 TIGR03873 F420-0_ABC_ATP propo 100.0 1.3E-34 2.8E-39 329.5 22.8 205 880-1093 14-222 (256)
277 TIGR01193 bacteriocin_ABC ABC- 100.0 1.1E-34 2.5E-39 375.8 25.3 208 184-433 487-697 (708)
278 cd03267 ABC_NatA_like Similar 100.0 1.6E-34 3.6E-39 324.4 23.2 201 878-1090 32-236 (236)
279 cd03233 ABC_PDR_domain1 The pl 100.0 2.4E-34 5.2E-39 315.2 23.9 183 182-426 18-202 (202)
280 PRK11022 dppD dipeptide transp 100.0 2.8E-34 6.1E-39 336.0 25.9 220 855-1092 4-238 (326)
281 TIGR03608 L_ocin_972_ABC putat 100.0 1.2E-34 2.5E-39 319.3 21.3 189 880-1080 11-206 (206)
282 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-34 4.8E-39 322.8 23.9 201 880-1092 13-215 (232)
283 PRK13636 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 334.2 22.1 207 184-433 19-231 (283)
284 cd03267 ABC_NatA_like Similar 100.0 2.4E-34 5.2E-39 323.1 24.2 202 182-426 32-236 (236)
285 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.9E-33 4.2E-38 363.1 36.1 209 853-1092 450-668 (686)
286 cd03266 ABC_NatA_sodium_export 100.0 9.6E-35 2.1E-39 322.8 20.7 198 185-426 19-218 (218)
287 PRK11160 cysteine/glutathione 100.0 2E-34 4.4E-39 363.9 26.4 207 184-433 353-562 (574)
288 COG4987 CydC ABC-type transpor 100.0 4.3E-35 9.2E-40 340.1 18.4 209 183-433 350-561 (573)
289 cd03232 ABC_PDR_domain2 The pl 100.0 1.8E-34 3.9E-39 313.7 22.3 190 854-1090 3-192 (192)
290 PRK13632 cbiO cobalt transport 100.0 1.9E-34 4.2E-39 330.5 23.7 215 854-1092 7-226 (271)
291 cd03292 ABC_FtsE_transporter F 100.0 9.7E-35 2.1E-39 321.9 20.5 195 184-422 14-214 (214)
292 PRK13632 cbiO cobalt transport 100.0 3.4E-34 7.3E-39 328.5 25.6 205 184-432 22-230 (271)
293 PRK13651 cobalt transporter AT 100.0 1.4E-34 2.9E-39 335.5 22.4 205 184-432 20-253 (305)
294 PRK14235 phosphate transporter 100.0 3.2E-34 6.8E-39 328.0 25.2 216 854-1092 19-246 (267)
295 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-34 3.8E-39 319.4 22.3 198 882-1091 13-212 (213)
296 PRK09473 oppD oligopeptide tra 100.0 2.9E-34 6.2E-39 336.1 25.3 225 854-1093 12-247 (330)
297 PRK13640 cbiO cobalt transport 100.0 1.9E-34 4.2E-39 332.1 23.4 217 854-1092 5-227 (282)
298 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-34 2.4E-39 324.9 20.9 199 880-1093 13-217 (230)
299 PRK13547 hmuV hemin importer A 100.0 1.9E-34 4.1E-39 329.5 23.0 207 880-1093 14-240 (272)
300 PRK11264 putative amino-acid A 100.0 2.2E-34 4.7E-39 326.8 23.4 205 184-432 16-232 (250)
301 PRK13549 xylose transporter AT 100.0 1.6E-34 3.6E-39 359.9 24.5 221 854-1094 5-229 (506)
302 PRK14237 phosphate transporter 100.0 4.1E-34 9E-39 327.0 25.7 224 849-1092 15-246 (267)
303 PRK13648 cbiO cobalt transport 100.0 2.9E-34 6.4E-39 328.8 24.5 216 854-1093 7-227 (269)
304 PRK13633 cobalt transporter AT 100.0 2.2E-34 4.8E-39 331.4 23.4 218 855-1092 5-228 (280)
305 TIGR00630 uvra excinuclease AB 100.0 4.6E-33 9.9E-38 357.3 37.8 123 954-1092 789-920 (924)
306 PRK13645 cbiO cobalt transport 100.0 2.4E-34 5.2E-39 332.8 23.5 219 854-1092 6-235 (289)
307 cd03257 ABC_NikE_OppD_transpor 100.0 2.3E-34 5.1E-39 322.0 22.6 201 185-426 19-228 (228)
308 PRK10895 lipopolysaccharide AB 100.0 2.3E-34 4.9E-39 324.8 22.6 206 184-432 16-225 (241)
309 TIGR02673 FtsE cell division A 100.0 1.4E-34 3E-39 320.6 20.5 194 184-421 15-214 (214)
310 PRK13648 cbiO cobalt transport 100.0 7.5E-34 1.6E-38 325.5 27.2 204 185-432 23-230 (269)
311 TIGR03410 urea_trans_UrtE urea 100.0 2.3E-34 5.1E-39 322.4 22.5 202 184-431 13-219 (230)
312 PRK13652 cbiO cobalt transport 100.0 2.1E-34 4.5E-39 331.1 22.6 205 185-432 18-226 (277)
313 PRK11144 modC molybdate transp 100.0 2E-34 4.4E-39 341.0 23.1 195 189-432 16-217 (352)
314 PRK09473 oppD oligopeptide tra 100.0 8.2E-34 1.8E-38 332.3 27.9 214 184-433 29-251 (330)
315 PRK14259 phosphate ABC transpo 100.0 3.4E-34 7.4E-39 327.9 24.1 215 853-1092 12-248 (269)
316 cd03297 ABC_ModC_molybdenum_tr 100.0 2.4E-34 5.2E-39 318.6 22.1 196 878-1090 11-214 (214)
317 PRK14269 phosphate ABC transpo 100.0 2.6E-34 5.6E-39 325.1 22.8 215 855-1092 3-225 (246)
318 COG4181 Predicted ABC-type tra 100.0 1.4E-34 3E-39 288.3 17.9 200 876-1088 19-226 (228)
319 cd03299 ABC_ModC_like Archeal 100.0 3.6E-34 7.8E-39 321.6 23.6 199 882-1092 14-214 (235)
320 PRK14250 phosphate ABC transpo 100.0 2.5E-34 5.5E-39 324.1 22.4 208 855-1092 4-216 (241)
321 TIGR02211 LolD_lipo_ex lipopro 100.0 2.8E-34 6.1E-39 319.7 22.3 196 184-423 18-220 (221)
322 KOG0057 Mitochondrial Fe/S clu 100.0 8E-35 1.7E-39 337.9 18.4 212 851-1092 348-569 (591)
323 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-34 6E-39 325.4 22.5 194 185-429 26-219 (257)
324 PRK14256 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 323.5 25.2 220 854-1092 4-231 (252)
325 PRK11248 tauB taurine transpor 100.0 3.9E-34 8.4E-39 324.7 23.6 201 184-429 14-216 (255)
326 TIGR02142 modC_ABC molybdenum 100.0 2.2E-34 4.8E-39 341.2 22.4 194 885-1092 15-216 (354)
327 PRK15093 antimicrobial peptide 100.0 5.2E-34 1.1E-38 334.8 25.2 222 855-1092 4-243 (330)
328 PRK13644 cbiO cobalt transport 100.0 2.2E-34 4.8E-39 330.2 21.6 204 184-432 15-223 (274)
329 PRK11022 dppD dipeptide transp 100.0 9E-34 2E-38 331.7 26.8 211 184-433 20-243 (326)
330 TIGR00968 3a0106s01 sulfate AB 100.0 3.5E-34 7.5E-39 322.1 22.3 201 880-1092 13-215 (237)
331 PRK13548 hmuV hemin importer A 100.0 4.6E-34 1E-38 325.0 23.6 206 184-432 15-229 (258)
332 PRK11614 livF leucine/isoleuci 100.0 3.4E-34 7.3E-39 322.5 22.2 203 184-432 18-225 (237)
333 cd03264 ABC_drug_resistance_li 100.0 2.1E-34 4.5E-39 318.4 20.2 197 184-426 13-211 (211)
334 PTZ00265 multidrug resistance 100.0 1.9E-34 4E-39 391.5 24.0 214 183-433 1180-1452(1466)
335 TIGR02142 modC_ABC molybdenum 100.0 4.7E-34 1E-38 338.4 24.4 199 189-432 15-220 (354)
336 TIGR02769 nickel_nikE nickel i 100.0 4.4E-34 9.4E-39 326.7 23.1 208 183-432 23-239 (265)
337 PRK15112 antimicrobial peptide 100.0 4.2E-34 9.2E-39 327.0 23.0 223 855-1092 5-234 (267)
338 TIGR03005 ectoine_ehuA ectoine 100.0 6.3E-34 1.4E-38 323.2 24.1 206 184-432 13-235 (252)
339 PRK10771 thiQ thiamine transpo 100.0 3.5E-34 7.6E-39 321.2 21.7 196 885-1092 17-214 (232)
340 PRK11144 modC molybdate transp 100.0 2.7E-34 5.9E-39 339.9 21.9 191 885-1093 16-214 (352)
341 PRK14270 phosphate ABC transpo 100.0 8.5E-34 1.8E-38 322.0 25.0 215 854-1092 4-230 (251)
342 TIGR02770 nickel_nikD nickel i 100.0 4.1E-34 8.8E-39 320.2 22.1 201 882-1092 1-210 (230)
343 PRK13640 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 325.5 26.6 209 184-433 20-232 (282)
344 PRK14239 phosphate transporter 100.0 7.5E-34 1.6E-38 322.8 24.5 215 854-1092 5-231 (252)
345 PRK14274 phosphate ABC transpo 100.0 7.7E-34 1.7E-38 323.8 24.6 219 854-1092 12-238 (259)
346 TIGR00972 3a0107s01c2 phosphat 100.0 7.4E-34 1.6E-38 321.7 24.3 206 185-432 15-231 (247)
347 COG4175 ProV ABC-type proline/ 100.0 7.8E-35 1.7E-39 316.7 15.5 201 881-1093 42-250 (386)
348 TIGR02770 nickel_nikD nickel i 100.0 4.1E-34 8.8E-39 320.2 21.9 204 186-432 1-214 (230)
349 PRK13641 cbiO cobalt transport 100.0 3.8E-34 8.3E-39 330.4 22.3 205 184-432 20-233 (287)
350 PRK14257 phosphate ABC transpo 100.0 7.7E-34 1.7E-38 332.0 25.1 221 854-1092 80-308 (329)
351 PRK10908 cell division protein 100.0 3.6E-34 7.7E-39 319.1 21.2 196 184-423 15-216 (222)
352 PRK13633 cobalt transporter AT 100.0 5.7E-34 1.2E-38 328.0 23.5 206 184-433 23-233 (280)
353 PRK14273 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 321.6 25.6 206 185-432 21-237 (254)
354 PRK11300 livG leucine/isoleuci 100.0 6.6E-34 1.4E-38 323.8 23.7 221 184-432 18-242 (255)
355 TIGR01184 ntrCD nitrate transp 100.0 4.7E-34 1E-38 319.5 22.0 202 187-431 1-202 (230)
356 PRK14260 phosphate ABC transpo 100.0 8.5E-34 1.8E-38 323.3 24.5 216 854-1092 7-238 (259)
357 cd03213 ABCG_EPDR ABCG transpo 100.0 7.3E-34 1.6E-38 309.3 22.8 190 854-1090 3-194 (194)
358 PRK13642 cbiO cobalt transport 100.0 6.9E-34 1.5E-38 326.8 23.9 216 854-1092 4-224 (277)
359 TIGR03740 galliderm_ABC gallid 100.0 7.7E-34 1.7E-38 316.6 23.4 198 184-430 13-210 (223)
360 PRK14240 phosphate transporter 100.0 1E-33 2.2E-38 321.2 24.8 215 854-1092 3-229 (250)
361 PRK13639 cbiO cobalt transport 100.0 6.7E-34 1.5E-38 326.6 23.4 205 184-432 15-225 (275)
362 TIGR03411 urea_trans_UrtD urea 100.0 7.6E-34 1.7E-38 320.7 23.5 212 184-432 15-230 (242)
363 PRK14262 phosphate ABC transpo 100.0 1E-33 2.2E-38 321.3 24.6 218 855-1092 4-229 (250)
364 PRK11308 dppF dipeptide transp 100.0 1E-33 2.2E-38 331.1 25.2 208 184-433 28-244 (327)
365 PRK14244 phosphate ABC transpo 100.0 6.2E-34 1.3E-38 323.1 22.8 207 880-1092 18-232 (251)
366 PRK14253 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 320.7 24.8 219 854-1092 3-228 (249)
367 cd03300 ABC_PotA_N PotA is an 100.0 9.5E-34 2.1E-38 317.7 23.8 206 184-432 13-219 (232)
368 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.1E-33 1.8E-37 358.9 36.2 210 853-1092 476-695 (710)
369 TIGR02982 heterocyst_DevA ABC 100.0 1E-33 2.2E-38 314.9 23.8 195 880-1086 18-219 (220)
370 PRK10762 D-ribose transporter 100.0 5.6E-34 1.2E-38 354.8 24.1 218 855-1094 5-227 (501)
371 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.6E-34 1.6E-38 316.3 22.6 195 875-1090 30-224 (224)
372 TIGR01193 bacteriocin_ABC ABC- 100.0 9.6E-33 2.1E-37 357.8 36.2 211 853-1092 472-692 (708)
373 PRK10619 histidine/lysine/argi 100.0 7.2E-34 1.6E-38 323.6 22.5 205 184-432 18-240 (257)
374 PRK14250 phosphate ABC transpo 100.0 8.6E-34 1.9E-38 319.8 22.9 201 184-432 16-220 (241)
375 PRK13649 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 325.8 24.6 204 184-432 20-233 (280)
376 PRK11174 cysteine/glutathione 100.0 2.7E-34 5.8E-39 365.4 21.2 210 853-1092 348-567 (588)
377 COG0444 DppD ABC-type dipeptid 100.0 1.2E-33 2.5E-38 314.6 23.4 210 879-1093 17-239 (316)
378 PRK14268 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.5 23.5 206 184-432 25-241 (258)
379 KOG0066 eIF2-interacting prote 100.0 1.6E-33 3.5E-38 313.5 24.5 202 852-1093 584-787 (807)
380 PRK14257 phosphate ABC transpo 100.0 2.1E-33 4.5E-38 328.4 26.7 211 184-432 95-312 (329)
381 PRK14242 phosphate transporter 100.0 2E-33 4.3E-38 319.4 25.9 206 185-432 20-236 (253)
382 PRK13642 cbiO cobalt transport 100.0 2.1E-33 4.5E-38 322.8 26.3 205 184-432 20-228 (277)
383 cd03299 ABC_ModC_like Archeal 100.0 1.2E-33 2.7E-38 317.3 23.7 204 186-432 14-218 (235)
384 PRK14258 phosphate ABC transpo 100.0 1.6E-33 3.4E-38 321.4 24.9 221 854-1092 7-240 (261)
385 COG4525 TauB ABC-type taurine 100.0 7.1E-34 1.5E-38 289.1 19.5 205 184-433 18-224 (259)
386 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.5E-34 1.6E-38 314.0 21.6 195 189-426 16-211 (211)
387 PRK10418 nikD nickel transport 100.0 1.3E-33 2.9E-38 320.7 24.1 214 853-1092 3-225 (254)
388 PRK14236 phosphate transporter 100.0 1.8E-33 3.9E-38 322.7 25.3 216 853-1092 24-251 (272)
389 PRK10584 putative ABC transpor 100.0 1.1E-33 2.3E-38 316.6 22.9 198 184-425 23-227 (228)
390 PRK10575 iron-hydroxamate tran 100.0 7.5E-34 1.6E-38 324.7 22.1 210 184-432 24-236 (265)
391 cd03225 ABC_cobalt_CbiO_domain 100.0 6.3E-34 1.4E-38 314.6 20.6 194 184-421 14-211 (211)
392 PRK14272 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 319.4 25.0 216 854-1092 4-231 (252)
393 PRK13657 cyclic beta-1,2-gluca 100.0 1.3E-33 2.8E-38 358.7 26.3 207 185-433 349-558 (588)
394 PRK14271 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 322.2 25.5 219 854-1092 21-246 (276)
395 PRK11124 artP arginine transpo 100.0 6.3E-34 1.4E-38 321.4 20.8 204 184-431 15-228 (242)
396 PRK14247 phosphate ABC transpo 100.0 1.6E-33 3.6E-38 319.6 24.3 209 184-432 16-233 (250)
397 PRK11701 phnK phosphonate C-P 100.0 1.4E-33 3E-38 321.5 23.8 215 854-1092 6-236 (258)
398 PRK10253 iron-enterobactin tra 100.0 8.8E-34 1.9E-38 324.1 22.0 210 184-432 20-232 (265)
399 PRK09700 D-allose transporter 100.0 7.9E-34 1.7E-38 354.4 23.6 219 854-1094 5-231 (510)
400 PRK13538 cytochrome c biogenes 100.0 8.1E-34 1.8E-38 311.8 20.8 187 880-1080 14-202 (204)
401 TIGR00968 3a0106s01 sulfate AB 100.0 1.6E-33 3.5E-38 316.7 23.6 206 184-432 13-219 (237)
402 PRK09984 phosphonate/organopho 100.0 1.1E-33 2.4E-38 323.0 22.5 216 184-431 17-240 (262)
403 PRK15112 antimicrobial peptide 100.0 1.6E-33 3.4E-38 322.3 23.7 207 184-432 26-238 (267)
404 PRK13543 cytochrome c biogenes 100.0 1.3E-33 2.9E-38 312.3 22.4 201 854-1081 11-211 (214)
405 PRK13638 cbiO cobalt transport 100.0 1.6E-33 3.4E-38 323.1 23.7 205 184-432 14-224 (271)
406 PRK14248 phosphate ABC transpo 100.0 2.1E-33 4.5E-38 321.7 24.7 215 854-1092 21-247 (268)
407 PRK14275 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 323.8 24.9 215 854-1092 39-265 (286)
408 PRK14249 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 318.6 24.6 219 854-1092 4-230 (251)
409 cd03235 ABC_Metallic_Cations A 100.0 7.5E-34 1.6E-38 314.4 20.2 200 184-426 12-213 (213)
410 PRK11231 fecE iron-dicitrate t 100.0 1.1E-33 2.4E-38 321.8 22.0 209 184-432 15-226 (255)
411 PRK14261 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 319.1 24.3 215 854-1092 6-232 (253)
412 PRK10771 thiQ thiamine transpo 100.0 1.7E-33 3.7E-38 315.7 23.0 202 189-433 17-219 (232)
413 PRK14251 phosphate ABC transpo 100.0 2.4E-33 5.1E-38 318.5 24.4 215 854-1092 4-230 (251)
414 TIGR01846 type_I_sec_HlyB type 100.0 1.5E-33 3.3E-38 364.2 25.9 208 184-433 470-680 (694)
415 PRK10418 nikD nickel transport 100.0 3.5E-33 7.6E-38 317.3 25.7 206 185-432 17-229 (254)
416 PRK14267 phosphate ABC transpo 100.0 1.9E-33 4E-38 319.7 23.5 209 184-432 17-236 (253)
417 PRK14263 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 320.6 23.0 206 879-1092 20-240 (261)
418 TIGR01842 type_I_sec_PrtD type 100.0 2.9E-33 6.4E-38 352.0 27.5 209 184-433 331-542 (544)
419 PRK14274 phosphate ABC transpo 100.0 3.9E-33 8.4E-38 318.0 26.0 207 184-432 25-242 (259)
420 TIGR01978 sufC FeS assembly AT 100.0 2.6E-33 5.7E-38 316.7 24.2 213 184-432 13-233 (243)
421 PRK15093 antimicrobial peptide 100.0 4.1E-33 8.9E-38 327.3 26.7 214 184-432 20-247 (330)
422 PRK14254 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 322.8 24.5 214 854-1092 39-264 (285)
423 TIGR03873 F420-0_ABC_ATP propo 100.0 1.8E-33 3.9E-38 320.2 23.0 209 184-432 14-225 (256)
424 PRK13645 cbiO cobalt transport 100.0 1.3E-33 2.8E-38 326.8 21.9 206 184-432 24-239 (289)
425 PRK10419 nikE nickel transport 100.0 2.5E-33 5.4E-38 320.6 24.1 224 855-1093 4-237 (268)
426 TIGR01166 cbiO cobalt transpor 100.0 1E-33 2.2E-38 307.7 19.7 178 880-1067 5-188 (190)
427 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-33 4.1E-38 350.4 24.8 208 880-1094 14-227 (500)
428 PRK10744 pstB phosphate transp 100.0 4.7E-33 1E-37 317.4 25.5 206 185-432 27-243 (260)
429 PRK15056 manganese/iron transp 100.0 1.9E-33 4.2E-38 322.4 22.5 218 854-1093 6-226 (272)
430 cd03231 ABC_CcmA_heme_exporter 100.0 9.3E-34 2E-38 310.5 19.0 184 880-1080 13-198 (201)
431 PRK14255 phosphate ABC transpo 100.0 4.7E-33 1E-37 316.2 25.1 215 854-1092 5-231 (252)
432 cd03262 ABC_HisP_GlnQ_permease 100.0 1E-33 2.2E-38 313.5 19.2 195 184-422 13-213 (213)
433 PRK03695 vitamin B12-transport 100.0 2.7E-33 5.9E-38 316.8 23.1 197 882-1092 11-217 (248)
434 PRK14265 phosphate ABC transpo 100.0 4E-33 8.6E-38 319.8 24.6 215 853-1092 19-253 (274)
435 TIGR02203 MsbA_lipidA lipid A 100.0 2.6E-33 5.5E-38 355.7 25.4 209 184-433 345-556 (571)
436 COG0444 DppD ABC-type dipeptid 100.0 4.8E-33 1E-37 309.8 24.3 215 183-432 17-242 (316)
437 PRK15439 autoinducer 2 ABC tra 100.0 1.9E-33 4E-38 350.3 23.7 212 854-1094 11-226 (510)
438 PRK14235 phosphate transporter 100.0 3.8E-33 8.2E-38 319.1 24.2 208 184-432 32-250 (267)
439 TIGR01277 thiQ thiamine ABC tr 100.0 3.1E-33 6.7E-38 309.4 22.7 199 186-427 13-212 (213)
440 PRK10789 putative multidrug tr 100.0 3.3E-33 7.3E-38 352.8 26.0 208 184-433 328-538 (569)
441 PRK14238 phosphate transporter 100.0 3.8E-33 8.3E-38 319.6 24.0 215 854-1092 24-250 (271)
442 PRK10247 putative ABC transpor 100.0 2.2E-33 4.9E-38 313.0 21.5 209 854-1090 7-220 (225)
443 PRK10982 galactose/methyl gala 100.0 1.8E-33 3.9E-38 349.6 23.0 207 879-1094 10-220 (491)
444 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.3E-33 2.8E-38 321.9 19.9 211 854-1093 2-221 (275)
445 PRK11288 araG L-arabinose tran 100.0 2.5E-33 5.5E-38 348.9 24.2 216 854-1091 4-223 (501)
446 cd03252 ABCC_Hemolysin The ABC 100.0 9.6E-34 2.1E-38 318.9 18.3 196 880-1092 15-220 (237)
447 PRK14269 phosphate ABC transpo 100.0 5.5E-33 1.2E-37 314.3 24.4 208 184-432 15-229 (246)
448 CHL00131 ycf16 sulfate ABC tra 100.0 6E-33 1.3E-37 315.4 24.8 220 854-1092 7-236 (252)
449 COG1132 MdlB ABC-type multidru 100.0 6.4E-34 1.4E-38 359.9 18.5 211 853-1092 327-547 (567)
450 TIGR01846 type_I_sec_HlyB type 100.0 5.9E-32 1.3E-36 349.5 37.0 212 853-1092 454-675 (694)
451 COG4148 ModC ABC-type molybdat 100.0 5E-34 1.1E-38 305.2 14.6 197 188-433 15-218 (352)
452 PRK14243 phosphate transporter 100.0 4.8E-33 1E-37 317.7 23.7 218 854-1092 10-243 (264)
453 PRK14270 phosphate ABC transpo 100.0 6.2E-33 1.3E-37 314.9 24.3 207 184-432 17-234 (251)
454 PRK14241 phosphate transporter 100.0 5.5E-33 1.2E-37 316.6 23.9 208 184-432 17-241 (258)
455 TIGR01192 chvA glucan exporter 100.0 5.5E-33 1.2E-37 351.4 26.5 207 185-433 349-558 (585)
456 PRK14256 phosphate ABC transpo 100.0 7.5E-33 1.6E-37 314.5 24.9 208 184-432 17-235 (252)
457 PRK14259 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 318.2 23.5 206 184-433 26-253 (269)
458 PRK14237 phosphate transporter 100.0 1.2E-32 2.7E-37 314.9 26.6 207 184-432 33-250 (267)
459 PRK11701 phnK phosphonate C-P 100.0 6.5E-33 1.4E-37 316.0 24.1 207 184-432 19-240 (258)
460 TIGR02323 CP_lyasePhnK phospho 100.0 6E-33 1.3E-37 315.5 23.5 214 855-1092 4-233 (253)
461 PRK14246 phosphate ABC transpo 100.0 7.1E-33 1.5E-37 314.8 24.0 215 855-1092 11-236 (257)
462 PRK14245 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 314.7 23.4 206 184-432 16-233 (250)
463 PRK10790 putative multidrug tr 100.0 1.2E-33 2.6E-38 359.6 19.4 210 853-1092 339-558 (592)
464 COG4598 HisP ABC-type histidin 100.0 9E-34 2E-38 284.1 14.3 208 875-1093 14-237 (256)
465 PRK14266 phosphate ABC transpo 100.0 7.9E-33 1.7E-37 314.0 23.9 218 855-1092 4-229 (250)
466 cd03297 ABC_ModC_molybdenum_tr 100.0 5.2E-33 1.1E-37 307.9 21.9 192 189-426 16-214 (214)
467 PRK14248 phosphate ABC transpo 100.0 2E-32 4.4E-37 313.6 27.3 207 184-432 34-251 (268)
468 PRK13546 teichoic acids export 100.0 1.1E-32 2.4E-37 313.3 24.8 195 878-1094 35-229 (264)
469 PRK14239 phosphate transporter 100.0 1.1E-32 2.4E-37 313.3 24.8 207 184-432 18-235 (252)
470 TIGR02204 MsbA_rel ABC transpo 100.0 6.2E-33 1.3E-37 352.5 25.3 208 184-433 353-563 (576)
471 cd03213 ABCG_EPDR ABCG transpo 100.0 8.1E-33 1.8E-37 301.1 22.5 171 184-426 22-194 (194)
472 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-33 3.5E-38 316.5 17.4 195 881-1092 16-220 (234)
473 cd03245 ABCC_bacteriocin_expor 100.0 2.7E-33 5.9E-38 311.6 19.0 195 880-1090 17-220 (220)
474 PRK13547 hmuV hemin importer A 100.0 6.1E-33 1.3E-37 317.0 22.3 213 184-432 14-243 (272)
475 TIGR02982 heterocyst_DevA ABC 100.0 1.5E-32 3.2E-37 305.6 24.6 196 184-422 18-219 (220)
476 PRK13539 cytochrome c biogenes 100.0 2.6E-33 5.7E-38 308.4 18.4 185 880-1081 15-199 (207)
477 PRK11176 lipid transporter ATP 100.0 1.6E-33 3.5E-38 358.1 19.1 213 853-1092 340-562 (582)
478 PRK14244 phosphate ABC transpo 100.0 9.2E-33 2E-37 313.5 23.2 212 184-432 18-236 (251)
479 PRK09580 sufC cysteine desulfu 100.0 1.1E-32 2.4E-37 312.5 23.8 207 880-1092 14-230 (248)
480 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.9E-33 4.2E-38 316.6 17.4 196 880-1092 16-221 (238)
481 PRK11160 cysteine/glutathione 100.0 1.9E-33 4.1E-38 355.1 19.1 212 853-1092 337-557 (574)
482 cd03230 ABC_DR_subfamily_A Thi 100.0 4E-33 8.7E-38 298.1 18.6 156 880-1082 13-170 (173)
483 cd03254 ABCC_Glucan_exporter_l 100.0 2.2E-33 4.7E-38 314.4 17.3 211 854-1092 2-221 (229)
484 PRK10419 nikE nickel transport 100.0 6.8E-33 1.5E-37 317.0 21.7 207 184-432 25-240 (268)
485 PRK14240 phosphate transporter 100.0 1.5E-32 3.3E-37 311.6 24.3 206 185-432 17-233 (250)
486 PRK03695 vitamin B12-transport 100.0 1.1E-32 2.3E-37 312.0 22.9 201 186-432 11-221 (248)
487 PRK13545 tagH teichoic acids e 100.0 1E-32 2.3E-37 329.7 23.9 193 880-1094 37-229 (549)
488 PRK14262 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 311.6 24.2 207 184-432 16-233 (250)
489 COG4987 CydC ABC-type transpor 100.0 1.2E-33 2.6E-38 328.0 15.4 212 854-1093 336-557 (573)
490 PRK14252 phosphate ABC transpo 100.0 1.8E-32 3.9E-37 313.4 24.9 216 853-1092 15-244 (265)
491 cd03252 ABCC_Hemolysin The ABC 100.0 8.3E-33 1.8E-37 311.3 21.8 206 184-433 15-225 (237)
492 PRK14272 phosphate ABC transpo 100.0 1.8E-32 3.9E-37 311.4 24.6 208 184-432 17-235 (252)
493 COG4604 CeuD ABC-type enteroch 100.0 7.1E-34 1.5E-38 289.8 11.6 209 876-1094 10-222 (252)
494 PRK14275 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 320.7 20.3 207 184-432 52-269 (286)
495 COG1129 MglA ABC-type sugar tr 100.0 7.7E-33 1.7E-37 327.5 21.7 218 876-1102 17-241 (500)
496 PRK14264 phosphate ABC transpo 100.0 1.2E-32 2.6E-37 320.4 23.0 221 854-1092 45-284 (305)
497 TIGR01189 ccmA heme ABC export 100.0 4.8E-33 1E-37 304.3 18.5 184 879-1079 12-197 (198)
498 cd03229 ABC_Class3 This class 100.0 5.6E-33 1.2E-37 298.4 18.7 158 880-1082 13-176 (178)
499 TIGR02324 CP_lyasePhnL phospho 100.0 1.3E-32 2.9E-37 306.9 22.4 191 880-1081 21-223 (224)
500 PRK14255 phosphate ABC transpo 100.0 3.7E-32 8.1E-37 308.8 26.3 207 184-432 18-235 (252)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-247 Score=2271.30 Aligned_cols=1274 Identities=54% Similarity=0.931 Sum_probs=1197.9
Q ss_pred cCchHhhHHHHHhhCCChhhhhhcccccccccCcccceeeccCCcChhhhHHHHHHHHhhhhhcHHHHHHHHHHHhhhcC
Q 000615 51 QDDEEELRWAAIERLPTYDRLKKGMLNQVLEDGKVVKHEVDVSNLAVQDKKRLLESILKIVEEDNEKFLKRIRHRTDRVG 130 (1389)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (1389)
+||||+|||||+|||||++| +++.+.. + .++|+.++++.+++.+.++..+..++|+|+++.++++|++++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~-~-----~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~- 81 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIF-E-----SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV- 81 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhc-c-----CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc-
Confidence 45999999999999999999 5554321 1 259999999999999999999999999999999999999998
Q ss_pred CCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcCCCCcH
Q 000615 131 IEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGK 210 (1389)
Q Consensus 131 ~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 210 (1389)
++|.++++++++.+++++..| ||+.|...+.++..+...+.. ++...+||+|+||.++||+|++++|||||||
T Consensus 82 -~~p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ 154 (1391)
T KOG0065|consen 82 -ELPTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGK 154 (1391)
T ss_pred -cCCceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCch
Confidence 899999999999999998876 999999999999887766654 5566889999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHH
Q 000615 211 TTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREK 290 (1389)
Q Consensus 211 STLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 290 (1389)
||||++|+|.++......|+|+|||++.+++.++++++|++|+|.|+|+|||||||+|+++|++++.|++ +..|+|+
T Consensus 155 ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~ 231 (1391)
T KOG0065|consen 155 TTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREK 231 (1391)
T ss_pred HHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHH
Confidence 9999999999998877889999999999999999999999999999999999999999999999998887 6677776
Q ss_pred hcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCC
Q 000615 291 QAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEIS 370 (1389)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEpt 370 (1389)
+. ..+|++++++||++|+||+|||++.||+||||||||+||++++++++++||||+|
T Consensus 232 ~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t 288 (1391)
T KOG0065|consen 232 LA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEIT 288 (1391)
T ss_pred HH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccc
Confidence 42 1579999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHH
Q 000615 371 TGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVAD 450 (1389)
Q Consensus 371 sgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad 450 (1389)
+|||++|+.++++.||+++|..+.|++++++||+++++++||+|++|++|+++|+||++++++||+++||+||+++++||
T Consensus 289 ~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~AD 368 (1391)
T KOG0065|consen 289 RGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTAD 368 (1391)
T ss_pred ccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHH
Q 000615 451 FLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAR 530 (1389)
Q Consensus 451 fl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 530 (1389)
|+++++++++++++|..+..|+.+.+++||.+.|..++.++++..+++.++++++.++.++..++|..+.|+|++.|+.|
T Consensus 369 fLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R 448 (1391)
T KOG0065|consen 369 FLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIR 448 (1391)
T ss_pred HHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 000615 531 EWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRD 610 (1389)
Q Consensus 531 ~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~ 610 (1389)
+|++++||.+++++++++.+++++++|++|+++++ .+..++..+.|++||++++.+|++++|+.++++++|||+|||+
T Consensus 449 ~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~ 526 (1391)
T KOG0065|consen 449 EFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRD 526 (1391)
T ss_pred HHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhc
Confidence 99999999999999999999999999999999985 5667788999999999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 000615 611 HLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLG 690 (1389)
Q Consensus 611 ~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~ 690 (1389)
..||++|++++|.+++++|++++++++|.+|+||++|+.+++++||.+|+.++++++++.++||+++++++++.+|+++|
T Consensus 527 ~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g 606 (1391)
T KOG0065|consen 527 LSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIG 606 (1391)
T ss_pred ccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCC------------ccccccccc
Q 000615 691 TFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSI------------NQPTIGKVL 758 (1389)
Q Consensus 691 ~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~------------~~~~~G~~~ 758 (1389)
++.++++.+++||+|+..+||+||+|++|++|++|+++++++|||++++|+|.+.+|.+ ...+.|..+
T Consensus 607 ~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~ 686 (1391)
T KOG0065|consen 607 GILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDY 686 (1391)
T ss_pred HHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceE
Confidence 99999999999999999999999999999999999999999999999999998433321 235778999
Q ss_pred ccccCcc-----ccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccCcccchhhhhhccccc
Q 000615 759 LKIRGFS-----TESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSK 833 (1389)
Q Consensus 759 l~~~~~~-----~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1389)
++.+++. ...+|+|+++|+++||.++|++++++++.|+++....+..+..+..+........ . ...+..
T Consensus 687 v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~-~---~~~~~~-- 760 (1391)
T KOG0065|consen 687 VSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA-G---SSSEIE-- 760 (1391)
T ss_pred EecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc-c---cccccc--
Confidence 9999887 7889999999999999999999999999999999988888776655443221100 0 000000
Q ss_pred ccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhh
Q 000615 834 TVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVL 913 (1389)
Q Consensus 834 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L 913 (1389)
........++++++.|+++..++++||.|.+++|-+++.+| +++++|+|||+.++||.++||||+||||||||||+|
T Consensus 761 ~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvL 837 (1391)
T KOG0065|consen 761 KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVL 837 (1391)
T ss_pred ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHH
Confidence 00011111356788899999999999999999998888776 678999999999999999999999999999999999
Q ss_pred cCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc
Q 000615 914 AGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS 993 (1389)
Q Consensus 914 ~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~ 993 (1389)
|||++.|.++|+|.+||+|++++.|+|.+|||+|+|+|.|.+||+|.|.|+|+||++.+++.+++.++|++|++.++|++
T Consensus 838 A~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~ 917 (1391)
T KOG0065|consen 838 AGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKE 917 (1391)
T ss_pred hcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHH
Q 000615 994 LNDSMVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1072 (1389)
Q Consensus 994 ~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~ 1072 (1389)
++|.+||.+| +|||.+|||||+||++|++|| .||||||||||||++++..|++.+|+++++|+|||||+||||.++++
T Consensus 918 ~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife 996 (1391)
T KOG0065|consen 918 YADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFE 996 (1391)
T ss_pred hhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHH
Confidence 9999999999 999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hhCeEEEEecCcEEEEecCCCcchhHHHHHHHhCCCCcccccccCcccchheeccccchhcccccHHHHHhhchHHHHHH
Q 000615 1073 AFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNK 1152 (1389)
Q Consensus 1073 ~~d~~l~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 1152 (1389)
.||++++|++||+++|.||+|++++++++||++++|++++++ .||||||||+++.+.+...+.||+++|++|+++++++
T Consensus 997 ~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~~~~-~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 997 AFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKCISD-ENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred HHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccCCCC-CChHHHHHhhcccccccccCccHHHHHhccHHHHHHH
Confidence 999999999999999999999999999999999998865444 4999999999999988888999999999999999999
Q ss_pred HHHHhhCCCCCC-CCCCCCCCcCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhH
Q 000615 1153 ELIKELSTPPPG-SSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDL 1231 (1389)
Q Consensus 1153 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~ 1231 (1389)
+++++++.|+++ ..+..++++|++|+|.|++.|+|||+++|||+|+|+++|++++++.||++|++||+.|+ ++||+
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 999999999999 88899999999999999999999999999999999999999999999999999999995 78999
Q ss_pred HHHHhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccch
Q 000615 1232 QNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWEL 1311 (1389)
Q Consensus 1232 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~ 1311 (1389)
+|.+|++|+++++.+.+++..++|.+..||.++||||++|||||.+|++||+++|+||+++++.+|++|+|+|+||++++
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a 1232 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTA 1232 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhH
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCccccccccccccceEEeeecccCC
Q 000615 1312 GKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVCAANKILVPYLIFHFYPCQFE 1389 (1389)
Q Consensus 1312 ~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~~~w~~~~sp~~ 1389 (1389)
.+|+||+++++++.+|++++|||+++++||.++|+++.+++++++++||||++|++.|| +||+||||+||+|
T Consensus 1233 ~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP------~fW~wmy~lsP~t 1304 (1391)
T KOG0065|consen 1233 SKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIP------KFWIWMYYLSPVT 1304 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhccccccccccc------ceeeeeeecCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999999975
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.2e-225 Score=2235.10 Aligned_cols=1360 Identities=61% Similarity=1.049 Sum_probs=1217.8
Q ss_pred cccccccccccccCcccccccccccccccccccccCCCcccCCC--------CccCchHhhHHHHHhhCCChhhhhhccc
Q 000615 5 VADDLARSFSVRGGQSISSGSRRSWASASIREVWNAPDNVFSRS--------ERQDDEEELRWAAIERLPTYDRLKKGML 76 (1389)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (1389)
.|++|+||+| +++++ ++|.. +|+|++. ..|||||+|+|||+||||||+|+|++++
T Consensus 4 ~~~~~~~~~~----------~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (1470)
T PLN03140 4 RGGSMRRSIS----------RSVSR------SSRNM-EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIM 66 (1470)
T ss_pred CcccHHHHHH----------HHhhh------hhhhh-hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhh
Confidence 5667999998 33322 33432 4666331 1278999999999999999999999999
Q ss_pred cccc-ccCccc---ceeeccCCcChhhhHHHHHHHHhhhhhcHHHHHHHHHHHhhhcCCCCCccEEEEeeeEEEEEEecC
Q 000615 77 NQVL-EDGKVV---KHEVDVSNLAVQDKKRLLESILKIVEEDNEKFLKRIRHRTDRVGIEIPKIEVRYDHLSVEGDVHVG 152 (1389)
Q Consensus 77 ~~~~-~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~v~~~~l~v~~~~~~~ 152 (1389)
.+.. ++|... .+++|+++||.++++.++++++++.++|+++|++++++|.|++|+++|++||+|+||+|+++++++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~ 146 (1470)
T PLN03140 67 KSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIG 146 (1470)
T ss_pred hcccccccccccccccccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCC
Confidence 6421 122111 235999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEE
Q 000615 153 TRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKIT 232 (1389)
Q Consensus 153 ~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~ 232 (1389)
++.+||++|.+.+.++.+....+...+++.+++||+||||.++|||+++|+||||||||||||+|+|+++++.+++|+|+
T Consensus 147 ~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~ 226 (1470)
T PLN03140 147 SRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEIT 226 (1470)
T ss_pred cccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEE
Confidence 99999999999999887766544433445578899999999999999999999999999999999999988777899999
Q ss_pred ECCeeCCCCCcCceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhcc
Q 000615 233 YCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQ 312 (1389)
Q Consensus 233 ~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~ 312 (1389)
|||+++++..+++.++||+|+|.|++++||+|||.|+++|++.+.++++..++.++|++.++.|+++++.++++....+.
T Consensus 227 ~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~ 306 (1470)
T PLN03140 227 YNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGV 306 (1470)
T ss_pred ECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcc
Confidence 99999987777788999999999999999999999999999877766666677788888888888888899999888887
Q ss_pred chhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhC
Q 000615 313 ETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHIL 392 (1389)
Q Consensus 313 ~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~ 392 (1389)
+.+..++++++.+||++|+||.||+++.|||||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..
T Consensus 307 ~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~ 386 (1470)
T PLN03140 307 KSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLT 386 (1470)
T ss_pred hhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhc
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCC
Q 000615 393 DVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPY 472 (1389)
Q Consensus 393 ~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~ 472 (1389)
++|+|+++|||+++++++||+|++|++|+++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+
T Consensus 387 g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~ 466 (1470)
T PLN03140 387 EATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPY 466 (1470)
T ss_pred CCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999988888887766788
Q ss_pred CCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 000615 473 RYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFM 552 (1389)
Q Consensus 473 ~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ 552 (1389)
++.++++|+++|++++.++++.++++.|.++++.++.....++|..++|+|++.|++|++++++||+..+++++++.+++
T Consensus 467 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ 546 (1470)
T PLN03140 467 RYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIV 546 (1470)
T ss_pred ccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88899999999999999988888877777666666666666789999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHH
Q 000615 553 SLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISI 632 (1389)
Q Consensus 553 ali~~tvf~~~~~~~~~~~~~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~ 632 (1389)
|+++|++||+++++..+..++..+.|++||++++.++++++++..++.++|||+|||+.+||++|+|+++.++.++|+.+
T Consensus 547 ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~ 626 (1470)
T PLN03140 547 AAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISI 626 (1470)
T ss_pred HHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHH
Confidence 99999999999876655566788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchh
Q 000615 633 LDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEP 712 (1389)
Q Consensus 633 ~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~ 712 (1389)
+++++|++|+|||+|+++++++||.++++++++++++.++|++++++++++.+|+++++++++++++|+||++++++||+
T Consensus 627 i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~ 706 (1470)
T PLN03140 627 IESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPN 706 (1470)
T ss_pred HHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 000615 713 FLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAA 792 (1389)
Q Consensus 713 ~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~ 792 (1389)
||+|++|+||+.|+++++++|||.+.+|.+....+ ...+.|..+|+.+++..++.|+|++++++++++++|+++++++
T Consensus 707 w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~--~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~ 784 (1470)
T PLN03140 707 WWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASD--NSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLA 784 (1470)
T ss_pred HHHHHHHhCHHHHHHHHHHHHhccCccccCcccCC--CCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998886432221 2357899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCceeeeccchhhhcc--Cc----c-cchhh---hhh--cccc-------ccc-c-cccccccCccccccC
Q 000615 793 LAYLNPIGDSNSTVIEEDGEKQRAS--GH----E-AEGMQ---MAV--RSSS-------KTV-G-AAQNVTNRGMILPFQ 851 (1389)
Q Consensus 793 l~~~~~~~~~~~~~~~~~~~~~~~~--~~----~-~~~~~---~~~--~~~~-------~~~-~-~~~~~~~~g~~~~~~ 851 (1389)
+++.++..........+..+..... .. . .+... ... +... ... . .......+++.+|..
T Consensus 785 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (1470)
T PLN03140 785 LTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFT 864 (1470)
T ss_pred HHhcCccCCCCccccccchhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCC
Confidence 9999876554443321111100000 00 0 00000 000 0000 000 0 001123346677888
Q ss_pred CceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCc
Q 000615 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1389)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1389)
|.+++|+|++|.++.+.+.++.+..++++++|+|||++++||+++||||||||||||||++|+|+.++|.++|+|.+||.
T Consensus 865 ~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~ 944 (1470)
T PLN03140 865 PLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGF 944 (1470)
T ss_pred cceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCc
Confidence 99999999999999887776666666777899999999999999999999999999999999999877778999999999
Q ss_pred cCChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 932 PKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 932 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
+.....+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.+.+++.++++++++.++|.+++|+.+|.+++++|||||
T Consensus 945 ~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGe 1024 (1470)
T PLN03140 945 PKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQ 1024 (1470)
T ss_pred cCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHH
Confidence 87655677889999999999999999999999998887666666667788999999999999999999988888999999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
||||+||++|+.+|+||||||||||||+.++..+++.|++++++|+|||||+|||+.++++.||++++|.+||+++|.||
T Consensus 1025 rkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~ 1104 (1470)
T PLN03140 1025 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGP 1104 (1470)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECC
Confidence 99999999999999999999999999999999999999999988999999999999778999999999988899999999
Q ss_pred CCcchhHHHHHHHhCCCCcccccccCcccchheeccccchhcccccHHHHHhhchHHHHHHHHHHhhCCCCCCCCCCCCC
Q 000615 1092 LGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFP 1171 (1389)
Q Consensus 1092 ~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 1171 (1389)
.+++++++++||++++|+++||+.+|||||++|+++...+...+.||++.|++|++++++++.+++++.++++.++..++
T Consensus 1105 ~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1470)
T PLN03140 1105 LGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFA 1184 (1470)
T ss_pred cccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccC
Confidence 99888999999999988888999999999999998876655566799999999999999988888888877777676777
Q ss_pred CcCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHhHHHHHHHHHHHhhhh
Q 000615 1172 TKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAI 1251 (1389)
Q Consensus 1172 ~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 1251 (1389)
++|++++++|++.|+||+++++||||.|+++|+++++++|+++|++||+++++..+++++++++|++|++++|+++.+++
T Consensus 1185 ~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 1264 (1470)
T PLN03140 1185 TQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCS 1264 (1470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999988778899999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHHHHHHHHHHH
Q 000615 1252 SVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLY 1331 (1389)
Q Consensus 1252 ~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 1331 (1389)
+++|++..||+||+|||++|+|++++|++|++++|+||.++++++|++|+|||+||++++++||||+++++++.++++++
T Consensus 1265 ~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~ 1344 (1470)
T PLN03140 1265 TVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYY 1344 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCccccccccccccceEEeeecccCC
Q 000615 1332 GMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVCAANKILVPYLIFHFYPCQFE 1389 (1389)
Q Consensus 1332 g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~~~w~~~~sp~~ 1389 (1389)
|+++++++||.++|++++++++++|++||||++|+++|| +||+|+||+||++
T Consensus 1345 g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP------~~~~W~~~isp~~ 1396 (1470)
T PLN03140 1345 GMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIP------KWWVWYYWICPVA 1396 (1470)
T ss_pred HHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCc------hHHHHHHHcCHHH
Confidence 999999999999999999999999999999999999999 9999999999974
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.6e-178 Score=1786.54 Aligned_cols=1221 Identities=32% Similarity=0.548 Sum_probs=1012.3
Q ss_pred hcHHHHHHHHHHHhhhcCCCCC--ccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeee
Q 000615 113 EDNEKFLKRIRHRTDRVGIEIP--KIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDV 190 (1389)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~p--~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 190 (1389)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||+.|.+.+.......... ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4667777665555556555555 9999999999999 445666789999998886654332221 12344567899999
Q ss_pred EEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCCHHHHHH
Q 000615 191 SGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMTVRETLD 267 (1389)
Q Consensus 191 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1389)
|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997432 125999999999875432 2456999999999999999999999
Q ss_pred HhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhH
Q 000615 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1389)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1389)
|+++++.+..+.+ ...+.++ .+...+.+++.+||++++||.||++..|||||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9987764321100 0001110 0123466899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecC
Q 000615 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1389)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~ 427 (1389)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..++|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999986689999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcc---
Q 000615 428 RDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKS--- 504 (1389)
Q Consensus 428 ~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~--- 504 (1389)
++++.+||+++||+||++.|+|||++++++++++. ++.. .+...+.+.++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~~-~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAERQ-IKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhhh-cccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 99999999999999999999999999999876432 2111 111233568899999999988777666554322110
Q ss_pred ------------cCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCC
Q 000615 505 ------------QAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNG 572 (1389)
Q Consensus 505 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~ 572 (1389)
...+.....++|..++|.|++.|++|+++.++||+..++.++++.+++|+++|++||+.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000112233567889999999999999999999999999999999999999999999987543 45
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchH
Q 000615 573 GSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1389)
Q Consensus 573 ~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1389)
.+.+.|++||++++.++.++.++...+.+|+||+|||..++|++++|+++..+.++|+.++.+++|++|+|||+|+++++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 67789999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHH
Q 000615 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1389)
Q Consensus 653 ~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 732 (1389)
++||.++++.++...++.++++++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccCC--C-CC---------CCc---------ccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHH
Q 000615 733 NEFLGGRWDAQN--K-DP---------SIN---------QPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIA 791 (1389)
Q Consensus 733 nef~~~~~~~~~--~-~~---------~~~---------~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~ 791 (1389)
|||.+..++|.. + ++ ..| +.+.|+.+|+. ++.....|+|+++++++++.++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999998842 1 11 011 13467777774 44445678999999999999999999999
Q ss_pred HHHhcCCCCCCCceeeeccchhhhc--cCcccchhhhhhccccc-----ccccccccccC-ccccccCCceEEEecccee
Q 000615 792 ALAYLNPIGDSNSTVIEEDGEKQRA--SGHEAEGMQMAVRSSSK-----TVGAAQNVTNR-GMILPFQPLSLTFDNMSYF 863 (1389)
Q Consensus 792 ~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 863 (1389)
++++.++.................. .....+........... ......+.... ..........++|+|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 9999986544433322221111000 00000000000000000 00000000000 0000011235789999887
Q ss_pred eeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-eEEEEEEEcCccCChhhhhhee
Q 000615 864 VDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVS 942 (1389)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~~~~~~~~~~~ 942 (1389)
++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.++| +.+|+|.+||++... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 6421 22467999999999999999999999999999999999987644 346999999998753 467889
Q ss_pred eEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000615 943 GYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV 1022 (1389)
Q Consensus 943 gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~ 1022 (1389)
|||+|+|.+++.+||+|+|.|++.++.+.+.+.++++++++++++.++|.+++|+.+|.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999888766666667778899999999999999999986543 89999999999999999
Q ss_pred hCCC-CceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCcchhHHHH
Q 000615 1023 ANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIE 1101 (1389)
Q Consensus 1023 ~~p~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~~~~~~~~ 1101 (1389)
.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|.|+.+++++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999997678899999999987799999999988889999
Q ss_pred HHHhCCCCcccccccCcccchheeccccchhcccccHHHHHhhchHHHHHHHHHHhhCCCCCCCC---CCCCCCcCCCch
Q 000615 1102 YFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSS---DLYFPTKYSQPF 1178 (1389)
Q Consensus 1102 ~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1178 (1389)
||+++ |.++||+++|||||++|+++...+.....++.+.|+.|+++++..+.++++..+..... +....++|+.|+
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1076 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASL 1076 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCH
Confidence 99987 66679999999999999987655444456899999999988877666655543322111 112234789999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHhHHHHHHHHHHHhhhhhhhhhHH
Q 000615 1179 LTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVIC 1258 (1389)
Q Consensus 1179 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 1258 (1389)
++|++.|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .+++|.|.
T Consensus 1077 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~~~~~~f~ 1152 (1394)
T TIGR00956 1077 WYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-QQYLPPFV 1152 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-HHhhhhHH
Confidence 999999999999999999999999999999999999999999987 57899999999999888887763 45678888
Q ss_pred HHHHHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhH-------HHHHHHHHHHHHHHHHH
Q 000615 1259 VERTVY-YRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGK-------FCLFFYFMWASFIIFTL 1330 (1389)
Q Consensus 1259 ~er~v~-~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~~~~~~~~ 1330 (1389)
.||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.. |++|+++++++.+++++
T Consensus 1153 ~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s 1232 (1394)
T TIGR00956 1153 AQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFST 1232 (1394)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHH
Confidence 888885 9999999999999999999999999999999999999999999988876 99999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCccccccccccccceEEeeecccCC
Q 000615 1331 YGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVCAANKILVPYLIFHFYPCQFE 1389 (1389)
Q Consensus 1331 ~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~~~w~~~~sp~~ 1389 (1389)
+|+++++++||.++|+.+++++++++++||||++|+++|| .||+|+||+||++
T Consensus 1233 ~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip------~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1233 LGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMP------GFWIFMYRCSPFT 1285 (1394)
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCc------HHHhHHHhcCHHH
Confidence 9999999999999999999999999999999999999999 9999999999974
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.7e-85 Score=822.56 Aligned_cols=515 Identities=26% Similarity=0.468 Sum_probs=436.4
Q ss_pred CCceEEEeccceeeeccc----------------cccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhc
Q 000615 851 QPLSLTFDNMSYFVDMPA----------------EMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLA 914 (1389)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 914 (1389)
.+..++|.|++|.++... ..++..+.++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999886542 1112223445678999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc
Q 000615 915 GRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL 994 (1389)
Q Consensus 915 g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 994 (1389)
|+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+.+...+++.++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9866544689999999986543 345689999999999999999999998877765555556667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhh
Q 000615 995 NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1074 (1389)
Q Consensus 995 ~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 1074 (1389)
+|+.+|+...++|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred CeEEEEecCcEEEEecCCCcchhHHHHHHHhCCCCcccccccCcccchheeccccchhc-----c----cccHHHHHhhc
Q 000615 1075 DELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQ-----L----GIDFAEVYADS 1145 (1389)
Q Consensus 1075 d~~l~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~-----~----~~~~~~~~~~s 1145 (1389)
|++++|+ +|+++|.|+. +++.+||+++ |. +||+++|||||++|+++...... . .....+.|++.
T Consensus 275 D~iilL~-~G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLS-EGRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEec-CCcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 9999998 5899999986 5789999999 54 58999999999999987532100 0 01122344321
Q ss_pred hHHHHHHHHHHhh--CC-CCC-----CCCCCC-CCCcCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 000615 1146 SLHQRNKELIKEL--ST-PPP-----GSSDLY-FPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGL 1216 (1389)
Q Consensus 1146 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1216 (1389)
. .++..+.++.. .. +.+ ..+... ..+.+..+|++|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 000000 11235678999999999999998 99999999999999999999999
Q ss_pred HhccCCCCCCCHhhHHHHHhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000615 1217 IYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVV 1296 (1389)
Q Consensus 1217 ~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~ 1296 (1389)
+||+++ ..+++++.|++|++++++++.+++.++|.|+.||+||+|||.+|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 467899999999999998888888889999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCccccccccccc
Q 000615 1297 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVCAANKILV 1376 (1389)
Q Consensus 1297 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~ 1376 (1389)
|++|+|||+|+++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++||||+++ +||
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip------ 572 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLP------ 572 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hch------
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799
Q ss_pred cceEEeeecccC
Q 000615 1377 PYLIFHFYPCQF 1388 (1389)
Q Consensus 1377 ~~~~w~~~~sp~ 1388 (1389)
+||+|++|+||+
T Consensus 573 ~~~~W~~ylS~~ 584 (659)
T PLN03211 573 SCMAWIKYISTT 584 (659)
T ss_pred HHHHHHHHhCHH
Confidence 999999999996
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-85 Score=817.71 Aligned_cols=508 Identities=34% Similarity=0.614 Sum_probs=447.2
Q ss_pred CCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-eEEEEEEEc
Q 000615 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKIS 929 (1389)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~ 929 (1389)
.+..++|+|+++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..+| ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999887654321 3578999999999999999999999999999999999998764 789999999
Q ss_pred CccCChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 930 GYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 930 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
|++...+.+++.+|||.|+|.++|++||+|+|.|+|.+|++.+.+.++++++|+++++.+||.+++|+++|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 99888888999999999999999999999999999999999988899999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 799999
Q ss_pred cCCCcchhHHHHHHHhCCCCcccccccCcccchheecccc--chhcc----cccHHHHHhhchHHHHHH-HHHHhhCCCC
Q 000615 1090 GPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNIS--VENQL----GIDFAEVYADSSLHQRNK-ELIKELSTPP 1162 (1389)
Q Consensus 1090 g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~--~~~~~----~~~~~~~~~~s~~~~~~~-~~~~~~~~~~ 1162 (1389)
|+. +++.+||+++ |.| ||+.+||+||.+|+.+.. .+... .....+.++......+.. +..+.+....
T Consensus 253 G~~----~~~~~ff~~~-G~~-~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GFP-CPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTSK 326 (613)
T ss_pred cCH----HHHHHHHHhC-CCC-CCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhccccc
Confidence 997 5789999999 654 999999999999988742 11000 000111111011111110 0011111111
Q ss_pred CCCCCCCCCCcCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHhHHHHHH
Q 000615 1163 PGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSIC 1242 (1389)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1242 (1389)
..+.....+||.|+..+++|.+++.+|+|.+...|+++.+++|+++|++||+.++ +..+++++.|++|+.+
T Consensus 327 ------~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 327 ------KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFIL 397 (613)
T ss_pred ------ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHH
Confidence 1111127899999999999999999999999999999999999999999999976 4556679999999999
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHH
Q 000615 1243 IFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMW 1322 (1389)
Q Consensus 1243 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1322 (1389)
.++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|+++++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99988888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCccccccccccccceEEeeecccC
Q 000615 1323 ASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVCAANKILVPYLIFHFYPCQF 1388 (1389)
Q Consensus 1323 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~~~w~~~~sp~ 1388 (1389)
+..+.+.++|++++++.||...|..+++++...+++|+||+++.++|| .||+|++|+|++
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip------~~~~w~~~~S~~ 537 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIP------KYFRWISYLSYF 537 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCccccc------HHHHHHHHHhHH
Confidence 999999999999999999999999999999999999999999999999 999999999875
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=6.4e-83 Score=807.47 Aligned_cols=494 Identities=33% Similarity=0.539 Sum_probs=439.7
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-eEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCH
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999986543 3589999999988766778889999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~-~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1389)
+|||.|++.++.+.+...+++++.++++++.++|.+++|+.+|.++ .++|||||||||+||+||+.+|++|||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999998887766677778889999999999999999999754 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCcchhHHHHHHHhCCCCccccccc
Q 000615 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAY 1116 (1389)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~ 1116 (1389)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++ |. +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCCC
Confidence 999999999999999998899999999999888999999999998 5899999996 5789999998 54 699999
Q ss_pred Ccccchheeccccchhcc-----cccHHHHHhhchHHHHHHHHHHhhCCCCCC---CCCCCCCCcCCCchHHHHHHHHHH
Q 000615 1117 NPATWMLEVSNISVENQL-----GIDFAEVYADSSLHQRNKELIKELSTPPPG---SSDLYFPTKYSQPFLTQFRACFWK 1188 (1389)
Q Consensus 1117 npa~~~l~~~~~~~~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~R 1188 (1389)
|||||++++++...+... ..++.+.|+.|+.+++..+.......+.++ ..+....++|..+++.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 999999999765432211 124556677776665544333322111111 111112346789999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHhHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHh
Q 000615 1189 QYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRER 1268 (1389)
Q Consensus 1189 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~er~v~~rE~ 1268 (1389)
+++.+||||.++.+|+++++++|+++|++||+++. ++++++++.|++|++++++++.++..+++.++.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 467899999999999999999887788899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000615 1269 AAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIV 1348 (1389)
Q Consensus 1269 ~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1348 (1389)
.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++..||+|+++++++.++++++|+++++++||..+|..+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCccccccccccccceEEeeecccC
Q 000615 1349 LSFFLSVWNLFSGFLVARSVCAANKILVPYLIFHFYPCQF 1388 (1389)
Q Consensus 1349 ~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~~~w~~~~sp~ 1388 (1389)
+++++.++++|+||+++.++|| +||+|++|+||+
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip------~~~~W~~~isp~ 540 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIP------VYFKWLSYLSWF 540 (617)
T ss_pred HHHHHHHHHHHhhcccChhhcc------HHHHHHHHcCHH
Confidence 9999999999999999999999 999999999996
No 7
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-80 Score=771.82 Aligned_cols=585 Identities=29% Similarity=0.497 Sum_probs=491.2
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHH
Q 000615 133 IPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTT 212 (1389)
Q Consensus 133 ~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 212 (1389)
...++++|+|+++++... .+..+++|+||||+++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 356789999999986431 114578999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhc
Q 000615 213 LMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQA 292 (1389)
Q Consensus 213 LL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 292 (1389)
||++|+|+.+++..++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+|.++.+.. +++.|+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~~~k-- 142 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSKEEK-- 142 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCHHHH--
Confidence 99999999987667899999999887777778899999999999999999999999999876542 222222
Q ss_pred CCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCC
Q 000615 293 GIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTG 372 (1389)
Q Consensus 293 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsg 372 (1389)
+.++|.+++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 143 ----------------------~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 143 ----------------------RERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ----------------------HHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 3468999999999999999999988899999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000615 373 LDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1389)
Q Consensus 373 LDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl 452 (1389)
||+.++.++++.|+++|+. |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcc--chhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHH
Q 000615 453 QEVTSKK--DQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAR 530 (1389)
Q Consensus 453 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 530 (1389)
.++.+.. .+...... ......+.++..+...+......... .+ ..........++|.|+..+++|
T Consensus 280 l~l~s~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEAV--------RIAKLINKFSQTDNLKKTLEALEKSL----ST-SKKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhHH--------HHHHHhhhccccchhhhhHHHHhhhc----cc-ccccccccCCcHHHHHHHHHHH
Confidence 9988743 11100000 00000111110000000000000000 00 0000111167899999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhhh
Q 000615 531 EWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFA-ENAMTVLRLPIFYKQR 609 (1389)
Q Consensus 531 ~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~ll~~~~~~~~-~~~~~~~~~~vf~k~r 609 (1389)
.+..++|++.....|.+|.+++++++|++||+.+.+.. +.....|.+|+.+....+..+. .+.....++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999864332 3346788888888888676665 5888899999999999
Q ss_pred cCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Q 000615 610 DHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTL 689 (1389)
Q Consensus 610 ~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~ 689 (1389)
..+.|+.++|+++..+.++|+.++.+++|..++|||+|++++..+|+.+.+..++...++.+++.+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCcccccccccccccCccccCc
Q 000615 690 GTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESN 769 (1389)
Q Consensus 690 ~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~ 769 (1389)
++++++.+++++||+++.+.+|+||.|+.|+|+..|++++++.|||.+....|....+ .++...|..++...++...+
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~- 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGN-LCCESTGEDVLKQLGFEDSS- 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcC-CcccccHHHHHHhcCCcccc-
Confidence 9999999999999999999999999999999999999999999999873333322111 24566777888888876544
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000615 770 WYWIGVGALTGYSFLFNFLFIAALAYLN 797 (1389)
Q Consensus 770 ~~w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1389)
.|.++.++.++.++|.+++++++++..
T Consensus 582 -~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 -FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 689999999999999999999998754
No 8
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.3e-79 Score=777.30 Aligned_cols=572 Identities=26% Similarity=0.464 Sum_probs=482.5
Q ss_pred cccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCC
Q 000615 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 260 (1389)
+.+++||+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.+++.+
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34577999999999999999999999999999999999998775456899999999886544567899999999999999
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc-
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM- 339 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~- 339 (1389)
||+|||.|+++++.+... .+.+ ....++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~-------~~~~------------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRV-------TKKE------------------------KRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCC-------CHHH------------------------HHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 999999999877643210 1111 12246789999999999999999864
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
.|||||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999986 4899999999999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 420 G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
|+++|+|+++++.+||+++|++||++.|++||+.++++....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765422110 0 011234556666665554444333221
Q ss_pred CCCccc---CCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchh
Q 000615 500 PYDKSQ---AHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRY 576 (1389)
Q Consensus 500 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~ 576 (1389)
...... .........++..+++.|+..+++|.++..+||+..+..+.++.+++++++|++|++.+.+. .+.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111100 00011122456788999999999999999999999999999999999999999999976543 345667
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHH
Q 000615 577 FGALFFSLLNIMFNGF-AENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRF 655 (1389)
Q Consensus 577 ~g~lff~ll~~~~~~~-~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 655 (1389)
.|++|+.++...|..+ ..+.....++++|+|||..++|++++|++++.+.++|+.++.+++|++++||++|+++++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 8899999888887765 445667789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHh
Q 000615 656 FKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEF 735 (1389)
Q Consensus 656 f~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 735 (1389)
|.++++.++...++.+++.++++++++..+|..+++++++++++++||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000615 736 LGGRW-DAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYL 796 (1389)
Q Consensus 736 ~~~~~-~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~ 796 (1389)
.+..+ .|...+....+...|..+++.+|+..+ ++|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776 443222111234468889998888664 458999999999999999999999864
No 9
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3e-78 Score=763.17 Aligned_cols=610 Identities=20% Similarity=0.335 Sum_probs=472.0
Q ss_pred CCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcCCCCcHH
Q 000615 132 EIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKT 211 (1389)
Q Consensus 132 ~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 211 (1389)
..+.++++|.|+++.+.......+... ....+...-...+...+ ..++++|+|||++++|||+++|+||||||||
T Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~-~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKS 108 (659)
T PLN03211 34 SCYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETRQ-IQERTILNGVTGMASPGEILAVLGPSGSGKS 108 (659)
T ss_pred CCCceEEEEEeEEEEEccCCCcccccc----ccccccccccccccccc-CCCCeeeeCCEEEEECCEEEEEECCCCCCHH
Confidence 345789999999998753210111110 11111000001111112 2346799999999999999999999999999
Q ss_pred HHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHh
Q 000615 212 TLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQ 291 (1389)
Q Consensus 212 TLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~ 291 (1389)
|||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+.. ..+.+
T Consensus 109 TLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~~-- 177 (659)
T PLN03211 109 TLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQE-- 177 (659)
T ss_pred HHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHHH--
Confidence 9999999998764 2589999999987542 23569999999999999999999999865532210 00001
Q ss_pred cCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCC
Q 000615 292 AGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEIST 371 (1389)
Q Consensus 292 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEpts 371 (1389)
....++.+++.+||++++||.+|+...++|||||||||+||++|+.+|+||+|||||+
T Consensus 178 ----------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPts 235 (659)
T PLN03211 178 ----------------------KILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTS 235 (659)
T ss_pred ----------------------HHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCC
Confidence 1123677899999999999999998899999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHH
Q 000615 372 GLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADF 451 (1389)
Q Consensus 372 gLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adf 451 (1389)
|||+.++.++++.|+++++ .++|+|+++|||+.+++++||+|++|++|+++|+|+++++.+||+++||+||++.|||||
T Consensus 236 gLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf 314 (659)
T PLN03211 236 GLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADF 314 (659)
T ss_pred CcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHH
Confidence 9999999999999999987 489999999999988999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC---CCCccc------CCCCccccCcccCCHHH
Q 000615 452 LQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV---PYDKSQ------AHPASLVKEKYGISKWE 522 (1389)
Q Consensus 452 l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~---~~~~~~------~~~~~~~~~~~~~s~~~ 522 (1389)
+.++++...+.........+ ...+.+.+.|++.. .+...+.... +....+ ..........+..++|.
T Consensus 315 ~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 390 (659)
T PLN03211 315 LLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFN 390 (659)
T ss_pred HHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHH
Confidence 99998764321100000000 01123334443211 1111111100 000000 00000011224467899
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHhh
Q 000615 523 LFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMF-NGFAENAMTVLR 601 (1389)
Q Consensus 523 ~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~ll~~~~-~~~~~~~~~~~~ 601 (1389)
|+..+++|.+.. +|+......|+++.+++|+++|++||+.+ ..+.+.+.|++||.+++.++ +.+..+..+..+
T Consensus 391 Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~e 464 (659)
T PLN03211 391 QFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQE 464 (659)
T ss_pred HHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888 78888778999999999999999999864 23457789999999877554 556778888899
Q ss_pred hhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000615 602 LPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGR 681 (1389)
Q Consensus 602 ~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~ 681 (1389)
+++|+|||..++|++++|++++++.++|+.++.+++|++++|||+|+++++++|+.+++++++...++.+++.+++++++
T Consensus 465 r~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~ 544 (659)
T PLN03211 465 RAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIM 544 (659)
T ss_pred hHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCcc-----ccCCCCCCCccccccc
Q 000615 682 TEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRW-----DAQNKDPSINQPTIGK 756 (1389)
Q Consensus 682 ~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~~~~G~ 756 (1389)
+..+|+++++++.+++++|+||+++ +||+||+|++|+||+.|+++++++|||.+.+. +|.... +....+.
T Consensus 545 ~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~---~~~~~~c 619 (659)
T PLN03211 545 DAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPH---GSDRASC 619 (659)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcc---cCCCCCC
Confidence 9999999999999999999999997 79999999999999999999999999976542 332211 0001111
Q ss_pred ccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000615 757 VLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLN 797 (1389)
Q Consensus 757 ~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1389)
.++....+. ....|.++++|+++.++|.++.++++++.+
T Consensus 620 ~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 620 KFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred ccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 122222222 234788999999999999999999998654
No 10
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.2e-79 Score=826.30 Aligned_cols=495 Identities=22% Similarity=0.381 Sum_probs=433.0
Q ss_pred ccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--ceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCC
Q 000615 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 953 (1389)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+... ..+++.++||+|+|.++|
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999997532 2468999999987642 234566999999999999
Q ss_pred CCCHHHHHHHHHHhhcCC----CCcHHHHHHH-HHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000615 954 YVTVYESLLYSAWLRLSS----DVDTKKRKMF-VDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~----~~~~~~~~~~-v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1389)
.+||+|+|.|++.++.+. +...+++.+. ++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+||
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998877543 2233443333 57799999999999999998888999999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCcchhHHHHHHHhCC
Q 000615 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVP 1107 (1389)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~~~~~~~~~f~~~~ 1107 (1389)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|.+ |+++|.|+. +++.+||+++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l- 305 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM- 305 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-
Confidence 999999999999999999999999874 999999999998789999999999985 899999986 5789999999
Q ss_pred CCcccccccCcccchheeccccchh----------cccccHHHHHhhchHHHHHHHHHHhhCCCC---------------
Q 000615 1108 GVPKIKEAYNPATWMLEVSNISVEN----------QLGIDFAEVYADSSLHQRNKELIKELSTPP--------------- 1162 (1389)
Q Consensus 1108 ~~~~~~~~~npa~~~l~~~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1162 (1389)
|. +||+++|||||+++++++.... ....++++.|++|+.+++..+.++......
T Consensus 306 G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 306 GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred CC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 55 6999999999999998754211 112478999999998876655543321110
Q ss_pred CCCCCCCCCCcCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHhHHHHHH
Q 000615 1163 PGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSIC 1242 (1389)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1242 (1389)
..++.....+.|..|+++|+++|++|+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0001122234688999999999999999999999999999999999999999999999986 4578899999999999
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHH
Q 000615 1243 IFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMW 1322 (1389)
Q Consensus 1243 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1322 (1389)
++.+++++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||+++++.||.|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999876554 55667999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCccccccccccccceEEeeecccCC
Q 000615 1323 ASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVCAANKILVPYLIFHFYPCQFE 1389 (1389)
Q Consensus 1323 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~~~w~~~~sp~~ 1389 (1389)
++.++++++++++++++||..+|+.++++++.++++|+||++|+++|| +||+|++|+||++
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp------~~~~W~~yisp~~ 601 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSML------GWSKWIYYVNPLA 601 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhcc------HHHHHHHHcCHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999973
No 11
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.1e-76 Score=797.06 Aligned_cols=599 Identities=22% Similarity=0.405 Sum_probs=497.1
Q ss_pred CCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcCCCCcH
Q 000615 131 IEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGK 210 (1389)
Q Consensus 131 ~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 210 (1389)
++...+.+.|+|++++++...+.+. ....+.++++|+|||+.++||++++|+|||||||
T Consensus 861 ~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGK 919 (1470)
T PLN03140 861 LPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGK 919 (1470)
T ss_pred cCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCCH
Confidence 4555678999999998764311000 0111234579999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHH
Q 000615 211 TTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREK 290 (1389)
Q Consensus 211 STLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 290 (1389)
||||++|+|+.++. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+.. ..+.+
T Consensus 920 TTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~-------~~~~~- 990 (1470)
T PLN03140 920 TTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKE-------VSKEE- 990 (1470)
T ss_pred HHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCC-------CCHHH-
Confidence 99999999997542 3589999999887644445679999999999999999999999876542210 00001
Q ss_pred hcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCC
Q 000615 291 QAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEIS 370 (1389)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEpt 370 (1389)
....++++++.+||++++|+.+|+...+||||||||||+||++|+.+|++|||||||
T Consensus 991 -----------------------~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPT 1047 (1470)
T PLN03140 991 -----------------------KMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPT 1047 (1470)
T ss_pred -----------------------HHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 112467899999999999999998877899999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC-CeEEEecCh----hHHHHHHHhc-CC-CCC
Q 000615 371 TGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE-GQIVYQGPR----DNVLEFFEHM-GF-KCP 443 (1389)
Q Consensus 371 sgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~-G~iv~~G~~----~~~~~~F~~l-G~-~~p 443 (1389)
+|||+.++..+++.|+++++. |+|+|+++|||+.++++.||++++|++ |+++|+|+. +++.+||+++ |+ +||
T Consensus 1048 sgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p 1126 (1470)
T PLN03140 1048 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIK 1126 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCC
Confidence 999999999999999999864 789999999999889999999999996 899999996 6899999997 66 499
Q ss_pred CCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCcccCCHHHH
Q 000615 444 ERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWEL 523 (1389)
Q Consensus 444 ~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (1389)
+..|||||+.++++..... ....++++.|+.++.+++..+.++................+|..++|.|
T Consensus 1127 ~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 1194 (1470)
T PLN03140 1127 EKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQ 1194 (1470)
T ss_pred CCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHH
Confidence 9999999999997643211 1124678888888776665443321110000111111235678899999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHHHhhh
Q 000615 524 FRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFA-ENAMTVLRL 602 (1389)
Q Consensus 524 ~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~ll~~~~~~~~-~~~~~~~~~ 602 (1389)
++.|++|+++.+||++.....|+++.+++|+++|++||+.+.+..+.++.++..|++|+++++..++... .++....+|
T Consensus 1195 ~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR 1274 (1470)
T PLN03140 1195 FKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVER 1274 (1470)
T ss_pred HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998866555666677899999988887775554 345666799
Q ss_pred hhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000615 603 PIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRT 682 (1389)
Q Consensus 603 ~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~ 682 (1389)
++|+|||..++|++++|+++.++.++|+.++.+++|.+++|||+|+.++++.||.++++.++....+.+++.++++++++
T Consensus 1275 ~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~ 1354 (1470)
T PLN03140 1275 TVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPN 1354 (1470)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCccccccccccccc
Q 000615 683 EVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIR 762 (1389)
Q Consensus 683 ~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~ 762 (1389)
..+|..+++++..++++|+||++++++||+||+|+||+||+.|++++++.|||.+....|.+++.. +..+..+.+++.+
T Consensus 1355 ~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~ 1433 (1470)
T PLN03140 1355 QQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGA-PDPTIKWYIQDHY 1433 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCC-CCCcHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999998876655443210 1122233446777
Q ss_pred CccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000615 763 GFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNP 798 (1389)
Q Consensus 763 ~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~ 798 (1389)
||.. .|.|.++++++++.++|.+++++++++++.
T Consensus 1434 g~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1434 GYDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred CcCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 8864 468999999999999999999999999875
No 12
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-75 Score=732.43 Aligned_cols=771 Identities=23% Similarity=0.338 Sum_probs=419.6
Q ss_pred CCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCC
Q 000615 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL 255 (1389)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 255 (1389)
+.+++.+||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|+++.++.. +.++|.|+|+|.
T Consensus 361 PsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePv 437 (1228)
T KOG0055|consen 361 PSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV 437 (1228)
T ss_pred CCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechh
Confidence 3445678999999999999999999999999999999999999998 9999999999988764 478999999998
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
+|. .||+|||.|+. |+.+.++..++++.++.. +. +..|++.+||.|
T Consensus 438 lF~-~tI~eNI~~G~-------------------------~dat~~~i~~a~k~ana~-----~f---i~~lp~g~~T~v 483 (1228)
T KOG0055|consen 438 LFA-TTIRENIRYGK-------------------------PDATREEIEEAAKAANAH-----DF---ILKLPDGYDTLV 483 (1228)
T ss_pred hhc-ccHHHHHhcCC-------------------------CcccHHHHHHHHHHccHH-----HH---HHhhHHhhcccc
Confidence 885 69999999862 344445555665554432 33 445899999999
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
|+.. -.|||||||||+|||||+.+|+|||||||||+||+.++..+.+.|++..+ |+|+|+..|.. .+.+.+|+|+
T Consensus 484 ge~g-~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTivVaHRL--StIrnaD~I~ 558 (1228)
T KOG0055|consen 484 GERG-VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIVVAHRL--STIRNADKIA 558 (1228)
T ss_pred cCCC-CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEEEeeeh--hhhhccCEEE
Confidence 9832 22999999999999999999999999999999999999999999998875 66777776654 5667799999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChH-HH--HHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCc----
Q 000615 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVA-DF--LQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFH---- 488 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~a-df--l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---- 488 (1389)
+|++|+|+++|+++|+++. .+.. +. +|+....++.+ . .... ..++.....+.+.
T Consensus 559 v~~~G~IvE~G~h~ELi~~-----------~G~Y~~lv~~Q~~~~~~~~~-~---~~~~----~~~~~~~s~~~s~~~~~ 619 (1228)
T KOG0055|consen 559 VMEEGKIVEQGTHDELIAL-----------GGIYSSLVRLQELEKAAEDE-E---EEES----LKEERSRSLKSSSSSPS 619 (1228)
T ss_pred EEECCEEEEecCHHHHHhc-----------cchHHHHHHHHhhhhhhhcc-c---cccc----hhhhhhhcccccccccc
Confidence 9999999999999999862 0111 11 12221111100 0 0000 0000000000000
Q ss_pred cchh-HHhhh--cCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhh---hcc
Q 000615 489 MGQQ-IASDL--RVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTV---YFR 562 (1389)
Q Consensus 489 ~~~~-~~~~l--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tv---f~~ 562 (1389)
.... ..... ..+.++....+. .......+.|+.++.+. .+|..+.-.......+-....+.+++++.+ |+.
T Consensus 620 ~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~s~~~i~k~~~-pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~ 696 (1228)
T KOG0055|consen 620 LSRGSNRSNLLSVKPEGEDPEEPV--SEEDEKVSFWRIFKLNK-PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYP 696 (1228)
T ss_pred ccCCcccccccccccccccccccc--ccccccccHHHHHHhcc-chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 0000 00000 000000000000 01112334444443322 133222111111112222223333333332 222
Q ss_pred ccCCCCCCCCcchhHHHHHHHHH----------HHHHHHHHHHHHHHhhhhhhhh--hhcCcccchhh--HHHH-HHHHH
Q 000615 563 TEMSVGDMNGGSRYFGALFFSLL----------NIMFNGFAENAMTVLRLPIFYK--QRDHLFYPSWA--FALP-IWLLR 627 (1389)
Q Consensus 563 ~~~~~~~~~~~~~~~g~lff~ll----------~~~~~~~~~~~~~~~~~~vf~k--~r~~~~y~~~a--~~la-~~l~~ 627 (1389)
.+. +.+......+..+|.++. ..+|.-..|....-.|...|.+ ..+..||.--- -.+. ....+
T Consensus 697 ~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~D 774 (1228)
T KOG0055|consen 697 PDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATD 774 (1228)
T ss_pred CCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcc
Confidence 211 111111222444443332 2233344444444444444433 11222221110 0111 11111
Q ss_pred hc---------HH----HHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH---------H
Q 000615 628 IP---------IS----ILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEV---------I 685 (1389)
Q Consensus 628 iP---------~~----~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~---------~ 685 (1389)
.| ++ .+.+++.+++.-|..|+....--...+.++. .......+++........ .
T Consensus 775 a~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~----~~~~~~~~~~~~~~~~~~~~~~ea~~iA 850 (1228)
T KOG0055|consen 775 ASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLI----LSGYLQKKFLKGFSKDDKKAYEEASKIA 850 (1228)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 11 11 1111122222222222211111000000000 000000111111100000 0
Q ss_pred HHHHHHHHHH--------HHHHHHhhccccCC--c-hhhHH-HHHHHc-HHHHHHHHHHHHHhcCCccccCCCCCCCccc
Q 000615 686 SNTLGTFILL--------IMMSLGGFVMAKDD--I-EPFLR-WGYYIS-PMMYGQTSLLVNEFLGGRWDAQNKDPSINQP 752 (1389)
Q Consensus 686 a~~~~~~~~~--------~~~l~~Gf~i~~~~--i-p~~~~-W~~~is-p~~y~~~al~~nef~~~~~~~~~~~~~~~~~ 752 (1389)
.-.+..+=.+ ++-++.--...+.. + ..+|. ..+-++ .+.|...++.. +.+...-. .
T Consensus 851 ~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f--~~G~~Li~---~------ 919 (1228)
T KOG0055|consen 851 IEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSF--WYGARLIS---N------ 919 (1228)
T ss_pred HHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHh---c------
Confidence 0000000000 00000000000000 0 00110 011111 11222222211 11100000 0
Q ss_pred ccccccccccCccccCchhhHHHHHHHHHHHHHHHHH-HHHHHhcCCCCCCCceeeeccchhhhccCcccchhhhhhccc
Q 000615 753 TIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLF-IAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSS 831 (1389)
Q Consensus 753 ~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (1389)
|. ...... +-.+ ..+.|.... .-+..|.. +..+...+....-...+..+
T Consensus 920 --g~-------~~~~~~-----~~vf--~~l~~ta~~~~~~~s~~P-----------d~~ka~~Aa~~iF~i~dr~~--- 969 (1228)
T KOG0055|consen 920 --GE-------MTFEDV-----FRVF--MALSFTAMALGQASSYAP-----------DISKAKIAAGSIFEILDRKP--- 969 (1228)
T ss_pred --CC-------cCHHHH-----HHHH--HHHHHHHHHHHHHHhhCc-----------HHHHHHHHHHHHHHHhcCCC---
Confidence 00 000000 0000 000010000 00111111 00011000000000000000
Q ss_pred ccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHh
Q 000615 832 SKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMD 911 (1389)
Q Consensus 832 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~ 911 (1389)
..+.....+...+.....++|+||++.+|..+ +.++|+|+|++|++|+.+||+|||||||||.+.
T Consensus 970 -----~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~ 1034 (1228)
T KOG0055|consen 970 -----TIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVIS 1034 (1228)
T ss_pred -----CCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHH
Confidence 00000012223344445799999999987644 467999999999999999999999999999999
Q ss_pred hhcCCCCCceEEEEEEEcCccCC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHH
Q 000615 912 VLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMEL 988 (1389)
Q Consensus 912 ~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~ 988 (1389)
+|-+..+ +..|.|.|||.++. ...+|+++|.|.|+|.++. -|++||+.|+. .+.+.++ +.++++.
T Consensus 1035 LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~ 1102 (1228)
T KOG0055|consen 1035 LLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKL 1102 (1228)
T ss_pred HHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHH
Confidence 9997654 45899999998864 4678899999999999975 59999999981 1133332 3444444
Q ss_pred cC-------CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000615 989 VE-------LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1061 (1389)
Q Consensus 989 l~-------L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~ 1061 (1389)
.+ |.+-.|+.+|..|. +||||||||++||||+++||+||||||+||+||+++.+.|+++|++.. .|+|.|+
T Consensus 1103 ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~Iv 1180 (1228)
T KOG0055|consen 1103 ANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIV 1180 (1228)
T ss_pred hhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEE
Confidence 33 44456888886654 699999999999999999999999999999999999999999999975 6999999
Q ss_pred EecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1062 TIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1062 ~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
++|++| ..+.+|.+.+++ +|++++.|..
T Consensus 1181 IAHRLS--TIqnaD~I~Vi~-~G~VvE~GtH 1208 (1228)
T KOG0055|consen 1181 IAHRLS--TIQNADVIAVLK-NGKVVEQGTH 1208 (1228)
T ss_pred Eecchh--hhhcCCEEEEEE-CCEEEecccH
Confidence 999976 678899999998 5899999984
No 13
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-71 Score=711.59 Aligned_cols=749 Identities=22% Similarity=0.297 Sum_probs=425.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
.+.|+|||+.|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .++||+|++|++. .|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~n-gTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQN-GTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhhC-CcHH
Confidence 34899999999999999999999999999999999999875 99999998 4899999999995 6999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
|||.|+.... .+||+...+.|..++|..+ |+.+..|.||+ .+-.|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~--------------------------------Lp~GD~TeIGE-rGinL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEI--------------------------------LPFGDLTEIGE-RGINL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhh--------------------------------cCCCCcceecC-CccCC
Confidence 9999986543 2455555555544443322 55677799997 33448
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHH-HHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICK-FLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~-~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
||||||||++|||++.+++|++||+|.|++|+++..+|.+ +++.+- .++|+|+++|| .+....+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVTHq--l~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVTHQ--LQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEeCc--hhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999985 554433 46899998885 478899999999999999
Q ss_pred EEecChhHHHH---HHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 423 VYQGPRDNVLE---FFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 423 v~~G~~~~~~~---~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
+..|+++|+.+ +|+++ ...++ ..++.. ...+.+.......+ .+. +.. .......+.
T Consensus 721 ~~~Gty~el~~~~~~~~~l-~~~~~------------~~~~~~---~~~~~~~~~~~~~~-~~~-~~~---~~~~~~~~~ 779 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-AHEEE------------SEQEEE---ASEKDLESGESSRE-SES-RSL---ESLSSEEEK 779 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-hhccc------------hhhccc---cccccccccccccc-hhh-hhh---hhhcccccc
Confidence 99999999984 33332 00000 000000 00000000000000 000 000 000000000
Q ss_pred -CCCcc-cCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHH----HHHHHHhhhccccCCCCCC--
Q 000615 500 -PYDKS-QAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYI-FKTFQLTF----MSLICMTVYFRTEMSVGDM-- 570 (1389)
Q Consensus 500 -~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~-~~~~~~~i----~ali~~tvf~~~~~~~~~~-- 570 (1389)
..++. +......+.++.|...|..++.+++... ...... +-+.+... ++.-.+..||-........
T Consensus 780 ~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~-----g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 780 SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAG-----GFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred cccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 00000 0001111223567788888888876411 111111 11111111 1111222233222111111
Q ss_pred CCcchhHHHH-HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCc
Q 000615 571 NGGSRYFGAL-FFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYD 649 (1389)
Q Consensus 571 ~~~~~~~g~l-ff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~ 649 (1389)
.+...|.+.. ++++...++..+..+.+.......-.+-++ .+-..+.+.|++||+++
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~---------~ml~~Ilrapm~FFdtT------------- 912 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD---------KLLNSILRAPMSFFDTT------------- 912 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHhCcchhcCCC-------------
Confidence 1222222221 111111111111111111111111111111 12234677788887775
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH--H----hccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHH
Q 000615 650 PAASRFFKQFLAFFSIHNMSLPLYRLVA--A----VGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPM 723 (1389)
Q Consensus 650 ~~~~~ff~~~l~~~~~~~~~~~l~~~ia--a----~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~ 723 (1389)
..||.+++|..+........+...... + ++--.+++.....+++.++. +.++||....
T Consensus 913 -P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~p---------------l~v~~~~~~~ 976 (1381)
T KOG0054|consen 913 -PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIP---------------LGVIYYFVQR 976 (1381)
T ss_pred -CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHH---------------HHHHHHHHHH
Confidence 456677776665555544333221111 0 00000111111111111111 1223333333
Q ss_pred HHHHHHHHHHHhcCCccccCCCCCCCcc---cccccccccccCccccCc----------------------hhhHHHH--
Q 000615 724 MYGQTSLLVNEFLGGRWDAQNKDPSINQ---PTIGKVLLKIRGFSTESN----------------------WYWIGVG-- 776 (1389)
Q Consensus 724 ~y~~~al~~nef~~~~~~~~~~~~~~~~---~~~G~~~l~~~~~~~~~~----------------------~~w~~~~-- 776 (1389)
+|--.+.-+....+. ...|.+++ ...|... ++.|..+.. -.|.++.
T Consensus 977 ~Y~~tsReLkRLesi-----tRSPi~sh~~Etl~GlsT--IRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle 1049 (1381)
T KOG0054|consen 977 YYLATSRELKRLESI-----TRSPIYSHFSETLQGLST--IRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLE 1049 (1381)
T ss_pred HHHHHhHHHHHhhhc-----ccchHHHhHHHHhcCcce--eeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 443333332222111 11121111 0112111 111111110 1133322
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCc-----eeeeccchhhhc--cCcccchhhhhhccc---ccccc----------
Q 000615 777 ALTGYSFLFNFLFIAALAYLNPIGDSNS-----TVIEEDGEKQRA--SGHEAEGMQMAVRSS---SKTVG---------- 836 (1389)
Q Consensus 777 ~l~~~~~~f~~l~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~---------- 836 (1389)
.+-...+++..++.+ +........+.. +...-.+..... ...+.+..+.++++. ....+
T Consensus 1050 ~ig~~~v~~~al~~v-l~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~ 1128 (1381)
T KOG0054|consen 1050 LLGNLVVLIAALFAV-LLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESR 1128 (1381)
T ss_pred HHHHHHHHHHHHHHH-HccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCC
Confidence 221222221111111 111110000000 000000000000 000000000000000 00000
Q ss_pred cccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCC
Q 000615 837 AAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGR 916 (1389)
Q Consensus 837 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~ 916 (1389)
...+|+.. ..++|+|++..+.. +-..+|||||++|+|||++||+|++|||||||+++|.+.
T Consensus 1129 pp~~WP~~--------G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl 1189 (1381)
T KOG0054|consen 1129 PPPSWPSK--------GEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRL 1189 (1381)
T ss_pred CCCCCCCC--------CeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHh
Confidence 11222222 46899997655432 224699999999999999999999999999999999987
Q ss_pred CCCceEEEEEEEcCccCCh---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc
Q 000615 917 KTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS 993 (1389)
Q Consensus 917 ~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~ 993 (1389)
.. +.+|+|.|||.++.+ .++|++++.+||+|.++. +.+|.|.|+..+..++.++++||.++|++
T Consensus 1190 ~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-----------GTvR~NLDPf~e~sD~~IW~ALe~~~Lk~ 1256 (1381)
T KOG0054|consen 1190 VE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-----------GTVRFNLDPFDEYSDDEIWEALERCQLKD 1256 (1381)
T ss_pred cC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-----------CccccccCcccccCHHHHHHHHHHhChHH
Confidence 65 357999999998765 568899999999998754 44555557777888889999999999987
Q ss_pred ccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 000615 994 LNDSMVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1067 (1389)
Q Consensus 994 ~~~~~~g------~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1067 (1389)
......+ .++..++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+..+ +||||++.|+.+
T Consensus 1257 ~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~ 1335 (1381)
T KOG0054|consen 1257 VVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN 1335 (1381)
T ss_pred HHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc
Confidence 6543322 135578999999999999999999999999999999999999999999999874 799999999975
Q ss_pred HHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1068 IDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1068 ~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
....+|+|+||++ |+++++|++.
T Consensus 1336 --TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1336 --TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred --hhhhcCeEEEeeC-CeEeecCChH
Confidence 5678999999985 8999999874
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.4e-69 Score=724.13 Aligned_cols=217 Identities=25% Similarity=0.393 Sum_probs=186.8
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..++ .+++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|++.
T Consensus 1937 ~L~v~nLsK~Y~-----------~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYS-----------GTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEEC-----------CCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 477888876542 1125699999999999999999999999999999999997653 479999999876
Q ss_pred Ch--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998776653 233444567889999999999888875 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...||++++|. +|++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~-~G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMV-KGAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999976 6778899999998 489999998
Q ss_pred CC
Q 000615 1092 LG 1093 (1389)
Q Consensus 1092 ~~ 1093 (1389)
..
T Consensus 2154 ~q 2155 (2272)
T TIGR01257 2154 IQ 2155 (2272)
T ss_pred HH
Confidence 63
No 15
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-72 Score=704.91 Aligned_cols=533 Identities=26% Similarity=0.421 Sum_probs=457.0
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1389)
.++++|+||+|.++||.+|||||+|||||||||++|||+.... .++|+|.+||++.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G-~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGG-YIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccc-eEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 5678999999999999999999999999999999999997653 579999999999987777899999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|||.|.|+|.++.+.+ +...|| ...+|+|++.++|++++|.+||+.. .
T Consensus 881 VrESL~fSA~LRlp~~-------v~~~ek------------------------~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKE-------VSDEEK------------------------YEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCc-------CCHHHH------------------------HHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 9999999998875432 222222 2358999999999999999999876 9
Q ss_pred CCChhHhhHHHHHHHHhcCC-cEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc-C
Q 000615 342 GISGGQKKRVTTGEMLVGTA-NVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS-E 419 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p-~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~-~ 419 (1389)
|||.+||||++||..|+.+| .||||||||||||+.++..|++.+|++++ .|.||+|++|||+.++++.||++++|. .
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999998 689999999999999999999999996 5
Q ss_pred CeEEEecChhH----HHHHHHhcC-CCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHH
Q 000615 420 GQIVYQGPRDN----VLEFFEHMG-FKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIA 494 (1389)
Q Consensus 420 G~iv~~G~~~~----~~~~F~~lG-~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 494 (1389)
|+.||.||..+ +++||++.| .+||...|||||+.|+++...+.. ...++++.|++|..+++..
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 89999999754 567999987 899999999999999987643321 1237899999999888877
Q ss_pred hhhcCCCCcccC-CCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCc
Q 000615 495 SDLRVPYDKSQA-HPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1389)
Q Consensus 495 ~~l~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1389)
++++.-.+..+. ........+|..+.|.|++.|++|+++..||++.....|++..++.++++|+.||+.+. +.++.
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 665432221111 22333456688999999999999999999999999999999999999999999999883 45666
Q ss_pred chhHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchH
Q 000615 574 SRYFGALFFSLLNIMFNGF-AENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1389)
Q Consensus 574 ~~~~g~lff~ll~~~~~~~-~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1389)
++.++++|.+++....+.. ........++-+++|||..+.|+..+|+++.++.++|+.++.+++|.++.|+++||...+
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a 1232 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTA 1232 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhH
Confidence 7788888887765543322 244455568889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHH
Q 000615 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1389)
Q Consensus 653 ~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 732 (1389)
.+++.+++..+........++.++.+++|+...|..+.+++..++.+|+||++|++.||.||+|+||+||+.|..++++.
T Consensus 1233 ~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~ 1312 (1391)
T KOG0065|consen 1233 SKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLIS 1312 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHH
Confidence 99999988888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccCCCCCC----CcccccccccccccC
Q 000615 733 NEFLGGRWDAQNKDPS----INQPTIGKVLLKIRG 763 (1389)
Q Consensus 733 nef~~~~~~~~~~~~~----~~~~~~G~~~l~~~~ 763 (1389)
..+++..-.|...+.. .+..+.|+.+...++
T Consensus 1313 ~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~ 1347 (1391)
T KOG0065|consen 1313 SQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFG 1347 (1391)
T ss_pred HHhCCCceeeecCCccccCCCCCcCHHHHHHHHhc
Confidence 9998765555432211 123455555544444
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.2e-67 Score=716.17 Aligned_cols=212 Identities=24% Similarity=0.291 Sum_probs=178.4
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 36999999987742 123599999999999999999999999999999999997653 47999999998
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
+. ...+|+.++||||++.++.. |++|||.+.. +. .++.++++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 64 35688899999999999875 9999996531 11 23447888888887654 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||+||||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||++++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999985 4899999999975 5678999999985
Q ss_pred CcEEEEecCCC
Q 000615 1083 GGRVIYAGPLG 1093 (1389)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1389)
|++++.|++.
T Consensus 1448 -G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 -GRVVEFDTPE 1457 (1622)
T ss_pred -CEEEEeCCHH
Confidence 8999999864
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-66 Score=710.84 Aligned_cols=211 Identities=22% Similarity=0.279 Sum_probs=177.8
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 36899999987731 124599999999999999999999999999999999997653 47999999998
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1389)
+. ...+|+.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 64 45678899999999999875 9999996531 122 33478888888886543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||++++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999974 5678999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|++
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 899999985
No 18
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.9e-65 Score=692.50 Aligned_cols=217 Identities=19% Similarity=0.306 Sum_probs=178.6
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc------------
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 920 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g------------ 920 (1389)
..++|+||+|.++.. ++..+|+|+|++|+||+.+||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999987521 1246999999999999999999999999999999999965431
Q ss_pred ----------------------------------------eEEEEEEEcCccCC---hhhhhheeeEeccCCCCCCCCCH
Q 000615 921 ----------------------------------------YIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 921 ----------------------------------------~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|.+||.++. ...+|+.+|||+|++.++ ..|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 14799999999863 467889999999999987 5799
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
+|||.|+. .+.+. +.++++++..++.++ .|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 12232 336777777776543 46777754 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhCeEEEEecC---cE-EEEecCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG---GR-VIYAGPL 1092 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~l~l~~g---G~-~~~~g~~ 1092 (1389)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|++++|+++ |+ +++.|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999975 57889999999862 66 5578874
No 19
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.5e-65 Score=605.97 Aligned_cols=474 Identities=27% Similarity=0.353 Sum_probs=357.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CCceeEEEECCeeCCCCCc-------CceEEEecCCC-
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFVP-------QRTCAYISQHD- 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 254 (1389)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 4568999999997755432 26799999996
Q ss_pred -CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccc
Q 000615 255 -LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1389)
Q Consensus 255 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 333 (1389)
.+-|-+||.+.|.-..+.++... ..+....+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 45566899988865544332111 01122346778999999987655
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
+.+.+.|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.++.|.+++++. |...-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~IT-HDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFIT-HDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEc-CCHHHHHHhcCe
Confidence 4566779999999999999999999999999999999999999999999999988776666655 555678899999
Q ss_pred EEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhH
Q 000615 414 IILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQI 493 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 493 (1389)
|+||.+|++++.|+.+++..- |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999998641 11 01100 00
Q ss_pred HhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCc
Q 000615 494 ASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1389)
Q Consensus 494 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1389)
.+. .|.. .....
T Consensus 255 l~a--~p~~-----------------------------------------------------------------~~~~~- 266 (539)
T COG1123 255 LAA--VPRL-----------------------------------------------------------------GDEKI- 266 (539)
T ss_pred Hhh--CCCc-----------------------------------------------------------------ccccc-
Confidence 000 0000 00000
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHH
Q 000615 574 SRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAAS 653 (1389)
Q Consensus 574 ~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 653 (1389)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHH
Q 000615 654 RFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVN 733 (1389)
Q Consensus 654 ~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 733 (1389)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchh
Q 000615 734 EFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEK 813 (1389)
Q Consensus 734 ef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 813 (1389)
.+. ....+
T Consensus 267 -----~~~-~~~~~------------------------------------------------------------------ 274 (539)
T COG1123 267 -----IRL-PRRGP------------------------------------------------------------------ 274 (539)
T ss_pred -----ccc-ccccc------------------------------------------------------------------
Confidence 000 00000
Q ss_pred hhccCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCC
Q 000615 814 QRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPG 893 (1389)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G 893 (1389)
.+ ...-++++|++-.+..+.... ....+...+++||||.+++|
T Consensus 275 ----------------------------------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~G 317 (539)
T COG1123 275 ----------------------------------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREG 317 (539)
T ss_pred ----------------------------------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCC
Confidence 00 001233444433222211000 00012357999999999999
Q ss_pred eEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC--C---hhhhhheeeEeccCC--CCCCCCCHHHHHHHHHH
Q 000615 894 VLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK--N---QETFARVSGYCEQND--IHSPYVTVYESLLYSAW 966 (1389)
Q Consensus 894 e~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~ 966 (1389)
|++||+|+||||||||.++|+|...+ ..|.|.++|.+. + ....++.+-+++|++ .+.|.+||++.+.....
T Consensus 318 E~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~ 395 (539)
T COG1123 318 ETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLR 395 (539)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHh
Confidence 99999999999999999999998764 479999999762 1 223556778888876 47899999999977654
Q ss_pred hhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHH
Q 000615 967 LRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1389)
Q Consensus 967 lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i 1045 (1389)
..... ...++++++.++++.++|.. +.++. +..||||||||++|||||+.+|++|++|||||.||+..+..|
T Consensus 396 ~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~V 468 (539)
T COG1123 396 IHGGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQV 468 (539)
T ss_pred hhccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHH
Confidence 44322 24566778999999999985 45555 458999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1046 MRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1046 ~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
.++|+++.++ |.|.|+||||.+ -+.+.||++++|. .|++++.||.
T Consensus 469 lnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~-~G~iVE~G~~ 514 (539)
T COG1123 469 LNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMY-DGRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEE-CCeEEEeCCH
Confidence 9999999765 999999999987 4778899999998 5899999974
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.3e-64 Score=687.24 Aligned_cols=212 Identities=21% Similarity=0.218 Sum_probs=178.2
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++.++.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999887421 1359999999999999999999999999999999999765 347999999998
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1389)
+. ...+|+.++||||++.+++. |++|||.... +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 64 35678899999999999876 9999995211 122 33478889988886543 5555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|+
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld- 1493 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLD- 1493 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-
Confidence 35799999999999999999999999999999999999999999999875 4899999999964 677899999998
Q ss_pred CcEEEEecCCC
Q 000615 1083 GGRVIYAGPLG 1093 (1389)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1389)
+|++++.|++.
T Consensus 1494 ~G~IvE~G~~~ 1504 (1522)
T TIGR00957 1494 KGEVAEFGAPS 1504 (1522)
T ss_pred CCEEEEECCHH
Confidence 58999999863
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-64 Score=624.38 Aligned_cols=460 Identities=23% Similarity=0.331 Sum_probs=348.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|||+++++|++++|+||||||||||+++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 46999999999999999999999999999999999998861 128999999998865432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.|+......+. .... +....++.+++.+||++..++.+++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-------MDYD------------------------AMYLRAQKLLAQLKLDINPATPVGN-- 143 (506)
T ss_pred CcHHHHhhhcccccccCC-------cCHH------------------------HHHHHHHHHHHHcCCCCCcccchhh--
Confidence 999999988643210000 0000 0012356688999999888888876
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.++||+|++|++
T Consensus 144 ---LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~tH~-~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 144 ---LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYISHK-LNEVKAISDTICVIRD 218 (506)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCc-HHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999999999999999975 46777776654 4578889999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 420 G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
|++++.|+.+++.. .+. .+.+
T Consensus 219 G~i~~~~~~~~~~~---------------~~~-----------------------------~~~~--------------- 239 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DDI-----------------------------ITMM--------------- 239 (506)
T ss_pred CEEeeecccccCCH---------------HHH-----------------------------HHHh---------------
Confidence 99998886543210 000 0000
Q ss_pred CCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHH
Q 000615 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1389)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1389)
.... .
T Consensus 240 -------------------------------------------------------------~~~~-----~--------- 244 (506)
T PRK13549 240 -------------------------------------------------------------VGRE-----L--------- 244 (506)
T ss_pred -------------------------------------------------------------hCcC-----c---------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000615 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1389)
Q Consensus 580 lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 659 (1389)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000615 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1389)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1389)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccCc
Q 000615 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1389)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1389)
. . . + +
T Consensus 245 ------~----~------~-----~---------------------------------~--------------------- 249 (506)
T PRK13549 245 ------T----A------L-----Y---------------------------------P--------------------- 249 (506)
T ss_pred ------c----c------c-----c---------------------------------c---------------------
Confidence 0 0 0 0 0
Q ss_pred ccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEe
Q 000615 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1389)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1389)
.. . . . . ....++++|+++.++. .+++.+|+||||+|++||++||+
T Consensus 250 ------~~--~----~--~---~--------~~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~ 294 (506)
T PRK13549 250 ------RE--P----H--T---I--------GEVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIA 294 (506)
T ss_pred ------cc--c----c--C---C--------CCceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEe
Confidence 00 0 0 0 0 0012456666643310 01245999999999999999999
Q ss_pred ccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCC---CCCCCCCHHHHHHHHHHhhcC--
Q 000615 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLS-- 970 (1389)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~lr~~-- 970 (1389)
||||||||||+++|+|...+ +.+|+|.++|.+... ...++.++|++|++ .+++.+||.||+.+.......
T Consensus 295 G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (506)
T PRK13549 295 GLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGG 373 (506)
T ss_pred CCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccC
Confidence 99999999999999997541 137999999976532 12345689999985 467889999999875321111
Q ss_pred CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHH
Q 000615 971 SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1049 (1389)
Q Consensus 971 ~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l 1049 (1389)
.....++..+.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|
T Consensus 374 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l 448 (506)
T PRK13549 374 SRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLI 448 (506)
T ss_pred cccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHH
Confidence 0012233445689999999996 4666664 479999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1050 RNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1050 ~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
++++++|+|||++||+++ ++.+.||++++|.+ |+++..|+..+
T Consensus 449 ~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 449 NQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999888999999999986 57788999999985 89988887654
No 22
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.2e-64 Score=621.93 Aligned_cols=450 Identities=22% Similarity=0.342 Sum_probs=345.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999887 9999999998754321 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.|+......... .... +....++.+++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGR------IDWK------------------------KMYAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccccCc------cCHH------------------------HHHHHHHHHHHHcCCCCCccCchhh--
Confidence 9999999886432100000 0000 0012356688999999888888887
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|+ ..++.++||+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvii~sHd-~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-QGRGIVYISHR-LKEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999875 36677776654 4588899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 420 G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
|+++..|+.+++.. .+ ..+.+
T Consensus 217 G~i~~~~~~~~~~~---------------~~-----------------------------~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE---------------DS-----------------------------LIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH---------------HH-----------------------------HHHHh---------------
Confidence 99998776543210 00 00000
Q ss_pred CCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHH
Q 000615 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1389)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1389)
+ .
T Consensus 238 -------------------------------------------------------------~--~--------------- 239 (501)
T PRK10762 238 -------------------------------------------------------------V--G--------------- 239 (501)
T ss_pred -------------------------------------------------------------c--C---------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000615 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1389)
Q Consensus 580 lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 659 (1389)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK10762 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000615 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1389)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1389)
.+
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK10762 240 ------------------------------------------------------------------------------RK 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccCc
Q 000615 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1389)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1389)
.....+.
T Consensus 242 ~~~~~~~------------------------------------------------------------------------- 248 (501)
T PRK10762 242 LEDQYPR------------------------------------------------------------------------- 248 (501)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 0000000
Q ss_pred ccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEe
Q 000615 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1389)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1389)
. . . + + .+..++++|++. .+|+|+||+|++||++||+
T Consensus 249 ------~--------~--~---~------~-~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~li 284 (501)
T PRK10762 249 ------L--------D--K---A------P-GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVS 284 (501)
T ss_pred ------c--------c--c---C------C-CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEe
Confidence 0 0 0 0 0 001245666541 2699999999999999999
Q ss_pred ccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCC---CCCCCCCHHHHHHHHHHhhc-C-
Q 000615 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRL-S- 970 (1389)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~lr~-~- 970 (1389)
||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++ .+++.+||.|++.+...... .
T Consensus 285 G~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 362 (501)
T PRK10762 285 GLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA 362 (501)
T ss_pred cCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccc
Confidence 99999999999999997653 47999999976532 12345699999996 57788999999987532110 0
Q ss_pred -CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHH
Q 000615 971 -SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1389)
Q Consensus 971 -~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1048 (1389)
.....++.++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+.+.
T Consensus 363 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 437 (501)
T PRK10762 363 GGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQL 437 (501)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 0012233345688999999995 5666664 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1049 l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
|++++++|+|||++||+++ ++.+.||++++|.+ |+++..|+...
T Consensus 438 l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 438 INQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 9999878999999999986 57788999999985 88998887653
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-64 Score=624.93 Aligned_cols=458 Identities=22% Similarity=0.299 Sum_probs=346.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 46999999999999999999999999999999999999887 8999999998865432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++...... .+.. ...... +....++.+++.+||++..|+.+++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~-~~~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~-- 145 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV-NIIDWR------------------------EMRVRAAMMLLRVGLKVDLDEKVAN-- 145 (510)
T ss_pred CcHHHHhhhccccccc--cccc-cccCHH------------------------HHHHHHHHHHHHcCCCCCcccchhh--
Confidence 9999999875321000 0000 000000 0112356788999999888988877
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +.|+|++.| ...++.+++|+|++|++
T Consensus 146 ---LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tiiivsH-d~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 146 ---LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE-GTAIVYISH-KLAEIRRICDRYTVMKD 220 (510)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeC-CHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999764 677776655 45688899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 420 G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
|++++.|+++++.. .+.. +..
T Consensus 221 G~i~~~g~~~~~~~---------------~~~~-----------------------------~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DDIV-----------------------------RLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH---------------HHHH-----------------------------HHh---------------
Confidence 99999887765310 0000 000
Q ss_pred CCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHH
Q 000615 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1389)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1389)
.... ..
T Consensus 242 -------------------------------------------------------------~~~~-----~~-------- 247 (510)
T PRK09700 242 -------------------------------------------------------------VGRE-----LQ-------- 247 (510)
T ss_pred -------------------------------------------------------------cCCC-----cc--------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000615 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1389)
Q Consensus 580 lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 659 (1389)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000615 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1389)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1389)
..
T Consensus 248 ------------------------------------------------------------------------------~~ 249 (510)
T PRK09700 248 ------------------------------------------------------------------------------NR 249 (510)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccCc
Q 000615 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1389)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1389)
. .. . .
T Consensus 250 ~----~~----~-------------------------------------------------------------~------ 254 (510)
T PRK09700 250 F----NA----M-------------------------------------------------------------K------ 254 (510)
T ss_pred c----cc----c-------------------------------------------------------------c------
Confidence 0 00 0 0
Q ss_pred ccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEe
Q 000615 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1389)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1389)
+.. . .. . .+..++++|++... ..+|+|||++|++||++||+
T Consensus 255 ---------~~~---~-~~---~--------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~ 295 (510)
T PRK09700 255 ---------ENV---S-NL---A--------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFA 295 (510)
T ss_pred ---------ccc---c-cC---C--------CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEE
Confidence 000 0 00 0 01135677766321 13899999999999999999
Q ss_pred ccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccC---CCCCCCCCHHHHHHHHHHhh---c
Q 000615 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQN---DIHSPYVTVYESLLYSAWLR---L 969 (1389)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~E~l~f~~~lr---~ 969 (1389)
||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|+ ..+++.+||.|++.+....+ .
T Consensus 296 G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (510)
T PRK09700 296 GLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGY 373 (510)
T ss_pred CCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccc
Confidence 99999999999999997653 47999999976532 1234578999998 45788999999998753211 0
Q ss_pred CC--C-CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHH
Q 000615 970 SS--D-VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1389)
Q Consensus 970 ~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i 1045 (1389)
.. . .......+.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l 448 (510)
T PRK09700 374 KGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEI 448 (510)
T ss_pred cccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHH
Confidence 00 0 11222335678999999996 6677764 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1046 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1046 ~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
++.|++++++|.|||++||++. ++.+.||++++|.+ |+++..++.
T Consensus 449 ~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 449 YKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999878999999999986 57788999999985 788887764
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-63 Score=630.70 Aligned_cols=488 Identities=20% Similarity=0.236 Sum_probs=351.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCC----------CC------c-Cce
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----------FV------P-QRT 246 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----------~~------~-~~~ 246 (1389)
.++|+|||+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|..+.. .. . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999887 8999999975421 11 1 246
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHhhhcc-CCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHH
Q 000615 247 CAYISQHD--LHHGEMTVRETLDFSGRCL-GVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLK 323 (1389)
Q Consensus 247 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ 323 (1389)
++||+|++ .+++.+||+||+.++.+.. +.. +. +....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------RE------------------------EAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHH
Confidence 99999997 6788899999999875421 110 00 01123567889
Q ss_pred HhCCcc---cccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEE
Q 000615 324 ILGLDI---CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVAL 400 (1389)
Q Consensus 324 ~lgL~~---~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~ 400 (1389)
.+||++ ..+..+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++..+.|+|++.
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~it 226 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFIT 226 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 999964 46777766 9999999999999999999999999999999999999999999999865567766655
Q ss_pred ecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHH
Q 000615 401 LQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDF 480 (1389)
Q Consensus 401 ~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 480 (1389)
|...++.++||+|++|++|++++.|+++++.+ .|.+.-..+++..+
T Consensus 227 -Hdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~~------------------------- 272 (623)
T PRK10261 227 -HDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAAV------------------------- 272 (623)
T ss_pred -CCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhcc-------------------------
Confidence 55568889999999999999999999876531 01000000000000
Q ss_pred HHHHHhCccchhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhh
Q 000615 481 VEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVY 560 (1389)
Q Consensus 481 ~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf 560 (1389)
+.
T Consensus 273 -------------------~~----------------------------------------------------------- 274 (623)
T PRK10261 273 -------------------PQ----------------------------------------------------------- 274 (623)
T ss_pred -------------------Cc-----------------------------------------------------------
Confidence 00
Q ss_pred ccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHH
Q 000615 561 FRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVA 640 (1389)
Q Consensus 561 ~~~~~~~~~~~~~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~ 640 (1389)
. ....+. .
T Consensus 275 --~----~~~~~~------------------------------------~------------------------------ 282 (623)
T PRK10261 275 --L----GAMKGL------------------------------------D------------------------------ 282 (623)
T ss_pred --c----cccccc------------------------------------c------------------------------
Confidence 0 000000 0
Q ss_pred HHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHH
Q 000615 641 LTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYI 720 (1389)
Q Consensus 641 i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~i 720 (1389)
.+. ..+.
T Consensus 283 ----------------------------------------------------------------~~~-~~~~-------- 289 (623)
T PRK10261 283 ----------------------------------------------------------------YPR-RFPL-------- 289 (623)
T ss_pred ----------------------------------------------------------------CCc-cccc--------
Confidence 000 0000
Q ss_pred cHHHHHHHHHHHHHhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000615 721 SPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIG 800 (1389)
Q Consensus 721 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~ 800 (1389)
-....+. .
T Consensus 290 -------------------~~~~~~~----~------------------------------------------------- 297 (623)
T PRK10261 290 -------------------ISLEHPA----K------------------------------------------------- 297 (623)
T ss_pred -------------------ccccccc----c-------------------------------------------------
Confidence 0000000 0
Q ss_pred CCCceeeeccchhhhccCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccc
Q 000615 801 DSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRL 880 (1389)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1389)
.. . .. .. . .... ....++++|+++.++..... .......+
T Consensus 298 ------------~~-~----~~-----------~~--~--~~~~------~~~~L~~~~l~~~y~~~~~~--~~~~~~~~ 337 (623)
T PRK10261 298 ------------QE-P----PI-----------EQ--D--TVVD------GEPILQVRNLVTRFPLRSGL--LNRVTREV 337 (623)
T ss_pred ------------cC-c----cc-----------cc--c--cccC------CCceEEEeeeEEEEcCCCcc--ccccCCce
Confidence 00 0 00 00 0 0000 01136788887665311000 00000124
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCC--CCC
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND--IHS 952 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 952 (1389)
.+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++ .++
T Consensus 338 ~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~ 415 (623)
T PRK10261 338 HAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLD 415 (623)
T ss_pred EEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcC
Confidence 69999999999999999999999999999999999765 347999999986532 12356799999997 578
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
+.+||.|++.+....+. ....++..+++.++++.++|. +..+.. +..|||||||||+|||||+.+|+|||||
T Consensus 416 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllD 488 (623)
T PRK10261 416 PRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIAD 488 (623)
T ss_pred CCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 89999999987643321 112334456789999999995 456665 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
|||+|||+.++..++++|++++++ |.|||++||+++ .+.+.||++++|.+ |++++.|+..
T Consensus 489 EPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 489 EAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999765 899999999986 57788999999985 8999998753
No 25
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.3e-63 Score=616.83 Aligned_cols=453 Identities=21% Similarity=0.282 Sum_probs=343.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 45999999999999999999999999999999999999887 8999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.|..... . + ....++.+++.+||++..++.+++
T Consensus 101 ~tv~e~l~~~~~~~-------------~-~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPKR-------------Q-A------------------------SMQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhcccccc-------------h-H------------------------HHHHHHHHHHHcCCCccccCChhh--
Confidence 99999998753100 0 0 011346678899999888888877
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++.|+ ..++.++||+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tiiivtHd-~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ-GVGIVFISHK-LPEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998763 6777766554 4578899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 420 G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
|++++.|+++++... +.. +.+.. .
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~------------~ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAITP------------A 239 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHhC------------c
Confidence 999999988764210 000 00000 0
Q ss_pred CCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHH
Q 000615 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1389)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1389)
. .. ......
T Consensus 240 ~-----~~------------------------------------------------------------~~~~~~------ 248 (510)
T PRK15439 240 A-----RE------------------------------------------------------------KSLSAS------ 248 (510)
T ss_pred c-----cc------------------------------------------------------------cccccc------
Confidence 0 00 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000615 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1389)
Q Consensus 580 lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 659 (1389)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000615 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1389)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1389)
. .
T Consensus 249 ---------------------------------------------------~---------------------------~ 250 (510)
T PRK15439 249 ---------------------------------------------------Q---------------------------K 250 (510)
T ss_pred ---------------------------------------------------c---------------------------c
Confidence 0 0
Q ss_pred cccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccCc
Q 000615 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1389)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1389)
.. . .+
T Consensus 251 ~~----~----------------~~------------------------------------------------------- 255 (510)
T PRK15439 251 LW----L----------------EL------------------------------------------------------- 255 (510)
T ss_pred cc----c----------------cc-------------------------------------------------------
Confidence 00 0 00
Q ss_pred ccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEe
Q 000615 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1389)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1389)
+.. .. . ... .+..++++|++. .+|+|||++|++|+++||+
T Consensus 256 ---------~~~---~~-~---~~~------~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~ 295 (510)
T PRK15439 256 ---------PGN---RR-Q---QAA------GAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLA 295 (510)
T ss_pred ---------ccc---cc-c---cCC------CCceEEEeCCCC------------------CCccceeEEEcCCcEEEEE
Confidence 000 00 0 000 011256666651 1599999999999999999
Q ss_pred ccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh----hhhheeeEeccCC---CCCCCCCHHHHHHHHHHhhcCCC
Q 000615 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSSD 972 (1389)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~lr~~~~ 972 (1389)
||||||||||+++|+|...+ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+....
T Consensus 296 G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~ 373 (510)
T PRK15439 296 GVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFW 373 (510)
T ss_pred CCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccc
Confidence 99999999999999997553 479999999865321 1245689999984 47788999999864211111100
Q ss_pred CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHH
Q 000615 973 VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1051 (1389)
Q Consensus 973 ~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1051 (1389)
......++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+.+.|++
T Consensus 374 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~ 448 (510)
T PRK15439 374 IKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRS 448 (510)
T ss_pred cChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHH
Confidence 11122335688999999997 6667664 47999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1052 TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1052 ~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
++++|.|||++||+++ ++.+.||++++|. +|++++.|..+
T Consensus 449 l~~~g~tiIivsHd~~-~i~~~~d~i~~l~-~G~i~~~~~~~ 488 (510)
T PRK15439 449 IAAQNVAVLFISSDLE-EIEQMADRVLVMH-QGEISGALTGA 488 (510)
T ss_pred HHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEccc
Confidence 9888999999999986 5778899999998 58999888654
No 26
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.7e-62 Score=669.24 Aligned_cols=211 Identities=23% Similarity=0.262 Sum_probs=178.0
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999987742 12359999999999999999999999999999999999765 347999999998
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
+. ...+|+.++||||++.+++. |++|||... .+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 64 46688999999999999875 999999531 1222 3458899999988764 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1003 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+|+|++ +....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEE
Confidence 357999999999999999996 89999999999999999999999999875 479999999996 4678899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |++++.|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 4 899999985
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4e-63 Score=619.75 Aligned_cols=464 Identities=21% Similarity=0.282 Sum_probs=344.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCCCc-------CceEEEecCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFVP-------QRTCAYISQHD 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 254 (1389)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|. ...+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999862 1138999999998765321 24699999997
Q ss_pred C--CCCCCCHHHHHHHhhhcc-CCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc--
Q 000615 255 L--HHGEMTVRETLDFSGRCL-GVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-- 329 (1389)
Q Consensus 255 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~-- 329 (1389)
. +.+.+||+|++.+..... +.. +. +....++.+++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------RE------------------------AARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHCCCCChH
Confidence 4 567789999987642211 100 00 01123567889999975
Q ss_pred -cccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHH
Q 000615 330 -CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETY 408 (1389)
Q Consensus 330 -~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 408 (1389)
..|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+ ..++.
T Consensus 148 ~~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd-~~~~~ 221 (529)
T PRK15134 148 KRLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHN-LSIVR 221 (529)
T ss_pred HHHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCc-HHHHH
Confidence 35777776 999999999999999999999999999999999999999999999976556777777655 45778
Q ss_pred hhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCc
Q 000615 409 DLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFH 488 (1389)
Q Consensus 409 ~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 488 (1389)
++||+|++|++|++++.|+++++... |.. .+ .
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~----~~-----------------------------~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH----PY-----------------------------T------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC----HH-----------------------------H-------
Confidence 89999999999999999988765310 000 00 0
Q ss_pred cchhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 000615 489 MGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVG 568 (1389)
Q Consensus 489 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~ 568 (1389)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCC
Q 000615 569 DMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGY 648 (1389)
Q Consensus 569 ~~~~~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~ 648 (1389)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHH
Q 000615 649 DPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQT 728 (1389)
Q Consensus 649 ~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 728 (1389)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHHHhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Q 000615 729 SLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIE 808 (1389)
Q Consensus 729 al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~ 808 (1389)
. ..+. .
T Consensus 262 ----------~---~~~~----~--------------------------------------------------------- 267 (529)
T PRK15134 262 ----------S---GDPV----P--------------------------------------------------------- 267 (529)
T ss_pred ----------c---cccc----c---------------------------------------------------------
Confidence 0 0000 0
Q ss_pred ccchhhhccCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeeccee
Q 000615 809 EDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSG 888 (1389)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 888 (1389)
. ...+ +..++++|+++.++...+. .+...+.+.+|+|||+
T Consensus 268 --------------------------~------~~~~------~~~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl 307 (529)
T PRK15134 268 --------------------------L------PEPA------SPLLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISF 307 (529)
T ss_pred --------------------------c------CCCC------CCcccccCcEEEeecCccc--cccccccceeeeccee
Confidence 0 0000 0013455555443210000 0000012469999999
Q ss_pred EEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---hhhheeeEeccCC--CCCCCCCHHHH
Q 000615 889 VFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TFARVSGYCEQND--IHSPYVTVYES 960 (1389)
Q Consensus 889 ~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~--~~~~~lTv~E~ 960 (1389)
+|++||++||+||||||||||+++|+|... .+|+|.++|.++.. . .+++.+||++|++ .+++.+||.|+
T Consensus 308 ~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~ 384 (529)
T PRK15134 308 TLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQI 384 (529)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHH
Confidence 999999999999999999999999999753 37999999976532 1 1345699999997 47788999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 961 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
+.+....+.. .....+.++.++++++.++|. +..+.. +..|||||||||+||++|+.+|++|||||||+|||+
T Consensus 385 l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~ 458 (529)
T PRK15134 385 IEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDK 458 (529)
T ss_pred HHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCH
Confidence 9886533211 122334456688999999996 456665 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1040 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
.++..+++.|++++++ |+|||++||+++ ++.+.||++++|.+ |+++..|+.
T Consensus 459 ~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 459 TVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999865 899999999976 57778999999985 899988874
No 28
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.7e-63 Score=618.32 Aligned_cols=445 Identities=23% Similarity=0.311 Sum_probs=340.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCc--CCCCCceeEEEECC-----------------------eeC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCG-----------------------HEL 238 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G-----------------------~~~ 238 (1389)
+++|+|+|+++.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 566 89999972 221
Q ss_pred C-------CC------CcCceEEEecCC-CCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHH
Q 000615 239 N-------EF------VPQRTCAYISQH-DLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFM 304 (1389)
Q Consensus 239 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~ 304 (1389)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+.. ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~~---------------- 143 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------GK---------------- 143 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------HH----------------
Confidence 1 00 013569999997 67888899999998864322110 00
Q ss_pred HHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHH
Q 000615 305 KAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKF 384 (1389)
Q Consensus 305 ~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~ 384 (1389)
+....++.+++.+||++..+..+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.
T Consensus 144 --------~~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 144 --------EAVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred --------HHHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 0012356789999998888888876 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhh
Q 000615 385 LKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQY 464 (1389)
Q Consensus 385 L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~ 464 (1389)
|+++++..+.|+|++.|.+ ..+.++||+|++|++|++++.|+++++.+.+.. .
T Consensus 211 l~~l~~~~g~tviivtHd~-~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~----------------~---------- 263 (520)
T TIGR03269 211 LEEAVKASGISMVLTSHWP-EVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME----------------G---------- 263 (520)
T ss_pred HHHHHHhcCcEEEEEeCCH-HHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh----------------h----------
Confidence 9999765567777766654 567789999999999999988876654210000 0
Q ss_pred hhccCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHH
Q 000615 465 WFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIF 544 (1389)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~ 544 (1389)
T Consensus 264 -------------------------------------------------------------------------------- 263 (520)
T TIGR03269 264 -------------------------------------------------------------------------------- 263 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHH
Q 000615 545 KTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIW 624 (1389)
Q Consensus 545 ~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~ 624 (1389)
..
T Consensus 264 -------------------------~~----------------------------------------------------- 265 (520)
T TIGR03269 264 -------------------------VS----------------------------------------------------- 265 (520)
T ss_pred -------------------------ch-----------------------------------------------------
Confidence 00
Q ss_pred HHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhc
Q 000615 625 LLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFV 704 (1389)
Q Consensus 625 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~ 704 (1389)
.
T Consensus 266 --------------------------~----------------------------------------------------- 266 (520)
T TIGR03269 266 --------------------------E----------------------------------------------------- 266 (520)
T ss_pred --------------------------h-----------------------------------------------------
Confidence 0
Q ss_pred cccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHH
Q 000615 705 MAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFL 784 (1389)
Q Consensus 705 i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~ 784 (1389)
+. . .. .
T Consensus 267 -----~~--------------------------~------~~----~--------------------------------- 272 (520)
T TIGR03269 267 -----VE--------------------------K------EC----E--------------------------------- 272 (520)
T ss_pred -----hc--------------------------c------cc----c---------------------------------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHhcCCCCCCCceeeeccchhhhccCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceee
Q 000615 785 FNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFV 864 (1389)
Q Consensus 785 f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 864 (1389)
. . . ....++++|+++.+
T Consensus 273 -------------------------------------~------------~------~--------~~~~l~~~~l~~~~ 289 (520)
T TIGR03269 273 -------------------------------------V------------E------V--------GEPIIKVRNVSKRY 289 (520)
T ss_pred -------------------------------------c------------C------C--------CCceEEEeccEEEe
Confidence 0 0 0 00125666766554
Q ss_pred eccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEc-Ccc---CCh-----
Q 000615 865 DMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS-GYP---KNQ----- 935 (1389)
Q Consensus 865 ~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~-g~~---~~~----- 935 (1389)
+.. ..+.+.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++ |.+ ...
T Consensus 290 ~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~~~~~~~~~ 359 (520)
T TIGR03269 290 ISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVDMTKPGPDG 359 (520)
T ss_pred ccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCccccccccchhh
Confidence 210 01124699999999999999999999999999999999997652 47999996 532 111
Q ss_pred -hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCH
Q 000615 936 -ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-----LNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 936 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~~g~~~~~~LSg 1009 (1389)
...++.+||++|++.+++.+||.|++.+...+. ...+..++.+.++++.++|.+ ..++. +..|||
T Consensus 360 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSg 430 (520)
T TIGR03269 360 RGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSE 430 (520)
T ss_pred HHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCH
Confidence 123456999999998889999999998754321 122333456889999999975 34554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.||++++|.+ |+++.
T Consensus 431 Gq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~ 508 (520)
T TIGR03269 431 GERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVK 508 (520)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57788999999985 88888
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 509 ~g~~ 512 (520)
T TIGR03269 509 IGDP 512 (520)
T ss_pred ECCH
Confidence 8864
No 29
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.3e-61 Score=660.76 Aligned_cols=210 Identities=22% Similarity=0.269 Sum_probs=177.7
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999987742 12469999999999999999999999999999999999764 37999999998
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
+. ...+|+.++||||++.+++. |++|||.... . ..++.++++++.++|.+. .|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~----~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------Q----WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------C----CCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 65 35678899999999999875 9999994321 1 124458899999998654 3455554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
+..+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||++++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 4799999999964 6678999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 899999875
No 30
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-62 Score=611.29 Aligned_cols=451 Identities=22% Similarity=0.297 Sum_probs=342.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----cCceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 36999999999999999999999999999999999999887 899999999875432 13579999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++......+. .... +....++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------VNRR------------------------LLNYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccCC-------CCHH------------------------HHHHHHHHHHHHcCCCCCcCCchhh--
Confidence 999999988532100000 0000 0012356688999998877888776
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiitHd~-~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-EGRVILYVSHRM-EEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999875 467777766654 578899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000615 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1389)
Q Consensus 420 G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 499 (1389)
|+++..++..+. . +.++..+.
T Consensus 216 G~i~~~~~~~~~-----------------------~--------------------~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-----------------------V--------------------DRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-----------------------C--------------------CHHHHHHH----------------
Confidence 999854421100 0 00000000
Q ss_pred CCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHHH
Q 000615 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1389)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1389)
+.... .
T Consensus 237 ------------------------------------------------------------~~~~~-----~--------- 242 (501)
T PRK11288 237 ------------------------------------------------------------MVGRE-----I--------- 242 (501)
T ss_pred ------------------------------------------------------------hcCCC-----c---------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHHH
Q 000615 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1389)
Q Consensus 580 lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 659 (1389)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000615 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1389)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1389)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccCc
Q 000615 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1389)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1389)
.. . .
T Consensus 243 ------~~---~---------------------------------------------~---------------------- 246 (501)
T PRK11288 243 ------GD---I---------------------------------------------Y---------------------- 246 (501)
T ss_pred ------cc---c---------------------------------------------c----------------------
Confidence 00 0 0
Q ss_pred ccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEe
Q 000615 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1389)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1389)
. . .+ . . ..+..++++|+++ ..+|+|+|++|++||++||+
T Consensus 247 --~---~-~~-----~-------~------~~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~ii 285 (501)
T PRK11288 247 --G---Y-RP-----R-------P------LGEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLF 285 (501)
T ss_pred --c---c-cc-----c-------C------CCCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEE
Confidence 0 0 00 0 0 0011356666652 13899999999999999999
Q ss_pred ccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCC---CCCCCCCHHHHHHHHHHhhcCC-
Q 000615 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSS- 971 (1389)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~lr~~~- 971 (1389)
||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.+........
T Consensus 286 G~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 363 (501)
T PRK11288 286 GLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRA 363 (501)
T ss_pred cCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccc
Confidence 9999999999999999765 347999999976532 22345789999986 4788999999998753211100
Q ss_pred C--CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHH
Q 000615 972 D--VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1389)
Q Consensus 972 ~--~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1048 (1389)
. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.
T Consensus 364 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 438 (501)
T PRK11288 364 GCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNV 438 (501)
T ss_pred ccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 0 01223345688999999994 5667764 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1049 l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
|+++++.|.|||++|||++ ++.+.||++++|.+ |++++.|..++
T Consensus 439 l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 439 IYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 9999888999999999986 57788999999984 88999887654
No 31
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-62 Score=612.17 Aligned_cols=459 Identities=22% Similarity=0.294 Sum_probs=343.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|||+++++|++++|+||||||||||+++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998761 128999999998865432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccc-cccccCc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA-DTMVGDE 338 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~-dt~vg~~ 338 (1389)
+||+||+.++......+... ... +....++.+++.+||++.. ++.+++
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~- 141 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRM------AYN------------------------AMYLRAKNLLRELQLDADNVTRPVGD- 141 (500)
T ss_pred CcHHHHHHhhcccccccccc------CHH------------------------HHHHHHHHHHHHcCCCCCcccCchhh-
Confidence 99999998864321000000 000 0012356688999998764 566776
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.| ...++.++||+|++|+
T Consensus 142 ----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiitH-d~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 142 ----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-HGVACVYISH-KLNEVKAVCDTICVIR 215 (500)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeC-cHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999975 4667766655 4558889999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhc
Q 000615 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 498 (1389)
+|++++.|+.+++.. .+ ..+
T Consensus 216 ~G~i~~~~~~~~~~~---------------~~-----------------------------~~~---------------- 235 (500)
T TIGR02633 216 DGQHVATKDMSTMSE---------------DD-----------------------------IIT---------------- 235 (500)
T ss_pred CCeEeeecCcccCCH---------------HH-----------------------------HHH----------------
Confidence 999987664322100 00 000
Q ss_pred CCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHH
Q 000615 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1389)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1389)
. +.
T Consensus 236 --------------------------------~----------------------------~~----------------- 238 (500)
T TIGR02633 236 --------------------------------M----------------------------MV----------------- 238 (500)
T ss_pred --------------------------------H----------------------------Hh-----------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 000615 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1389)
Q Consensus 579 ~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~ 658 (1389)
+.
T Consensus 239 --------------------------------------------------------------------~~---------- 240 (500)
T TIGR02633 239 --------------------------------------------------------------------GR---------- 240 (500)
T ss_pred --------------------------------------------------------------------Cc----------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000615 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1389)
Q Consensus 659 ~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 738 (1389)
+ .+.
T Consensus 241 -----------------------------------------------~---~~~-------------------------- 244 (500)
T TIGR02633 241 -----------------------------------------------E---ITS-------------------------- 244 (500)
T ss_pred -----------------------------------------------c---ccc--------------------------
Confidence 0 000
Q ss_pred ccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccC
Q 000615 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1389)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1389)
..+.
T Consensus 245 ----~~~~------------------------------------------------------------------------ 248 (500)
T TIGR02633 245 ----LYPH------------------------------------------------------------------------ 248 (500)
T ss_pred ----cccc------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEE
Q 000615 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1389)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1389)
. . . +. ....++++|+++.+.. .+++.+|+|+||+|++||++||
T Consensus 249 ---~----~-------~------~~-------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l 291 (500)
T TIGR02633 249 ---E----P-------H------EI-------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGV 291 (500)
T ss_pred ---c----c-------c------CC-------CCceEEEeCCcccccc----------cccccccccceeEEeCCcEEEE
Confidence 0 0 0 00 0012566676643210 0123599999999999999999
Q ss_pred eccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCC---CCCCCCCHHHHHHHHHH--hhc
Q 000615 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAW--LRL 969 (1389)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~--lr~ 969 (1389)
+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+|++.+... ...
T Consensus 292 ~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~ 370 (500)
T TIGR02633 292 AGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCF 370 (500)
T ss_pred eCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhcc
Confidence 999999999999999997642 137999999987532 23456799999995 57889999999987532 111
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHH
Q 000615 970 SSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1389)
Q Consensus 970 ~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1048 (1389)
.........++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|||||||+|||+.++..+++.
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 445 (500)
T TIGR02633 371 KMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKL 445 (500)
T ss_pred CCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHH
Confidence 001122334456889999999964 456654 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1049 l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|++++++|.|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 446 l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 446 INQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999888999999999986 57788999999985 788877654
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-61 Score=601.63 Aligned_cols=449 Identities=20% Similarity=0.294 Sum_probs=340.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 9999999998764322 3569999999988999
Q ss_pred CCHHHHHHHhhhc-cCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 260 MTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 260 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
+||+||+.++... .+.. .+.+ +....++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~-------------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF-------------------VDQD-------------KMYRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhcccccccccc-------------------cCHH-------------HHHHHHHHHHHHcCCCCCccCchhh-
Confidence 9999999875321 0000 0000 0011356688899999888888876
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|+ ..++.++||+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~tH~-~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYISHK-MEEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecC-HHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 46777776654 458889999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhc
Q 000615 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 498 (1389)
+|+++..|+.+++.. .+ ..+.+
T Consensus 209 ~G~i~~~~~~~~~~~---------------~~-----------------------------~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM---------------DK-----------------------------IIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH---------------HH-----------------------------HHHHH--------------
Confidence 999998877643200 00 00000
Q ss_pred CCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHH
Q 000615 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1389)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1389)
....
T Consensus 231 --------------------------------------------------------------~~~~-------------- 234 (491)
T PRK10982 231 --------------------------------------------------------------VGRS-------------- 234 (491)
T ss_pred --------------------------------------------------------------hCCC--------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 000615 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1389)
Q Consensus 579 ~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~ 658 (1389)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000615 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1389)
Q Consensus 659 ~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 738 (1389)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccC
Q 000615 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1389)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1389)
.. . +
T Consensus 236 -------~~---~------------~------------------------------------------------------ 239 (491)
T PRK10982 236 -------TQ---R------------F------------------------------------------------------ 239 (491)
T ss_pred -------cc---c------------c------------------------------------------------------
Confidence 00 0 0
Q ss_pred cccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEE
Q 000615 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1389)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1389)
+.. . .. + .+..++++|+++. .+.+|+|||+.+++||++||
T Consensus 240 ----------~~~---~------~~-----~-~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l 279 (491)
T PRK10982 240 ----------PDK---E------NK-----P-GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGI 279 (491)
T ss_pred ----------ccc---c------CC-----C-CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEE
Confidence 000 0 00 0 0113677777653 12489999999999999999
Q ss_pred eccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCC---CCCCCCCHHHHHHHHHH--hhc
Q 000615 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAW--LRL 969 (1389)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~--lr~ 969 (1389)
+||||||||||+++|+|...+ .+|+|.++|.++.. ...++.++|++|++ .+++.+|+.++..+... ...
T Consensus 280 ~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (491)
T PRK10982 280 AGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKN 357 (491)
T ss_pred ecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcc
Confidence 999999999999999997653 47999999976532 12345689999985 36788888877433210 100
Q ss_pred CCC-CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHH
Q 000615 970 SSD-VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR 1047 (1389)
Q Consensus 970 ~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~ 1047 (1389)
... ......++.+.++++.+++. +..+.. +..|||||||||+||++|+.+|+||||||||+|||+.++..+++
T Consensus 358 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~ 432 (491)
T PRK10982 358 KVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQ 432 (491)
T ss_pred cccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHH
Confidence 001 11223345678899999985 445655 45799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1048 TVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1048 ~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
.|+++.++|+|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 433 ~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 433 LIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred HHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 99999888999999999986 57789999999985 788876654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.7e-60 Score=589.73 Aligned_cols=447 Identities=19% Similarity=0.281 Sum_probs=328.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCC--C-
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLH--H- 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~--~- 257 (1389)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 16 ~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (490)
T PRK10938 16 TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLS 92 (490)
T ss_pred eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhcc
Confidence 35999999999999999999999999999999999999887 8999999977643221 2458999998542 1
Q ss_pred -----CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccc
Q 000615 258 -----GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD 332 (1389)
Q Consensus 258 -----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~d 332 (1389)
..+||+|++.+.. +....++.+++.+||++..|
T Consensus 93 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~ 130 (490)
T PRK10938 93 PGEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLD 130 (490)
T ss_pred cchhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhh
Confidence 1467777764310 00113456788999998888
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++.|+ ..++.++||
T Consensus 131 ~~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tvii~tH~-~~~~~~~~d 203 (490)
T PRK10938 131 RRFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS-GITLVLVLNR-FDEIPDFVQ 203 (490)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc-CCeEEEEeCC-HHHHHhhCC
Confidence 88887 9999999999999999999999999999999999999999999998764 6777776655 457889999
Q ss_pred eEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchh
Q 000615 413 DIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQ 492 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 492 (1389)
+|++|++|+++.+|+++++.+. +.+.....
T Consensus 204 ~v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~~~----------------------------------- 233 (490)
T PRK10938 204 FAGVLADCTLAETGEREEILQQ---------------ALVAQLAH----------------------------------- 233 (490)
T ss_pred EEEEEECCEEEEeCCHHHHhcc---------------hhhhhhhh-----------------------------------
Confidence 9999999999999887654210 00000000
Q ss_pred HHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCC
Q 000615 493 IASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNG 572 (1389)
Q Consensus 493 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~ 572 (1389)
.+ ....
T Consensus 234 ------------------------------------~~--------------------------------------~~~~ 239 (490)
T PRK10938 234 ------------------------------------SE--------------------------------------QLEG 239 (490)
T ss_pred ------------------------------------hh--------------------------------------ccCc
Confidence 00 0000
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchH
Q 000615 573 GSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1389)
Q Consensus 573 ~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1389)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHH
Q 000615 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1389)
Q Consensus 653 ~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 732 (1389)
.
T Consensus 240 ---------------------------------------------------------~---------------------- 240 (490)
T PRK10938 240 ---------------------------------------------------------V---------------------- 240 (490)
T ss_pred ---------------------------------------------------------c----------------------
Confidence 0
Q ss_pred HHhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccch
Q 000615 733 NEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGE 812 (1389)
Q Consensus 733 nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~ 812 (1389)
. .+.. .
T Consensus 241 --------~--~~~~---~------------------------------------------------------------- 246 (490)
T PRK10938 241 --------Q--LPEP---D------------------------------------------------------------- 246 (490)
T ss_pred --------c--cCcc---c-------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred hhhccCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeC
Q 000615 813 KQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRP 892 (1389)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 892 (1389)
. ...+ . . . . .....++++|+++.++ ++.+|+|+||++++
T Consensus 247 ---------~---~~~~-~---~--~---~-------~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~ 285 (490)
T PRK10938 247 ---------E---PSAR-H---A--L---P-------ANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNP 285 (490)
T ss_pred ---------c---cccc-c---c--c---C-------CCCceEEEeceEEEEC-------------CeeEEeeceEEEcC
Confidence 0 0000 0 0 0 0 0011367778776542 24599999999999
Q ss_pred CeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCCCCCC--CCCHHHHHHHHHH
Q 000615 893 GVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHSP--YVTVYESLLYSAW 966 (1389)
Q Consensus 893 Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTv~E~l~f~~~ 966 (1389)
||++||+||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+++ ..|++|++.+...
T Consensus 286 Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~ 364 (490)
T PRK10938 286 GEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFF 364 (490)
T ss_pred CCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccc
Confidence 999999999999999999999996431 137999999976421 124567999999876544 3577776654321
Q ss_pred h--hcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000615 967 L--RLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1389)
Q Consensus 967 l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1389)
- ....... .+.++.++++++.++|.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++.
T Consensus 365 ~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~ 438 (490)
T PRK10938 365 DSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQ 438 (490)
T ss_pred cccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHH
Confidence 0 1111111 223456889999999986 666653 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCC-CEEEEEecCccHHHHH-hhCeEEEEecCcEEEEe
Q 000615 1044 IVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1044 ~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~d~~l~l~~gG~~~~~ 1089 (1389)
.+++.|++++++| .|||++||+++ ++.+ .+|++++|.+ |++++.
T Consensus 439 ~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 439 LVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999999998776 47999999976 4555 4799999975 666554
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=5.6e-58 Score=508.55 Aligned_cols=470 Identities=24% Similarity=0.346 Sum_probs=356.2
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC--CCCceeEEEECCeeCCCCCcC-------ceEEEecC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK--DLRASGKITYCGHELNEFVPQ-------RTCAYISQ 252 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 252 (1389)
....++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999976 345689999999987544321 47999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccc
Q 000615 253 HD--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC 330 (1389)
Q Consensus 253 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~ 330 (1389)
+| .+.|-.|+...+.-..++.. .+++ ...+.++-+.|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hr---------g~~~------------------------~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHR---------GLSR------------------------AAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHh---------cccH------------------------HHHHHHHHHHHHHcCCCch
Confidence 97 45566677777755443321 1111 1123345667888899865
Q ss_pred ccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhh
Q 000615 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1389)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 410 (1389)
.... +++...|||||||||.||.||+.+|++|+-||||++||...+.+|.+.|+++.+..|..+++ ++|...-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lf-ITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILF-ITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEE-EeccHHHHHHh
Confidence 4333 24556799999999999999999999999999999999999999999999999887766555 55666678899
Q ss_pred cCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccc
Q 000615 411 FDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMG 490 (1389)
Q Consensus 411 ~D~iilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 490 (1389)
+|+|+||.+|+++++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999999877632 1111 000
Q ss_pred hhHHhhhcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCC
Q 000615 491 QQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDM 570 (1389)
Q Consensus 491 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~ 570 (1389)
|.++.
T Consensus 255 ---------------------------------------r~Ll~------------------------------------ 259 (534)
T COG4172 255 ---------------------------------------RKLLA------------------------------------ 259 (534)
T ss_pred ---------------------------------------HHHHh------------------------------------
Confidence 00000
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcc
Q 000615 571 NGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDP 650 (1389)
Q Consensus 571 ~~~~~~~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 650 (1389)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHH
Q 000615 651 AASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSL 730 (1389)
Q Consensus 651 ~~~~ff~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 730 (1389)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeecc
Q 000615 731 LVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEED 810 (1389)
Q Consensus 731 ~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~ 810 (1389)
. .+. |.
T Consensus 260 --a----------eP~--------g~------------------------------------------------------ 265 (534)
T COG4172 260 --A----------EPS--------GD------------------------------------------------------ 265 (534)
T ss_pred --c----------CCC--------CC------------------------------------------------------
Confidence 0 000 00
Q ss_pred chhhhccCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEE
Q 000615 811 GEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVF 890 (1389)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 890 (1389)
..+ ..+..+.-++.+|++..++.+...-. -..+...++++||++.
T Consensus 266 ----------------~~p-----------------~~~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~AVd~isl~L 310 (534)
T COG4172 266 ----------------PPP-----------------LPEDAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRAVDGISLTL 310 (534)
T ss_pred ----------------CCC-----------------CCCCCCceEEecceEEEEecCCcccc--ccchheEEeccceeEe
Confidence 000 00001112333333333322211100 0122357999999999
Q ss_pred eCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCC--CCCCCCHHHHHH
Q 000615 891 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDI--HSPYVTVYESLL 962 (1389)
Q Consensus 891 ~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~~~~lTv~E~l~ 962 (1389)
++||.+||+|.||||||||=.+|.+...+ +|+|.++|.++.. ..+|+.+-.|+|||. +.|.+||.|-+.
T Consensus 311 ~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~ 387 (534)
T COG4172 311 RRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIE 387 (534)
T ss_pred cCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhh
Confidence 99999999999999999999999987653 5999999988653 346678999999985 789999999988
Q ss_pred HHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHH
Q 000615 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1041 (1389)
Q Consensus 963 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~ 1041 (1389)
-+.....+ ..+..++++++.++|+.+||.+- .++. +..+|||||||++|||||+.+|++++||||||+||-.-
T Consensus 388 EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SV 461 (534)
T COG4172 388 EGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSV 461 (534)
T ss_pred hhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHH
Confidence 77666543 45678899999999999999763 3333 46899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1042 AAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1042 ~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+.+|.++|+++.+ .|.+-++++||+. -+-.+||++++|. +|++++.||.
T Consensus 462 QaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~-~GkiVE~G~~ 511 (534)
T COG4172 462 QAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMR-DGKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEe-CCEEeeeCCH
Confidence 9999999999965 4899999999986 4777899999997 5899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-57 Score=569.99 Aligned_cols=201 Identities=22% Similarity=0.309 Sum_probs=162.0
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+ +++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSF-------------GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEE-------------CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 47788887654 23469999999999999999999999999999999999765 3479998854 1
Q ss_pred ChhhhhheeeEeccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000615 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 1011 (1389)
..+||++|++ .+++.+||.|++.+....... ... ...+.++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999996 678889999999876432211 111 123457899999964 45555 34799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-Eec
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAG 1090 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~-~~g 1090 (1389)
||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. | |||++||+++ .+...||++++|.++|++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999976 5777899999998667765 455
Q ss_pred C
Q 000615 1091 P 1091 (1389)
Q Consensus 1091 ~ 1091 (1389)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.2e-57 Score=572.12 Aligned_cols=201 Identities=21% Similarity=0.293 Sum_probs=161.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+ +++.+|+|||++|++|+++||+||||||||||+++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGF-------------GDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEE-------------CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 36788877644 23469999999999999999999999999999999999765 34799988542
Q ss_pred ChhhhhheeeEeccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000615 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 1011 (1389)
..+||++|++ .+++.+||.|++.+...... .... ...+.++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 47788999999987642211 1111 123557899999964 45555 34799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-Eec
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAG 1090 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~-~~g 1090 (1389)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++||+++ .+...||++++|+++|++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999976 5777899999998666765 445
Q ss_pred C
Q 000615 1091 P 1091 (1389)
Q Consensus 1091 ~ 1091 (1389)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 37
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-57 Score=568.63 Aligned_cols=198 Identities=19% Similarity=0.286 Sum_probs=162.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 478888876542 24699999999999999999999999999999999997653 4799999873
Q ss_pred ChhhhhheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000615 934 NQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgG 1010 (1389)
+.+||++|++. +.+.+||+|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 456799999986421 11 1 1124578899999994 556665 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-Ee
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~-~~ 1089 (1389)
|||||+||++|+.+|+||+|||||+|||+.+...+.+.|+++ +.|||++||+++ .+...||++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 57778999999985 6766 77
Q ss_pred cCC
Q 000615 1090 GPL 1092 (1389)
Q Consensus 1090 g~~ 1092 (1389)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=6.5e-56 Score=553.64 Aligned_cols=211 Identities=21% Similarity=0.251 Sum_probs=170.1
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|...+ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 367777765431 2 258999999999999999999999999999999997653 47888875
Q ss_pred ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000615 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1389)
..++|++|+..+.+.+||+|++.+.... .. . ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~---~~--~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD---LG--S---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh---cC--h---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888899999999874211 11 1 124688999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|. |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999976 5677899999995 466666664
Q ss_pred Ccc---hhHHHHHHHhC
Q 000615 1093 GHE---SHKLIEYFEAV 1106 (1389)
Q Consensus 1093 ~~~---~~~~~~~f~~~ 1106 (1389)
... .+.+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 23345566665
No 39
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-54 Score=511.24 Aligned_cols=451 Identities=24% Similarity=0.367 Sum_probs=350.4
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC----ceEEEecCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLHH 257 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 257 (1389)
...++|+|||+.+++||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....++ ..|+.|.|+..+.
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 5678999999999999999999999999999999999999998 99999999998765553 5699999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
|+|||.|||.++....... ... .+ ......+..+|+.+|+....++.|++
T Consensus 96 p~LsVaeNifLgre~~~~~---g~i---d~------------------------~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 96 PNLSVAENIFLGREPTRRF---GLI---DR------------------------KAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CCccHHHHhhcccccccCC---Ccc---CH------------------------HHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 9999999998765432210 000 00 01123456789999997669999998
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
||+||||-|.||||+..++++++|||||++|+...+..+.+.++++.. .|.++ +.+.|..+|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~-~Gv~i-i~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA-QGVAI-IYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCCEE-EEEcCcHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999999986 35554 45566889999999999999
Q ss_pred cCCeEEEecCh-hHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhh
Q 000615 418 SEGQIVYQGPR-DNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASD 496 (1389)
Q Consensus 418 ~~G~iv~~G~~-~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 496 (1389)
.+|+.+..++. .+.-. ++..
T Consensus 219 RDG~~v~~~~~~~~~~~--------------------------------------------~~lv--------------- 239 (500)
T COG1129 219 RDGRVVGTRPTAAETSE--------------------------------------------DELV--------------- 239 (500)
T ss_pred eCCEEeeecccccCCCH--------------------------------------------HHHH---------------
Confidence 99999876652 22100 0000
Q ss_pred hcCCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchh
Q 000615 497 LRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRY 576 (1389)
Q Consensus 497 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~ 576 (1389)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHH
Q 000615 577 FGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFF 656 (1389)
Q Consensus 577 ~g~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff 656 (1389)
-.|+|=
T Consensus 240 ------------------------------------------------------------------~~MvGr-------- 245 (500)
T COG1129 240 ------------------------------------------------------------------RLMVGR-------- 245 (500)
T ss_pred ------------------------------------------------------------------HHhhCc--------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhc
Q 000615 657 KQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFL 736 (1389)
Q Consensus 657 ~~~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 736 (1389)
+.
T Consensus 246 -----------------------------------------------------------------------------~~- 247 (500)
T COG1129 246 -----------------------------------------------------------------------------EL- 247 (500)
T ss_pred -----------------------------------------------------------------------------ch-
Confidence 00
Q ss_pred CCccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhc
Q 000615 737 GGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRA 816 (1389)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 816 (1389)
...|.
T Consensus 248 ~~~~~--------------------------------------------------------------------------- 252 (500)
T COG1129 248 EDLFP--------------------------------------------------------------------------- 252 (500)
T ss_pred hhhcc---------------------------------------------------------------------------
Confidence 00000
Q ss_pred cCcccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEE
Q 000615 817 SGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLT 896 (1389)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 896 (1389)
. . ... ...+..++++|++. ...++||||++++||++
T Consensus 253 ------------------~--~-~~~------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIl 288 (500)
T COG1129 253 ------------------E--P-PEE------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEIL 288 (500)
T ss_pred ------------------c--c-ccc------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEE
Confidence 0 0 000 00112345555542 12578999999999999
Q ss_pred EEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccC---CCCCCCCCHHHHHHHHHHhhc
Q 000615 897 ALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQN---DIHSPYVTVYESLLYSAWLRL 969 (1389)
Q Consensus 897 al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~E~l~f~~~lr~ 969 (1389)
||-|-=|||+|-|+++|.|... ...|+|.+||.+... +..+..++|||.| +-+++.++|.||+.++...+.
T Consensus 289 GiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~ 366 (500)
T COG1129 289 GIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRF 366 (500)
T ss_pred EEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhh
Confidence 9999999999999999999543 347999999997542 3456679999976 457889999999988733222
Q ss_pred C-C-CCcHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHH
Q 000615 970 S-S-DVDTKKRKMFVDEVMELVELKSLN-DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1046 (1389)
Q Consensus 970 ~-~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1046 (1389)
. . -.+....++.+++..+.++++... +.. +..||||++|||.|||.|..+|+||+|||||.|+|.-+..+|.
T Consensus 367 ~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy 441 (500)
T COG1129 367 SRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIY 441 (500)
T ss_pred ccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHH
Confidence 1 1 244555667789999999986432 233 4589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1047 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1047 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
++|++++++|++||++|-+.. |+...|||+++|. +|+++..=+
T Consensus 442 ~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~-~Gri~~e~~ 484 (500)
T COG1129 442 RLIRELAAEGKAILMISSELP-ELLGLSDRILVMR-EGRIVGELD 484 (500)
T ss_pred HHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEE-CCEEEEEec
Confidence 999999999999999999975 8999999999998 588876433
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.4e-54 Score=549.40 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=160.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.+.++|+++.+ +++.+|+|||++|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQI-------------DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEE-------------CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 46788887654 23469999999999999999999999999999999999754 34789988 4321
Q ss_pred ChhhhhheeeEeccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000615 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGq 1011 (1389)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..+..+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5788999999998753210 111 1123477889999885 3455553 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe-cCcEEEEec
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-RGGRVIYAG 1090 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~-~gG~~~~~g 1090 (1389)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++||+.. .+...||+++++. +|....|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999976 5777899999997 444445566
Q ss_pred CC
Q 000615 1091 PL 1092 (1389)
Q Consensus 1091 ~~ 1092 (1389)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 41
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-54 Score=545.47 Aligned_cols=197 Identities=22% Similarity=0.334 Sum_probs=158.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.+.++|+++.+ +++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y-------------~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGY-------------GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEe-------------CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 47788887654 23569999999999999999999999999999999999765 34789988641
Q ss_pred ChhhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000615 934 NQETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgG 1010 (1389)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.. ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 112345788999999963 556654 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-Ee
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~-~~ 1089 (1389)
|||||+||++|+.+|+||||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...||++++|.+ |+++ +.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999976 57778999999985 7776 77
Q ss_pred cCC
Q 000615 1090 GPL 1092 (1389)
Q Consensus 1090 g~~ 1092 (1389)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.6e-51 Score=520.47 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=155.8
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 478888876542 123599999999999999999999999999999999997653 4789988652
Q ss_pred ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000615 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqr 1012 (1389)
..+||++|+.. +.+++.++..+......+ ... .+.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999753 445666664332111111 111 234788999999973 44554 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-EecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~-~~g~ 1091 (1389)
|||+||++|+.+|++|||||||+|||+.+...+.+.|++. +.|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 349999999976 57778999999985 7777 6675
Q ss_pred C
Q 000615 1092 L 1092 (1389)
Q Consensus 1092 ~ 1092 (1389)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.1e-51 Score=496.43 Aligned_cols=225 Identities=27% Similarity=0.298 Sum_probs=174.8
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1389)
..+++|+|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+ .-.++|++|++...+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCcc
Confidence 4567999999999999999999999999999999999999987 99998754 237999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHH-HHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFM-KAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|.+.+.-+.. ..+++..++........-......+... ......++..+..++.++..||+++. ++.+++
T Consensus 83 v~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~--- 153 (530)
T COG0488 83 VLDYVIEGFG-----ELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS--- 153 (530)
T ss_pred HHHHHHhhhH-----HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh---
Confidence 9999976533 2222332222221110000001111111 12224456777889999999999988 899988
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
||||||.||++|++|+.+|++|+|||||++||..+..++.+.|++. .+ |+| .+.|.....-+.|++|+-++.|
T Consensus 154 --LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-tvi-iVSHDR~FLd~V~t~I~~ld~g 226 (530)
T COG0488 154 --LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-TVI-VVSHDRYFLDNVATHILELDRG 226 (530)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-cEE-EEeCCHHHHHHHhhheEEecCC
Confidence 9999999999999999999999999999999999999999999864 24 444 4567787888999999999999
Q ss_pred eE-EEecChhHHHH
Q 000615 421 QI-VYQGPRDNVLE 433 (1389)
Q Consensus 421 ~i-v~~G~~~~~~~ 433 (1389)
++ .|.|+++...+
T Consensus 227 ~l~~y~Gny~~~~~ 240 (530)
T COG0488 227 KLTPYKGNYSSYLE 240 (530)
T ss_pred ceeEecCCHHHHHH
Confidence 76 57788876654
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.8e-50 Score=465.15 Aligned_cols=457 Identities=23% Similarity=0.315 Sum_probs=354.2
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC----ceEEEecCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLHHG 258 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 258 (1389)
...+++|||++|++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ ..||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 678999999999999999999999999999999999999998 99999999998766553 46999999999999
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
++||.||+..+..-...+ + +.+ ......++.+.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~~-~------~~~------------------------~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKGG-L------IDR------------------------RQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccccc-c------cCH------------------------HHHHHHHHHHHHHhCCCCCccceeec-
Confidence 999999999875432100 0 000 01123467788999999999999999
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
||=||||||.|-++|+.+|++|+|||||+-|-|....++.+.|+++++ .|+|+|+ ++|-..|+.+.||++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~G~tIi~-ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-EGKTIIF-ITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEE-EeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999987 4666655 4567789999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcCccchhhhhhccCCCCCCCChhHHHHHHHhCccchhHHhhhc
Q 000615 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 498 (1389)
.|+++-.-++ .. + .+.+++++.
T Consensus 215 ~Gkvvgt~~~--~~--------------~---------------------------~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--VA--------------E---------------------------TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--CC--------------C---------------------------CCHHHHHHH---------------
Confidence 9998643221 00 0 000000000
Q ss_pred CCCCcccCCCCccccCcccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcchhHH
Q 000615 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1389)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1389)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 000615 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1389)
Q Consensus 579 ~lff~ll~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~ 658 (1389)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000615 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1389)
Q Consensus 659 ~l~~~~~~~~~~~l~~~iaa~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 738 (1389)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCcccccccccccccCccccCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeccchhhhccC
Q 000615 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1389)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1389)
..+.
T Consensus 240 -----------------~~v~----------------------------------------------------------- 243 (501)
T COG3845 240 -----------------REVV----------------------------------------------------------- 243 (501)
T ss_pred -----------------Cccc-----------------------------------------------------------
Confidence 0000
Q ss_pred cccchhhhhhcccccccccccccccCccccccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEE
Q 000615 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1389)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1389)
..... . .... .+..++++|++...+ .....+++|||++++||++||
T Consensus 244 -------~~~~~-------~--~~~p------g~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGI 289 (501)
T COG3845 244 -------LRVVK-------P--PSTP------GEVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGI 289 (501)
T ss_pred -------ccccc-------C--CCCC------CCeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEE
Confidence 00000 0 0000 022456666653221 124589999999999999999
Q ss_pred eccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC----Chhh-hhheeeEeccCCC---CCCCCCHHHHHHHHHHhhc-
Q 000615 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK----NQET-FARVSGYCEQNDI---HSPYVTVYESLLYSAWLRL- 969 (1389)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~----~~~~-~~~~~gyv~Q~~~---~~~~lTv~E~l~f~~~lr~- 969 (1389)
.|..|-|-+.|+.+|+|..+. .+|+|.++|.+. +... .+..++|||.|.. +.+.+|+.||+.+...-+.
T Consensus 290 AGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~ 367 (501)
T COG3845 290 AGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKP 367 (501)
T ss_pred EecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccc
Confidence 999999999999999997542 249999999985 2222 2346899998763 5688999999987653211
Q ss_pred ---CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHH
Q 000615 970 ---SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1046 (1389)
Q Consensus 970 ---~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1046 (1389)
..-.......+...++++.++.....-. ...+.||||++||+-+||+|.++|++|+..+||-|||..+.+.|.
T Consensus 368 ~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~ 443 (501)
T COG3845 368 FSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIH 443 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHH
Confidence 1124456677888999999988632221 124689999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1047 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1047 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+.|.+.++.|+.|++++-+++ |+++.+|++.+|. +|+++...+..
T Consensus 444 ~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~-~Gri~~~~~~~ 488 (501)
T COG3845 444 ERLLELRDAGKAVLLISEDLD-EILELSDRIAVIY-EGRIVGIVPPE 488 (501)
T ss_pred HHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeee-CCceecccccc
Confidence 999999999999999999998 8999999999998 48998777664
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=373.21 Aligned_cols=206 Identities=25% Similarity=0.370 Sum_probs=183.0
Q ss_pred ccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC----hhhhhheeeEeccCCCC
Q 000615 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN----QETFARVSGYCEQNDIH 951 (1389)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~~ 951 (1389)
.++..++|+|||++|++||+++|+|||||||||||++|.|... +.+|+|.++|.+.. ...+|+.+|+|+|+..+
T Consensus 11 ~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnL 88 (240)
T COG1126 11 SFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNL 88 (240)
T ss_pred EeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeecccccc
Confidence 3456789999999999999999999999999999999999866 34899999996542 34578899999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 952 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
||++||.||+.++-..- ...++++.++...++|+.+||.+.+|.. +..|||||||||+|||||+.+|+++++|
T Consensus 89 FPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGGQqQRVAIARALaM~P~vmLFD 161 (240)
T COG1126 89 FPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMDPKVMLFD 161 (240)
T ss_pred cccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcHHHHHHHHHHHHcCCCCEEeec
Confidence 99999999999875432 2345677778899999999999999988 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||||+|||+...++.+.+++++++|.|.||+||+... ..+.+||++.|+ +|+++..|++
T Consensus 162 EPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 162 EPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 9999999999999999999999999999999999764 667889999998 5889988875
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=367.07 Aligned_cols=222 Identities=26% Similarity=0.407 Sum_probs=187.4
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC----CcCceEEEecCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF----VPQRTCAYISQHDLHH 257 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~d~~~ 257 (1389)
...++|+|||++|++||+++|+|||||||||||++|.|+.+++ +|+|.++|.++... ..++.+|+|+|+..+|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 3567999999999999999999999999999999999999888 99999999866422 2367899999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
|++||.||+..+...- ..+++ .+++..+...|+.+||.+.+|...+.
T Consensus 90 PHlTvleNv~lap~~v---------~~~~k------------------------~eA~~~A~~lL~~VGL~~ka~~yP~q 136 (240)
T COG1126 90 PHLTVLENVTLAPVKV---------KKLSK------------------------AEAREKALELLEKVGLADKADAYPAQ 136 (240)
T ss_pred ccchHHHHHHhhhHHH---------cCCCH------------------------HHHHHHHHHHHHHcCchhhhhhCccc
Confidence 9999999998864310 00111 12233456789999999999998876
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. |.|+++.+| ....+.+.+|||+.|
T Consensus 137 -----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e-GmTMivVTH-EM~FAr~VadrviFm 209 (240)
T COG1126 137 -----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE-GMTMIIVTH-EMGFAREVADRVIFM 209 (240)
T ss_pred -----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc-CCeEEEEec-hhHHHHHhhheEEEe
Confidence 9999999999999999999999999999999999999999999999984 678887765 456888999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHh
Q 000615 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQE 454 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~ 454 (1389)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 345666666667654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.6e-42 Score=397.78 Aligned_cols=202 Identities=20% Similarity=0.216 Sum_probs=153.6
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..+.+.|+++.++. +..++++++|-|.+++.+|++|||||||||||+++.|...+ ..|.+.-.-+
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H- 452 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSH- 452 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--cccccccccc-
Confidence 35678888775431 22689999999999999999999999999999999997653 4566543221
Q ss_pred CChhhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 933 KNQETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 933 ~~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
-++++..|+. .+.-..++-|+++=.. .+ +.+.+.+..++..+||..-.+.. ..+.||+|
T Consensus 453 -------~~~~~y~Qh~~e~ldl~~s~le~~~~~~-----~~---~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~G 513 (614)
T KOG0927|consen 453 -------NKLPRYNQHLAEQLDLDKSSLEFMMPKF-----PD---EKELEEMRSILGRFGLTGDAQVV----PMSQLSDG 513 (614)
T ss_pred -------ccchhhhhhhHhhcCcchhHHHHHHHhc-----cc---cchHHHHHHHHHHhCCCcccccc----chhhcccc
Confidence 1234444432 2223456666653211 11 23445688999999998443332 15689999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||+||..|+.++..|.||+|||||+|||..+...+.++|.+. ..+||+++||.. -+-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999876 468999999976 4778889999999888888888
Q ss_pred CC
Q 000615 1091 PL 1092 (1389)
Q Consensus 1091 ~~ 1092 (1389)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 75
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-41 Score=389.08 Aligned_cols=202 Identities=32% Similarity=0.473 Sum_probs=182.0
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 47899999999999999999999999999999999998764 58999999987654 467788999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1389)
|+|+|.|.+.++.+.. +..+++++++++.++|.+..+.. +++||+||||||+||+||+++|+||||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999999986543 44556799999999999855554 458999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1037 LDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||.++..+.+.|++++++| +||+++||+++ ++...||++++|. +|++++.|+.
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~-~G~~~~~g~~ 221 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILN-DGKIIAEGTP 221 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEe-CCEEEEeCCH
Confidence 99999999999999999887 89999999987 7888899999998 5899999975
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=370.16 Aligned_cols=203 Identities=27% Similarity=0.353 Sum_probs=182.8
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHS 952 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 952 (1389)
...+|+|||++|++||++||+|.||||||||++++.+... +.+|+|.++|.++.. ..+|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4579999999999999999999999999999999999766 358999999976432 45678899999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1389)
...||+||+.|...+.. .++++++++|.++++.+||.+.++.. +.+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999887763 56788899999999999999988887 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
|||+|||++...|.++|+++.++ |.||+++||+++ -+.+.||++.+|. .|++++.|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~-~G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLD-QGRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEee-CCEEEEeccHH
Confidence 99999999999999999999654 999999999976 3677899999998 58999999864
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-41 Score=356.97 Aligned_cols=231 Identities=26% Similarity=0.368 Sum_probs=197.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.+++++++.. .+.+.||+|||++|++||+++||||||+||||||++|.|..++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~-------------fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKS-------------FGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeee-------------cCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 4677776643 4567899999999999999999999999999999999998764 489999999875
Q ss_pred Ch------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000615 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSG 1006 (1389)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~ 1006 (1389)
.+ ...++++|+++|+-.+|..+||+||+.|.. |.....+++..++.+..-|+.+||... .+.. ++.
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 32 246678999999999999999999999864 444556777888888899999999877 5555 568
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
||||||||++||||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 899999999987 69999999999985 89
Q ss_pred EEEecCCCcc----hhHHHHHHHhCCC
Q 000615 1086 VIYAGPLGHE----SHKLIEYFEAVPG 1108 (1389)
Q Consensus 1086 ~~~~g~~~~~----~~~~~~~f~~~~~ 1108 (1389)
++..|++++. ...+.+||....+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 9999997542 2236677776543
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=366.23 Aligned_cols=217 Identities=29% Similarity=0.443 Sum_probs=184.0
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ...+|+|||+++++|++++|+||||||||||+|+|.|... +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~-------------~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG-------------NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC-------------CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 478888887653 2259999999999999999999999999999999999665 3589999999876
Q ss_pred ChhhhhheeeEeccCCCC--CCCCCHHHHHHHHHHhhcC--CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQETFARVSGYCEQNDIH--SPYVTVYESLLYSAWLRLS--SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~f~~~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
....-+..+|||||...+ ...+||+|-+..+..-+.+ .... ++.++.++++|+.+|+.+++|+.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 554435679999996532 2347999999886433321 1122 3336779999999999999999976 6999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||+|||.|||||+.+|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 5889999999996 589999
Q ss_pred cCCCc
Q 000615 1090 GPLGH 1094 (1389)
Q Consensus 1090 g~~~~ 1094 (1389)
|++.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99854
No 52
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-41 Score=384.71 Aligned_cols=217 Identities=29% Similarity=0.407 Sum_probs=193.6
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC-ceEEEecCCCCCCCCCCHHH
Q 000615 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ-RTCAYISQHDLHHGEMTVRE 264 (1389)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 264 (1389)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998774 89999999999999999999
Q ss_pred HHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCC
Q 000615 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1389)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLS 344 (1389)
|+.|+.+.++... .+.+.+++++.+.|+|++..|+.... ||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~P~~-----LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRKPLQ-----LS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 9999988765321 11234577889999999999998866 99
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000615 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1389)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~ 424 (1389)
|||||||++||||+.+|++++||||+|.||+..+.++...++++.+..+.|+|..+ |...|+..++|+|++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVT-HDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVT-HDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEc-CCHHHHHhhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999999999999887777777665 45669999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChHHHHH
Q 000615 425 QGPRDNVLEFFEHMGFKCPERKGVADFLQ 453 (1389)
Q Consensus 425 ~G~~~~~~~~F~~lG~~~p~~~~~adfl~ 453 (1389)
.|++.|+. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4577777777753
No 53
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-41 Score=361.37 Aligned_cols=192 Identities=26% Similarity=0.404 Sum_probs=172.3
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHH
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
...+|+|||++|++||+++|+||||||||||||+|+|..++ .+|+|.++|.+.. .....+|||+|++.++|.+||+
T Consensus 15 ~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 15 GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 36799999999999999999999999999999999998763 4899999998863 2345689999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.|+...+. .+.+++.+++++.|+.+||.++.|.. +..|||||||||+|||||+.+|+||+||||+++||
T Consensus 91 ~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALD 162 (248)
T COG1116 91 DNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQRVAIARALATRPKLLLLDEPFGALD 162 (248)
T ss_pred hhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhh
Confidence 99999877653 34556667899999999999999987 56899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1039 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
+.++..+++.+.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 163 alTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 163 ALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 9999999999999864 4899999999987 788899999999863
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=355.68 Aligned_cols=205 Identities=25% Similarity=0.357 Sum_probs=183.3
Q ss_pred cccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhhheeeEeccCCCCCC
Q 000615 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~ 953 (1389)
++++.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|.+||.++.. ..+||.+|||-|+-.+||
T Consensus 11 y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFP 88 (309)
T COG1125 11 YGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFP 88 (309)
T ss_pred cCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcccCC
Confidence 345789999999999999999999999999999999999776 358999999998653 568899999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS--LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
++||.||+.+--.+. .-++++.+++++|+|+++||.+ +.++. +..|||||+|||.+||||+++|+||+||
T Consensus 89 h~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilLMD 160 (309)
T COG1125 89 HLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILLMD 160 (309)
T ss_pred CccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEeec
Confidence 999999998766553 3456788889999999999975 67776 5689999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
||+++|||-++..+++.++++.++ |+|||++|||.+ |.+.+.|++.+|+ +|+++-.+++.
T Consensus 161 EPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 161 EPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred CCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 999999999999999999999755 999999999987 7899999999998 58888877753
No 55
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.2e-41 Score=367.53 Aligned_cols=218 Identities=30% Similarity=0.420 Sum_probs=186.8
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++.+|+++.+ +++.+|+|+||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 3 L~~~~ls~~y-------------~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGY-------------GGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEE-------------CCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCchh
Confidence 5667776654 457899999999999999999999999999999999997653 4799999998764
Q ss_pred ---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCC-CcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 ---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSD-VDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
...+++.++||||.....+.+||+|-+.++..-+.... ...++..+.++++|+.+++.+++++.+ ..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 45678899999999988889999999998754322211 122333446999999999999999985 579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||+.|||||+.+|+||+||||||.||...+.+++++++++++ +|.|||+++||++ .....||++++|+ +|+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN-~A~ryad~~i~lk-~G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLN-LAARYADHLILLK-DGKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCeEEee
Confidence 99999999999999999999999999999999999999999984 5999999999998 4778999999998 5899999
Q ss_pred cCCCc
Q 000615 1090 GPLGH 1094 (1389)
Q Consensus 1090 g~~~~ 1094 (1389)
|++.+
T Consensus 221 G~p~e 225 (258)
T COG1120 221 GTPEE 225 (258)
T ss_pred cCcch
Confidence 98753
No 56
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-41 Score=364.69 Aligned_cols=225 Identities=27% Similarity=0.366 Sum_probs=195.6
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDL 255 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 255 (1389)
...++|+|||++|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|+++..... ++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 9999999998876542 478999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
++...||.||++|..+..+.+ + .+.+.++.+.|+.+||++.+|...
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------k------------------------~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------K------------------------AEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhccCc
Confidence 999999999999987665532 1 112345778999999999999988
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
.+ |||||||||+|||||+.+|+||+.|||||+|||.|+..|.+.|+++.+.+|.|+++..|+. .-+-+.||+|.
T Consensus 140 ~q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm-~Vvk~ic~rVa 213 (339)
T COG1135 140 AQ-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEM-EVVKRICDRVA 213 (339)
T ss_pred hh-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHhhhhe
Confidence 77 9999999999999999999999999999999999999999999999999998888877664 47778999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhhcC
Q 000615 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTS 457 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v~s 457 (1389)
||++|+++++|+..++ |..|.+.-..+|+.+...
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhcc
Confidence 9999999999999987 344666666666665543
No 57
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.5e-40 Score=382.19 Aligned_cols=212 Identities=32% Similarity=0.474 Sum_probs=185.6
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC--CcCceEEEecCCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 260 (1389)
.+.+|+|||++|++|++++|+||||||||||+|+|+|.+.|+ +|+|.++|++.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 578999999999999999999999999999999999999997 99999999988653 3357899999999999999
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+|||.|.+++.+.... .....++++++.+||++..++.+++
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~~~~--- 136 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANKKVRT--- 136 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCcchhh---
Confidence 999999999888764310 0122467899999999866666755
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
||+||||||+||.||+++|++|||||||+||||.++.++.+.|+++++..+.|++++.|++ .++..+||+|++|++|
T Consensus 137 --lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l-~e~~~~~d~v~il~~G 213 (293)
T COG1131 137 --LSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHIL-EEAEELCDRVIILNDG 213 (293)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcH-HHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999986546777776655 5899999999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 000615 421 QIVYQGPRDNVLEFFEH 437 (1389)
Q Consensus 421 ~iv~~G~~~~~~~~F~~ 437 (1389)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998765543
No 58
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-40 Score=398.94 Aligned_cols=213 Identities=24% Similarity=0.432 Sum_probs=184.0
Q ss_pred CCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCC
Q 000615 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL 255 (1389)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 255 (1389)
+.+++.+||||+|++|+|||.||||||||+||||+.++|..+|+|+ +|+|.+||+|+.+.++ ++.+|+|.|+|.
T Consensus 476 P~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPv 552 (716)
T KOG0058|consen 476 PTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPV 552 (716)
T ss_pred CCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccce
Confidence 4456778999999999999999999999999999999999999998 9999999999998875 588999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
+|. -||+|||.|+.. ..+.|+.+.++..++.+ +. +.++++.+||.|
T Consensus 553 LFs-~sI~eNI~YG~~-------------------------~~t~e~i~~AAk~ANah-----~F---I~~~p~gY~T~V 598 (716)
T KOG0058|consen 553 LFS-GSIRENIAYGLD-------------------------NATDEEIEAAAKMANAH-----EF---ITNFPDGYNTVV 598 (716)
T ss_pred eec-ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHhChH-----HH---HHhCcccccccc
Confidence 996 599999999743 22334455565555443 33 446999999999
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
|+ .+..||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ ++||++.-|. .++.+.+|+|+
T Consensus 599 GE-kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIAHR--LSTV~~Ad~Iv 673 (716)
T KOG0058|consen 599 GE-KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIAHR--LSTVRHADQIV 673 (716)
T ss_pred CC-ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEehh--hhHhhhccEEE
Confidence 97 3345999999999999999999999999999999999999999999998876 4777776553 47899999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000615 416 LLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1389)
|+++|++++.|+++|+++
T Consensus 674 vi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 674 VIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEcCCeEEecccHHHHhh
Confidence 999999999999999975
No 59
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-41 Score=382.97 Aligned_cols=223 Identities=29% Similarity=0.420 Sum_probs=197.6
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 261 (1389)
...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+..+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 567999999999999999999999999999999999999998 9999999999998876 588999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.|+.+.+... +++ +...+++++++.++|++.+++.+.+
T Consensus 94 V~~NVafGLk~~~~~-------------------~~~--------------~i~~rv~e~L~lV~L~~~~~R~p~q---- 136 (352)
T COG3842 94 VEENVAFGLKVRKKL-------------------KKA--------------EIKARVEEALELVGLEGFADRKPHQ---- 136 (352)
T ss_pred HHHHhhhhhhhcCCC-------------------CHH--------------HHHHHHHHHHHHcCchhhhhhChhh----
Confidence 999999997743211 001 1233578899999999999888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||++||||+.+|++|+||||.|+||..-+.++...|+++.+..|.|.|..+ |+..|.+.++|+|++|++|+
T Consensus 137 -LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VT-HDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 137 -LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVT-HDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred -hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEE-CCHHHHhhhccceEEccCCc
Confidence 9999999999999999999999999999999999999999999999988887777665 55679999999999999999
Q ss_pred EEEecChhHHHHHHHhcCCCCCCCCChHHHHHhh
Q 000615 422 IVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEV 455 (1389)
Q Consensus 422 iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v 455 (1389)
|...|+++|+ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4568888888888653
No 60
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-41 Score=342.32 Aligned_cols=201 Identities=30% Similarity=0.407 Sum_probs=183.6
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC--hhhhhheeeEeccCCCCCCCCCHH
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN--QETFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|.++|.+.. +...++.+|.++.+-.++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 499999999999999999999999999999999998764 4899999999853 356788999999888899999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
|||.|.+.+. +....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999999886 34556778889999999999999999976 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
..+.+.+.+.++++.+.|++||++||.++ |+...||+++++.+ |++++.|++.
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 99999999999999988999999999976 77779999999985 8999999864
No 61
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=349.34 Aligned_cols=208 Identities=27% Similarity=0.417 Sum_probs=184.9
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1389)
.+++++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+... ++.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999998 9999999999987654 6899999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc--cccccccC
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--CADTMVGD 337 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~--~~dt~vg~ 337 (1389)
+||.|||.+-..+.+... ++.+.+++++|+.+||+. ..|+..-+
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~~~~~RyP~e 135 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPSEYADRYPHE 135 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHHHHhhcCchh
Confidence 999999998665544221 112345788999999974 66776655
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++.+..++|+|+.. |...|.+.++|+|++|
T Consensus 136 -----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVT-HDidEA~kLadri~vm 209 (309)
T COG1125 136 -----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVT-HDIDEALKLADRIAVM 209 (309)
T ss_pred -----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEe-cCHHHHHhhhceEEEe
Confidence 9999999999999999999999999999999999999999999999988888877665 6678999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000615 418 SEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1389)
++|+++..+++++++.
T Consensus 210 ~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 210 DAGEIVQYDTPDEILA 225 (309)
T ss_pred cCCeEEEeCCHHHHHh
Confidence 9999999999999974
No 62
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.6e-40 Score=365.13 Aligned_cols=211 Identities=29% Similarity=0.439 Sum_probs=183.3
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC---ceEEEecCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGE 259 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 259 (1389)
+++||+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+...+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 457999999999999999999999999999999999999987 99999999999877653 789999999988889
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+|-+.++..-.... ... + ..++...++..|+.+|+.+.+++.+.+
T Consensus 91 ~tV~d~V~~GR~p~~~~-----~~~-----------~--------------~~~D~~~v~~aL~~~~~~~la~r~~~~-- 138 (258)
T COG1120 91 LTVYELVLLGRYPHLGL-----FGR-----------P--------------SKEDEEIVEEALELLGLEHLADRPVDE-- 138 (258)
T ss_pred cEEeehHhhcCCccccc-----ccC-----------C--------------CHhHHHHHHHHHHHhCcHHHhcCcccc--
Confidence 99999999874321000 000 0 001122467789999999999999988
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||.|||||+.+|+||+||||||+||...+.++++.++++++..+.|+|+++|.+ ....++||++++|++
T Consensus 139 ---LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDl-N~A~ryad~~i~lk~ 214 (258)
T COG1120 139 ---LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDL-NLAARYADHLILLKD 214 (258)
T ss_pred ---cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999987788888877655 588899999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 63
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=347.98 Aligned_cols=221 Identities=29% Similarity=0.380 Sum_probs=185.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++-.++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 467777764332 46789999999999999999999999999999999999655 4589999999754
Q ss_pred Ch------hhhhheeeEeccCCCCCCCCCHHHHHHHHHH-----hhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCC
Q 000615 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAW-----LRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP 1002 (1389)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~-----lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 1002 (1389)
.. ..+++.+||++|++.+.+.++|.||++.+.. ++.-.....++.+..+-++|+.+|+.+.+....
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 3467889999999999999999999987642 221123333455567889999999998888774
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+.|||||+|||+|||+|+.+|+||+-|||+++|||.+++.||+.|+++.+ .|.|||++.||.++ ..+.|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 47999999999999999999999999999999999999999999999975 48999999999874 667899999997
Q ss_pred cCcEEEEecCCCcc
Q 000615 1082 RGGRVIYAGPLGHE 1095 (1389)
Q Consensus 1082 ~gG~~~~~g~~~~~ 1095 (1389)
.|+++|+||..+.
T Consensus 223 -~G~ivfDg~~~el 235 (258)
T COG3638 223 -AGRIVFDGPASEL 235 (258)
T ss_pred -CCcEEEeCChhhh
Confidence 5899999998653
No 64
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-40 Score=358.46 Aligned_cols=206 Identities=30% Similarity=0.469 Sum_probs=186.1
Q ss_pred ccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCc---cCCh-hhhhheeeEeccCCCCCC
Q 000615 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY---PKNQ-ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~ 953 (1389)
+...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +.++ ..-.|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 346789999999999999999999999999999999998774 4899999998 5544 334578999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
+|||.+|+.|+...+ ...+++.+.+.+++++|+.++|+++.++. +..|||||||||++||||+..|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998777 34455677888999999999999999987 568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
.++||+.-+..+.+.|+++.++ |.|+|++|||+. +..+.+|++++|++ |+|+..||+.
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999876 999999999986 89999999999985 8999999864
No 65
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-40 Score=357.42 Aligned_cols=224 Identities=29% Similarity=0.470 Sum_probs=189.0
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCe---eCCCCCc-CceEEEecCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGH---ELNEFVP-QRTCAYISQHDLHH 257 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~d~~~ 257 (1389)
....+++|||+.|+.||+++++|||||||||||++|||+..|+ +|+|.+||. +.+.... .|.||||+|+..+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456899999999999999999999999999999999999998 999999999 5555333 48899999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
++|||.+||.|+.+++... |+ ..+.+.++++.|+.+.|++..|...-+
T Consensus 90 ~HmtVa~NIAFGl~~~~~~-------------------p~-------------~~~~r~rv~elL~lvqL~~la~ryP~Q 137 (345)
T COG1118 90 PHMTVADNIAFGLKVRKER-------------------PS-------------EAEIRARVEELLRLVQLEGLADRYPAQ 137 (345)
T ss_pred ccchHHhhhhhcccccccC-------------------CC-------------hhhHHHHHHHHHHHhcccchhhcCchh
Confidence 9999999999998765210 10 011233567789999999888887755
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||++||||+..|++|+||||+++||+..+.++.+.|+++.+..+.|+++.. |...|++++||+|++|
T Consensus 138 -----LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVT-HD~eea~~ladrvvvl 211 (345)
T COG1118 138 -----LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVT-HDQEEALELADRVVVL 211 (345)
T ss_pred -----cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEe-CCHHHHHhhcceEEEe
Confidence 9999999999999999999999999999999999999999999999887777777665 5567999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHh
Q 000615 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQE 454 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~ 454 (1389)
++|+|...||++|+.+ .|...-+..|+-+
T Consensus 212 ~~G~Ieqvg~p~ev~~--------~P~s~fV~~f~G~ 240 (345)
T COG1118 212 NQGRIEQVGPPDEVYD--------HPASRFVARFLGE 240 (345)
T ss_pred cCCeeeeeCCHHHHhc--------CCCccceeccccc
Confidence 9999999999999843 3555555555433
No 66
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=354.60 Aligned_cols=207 Identities=28% Similarity=0.442 Sum_probs=175.6
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCC---CCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQH---DLHHGEMT 261 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 261 (1389)
++|+|||+++++|++++|+||||||||||+|+|.|.++|. +|+|.++|.+......+..+|||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 5999999999999999999999999999999999999987 99999999988776666789999996 44454 79
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+|.+..+..-+. ....... +++...+++.|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~-----g~~~~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK-----GWFRRLN-------------------------KKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc-----ccccccc-------------------------HHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999988632111 0011111 11234578899999999999999998
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||+|||-|||||+.+|++|+|||||+|+|+.++..|.+.|+++.+. |+||+++. |....+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~vt-HDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMVT-HDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEe-CCcHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999987 77777665 55668999999999996 56
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 889999998753
No 67
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-39 Score=350.53 Aligned_cols=193 Identities=30% Similarity=0.462 Sum_probs=167.4
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhh-heeeEeccCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFA-RVSGYCEQNDIHS 952 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~-~~~gyv~Q~~~~~ 952 (1389)
..+|++||++|++||++||||||||||||||++|.|...+ .+|.+.++|.+... ..+| +.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999997664 57999999976532 2233 5699999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLND-SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
|.+||.||+.+...+.... ..+.++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554322 2255667899999999987666 44 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
|||.+||+.+...|+++++++.++ |+|||++|||| ++...|||++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999765 89999999996 57889999999986 55
No 68
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=336.89 Aligned_cols=217 Identities=24% Similarity=0.356 Sum_probs=185.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCC---CCCceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~---~~~g~~~G~i~i~g 930 (1389)
.++++|++.++ +.+++|+|||+.|++++++||||||||||||||++|.+. ..+-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 46677777654 457899999999999999999999999999999999983 23446789999999
Q ss_pred ccCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000615 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGV 1004 (1389)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~ 1004 (1389)
.++. ...+|+.+|.|+|.|.-|| +|++||+.|+.++....+ ++.++.|++.|+...|++- .|++ ... .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL-~~s-a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRL-HKS-A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHh-hCC-c
Confidence 8753 3468899999999999999 999999999988775433 6777889999999999764 4443 222 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
.+|||||+|||||||+|+.+|+||+||||||+|||.+...|-++|.++. +.-|||++||.+. ......|+...+.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 4799999999999999999999999999999999999999999999997 4789999999876 57788899999985 8
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999986
No 69
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.1e-35 Score=392.48 Aligned_cols=216 Identities=22% Similarity=0.367 Sum_probs=185.0
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++++|++..++ .+++.+|+|||+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 4678888776542 1235699999999999999999999999999999999998653 48999999987
Q ss_pred CCh--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 933 KNQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 933 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.+++++++++.++|.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 642 3356779999999999999999999999876643 223344567899999999998888774 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|+++. +|+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999976 56678999999985 8999998
Q ss_pred CC
Q 000615 1091 PL 1092 (1389)
Q Consensus 1091 ~~ 1092 (1389)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 70
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=348.14 Aligned_cols=192 Identities=25% Similarity=0.349 Sum_probs=170.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
.++|+|+|++|++||+++|+||||||||||||+|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999997 999999999884 3567899999999999999999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
||+.|+....+.. +.| ....++..|+.+||.+..|....+ |
T Consensus 91 ~NV~l~l~~~~~~----------~~e------------------------~~~~a~~~L~~VgL~~~~~~~P~q-----L 131 (248)
T COG1116 91 DNVALGLELRGKS----------KAE------------------------ARERAKELLELVGLAGFEDKYPHQ-----L 131 (248)
T ss_pred hhheehhhccccc----------hHh------------------------HHHHHHHHHHHcCCcchhhcCccc-----c
Confidence 9999987765421 111 112467789999999999988876 9
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..+.|+++.+ |.-.|...++|+|++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVT-Hdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVT-HDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEe-CCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999999999999999999999999887777777665 5567999999999999984
No 71
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=370.74 Aligned_cols=201 Identities=28% Similarity=0.417 Sum_probs=183.4
Q ss_pred eeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCCCHHHH
Q 000615 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1389)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1389)
+|+|||++|++||.++|+|||||||||||++|||... +.+|+|.|+|.+.+. ...+|.+|+|+|+..++|+|||+||
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~N 95 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYEN 95 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHH
Confidence 9999999999999999999999999999999999876 358999999998765 3456889999999999999999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHH
Q 000615 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1389)
Q Consensus 961 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1040 (1389)
+.|+.+++. .++++.+++|.++.+.++|.++.|+. +++|||||||||+|||||+++|++++||||.|+||+.
T Consensus 96 iaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~ 167 (338)
T COG3839 96 IAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAK 167 (338)
T ss_pred hhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHH
Confidence 999987763 45678888999999999999999998 4689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
.+..+...|+++.++ |.|+|.+|||. .|...++|++.+|. +|++...|++.+
T Consensus 168 lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~p~e 220 (338)
T COG3839 168 LRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGTPLE 220 (338)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCChHH
Confidence 999999999998755 89999999996 48889999999998 689999998743
No 72
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-39 Score=340.74 Aligned_cols=210 Identities=25% Similarity=0.400 Sum_probs=180.2
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDL 255 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 255 (1389)
..+.|++|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++..... ++.+|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4567999999999999999999999999999999999999998 9999999999876543 467999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccc-cccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC-ADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~-~dt~ 334 (1389)
+|..+||+||+.|-.+-.. .+ |...+ +..+..-|+..||... +|..
T Consensus 96 LFssltV~eNVafplre~~---------~l----------p~~~i--------------~~lv~~KL~~VGL~~~~~~~~ 142 (263)
T COG1127 96 LFSSLTVFENVAFPLREHT---------KL----------PESLI--------------RELVLMKLELVGLRGAAADLY 142 (263)
T ss_pred cccccchhHhhheehHhhc---------cC----------CHHHH--------------HHHHHHHHHhcCCChhhhhhC
Confidence 9999999999998543211 01 11111 1234445788999866 7776
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
..+ ||||++||+++|||++.+|+++|+||||+||||.++..+.++++++.+..+.|+++..| ..++++..+|+|
T Consensus 143 PsE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTH-Dl~s~~~i~Drv 216 (263)
T COG1127 143 PSE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTH-DLDSLLTIADRV 216 (263)
T ss_pred chh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEEC-ChHHHHhhhceE
Confidence 666 99999999999999999999999999999999999999999999999988888887765 567999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1389)
++|.+|+|+..|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999864
No 73
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5e-39 Score=326.75 Aligned_cols=199 Identities=28% Similarity=0.385 Sum_probs=174.2
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+||||.|++||++-|+||||||||||||+|.+... +..|+|.++|+++.. .-+||.+|+|+||..+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 569999999999999999999999999999999999655 347999999998643 236789999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
+.||+||+.|...... .+.++.+++|.++|+.+||.+.++.. +..|||||+|||+||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 9999999999876653 34567778899999999999988876 568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhC-eEEEEecCcEEEEecC
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD-ELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d-~~l~l~~gG~~~~~g~ 1091 (1389)
|-+|||..+..|++++.++...|.|||+.||+. ++.+.+. +++.|. .|+++....
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~-~Grl~~d~~ 220 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALE-DGRLVRDES 220 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEe-CCEEEeccc
Confidence 999999999999999999998899999999985 4555554 566666 588887654
No 74
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-39 Score=339.52 Aligned_cols=217 Identities=27% Similarity=0.367 Sum_probs=184.6
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDL 255 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 255 (1389)
.++++|+|||+.|++||+++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 5678999999999999999999999999999999999999987 9999999988766542 468999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
+.+.+||.+|+..+...+. +.++.+ .+..+. +....+-..|+.+|+.+.+-+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~sl---------fglfsk---------------~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSL---------FGLFSK---------------EDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHH---------hCCCCH---------------HHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999988743221 111111 111111 11223445788999999998988
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
++ |||||+|||+|||||+.+|++++-|||+++|||.++.++++.|+++.+..|.|+|+.+||- .-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~v-dlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQV-DLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHHhhhe
Confidence 87 9999999999999999999999999999999999999999999999998899999998875 47789999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000615 416 LLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1389)
-|++|+|+|.||++|+.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999998754
No 75
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=331.75 Aligned_cols=212 Identities=31% Similarity=0.366 Sum_probs=184.9
Q ss_pred CCCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCC
Q 000615 178 PSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDL 255 (1389)
Q Consensus 178 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~ 255 (1389)
++++...++++||||+++.||+++|+|||||||||+|++|++++.|+ +|+|++||.+..... .++.+|.++.+..
T Consensus 9 K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~g 85 (245)
T COG4555 9 KSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERG 85 (245)
T ss_pred hhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcC
Confidence 34445556999999999999999999999999999999999999998 999999999875432 3688999998889
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
++..||++|||.|.+++.+. ++.+ .+.+++.+.+.|+|.+|.|+.+
T Consensus 86 lY~RlT~rEnl~~Fa~L~~l----------~~~~------------------------~kari~~l~k~l~l~~~~~rRv 131 (245)
T COG4555 86 LYARLTARENLKYFARLNGL----------SRKE------------------------IKARIAELSKRLQLLEYLDRRV 131 (245)
T ss_pred hhhhhhHHHHHHHHHHHhhh----------hhhH------------------------HHHHHHHHHHHhChHHHHHHHH
Confidence 99999999999998776432 2221 2335788899999999999999
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
|+ +|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++.. .++++|.+. |..+|+..+||+|+
T Consensus 132 ~~-----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFSS-H~m~EvealCDrvi 204 (245)
T COG4555 132 GE-----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFSS-HIMQEVEALCDRVI 204 (245)
T ss_pred hh-----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEec-ccHHHHHHhhheEE
Confidence 98 999999999999999999999999999999999999999999999865 366766664 56789999999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000615 416 LLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1389)
+|++|++++.|+.+++.+
T Consensus 205 vlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 205 VLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEecCcEEEcCCHHHHHH
Confidence 999999999999988764
No 76
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.4e-39 Score=400.87 Aligned_cols=207 Identities=29% Similarity=0.466 Sum_probs=184.0
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1389)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ |+.++||+|++.+|. .|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-Cc
Confidence 6899999999999999999999999999999999999997 9999999999988765 689999999998885 69
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.++. |+.+.++.++|+..++.+.. +..++..+||.||+ ++.
T Consensus 563 I~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~~f--------I~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGN-------------------------PEATDEEIIEAAQLAGAHEF--------IENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcHHH--------HHhccccccccccc-CCC
Confidence 999998852 33445566777776665322 45699999999996 677
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|+++.+ ++|+|+..|.+ .+.+.||+|+||++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 8999999999999999999999999999999999999999999999875 67888887765 6899999999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
++.+|+++|+++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 77
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.5e-38 Score=367.46 Aligned_cols=214 Identities=28% Similarity=0.399 Sum_probs=185.1
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..+ +++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~-------------~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRY-------------GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEE-------------CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 46778877544 235699999999999999999999999999999999997653 479999999876
Q ss_pred Ch--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. .+..+..++++++++.++|.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 3456789999999999999999999998765542 233444556889999999998888775 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
||||+||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 67788999999985 89999998
Q ss_pred C
Q 000615 1092 L 1092 (1389)
Q Consensus 1092 ~ 1092 (1389)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 78
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-39 Score=369.40 Aligned_cols=206 Identities=27% Similarity=0.397 Sum_probs=184.5
Q ss_pred cccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCC
Q 000615 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~l 955 (1389)
+++..+|+|||++|++||+++|+|||||||||||++|||...+ .+|+|.++|.++.. ...+|.+|+|+|+-.+||+|
T Consensus 15 yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHl 92 (352)
T COG3842 15 FGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHM 92 (352)
T ss_pred cCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCChhhcccceeecCcccCCCC
Confidence 4467899999999999999999999999999999999998763 48999999998765 33568899999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000615 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1389)
||+||+.|+.+++ ....+++.+++|+++++.++|.++.++. +..|||||||||+|||||+.+|++|+||||.|
T Consensus 93 tV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQqQRVALARAL~~~P~vLLLDEPlS 165 (352)
T COG3842 93 TVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQQRVALARALVPEPKVLLLDEPLS 165 (352)
T ss_pred cHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHHHHHHHHHHhhcCcchhhhcCccc
Confidence 9999999997743 2344566788999999999999999887 45899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1036 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+||..-+..++..++++.++ |.|.|++|||.. |...+.|++.+|+ +|++.-.|++.
T Consensus 166 aLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~-~G~I~Q~gtP~ 222 (352)
T COG3842 166 ALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMN-DGRIEQVGTPE 222 (352)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEcc-CCceeecCCHH
Confidence 99999999999999998754 999999999976 7889999999998 58999988874
No 79
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-38 Score=340.92 Aligned_cols=195 Identities=26% Similarity=0.405 Sum_probs=170.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1389)
.++|++||+.|++||+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 68999999999999999999999999999999999999987 9999999999876642 3579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccc-ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD-TMV 335 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~d-t~v 335 (1389)
+|.+||+||+.+.....+.... ......+.+++.+||++..+ ..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p 140 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKKP 140 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCCc
Confidence 9999999999976554432210 01223567889999997666 777
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
.+ |||||||||+|||||+.+|++++.||||.+||+.++..|++.++++.+..+.|+|+++|.| ++...|||++
T Consensus 141 ~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i 213 (226)
T COG1136 141 SE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVI 213 (226)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999999988788988888765 7888999999
Q ss_pred EEcCCeE
Q 000615 416 LLSEGQI 422 (1389)
Q Consensus 416 lL~~G~i 422 (1389)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999984
No 80
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-38 Score=319.43 Aligned_cols=201 Identities=25% Similarity=0.403 Sum_probs=179.2
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCHHHHHH
Q 000615 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1389)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1389)
.+++.|++||++||+||||||||||||+|+|+..|. +|+|.+||++.+...| +|-++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 578899999999999999999999999999999987 9999999999987665 588999999999999999999998
Q ss_pred HhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhH
Q 000615 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1389)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1389)
++.. ++-+ +.. +..+.++.++...||..+.++..++ |||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 8643 1111 111 1123467788999999999999988 99999
Q ss_pred hhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecC
Q 000615 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1389)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~ 427 (1389)
||||++||+|+.+-+||+||||+|+|||.-+.++...+.+++.+.+.|+++..|||. ++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999999988999999999886 8889999999999999999999
Q ss_pred hhHHH
Q 000615 428 RDNVL 432 (1389)
Q Consensus 428 ~~~~~ 432 (1389)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98865
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9.2e-38 Score=365.39 Aligned_cols=217 Identities=24% Similarity=0.329 Sum_probs=183.9
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|++..++.. ...+.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 5677877654210 1124699999999999999999999999999999999997663 4799999998764
Q ss_pred h---h---hhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000615 935 Q---E---TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 935 ~---~---~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1389)
. . ..++.+||++|+..+++..||+||+.|..... ..+.++.++++.++++.+||.+..|.. +..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 3 1 24668999999999999999999999875433 233455667789999999999888876 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|+ +|+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999765 999999999976 5678899999998 58999
Q ss_pred EecCC
Q 000615 1088 YAGPL 1092 (1389)
Q Consensus 1088 ~~g~~ 1092 (1389)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 82
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-38 Score=327.92 Aligned_cols=222 Identities=24% Similarity=0.399 Sum_probs=177.0
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCCC-----cCceEEEecCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL 255 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~ 255 (1389)
.+.+|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.++|+++.+.. .|+.+|+|+|.|.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3569999999999999999999999999999999988754 35678999999999986542 3689999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 334 (1389)
-|| +|++||+.|+.+..|... +.+.+ +++..|+.-+|- +..|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHh
Confidence 999 999999999998877542 11111 122222322332 122222
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
= +...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+++.++.+ +-|+|+.. |...++.+..|+.
T Consensus 144 ~--~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviVT-HnmqQAaRvSD~t 218 (253)
T COG1117 144 H--KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIVT-HNMQQAARVSDYT 218 (253)
T ss_pred h--CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEEe-CCHHHHHHHhHhh
Confidence 1 22456999999999999999999999999999999999999999999999985 45666655 5566899999999
Q ss_pred EEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl 452 (1389)
..+..|++++.|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999987 3457766666665
No 83
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-38 Score=369.88 Aligned_cols=206 Identities=26% Similarity=0.369 Sum_probs=180.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.++|++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999987 9999999999876544 4789999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.|+.+..+.. +. +....++.+++.+||++..|+.+++
T Consensus 94 ~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~----- 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------KA------------------------EIEERVAEAARILELEPLLDRKPRE----- 134 (356)
T ss_pred HHHHHhHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCChhHhhCChhh-----
Confidence 99999975432210 00 0112357789999999988888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQ-VEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999999876677877776654 589999999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 84
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.8e-38 Score=362.01 Aligned_cols=229 Identities=24% Similarity=0.360 Sum_probs=190.7
Q ss_pred cCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcCCCC
Q 000615 129 VGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGA 208 (1389)
Q Consensus 129 ~~~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 208 (1389)
..+..|+-+++|+|++.+- .++++||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y---------------------------------~~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSY---------------------------------GPKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEe---------------------------------CCCCceecceeEEecCCCEEEEECCCCC
Confidence 4567778889999988852 1334699999999999999999999999
Q ss_pred cHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHh
Q 000615 209 GKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAEL 285 (1389)
Q Consensus 209 GKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 285 (1389)
||||++++|.++++ . +|+|.+||+++.+..+ |+.+|||||+..+|.+ ||.+||.++..
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~-------------- 450 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNP-------------- 450 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCC--------------
Confidence 99999999999998 4 8999999999987754 5789999999888865 99999999732
Q ss_pred hHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeE
Q 000615 286 SRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLY 365 (1389)
Q Consensus 286 ~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~ill 365 (1389)
+...+++.++|..++- .|. ...|++.++|.||+ .++-|||||||||++|||++.+|+|++
T Consensus 451 -----------sas~eeV~e~~k~a~~-----hd~---i~~l~~GY~T~VGe-rG~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 451 -----------SASDEEVVEACKRAGL-----HDV---ISRLPDGYQTLVGE-RGLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred -----------CcCHHHHHHHHHHcCc-----HHH---HHhccccchhhHhh-cccccccchHHHHHHHHHHhcCCCeEE
Confidence 2222333444433332 232 34589999999998 233389999999999999999999999
Q ss_pred EecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHH
Q 000615 366 MDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 366 LDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 433 (1389)
+|||||.||+.|..++++.+.+.. .++|+|+..|.. .+...||+|++|++|++...|+++|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM--SGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc--CCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999843 478999888754 6889999999999999999999999986
No 85
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.1e-37 Score=362.37 Aligned_cols=206 Identities=25% Similarity=0.342 Sum_probs=178.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1389)
+++|+|||++|++|++++|+||||||||||+++|+|..+|+ +|+|.++|+++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999987 9999999999876532 45799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.|.....+.. +. +....+.++++.+||++..|..+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------KD------------------------EIKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999864432211 00 0112356788999999988888876
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+..+.|+|++.|+ ...+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~-~~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHE-MDVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999987667787777665 45788999999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 86
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-37 Score=348.77 Aligned_cols=202 Identities=26% Similarity=0.386 Sum_probs=173.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4699999999999999999999999999999999997653 47999999987532 234567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
.+||+||+.+...... ....++..+.+.++++.++|.+..++.+ ..|||||||||+||++|+.+|+||+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDEP 163 (235)
T cd03261 91 SLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDEP 163 (235)
T ss_pred CCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643221 1233444567889999999988777664 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|.+ |++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 164 TAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 9999999999999999999764 899999999986 57778999999985 899988874
No 87
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-37 Score=366.48 Aligned_cols=207 Identities=28% Similarity=0.428 Sum_probs=180.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999987 9999999999876543 4789999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.|+.+.++.. +. +....++.+++.+||++..|+.+.+
T Consensus 94 ~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~l~L~~~~~~~~~~----- 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------RA------------------------EVAERVAELLDLVGLPGSERKYPGQ----- 134 (353)
T ss_pred HHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCCchhhCChhh-----
Confidence 99999975432210 00 0122467789999999999888866
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|+++|||||+++||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~-~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQ-EEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876677887777655 589999999999999999
Q ss_pred EEecChhHHHH
Q 000615 423 VYQGPRDNVLE 433 (1389)
Q Consensus 423 v~~G~~~~~~~ 433 (1389)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 88
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-38 Score=325.61 Aligned_cols=210 Identities=26% Similarity=0.361 Sum_probs=185.1
Q ss_pred ccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhh----hhheeeEeccCC
Q 000615 874 GVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQET----FARVSGYCEQND 949 (1389)
Q Consensus 874 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~ 949 (1389)
.+++++++++++||+.+++||++||+|||||||||.+.++.|...+ .+|.|.+||.+++... .+..+||+||++
T Consensus 11 ~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~ 88 (243)
T COG1137 11 AKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEA 88 (243)
T ss_pred hHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccc
Confidence 3456778999999999999999999999999999999999997653 3799999999876432 334689999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000615 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1389)
Q Consensus 950 ~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1389)
..|..+||+||++.....+.. +....+++.+++++|+.+++.++++... ..||||||+|+-|||||+.+|+.++
T Consensus 89 SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiL 162 (243)
T COG1137 89 SIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFIL 162 (243)
T ss_pred hHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEE
Confidence 999999999999877666532 2333466667899999999999999873 3799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
||||++|+||-+...|+++++.+.+.|..|++|-|.-. |....|||.+++.+ |++...|.++
T Consensus 163 LDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 163 LDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999999987 89999999999985 8999999864
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=365.39 Aligned_cols=206 Identities=24% Similarity=0.391 Sum_probs=180.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..++|++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999987 9999999999876554 4789999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.|+.+.++.. +. +....++++++.+||.+..|+.+.+
T Consensus 96 ~eNi~~~l~~~~~~----------~~------------------------~~~~~v~~~l~~~gl~~~~~r~~~~----- 136 (351)
T PRK11432 96 GENVGYGLKMLGVP----------KE------------------------ERKQRVKEALELVDLAGFEDRYVDQ----- 136 (351)
T ss_pred HHHHHHHHhHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999976533211 00 0122467789999999888888766
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQ-SEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876677777766554 589999999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 90
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.1e-37 Score=365.05 Aligned_cols=215 Identities=26% Similarity=0.373 Sum_probs=186.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..+ +.+.+|+|||+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRF-------------GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEe-------------CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 36777776544 23569999999999999999999999999999999999865 3489999999876
Q ss_pred Ch-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
.. ...+|.+|||+|+..++|++||+||+.|....+ ..+..+.+++++++++.++|.++.++. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 234578999999999999999999999986543 233455667899999999999988876 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ +....+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 78889999999985 89999998
Q ss_pred CC
Q 000615 1092 LG 1093 (1389)
Q Consensus 1092 ~~ 1093 (1389)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 63
No 91
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.1e-37 Score=360.24 Aligned_cols=202 Identities=27% Similarity=0.400 Sum_probs=176.6
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45799999999999999999999999999999999997653 47999999987532 234667999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1389)
|+||+.+.+.++. ....+.++.++++++.++|.+..++.+ +.|||||||||+||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 223344556899999999988877764 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 67788999999985 899999875
No 92
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.2e-37 Score=362.61 Aligned_cols=208 Identities=22% Similarity=0.329 Sum_probs=180.4
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1389)
.+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999987 9999999999876543 468999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
+++++||+||+.|+.+..+.. +.+ ....+..+++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWP----------EQE------------------------RKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHhcCCchhhhCCh
Confidence 999999999999975543211 000 1123567889999998888888
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
++ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+..++|+|++.|+ ..++..++|+|+
T Consensus 128 ~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd-~~ea~~~~drI~ 201 (363)
T TIGR01186 128 DE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHD-LDEAIRIGDRIV 201 (363)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEE
Confidence 77 999999999999999999999999999999999999999999999976557787776654 558899999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000615 416 LLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1389)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 93
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-37 Score=362.92 Aligned_cols=215 Identities=25% Similarity=0.392 Sum_probs=186.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..+ +++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRF-------------GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEE-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 46778877544 234699999999999999999999999999999999998663 489999999876
Q ss_pred Chh-hhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 934 NQE-TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 934 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
... ..+|.+|||+|+..++|++||+||+.|....+. ....+.+++++++++.++|.++.++. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 234779999999999999999999999865432 34456667899999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
|||+|||||+.+|+||+|||||||||+.++..+.+.|+++.++ |+|+|++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999985 89999998
Q ss_pred CC
Q 000615 1092 LG 1093 (1389)
Q Consensus 1092 ~~ 1093 (1389)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 94
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=365.67 Aligned_cols=215 Identities=25% Similarity=0.355 Sum_probs=185.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|++..++ +++.+|+|||+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 56777765431 23569999999999999999999999999999999999765 35899999998764
Q ss_pred h-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000615 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1389)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1389)
. ...++.+|||+|++.++|++||+||+.|....+ ..+..+..++++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 3 223478999999999999999999999986543 2344555677899999999998888874 579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||+|||||+.+|+||+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+.+|++++|. +|+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 6888999999997 5899999986
Q ss_pred C
Q 000615 1093 G 1093 (1389)
Q Consensus 1093 ~ 1093 (1389)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 4
No 95
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-36 Score=361.94 Aligned_cols=223 Identities=26% Similarity=0.430 Sum_probs=183.6
Q ss_pred cccccc-CCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEE
Q 000615 845 GMILPF-QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE 923 (1389)
Q Consensus 845 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~ 923 (1389)
|...|. -...++|+||++.++..+ +..+|+|+||+|+|||.+||+||||+||||+.++|....+ +.+
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--Pts 522 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTS 522 (716)
T ss_pred CccccccccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 443442 345799999999997644 4679999999999999999999999999999999998655 458
Q ss_pred EEEEEcCccCC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHH-----HHHHHHHHHcCCcccc
Q 000615 924 GDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELVELKSLN 995 (1389)
Q Consensus 924 G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l~L~~~~ 995 (1389)
|+|.+||+|+. ...+++++|+|.|+|.+|. -||+||+.|+.. +.+.++.. +.+++-+. ++.+-.
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY 594 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGY 594 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCcccc
Confidence 99999999864 4668899999999999976 499999999753 23333222 11222222 345567
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhC
Q 000615 996 DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1075 (1389)
Q Consensus 996 ~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 1075 (1389)
|+.+|..|. .||||||||++|||||++||.||||||+||+||+++...|+++|.++.+ ++|||+|+|+++ ..+.+|
T Consensus 595 ~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad 670 (716)
T KOG0058|consen 595 NTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHAD 670 (716)
T ss_pred ccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--Hhhhcc
Confidence 888987654 6999999999999999999999999999999999999999999998875 699999999965 788999
Q ss_pred eEEEEecCcEEEEecCC
Q 000615 1076 ELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1076 ~~l~l~~gG~~~~~g~~ 1092 (1389)
+|+++++ |++++.|..
T Consensus 671 ~Ivvi~~-G~V~E~G~h 686 (716)
T KOG0058|consen 671 QIVVIDK-GRVVEMGTH 686 (716)
T ss_pred EEEEEcC-CeEEecccH
Confidence 9999985 899999964
No 96
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4e-37 Score=363.04 Aligned_cols=215 Identities=24% Similarity=0.335 Sum_probs=185.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEE--EEEEEcCc
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE--GDIKISGY 931 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~--G~i~i~g~ 931 (1389)
.++++|+++.+. +..+|+|||++|++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 467778776542 34699999999999999999999999999999999997653 36 99999998
Q ss_pred cCCh-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 932 PKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 932 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
+... ...++.+|||+|++.++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223567999999999999999999999986543 2344556677999999999999888874 589999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 67889999999985 89999
Q ss_pred ecCCC
Q 000615 1089 AGPLG 1093 (1389)
Q Consensus 1089 ~g~~~ 1093 (1389)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 97
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-37 Score=356.01 Aligned_cols=206 Identities=29% Similarity=0.437 Sum_probs=177.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
..+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999876432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.|.++..+... . +....++.+++.+||++..++.+++
T Consensus 97 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------A------------------------AARALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCchHhcCchhh----
Confidence 9999997654432110 0 0012356788899999999999876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|++++.|+. .++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~sH~l-~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 367777776654 58999999999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 98
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.5e-37 Score=361.38 Aligned_cols=214 Identities=27% Similarity=0.381 Sum_probs=184.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y-------------~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSY-------------GDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 47888887654 245699999999999999999999999999999999997653 489999999875
Q ss_pred Ch--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
.. ...++.+||++|++.+++.+||.|++.+.+.++. ....+..+.++++++.++|.+..++.+ ++|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 42 3456779999999999999999999987665432 223334456788999999998888775 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
||||+||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999985 89999998
Q ss_pred C
Q 000615 1092 L 1092 (1389)
Q Consensus 1092 ~ 1092 (1389)
+
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 5
No 99
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.1e-37 Score=364.17 Aligned_cols=218 Identities=26% Similarity=0.369 Sum_probs=185.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+||.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999999876544 4789999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.|+.+.++.. +. +....++++++.+||++..|+.+.+
T Consensus 104 ~eNi~~~l~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~p~~----- 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------AA------------------------EITPRVMEALRMVQLEEFAQRKPHQ----- 144 (375)
T ss_pred HHHHHHHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 99999975432211 00 0112357788999999988888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|++|+||||++|||..++.++.+.|+++.+..+.|+|++.|. ..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd-~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHD-QEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999987667777776654 5689999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 000615 423 VYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1389)
Q Consensus 423 v~~G~~~~~~~~F~~lG~~~p~~~~~adfl 452 (1389)
+..|+++++.+ .|....+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999998743 35554555554
No 100
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.3e-37 Score=362.72 Aligned_cols=206 Identities=22% Similarity=0.365 Sum_probs=179.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCce--eEEEECCeeCCCCCc-CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRAS--GKITYCGHELNEFVP-QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 260 (1389)
..+|+|+|++|++|++++|+|||||||||||++|+|..+|+ + |+|.++|+++....+ ++.++||+|++.+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 46999999999999999999999999999999999999987 7 999999999865543 46799999999999999
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+||+.|+.+..+.. +. +....++++++.+||++..|+.+++
T Consensus 95 tv~enl~~~l~~~~~~----------~~------------------------~~~~~v~~~l~~~gL~~~~~~~~~~--- 137 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------KA------------------------DIAERVADALKLVGLGDAAAHLPAQ--- 137 (362)
T ss_pred cHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHhcCCCchhhCChhh---
Confidence 9999999975433211 00 0112467789999999999998876
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhC-CCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHIL-DVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~-~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.|+|++.|+ ..++..++|+|++|++
T Consensus 138 --LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd-~~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 138 --LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHD-QDDALTLADKAGIMKD 214 (362)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998765 5677666654 5688999999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|+++..|+++++.
T Consensus 215 G~i~~~g~~~~~~ 227 (362)
T TIGR03258 215 GRLAAHGEPQALY 227 (362)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999884
No 101
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=341.22 Aligned_cols=214 Identities=26% Similarity=0.369 Sum_probs=186.3
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
+.++|++|.++. +..+|+|+|++|++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 567888876531 15799999999999999999999999999999999997663 4699999998854
Q ss_pred ----hhhhhheeeEeccCCCCC-CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 935 ----QETFARVSGYCEQNDIHS-PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 935 ----~~~~~~~~gyv~Q~~~~~-~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
...+++.+|||+|++..+ ..-||.|.+.|+..- ...+.++.+++++++++.+++.+++++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 456788999999998654 457999999998643 3455667888999999999999998876 458999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |.|||++|||.+ .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 689999999976 57777999999985 89999
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
+|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 102
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=330.90 Aligned_cols=216 Identities=26% Similarity=0.363 Sum_probs=177.1
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++.+|++..++.. .....+|+|||++|.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+..
T Consensus 4 l~v~nl~~~y~~~---------~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~ 72 (252)
T COG1124 4 LSVRNLSIVYGGG---------KFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLA 72 (252)
T ss_pred EEEeceEEEecCC---------cchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccC
Confidence 5677776544321 1112599999999999999999999999999999999997663 4899999997654
Q ss_pred hh----hhhheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCC
Q 000615 935 QE----TFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGL 1007 (1389)
Q Consensus 935 ~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~L 1007 (1389)
.. .+++.+.+|+||+. +.|..||++.|.-.... ...++.+ +++.++++.+||.+ ..++. +..|
T Consensus 73 ~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~eL 142 (252)
T COG1124 73 PKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHEL 142 (252)
T ss_pred ccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chhc
Confidence 32 46788999999985 67999999988655433 2233333 33899999999965 34443 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1008 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
|||||||+||||||+.+|++|+||||||+||+..+..|++++.++.++ |.|.|++|||.+. +...|||+++|.+ |++
T Consensus 143 SGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~i 220 (252)
T COG1124 143 SGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQI 220 (252)
T ss_pred ChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeE
Confidence 999999999999999999999999999999999999999999999754 7899999999874 7789999999985 899
Q ss_pred EEecCCC
Q 000615 1087 IYAGPLG 1093 (1389)
Q Consensus 1087 ~~~g~~~ 1093 (1389)
++.+|..
T Consensus 221 vE~~~~~ 227 (252)
T COG1124 221 VEIGPTE 227 (252)
T ss_pred EEeechh
Confidence 9999864
No 103
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.9e-37 Score=340.66 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=173.4
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++. +.+.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 456777765421 123599999999999999999999999999999999997653 4799999998753
Q ss_pred h------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000615 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1389)
. ...++.++|++|++.+++.+||.||+.+....+. ...++.++.++++++.++|.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999999999999999988754321 223344566899999999988777664 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777999999999976 56678999999975 54
No 104
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-37 Score=362.83 Aligned_cols=206 Identities=28% Similarity=0.426 Sum_probs=173.2
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 261 (1389)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||++..+.. ++++++||+|++.+++ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 7899999999999999999999999999999999999987 999999999987765 4689999999999987 59
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
+||||.++... .+.++..+++...+ +.+.+.-++..||.+|+ .++
T Consensus 411 ireNi~l~~~~-------------------------~s~e~i~~al~~a~---------l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARPD-------------------------ASDEEIIAALDQAG---------LLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCCc-------------------------CCHHHHHHHHHHhc---------HHHhhcCCCcccchhcc-CCC
Confidence 99999986321 11111111111111 12222226688999996 678
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
||||||+|||++|||++.+++++++||||++||.+++..|.+.|.++++ ++|+++..|++ +....+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999987 57888888765 5778899999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999864
No 105
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=339.11 Aligned_cols=199 Identities=30% Similarity=0.437 Sum_probs=169.2
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCCCHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 469999999999999999999999999999999999765 347999999987543 22345799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+..... ....+...+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765332 1223344456889999999988777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1039 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999876 4899999999976 57788999999985 7887654
No 106
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=336.63 Aligned_cols=198 Identities=27% Similarity=0.441 Sum_probs=170.3
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..++.++|++|++.+++.+||+|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 469999999999999999999999999999999999765 348999999987643 34567999999999999999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
|+.+....+. ....+..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9988654432 22334455688999999998777665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999998877899999999976 56678999999985 7877654
No 107
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.3e-36 Score=353.68 Aligned_cols=214 Identities=28% Similarity=0.377 Sum_probs=181.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSY-------------GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEe-------------CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 36777777654 234699999999999999999999999999999999997653 479999999875
Q ss_pred Ch--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
.. ...++.+||++|++.+++.+||+||+.+.+.... .+.++..+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2346779999999999999999999987554321 223344456788999999988777764 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999985 89999987
Q ss_pred C
Q 000615 1092 L 1092 (1389)
Q Consensus 1092 ~ 1092 (1389)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 108
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.2e-37 Score=359.12 Aligned_cols=204 Identities=23% Similarity=0.291 Sum_probs=178.0
Q ss_pred ccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhh----hheeeEeccCCC
Q 000615 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETF----ARVSGYCEQNDI 950 (1389)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~~ 950 (1389)
+.+.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ..+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34679999999999999999999999999999999999766 358999999987643 223 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 951 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
++|.+||+||+.|...+. ....++..+++.++++.++|.+..++.+ ..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2344556678999999999988877764 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
||||+|||+.++..+++.++++.++ |+|||++||+++ ++.+.+|++++|. +|+++..|+..
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~-~G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMK-AGEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEeeCCHH
Confidence 9999999999999999999999754 899999999976 5788899999997 58999998753
No 109
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-37 Score=390.19 Aligned_cols=214 Identities=25% Similarity=0.409 Sum_probs=185.1
Q ss_pred CCCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCC
Q 000615 178 PSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHD 254 (1389)
Q Consensus 178 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 254 (1389)
++.++..+||+|+|++|++|+.+||||||||||||.+.+|...|+|+ +|.|.+||++++..+. |+.+|.|+|+|
T Consensus 997 YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP 1073 (1228)
T KOG0055|consen 997 YPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEP 1073 (1228)
T ss_pred CCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCc
Confidence 45567788999999999999999999999999999999999999997 9999999999998875 57899999999
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 334 (1389)
.+|. .|+||||.|+... ...++.++|+..++.+ +. +.+|++++||.
T Consensus 1074 ~LF~-~TIrENI~YG~~~-------------------------vs~~eIi~Aak~ANaH-----~F---I~sLP~GyDT~ 1119 (1228)
T KOG0055|consen 1074 VLFN-GTIRENIAYGSEE-------------------------VSEEEIIEAAKLANAH-----NF---ISSLPQGYDTR 1119 (1228)
T ss_pred hhhc-ccHHHHHhccCCC-------------------------CCHHHHHHHHHHhhhH-----HH---HhcCcCcccCc
Confidence 9996 5999999997210 1233455566555443 22 45799999999
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
||+ .+..||||||||++||||+++||+||||||.||+||+++..-+.+.|.+... |+|.|+.-|.. .+.+.+|.|
T Consensus 1120 vGe-rG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIAHRL--STIqnaD~I 1194 (1228)
T KOG0055|consen 1120 VGE-RGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIAHRL--STIQNADVI 1194 (1228)
T ss_pred cCc-ccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEecch--hhhhcCCEE
Confidence 997 3445999999999999999999999999999999999999999999999865 67777776654 689999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1389)
+|+++|+|+++|++++++.
T Consensus 1195 ~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1195 AVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEECCEEEecccHHHHHh
Confidence 9999999999999999985
No 110
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=339.04 Aligned_cols=200 Identities=27% Similarity=0.426 Sum_probs=172.1
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 4699999999999999999999999999999999997653 47999999987642 3567999999999889999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
|+.+....+. ...+...+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654331 223344566889999999987777663 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEec-CcEEEEecCC
Q 000615 1040 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPL 1092 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~-gG~~~~~g~~ 1092 (1389)
.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|.+ +|+++..+++
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999864 4899999999986 57788999999985 5899888765
No 111
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=338.56 Aligned_cols=201 Identities=29% Similarity=0.403 Sum_probs=172.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 4699999999999999999999999999999999997653 47999999976532 2345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
+|++.+....+. ...++.++.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~~L 162 (220)
T cd03265 91 WENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGL 162 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 999988754431 223344556899999999988777764 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 163 DPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999876 899999999986 57778999999985 889888764
No 112
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-36 Score=359.67 Aligned_cols=215 Identities=22% Similarity=0.339 Sum_probs=185.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 477888876542 34699999999999999999999999999999999997663 479999999876
Q ss_pred Ch-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999976433 2334455667899999999998888774 57999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|.+ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999984 89999988
Q ss_pred CC
Q 000615 1092 LG 1093 (1389)
Q Consensus 1092 ~~ 1093 (1389)
..
T Consensus 229 ~~ 230 (375)
T PRK09452 229 PR 230 (375)
T ss_pred HH
Confidence 53
No 113
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-36 Score=386.03 Aligned_cols=207 Identities=26% Similarity=0.356 Sum_probs=173.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 36999999999999999999999999999999999999 75 8999999999987754 578999999999986 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++.. +.+.++..+++..++. +.. .-.|+++.||.||+. +
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~l------~~~--i~~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAWV------SEF--LPLLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhCH------HHH--HHhcccccccccccC-C
Confidence 99999988621 1112223333332221 111 234788999999974 5
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
..||||||||++||||++++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+..|++ ++.+.||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999998753 68888888877 577889999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++|+++
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999874
No 114
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=9.1e-37 Score=359.61 Aligned_cols=217 Identities=26% Similarity=0.402 Sum_probs=184.1
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|++..+ +.+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 3 L~i~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSF-------------GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEe-------------CCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 5667776543 234699999999999999999999999999999999997653 4799999998764
Q ss_pred h-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
. ...++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..++. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 3 22346799999999999999999999987653211 1233455566789999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999985 89999998
Q ss_pred CC
Q 000615 1092 LG 1093 (1389)
Q Consensus 1092 ~~ 1093 (1389)
..
T Consensus 221 ~~ 222 (353)
T PRK10851 221 PD 222 (353)
T ss_pred HH
Confidence 53
No 115
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=340.02 Aligned_cols=207 Identities=27% Similarity=0.370 Sum_probs=174.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999887 899999999876532 245799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.++....... ... +....++.+++.+||++..++.+++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~---------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (235)
T cd03261 90 DSLTVFENVAFPLREHTRL---------SEE------------------------EIREIVLEKLEAVGLRGAEDLYPAE 136 (235)
T ss_pred CCCcHHHHHHHHHhhccCC---------CHH------------------------HHHHHHHHHHHHcCCchhhcCChhh
Confidence 9999999998863311000 000 0012346678899998888888876
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|
T Consensus 137 -----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~-~~~~~~~d~v~~l 210 (235)
T cd03261 137 -----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDL-DTAFAIADRIAVL 210 (235)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999998764467777776654 4788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999988763
No 116
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-37 Score=310.60 Aligned_cols=196 Identities=27% Similarity=0.363 Sum_probs=171.4
Q ss_pred cceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhhheeeEeccCCCCCCCCCHHHHHHH
Q 000615 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVYESLLY 963 (1389)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 963 (1389)
..++.|++||++||+||||||||||||+|+|...+ .+|+|+|||.+.... ...|-++.++|+..+|.++||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 35678999999999999999999999999998774 489999999986542 345668999999999999999999987
Q ss_pred HHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000615 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1389)
Q Consensus 964 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1389)
+..-.+ ..+ .+.+++++.++..+||..+.+++. ..|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 653221 122 344567999999999999999884 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1044 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1044 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
++..++.+++++ +.|++++||+|+ |.....|+++++++ |+|.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999754 899999999998 89999999999985 899999986
No 117
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=357.24 Aligned_cols=217 Identities=25% Similarity=0.350 Sum_probs=182.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++. +.+++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~---------~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQ---------GGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCC---------CCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 467777765521 01135699999999999999999999999999999999997653 4799999998764
Q ss_pred h------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000615 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1389)
. ...++.+||++|++.+++.+||+||+.+....+ ....++..+.++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 2 123567999999999999999999999875443 1233444567899999999988777763 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
|||||||+|||+|+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|.+ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 56778999999984 8999
Q ss_pred EecCC
Q 000615 1088 YAGPL 1092 (1389)
Q Consensus 1088 ~~g~~ 1092 (1389)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98875
No 118
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-36 Score=335.72 Aligned_cols=199 Identities=27% Similarity=0.396 Sum_probs=169.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhhheeeEeccCCCCCCCCCHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++..|++
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 469999999999999999999999999999999999765 3479999999875421 2245799999999988899999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+....+ ....++.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~LD 162 (213)
T cd03301 91 DNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLD 162 (213)
T ss_pred HHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998865432 1223444556889999999988777764 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 163 AKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999864 899999999976 57778999999975 7888765
No 119
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=357.48 Aligned_cols=210 Identities=28% Similarity=0.426 Sum_probs=178.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 46999999999999999999999999999999999999987 9999999999865443 3679999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.|+.+....... ..+. +....++.+++.+||++..|+.+.+
T Consensus 92 ~eni~~~~~~~~~~~~------~~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~----- 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------PNAA------------------------AIKAKVTQLLEMVQLAHLADRYPAQ----- 136 (353)
T ss_pred HHHHHhhhhhcccccC------CCHH------------------------HHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 9999997543110000 0000 0112456789999999888888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|+|++.| ...++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTH-d~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTH-DQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999998765677766655 45689999999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 120
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=359.83 Aligned_cols=206 Identities=23% Similarity=0.319 Sum_probs=178.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
..+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.+|+++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999999865443 4789999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
.||+.|+.+..+.. +. +....++.+++.+||.+..|+.+.+
T Consensus 109 ~eNi~~~l~~~~~~----------~~------------------------~~~~~v~~~l~~l~L~~~~~~~~~~----- 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------KA------------------------EIASRVNEMLGLVHMQEFAKRKPHQ----- 149 (377)
T ss_pred HHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999975432211 00 0112356789999999888888766
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|++|||||||++||..++.++.+.|+++.+..+.|+|++.|+ ..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd-~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHD-QEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCC-HHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999877667777777655 4589999999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 121
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-37 Score=337.44 Aligned_cols=207 Identities=26% Similarity=0.372 Sum_probs=180.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCC----CCCcCceEEEecCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELN----EFVPQRTCAYISQHD-LHHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 258 (1389)
..+|+|+|+.|++|+.++|+||||||||||+++|+|.++|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999997 899999999865 223468899999996 4455
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
.-||.|.++|+.+..+.... +...+++.+++.+||.+.+|..+-+
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------------------------------e~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------------------------------EIEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------------------------------HHHHHHHHHHHHcCchhhccCCccc-
Confidence 67999999999887664310 0123578899999999999998876
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.+..+.|+|++. |....+..++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~t-Hd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVT-HDLELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEe-CcHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999886566777665 55678999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000615 419 EGQIVYQGPRDNVLE 433 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1389)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 122
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.8e-36 Score=336.73 Aligned_cols=198 Identities=30% Similarity=0.462 Sum_probs=170.7
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCHH
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 699999999999999999999999999999999997653 47999999987542 23467799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+....+ .....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 9998765433 1233444567899999999988777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999976 57788999999985 7877653
No 123
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=321.00 Aligned_cols=207 Identities=25% Similarity=0.359 Sum_probs=175.2
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHG 258 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 258 (1389)
..+||++||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+ ++.++||||....|+
T Consensus 15 ~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 15 KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 468999999999999999999999999999999999999886 8999999999988765 357999999999999
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhC-CcccccccccC
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG-LDICADTMVGD 337 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lg-L~~~~dt~vg~ 337 (1389)
.|||+|||..++...... +. . ....|.+.+.|= |.+..++.-|+
T Consensus 92 ~LTVeENL~~g~~~~~~~------------~~-----~------------------~~~~e~v~~lFP~Lker~~~~aG~ 136 (237)
T COG0410 92 RLTVEENLLLGAYARRDK------------EA-----Q------------------ERDLEEVYELFPRLKERRNQRAGT 136 (237)
T ss_pred hCcHHHHHhhhhhccccc------------cc-----c------------------cccHHHHHHHChhHHHHhcCcccC
Confidence 999999999875432110 00 0 000233333332 45556777777
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+..+ .+|+.+.|......+++|+.+||
T Consensus 137 -----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g-~tIlLVEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 137 -----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGG-MTILLVEQNARFALEIADRGYVL 210 (237)
T ss_pred -----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCC-cEEEEEeccHHHHHHhhCEEEEE
Confidence 999999999999999999999999999999999999999999999987544 55666789999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000615 418 SEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1389)
.+|++++.|+.+++..
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999999864
No 124
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-37 Score=326.73 Aligned_cols=222 Identities=25% Similarity=0.354 Sum_probs=186.5
Q ss_pred cccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC----ceEEEecCCCCC
Q 000615 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLH 256 (1389)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~ 256 (1389)
-....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ ..++..+|...+
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rl 90 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRL 90 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccc
Confidence 35678999999999999999999999999999999999999998 99999999999887764 468899999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
|++|||.||+..++..+.. +.......+-. .+ ..+....+..+|+.+||.+.+|+..|
T Consensus 91 F~~lTVlENv~va~~~~~~---~~~~l~~~~~~--------~~-----------e~~~~e~A~~~Le~vgL~~~a~~~A~ 148 (250)
T COG0411 91 FPGLTVLENVAVGAHARLG---LSGLLGRPRAR--------KE-----------EREARERARELLEFVGLGELADRPAG 148 (250)
T ss_pred cCCCcHHHHHHHHhhhhhh---hhhhhccccch--------hh-----------HHHHHHHHHHHHHHcCCchhhcchhh
Confidence 9999999999988654421 00000000000 00 01122346779999999999999999
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
+ ||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+..+.|++ .+-|...-++++||+|+|
T Consensus 149 ~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~til-lIEHdM~~Vm~l~dri~V 222 (250)
T COG0411 149 N-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTIL-LIEHDMKLVMGLADRIVV 222 (250)
T ss_pred c-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEE-EEEeccHHHhhhccEEEe
Confidence 8 9999999999999999999999999999999999999999999999875455554 456778899999999999
Q ss_pred EcCCeEEEecChhHHHH
Q 000615 417 LSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1389)
|+.|+++.+|+++++.+
T Consensus 223 l~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 223 LNYGEVIAEGTPEEVRN 239 (250)
T ss_pred ccCCcCcccCCHHHHhc
Confidence 99999999999999864
No 125
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.5e-36 Score=352.92 Aligned_cols=206 Identities=27% Similarity=0.422 Sum_probs=177.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999875421 2457999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+.++..+... .+ ....++.+++.+||++..++.+++
T Consensus 83 v~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------DE------------------------AEERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998654332110 00 012356789999999888998876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +.|++++.|+ ..++.++||+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvi~~sH~-~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE-GVTILLTTHY-MEEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEECCC-HHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999998764 6777777665 458889999999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998764
No 126
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=359.05 Aligned_cols=214 Identities=27% Similarity=0.363 Sum_probs=182.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+ +++.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 4 l~i~~l~~~~-------------~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i~ 68 (369)
T PRK11000 4 VTLRNVTKAY-------------GDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRMN 68 (369)
T ss_pred EEEEEEEEEe-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5677776544 234699999999999999999999999999999999997653 4799999998764
Q ss_pred h-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000615 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1389)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1389)
. ...++.+|||+|++.+++.+||+||+.|....+. ...++.+++++++++.++|.+..++.+ ..|||||||
T Consensus 69 ~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~Q 140 (369)
T PRK11000 69 DVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQ 140 (369)
T ss_pred CCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHH
Confidence 3 1234679999999999999999999998765432 233445567899999999988877764 479999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|.+ |+++..|++
T Consensus 141 RvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~ 218 (369)
T PRK11000 141 RVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKP 218 (369)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999998765 899999999986 67888999999984 899999885
Q ss_pred C
Q 000615 1093 G 1093 (1389)
Q Consensus 1093 ~ 1093 (1389)
.
T Consensus 219 ~ 219 (369)
T PRK11000 219 L 219 (369)
T ss_pred H
Confidence 3
No 127
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=356.96 Aligned_cols=215 Identities=23% Similarity=0.355 Sum_probs=185.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..+ ++..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSF-------------DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 47888877543 234699999999999999999999999999999999998663 479999999876
Q ss_pred Ch-hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
.. ...+|.+|||+|++.++|++||.||+.|....+ ..+..+.+++++++++.++|.+..++. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999976543 233455667799999999999888876 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .|.|+|++||+++ ++...+|++++|. +|+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~-~G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMN-RGKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEe-CCEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 6889999999998 489999998
Q ss_pred CC
Q 000615 1092 LG 1093 (1389)
Q Consensus 1092 ~~ 1093 (1389)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 63
No 128
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-36 Score=339.34 Aligned_cols=216 Identities=27% Similarity=0.387 Sum_probs=178.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56777766542 2469999999999999999999999999999999999765 34799999998754
Q ss_pred hh-hhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 935 QE-TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 935 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
.. ..++.++|++|++.+++.+||+||+.+....+.. ......+..+.++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 21 2245699999999999999999999886543211 00122334456889999999987777653 47999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
|||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999865 899999999986 57788999999974 88998887
Q ss_pred C
Q 000615 1092 L 1092 (1389)
Q Consensus 1092 ~ 1092 (1389)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 4
No 129
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.1e-37 Score=321.30 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=187.7
Q ss_pred cccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCC
Q 000615 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ 954 (1389)
++.+++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.++. .+.+|||+|.+.-++|.
T Consensus 10 K~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k 86 (300)
T COG4152 10 KSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPK 86 (300)
T ss_pred hccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCcc
Confidence 44567889999999999999999999999999999999999876 3589999999998754 45668999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+||.|.|.|.|.+. .++.++..+.++.+|+.+++....... ++.||.|++|++.+-.+++++|++++||||+
T Consensus 87 ~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPF 158 (300)
T COG4152 87 MTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPF 158 (300)
T ss_pred CcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCc
Confidence 99999999999887 456778888899999999998887776 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
|||||.+.+.+.+.+.++.++|.|||+++|++. .+-++||++++|++ |+.|..|++.
T Consensus 159 SGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 159 SGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred cCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 999999999999999999999999999999987 68899999999985 7888889863
No 130
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=321.80 Aligned_cols=204 Identities=26% Similarity=0.316 Sum_probs=174.1
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----cCceEEEecCCC--CCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHD--LHHG 258 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 258 (1389)
++|+|||++|.+||.++|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+||+ .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999997 999999998776543 357899999997 6778
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc-cccccccC
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-CADTMVGD 337 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~-~~dt~vg~ 337 (1389)
..||++.|.-..+..+.+. .+..+.++++.+||+. .++...-+
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l~R~P~e 141 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFLDRRPHE 141 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHHhcCchh
Confidence 8999999976544322110 1122567899999984 55665544
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+|||||..+|++|++|||||+||++.+.+|++.|.++.+..+.|.++. .|...-+..+||||+||
T Consensus 142 -----LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~I-sHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 142 -----LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFI-SHDLALVEHMCDRIAVM 215 (252)
T ss_pred -----cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEE-eCcHHHHHHHhhheeee
Confidence 999999999999999999999999999999999999999999999998877666655 55667899999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000615 418 SEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1389)
++|++++.++.+++..
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999999864
No 131
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.8e-36 Score=339.34 Aligned_cols=204 Identities=29% Similarity=0.403 Sum_probs=172.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh---h-hhheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE---T-FARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 469999999999999999999999999999999999765 3479999999875431 2 234699999999999999
Q ss_pred CHHHHHHHHHHhhcCCC-------CcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000615 956 TVYESLLYSAWLRLSSD-------VDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1389)
||+|++.+......... ....+..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----AGELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988654321110 01233445688999999998776665 3579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1029 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999999877999999999986 57778999999985 889888874
No 132
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.1e-36 Score=336.12 Aligned_cols=193 Identities=31% Similarity=0.437 Sum_probs=164.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh------h-hhheeeEeccCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE------T-FARVSGYCEQNDIHS 952 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 952 (1389)
+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 469999999999999999999999999999999999765 3479999999875321 1 245799999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1389)
+.+||+||+.+....+. ......++.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998764432 222334556889999999988776653 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1033 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
||+|||+.++..+.+.|+++++ .|+|||++||+++ ++ +.||++++|.+ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999977 5899999999976 34 48999999985 54
No 133
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-36 Score=358.07 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=177.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 46999999999999999999999999999999999999887 9999999998865433 4679999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.|+.+..+.. +. +....++.+++.+||++..|+.+++
T Consensus 93 ~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~lgL~~~~~~~~~~----- 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------KE------------------------EINQRVNQVAEVLQLAHLLDRKPKA----- 133 (369)
T ss_pred HHHHHhHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhcCChhh-----
Confidence 99999875432210 00 0112356788999999888888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~-~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQ-VEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998775577777776654 588899999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 134
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-36 Score=337.67 Aligned_cols=200 Identities=27% Similarity=0.337 Sum_probs=172.0
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh------hhhheeeEeccCCCCCCC
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE------TFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~~ 954 (1389)
.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 699999999999999999999999999999999997653 479999999875421 235679999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+|++||+.+....+. .......+.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654331 22334455688999999998877765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVME-KGEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999998765 899999999976 5677899999997 4899988864
No 135
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.4e-36 Score=350.96 Aligned_cols=212 Identities=23% Similarity=0.380 Sum_probs=181.8
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|++..+ +++.+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLY-------------GTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEE-------------CCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 5666766543 23569999999999999999999999999999999999765 34899999998754
Q ss_pred h--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 935 Q--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 935 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
. ...++.+||++|++.+++.+||.||+.+.+.++. .+.++..+.++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2356779999999999999999999998775542 223444556899999999998887764 47999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||+||+||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999986 67888999999984 899999986
No 136
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=345.70 Aligned_cols=206 Identities=23% Similarity=0.300 Sum_probs=174.2
Q ss_pred cccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hh----hhheeeEecc
Q 000615 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET----FARVSGYCEQ 947 (1389)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q 947 (1389)
+.++.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... .. .++.++|++|
T Consensus 32 ~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q 109 (269)
T cd03294 32 KKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQ 109 (269)
T ss_pred hhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEec
Confidence 345567799999999999999999999999999999999997653 47999999987532 11 1356999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 000615 948 NDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSI 1027 (1389)
Q Consensus 948 ~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~i 1027 (1389)
++.+++.+||+||+.+..... ........+.++++++.++|.+..++.+ ..||||||||++||++|+.+|+|
T Consensus 110 ~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~i 181 (269)
T cd03294 110 SFALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDI 181 (269)
T ss_pred CcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999998865432 1223344456889999999988777764 47999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1028 IFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1028 llLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 182 llLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 245 (269)
T cd03294 182 LLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMK-DGRLVQVGTP 245 (269)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999998754 899999999976 5778899999997 4899988874
No 137
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.6e-36 Score=334.38 Aligned_cols=221 Identities=36% Similarity=0.616 Sum_probs=179.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC-CceEEEEEEEcCccC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYIEGDIKISGYPK 933 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~g~~~G~i~i~g~~~ 933 (1389)
+.|+|+++..+.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +++.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 3567777654210 013579999999999999999999999999999999999754 123579999999877
Q ss_pred ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000615 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDE-VMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1389)
.....++.++|++|++.+++.+||+||+.|..................+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 555566789999999999999999999998765432222122223334555 89999988776665 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|.+ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877999999999974468899999999985 8888765
No 138
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.8e-36 Score=338.48 Aligned_cols=201 Identities=27% Similarity=0.375 Sum_probs=171.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hh-hhheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET-FARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 4699999999999999999999999999999999997653 47999999987532 12 235699999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000615 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1389)
||+||+.+....+. ....+..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+
T Consensus 91 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~ 162 (232)
T cd03218 91 TVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGERRRVEIARALATNPKFLLLDEPFA 162 (232)
T ss_pred cHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 99999987643321 22334445688999999998777765 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 163 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 217 (232)
T cd03218 163 GVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIY-EGKVLAEGTP 217 (232)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEEeCH
Confidence 99999999999999999877999999999986 6888899999998 4889888875
No 139
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=321.36 Aligned_cols=205 Identities=28% Similarity=0.412 Sum_probs=174.6
Q ss_pred ccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCCCC
Q 000615 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIH 951 (1389)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~ 951 (1389)
.|++.++|++||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++.. +..++.++||||....
T Consensus 12 ~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~i 89 (237)
T COG0410 12 GYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRI 89 (237)
T ss_pred cccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccc
Confidence 45668899999999999999999999999999999999997653 37999999998653 3456679999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE-LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 952 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
||.+||+|||..++..+.. ++.....++++.+.+- |.+.+++..| .|||||||.|+|||||+.+|++|+|
T Consensus 90 F~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLL 160 (237)
T COG0410 90 FPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLL 160 (237)
T ss_pred hhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEe
Confidence 9999999999988755432 1122222677888775 6677777755 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
||||.||-|.-.++|.+.|+++.++ |.||+++-+... ...+.+|+.++|.+ |++++.|+..
T Consensus 161 DEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~ 222 (237)
T COG0410 161 DEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAA 222 (237)
T ss_pred cCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHH
Confidence 9999999999999999999999866 779999998765 47788999999985 8999999864
No 140
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-37 Score=347.18 Aligned_cols=244 Identities=25% Similarity=0.424 Sum_probs=198.1
Q ss_pred hcHHHHHHHHHHHhhh------cCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceE
Q 000615 113 EDNEKFLKRIRHRTDR------VGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRI 186 (1389)
Q Consensus 113 ~~~~~~~~~~~~~~~~------~~~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~i 186 (1389)
-|-|++++-+++..+- .....++-.+.|+|++.. +.+.+++
T Consensus 507 iDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~---------------------------------Y~p~k~v 553 (790)
T KOG0056|consen 507 IDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFA---------------------------------YDPGKPV 553 (790)
T ss_pred hhHHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEe---------------------------------cCCCCce
Confidence 4666666655554442 234556678999988874 2345679
Q ss_pred eeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCCCCCCCCHH
Q 000615 187 LKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 187 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
|+||||++.||+.+|++||||+||||+|++|-..++.+ +|.|++||+++.... .++.+|.||||..+|.+ |+.
T Consensus 554 l~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNd-TI~ 629 (790)
T KOG0056|consen 554 LSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFND-TIL 629 (790)
T ss_pred eecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeecc-eee
Confidence 99999999999999999999999999999999999987 999999999987543 35789999999999965 999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC-
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG- 342 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG- 342 (1389)
.||.|+. |+...|++.+|++.++ ..| +++++++.++|.||+ ||
T Consensus 630 yNIryak-------------------------~~AsneevyaAAkAA~-----IHd---rIl~fPegY~t~VGE---RGL 673 (790)
T KOG0056|consen 630 YNIRYAK-------------------------PSASNEEVYAAAKAAQ-----IHD---RILQFPEGYNTRVGE---RGL 673 (790)
T ss_pred eheeecC-------------------------CCCChHHHHHHHHHhh-----HHH---HHhcCchhhhhhhhh---ccc
Confidence 9998862 2223333444433222 233 477899999999998 66
Q ss_pred -CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 343 -ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 343 -LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+|||+++..|.|++|||.||+||..+..+|..+|.+++. ++|.|+.-|. ..+.-.+|.|+++++|+
T Consensus 674 kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHR--LSTivnAD~ILvi~~G~ 749 (790)
T KOG0056|consen 674 KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHR--LSTIVNADLILVISNGR 749 (790)
T ss_pred ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeee--ehheecccEEEEEeCCe
Confidence 799999999999999999999999999999999999999999999986 5566665554 35677899999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
|++.|.++|++.
T Consensus 750 IvErG~HeeLl~ 761 (790)
T KOG0056|consen 750 IVERGRHEELLK 761 (790)
T ss_pred EeecCcHHHHHh
Confidence 999999999975
No 141
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-37 Score=314.97 Aligned_cols=210 Identities=22% Similarity=0.377 Sum_probs=181.4
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 257 (1389)
+++++++|||+.+++||+++++|||||||||.+.++.|+.+|+ +|+|.+||.+++.... +..+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567999999999999999999999999999999999999998 9999999999987754 34699999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
-.+||+|||.-..+.+.... .+ .+.+...+.+|+.|+|.|++|..-..
T Consensus 92 r~LtV~dNi~~vlE~~~~d~--------~~------------------------~~~~~~l~~LL~ef~i~hlr~~~a~s 139 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL--------KK------------------------AERKEELDALLEEFHITHLRDSKAYS 139 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch--------hH------------------------HHHHHHHHHHHHHhchHHHhcCcccc
Confidence 99999999976544321100 00 01123467899999999999988766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+++ .|..++++- |...|+..++||.+++
T Consensus 140 -----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLITD-HNVREtL~i~dRaYIi 212 (243)
T COG1137 140 -----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLITD-HNVRETLDICDRAYII 212 (243)
T ss_pred -----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEcc-ccHHHHHhhhheEEEE
Confidence 999999999999999999999999999999999999999999999987 466666665 5567999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000615 418 SEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1389)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999999864
No 142
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-36 Score=333.21 Aligned_cols=192 Identities=30% Similarity=0.402 Sum_probs=163.3
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCC-CCCCCCHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDI-HSPYVTVY 958 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 958 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+......++.++|++|++. .+..+||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999765 347999999987654445667999999974 34467999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+..... . . ..+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 1245789999999988777764 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 56678999999985 6653
No 143
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.2e-36 Score=359.55 Aligned_cols=217 Identities=29% Similarity=0.368 Sum_probs=182.7
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+ +++.+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y-------------~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEF-------------GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEE-------------CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 5677776543 34579999999999999999999999999999999999765 34799999998754
Q ss_pred h---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
. ..+++.+|||+|++.+++.+||+|++.+....... .....++.++.++++++.+++.+..++.+ +.||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 3 44567899999999999999999999886432110 01012234466899999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||||+.|||+|+++|+||||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999987 57789999999984 8999999
Q ss_pred CCC
Q 000615 1091 PLG 1093 (1389)
Q Consensus 1091 ~~~ 1093 (1389)
+..
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 864
No 144
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.1e-36 Score=336.82 Aligned_cols=202 Identities=26% Similarity=0.324 Sum_probs=170.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCC-----CCceEEEEEEEcCccCCh-----hhhhheeeEeccCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQND 949 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~-----~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 949 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++|.+... ...++.++|++|++
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 46999999999999999999999999999999999976 4 357999999987532 23456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000615 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1389)
Q Consensus 950 ~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1389)
.++ .+||+||+.+....+.. ....+.+++++++++.+++.+..+.... +..||||||||++||++|+.+|++|+
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~lll 164 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLL 164 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 887 79999999886543311 1122234568899999999876655421 25799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||||+|||+.++..+.+.|++++++ +|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 165 LDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 99999999999999999999999876 99999999976 56778999999985 899988875
No 145
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=345.32 Aligned_cols=218 Identities=21% Similarity=0.324 Sum_probs=178.8
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 5677877655310 00124699999999999999999999999999999999997653 4899999998764
Q ss_pred h-----hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000615 935 Q-----ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK--SLNDSMVGLPGVSG 1006 (1389)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~~g~~~~~~ 1006 (1389)
. ...++.+|||+|++. .+...||+||+.|..... ....++..+.++++++.++|. +..++. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 245678999999974 334579999998865432 234455566789999999996 556655 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|.+ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999976 56678999999985 89
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999875
No 146
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.2e-36 Score=336.72 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=172.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hhhhheeeEeccCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1389)
+.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 469999999999999999999999999999999999765 347999999987542 2345679999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+||+||+.+...... .....+..+.+.++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 92 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 164 (240)
T PRK09493 92 LTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSGGQQQRVAIARALAVKPKLMLFDEPT 164 (240)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987542111 122344456688999999998777765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (240)
T PRK09493 165 SALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDP 220 (240)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCH
Confidence 999999999999999999877999999999986 56678999999985 899998875
No 147
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.2e-36 Score=332.12 Aligned_cols=195 Identities=30% Similarity=0.427 Sum_probs=167.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCCCHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
+.+|+|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 469999999999999999999999999999999999765 348999999987542 23456799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+....+. . .++.++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99988654321 1 1245788999999988777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|.+ |++++.|
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999998877899999999976 56678999999985 7887654
No 148
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-36 Score=334.16 Aligned_cols=217 Identities=26% Similarity=0.360 Sum_probs=177.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 36788887655210 001469999999999999999999999999999999999765 3589999999875
Q ss_pred Chh------hh-hheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000615 934 NQE------TF-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1389)
Q Consensus 934 ~~~------~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1389)
... .. ++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.++|.+..+.. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 421 12 256999999999999999999998865432 122334456789999999998777665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
||||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++++ .|+|||++||+++ ..+.+|++++|. +|+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~-~G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMR-DGR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEE-CCE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 345578999987 589
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
+++.+++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 149
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=8.4e-36 Score=338.36 Aligned_cols=214 Identities=26% Similarity=0.376 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 56777776542 24699999999999999999999999999999999997653 4799999998653
Q ss_pred h-----------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000615 935 Q-----------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1389)
Q Consensus 935 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1389)
. ...++.++|++|++.+++.+||.||+.+...... ....+...+.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 1 2345679999999999999999999987543211 122334456688999999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999976 57778999999985
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 899988874
No 150
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-36 Score=339.18 Aligned_cols=204 Identities=30% Similarity=0.373 Sum_probs=170.3
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999765 347999999987542 234567999999999999
Q ss_pred CCCHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000615 954 YVTVYESLLYSAWLR-----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1389)
.+||+||+.+..... ...........+.+.++++.++|.+..+.. +..|||||||||+||++|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998753210 000111123345688899999998776665 3579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999986 57778999999985 899988875
No 151
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.8e-36 Score=351.05 Aligned_cols=206 Identities=30% Similarity=0.417 Sum_probs=176.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999876432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.|.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMS----------TR----------E--------------IEAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCchhhCCChhh----
Confidence 999998754332210 00 0 011245678899999999999877
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++++ .+.|++++.|+ ..++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilisSH~-l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHF-MEEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEECCC-HHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 46777777655 568999999999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
++++|+.+++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 152
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.4e-36 Score=331.88 Aligned_cols=192 Identities=29% Similarity=0.380 Sum_probs=164.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 469999999999999999999999999999999999765 347999999987542 124567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
.+||.||+.+....+. ...+..++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~lllLDEP 164 (214)
T TIGR02673 93 DRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLSGGEQQRVAIARAIVNSPPLLLADEP 164 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 9999999988754321 22333456788999999998766665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
|+|||+.++..+.+.|+++.++|+|||++||+++ ++...||++++|.+
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 165 TGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDD 212 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecC
Confidence 9999999999999999998777999999999986 57778999999975
No 153
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.6e-36 Score=331.76 Aligned_cols=194 Identities=26% Similarity=0.375 Sum_probs=166.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999755 347999999986532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
.+|++||+.+....+. ...++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654332 22344455688999999998776665 347999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
|+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999976 56667999999975 54
No 154
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-36 Score=351.75 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=176.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.+.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~ 140 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------KA----------E--------------IKARVTELLELVGLSDKADRYPAQ 140 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999864432210 00 0 012356688999999888888876
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|+. .++.++||+|++|
T Consensus 141 -----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~-~~i~~~~d~v~~l 214 (343)
T PRK11153 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEM-DVVKRICDRVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999775577877776655 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 155
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=323.11 Aligned_cols=210 Identities=28% Similarity=0.375 Sum_probs=182.1
Q ss_pred cccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCCC
Q 000615 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDI 950 (1389)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~ 950 (1389)
+..+...+++|||+++++||++||+||||||||||+|+|+|...+ .+|+|.++|.++.. ...+..++..+|...
T Consensus 12 k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~r 89 (250)
T COG0411 12 KRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITR 89 (250)
T ss_pred eecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeeccccc
Confidence 345678899999999999999999999999999999999997663 47999999998653 223456888999999
Q ss_pred CCCCCCHHHHHHHHHHhhc--------CC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000615 951 HSPYVTVYESLLYSAWLRL--------SS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVEL 1021 (1389)
Q Consensus 951 ~~~~lTv~E~l~f~~~lr~--------~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL 1021 (1389)
+|+.|||.||+..++..+. +. ....++..+++.++|+.+||.+.+|...| +||+||||||.|||||
T Consensus 90 lF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArAL 164 (250)
T COG0411 90 LFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARAL 164 (250)
T ss_pred ccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHH
Confidence 9999999999988754331 11 11345566778999999999999999865 6999999999999999
Q ss_pred hhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1022 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1022 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+.+|++|+||||.+||.+.....+.+.|+++.++ |.||++|-|+++ -+...||++++|.. |+++..|++.
T Consensus 165 a~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 165 ATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred hcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999999874 699999999998 48999999999985 8999999874
No 156
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.1e-36 Score=379.03 Aligned_cols=209 Identities=28% Similarity=0.439 Sum_probs=175.5
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1389)
++++|+|+|++++|||.+||+||+|||||||+++|.|+++|+ +|+|.+||+++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 456999999999999999999999999999999999999997 9999999999987764 578999999999997
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
.||+|||.++.. +...++..+++..++. .|. ...|++++||.||+ .
T Consensus 417 ~TI~~NI~~g~~-------------------------~at~eei~~a~k~a~~-----~d~---I~~lp~g~dt~vge-~ 462 (567)
T COG1132 417 GTIRENIALGRP-------------------------DATDEEIEEALKLANA-----HEF---IANLPDGYDTIVGE-R 462 (567)
T ss_pred ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHhCh-----HHH---HHhCcccccceecC-C
Confidence 799999998632 1122333444443321 122 22368899999994 5
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
+..||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++..|.+ .+...+|+|+||++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~iiIaHRl--sti~~aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLIIAHRL--STIKNADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEEEeccH--hHHHhCCEEEEEEC
Confidence 666999999999999999999999999999999999999999999997764 56888866655 45566999999999
Q ss_pred CeEEEecChhHHHH
Q 000615 420 GQIVYQGPRDNVLE 433 (1389)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1389)
|++++.|+++|++.
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999976
No 157
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=341.00 Aligned_cols=214 Identities=27% Similarity=0.369 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++ ++..+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 67788876542 123599999999999999999999999999999999997653 4799999998764
Q ss_pred h---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
. ...++.+||++|++. .++..||.||+.|..... .....+..+.++++++.++|.+..++.+ ..||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG 142 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYG 142 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHH
Confidence 2 334567999999973 445689999998864321 2333444556899999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 220 (274)
T PRK13647 143 QKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEG 220 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999976 46678999999974 8999988
Q ss_pred CC
Q 000615 1091 PL 1092 (1389)
Q Consensus 1091 ~~ 1092 (1389)
+.
T Consensus 221 ~~ 222 (274)
T PRK13647 221 DK 222 (274)
T ss_pred CH
Confidence 75
No 158
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.6e-36 Score=332.11 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=171.3
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 569999999999999999999999999999999999765 347999999987542 3345679999999999899999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
+||+.+....+. ....+..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654332 223334456889999999987777653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999875 699999999986 56678999999975 889888864
No 159
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=337.05 Aligned_cols=200 Identities=29% Similarity=0.419 Sum_probs=170.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+.++|++|++.+++.+||.|
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHH
Confidence 469999999999999999999999999999999999765 347999999987642 2345899999999899999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
|+.+....+ .....+..+.+.++++.++|.+..+.. +..|||||||||+||++|+.+|++|+|||||+|||+
T Consensus 90 ~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~ 161 (255)
T PRK11248 90 NVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDA 161 (255)
T ss_pred HHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCH
Confidence 998764432 122334455689999999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEec-CcEEEEecCC
Q 000615 1040 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPL 1092 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~-gG~~~~~g~~ 1092 (1389)
.++..+.+.|+++++ .|+|||++||+++ ++.+.||++++|.+ +|+++..++.
T Consensus 162 ~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 162 FTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999854 5899999999986 57788999999984 5899888764
No 160
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-36 Score=329.99 Aligned_cols=200 Identities=32% Similarity=0.449 Sum_probs=168.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999887 9999999998764332 4579999999999989999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.++....+.. .. + ....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KA----------E--------------IRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998754321100 00 0 011345678899999888888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQ-EEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765467777776654 578899999999999999
Q ss_pred EEec
Q 000615 423 VYQG 426 (1389)
Q Consensus 423 v~~G 426 (1389)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 161
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.1e-36 Score=305.61 Aligned_cols=205 Identities=25% Similarity=0.382 Sum_probs=176.5
Q ss_pred CCcccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecC
Q 000615 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQ 252 (1389)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q 252 (1389)
.+....++|+|||+.|++||++-|+||||||||||||+|.+...|+ +|+|.+||+++.... .+|.+|+|+|
T Consensus 10 ~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQ 86 (223)
T COG2884 10 AYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQ 86 (223)
T ss_pred hcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEee
Confidence 4445567999999999999999999999999999999999999987 999999999986553 2589999999
Q ss_pred CCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccc
Q 000615 253 HDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD 332 (1389)
Q Consensus 253 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~d 332 (1389)
+..+++..||.||++|..+..|... .+.+.++..+|+..||.+.++
T Consensus 87 D~rLL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~ 132 (223)
T COG2884 87 DFRLLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKAR 132 (223)
T ss_pred eccccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhh
Confidence 9999999999999999887765431 112345677899999999998
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
...-+ |||||||||+||||++.+|++|+-||||-+||+..+.+|++.+.++.+ .|+||+++.|. ..-+-.+-.
T Consensus 133 ~lP~~-----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~ATHd-~~lv~~~~~ 205 (223)
T COG2884 133 ALPSQ-----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMATHD-LELVNRMRH 205 (223)
T ss_pred cCccc-----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEEecc-HHHHHhccC
Confidence 88766 999999999999999999999999999999999999999999999876 57888887654 434556667
Q ss_pred eEEEEcCCeEEEecC
Q 000615 413 DIILLSEGQIVYQGP 427 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~ 427 (1389)
+++.|++|+++....
T Consensus 206 rvl~l~~Grl~~d~~ 220 (223)
T COG2884 206 RVLALEDGRLVRDES 220 (223)
T ss_pred cEEEEeCCEEEeccc
Confidence 999999999987543
No 162
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.3e-34 Score=363.20 Aligned_cols=216 Identities=28% Similarity=0.439 Sum_probs=178.9
Q ss_pred ccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEE
Q 000615 849 PFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKI 928 (1389)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i 928 (1389)
+.....++|+|++|.++. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|... +.+|+|.+
T Consensus 466 ~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 444567999999998753 22369999999999999999999999999999999999876 35899999
Q ss_pred cCccC---ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------cccc
Q 000615 929 SGYPK---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSM 998 (1389)
Q Consensus 929 ~g~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~ 998 (1389)
||++. +...+|+.+|||+|++.++. -|++||+.++. .+.+.+ .+.++++..|..+. .|+.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhcccccccc
Confidence 99985 45678999999999998864 59999998753 222222 24445555444332 3555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEE
Q 000615 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1389)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l 1078 (1389)
+|.. ..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|++.. .|+|+|+++|+++ ..+.+|+++
T Consensus 603 v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred cccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 6643 45799999999999999999999999999999999999999999999986 5899999999975 688999999
Q ss_pred EEecCcEEEEecCC
Q 000615 1079 LLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1389)
+|+ +|+++..|+.
T Consensus 679 Vl~-~Gkiv~~gs~ 691 (709)
T COG2274 679 VLD-QGKIVEQGSH 691 (709)
T ss_pred Ecc-CCceeccCCH
Confidence 998 5899999985
No 163
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=344.27 Aligned_cols=218 Identities=23% Similarity=0.316 Sum_probs=178.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++.. ......+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKK--------LPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCC--------CCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 6778888766311 00113599999999999999999999999999999999997653 4799999876431
Q ss_pred ---------------------------hhhhhheeeEeccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 000615 935 ---------------------------QETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVM 986 (1389)
Q Consensus 935 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l 986 (1389)
....++.+|||+|++ ..+...||+|++.|..... ..+.++..+++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123467799999986 2344579999998865432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000615 987 ELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1065 (1389)
Q Consensus 987 ~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1065 (1389)
+.+||. +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1066 PSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1066 ~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
++ ++.+.+|++++|.+ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 76 57788999999974 899999985
No 164
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.7e-35 Score=338.95 Aligned_cols=215 Identities=21% Similarity=0.300 Sum_probs=179.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 367888876542 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000615 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGL 1007 (1389)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 1007 (1389)
.. ...++.++|++|++.+++.+||.||+.+...... ....+...+.+.++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 32 1235679999999999999999999987543211 1223334456788999999988777763 579
Q ss_pred CHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1008 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++++|. +|++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~-~G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVA-DKKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999998765 899999999976 5778899999997 4899
Q ss_pred EEecCC
Q 000615 1087 IYAGPL 1092 (1389)
Q Consensus 1087 ~~~g~~ 1092 (1389)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 998875
No 165
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=343.20 Aligned_cols=218 Identities=24% Similarity=0.296 Sum_probs=178.2
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 57788887663110 0114599999999999999999999999999999999997653 4799999998763
Q ss_pred -------hhhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000615 935 -------QETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1389)
Q Consensus 935 -------~~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1389)
....++.+|||+|++. .+...||+||+.|..... ..+.++..+.++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1235567999999863 233479999998875322 233444456789999999996 556665 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|. +|
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KG 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 79999999999999999999999999999999999999999999999765 899999999986 5778899999997 58
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999875
No 166
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.6e-36 Score=338.37 Aligned_cols=204 Identities=26% Similarity=0.310 Sum_probs=169.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 469999999999999999999999999999999999765 347999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000615 954 YVTVYESLLYSAWLR-----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1389)
.+||+||+.+..... ........+.++++.++++.++|.+..+.. +..||||||||++||++|+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999997642110 000111223345688999999998776665 3579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 230 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAP 230 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCH
Confidence 999999999999999999999998754 899999999976 56678999999985 889888875
No 167
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-36 Score=336.24 Aligned_cols=201 Identities=26% Similarity=0.373 Sum_probs=171.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhhheeeEeccCCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 4699999999999999999999999999999999997653 47999999987532 334567999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS--LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
|+||+.+...++. ...+...+.+.++++.+++.+ ..+.. +..|||||||||+||++|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654331 223344566889999999985 55554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999765 899999999986 57788999999985 889988874
No 168
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=330.36 Aligned_cols=205 Identities=28% Similarity=0.414 Sum_probs=172.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999887 999999998775321 2357999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 90 v~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVP----------GA------------------------ERRERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHhhCChhh----
Confidence 999998864322110 00 0112356788999999888888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|+|++|.+|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~-~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHY-MEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999876546677776655 457888999999999999
Q ss_pred EEEecChhHH
Q 000615 422 IVYQGPRDNV 431 (1389)
Q Consensus 422 iv~~G~~~~~ 431 (1389)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987763
No 169
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=333.81 Aligned_cols=210 Identities=30% Similarity=0.440 Sum_probs=174.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 46999999999999999999999999999999999999887 9999999998764432 3579999999999989999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.++....+...+ .+.. +....++.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------PPEA-------------EIRAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------CCHH-------------HHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 9999886432211000 0000 0011346678899998878888776
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQ-EEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999765567888877765 477889999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 170
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=341.91 Aligned_cols=218 Identities=25% Similarity=0.357 Sum_probs=179.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 5678888766310 00113599999999999999999999999999999999997653 4799999998753
Q ss_pred -------hhhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000615 935 -------QETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1389)
Q Consensus 935 -------~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1389)
...+++.+|||+|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 123567899999986 3444 69999999875432 233455566789999999995 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999976 57788999999985 8
Q ss_pred EEEEecCCC
Q 000615 1085 RVIYAGPLG 1093 (1389)
Q Consensus 1085 ~~~~~g~~~ 1093 (1389)
++++.|+..
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999853
No 171
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=328.37 Aligned_cols=197 Identities=35% Similarity=0.513 Sum_probs=167.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|+|+++++| ++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 46999999999999 999999999999999999999765 347999999987532 2346779999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
.||+.+....+. ...++..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 161 (211)
T cd03264 90 REFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPTAGL 161 (211)
T ss_pred HHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988655432 222333456889999999987777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
|+.++..+.+.|+++++ +.|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 162 DPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999976 599999999976 46678999999985 7887654
No 172
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1e-35 Score=329.46 Aligned_cols=195 Identities=25% Similarity=0.360 Sum_probs=166.1
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hhhhheeeEeccCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1389)
+.+|+++|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 469999999999999999999999999999999999765 347999999987531 2346789999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+|+.||+.+...... ....++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 ~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 163 (213)
T cd03262 91 LTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMNPKVMLFDEPT 163 (213)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987642111 122334455688999999998776765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 164 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 164 SALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999877999999999986 56778999999985 54
No 173
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=339.06 Aligned_cols=208 Identities=24% Similarity=0.324 Sum_probs=175.9
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHD 254 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 254 (1389)
...++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3467999999999999999999999999999999999999887 8999999998764321 24699999999
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 334 (1389)
.+++.+||+||+.+.....+.. .. + ....++.+++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVP----------RA----------E--------------REERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCCHhHhhCC
Confidence 9999999999998864322110 00 0 011346678899999888888
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 158 ~~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~-~~~~~~~d~v 231 (269)
T cd03294 158 PDE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDL-DEALRLGDRI 231 (269)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhcCEE
Confidence 876 9999999999999999999999999999999999999999999998765567877776654 4788999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000615 415 ILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1389)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 174
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=341.50 Aligned_cols=218 Identities=26% Similarity=0.393 Sum_probs=177.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-----cCceEEEecCCCC-CC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL-HH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 257 (1389)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999986532 2467999999863 33
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc--ccccccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD--ICADTMV 335 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~--~~~dt~v 335 (1389)
...||+||+.|+....+.. +. +....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------EE------------------------EIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------HH------------------------HHHHHHHHHHHHcCCCchhhccCCc
Confidence 4579999998864322110 00 0112356788999997 5677777
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+ ..++.++||+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd-~~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHS-MEDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEE
Confidence 65 999999999999999999999999999999999999999999999977556777777665 457888999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000615 416 LLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~---~F~~lG~~~p~ 444 (1389)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23344555444
No 175
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.8e-35 Score=329.49 Aligned_cols=196 Identities=26% Similarity=0.326 Sum_probs=166.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---hhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... . .+++.++|++|++.+++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 469999999999999999999999999999999999765 347999999986532 1 24567999999998889
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
.+|+.||+.+....+ ....++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 164 (222)
T PRK10908 93 DRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLSGGEQQRVGIARAVVNKPAVLLADEP 164 (222)
T ss_pred cccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 999999998865433 123334445678999999998776665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
|+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 165 TGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 9999999999999999999777899999999986 56677899999985 6654
No 176
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=345.32 Aligned_cols=218 Identities=23% Similarity=0.350 Sum_probs=178.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 478999988764110 012359999999999999999999999999999999999765 3479999999764
Q ss_pred Ch-------------------hhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc
Q 000615 934 NQ-------------------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK 992 (1389)
Q Consensus 934 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 992 (1389)
.. ..+++.+|||+|++ .+++ .||+||+.|..... ..+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23567899999987 3554 59999998864321 223444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHH
Q 000615 993 -SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1071 (1389)
Q Consensus 993 -~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1071 (1389)
+..+.. +..|||||||||+|||+|+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 4579999999999999999999999999999999999999999999999877999999999976 467
Q ss_pred HhhCeEEEEecCcEEEEecCC
Q 000615 1072 EAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1072 ~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+.+|++++|.+ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 899999985
No 177
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=333.40 Aligned_cols=205 Identities=28% Similarity=0.373 Sum_probs=173.9
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHHG 258 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 258 (1389)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 8999999998765321 357999999999999
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
.+||+||+.+.....+.. .. .....++..++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------KA------------------------EIEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCChhhhhcChhh-
Confidence 999999998754322110 00 0011346678899999888887765
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEM-EVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998765567877777665 47788999999999
Q ss_pred CCeEEEecChhHHH
Q 000615 419 EGQIVYQGPRDNVL 432 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1389)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 178
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=8.9e-36 Score=332.09 Aligned_cols=199 Identities=31% Similarity=0.452 Sum_probs=167.4
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hh-hhheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET-FARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 469999999999999999999999999999999999765 347999999987532 11 245699999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELV-ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
|++||+.+...... ..+..+.+.++++.+ ++.+..+.. +..||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122334567788887 466655554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999976 57788999999974 899888864
No 179
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.7e-35 Score=331.12 Aligned_cols=200 Identities=31% Similarity=0.443 Sum_probs=168.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 469999999999999999999999999999999999765 347999999986532 1233579999999988899999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
+||+.+....+ ....++..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 92 ~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~L 163 (236)
T TIGR03864 92 RQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVGL 163 (236)
T ss_pred HHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 99998765432 1223334456889999999987776654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1038 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+.++..+.+.|+++++ +|+|||+++|+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 164 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 164 DPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999975 5899999999976 34 45999999985 889888864
No 180
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=329.20 Aligned_cols=201 Identities=27% Similarity=0.356 Sum_probs=170.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999886 9999999998764 346799999999989889999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
||+.++....+.. .. .....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVP----------KA------------------------EARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 9998864322110 00 0011356688899998888888766 9
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc--CCe
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~--~G~ 421 (1389)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDI-DEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999998665567877777665 47788999999999 799
Q ss_pred EEEecChh
Q 000615 422 IVYQGPRD 429 (1389)
Q Consensus 422 iv~~G~~~ 429 (1389)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 181
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3e-35 Score=334.95 Aligned_cols=215 Identities=21% Similarity=0.283 Sum_probs=178.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ .+.+|+|||++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 367788876542 24699999999999999999999999999999999997653 479999999765
Q ss_pred Ch----------------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-c
Q 000615 934 NQ----------------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-D 996 (1389)
Q Consensus 934 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 996 (1389)
.. ..+++.++|++|++.+++.+||+||+.+...... .....+..+++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 2345679999999999999999999987542111 122344456788999999997653 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCe
Q 000615 997 SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1076 (1389)
Q Consensus 997 ~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~ 1076 (1389)
.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 4579999999999999999999999999999999999999999999999877999999999986 56677999
Q ss_pred EEEEecCcEEEEecCC
Q 000615 1077 LLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1077 ~l~l~~gG~~~~~g~~ 1092 (1389)
+++|.+ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999985 899988874
No 182
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=337.61 Aligned_cols=216 Identities=23% Similarity=0.319 Sum_probs=177.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCC-CCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHD-LHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 259 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999987 9999999998865332 35799999997 36777
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.|+.+..+.. .. +....++.+++.+||++..+..+++
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------HE------------------------EMKERVNEALELVGMQDFKEREPAR-- 140 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998864322110 00 0112356788999999888888876
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ ..+|+|++|++
T Consensus 141 ---LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~ 215 (279)
T PRK13650 141 ---LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755788888887754 55 58999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 000615 420 GQIVYQGPRDNVLE---FFEHMGFKCP 443 (1389)
Q Consensus 420 G~iv~~G~~~~~~~---~F~~lG~~~p 443 (1389)
|+++..|+++++.. .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999988753 2334454433
No 183
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2e-35 Score=330.73 Aligned_cols=200 Identities=25% Similarity=0.300 Sum_probs=163.4
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCC--CCC
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND--IHS 952 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 952 (1389)
.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++ .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999765 347999999987542 23456799999998 466
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
+.+||+||+.+....... ....+.....++++++.+++. +..+.. +..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 789999999876543321 111111122235889999985 455554 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 999999999999999999999865 899999999986 56668999999985 7887654
No 184
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-35 Score=328.55 Aligned_cols=192 Identities=26% Similarity=0.374 Sum_probs=162.4
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---hhhhhheeeEeccCCC-CCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDI-HSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~-~~~~l 955 (1389)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.. ....++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999765 34799999998653 2345677999999975 36678
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000615 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1389)
|++||+.+....+ ........+.++++++.++|.+..++. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 122233445688999999998776665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
|||+.++..+.+.|++++++|+|||++||++. ++...||++++|.+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~ 209 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLED 209 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC
Confidence 99999999999999999877999999999976 56677999999975
No 185
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-36 Score=307.43 Aligned_cols=217 Identities=28% Similarity=0.410 Sum_probs=182.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
|+.+|++|++. .+++|++||++++|||++||+|||||||||||++|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 46678888753 46799999999999999999999999999999999997663 3799999999864
Q ss_pred h---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
. ..+.+..+.+||+..+....||+|-+.++..-... .-...+..+.++++|+..++.+++.+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 3 45667789999999988888999999987532211 1111233445789999999999887763 4799999
Q ss_pred HHHHHHHHHHhh------CCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1012 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1012 rqRl~ia~aL~~------~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++-||++. ....+|++++|. +|+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCe
Confidence 999999999975 346899999999999999999999999999999999999999985 677899999997 589
Q ss_pred EEEecCCCc
Q 000615 1086 VIYAGPLGH 1094 (1389)
Q Consensus 1086 ~~~~g~~~~ 1094 (1389)
++..|++.+
T Consensus 219 v~a~g~p~~ 227 (259)
T COG4559 219 VIASGSPQD 227 (259)
T ss_pred EeecCCHHH
Confidence 999998754
No 186
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.7e-35 Score=344.33 Aligned_cols=206 Identities=30% Similarity=0.416 Sum_probs=174.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 46999999999999999999999999999999999999887 999999999875322 2467999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 94 v~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~ll~~~~l~~~~~~~~~~---- 135 (303)
T TIGR01288 94 VRENLLVFGRYFGMS----------TR----------E--------------IEAVIPSLLEFARLESKADVRVAL---- 135 (303)
T ss_pred HHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCChhHhcCchhh----
Confidence 999998643321110 00 0 011245678899999988998876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.++||+|++|++|+
T Consensus 136 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~sH~~-~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 136 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVLESGR 212 (303)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999876 467777776655 58889999999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
+++.|+++++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999998754
No 187
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3e-35 Score=333.10 Aligned_cols=202 Identities=26% Similarity=0.345 Sum_probs=169.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcCccCCh-----hhhhheeeEeccCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH 951 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 951 (1389)
..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.+... ...++.++|++|++.+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 45999999999999999999999999999999999975421 127999999987542 2345679999999988
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 000615 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSI 1027 (1389)
Q Consensus 952 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~i 1027 (1389)
++ .|++||+.+....+. ....++..+.++++++.++|. +..+.. +..||||||||++||++|+.+|++
T Consensus 94 ~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~l 165 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPEV 165 (247)
T ss_pred CC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 88 999999988654331 122344456688999999997 444444 457999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1028 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1028 llLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 166 lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 166 LLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999876 589999999976 57788999999985 889988874
No 188
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=340.93 Aligned_cols=217 Identities=22% Similarity=0.343 Sum_probs=177.8
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 57788877653110 0123599999999999999999999999999999999997653 4799999998753
Q ss_pred h-------hhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000615 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1389)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1389)
. ..+++.+|||+|++ .+++ .||.||+.|..... ..+.++..+++.++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 24567899999986 3444 59999998865322 233445556789999999996 566654 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 57999999999999999999999999999999999999999999999975 4899999999976 56788999999985
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 899999875
No 189
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9.2e-36 Score=329.71 Aligned_cols=199 Identities=30% Similarity=0.451 Sum_probs=163.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCC--CCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHS--PYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 957 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999997653 4799999998653 3456799999998764 34899
Q ss_pred HHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000615 958 YESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1389)
Q Consensus 958 ~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1389)
+||+.+....+.. .....+...+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00111233456889999999987766653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999976 56778999999974 5 55543
No 190
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=340.13 Aligned_cols=216 Identities=24% Similarity=0.320 Sum_probs=180.2
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++.. ..+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 36788888765310 123599999999999999999999999999999999997653 479999999876
Q ss_pred Ch---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++..+.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 345677999999974 667789999998865332 2334455567899999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|. +|+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~-~G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMK-NGQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999976 34 6799999997 489998
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 191
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.6e-35 Score=331.53 Aligned_cols=215 Identities=25% Similarity=0.382 Sum_probs=174.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 8999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++....+... ..+. .. .... ......++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~---~~-~~~~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA---RA-RREE-------------REARERAEELLERVGLADLADRPAGE-- 143 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc---cc-cccH-------------HHHHHHHHHHHHHcCccchhhCChhh--
Confidence 999999988643221000 0000 00 0000 00112356788899998888888766
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 144 ---LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~-~~~~~~~d~i~~l~~ 218 (236)
T cd03219 144 ---LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVEHDM-DVVMSLADRVTVLDQ 218 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999876 467877776665 478889999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 192
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=339.29 Aligned_cols=216 Identities=26% Similarity=0.384 Sum_probs=180.2
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 478888887652 12469999999999999999999999999999999999765 3479999999875
Q ss_pred C-----hhhhhheeeEeccCCCC-CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000615 934 N-----QETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGL 1007 (1389)
Q Consensus 934 ~-----~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 1007 (1389)
. ...+++.+||++|++.. ....||+||+.+..... ..+.++..+.++++++.++|.+..++. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 12356779999999742 34679999998864322 223444456789999999998877776 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1008 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|.+ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999976 46678999999985 899
Q ss_pred EEecCCC
Q 000615 1087 IYAGPLG 1093 (1389)
Q Consensus 1087 ~~~g~~~ 1093 (1389)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999853
No 193
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=338.08 Aligned_cols=223 Identities=25% Similarity=0.374 Sum_probs=179.9
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CcCceEEEecCCC--C
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHD--L 255 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d--~ 255 (1389)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 99999999987531 1245799999986 4
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 334 (1389)
++ ..||.||+.|+....+.. +. + ....+..+++.+||. +..++.
T Consensus 97 l~-~~tv~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~L~~~~~~~~ 141 (288)
T PRK13643 97 LF-EETVLKDVAFGPQNFGIP----------KE----------K--------------AEKIAAEKLEMVGLADEFWEKS 141 (288)
T ss_pred cc-cchHHHHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhhccCC
Confidence 44 469999999875432211 00 0 112356678889996 456776
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.++||+|
T Consensus 142 ~~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vtHd~-~~~~~~~dri 214 (288)
T PRK13643 142 PFE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVTHLM-DDVADYADYV 214 (288)
T ss_pred ccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEE
Confidence 655 999999999999999999999999999999999999999999999875 367777776654 5788999999
Q ss_pred EEEcCCeEEEecChhHHHH---HHHhcCCCCCCCCChHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLE---FFEHMGFKCPERKGVADFL 452 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~---~F~~lG~~~p~~~~~adfl 452 (1389)
++|++|+++++|+++++.+ +++..|+.+|.....++.+
T Consensus 215 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 215 YLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 9999999999999998743 4556677776654444433
No 194
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=333.39 Aligned_cols=214 Identities=29% Similarity=0.389 Sum_probs=173.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999886 899999999876543 135799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.++..... . .. ..+ .+... . .....++.+++.+||++..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~-~-~~---~~~------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-S-TW---RSL------FGLFP-K--------------EEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccc-h-hh---hhh------cccCc-H--------------HHHHHHHHHHHHcCChhhhCCCccc
Confidence 99999999987532110 0 00 000 00000 0 0112345678899998877777765
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~-~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQV-DLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776655 4788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 195
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.94 Aligned_cols=214 Identities=28% Similarity=0.394 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+ +++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAY-------------KGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEe-------------CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 5667776543 23469999999999999999999999999999999999765 34799999998753
Q ss_pred h----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 Q----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
. ...++.++|++|++.+++.+||.||+.+...++. ....++.+..++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 2235679999999999999999999987643321 122334456688999999998766655 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999975 67788999999974 8899888
Q ss_pred CC
Q 000615 1091 PL 1092 (1389)
Q Consensus 1091 ~~ 1092 (1389)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 196
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.4e-35 Score=326.48 Aligned_cols=200 Identities=29% Similarity=0.398 Sum_probs=169.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 36999999999999999999999999999999999999887 9999999998764332 3579999999998989999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+..+..+.. .. +....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------KD------------------------EIDERVREVAELLQIEHLLDRKPKQ----- 130 (213)
T ss_pred HHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHHhCChhh-----
Confidence 99998764322110 00 0012356678899999888888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~-~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQ-VEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999865577888877665 478889999999999999
Q ss_pred EEec
Q 000615 423 VYQG 426 (1389)
Q Consensus 423 v~~G 426 (1389)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 197
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.1e-35 Score=343.00 Aligned_cols=229 Identities=20% Similarity=0.223 Sum_probs=182.5
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478888876654211000000011235699999999999999999999999999999999997653 479999999876
Q ss_pred Ch------hhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000615 934 NQ------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1389)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1389)
.. ..+++.++||+|++ .++|.+||.|++.+......+ ..+.++.++.+.++++.++|. +..+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 42 12456799999998 578899999999886543211 234455667788999999994 345554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
..|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|. +
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~-~ 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMY-L 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-C
Confidence 579999999999999999999999999999999999999999999999764 899999999976 4667899999998 4
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 899999985
No 198
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=7.1e-34 Score=377.61 Aligned_cols=135 Identities=22% Similarity=0.263 Sum_probs=108.7
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000615 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1026 (1389)
Q Consensus 951 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~---~~p~ 1026 (1389)
.+...||.|+|.++..-..+.....++..+.+ ++++.++|.+. .+.. +..||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45568999999887652222112223344455 58899999876 5655 3579999999999999998 5999
Q ss_pred CceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe-----cCcEEEEecCCC
Q 000615 1027 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPLG 1093 (1389)
Q Consensus 1027 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~-----~gG~~~~~g~~~ 1093 (1389)
+|+|||||+|||+.+...+++.|++++++|.|||+++|+++ .+ +.+|+++.|. .+|+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999976 34 8999999995 368999999864
No 199
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=334.24 Aligned_cols=206 Identities=22% Similarity=0.301 Sum_probs=174.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 478888876542 24699999999999999999999999999999999997653 479999998764
Q ss_pred ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000615 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1389)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999999998999999987421 0 1234578899999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|++||++|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999976 56778999999985 889888764
No 200
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.5e-35 Score=342.39 Aligned_cols=205 Identities=29% Similarity=0.446 Sum_probs=176.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999876432 2457999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|.||+.|.++..+... . +....++.+++.+||++..|+.+++
T Consensus 92 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------Q------------------------LLKQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHCCCchHhcCchhh----
Confidence 9999988654432110 0 0011356788999999989888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+++|++|+|||||+|||+.++.++.+.|+++++ +.|++++.|+ ..++.++||+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~sH~-l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILSTHI-MQEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEcCC-HHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999853 5677666655 458999999999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998865
No 201
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.2e-35 Score=327.32 Aligned_cols=195 Identities=26% Similarity=0.378 Sum_probs=163.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hh---hh-heeeEeccCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET---FA-RVSGYCEQNDIHS 952 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~---~~-~~~gyv~Q~~~~~ 952 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... .. ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 4699999999999999999999999999999999997653 47999999987532 11 22 5699999999888
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1389)
+.+||+||+.+....+. ....+..+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|+||+|||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 99999999988654331 122333456789999999987776653 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
||+|||+.++..+.+.|++++++ |+|||++||+++ .+ +.+|++++|.+ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 99999999999999999999764 899999999976 34 56899999985 6654
No 202
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=7.3e-34 Score=365.23 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=102.7
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CCce
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANP---SIIF 1029 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p---~ill 1029 (1389)
.+||.|++.|...+. . .....+.++.++|... .+.. +..||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 1124678999999763 4544 3579999999999999999999 9999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe-----cCcEEEEecCC
Q 000615 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPL 1092 (1389)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~-----~gG~~~~~g~~ 1092 (1389)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ..+.+|+++.|. ++|++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 456899999994 57999999975
No 203
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=349.52 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=177.1
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1389)
...+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999987 9999999999865432 247999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
+++.+||+||+.|+....+... .+ ....++.+++.+||++..++.+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------~~------------------------~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------EE------------------------RREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999998754322110 00 0113566889999998888888
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
.+ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..++|+|++.|++ .++.+++|+|+
T Consensus 163 ~~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~-~~~~~~~Dri~ 236 (400)
T PRK10070 163 DE-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDL-DEAMRIGDRIA 236 (400)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCH-HHHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999998765577877776654 58889999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000615 416 LLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999998874
No 204
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.2e-35 Score=378.52 Aligned_cols=205 Identities=28% Similarity=0.400 Sum_probs=171.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++++..+ ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46999999999999999999999999999999999999997 9999999999987754 578999999999986 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++.. . +.++..+++...+. +.. .-.|++..||.+|+ .+
T Consensus 542 TI~eNi~~~~~-~-------------------------~~e~i~~al~~a~l------~~~--i~~lp~G~dt~ige-~G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L-------------------------TLDEAWEAARMAGL------AED--IRAMPMGMHTVISE-GG 586 (686)
T ss_pred cHHHHHhcCCC-C-------------------------CHHHHHHHHHHcCc------HHH--HHhccccccccccC-CC
Confidence 99999988532 0 11112222222211 111 12467889999996 46
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
..||||||||++||||++++|++|+||||||+||+.++.++.+.|+++ ++|+|+..|++ ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999875 46888887766 677889999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 205
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=340.46 Aligned_cols=218 Identities=22% Similarity=0.338 Sum_probs=176.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CcCceEEEecCCCC-
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDL- 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 255 (1389)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 89999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 334 (1389)
.+...||+||+.|+.+..+.. .. +....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------EE------------------------DAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCChhhhhCC
Confidence 333579999999864322110 00 0112356788999997 567877
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+. .++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~-~~~~~~~drv 216 (290)
T PRK13634 143 PFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSM-EDAARYADQI 216 (290)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEE
Confidence 766 9999999999999999999999999999999999999999999999775577877776654 5888999999
Q ss_pred EEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000615 415 ILLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~---~F~~lG~~~p~ 444 (1389)
++|++|+++++|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999988742 23344544443
No 206
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.1e-35 Score=332.95 Aligned_cols=202 Identities=25% Similarity=0.332 Sum_probs=171.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----------------hhhhheee
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----------------ETFARVSG 943 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----------------~~~~~~~g 943 (1389)
+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4699999999999999999999999999999999997653 47999999986531 13456799
Q ss_pred EeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000615 944 YCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVA 1023 (1389)
Q Consensus 944 yv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~ 1023 (1389)
|++|++.+++..|+.||+.+...... .......++.++++++.+++.+..+.. +..||||||||++||++|+.
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~ 163 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVL--GMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALAM 163 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHHc
Confidence 99999999999999999987542211 123344456688999999998777665 45799999999999999999
Q ss_pred CCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1024 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1024 ~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++...+|++++|.+ |++++.|+.
T Consensus 164 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 164 RPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999998765 899999999986 56678999999985 899988874
No 207
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.4e-35 Score=329.63 Aligned_cols=205 Identities=24% Similarity=0.374 Sum_probs=173.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999887 8999999998754332 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.+.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 133 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------KK----------E--------------REEKLEELLEEFHITHLRKSKASS-- 133 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhCChhh--
Confidence 99999998753221100 00 0 011346688899998888888766
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 134 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~~-~~~~~~~d~i~~l~~ 208 (232)
T cd03218 134 ---LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITDHNV-RETLSITDRAYIIYE 208 (232)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876 467777776655 488899999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999988763
No 208
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=330.63 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=177.3
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 56777765442 2469999999999999999999999999999999999765 34799999998642
Q ss_pred ---------hhhhhheeeEeccCCCCCCCCCHHHHHHHHH-HhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000615 935 ---------QETFARVSGYCEQNDIHSPYVTVYESLLYSA-WLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGV 1004 (1389)
Q Consensus 935 ---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~-~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 1004 (1389)
....++.++|++|++.+++.+||.||+.+.. ... .....+..+.+.++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 1234567999999999999999999997532 221 1223334456889999999987777653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 56678999999985 8
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99988874
No 209
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=331.66 Aligned_cols=206 Identities=28% Similarity=0.407 Sum_probs=172.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 46999999999999999999999999999999999999887 8999999998764332 35799999999999999
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc--cccccccCc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--CADTMVGDE 338 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~--~~dt~vg~~ 338 (1389)
||+||+.++.+..+.. .. + ....++.+++.+||++ ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWP----------KE----------K--------------IRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 9999998754322110 00 0 0113456788999985 56666655
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~-~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDI-DEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999765467777777665 47789999999999
Q ss_pred CCeEEEecChhHHH
Q 000615 419 EGQIVYQGPRDNVL 432 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1389)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999988764
No 210
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.3e-35 Score=329.16 Aligned_cols=195 Identities=24% Similarity=0.348 Sum_probs=163.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 36999999999999999999999999999999999999887 899999999875432 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.++.+..+.. .. +....++.+++.+||++..++.+++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP----------PR------------------------DANERVSAALEKVGLEGKAHALPMQ 138 (216)
T ss_pred ccccHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChhh
Confidence 9999999998864322110 00 0012356678899998888888766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|
T Consensus 139 -----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~-~~~~~~~d~i~~l 211 (216)
T TIGR00960 139 -----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVATHDI-NLVETYRHRTLTL 211 (216)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999865 367777766654 5777899999999
Q ss_pred cCCeE
Q 000615 418 SEGQI 422 (1389)
Q Consensus 418 ~~G~i 422 (1389)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 211
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=336.73 Aligned_cols=200 Identities=23% Similarity=0.324 Sum_probs=170.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCCC-CCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDI-HSPY 954 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 954 (1389)
+.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 459999999999999999999999999999999999765 347999999987632 234567999999975 3567
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
.|+.||+.|..... ..+.++..+.++++++.++|.+..+..+ ..||||||||++||+||+.+|+||||||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998765332 2234444566899999999988777663 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+|||+.++..+++.|+++.++|+|||++||+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~ 219 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEP 219 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999976 44 67999999985 899999885
No 212
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=338.05 Aligned_cols=218 Identities=24% Similarity=0.318 Sum_probs=177.3
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++.. ....+.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~--------~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPG--------TPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCC--------CCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 5677777654210 00014599999999999999999999999999999999997653 4899999998753
Q ss_pred h-------hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000615 935 Q-------ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1389)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1389)
. ...++.+||++|++. .+..+||.||+.|..... ....++..++++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 1 234567999999973 233589999998765332 223344556789999999996 566665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.||++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999976 57788999999985 89
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13641 223 LIKHASP 229 (287)
T ss_pred EEEeCCH
Confidence 9998875
No 213
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.3e-35 Score=328.28 Aligned_cols=203 Identities=29% Similarity=0.410 Sum_probs=171.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999887 999999999875421 2356999999999998999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+..+..+... . + ....++.+++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK----------S----------E--------------IKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999987543322100 0 0 011346678899998888888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTTHSM-DEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEcCCH-HHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999865 46777776665 47778999999999999
Q ss_pred EEEecChhHH
Q 000615 422 IVYQGPRDNV 431 (1389)
Q Consensus 422 iv~~G~~~~~ 431 (1389)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999998764
No 214
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.5e-35 Score=333.17 Aligned_cols=213 Identities=26% Similarity=0.350 Sum_probs=172.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 46999999999999999999999999999999999999887 899999999876432 245799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.++...... ... .+ .+..+ . .....++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~--~~~---~~------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP--TWR---SL------LGRFS-E--------------EDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhccccccc--chh---hh------hcccc-H--------------HHHHHHHHHHHHcCcHhhhcCCccc
Confidence 999999999875321100 000 00 00000 0 0112356678899998877777765
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~-~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQV-DLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776655 4778899999999
Q ss_pred cCCeEEEecChhHH
Q 000615 418 SEGQIVYQGPRDNV 431 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~ 431 (1389)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998775
No 215
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.2e-35 Score=338.89 Aligned_cols=237 Identities=25% Similarity=0.399 Sum_probs=199.2
Q ss_pred hhhcCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceEeeeeEEEEeCCeEEEEEcC
Q 000615 126 TDRVGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGP 205 (1389)
Q Consensus 126 ~~~~~~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp 205 (1389)
.+++.++-|+-.+..|++++- +...++++|+|+||.+.+|+.++|+||
T Consensus 323 ~~~m~LP~P~g~L~Ve~l~~~--------------------------------PPg~~~pil~~isF~l~~G~~lgIIGP 370 (580)
T COG4618 323 AERMPLPAPQGALSVERLTAA--------------------------------PPGQKKPILKGISFALQAGEALGIIGP 370 (580)
T ss_pred cCCCCCCCCCceeeEeeeeec--------------------------------CCCCCCcceecceeEecCCceEEEECC
Confidence 345667777888888888872 112346799999999999999999999
Q ss_pred CCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC---ceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHH
Q 000615 206 PGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELL 282 (1389)
Q Consensus 206 ~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~ 282 (1389)
||||||||.++|.|..+|. +|.|.+||-+++.+.+. +.+||.||+-.+|+ .||.|||. |+
T Consensus 371 SgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf---------- 433 (580)
T COG4618 371 SGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RF---------- 433 (580)
T ss_pred CCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hc----------
Confidence 9999999999999999986 99999999999887653 78999999988886 59999993 21
Q ss_pred HHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCc
Q 000615 283 AELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTAN 362 (1389)
Q Consensus 283 ~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~ 362 (1389)
.++.|.+...+|+..++. .|. ++.|++.+||.||+ .+.+||||||||+++||||+++|.
T Consensus 434 ------------~~~~d~~kIieAA~lAgv-----Hel---Il~lP~GYdT~iG~-~G~~LSgGQRQRIaLARAlYG~P~ 492 (580)
T COG4618 434 ------------GEEADPEKVIEAARLAGV-----HEL---ILRLPQGYDTRIGE-GGATLSGGQRQRIALARALYGDPF 492 (580)
T ss_pred ------------cccCCHHHHHHHHHHcCh-----HHH---HHhCcCCccCccCC-CCCCCCchHHHHHHHHHHHcCCCc
Confidence 123344556666666553 233 46699999999997 467799999999999999999999
Q ss_pred EeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHH
Q 000615 363 VLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFF 435 (1389)
Q Consensus 363 illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~F 435 (1389)
+++||||-|+||+.....+.+.+.+... .|+|+|+..|.| .+...+|+|++|++|++-.+|+++|++...
T Consensus 493 lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvviaHRP--s~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 493 LVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIAHRP--SALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEecCH--HHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 9999999999999999999999999865 577888877765 688999999999999999999999998754
No 216
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=330.70 Aligned_cols=212 Identities=23% Similarity=0.339 Sum_probs=175.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 367788876542 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Chh----hhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000615 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELV-ELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LS 1008 (1389)
... ..++.++|++|++.+++.+||.||+.+..... ..++..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 24567999999999999999999998754221 1122334567778877 466555544 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|.+ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999976 67889999999985 89999
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9875
No 217
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=333.21 Aligned_cols=218 Identities=22% Similarity=0.239 Sum_probs=177.8
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 367778776442 3469999999999999999999999999999999999755 3479999999875
Q ss_pred Ch---hh-hhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-------C-----CCcHHHHHHHHHHHHHHcCCcccccc
Q 000615 934 NQ---ET-FARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-------S-----DVDTKKRKMFVDEVMELVELKSLNDS 997 (1389)
Q Consensus 934 ~~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-------~-----~~~~~~~~~~v~~~l~~l~L~~~~~~ 997 (1389)
.. .. .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 42 12 233589999999999999999999886431100 0 00112233567889999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCe
Q 000615 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1076 (1389)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 1076 (1389)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 53 579999999999999999999999999999999999999999999999775 899999999976 57788999
Q ss_pred EEEEecCcEEEEecCCC
Q 000615 1077 LLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1077 ~l~l~~gG~~~~~g~~~ 1093 (1389)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999984 8999988753
No 218
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=336.09 Aligned_cols=204 Identities=26% Similarity=0.329 Sum_probs=170.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 259 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 35999999999999999999999999999999999999887 9999999998865432 357999999963 4556
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
.||+||+.|+....+.. +. .....++.+++.+||++..++.+.+
T Consensus 95 ~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~-- 138 (274)
T PRK13647 95 STVWDDVAFGPVNMGLD----------KD------------------------EVERRVEEALKAVRMWDFRDKPPYH-- 138 (274)
T ss_pred CcHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHHHhcCChhh--
Confidence 89999998864321110 00 0012356788999999888888876
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|++++.|+ ..++.+++|+|++|++
T Consensus 139 ---LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g~tili~tH~-~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 139 ---LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-GKTVIVATHD-VDLAAEWADQVIVLKE 213 (274)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998764 6777777665 4577789999999999
Q ss_pred CeEEEecChhHH
Q 000615 420 GQIVYQGPRDNV 431 (1389)
Q Consensus 420 G~iv~~G~~~~~ 431 (1389)
|++++.|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998754
No 219
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-35 Score=330.85 Aligned_cols=216 Identities=24% Similarity=0.292 Sum_probs=176.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcCc
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISGY 931 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g~ 931 (1389)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 56777765442 24699999999999999999999999999999999997542 135899999998
Q ss_pred cCCh---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc----ccccccCCCC
Q 000615 932 PKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGLPGV 1004 (1389)
Q Consensus 932 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~~~~ 1004 (1389)
++.. ...++.+||++|++.+++.+||.||+.+....+.. ....++..+.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7532 34566799999999888999999999886543211 11223445568899999998542 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
..||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999864 899999999976 56778999999974 8
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99988874
No 220
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.9e-35 Score=326.97 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=170.1
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999765 34799999998754322 256999999999899999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
|+.+....+. .. ...+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 234788999999988777653 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
.++..+++.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|++.
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999877999999999986 57788999999975 8999998864
No 221
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.4e-35 Score=326.49 Aligned_cols=203 Identities=25% Similarity=0.392 Sum_probs=169.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 46999999999999999999999999999999999999887 8999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHh-CCcccccccccCc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVGDE 338 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~l-gL~~~~dt~vg~~ 338 (1389)
+||+||+.+.....+ . .+ ....++.+++.+ +|++..++.+++
T Consensus 90 ~t~~~~l~~~~~~~~-~---------------------~~--------------~~~~~~~~l~~~~~l~~~~~~~~~~- 132 (222)
T cd03224 90 LTVEENLLLGAYARR-R---------------------AK--------------RKARLERVYELFPRLKERRKQLAGT- 132 (222)
T ss_pred CcHHHHHHHHhhhcC-c---------------------hh--------------HHHHHHHHHHHHHhhhhhhhCchhh-
Confidence 999999988643211 0 00 001233456666 477767777766
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|+
T Consensus 133 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~ 206 (222)
T cd03224 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVEQNA-RFALEIADRAYVLE 206 (222)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhccEEEEee
Confidence 999999999999999999999999999999999999999999999876 467777776654 57889999999999
Q ss_pred CCeEEEecChhHHH
Q 000615 419 EGQIVYQGPRDNVL 432 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1389)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987763
No 222
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.3e-35 Score=327.85 Aligned_cols=195 Identities=26% Similarity=0.392 Sum_probs=164.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999887 9999999998765431 3579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
++.+||+||+.++....+.. .. .....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------KK------------------------ERRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhcChh
Confidence 99999999998864332110 00 001135668889999888888876
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHh-hhcEEEE
Confidence 6 99999999999999999999999999999999999999999999997644678888877764 454 9999999
Q ss_pred EcCCeE
Q 000615 417 LSEGQI 422 (1389)
Q Consensus 417 L~~G~i 422 (1389)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 223
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.1e-35 Score=329.96 Aligned_cols=207 Identities=23% Similarity=0.272 Sum_probs=167.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhh-hheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETF-ARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~-~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+... ... +..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 46999999999999999999999999999999999973111357999999987542 122 23489999999999999
Q ss_pred CHHHHHHHHHHhhcCC----CCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 956 TVYESLLYSAWLRLSS----DVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
|++|++.+........ ....++..+.++++++.++|. +..+..++ ..|||||||||+||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998764322110 112233345688999999997 45555432 24999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hCeEEEEecCcEEEEecCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||||+|||+.++..+.+.|+++.++|+|||++||+++ .+... +|++++|. +|++++.|+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~-~G~i~~~g~~ 229 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLL-DGRIVKSGDV 229 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEe-CCEEEEecCH
Confidence 9999999999999999999999877899999999976 45555 79999997 5899988874
No 224
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=331.32 Aligned_cols=217 Identities=25% Similarity=0.300 Sum_probs=177.0
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367788876542 246999999999999999999999999999999999976532 2479999999
Q ss_pred ccCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....++..+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8753 123456799999999999999999999886543211 1122334456788999999853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999976 5677899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 225
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=331.13 Aligned_cols=215 Identities=23% Similarity=0.296 Sum_probs=175.0
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 478888876542 245999999999999999999999999999999999975431 2479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1389)
.++.. ...++.++|++|++.+++ +||+||+.+....... ......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 235677999999988775 8999999886543211 12233455688899998873 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|.
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999996 4799999999986 5678899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+|+++..|+.
T Consensus 224 -~G~i~~~g~~ 233 (254)
T PRK14273 224 -NGCIEEESST 233 (254)
T ss_pred -CCEEEEeCCH
Confidence 4899988874
No 226
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-35 Score=331.47 Aligned_cols=214 Identities=26% Similarity=0.331 Sum_probs=175.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 577888876432 24699999999999999999999999999999999997542 12589999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ..+++.++|++|++.+++ +|++||+.+....+ ....++.++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 234567999999988887 89999998865432 1223344456888999998842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..|||||||||+|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|.
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999976 5667899999997
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+|++++.|+.
T Consensus 228 -~G~i~~~~~~ 237 (258)
T PRK14268 228 -MGELIEFGQT 237 (258)
T ss_pred -CCEEEEeCCH
Confidence 4899998875
No 227
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=5e-35 Score=345.35 Aligned_cols=208 Identities=23% Similarity=0.301 Sum_probs=177.1
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCe----eCCCCCc-------CceEEEe
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGH----ELNEFVP-------QRTCAYI 250 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv 250 (1389)
....+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+ ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999987 999999996 3333221 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccc
Q 000615 251 SQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC 330 (1389)
Q Consensus 251 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~ 330 (1389)
+|++.+++.+||+||+.|+....+... .+ ....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------~~------------------------~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------AE------------------------RRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 00 01235678899999988
Q ss_pred ccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhh
Q 000615 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1389)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 410 (1389)
.|+.+++ |||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+..+.|+|++.|+ ..++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHd-l~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHD-LDEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHh
Confidence 8888876 999999999999999999999999999999999999999999999977557777777665 4588899
Q ss_pred cCeEEEEcCCeEEEecChhHHH
Q 000615 411 FDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 411 ~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 228
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-35 Score=334.87 Aligned_cols=214 Identities=23% Similarity=0.363 Sum_probs=178.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++ ++..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 56777776542 12359999999999999999999999999999999999765 35899999998753
Q ss_pred h---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
. ...++.+||++|++. .+...||.||+.+..... ....+..++.++++++.++|.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 345567999999974 334679999998765322 2334444567899999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999986 57788999999985 899999
Q ss_pred cCC
Q 000615 1090 GPL 1092 (1389)
Q Consensus 1090 g~~ 1092 (1389)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 875
No 229
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-35 Score=303.30 Aligned_cols=208 Identities=29% Similarity=0.444 Sum_probs=173.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcC---ceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 260 (1389)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++.+||++++.+.+. +.-+..+|+..+-...
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999987 99999999999888653 5668999998887778
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+|-+.++..-.+.+.. |. +...+++..|...++.+.+.+..-
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~R~y~---- 134 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAGRDYR---- 134 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhccchh----
Confidence 999999998654322210 00 012235667778888877766553
Q ss_pred cCCChhHhhHHHHHHHHhc------CCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 341 RGISGGQKKRVTTGEMLVG------TANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~------~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
.|||||||||.+||.|+. ++++||||||||+||...+..+++..|++++. +. .++.++|..+-+..++|+|
T Consensus 135 -~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~-~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 135 -TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GG-AVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred -hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CC-cEEEEEccchHHHHhhhee
Confidence 499999999999999973 45699999999999999999999999999985 44 4555566777888999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1389)
++|++|+++..|++++++.
T Consensus 212 vll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 212 VLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeeCCeEeecCCHHHhcC
Confidence 9999999999999999863
No 230
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=338.28 Aligned_cols=216 Identities=21% Similarity=0.366 Sum_probs=173.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------------------CcC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------------------VPQ 244 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------------------~~~ 244 (1389)
.++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999987 99999999887542 124
Q ss_pred ceEEEecCCC--CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHH
Q 000615 245 RTCAYISQHD--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVL 322 (1389)
Q Consensus 245 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl 322 (1389)
+.++||+|++ .+++ .||+||+.|+....+.. .. +....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK----------KS------------------------EAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC----------HH------------------------HHHHHHHHHH
Confidence 6799999986 4554 59999998864321110 00 0011346678
Q ss_pred HHhCCc-ccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEe
Q 000615 323 KILGLD-ICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALL 401 (1389)
Q Consensus 323 ~~lgL~-~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~ 401 (1389)
+.+||+ +..++.+.+ |||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+ .+.|+|++.|
T Consensus 161 ~~~gL~~~~~~~~~~~-----LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TiiivtH 234 (320)
T PRK13631 161 NKMGLDDSYLERSPFG-----LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVITH 234 (320)
T ss_pred HHcCCChhHhcCCccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEec
Confidence 899997 456666654 999999999999999999999999999999999999999999999875 4678777766
Q ss_pred cCcchHHhhcCeEEEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000615 402 QPAPETYDLFDDIILLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1389)
Q Consensus 402 q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~---~F~~lG~~~p~ 444 (1389)
++ .++.+++|+|++|++|++++.|+++++.. .++..|..+|.
T Consensus 235 d~-~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TM-EHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CH-HHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 54 46778999999999999999999998742 34455555544
No 231
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-35 Score=331.88 Aligned_cols=213 Identities=28% Similarity=0.395 Sum_probs=176.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56677765442 3469999999999999999999999999999999999755 34799999998653
Q ss_pred h---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+++.+..+..+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 234567999999998888899999998754221 1112233456889999999987777764 4799999
Q ss_pred HHHHHHHHHHh------hCCCCceeeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1012 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1012 rqRl~ia~aL~------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
||||+||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||++||++. ++.+.+|++++|.+ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 67899999999976 56778999999985 7
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 89888875
No 232
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=348.25 Aligned_cols=202 Identities=22% Similarity=0.289 Sum_probs=173.7
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hh----hhheeeEeccCCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET----FARVSGYCEQNDIH 951 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~~~ 951 (1389)
...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.. .. .++.+||++|++.+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 34589999999999999999999999999999999997653 47999999987542 11 13469999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 952 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
++.+||+||+.|....+. ...++..+++.++++.++|.+..++. +..|||||||||+|||||+.+|+|||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 22344556789999999998877776 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999875 4899999999976 57788999999985 899988875
No 233
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-35 Score=323.91 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=166.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999999887 9999999987754 2356799999999999999999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
||+.+.....+.. . .+ ....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 129 (210)
T cd03269 89 DQLVYLAQLKGLK----------K----------EE--------------ARRRIDEWLERLELSEYANKRVEE-----L 129 (210)
T ss_pred HHHHHHHHHcCCC----------h----------HH--------------HHHHHHHHHHHcCChHHHhCcHhh-----C
Confidence 9998754322110 0 00 012356678899998888887766 9
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEE
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv 423 (1389)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~-~~tii~~sH~~-~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA-GKTVILSTHQM-ELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEECCCH-HHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998753 66777766654 4788899999999999998
Q ss_pred Eec
Q 000615 424 YQG 426 (1389)
Q Consensus 424 ~~G 426 (1389)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 234
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=326.25 Aligned_cols=201 Identities=19% Similarity=0.289 Sum_probs=168.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998865432 2469999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
++.+||+||+.+.....+.. .. +....++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------PA------------------------EINSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh
Confidence 99999999998864321100 00 001235668889999887787776
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
+ |||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++. ++.. +|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~~~-~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LAKR-MSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHh-hCEEEE
Confidence 5 99999999999999999999999999999999999999999999987645678888777664 4544 689999
Q ss_pred EcCCeEEEecCh
Q 000615 417 LSEGQIVYQGPR 428 (1389)
Q Consensus 417 L~~G~iv~~G~~ 428 (1389)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 235
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-35 Score=334.67 Aligned_cols=214 Identities=26% Similarity=0.321 Sum_probs=178.9
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 677887765421 124599999999999999999999999999999999997653 4899999998764
Q ss_pred h---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
. ...++.+||++|++. .++..||.||+.+..... ..+.++..+.+.++++.++|.+..+..+ ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 3 234567999999974 667789999998865432 2233444567899999999988877764 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|.+ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999976 34 46999999984 899999
Q ss_pred cCC
Q 000615 1090 GPL 1092 (1389)
Q Consensus 1090 g~~ 1092 (1389)
|+.
T Consensus 222 g~~ 224 (279)
T PRK13635 222 GTP 224 (279)
T ss_pred CCH
Confidence 875
No 236
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=334.12 Aligned_cols=201 Identities=25% Similarity=0.370 Sum_probs=169.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hhhhheeeEeccCCCC-CC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH-SP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~-~~ 953 (1389)
+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.. ..
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 459999999999999999999999999999999999765 347999999987531 2345679999999753 34
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
..|+.||+.+....+ ....++..+.++++++.+++.+..++. +..||||||||++||++|+.+|+||+||||
T Consensus 92 ~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~laraL~~~p~lllLDEP 163 (271)
T PRK13638 92 YTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLSHGQKKRVAIAGALVLQARYLLLDEP 163 (271)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 568999998764332 122334445688999999998877765 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 164 TAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999877999999999976 56678999999985 899998875
No 237
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.3e-35 Score=326.95 Aligned_cols=204 Identities=23% Similarity=0.346 Sum_probs=167.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCc-----CCCCCceeEEEECCeeCCCCC-----cCceEEEecCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL-----GKDLRASGKITYCGHELNEFV-----PQRTCAYISQH 253 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 253 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999998 665 899999999875432 24579999999
Q ss_pred CCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccc
Q 000615 254 DLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1389)
Q Consensus 254 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 333 (1389)
+.++ .+||+||+.++.+..+... . + +....++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~---------~-----------~-------------~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL---------K-----------E-------------ELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc---------H-----------H-------------HHHHHHHHHHHHcCCChHHhc
Confidence 8888 7999999988643221100 0 0 001234567889999877666
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+. .+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .|+|++.|++ .++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~sH~~-~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIVTHNM-QQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEEeccH-HHHHHhCCE
Confidence 540 1349999999999999999999999999999999999999999999998763 6777766654 578889999
Q ss_pred EEEEcCCeEEEecChhH
Q 000615 414 IILLSEGQIVYQGPRDN 430 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~ 430 (1389)
|++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998765
No 238
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7e-35 Score=346.76 Aligned_cols=209 Identities=25% Similarity=0.408 Sum_probs=176.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999987 9999999998876432 46799999999998899
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+||+.++...... ++.. .. ......+++.++.+||.+..|+.+.+
T Consensus 93 tv~e~v~~~~~~~~~--~~~~--------------~~--------------~~~~~~v~~~le~vgl~~~~~~~~~~--- 139 (402)
T PRK09536 93 DVRQVVEMGRTPHRS--RFDT--------------WT--------------ETDRAAVERAMERTGVAQFADRPVTS--- 139 (402)
T ss_pred CHHHHHHhccchhcc--cccC--------------CC--------------HHHHHHHHHHHHHcCCchhhcCChhh---
Confidence 999999885321100 0000 00 00122467789999999888888876
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|+ ..++.++||++++|++|
T Consensus 140 --LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIivsHd-l~~~~~~adrii~l~~G 215 (402)
T PRK09536 140 --LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAAIHD-LDLAARYCDELVLLADG 215 (402)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEECC-HHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999986 46777776654 56888999999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
++++.|++++++
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999999864
No 239
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.1e-35 Score=336.01 Aligned_cols=204 Identities=20% Similarity=0.204 Sum_probs=150.6
Q ss_pred CCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000615 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1389)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1389)
.|..+.+.++++.++. +..+++.+++..++.-...+++|+||+||||+++++.|..++ ..|-+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc
Confidence 4556777777754431 122689999999999999999999999999999999996542 356555443
Q ss_pred ccCChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCH
Q 000615 931 YPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSg 1009 (1389)
+.+++|..|...-+-.+.|.+- .+-...+. .... +.+.+-+..+||.. ++... +.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~p--G~~~----ee~r~hl~~~Gl~g~la~~s-----i~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSFP--GKTE----EEIRRHLGSFGLSGELALQS-----IASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhCC--CCCH----HHHHHHHHhcCCCchhhhcc-----ccccCC
Confidence 4568999997665545555442 23233332 2222 33677888999864 22222 468999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
|||-||++|.....+|.+|+|||||+.||-.+-..+.++|++. +..||++||+.+ -+-..|+++.+..+|...-..
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ie 561 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIE 561 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeee
Confidence 9999999999999999999999999999999999999999886 567999999966 366789999999864433344
Q ss_pred cC
Q 000615 1090 GP 1091 (1389)
Q Consensus 1090 g~ 1091 (1389)
|.
T Consensus 562 g~ 563 (582)
T KOG0062|consen 562 GG 563 (582)
T ss_pred cc
Confidence 43
No 240
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.10 Aligned_cols=216 Identities=21% Similarity=0.301 Sum_probs=176.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 931 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~ 931 (1389)
++++|+++.++ .+.+|+|+|++|++||++||+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~ 71 (258)
T PRK14241 5 IDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGE 71 (258)
T ss_pred EEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCE
Confidence 67778776542 246999999999999999999999999999999999975421 25899999998
Q ss_pred cCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000615 932 PKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLP 1002 (1389)
Q Consensus 932 ~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~ 1002 (1389)
+.. ....++.++|++|++.+++.+||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (258)
T PRK14241 72 DLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP---- 145 (258)
T ss_pred eccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC----
Confidence 753 12345679999999999999999999988654331 1123344556889999999842 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe-
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK- 1081 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~- 1081 (1389)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 146 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~~ 222 (258)
T PRK14241 146 -GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFNL 222 (258)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEec
Confidence 457999999999999999999999999999999999999999999999864 689999999976 5778899999997
Q ss_pred ----cCcEEEEecCC
Q 000615 1082 ----RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ----~gG~~~~~g~~ 1092 (1389)
+.|++++.|+.
T Consensus 223 ~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 223 EATGKPGRLVEIDDT 237 (258)
T ss_pred ccCCCCceEEecCCH
Confidence 25899998875
No 241
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.1e-35 Score=322.48 Aligned_cols=192 Identities=28% Similarity=0.342 Sum_probs=161.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCC-CCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDL-HHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 262 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999887 9999999998754333467999999974 3456899
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+.....+ . ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~----------------------~----------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELD----------------------A----------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcC----------------------c----------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 999987532110 0 011246678899999888888876
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sH~~-~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVITHDY-EFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875 367877777665 477789999999999997
Q ss_pred E
Q 000615 423 V 423 (1389)
Q Consensus 423 v 423 (1389)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 242
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=332.29 Aligned_cols=216 Identities=25% Similarity=0.378 Sum_probs=177.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 259 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999987 9999999998865432 357999999973 6667
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
.||.||+.++.+..+.. .. + ....++++++.+||++..++.+++
T Consensus 97 ~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------RE----------E--------------MVERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhCCccc--
Confidence 89999998864322110 00 0 012357788999999888888876
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HHH-cCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755778888877764 554 5999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 000615 420 GQIVYQGPRDNVLE---FFEHMGFKCP 443 (1389)
Q Consensus 420 G~iv~~G~~~~~~~---~F~~lG~~~p 443 (1389)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3444454443
No 243
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.4e-35 Score=331.86 Aligned_cols=220 Identities=29% Similarity=0.381 Sum_probs=178.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1389)
-++++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTF-------------NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEe-------------CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 36777777544 2356999999999999999999999999999999999976532 136999999986
Q ss_pred CCh--------hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-----CCCcHHHHHHHHHHHHHHcCCcccccccc
Q 000615 933 KNQ--------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-----SDVDTKKRKMFVDEVMELVELKSLNDSMV 999 (1389)
Q Consensus 933 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~ 999 (1389)
... ...++.++|++|++.+++.+||.||+.+......+ .....++...+++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 23356799999999999999999999875321000 01112234456899999999987777653
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEE
Q 000615 1000 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1078 (1389)
Q Consensus 1000 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l 1078 (1389)
..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999754 899999999976 4778899999
Q ss_pred EEecCcEEEEecCCC
Q 000615 1079 LLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1079 ~l~~gG~~~~~g~~~ 1093 (1389)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7899988864
No 244
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-35 Score=322.74 Aligned_cols=194 Identities=26% Similarity=0.355 Sum_probs=163.5
Q ss_pred cceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCCCHHHHHHH
Q 000615 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLY 963 (1389)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f 963 (1389)
|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||+||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999765 347999999987532 1234679999999999999999999987
Q ss_pred HHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000615 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1389)
Q Consensus 964 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1389)
....+. .. .+..++.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1233456889999999988777663 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1044 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1044 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
.+++.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998754 899999999976 56678999999985 7877653
No 245
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9e-35 Score=328.31 Aligned_cols=203 Identities=26% Similarity=0.341 Sum_probs=169.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh----hhhheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 4699999999999999999999999999999999997653 479999999865321 1234699999999999999
Q ss_pred CHHHHHHHHHHhhcC-----CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 956 TVYESLLYSAWLRLS-----SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
||+||+.+....... .....+..++.++++++.+++.+..+..+ +.||||||||++||++|+.+|++|+|
T Consensus 93 tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~lll 167 (242)
T TIGR03411 93 TVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLLLL 167 (242)
T ss_pred CHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 999999885432110 00112234456899999999987776653 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|.+ |+++..|+.
T Consensus 168 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 168 DEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred cCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 999999999999999999999875 799999999976 57778999999985 888888874
No 246
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.9e-35 Score=344.14 Aligned_cols=205 Identities=22% Similarity=0.323 Sum_probs=175.6
Q ss_pred cccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCc----cCC---hhh---hh-heeeEe
Q 000615 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY----PKN---QET---FA-RVSGYC 945 (1389)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~----~~~---~~~---~~-~~~gyv 945 (1389)
++...+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|. +.. ... ++ +.++||
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 345679999999999999999999999999999999999765 34799999995 221 111 22 469999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000615 946 EQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANP 1025 (1389)
Q Consensus 946 ~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p 1025 (1389)
+|++.++|.+||+||+.|....+ .....+..+.+.++++.++|.+..+..+ ..||||||||++|||+|+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999875443 2334555677899999999988877764 479999999999999999999
Q ss_pred CCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1026 SIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1026 ~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999999999765 899999999986 57789999999985 8999999863
No 247
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=334.24 Aligned_cols=205 Identities=20% Similarity=0.299 Sum_probs=170.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------cCceEEEecCCC--
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHD-- 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 254 (1389)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 899999999885421 245799999986
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 333 (1389)
.+++ .||.||+.|+....+.. .. +....++.+++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------LD------------------------EVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhhhhC
Confidence 3454 59999998864321110 00 0112356678899997 67777
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+..+.|++++.|+. .++.+++|+
T Consensus 142 ~~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~-~~~~~~~dr 215 (286)
T PRK13646 142 SPFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDM-NEVARYADE 215 (286)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH-HHHHHhCCE
Confidence 7765 9999999999999999999999999999999999999999999999765567777776654 478889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999998864
No 248
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-35 Score=331.16 Aligned_cols=217 Identities=27% Similarity=0.366 Sum_probs=177.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+ +++.+|+|||+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGY-------------GTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEE-------------CCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 5667766543 23469999999999999999999999999999999999754 34799999998653
Q ss_pred h---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
. ...++.++|++|++.+++.+|+.||+.+....... .....+...+.++++++.+++.+..+.. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23456799999999888889999999875211000 0111123345678999999998777765 3579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998877999999999986 67789999999985 7898888
Q ss_pred CCC
Q 000615 1091 PLG 1093 (1389)
Q Consensus 1091 ~~~ 1093 (1389)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 754
No 249
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.7e-34 Score=323.22 Aligned_cols=173 Identities=25% Similarity=0.321 Sum_probs=135.2
Q ss_pred eecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHHHHH
Q 000615 883 LHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLL 962 (1389)
Q Consensus 883 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 962 (1389)
|+==.++|..||+++++||||-||||+.++|||...+ .+|. . ..-.++|=||--.--...||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~-------~~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----E-------EDLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----C-------ccceEeecceeecCCCCCcHHHHHH
Confidence 3334568899999999999999999999999996553 2443 1 0123678888655556789999775
Q ss_pred HHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHH
Q 000615 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1042 (1389)
Q Consensus 963 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~ 1042 (1389)
-...-+... .-...++++-++|.++.++.+ .+|||||.|||+||.+|.++.+|.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432211111 123467888999999988875 48999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1043 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1043 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
..+-+.||+...+ ++|.+++-||..+ +--..|++++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998754 7899999999763 555678888775
No 250
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.3e-34 Score=331.50 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=173.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 45999999999999999999999999999999999999887 899999999876432 135699999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||.||+.+....... ....+ ....++.+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPAPL------------------------LHSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCHHH------------------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 999999999875321100 00000 011245678899999888888876
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~-~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDV-PEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhhCEEEEE
Confidence 9999999999999999999999999999999999999999999998765467777776654 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 251
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.6e-35 Score=379.02 Aligned_cols=206 Identities=25% Similarity=0.324 Sum_probs=171.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 45999999999999999999999999999999999999997 9999999999877653 578999999999885 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++.. +.+.++..+++...+. +.. .-.|++..||.+|+ .+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~l------~~~--i~~lp~gl~t~i~e-~G 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAAI------HDV--ITSRPGGYDAELAE-GG 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhCC------HHH--HHhCcCcccceecc-CC
Confidence 99999987421 1111222222222211 111 12477889999996 46
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
++||||||||++||||++++|+||+||||||+||+.++.++.+.|++ .++|+|+..|++ ++...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~IiitHrl--~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVAHRL--STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999986 368888888776 567889999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 252
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.5e-34 Score=325.10 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=172.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc--CceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP--QRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 261 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999887 9999999998754322 247999999998888999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+.....+.. ..+ ....++.+++.+||++..++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------RAE------------------------ARERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhcCChhh----
Confidence 999998754321100 000 011245678889999888888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EIE-ADDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hHh-hCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999987645678877777664 554 599999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887753
No 253
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=6.6e-35 Score=321.68 Aligned_cols=195 Identities=29% Similarity=0.418 Sum_probs=166.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-CcCceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-VPQRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 262 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999887 99999999876542 123579999999999999999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+.....+. ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999875321110 011245678889998888887776
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISSHLL-SEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCH-HHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876 467777776654 477789999999999999
Q ss_pred EEec
Q 000615 423 VYQG 426 (1389)
Q Consensus 423 v~~G 426 (1389)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 254
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-35 Score=332.04 Aligned_cols=218 Identities=29% Similarity=0.388 Sum_probs=178.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..++ ++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 467888776442 2469999999999999999999999999999999999765 3479999999764
Q ss_pred C---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
. ...+++.++|++|++.+++.+|+.||+.+....... ........++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 3 234456799999998888999999999875321110 00111223456889999999987767664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999976 57788999999984 88998
Q ss_pred ecCCC
Q 000615 1089 AGPLG 1093 (1389)
Q Consensus 1089 ~g~~~ 1093 (1389)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 255
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=331.85 Aligned_cols=219 Identities=23% Similarity=0.298 Sum_probs=180.0
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEE
Confidence 3577888876552 24699999999999999999999999999999999997653 47999999987
Q ss_pred CCh---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000615 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1389)
... ...++.++|++|++.+++.+|++|++.+...-..+ .....+..++.++++++.++|.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCC
Confidence 532 33456799999999998999999999875211100 0001123345688999999998777765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|. +|+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~ 223 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALR-EGKIV 223 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 5788999999998 48999
Q ss_pred EecCCC
Q 000615 1088 YAGPLG 1093 (1389)
Q Consensus 1088 ~~g~~~ 1093 (1389)
+.|+..
T Consensus 224 ~~g~~~ 229 (265)
T PRK10253 224 AQGAPK 229 (265)
T ss_pred EeCCHH
Confidence 988853
No 256
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.6e-35 Score=324.45 Aligned_cols=204 Identities=34% Similarity=0.517 Sum_probs=169.9
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC---CCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG---KDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGE 259 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 259 (1389)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ ++ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 65 89999999987643345789999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHH-HHHHhCCcccccccccCc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDY-VLKILGLDICADTMVGDE 338 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-vl~~lgL~~~~dt~vg~~ 338 (1389)
+||+||+.|+......... . .+. .....+. .++.+++++..++.+++
T Consensus 96 ~tv~enl~~~~~~~~~~~~-----------------~-~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~- 143 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS-----------------S-DAI-------------RKKRVEDVLLRDLALTRIGGNLVKG- 143 (226)
T ss_pred CcHHHHHHHHHHhhccccc-----------------c-hHH-------------HHHHHHHHHHHhhcchhhhcccccC-
Confidence 9999999986443211000 0 000 0011233 77888888777777765
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. +.|++++.|++..++.+++|++++|+
T Consensus 144 ----LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 144 ----ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ----cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998753 77888888887668999999999999
Q ss_pred CCeEEEec
Q 000615 419 EGQIVYQG 426 (1389)
Q Consensus 419 ~G~iv~~G 426 (1389)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 257
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=9.8e-35 Score=375.58 Aligned_cols=208 Identities=25% Similarity=0.435 Sum_probs=174.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999997 9999999999987654 578999999999886 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++.. +.+.++..+++...+. +.. .-.|++..||.+|+ .+
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~l------~~~--i~~lp~gl~T~i~e-~G 599 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAGV------TEF--VRRHPDGLDMQIGE-RG 599 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcCh------HHH--HHhCcccccceecC-CC
Confidence 99999987521 1112222333332221 111 12478899999996 46
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
..||||||||++||||++.+|++++||||||+||+.++.++.+.|+++.+ ++|+|+..|++ ++.+.||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~iiItHrl--~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVLVTHRT--SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999998764 67888888876 567899999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++|+++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999875
No 258
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=327.78 Aligned_cols=221 Identities=25% Similarity=0.357 Sum_probs=175.5
Q ss_pred CceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEEE
Q 000615 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKI 928 (1389)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i 928 (1389)
|..++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34578888887552 2459999999999999999999999999999999999632 1 124799999
Q ss_pred cCccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000615 929 SGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1389)
Q Consensus 929 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1389)
+|.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+...+.++++++.+++.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987532 234567999999998887 5999999886543211 1223334568889999998542111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~- 223 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM- 223 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999985 4799999999976 56788999999985
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|+++..|+.
T Consensus 224 G~i~~~g~~ 232 (253)
T PRK14242 224 GKLIEVGPT 232 (253)
T ss_pred CEEEEeCCH
Confidence 889888864
No 259
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=368.55 Aligned_cols=209 Identities=23% Similarity=0.365 Sum_probs=172.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999997 8999999999887653 468999999999886 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++... +.+.++..+++...+. +..+ -.|++..||.+|+. +
T Consensus 432 Ti~~Ni~~~~~~------------------------~~~~~~i~~al~~~~l------~~~i--~~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE------------------------QYSREQIEEAARMAYA------MDFI--NKMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC------------------------CCCHHHHHHHHHHhCc------HHHH--HhcccccCceeCCC-C
Confidence 999999875210 0011122222221111 1122 23788899999973 5
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++.+ ++|+|+..|++ +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~VtHr~--~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHRL--STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 67888888776 677889999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999864
No 260
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-35 Score=347.48 Aligned_cols=214 Identities=27% Similarity=0.463 Sum_probs=180.4
Q ss_pred CCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000615 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1389)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1389)
.+..++.+|++|.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 455677778887654 223799999999999999999999999999999999998763 489999999
Q ss_pred ccC---ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccc------cccC
Q 000615 931 YPK---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS------MVGL 1001 (1389)
Q Consensus 931 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~------~~g~ 1001 (1389)
.+. +...+++.++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 864 55778999999999998876 49999998753 1222 3347889999998776554 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+.++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4568999999999999999999999999999999999999999999999986 599999999964 667899999998
Q ss_pred cCcEEEEecCCC
Q 000615 1082 RGGRVIYAGPLG 1093 (1389)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1389)
+ |++++.|...
T Consensus 529 ~-G~l~~~g~~~ 539 (559)
T COG4988 529 N-GRLVEQGTHE 539 (559)
T ss_pred C-CceeccCCHH
Confidence 5 8999999753
No 261
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.39 Aligned_cols=217 Identities=24% Similarity=0.355 Sum_probs=174.7
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~--------~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAG--------TPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCC--------CccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 5677777655210 00013599999999999999999999999999999999997653 4799999998753
Q ss_pred h-------hhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000615 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1389)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1389)
. ...++.++|++|++ .+++ .||+||+.+..... ....++..+.++++++.++|. ...+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 69999998764332 122334455678999999996 345554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999976 56678999999985 8
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 89888875
No 262
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1e-34 Score=374.75 Aligned_cols=206 Identities=25% Similarity=0.376 Sum_probs=168.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999997 9999999999887654 478999999999886 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++... .+.++..+++...+. +..++ .|++..||.+|+ .+
T Consensus 570 TIreNI~~g~~~-------------------------~~~e~i~~al~~a~l------~~~i~--~lp~GldT~ige-~G 615 (711)
T TIGR00958 570 SVRENIAYGLTD-------------------------TPDEEIMAAAKAANA------HDFIM--EFPNGYDTEVGE-KG 615 (711)
T ss_pred CHHHHHhcCCCC-------------------------CCHHHHHHHHHHcCC------HHHHH--hCCCccCCcccC-CC
Confidence 999999886321 011122222222211 11122 367889999996 35
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
..||||||||++||||++++|+|++||||||+||+.+...+.+ ... ..++|+|+..|++ ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIiItHrl--~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLLIAHRL--STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEEEeccH--HHHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999998888 222 2467888888776 567889999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++|+++
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999875
No 263
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=328.93 Aligned_cols=218 Identities=21% Similarity=0.287 Sum_probs=177.2
Q ss_pred CCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEE
Q 000615 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIK 927 (1389)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~ 927 (1389)
....++++|+++.++ +..+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 344678889887552 2359999999999999999999999999999999999753 1 13579999
Q ss_pred EcCccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccc
Q 000615 928 ISGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSM 998 (1389)
Q Consensus 928 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 998 (1389)
++|.+... ..+++.++|++|++.+++ .||+||+.+...... ..+.++.+++++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987531 235677999999988877 899999987653321 1233344456889999999843 23333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEE
Q 000615 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1389)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l 1078 (1389)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999986 4789999999976 5667899999
Q ss_pred EEecCcEEEEecCC
Q 000615 1079 LLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1389)
+|.+ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 899988874
No 264
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.7e-34 Score=337.82 Aligned_cols=209 Identities=21% Similarity=0.283 Sum_probs=173.2
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCC--
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHD-- 254 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 254 (1389)
..++|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|+++..... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999886 9999999999865432 35799999997
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 333 (1389)
.+++.+||.||+.+..+....+ +.+.+ ....++.+++.+||. +..++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~~~------------------------~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSRQE------------------------VKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCHHH------------------------HHHHHHHHHHHcCCChHHhcC
Confidence 5788999999998754321100 00000 112346678899994 45677
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+.+ |||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+..+.|++++.| ....+.+++|+
T Consensus 158 ~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTH-dl~~~~~~~dr 231 (331)
T PRK15079 158 YPHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAH-DLAVVKHISDR 231 (331)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhCCE
Confidence 7665 99999999999999999999999999999999999999999999997755667666554 55688889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998875
No 265
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2e-34 Score=322.47 Aligned_cols=213 Identities=25% Similarity=0.376 Sum_probs=173.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 46788887654310 0013599999999999999999999999999999999997653 479999999875
Q ss_pred Chh---h---h-hheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000615 934 NQE---T---F-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1389)
Q Consensus 934 ~~~---~---~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1389)
... . . ++.++|++|++.+++.+|+.||+.+....+. ....+..+++.++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 321 1 1 2569999999999999999999987654321 223344567899999999987776653 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|.+ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999976 34 56999999985 77
Q ss_pred EEE
Q 000615 1086 VIY 1088 (1389)
Q Consensus 1086 ~~~ 1088 (1389)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 764
No 266
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-35 Score=297.52 Aligned_cols=201 Identities=27% Similarity=0.423 Sum_probs=177.3
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
..+|+|||++|.+||.+.++||||||||||||+++|..++ ..|.|.+||+++....- ..|.|+|++.++|.+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 4599999999999999999999999999999999998774 57999999998764332 2489999999999999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
|+.|+..++ .+++.++.+.+.+.+..+||.+..+..+ -.||||||||+.|||||..+|+.|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 4667888899999999999999887764 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhCeEEEEec-CcEEEEecCCC
Q 000615 1040 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPLG 1093 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~l~l~~-gG~~~~~g~~~ 1093 (1389)
-+++.++++|-++. ++|+.++++||+.. |..-.++++++|+. .|+++..-|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999998886 45999999999976 55557899999974 36788776653
No 267
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-34 Score=326.65 Aligned_cols=205 Identities=20% Similarity=0.330 Sum_probs=171.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-----cCceEEEecCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDLHHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 258 (1389)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 46999999999999999999999999999999999999887 999999999876421 2457999999999998
Q ss_pred CCCHHHHHHHhhhc-cCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 259 EMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
.+||+||+.++... .+.. .. +....++.+++.+||++..|..+.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~ 136 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------KE------------------------EAEKQARELLAKVGLAERAHHYPSE 136 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChHHHhcChhh
Confidence 99999999875321 1000 00 0012346688899998777877765
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|++ .++.+++|++++|
T Consensus 137 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l 209 (240)
T PRK09493 137 -----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVTHEI-GFAEKVASRLIFI 209 (240)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999875 367777776655 4788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 268
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=326.18 Aligned_cols=219 Identities=21% Similarity=0.310 Sum_probs=173.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCC---CCceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~g~~~G~i~i~g 930 (1389)
.++++|+++.++ .+.+|+|||+++++||+++|+||||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 456777775442 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+...+.++++++.+++.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988877 5999999876543311 1122344568899999998642211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999986 57788999999984 89
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999875
No 269
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-34 Score=367.36 Aligned_cols=206 Identities=24% Similarity=0.331 Sum_probs=172.1
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1389)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999997 8999999999987654 5789999999999975 9
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
++|||.++.. . .++++ .+++...+ .+..++ .|++..||.+|+ .+.
T Consensus 431 i~~NI~~~~~---~--------------------~d~~i---~~a~~~~g------l~~~i~--~lp~Gldt~i~e-~g~ 475 (592)
T PRK10790 431 FLANVTLGRD---I--------------------SEEQV---WQALETVQ------LAELAR--SLPDGLYTPLGE-QGN 475 (592)
T ss_pred HHHHHHhCCC---C--------------------CHHHH---HHHHHHcC------cHHHHH--hccccccccccC-CCC
Confidence 9999988621 0 01111 11221111 111222 267889999997 456
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
.||||||||++|||||+++|+|++||||||+||+.++..|.+.|+++.. ++|+|+..|++ +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998754 57888888876 6677899999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
++..|+++++++
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 270
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-34 Score=329.96 Aligned_cols=223 Identities=22% Similarity=0.312 Sum_probs=177.2
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++.....+ ..+++.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56777776553110000 0113569999999999999999999999999999999999765 34799999998754
Q ss_pred hh------hhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000615 935 QE------TFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1389)
Q Consensus 935 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1389)
.. ..++.++|++|++ .+.+.+||+|++.+...... ........+.+.++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 2356799999997 46678999999976543211 122233445688999999995 556655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|. +|
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~-~G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMD-KG 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEe-CC
Confidence 79999999999999999999999999999999999999999999999765 899999999976 5667899999998 58
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99998875
No 271
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=8.8e-35 Score=325.33 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=166.3
Q ss_pred eecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHHHHH
Q 000615 883 LHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLL 962 (1389)
Q Consensus 883 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 962 (1389)
|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999765 34799999998764321 12489999999999999999998
Q ss_pred HHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHH
Q 000615 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1042 (1389)
Q Consensus 963 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~ 1042 (1389)
+....... ....++..+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2233444556889999999987777653 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1043 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1043 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57788999999985 888887764
No 272
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=316.57 Aligned_cols=196 Identities=33% Similarity=0.607 Sum_probs=162.2
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1389)
.++|+|++|.++.+ .+++.+|+|+|+++++||++||+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999987532 13457999999999999999999999999999999999975522 458999999987
Q ss_pred CCh--hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 933 KNQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 933 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 543 235667999999999999999999998754211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|.+ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 677777766543367788999999985 788765
Q ss_pred c
Q 000615 1090 G 1090 (1389)
Q Consensus 1090 g 1090 (1389)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 273
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=336.84 Aligned_cols=226 Identities=23% Similarity=0.258 Sum_probs=181.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~--~-~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL--F-KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc--c-ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 46788888766421100 0 001235799999999999999999999999999999999997653 479999999875
Q ss_pred Ch------hhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000615 934 NQ------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGV 1004 (1389)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~ 1004 (1389)
.. ..+++.++||+|++ .+.|.+||.+++.+..... .....++..+++.++++.++|.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 23456799999998 5889999999987654332 12334455677899999999963 44554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
..||||||||++||+||+.+|+||++||||+|||..++..|+++|+++.++ |.|||++||+++ .+.+.+|++++|. .
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~-~ 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMY-L 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-C
Confidence 589999999999999999999999999999999999999999999999764 999999999976 4667899999998 4
Q ss_pred cEEEEecCCC
Q 000615 1084 GRVIYAGPLG 1093 (1389)
Q Consensus 1084 G~~~~~g~~~ 1093 (1389)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 8999999853
No 274
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=331.28 Aligned_cols=214 Identities=26% Similarity=0.350 Sum_probs=176.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+. +++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 45677766542 12359999999999999999999999999999999999765 34799999998753
Q ss_pred h-----hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000615 935 Q-----ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1389)
. ...++.++|++|++. .+...||.||+.+..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 234567999999973 334579999998754321 1233444566889999999988877764 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|+++ ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999976 56778999999985 89999
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 275
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-35 Score=319.34 Aligned_cols=222 Identities=25% Similarity=0.344 Sum_probs=194.8
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1389)
..--++|+|++|+.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999997 9999999999876653 367999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
++|+.||.||..|+.+.+|.+.. | .+.+..+.|+..||+...+..+
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------e------------------------r~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------E------------------------REERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------H------------------------HHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999999887521 1 1223567899999999999998
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
.+ ||||+||||.+||||+.+|+||+||||+|+|||--+.++.+.|.++.+.+++|+|+ +.|...|.+++.|+|.
T Consensus 163 ~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvF-itHDLdEAlriG~rIa 236 (386)
T COG4175 163 NE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVF-ITHDLDEALRIGDRIA 236 (386)
T ss_pred cc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEE-EecCHHHHHhccceEE
Confidence 77 99999999999999999999999999999999999999999999998877777665 4567889999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHhh
Q 000615 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEV 455 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~adfl~~v 455 (1389)
+|.+|+||..|+++|++. .|.+.-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 35555566666654
No 276
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.3e-34 Score=329.54 Aligned_cols=205 Identities=31% Similarity=0.415 Sum_probs=170.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhhheeeEeccCCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 469999999999999999999999999999999999765 347999999987532 234556999999988788899
Q ss_pred HHHHHHHHHH-hhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000615 957 VYESLLYSAW-LRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1389)
Q Consensus 957 v~E~l~f~~~-lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1389)
|.||+.+... .+........+..+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+
T Consensus 92 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 166 (256)
T TIGR03873 92 VRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEPTN 166 (256)
T ss_pred HHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCccc
Confidence 9999987531 110000111233456889999999987777763 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 167 ~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 167 HLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 99999999999999999877899999999987 57788999999985 7899888753
No 277
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.1e-34 Score=375.77 Aligned_cols=208 Identities=28% Similarity=0.380 Sum_probs=172.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|++||+++++... ++.++||+|++.+|+ .
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-G 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-H
Confidence 35899999999999999999999999999999999999997 9999999999877654 578999999999886 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+|||.++.+. +.+.++..+++..++. +.. .-.|++.+||.+|+ .+
T Consensus 563 TI~eNi~l~~~~------------------------~~~~~~i~~a~~~a~l------~~~--i~~lp~gldt~i~e-~G 609 (708)
T TIGR01193 563 SILENLLLGAKE------------------------NVSQDEIWAACEIAEI------KDD--IENMPLGYQTELSE-EG 609 (708)
T ss_pred HHHHHHhccCCC------------------------CCCHHHHHHHHHHhCC------HHH--HHhcccccCcEecC-CC
Confidence 999999885211 1111222233322221 111 12478889999986 46
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
..||||||||++||||++++|++|+||||||+||+.++..+.+.|+++ .++|+|+..|.+ ++.+.+|+|++|++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~IiitHr~--~~~~~~D~i~~l~~G 684 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIFVAHRL--SVAKQSDKIIVLDHG 684 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEEEecch--HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999874 367888887776 567899999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
++++.|+++++++
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999865
No 278
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.6e-34 Score=324.42 Aligned_cols=201 Identities=31% Similarity=0.444 Sum_probs=168.5
Q ss_pred ccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEec-cCCCCCCC
Q 000615 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCE-QNDIHSPY 954 (1389)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 954 (1389)
+.+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 45679999999999999999999999999999999999765 347999999976422 23456799997 55677788
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+||+|++.+...++ ....++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998865433 1223344456788999999988777764 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 56788999999985 7887654
No 279
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=315.15 Aligned_cols=183 Identities=45% Similarity=0.745 Sum_probs=156.6
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGE 259 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 259 (1389)
.++.+|+|+|+++++|++++|+||||||||||+++|+|.+++....+|+|.++|+++.... .++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 3457999999999999999999999999999999999999831123999999999876542 34679999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++.+.. .++.+.
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~~~~~~--- 117 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------GNEFVR--- 117 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------cccchh---
Confidence 99999997742100 223333
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.||+..++.+.+|++++|++
T Consensus 118 --~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 118 --GISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred --hCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 499999999999999999999999999999999999999999999987654677888888887889999999999999
Q ss_pred CeEEEec
Q 000615 420 GQIVYQG 426 (1389)
Q Consensus 420 G~iv~~G 426 (1389)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 280
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=335.95 Aligned_cols=220 Identities=19% Similarity=0.266 Sum_probs=178.1
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC-Cc-eEEEEEEEcCcc
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GG-YIEGDIKISGYP 932 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~g-~~~G~i~i~g~~ 932 (1389)
++++|++..++.. .+...+|+||||+|++||++||+|+||||||||+++|+|... ++ ..+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 5778877655321 112469999999999999999999999999999999999754 22 357999999987
Q ss_pred CCh---hhhh----heeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc---cccccc
Q 000615 933 KNQ---ETFA----RVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL---NDSMVG 1000 (1389)
Q Consensus 933 ~~~---~~~~----~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~~g 1000 (1389)
+.. ...+ +.++|++|++ .+.|.+|+.+++........ ....++.++++.++++.++|.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 542 2222 3699999998 47889999998876543321 22345556778999999999753 2333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEE
Q 000615 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLL 1079 (1389)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~ 1079 (1389)
+..|||||||||+||+||+.+|+||++||||+|||+.++..+++.|+++.+ .|.|||++||+++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 458999999999999999999999999999999999999999999999976 4899999999976 46678999999
Q ss_pred EecCcEEEEecCC
Q 000615 1080 LKRGGRVIYAGPL 1092 (1389)
Q Consensus 1080 l~~gG~~~~~g~~ 1092 (1389)
|. +|++++.|+.
T Consensus 227 m~-~G~ive~g~~ 238 (326)
T PRK11022 227 MY-AGQVVETGKA 238 (326)
T ss_pred EE-CCEEEEECCH
Confidence 98 5899999985
No 281
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.2e-34 Score=319.30 Aligned_cols=189 Identities=24% Similarity=0.359 Sum_probs=161.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---h----hhhhheeeEeccCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---Q----ETFARVSGYCEQNDIHS 952 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 952 (1389)
+.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999765 34799999998742 1 12456799999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1389)
+.+|++||+.+....+ .....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 2223444567889999999987777763 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1033 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998877999999999975 45679998764
No 282
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-34 Score=322.79 Aligned_cols=201 Identities=27% Similarity=0.401 Sum_probs=171.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhhheeeEeccCCCCCCCCCHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
+.+|+|+|++++|||+++|+|+||||||||+++|+|...+ ..|+|.++|.+.... ..++.++|++|++..++.+|+.
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4699999999999999999999999999999999997653 479999999876431 2346799999999998899999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+....+. .......+.++++++.+++.+..+.. +..||+|||||++||++|+.+|++++|||||+|||
T Consensus 91 ~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD 162 (232)
T cd03300 91 ENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALD 162 (232)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 22333445688999999998877766 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 163 LKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999998764 899999999976 57788999999985 889888763
No 283
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.21 Aligned_cols=207 Identities=29% Similarity=0.365 Sum_probs=172.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCC--C---CcCceEEEecCCCC-CC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE--F---VPQRTCAYISQHDL-HH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 257 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999887 9999999998742 1 12357999999973 34
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
...||+||+.++....+.. ..+ ....++.+++.+||.+..|+.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------EDE------------------------VRKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCChhhhhCCccc
Confidence 4679999998854321110 000 012356788999999888888776
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|+. .++.++||++++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~-~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDI-DIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999875567777776654 4677899999999
Q ss_pred cCCeEEEecChhHHHH
Q 000615 418 SEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1389)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988754
No 284
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.4e-34 Score=323.12 Aligned_cols=202 Identities=24% Similarity=0.320 Sum_probs=167.9
Q ss_pred ccceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEec-CCCCCCC
Q 000615 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYIS-QHDLHHG 258 (1389)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~-Q~d~~~~ 258 (1389)
..+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|++..... .++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4467999999999999999999999999999999999999887 999999998754321 245799997 5567778
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
.+||+||+.+.....+.. .. + ....++.+++.+||++..|+.+++
T Consensus 109 ~~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~- 153 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLP----------PA----------R--------------FKKRLDELSELLDLEELLDTPVRQ- 153 (236)
T ss_pred CCcHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhHhcCChhh-
Confidence 899999998754322110 00 0 011245678889999988998876
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|+
T Consensus 154 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~-~~~~~~~d~i~~l~ 228 (236)
T cd03267 154 ----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYM-KDIEALARRVLVID 228 (236)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCH-HHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998765567877777665 47788999999999
Q ss_pred CCeEEEec
Q 000615 419 EGQIVYQG 426 (1389)
Q Consensus 419 ~G~iv~~G 426 (1389)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 285
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.9e-33 Score=363.11 Aligned_cols=209 Identities=28% Similarity=0.356 Sum_probs=176.9
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|++|.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 36899999988741 124699999999999999999999999999999999998663 48999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1389)
+. ...+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 4668889999999999876 49999998752 1 22 23477888888887543 5556643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999886 589999999975 5678999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999984
No 286
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.6e-35 Score=322.84 Aligned_cols=198 Identities=31% Similarity=0.452 Sum_probs=167.2
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCCH
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 262 (1389)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999887 999999999876421 24679999999999998999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------GD------------------------ELTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998753321110 00 0112356788999999888888776
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++ .++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFSTHIM-QEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 367777777665 578889999999999999
Q ss_pred EEec
Q 000615 423 VYQG 426 (1389)
Q Consensus 423 v~~G 426 (1389)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 287
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-34 Score=363.89 Aligned_cols=207 Identities=26% Similarity=0.428 Sum_probs=170.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 35899999999999999999999999999999999999997 9999999999887654 467999999998886 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++||+.++.. +.+.++..+++...+. +..+ -. ++++||.+|+. +
T Consensus 429 ti~~Ni~~~~~-------------------------~~~~~~i~~al~~~~l------~~~i--~~-p~GldT~vge~-g 473 (574)
T PRK11160 429 TLRDNLLLAAP-------------------------NASDEALIEVLQQVGL------EKLL--ED-DKGLNAWLGEG-G 473 (574)
T ss_pred cHHHHhhcCCC-------------------------ccCHHHHHHHHHHcCC------HHHH--cC-ccccCchhcCC-C
Confidence 99999988531 0011111222221111 1111 23 67889999973 5
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
+.||||||||++||||++++|++|+|||||++||+.++..+.+.|+++.+ ++|+|++.|++ +....+|+|++|++|
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tviiitHr~--~~~~~~d~i~~l~~G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLMITHRL--TGLEQFDRICVMDNG 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEEEecCh--hHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999998753 68888888876 455779999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
++++.|+++|+++
T Consensus 550 ~i~~~g~~~~l~~ 562 (574)
T PRK11160 550 QIIEQGTHQELLA 562 (574)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999999864
No 288
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-35 Score=340.11 Aligned_cols=209 Identities=25% Similarity=0.396 Sum_probs=171.8
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1389)
+.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.+++++|...+|.
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~- 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLFS- 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHHH-
Confidence 347999999999999999999999999999999999999998 9999999999877655 468999999877775
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
.|+|+||.++. |+...++..++....+- +.. ..+.++..||.+|+ .
T Consensus 426 ~Tlr~NL~lA~-------------------------~~AsDEel~~aL~qvgL------~~l--~~~~p~gl~t~lge-~ 471 (573)
T COG4987 426 GTLRDNLRLAN-------------------------PDASDEELWAALQQVGL------EKL--LESAPDGLNTWLGE-G 471 (573)
T ss_pred HHHHHHHhhcC-------------------------CCCCHHHHHHHHHHcCH------HHH--HHhChhhhhchhcc-C
Confidence 69999998863 22222222222221110 111 12345688999996 6
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
+++||||||||++|||+|++|+++++|||||.|||+.|..++++.|.+-++ ++|+++..|+-. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kTll~vTHrL~--~le~~drIivl~~ 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKTLLMVTHRLR--GLERMDRIIVLDN 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCeEEEEecccc--cHhhcCEEEEEEC
Confidence 788999999999999999999999999999999999999999999988654 789988887654 4578999999999
Q ss_pred CeEEEecChhHHHH
Q 000615 420 GQIVYQGPRDNVLE 433 (1389)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1389)
|+++++|++.+++.
T Consensus 548 Gkiie~G~~~~Ll~ 561 (573)
T COG4987 548 GKIIEEGTHAELLA 561 (573)
T ss_pred CeeeecCCHHhhhc
Confidence 99999999999874
No 289
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=313.66 Aligned_cols=190 Identities=59% Similarity=0.963 Sum_probs=159.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 36778887765311 012469999999999999999999999999999999999642223589999999876
Q ss_pred ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000615 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1389)
. ...++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 445677999999999999999999998743110 49999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++.+.+|++++|.++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998644678899999998548888765
No 290
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=330.48 Aligned_cols=215 Identities=26% Similarity=0.359 Sum_probs=178.1
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ .+++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~-----------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYP-----------NSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcC-----------CCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 478888876542 0124699999999999999999999999999999999997653 479999999876
Q ss_pred Ch---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++....++++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 42 345677999999974 567789999998764322 1223344556899999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..+|++++|.+ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 599999999986 34 57999999985 88988
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 291
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.7e-35 Score=321.86 Aligned_cols=195 Identities=25% Similarity=0.367 Sum_probs=163.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 999999999876532 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.+.....+.. .. +....++.+++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------PR------------------------EIRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999998864322110 00 0011346678889998888887766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tiiivtH~~-~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA-GTTVVVATHAK-ELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 67777776665 5777899999999
Q ss_pred cCCeE
Q 000615 418 SEGQI 422 (1389)
Q Consensus 418 ~~G~i 422 (1389)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 292
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=328.51 Aligned_cols=205 Identities=26% Similarity=0.332 Sum_probs=171.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999887 899999999886432 2467999999974 5677
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++....+.. .. +....++.+++.+||++..++.+++
T Consensus 99 ~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------PK------------------------KMKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHhhCCccc--
Confidence 89999998753321100 00 0012356788899999888888866
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ ..+|++++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987644578888887764 45 47999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 293
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=335.53 Aligned_cols=205 Identities=23% Similarity=0.357 Sum_probs=168.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC----------------------
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF---------------------- 241 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~---------------------- 241 (1389)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 89999998764210
Q ss_pred -----CcCceEEEecCCC-CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchh
Q 000615 242 -----VPQRTCAYISQHD-LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETS 315 (1389)
Q Consensus 242 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~ 315 (1389)
..++.+|||+|++ ..+...||+||+.|+....+.. +. + ..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------~~----------~--------------~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------KE----------E--------------AK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------HH----------H--------------HH
Confidence 1245799999985 3444679999999865432211 00 0 11
Q ss_pred hhHHHHHHHhCCc-ccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCC
Q 000615 316 LVTDYVLKILGLD-ICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDV 394 (1389)
Q Consensus 316 ~~~~~vl~~lgL~-~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~ 394 (1389)
..++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~ 216 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGK 216 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCC
Confidence 2356788999996 667877766 999999999999999999999999999999999999999999999875 467
Q ss_pred eEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHH
Q 000615 395 TMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 395 t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
|+|++.|+ ..++.+++|+|++|++|++++.|+++++.
T Consensus 217 tiiivtHd-~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 217 TIILVTHD-LDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEEEeeC-HHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 77776654 45788999999999999999999998874
No 294
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=328.02 Aligned_cols=216 Identities=23% Similarity=0.291 Sum_probs=175.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 578888887542 24699999999999999999999999999999999996542 12579999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 1001 (1389)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. .....+..+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87532 2346679999999888875 999999886543311 11223334568899999999642 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|.
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 789999999976 5667899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 4 899988874
No 295
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-34 Score=319.36 Aligned_cols=198 Identities=24% Similarity=0.306 Sum_probs=166.9
Q ss_pred eeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCCCHHHH
Q 000615 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1389)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1389)
+++|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 46799999999999999999999999999999997653 47999999987532 2345679999999999999999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHH
Q 000615 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1389)
Q Consensus 961 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1040 (1389)
+.+...... .. ..+.++.++++++.+++.+..++. +..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987542211 11 122345678899999998777776 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecC
Q 000615 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1389)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~ 1091 (1389)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|. +|+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~-~g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVS-QGKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEE-CCeEEEecC
Confidence 999999999998764 899999999976 5667899999997 589888774
No 296
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-34 Score=336.11 Aligned_cols=225 Identities=20% Similarity=0.282 Sum_probs=180.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1389)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47788887655321 12356999999999999999999999999999999999976431 237999999987
Q ss_pred CCh---hhh---h-heeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000615 933 KNQ---ETF---A-RVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1389)
Q Consensus 933 ~~~---~~~---~-~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1389)
+.. ..+ + +.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 642 222 2 4699999998 67899999999977654332 233445556789999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
+..||||||||++||+||+.+|+||++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~- 236 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY- 236 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 5689999999999999999999999999999999999999999999999765 899999999976 4667899999997
Q ss_pred CcEEEEecCCC
Q 000615 1083 GGRVIYAGPLG 1093 (1389)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1389)
+|++++.|+..
T Consensus 237 ~G~ive~g~~~ 247 (330)
T PRK09473 237 AGRTMEYGNAR 247 (330)
T ss_pred CCEEEEECCHH
Confidence 58999999853
No 297
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=332.07 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=178.8
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-IEGDIKISGYP 932 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~-~~G~i~i~g~~ 932 (1389)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4678888765421 12359999999999999999999999999999999999754321 13899999987
Q ss_pred CCh---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000615 933 KNQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1389)
... ...++.+||++|++. .++..||.||+.|..... ....++.++.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 567899999998764322 233445556789999999998877766 45899
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++ +.||++++|. +|+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~-~G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLD-DGKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999765 899999999976 34 6799999997 48999
Q ss_pred EecCC
Q 000615 1088 YAGPL 1092 (1389)
Q Consensus 1088 ~~g~~ 1092 (1389)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99875
No 298
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-34 Score=324.95 Aligned_cols=199 Identities=28% Similarity=0.353 Sum_probs=165.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---h-hhhheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E-TFARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~-~~~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+... . ..++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 469999999999999999999999999999999999765 347999999987532 1 1345799999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE-LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
|+.||+.+....+. .. ..+.++++++.++ +.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt 159 (230)
T TIGR03410 91 TVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPT 159 (230)
T ss_pred cHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 99999987654321 11 1223567777776 45555554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|+++++.+ |++++.|+..
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 217 (230)
T TIGR03410 160 EGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGD 217 (230)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999998864 899999999976 56668999999974 8999988864
No 299
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=329.50 Aligned_cols=207 Identities=27% Similarity=0.384 Sum_probs=169.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc------eEEEEEEEcCccCCh---hhhhheeeEeccCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YIEGDIKISGYPKNQ---ETFARVSGYCEQNDI 950 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~ 950 (1389)
+.+|+|||++|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ...++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 46999999999999999999999999999999999975431 127999999987532 334567899999987
Q ss_pred CCCCCCHHHHHHHHHHhhc-CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh-------
Q 000615 951 HSPYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV------- 1022 (1389)
Q Consensus 951 ~~~~lTv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~------- 1022 (1389)
.++.+||+||+.+...... ......++..+.++++++.+++.+..+.. +..|||||||||+||++|+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~~~~~ 168 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLWPPHD 168 (272)
T ss_pred CCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhccccccc
Confidence 6677999999987532111 00111123345688999999998776665 3579999999999999999
Q ss_pred --hCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1023 --ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1023 --~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+..
T Consensus 169 ~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 169 AAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred cCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999998765 899999999986 56678999999985 8999988753
No 300
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.2e-34 Score=326.80 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=171.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-----------CcCceEEEecC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----------VPQRTCAYISQ 252 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q 252 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35999999999999999999999999999999999999886 89999999987532 12357999999
Q ss_pred CCCCCCCCCHHHHHHHhhhc-cCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccc
Q 000615 253 HDLHHGEMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA 331 (1389)
Q Consensus 253 ~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~ 331 (1389)
++.+++.+||+||+.++... .+.. . . .....++.+++.+||++..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGEP----------K----------E--------------EATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCCC----------H----------H--------------HHHHHHHHHHHHcCCcchh
Confidence 99999899999999875321 1000 0 0 0012345678889998877
Q ss_pred cccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhc
Q 000615 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1389)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 411 (1389)
|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. +.|+|++.|+ ..++.+++
T Consensus 139 ~~~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~tvi~~tH~-~~~~~~~~ 211 (250)
T PRK11264 139 TSYPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE-KRTMVIVTHE-MSFARDVA 211 (250)
T ss_pred hCChhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc-CCEEEEEeCC-HHHHHHhc
Confidence 877766 9999999999999999999999999999999999999999999998753 6777776655 45788899
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000615 412 DDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 412 D~iilL~~G~iv~~G~~~~~~ 432 (1389)
|+|++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988764
No 301
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=359.93 Aligned_cols=221 Identities=23% Similarity=0.309 Sum_probs=183.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTF-------------GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEe-------------CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 36778887654 23469999999999999999999999999999999999765433589999999876
Q ss_pred Chh----hhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
... ..++.+|||+|++.+++.+||+||+.+....+.......++..+.++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 124569999999999999999999988653321111123344456899999999987777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||++||+++ ++.+.||++++|.+ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999976 56778999999985 899999
Q ss_pred cCCCc
Q 000615 1090 GPLGH 1094 (1389)
Q Consensus 1090 g~~~~ 1094 (1389)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88754
No 302
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=327.04 Aligned_cols=224 Identities=21% Similarity=0.273 Sum_probs=179.5
Q ss_pred ccCCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEE
Q 000615 849 PFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGD 925 (1389)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~ 925 (1389)
|..+..++++|+++.++ .+.+|+|||+++++||++||+|+||||||||+++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445688999887552 24699999999999999999999999999999999997542 135799
Q ss_pred EEEcCccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccccccccc
Q 000615 926 IKISGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG 1000 (1389)
Q Consensus 926 i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g 1000 (1389)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... . ....+..++.+.++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 234567999999988877 59999998864321 1 11233445668889999998542222222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 1 246899999999999999999999999999999999999999999999985 4799999999986 577889999999
Q ss_pred ecCcEEEEecCC
Q 000615 1081 KRGGRVIYAGPL 1092 (1389)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1389)
. +|++++.|+.
T Consensus 236 ~-~G~i~~~g~~ 246 (267)
T PRK14237 236 Y-LGDLIEYDKT 246 (267)
T ss_pred E-CCEEEEeCCH
Confidence 8 5899999885
No 303
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=328.78 Aligned_cols=216 Identities=25% Similarity=0.308 Sum_probs=178.8
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788888765421 12358999999999999999999999999999999999765 3479999999875
Q ss_pred Ch---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.. ...++.++|++|++. +++..|+.+|+.+..... ....++..+.++++++.+++.+..+.. +..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 32 345677999999985 677889999998864322 123344455688999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|.+ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 454 4999999985 89999
Q ss_pred ecCCC
Q 000615 1089 AGPLG 1093 (1389)
Q Consensus 1089 ~g~~~ 1093 (1389)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 88753
No 304
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=331.43 Aligned_cols=218 Identities=22% Similarity=0.291 Sum_probs=178.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++... ....+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecc
Confidence 67888877653100 0012469999999999999999999999999999999999765 34799999998764
Q ss_pred h----hhhhheeeEeccCCCC-CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 935 Q----ETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
. ...++.+||++|++.. +...||.|++.|..... .....+.++.++++++.++|.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 2 2346779999999742 33469999998875432 2233445567899999999988877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++ ..+|++++|++ |++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~-~~~d~v~~l~~-G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EA-VEADRIIVMDS-GKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HH-hcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 999999999986 34 45999999985 89999
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 225 ~g~~ 228 (280)
T PRK13633 225 EGTP 228 (280)
T ss_pred ecCH
Confidence 8875
No 305
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=4.6e-33 Score=357.26 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=100.8
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCCce
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1029 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~---~p~ill 1029 (1389)
.+||.|.+.|...+. .. ....++++.+||... .+.. ...||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467888877765432 11 124678899999753 3444 45799999999999999997 599999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe-----cCcEEEEecCC
Q 000615 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPL 1092 (1389)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~-----~gG~~~~~g~~ 1092 (1389)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ..+.+|+++.|. ++|++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446799999994 57999999875
No 306
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=332.82 Aligned_cols=219 Identities=20% Similarity=0.310 Sum_probs=175.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 467888877653100 0013599999999999999999999999999999999997653 479999999865
Q ss_pred C--------hhhhhheeeEeccCCCC-CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000615 934 N--------QETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPG 1003 (1389)
Q Consensus 934 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~ 1003 (1389)
. ....++.++|++|++.. ....||+||+.|..... ....++..+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22469999998864321 122334445678899999994 566655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|.+
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999976 57788999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 899988874
No 307
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.3e-34 Score=322.04 Aligned_cols=201 Identities=27% Similarity=0.352 Sum_probs=164.2
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCC--CC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD--LH 256 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 256 (1389)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 999999999886543 245799999998 46
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMV 335 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~v 335 (1389)
++.+||+||+.+.....+... .+ + . .....+.+++.+||. +..++.+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~----------~~---------~--~-----------~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLS----------KK---------E--A-----------RKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCc----------HH---------H--H-----------HHHHHHHHHHHCCCChhHhhCCc
Confidence 678999999987543221100 00 0 0 001124567888985 5667777
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|+
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDL-GVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEE
Confidence 65 9999999999999999999999999999999999999999999998765467888777765 47778999999
Q ss_pred EEcCCeEEEec
Q 000615 416 LLSEGQIVYQG 426 (1389)
Q Consensus 416 lL~~G~iv~~G 426 (1389)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 308
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=324.77 Aligned_cols=206 Identities=22% Similarity=0.369 Sum_probs=172.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 8999999998765432 3579999999999998
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.+..+.... .... +....++.+++.+||++..++.+++
T Consensus 93 ~tv~enl~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD---------LSAE------------------------QREDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccc---------cCHH------------------------HHHHHHHHHHHHcCCHHHhhcchhh--
Confidence 9999999875322110 0000 0112356678899998777777765
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.++++++ .+.|+|++.|++ .++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH~~-~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNV-RETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEcCH-HHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999998875 467877777655 478899999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 309
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.4e-34 Score=320.60 Aligned_cols=194 Identities=28% Similarity=0.393 Sum_probs=163.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 46999999999999999999999999999999999999887 999999999886542 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.++....+.. .. .....++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK----------ER------------------------EIQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChhh
Confidence 8999999998864322100 00 0012356688899998877887766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++.|++ .++.+++|++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVATHDL-SLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCEEEEe
Confidence 999999999999999999999999999999999999999999999865 367777777665 5888899999999
Q ss_pred cCCe
Q 000615 418 SEGQ 421 (1389)
Q Consensus 418 ~~G~ 421 (1389)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 310
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-34 Score=325.45 Aligned_cols=204 Identities=22% Similarity=0.286 Sum_probs=170.7
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCC-CCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGEM 260 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1389)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999999887 999999999876432 2457999999974 67788
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|+++|+.|.....+.. .. + ....++.+++.+||.+..|+.+++
T Consensus 100 ~v~~~~~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 142 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------YD----------E--------------MHRRVSEALKQVDMLERADYEPNA--- 142 (269)
T ss_pred cHHHHHHhhHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCCchhhhCCccc---
Confidence 9999998864322110 00 0 011345678899998888877765
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.. +|+|++|++|
T Consensus 143 --LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~~-~d~i~~l~~G 218 (269)
T PRK13648 143 --LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAME-ADHVIVMNKG 218 (269)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHhc-CCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987645678888877764 5554 9999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998874
No 311
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.3e-34 Score=322.37 Aligned_cols=202 Identities=26% Similarity=0.364 Sum_probs=168.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999887 9999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhC-CcccccccccCc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG-LDICADTMVGDE 338 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lg-L~~~~dt~vg~~ 338 (1389)
+||+||+.++....+.. . ....+.+++.++ +++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~~~- 131 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRGGD- 131 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCChhh-
Confidence 99999998764321100 0 001244556665 55556677665
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+++|+|++|+
T Consensus 132 ----LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 132 ----LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYL-DFARELADRYYVME 206 (230)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998764467777777665 47888999999999
Q ss_pred CCeEEEecChhHH
Q 000615 419 EGQIVYQGPRDNV 431 (1389)
Q Consensus 419 ~G~iv~~G~~~~~ 431 (1389)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 312
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=331.09 Aligned_cols=205 Identities=25% Similarity=0.372 Sum_probs=171.9
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCC-CCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGEM 260 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 260 (1389)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 5899999999999999999999999999999999999987 9999999998754322 356899999963 34468
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+||+.+.....+.. .. .....++..++.+||++..++.+++
T Consensus 95 tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------EE------------------------TVAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCChhHhcCCccc---
Confidence 9999998754321110 00 0012356788999999888888866
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|++++.|++ .++.+.+|+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~-~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQL-DLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998775567777777665 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 313
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=340.96 Aligned_cols=195 Identities=25% Similarity=0.413 Sum_probs=170.2
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CcCceEEEecCCCCCCCCCC
Q 000615 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1389)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999887 99999999987531 12467999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.|+.+. . ....++.+++.+||++..++.+++
T Consensus 93 v~enl~~~~~~----------------~------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAK----------------S------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhh----------------h------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 99999875210 0 011246678899999888888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~-~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSL-DEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999875567777776654 58899999999999999
Q ss_pred EEEecChhHHH
Q 000615 422 IVYQGPRDNVL 432 (1389)
Q Consensus 422 iv~~G~~~~~~ 432 (1389)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 314
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=8.2e-34 Score=332.26 Aligned_cols=214 Identities=21% Similarity=0.259 Sum_probs=172.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCC--
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHD-- 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d-- 254 (1389)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742348999999999865432 14799999998
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 334 (1389)
.+.+.+||.+++.+....... ..+.+ ....+..+++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~~~~~------------------------~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------MSKAE------------------------AFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CCHHH------------------------HHHHHHHHHHHcCCCChHHH-
Confidence 688899999999764322110 00000 11235667888999754322
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+ +...+.|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|++++.|+ ...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHd-l~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHD-LGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECC-HHHHHHhCCEE
Confidence 1 234456999999999999999999999999999999999999999999999987656777666655 45778899999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1389)
++|++|++++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 315
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=327.93 Aligned_cols=215 Identities=21% Similarity=0.269 Sum_probs=174.2
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1389)
..++++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3578888886552 24699999999999999999999999999999999997431 1357999999
Q ss_pred CccCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000615 930 GYPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1389)
Q Consensus 930 g~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1389)
|.+.. ....++.++|++|++.+++. ||+||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98653 23455679999999988874 99999988764331 11 123345778888888742 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 678899999999
Q ss_pred ec----------CcEEEEecCC
Q 000615 1081 KR----------GGRVIYAGPL 1092 (1389)
Q Consensus 1081 ~~----------gG~~~~~g~~ 1092 (1389)
.+ .|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 3678888875
No 316
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=318.58 Aligned_cols=196 Identities=25% Similarity=0.388 Sum_probs=164.7
Q ss_pred ccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hhhhheeeEeccCCC
Q 000615 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDI 950 (1389)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~ 950 (1389)
+++.+ |||+++++ |+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.
T Consensus 11 ~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 85 (214)
T cd03297 11 PDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYA 85 (214)
T ss_pred CCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCc
Confidence 34445 99999999 99999999999999999999997653 47999999986531 124567999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 951 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
+++.+|+.||+.+..... .....++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|
T Consensus 86 ~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llll 155 (214)
T cd03297 86 LFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLL 155 (214)
T ss_pred cCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999998764321 1223345688999999998766665 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 156 DEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999765 899999999976 56678999999985 7887654
No 317
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=325.13 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=174.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYPK 933 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-g~~~G~i~i~g~~~ 933 (1389)
++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 45667766542 34699999999999999999999999999999999997431 23579999999876
Q ss_pred Ch---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCCCCC
Q 000615 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPGVSG 1006 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~~~~ 1006 (1389)
.. ...++.++|++|++.+++ .||+||+.+....+.... .....+++++++++.++|.+ ..+.. +..
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 42 345667999999998887 699999988654331111 12234456789999999953 22332 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|.+ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999976 57788999999984 899
Q ss_pred EEecCC
Q 000615 1087 IYAGPL 1092 (1389)
Q Consensus 1087 ~~~g~~ 1092 (1389)
++.|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 998874
No 318
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-34 Score=288.35 Aligned_cols=200 Identities=28% Similarity=0.431 Sum_probs=171.3
Q ss_pred ccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---hhh-heeeEeccC
Q 000615 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TFA-RVSGYCEQN 948 (1389)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~~-~~~gyv~Q~ 948 (1389)
......||++|++.|++||-+||+|||||||||||-+|+|...+ .+|+|.+.|++... + .+| +.+|+|+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 34567899999999999999999999999999999999998663 48999999988643 1 233 679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000615 949 DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1389)
Q Consensus 949 ~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1389)
..+.|++|..||+.....++..... +......+.|+.+||.+..+.. +.+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEE
Confidence 9999999999999998887753222 2234467899999998877666 4589999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1029 FMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|-||||-+||.++...|.+++-.+. +.|.|.|++||||. +...|||.+-|.. |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 9999999999999999999998885 45999999999975 6788999999974 78764
No 319
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=321.58 Aligned_cols=199 Identities=28% Similarity=0.402 Sum_probs=170.6
Q ss_pred eeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-hhhhheeeEeccCCCCCCCCCHHHH
Q 000615 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1389)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1389)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 8999999999999999999999999999999999765 347999999987643 1234679999999999999999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHH
Q 000615 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1389)
Q Consensus 961 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1040 (1389)
+.+..... .....+..+.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777764 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 899999999976 56778999999985 899988874
No 320
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=324.07 Aligned_cols=208 Identities=25% Similarity=0.351 Sum_probs=172.5
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 68 (241)
T PRK14250 4 IEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIK 68 (241)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 56777776542 2469999999999999999999999999999999999765 34799999998753
Q ss_pred h---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000615 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgG 1010 (1389)
. ...++.++|++|++.+++ .||+||+.+....+ .. ...++.++++.++|. +..+.. +..||||
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~~----~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G 135 (241)
T PRK14250 69 TIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---GE----KNVDVEYYLSIVGLNKEYATRD-----VKNLSGG 135 (241)
T ss_pred hcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---Cc----HHHHHHHHHHHcCCCHHHhhCC-----cccCCHH
Confidence 2 334567999999988876 69999998754321 11 123578899999996 455554 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..
T Consensus 136 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (241)
T PRK14250 136 EAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEY 213 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 999999999999999999999999999999999999999998764 899999999976 56778999999985 788888
Q ss_pred cCC
Q 000615 1090 GPL 1092 (1389)
Q Consensus 1090 g~~ 1092 (1389)
|+.
T Consensus 214 ~~~ 216 (241)
T PRK14250 214 AKT 216 (241)
T ss_pred CCH
Confidence 875
No 321
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.8e-34 Score=319.74 Aligned_cols=196 Identities=21% Similarity=0.347 Sum_probs=163.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999887 9999999998765432 1469999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
++.+||+||+.+........ .. +....++.+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VK------------------------EAKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChh
Confidence 98999999998753321100 00 001124567889999887788776
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
. |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|+|++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEE
Confidence 6 99999999999999999999999999999999999999999999987655678888877764 55 45799999
Q ss_pred EcCCeEE
Q 000615 417 LSEGQIV 423 (1389)
Q Consensus 417 L~~G~iv 423 (1389)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 322
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8e-35 Score=337.90 Aligned_cols=212 Identities=25% Similarity=0.408 Sum_probs=175.7
Q ss_pred CCceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000615 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1389)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1389)
.+.+|+|+|+++++. +++++|++|||+|++||.+||+|+|||||||++++|.+..+ .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999998764 23459999999999999999999999999999999998654 379999999
Q ss_pred ccC---ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------cccccc
Q 000615 931 YPK---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVG 1000 (1389)
Q Consensus 931 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g 1000 (1389)
+++ +.+.+|+.+||||||..++. -||.+|+.|+. .+.+.+ +|-++.+..++.+. -++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 975 44678899999999888765 59999999863 233333 35555566665443 344566
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
..| ..|||||||||+||||++.+|+|+++|||||.||..+...+++.+++.. .|+|+|++.|+. ++...||++++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~-~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM-SGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc-CCCeEEEEEecc--hhHhcCCEEEEE
Confidence 544 3599999999999999999999999999999999999999999999943 589999999985 578999999999
Q ss_pred ecCcEEEEecCC
Q 000615 1081 KRGGRVIYAGPL 1092 (1389)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1389)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 85 789998885
No 323
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=325.40 Aligned_cols=194 Identities=21% Similarity=0.280 Sum_probs=166.7
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHHH
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRE 264 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 264 (1389)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999887 8999999987643 2467999999999998899999
Q ss_pred HHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCC
Q 000615 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1389)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLS 344 (1389)
|+.+.... . ....++.+++.+||++..+..+++ ||
T Consensus 101 nl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS 135 (257)
T PRK11247 101 NVGLGLKG-----------Q-----------------------------WRDAALQALAAVGLADRANEWPAA-----LS 135 (257)
T ss_pred HHHhcccc-----------h-----------------------------HHHHHHHHHHHcCChhHhcCChhh-----CC
Confidence 99874210 0 001245678889998877777766 99
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000615 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1389)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~ 424 (1389)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~-~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDV-SEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999998765567877776665 47788999999999999999
Q ss_pred ecChh
Q 000615 425 QGPRD 429 (1389)
Q Consensus 425 ~G~~~ 429 (1389)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88764
No 324
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=323.51 Aligned_cols=220 Identities=20% Similarity=0.290 Sum_probs=176.0
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 367788776542 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.++.. ..+++.++|++|++.+++.+|++||+.+...... .....+.++.++++++.+++.+....... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87532 2456779999999999999999999987543321 11223334567889999998542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.||++++|. +|+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999975 689999999976 5678899999997 589
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 325
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=324.71 Aligned_cols=201 Identities=24% Similarity=0.329 Sum_probs=168.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 45999999999999999999999999999999999999887 89999999987642 34689999999989889999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
||+.+.....+.. .. + ....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~-----L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------KM----------Q--------------RLEIAHQMLKKVGLEGAEKRYIWQ-----L 129 (255)
T ss_pred HHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhHhhCChhh-----C
Confidence 9998753321110 00 0 011356688899998877877766 9
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc--CCe
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~--~G~ 421 (1389)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDI-EEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999998654467777776654 57889999999998 599
Q ss_pred EEEecChh
Q 000615 422 IVYQGPRD 429 (1389)
Q Consensus 422 iv~~G~~~ 429 (1389)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988754
No 326
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.2e-34 Score=341.23 Aligned_cols=194 Identities=26% Similarity=0.408 Sum_probs=168.2
Q ss_pred cceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hhhhheeeEeccCCCCCCCCCH
Q 000615 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 89999999999999999999999999999997653 47999999987532 1345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
+||+.|..... ...+.++.++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12334456899999999988877764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 67788999999985 899998875
No 327
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=334.85 Aligned_cols=222 Identities=18% Similarity=0.225 Sum_probs=176.3
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--ceEEEEEEEcCcc
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISGYP 932 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g~~ 932 (1389)
++++|++..++.. .+...+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 5778887655321 1235699999999999999999999999999999999997542 2357999999987
Q ss_pred CCh---hhh----hheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCC---CcHHHHHHHHHHHHHHcCCcccc---cc
Q 000615 933 KNQ---ETF----ARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSD---VDTKKRKMFVDEVMELVELKSLN---DS 997 (1389)
Q Consensus 933 ~~~---~~~----~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~~---~~ 997 (1389)
+.. ... ++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.++|.+.. +.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 111 246999999986 5788999999976422111000 11123456788999999997532 33
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCe
Q 000615 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1076 (1389)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 1076 (1389)
. +..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||+|||+++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4589999999999999999999999999999999999999999999999874 899999999976 56688999
Q ss_pred EEEEecCcEEEEecCC
Q 000615 1077 LLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1077 ~l~l~~gG~~~~~g~~ 1092 (1389)
+++|. +|++++.|+.
T Consensus 229 i~vm~-~G~ive~g~~ 243 (330)
T PRK15093 229 INVLY-CGQTVETAPS 243 (330)
T ss_pred EEEEE-CCEEEEECCH
Confidence 99997 5899999975
No 328
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=330.15 Aligned_cols=204 Identities=25% Similarity=0.362 Sum_probs=170.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCC-CCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDL-HHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~ 258 (1389)
.++|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 35999999999999999999999999999999999999887 9999999998864321 357999999975 466
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
..||+||+.|+....+.. +. +....++.+++.+||++..++.+++
T Consensus 92 ~~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~- 136 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------PI------------------------EIRKRVDRALAEIGLEKYRHRSPKT- 136 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHHHhcCCccc-
Confidence 789999998864322110 00 0012356678899999888888876
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++.|++. ++ ..+|+|++|+
T Consensus 137 ----LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~~~-~~-~~~d~v~~l~ 209 (274)
T PRK13644 137 ----LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHNLE-EL-HDADRIIVMD 209 (274)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCHH-HH-hhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 4778888777654 55 5799999999
Q ss_pred CCeEEEecChhHHH
Q 000615 419 EGQIVYQGPRDNVL 432 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1389)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999998864
No 329
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-34 Score=331.70 Aligned_cols=211 Identities=20% Similarity=0.242 Sum_probs=170.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC-CceeEEEECCeeCCCCCc-------CceEEEecCCC-
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL-RASGKITYCGHELNEFVP-------QRTCAYISQHD- 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 254 (1389)
.++|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 248999999999865432 13699999997
Q ss_pred -CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc---c
Q 000615 255 -LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI---C 330 (1389)
Q Consensus 255 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~---~ 330 (1389)
.+.|.+||.+++....+.... ..+. +....++..++.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~~~~------------------------~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------GNKK------------------------TRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------CCHH------------------------HHHHHHHHHHHHCCCCChHHH
Confidence 478889999998664322100 0000 01123567889999974 3
Q ss_pred ccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhh
Q 000615 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1389)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 410 (1389)
.+...++ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|++.|+ ...+.++
T Consensus 147 l~~~p~~-----LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHd-l~~~~~~ 220 (326)
T PRK11022 147 LDVYPHQ-----LSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHD-LALVAEA 220 (326)
T ss_pred HhCCchh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHh
Confidence 4555544 999999999999999999999999999999999999999999999987667777766654 4577889
Q ss_pred cCeEEEEcCCeEEEecChhHHHH
Q 000615 411 FDDIILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 411 ~D~iilL~~G~iv~~G~~~~~~~ 433 (1389)
+|+|++|++|++++.|+.+++.+
T Consensus 221 adri~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999998753
No 330
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.5e-34 Score=322.13 Aligned_cols=201 Identities=29% Similarity=0.425 Sum_probs=172.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhhheeeEeccCCCCCCCCCHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 469999999999999999999999999999999999765 3479999999876432 2346799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1389)
||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||++||++|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 222333456789999999987777653 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 99999999999998765 899999999986 5678899999998 5889998885
No 331
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=324.99 Aligned_cols=206 Identities=31% Similarity=0.474 Sum_probs=172.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 45999999999999999999999999999999999999887 8999999998754332 35699999998888889
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+||+.++....+.. .. .....++.+++.+||++..++.+++
T Consensus 92 tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS----------RA------------------------EDDALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCCC----------cH------------------------HHHHHHHHHHHHcCCHhHhcCCccc---
Confidence 9999998753211100 00 0011346678899998888888876
Q ss_pred cCCChhHhhHHHHHHHHh------cCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 341 RGISGGQKKRVTTGEMLV------GTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~------~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDL-NLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HHHHHhcCEE
Confidence 9999999999999999 599999999999999999999999999998744567777776654 4788899999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000615 415 ILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1389)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999988764
No 332
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=322.53 Aligned_cols=203 Identities=25% Similarity=0.406 Sum_probs=167.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999887 8999999998765432 3569999999999998
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHh-CCcccccccccCc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVGDE 338 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~l-gL~~~~dt~vg~~ 338 (1389)
+||+||+.++..... . . +. ...++.+++.+ +|.+..++.+++
T Consensus 95 ~tv~~~l~~~~~~~~---~---------~----------~~--------------~~~~~~~l~~~~~l~~~~~~~~~~- 137 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R---------D----------QF--------------QERIKWVYELFPRLHERRIQRAGT- 137 (237)
T ss_pred CcHHHHHHHhhhccC---h---------h----------HH--------------HHHHHHHHHHHHHHHHHHhCchhh-
Confidence 999999987532110 0 0 00 00123445555 466555666655
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|+
T Consensus 138 ----LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~~-~~~~~~~d~i~~l~ 211 (237)
T PRK11614 138 ----MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ-GMTIFLVEQNA-NQALKLADRGYVLE 211 (237)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCcH-HHHHhhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998763 67877776654 57889999999999
Q ss_pred CCeEEEecChhHHH
Q 000615 419 EGQIVYQGPRDNVL 432 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1389)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998874
No 333
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=318.41 Aligned_cols=197 Identities=32% Similarity=0.464 Sum_probs=164.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--cCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1389)
.++|+|+|+++++| +++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999887 999999998875432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+.....+.. + .+ ....++.+++.+||++..++.+++
T Consensus 89 v~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 130 (211)
T cd03264 89 VREFLDYIAWLKGIP----------S----------KE--------------VKARVDEVLELVNLGDRAKKKIGS---- 130 (211)
T ss_pred HHHHHHHHHHHhCCC----------H----------HH--------------HHHHHHHHHHHCCCHHHHhCchhh----
Confidence 999998754322110 0 00 012356678899998888888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|+ ..++.+++|++++|++|+
T Consensus 131 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vsH~-~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 131 -LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILSTHI-VEDVESLCNQVAVLNKGK 206 (211)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEcCC-HHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 4666666554 457778999999999999
Q ss_pred EEEec
Q 000615 422 IVYQG 426 (1389)
Q Consensus 422 iv~~G 426 (1389)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 334
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.9e-34 Score=391.47 Aligned_cols=214 Identities=26% Similarity=0.403 Sum_probs=176.2
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--------------------------------------
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-------------------------------------- 224 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-------------------------------------- 224 (1389)
..+||+|+|++|+||+.+||+||||||||||+++|.|+++|.
T Consensus 1180 ~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 (1466)
T PTZ00265 1180 NVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFS 1259 (1466)
T ss_pred CCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccc
Confidence 346999999999999999999999999999999999999972
Q ss_pred -------------CCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHH
Q 000615 225 -------------LRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRR 288 (1389)
Q Consensus 225 -------------~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ 288 (1389)
...+|+|++||+++++... ++.++||+|++.+|+ .||+|||.|+..
T Consensus 1260 ~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIreNI~~g~~----------------- 1321 (1466)
T PTZ00265 1260 LTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIYENIKFGKE----------------- 1321 (1466)
T ss_pred cccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHHHHHhcCCC-----------------
Confidence 0138999999999987764 578999999999985 799999998621
Q ss_pred HHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEec
Q 000615 289 EKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDE 368 (1389)
Q Consensus 289 e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDE 368 (1389)
+.+.++..+++..++.+ +. +-.|++.+||.||+ .+..||||||||++|||||+++|+||+|||
T Consensus 1322 --------~at~eeI~~A~k~A~l~-----~f---I~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLLDE 1384 (1466)
T PTZ00265 1322 --------DATREDVKRACKFAAID-----EF---IESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLLDE 1384 (1466)
T ss_pred --------CCCHHHHHHHHHHcCCH-----HH---HHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 11222333344333321 22 23589999999996 456699999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC----CeEE-EecChhHHHH
Q 000615 369 ISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE----GQIV-YQGPRDNVLE 433 (1389)
Q Consensus 369 ptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~----G~iv-~~G~~~~~~~ 433 (1389)
|||+||+.++..|.+.|+++....++|+|+..|++ ++.+.||+|++|++ |+++ ++|+++|+++
T Consensus 1385 aTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1385 ATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 99999999999999999987532468888887765 67889999999999 9955 8999999863
No 335
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4.7e-34 Score=338.43 Aligned_cols=199 Identities=26% Similarity=0.439 Sum_probs=171.0
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CcCceEEEecCCCCCCCCCC
Q 000615 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1389)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999887 89999999987532 12467999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.|+.+... .. + ....++.+++.+||++..|+.+.+
T Consensus 92 v~enl~~~~~~~~------------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------PS----------E--------------RRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccC------------hh----------H--------------HHHHHHHHHHHcCChhHhcCChhh----
Confidence 9999988643110 00 0 011356688999999888888876
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~-~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSL-QEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999875567777776655 57889999999999999
Q ss_pred EEEecChhHHH
Q 000615 422 IVYQGPRDNVL 432 (1389)
Q Consensus 422 iv~~G~~~~~~ 432 (1389)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998874
No 336
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.4e-34 Score=326.66 Aligned_cols=208 Identities=23% Similarity=0.328 Sum_probs=171.0
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCC--
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHD-- 254 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 254 (1389)
.+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999887 9999999998765422 35699999996
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 333 (1389)
.+++.+||+||+.+...... +..+ + .....++.+++.+||+ +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~------------------~~~~--~-------------~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLT------------------SLDE--S-------------EQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhc------------------CCCH--H-------------HHHHHHHHHHHHcCCChhhhhC
Confidence 46678999999976432100 0000 0 0112356678899996 56777
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ ..+.+++|+
T Consensus 147 ~~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~-~~~~~~~d~ 220 (265)
T TIGR02769 147 LPRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDL-RLVQSFCQR 220 (265)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHHHHHhcE
Confidence 7765 9999999999999999999999999999999999999999999998765467777776654 477789999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998874
No 337
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.2e-34 Score=326.97 Aligned_cols=223 Identities=21% Similarity=0.282 Sum_probs=177.6
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+..+.. +...+.+.+|+|+|+++++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 678888876531100 0001124699999999999999999999999999999999997653 4799999998754
Q ss_pred h---hhhhheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000615 935 Q---ETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLS 1008 (1389)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LS 1008 (1389)
. ...++.++|++|++. +.+.+|+.|++.+....+. .....+..+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 223456999999975 5678899999987654332 122334445688999999994 555554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 000615 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1389)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~ 1087 (1389)
|||||||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...||++++|. +|+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~-~G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMH-QGEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 5667899999998 48998
Q ss_pred EecCC
Q 000615 1088 YAGPL 1092 (1389)
Q Consensus 1088 ~~g~~ 1092 (1389)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88764
No 338
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.3e-34 Score=323.24 Aligned_cols=206 Identities=24% Similarity=0.357 Sum_probs=172.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----------------cCceE
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----------------PQRTC 247 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----------------~~~~~ 247 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 46999999999999999999999999999999999999887 999999999875321 24579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhhc-cCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhC
Q 000615 248 AYISQHDLHHGEMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG 326 (1389)
Q Consensus 248 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lg 326 (1389)
+|++|++.+++.+||.||+.++... .+.. . .+ ....++..++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R----------AE--------------AEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H----------HH--------------HHHHHHHHHHHcC
Confidence 9999999999999999999875321 0000 0 00 0112456788999
Q ss_pred CcccccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcch
Q 000615 327 LDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPE 406 (1389)
Q Consensus 327 L~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~ 406 (1389)
|++..+..+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .+
T Consensus 136 l~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~-~~ 209 (252)
T TIGR03005 136 LADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEM-GF 209 (252)
T ss_pred ChhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HH
Confidence 98877777655 9999999999999999999999999999999999999999999998765567777777665 47
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 000615 407 TYDLFDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 407 ~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 88899999999999999999988764
No 339
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=321.24 Aligned_cols=196 Identities=22% Similarity=0.297 Sum_probs=166.2
Q ss_pred cceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh-hhhheeeEeccCCCCCCCCCHHHHHHH
Q 000615 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVYESLLY 963 (1389)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 963 (1389)
|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999765 3479999999875421 124579999999999999999999987
Q ss_pred HHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000615 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1389)
Q Consensus 964 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1389)
..... ... .+..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 95 ~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred ccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 53211 111 1233556899999999988777764 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1044 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1044 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
.+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999998764 899999999976 56778999999985 899998875
No 340
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=339.89 Aligned_cols=191 Identities=26% Similarity=0.387 Sum_probs=166.7
Q ss_pred cceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hhhhheeeEeccCCCCCCCCCH
Q 000615 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999997653 47999999986532 2345779999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
+||+.|... ....+.++++++.++|.+..+..+ ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345889999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|.+ |+++..|+..
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999765 899999999986 67888999999985 8999998753
No 341
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=322.02 Aligned_cols=215 Identities=23% Similarity=0.276 Sum_probs=174.5
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467778776442 246999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++ .|++||+.|....... ....+..++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 234567999999998887 8999999886543211 122344456788999998743 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|.
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 699999999976 5778899999997
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+|++++.|+.
T Consensus 221 -~G~i~~~~~~ 230 (251)
T PRK14270 221 -MGDLIEFNKT 230 (251)
T ss_pred -CCeEEEeCCH
Confidence 4899998875
No 342
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.1e-34 Score=320.19 Aligned_cols=201 Identities=24% Similarity=0.328 Sum_probs=166.2
Q ss_pred eeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc--eEEEEEEEcCccCChhhh-hheeeEeccCCC--CCCCCC
Q 000615 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIKISGYPKNQETF-ARVSGYCEQNDI--HSPYVT 956 (1389)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 956 (1389)
+|+|||++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999976520 147999999987654333 357999999984 557789
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK---SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
+.|++.+...... . ..+...+.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 1 1233445689999999997 344444 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 57778999999985 899988874
No 343
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.46 Aligned_cols=209 Identities=25% Similarity=0.324 Sum_probs=172.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1389)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999886222399999999886432 2357999999974 5677
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
.||+||+.|..+..+.. .. +....++.+++.+||++..++.+.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~-- 143 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------RP------------------------EMIKIVRDVLADVGMLDYIDSEPAN-- 143 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------HH------------------------HHHHHHHHHHHHCCChhHhcCCccc--
Confidence 99999998753321110 00 0112356678899999888888765
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++ ..+|++++|++
T Consensus 144 ---LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~ 218 (282)
T PRK13640 144 ---LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD 218 (282)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987655778888877764 45 57999999999
Q ss_pred CeEEEecChhHHHH
Q 000615 420 GQIVYQGPRDNVLE 433 (1389)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1389)
|++++.|+++++.+
T Consensus 219 G~i~~~g~~~~~~~ 232 (282)
T PRK13640 219 GKLLAQGSPVEIFS 232 (282)
T ss_pred CEEEEeCCHHHHhc
Confidence 99999999988753
No 344
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-34 Score=322.81 Aligned_cols=215 Identities=26% Similarity=0.315 Sum_probs=173.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 367888876542 2469999999999999999999999999999999999632 2 12379999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87531 234567999999998877 899999987643321 1112333456788899998753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999976 5778899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 889998875
No 345
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=323.77 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=174.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1389)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478888876542 2469999999999999999999999999999999999653 11 1479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++..+.++++++.+++.+....... ..+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87531 2345679999999988875 99999987643321 11223344567889999998542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
.||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+ +|+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~-~G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY-MGE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999865 799999999986 5778899999997 589
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9998875
No 346
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=7.4e-34 Score=321.70 Aligned_cols=206 Identities=22% Similarity=0.363 Sum_probs=168.8
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CcCceEEEecCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1389)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999998763 12389999999987642 1246799999999888
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----ccccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~dt 333 (1389)
+ +||+||+.+..+..+... .. + ....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD---------KK----------E--------------LDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 999999988643221000 00 0 011346678889997 56666
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|+
T Consensus 141 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivsH~~-~~~~~~~d~ 212 (247)
T TIGR00972 141 SALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVTHNM-QQAARISDR 212 (247)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEecCH-HHHHHhCCE
Confidence 6665 999999999999999999999999999999999999999999999876 36777766654 478899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|+++++|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 347
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-35 Score=316.65 Aligned_cols=201 Identities=23% Similarity=0.307 Sum_probs=181.1
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---hh---hh-hheeeEeccCCCCCC
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QE---TF-ARVSGYCEQNDIHSP 953 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~---~~-~~~~gyv~Q~~~~~~ 953 (1389)
.-++|+|++++.||++.|||-||||||||+++|.+... +..|+|.++|.++. .. .+ ++.++.|+|+..++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 46899999999999999999999999999999999766 45899999998753 22 23 356999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
+.||.||+.|+..++ ..+++++++++.+.|+.+||....+.. +..|||||||||.|||||+.+|+||+||||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998776 567788999999999999999999988 458999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+|.|||--+..+++.|.++.++ ++|||++|||++ |.+..-||+.+|+ +|+++..|++.
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 9999999999999999988654 899999999997 7889999999997 69999999874
No 348
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.1e-34 Score=320.20 Aligned_cols=204 Identities=23% Similarity=0.298 Sum_probs=167.8
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC----CCCceeEEEECCeeCCCCCc-CceEEEecCCCC--CCC
Q 000615 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK----DLRASGKITYCGHELNEFVP-QRTCAYISQHDL--HHG 258 (1389)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 258 (1389)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 8999999998765432 257999999974 556
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc---ccccccc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD---ICADTMV 335 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~---~~~dt~v 335 (1389)
.+|+.|++.+.....+.. .. +....++.+++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------SK-------------------------QARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------HH-------------------------HHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999997653221100 00 0012356688899998 3456666
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|+|+
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDL-GVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 55 9999999999999999999999999999999999999999999998764467777776655 47888999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000615 416 LLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1389)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988874
No 349
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=330.44 Aligned_cols=205 Identities=22% Similarity=0.329 Sum_probs=169.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------cCceEEEecCCCC-
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDL- 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 255 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999987 999999999875321 1357999999962
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 334 (1389)
.+..+||+||+.|+....+.. +. +....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------ED------------------------EAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhHhhCC
Confidence 333689999998864321110 00 0012356688899997 567888
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|++++.| ...++.++||+|
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvlivsH-~~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILVTH-NMDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeC-CHHHHHHhCCEE
Confidence 776 999999999999999999999999999999999999999999999865 3667766655 556888999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000615 415 ILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1389)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 350
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=332.03 Aligned_cols=221 Identities=21% Similarity=0.267 Sum_probs=176.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.++++|+++.++. +.+.+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5789998876531 124599999999999999999999999999999999996431 23479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.++.. ..+++.++||+|++.+++ .|++||+.|...... ....+..++.+.++++.++|.+-.+..++. ...
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~~ 224 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDK-AGN 224 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhC-Ccc
Confidence 98642 245678999999998875 799999998643221 111222334578889998875433333332 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.+|++++|+ +|+
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~-~G~ 301 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFY-QGW 301 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999875 799999999976 4666799999998 589
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
+++.|++
T Consensus 302 i~e~g~~ 308 (329)
T PRK14257 302 IEEAGET 308 (329)
T ss_pred EEEeCCH
Confidence 9999986
No 351
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.6e-34 Score=319.05 Aligned_cols=196 Identities=24% Similarity=0.319 Sum_probs=163.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999887 999999999876432 235799999999888
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+||+||+.+.....+... .+ ....++..++.+||++..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG--------------------DD--------------IRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH--------------------HH--------------HHHHHHHHHHHcCChhhhhCCchh
Confidence 89999999988543221100 00 011245678889998877777766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +.|++++.|++ .++...+|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~~-~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV-GVTVLMATHDI-GLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 66777666554 5788899999999
Q ss_pred cCCeEE
Q 000615 418 SEGQIV 423 (1389)
Q Consensus 418 ~~G~iv 423 (1389)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 352
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-34 Score=327.99 Aligned_cols=206 Identities=24% Similarity=0.313 Sum_probs=172.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----cCceEEEecCCCC-CCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDL-HHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 258 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999999886422 2467999999974 233
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 338 (1389)
..||.||+.|+....+.. .. + ....++.+++.+||++..++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------PE----------E--------------IRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------HH----------H--------------HHHHHHHHHHHCCCHhHhhCCccc-
Confidence 469999998864322110 00 0 012356788999999888888876
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++.. +|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~~-~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAVE-ADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHhc-CCEEEEEE
Confidence 99999999999999999999999999999999999999999999997655778888877765 5544 99999999
Q ss_pred CCeEEEecChhHHHH
Q 000615 419 EGQIVYQGPRDNVLE 433 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1389)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998753
No 353
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.59 Aligned_cols=206 Identities=20% Similarity=0.298 Sum_probs=165.0
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CcCceEEEecCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1389)
++|+|+|++|++||+++|+||||||||||+++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999987621 1389999999987421 1246799999998887
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCC----cccccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL----DICADT 333 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL----~~~~dt 333 (1389)
+ +||+||+.|+....+... . .+ ....++..++.+|| ++..|+
T Consensus 101 ~-~tv~eni~~~~~~~~~~~---------~----------~~--------------~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKD---------K----------KK--------------LDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCC---------H----------HH--------------HHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 899999988643221000 0 00 01124456677776 344566
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|+
T Consensus 147 ~~~~-----LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~sH~~-~~~~~~~d~ 218 (254)
T PRK14273 147 NALS-----LSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--SYTIIIVTHNM-QQAGRISDR 218 (254)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCE
Confidence 6655 999999999999999999999999999999999999999999999854 56777766654 478889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|+++.+|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 354
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=323.81 Aligned_cols=221 Identities=22% Similarity=0.289 Sum_probs=174.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999887 9999999998765432 2358999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++....... +....+... ....+ .. .+....++..++.+||++..++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~~---~~~~~--~~-----------~~~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLKT---PAFRR--AE-----------SEALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhccc---ccccc--ch-----------hHHHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999999864311000 000000000 00000 00 00112356678899998888888876
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~-~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDM-KLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998765467777776654 588899999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 355
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.7e-34 Score=319.46 Aligned_cols=202 Identities=27% Similarity=0.322 Sum_probs=167.5
Q ss_pred eeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHHHHH
Q 000615 187 LKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETL 266 (1389)
Q Consensus 187 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 266 (1389)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999887 9999999998865432 248999999999999999999
Q ss_pred HHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChh
Q 000615 267 DFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGG 346 (1389)
Q Consensus 267 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGG 346 (1389)
.+........ .... +....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~--------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LSKS------------------------ERRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CCHH------------------------HHHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8753200000 0000 0011346678899999888888776 9999
Q ss_pred HhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEec
Q 000615 347 QKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQG 426 (1389)
Q Consensus 347 qkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G 426 (1389)
|||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDV-DEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999998765567877777665 4788999999999999999998
Q ss_pred ChhHH
Q 000615 427 PRDNV 431 (1389)
Q Consensus 427 ~~~~~ 431 (1389)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 76544
No 356
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=323.31 Aligned_cols=216 Identities=22% Similarity=0.306 Sum_probs=175.8
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--IEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~--~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..... + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 467888876542 245999999999999999999999999999999999965421 2 479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++ .||+||+.+....+. ..+..+.++.+.++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654332 1122333456788899998842 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 457999999999999999999999999999999999999999999999865 699999999987 6788899999997
Q ss_pred c----CcEEEEecCC
Q 000615 1082 R----GGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~----gG~~~~~g~~ 1092 (1389)
. +|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999875
No 357
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=7.3e-34 Score=309.34 Aligned_cols=190 Identities=52% Similarity=0.874 Sum_probs=160.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCC--CCceEEEEEEEcCc
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYIEGDIKISGY 931 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~--~~g~~~G~i~i~g~ 931 (1389)
.++++|+++.++... +...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 467888887653110 001246999999999999999999999999999999999976 4 45899999999
Q ss_pred cCChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000615 932 PKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1389)
Q Consensus 932 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1389)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8765456678999999999999999999997643110 499999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|.+ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986457788999999985 7887654
No 358
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=326.81 Aligned_cols=216 Identities=24% Similarity=0.321 Sum_probs=178.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++. .....+|+|||+++++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 3678888775531 012359999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hhhhheeeEeccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 42 235677999999974 567789999998764322 123344445689999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++ ..+|++++|.+ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999976 34 46999999985 78988
Q ss_pred ecCC
Q 000615 1089 AGPL 1092 (1389)
Q Consensus 1089 ~g~~ 1092 (1389)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 359
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.7e-34 Score=316.62 Aligned_cols=198 Identities=27% Similarity=0.364 Sum_probs=169.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999887 999999999875432 35799999999989889999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
||+.+.....+. ....+..+++.+||++..|..+++ |
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 999875332110 001245577889999888887766 9
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEE
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv 423 (1389)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHILS-EVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCHH-HHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999865 4678777777654 788899999999999999
Q ss_pred EecChhH
Q 000615 424 YQGPRDN 430 (1389)
Q Consensus 424 ~~G~~~~ 430 (1389)
+.|++.+
T Consensus 204 ~~~~~~~ 210 (223)
T TIGR03740 204 YQGKINK 210 (223)
T ss_pred EecChhh
Confidence 9998753
No 360
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=321.22 Aligned_cols=215 Identities=24% Similarity=0.342 Sum_probs=173.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367778776542 24699999999999999999999999999999999996431 12479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...++.++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87542 234667999999988887 8999999886543211 122334556788899988743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|.
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999985 4899999999976 5778899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 5 889888864
No 361
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-34 Score=326.56 Aligned_cols=205 Identities=28% Similarity=0.394 Sum_probs=169.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-----cCceEEEecCCCC-CC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL-HH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 257 (1389)
+++|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 35999999999999999999999999999999999999887 899999999874211 2357999999963 33
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
..+||+||+.++....+. .+.+ ....+..+++.+||++..++.+++
T Consensus 92 ~~~tv~e~i~~~~~~~~~----------~~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~ 137 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGL----------SKEE------------------------VEKRVKEALKAVGMEGFENKPPHH 137 (275)
T ss_pred ccccHHHHHHHHHHHcCC----------CHHH------------------------HHHHHHHHHHHCCCchhhcCChhh
Confidence 457999999875321110 0000 011345688899999888888876
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++. +.|++++.|+ ..++.++||++++|
T Consensus 138 -----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~~til~vtH~-~~~~~~~~d~i~~l 210 (275)
T PRK13639 138 -----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE-GITIIISTHD-VDLVPVYADKVYVM 210 (275)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecC-HHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998763 6777777665 45778899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999875
No 362
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.6e-34 Score=320.73 Aligned_cols=212 Identities=25% Similarity=0.369 Sum_probs=172.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 46999999999999999999999999999999999999887 8999999998764432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++...... .+..... .. . ......++..++.+||++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~~--~~~~~~~----------~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDKS--VFASLFF----------RL-S-------------AEEKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhcccc--ccccccc----------cc-H-------------HHHHHHHHHHHHHcCCchhhcCChhh--
Confidence 9999999885331100 0000000 00 0 00112356788899999888888876
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.++||+|++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVEHDM-EFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEECCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999865 56777776654 578889999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988763
No 363
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=321.26 Aligned_cols=218 Identities=24% Similarity=0.349 Sum_probs=173.7
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 931 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~ 931 (1389)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 57778776542 246999999999999999999999999999999999965321 25799999998
Q ss_pred cCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000615 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1389)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1389)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+... ...+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhh
Confidence 7532 234567999999998887 899999988653321 1122334456788899998854211111 112458
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.+ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999976 57788999999985 889
Q ss_pred EEecCC
Q 000615 1087 IYAGPL 1092 (1389)
Q Consensus 1087 ~~~g~~ 1092 (1389)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888874
No 364
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=331.14 Aligned_cols=208 Identities=20% Similarity=0.259 Sum_probs=173.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------cCceEEEecCCC--C
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD--L 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 255 (1389)
+.+|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|+++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999886 899999999986543 235799999997 5
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 334 (1389)
+.+.+||.+++.+..+.... +.+. +....+..+++.+||+ ...++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSAA------------------------ERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCHH------------------------HHHHHHHHHHHHCCCChHHhcCC
Confidence 88889999999765332100 0000 0112356788999996 466777
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+++ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+..+.|+|++. |....+.+++|+|
T Consensus 152 p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iT-Hdl~~~~~~adrv 225 (327)
T PRK11308 152 PHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFIS-HDLSVVEHIADEV 225 (327)
T ss_pred Ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhCCEE
Confidence 765 9999999999999999999999999999999999999999999999876566766655 4556788899999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000615 415 ILLSEGQIVYQGPRDNVLE 433 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~~ 433 (1389)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998853
No 365
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=323.13 Aligned_cols=207 Identities=22% Similarity=0.310 Sum_probs=166.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcCccCCh-----hhhhheeeEeccCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH 951 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 951 (1389)
+.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.+... ...++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999753 11 247999999986532 1346679999999988
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000615 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1389)
Q Consensus 952 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1389)
++. ||.||+.+....+. .....+..++.++++++.++|.+........ .+..||||||||++||++|+.+|+||+||
T Consensus 98 ~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 174 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMD 174 (251)
T ss_pred ccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 875 99999987643321 1112233445678999999986522111111 24579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 175 EPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4899999999976 56778999999985 899988874
No 366
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.72 Aligned_cols=219 Identities=24% Similarity=0.285 Sum_probs=173.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 356777775442 346999999999999999999999999999999999965421 2479999999
Q ss_pred ccCC----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000615 931 YPKN----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1389)
Q Consensus 931 ~~~~----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1389)
.+.. ....++.++|++|++.+++ .||.||+.+...... ....+...+.+.++++.+++.+....... ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCccc
Confidence 8753 2245667999999998887 899999987643221 11123334567888888887532111111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 699999999986 57788999999985 899
Q ss_pred EEecCC
Q 000615 1087 IYAGPL 1092 (1389)
Q Consensus 1087 ~~~g~~ 1092 (1389)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 988874
No 367
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-34 Score=317.66 Aligned_cols=206 Identities=27% Similarity=0.342 Sum_probs=175.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-cCceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 262 (1389)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.... .++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999987 899999999886543 24679999999999988999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+.....+.. +. .....++.+++.+||++..++.+.+
T Consensus 90 ~~nl~~~~~~~~~~---------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (232)
T cd03300 90 FENIAFGLRLKKLP---------------------KA-------------EIKERVAEALDLVQLEGYANRKPSQ----- 130 (232)
T ss_pred HHHHHHHHHhcCCC---------------------HH-------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99998764322110 00 0011356788899999888887765
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~-~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQ-EEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765477888887766 467889999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887764
No 368
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.1e-33 Score=358.90 Aligned_cols=210 Identities=28% Similarity=0.394 Sum_probs=175.6
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++++|++|.++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46899999997742 124699999999999999999999999999999999997663 47999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
.. ...+++.+|||+|++.+++ .|++||+.++. .+.++ +.++++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 53 4567899999999998875 59999997641 12222 336777888877654 34556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|++||+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 357999999999999999999999999999999999999999999986 4899999999975 5677999999984
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999984
No 369
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1e-33 Score=314.85 Aligned_cols=195 Identities=26% Similarity=0.408 Sum_probs=166.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh------hhhhheeeEeccCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1389)
+.+|+||||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 569999999999999999999999999999999999765 357999999987532 134577999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
.+|+.||+.+...... ....++..+.+.++++.++|.+..+.. +..||+|||||++||++|+.+|++|+||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999998654321 123344456789999999998777765 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1034 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
|+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 4899999999975 5678999999975 654
No 370
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=354.75 Aligned_cols=218 Identities=26% Similarity=0.351 Sum_probs=181.4
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAF-------------PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEe-------------CCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 6777877654 234699999999999999999999999999999999997653 4799999998753
Q ss_pred h----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 935 Q----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
. ...++.++|++|++.+++.+||+|++.+....+.. ...+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 2 11245699999999999999999999886432211 11122334456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||||+||++|+.+|++|||||||+|||+.++..+++.|+++++.|.|||++||+++ ++.+.||++++|.+ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 899998
Q ss_pred cCCCc
Q 000615 1090 GPLGH 1094 (1389)
Q Consensus 1090 g~~~~ 1094 (1389)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88754
No 371
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.6e-34 Score=316.34 Aligned_cols=195 Identities=27% Similarity=0.358 Sum_probs=161.1
Q ss_pred cccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCC
Q 000615 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ 954 (1389)
..++++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+...+.+.
T Consensus 30 ~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~ 98 (224)
T cd03220 30 GEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPE 98 (224)
T ss_pred hhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCC
Confidence 34556789999999999999999999999999999999999765 347999999976421 1112334577
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+||+||+.+....+. ....+.++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||
T Consensus 99 ~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~ 170 (224)
T cd03220 99 LTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVL 170 (224)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987654321 223344456888999999988777764 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 171 ~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 171 AVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999998777899999999976 56678999999974 7887654
No 372
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.6e-33 Score=357.83 Aligned_cols=211 Identities=23% Similarity=0.378 Sum_probs=176.0
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++++|++|.++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEE
Confidence 36899999987631 23599999999999999999999999999999999997663 47999999987
Q ss_pred C---ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 K---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
+ +...+++.+|||+|++.+++. |++||+.++.. .+.++ +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 5 345678899999999998765 99999987521 12222 336677777776543 35566653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999985 4899999999975 5688999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999984
No 373
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7.2e-34 Score=323.64 Aligned_cols=205 Identities=23% Similarity=0.307 Sum_probs=169.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC----------------CcCceE
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF----------------VPQRTC 247 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 247 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 46999999999999999999999999999999999999886 89999999887431 113579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhh-ccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhC
Q 000615 248 AYISQHDLHHGEMTVRETLDFSGR-CLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG 326 (1389)
Q Consensus 248 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lg 326 (1389)
+|++|++.+++.+||+||+.++.. ..+.. . . .....+..+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------K----------Q--------------EARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------H----------H--------------HHHHHHHHHHHHcC
Confidence 999999999999999999987431 11000 0 0 00123456788999
Q ss_pred Ccccc-cccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 000615 327 LDICA-DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAP 405 (1389)
Q Consensus 327 L~~~~-dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~ 405 (1389)
|++.. +..+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .
T Consensus 141 l~~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivsH~~-~ 213 (257)
T PRK10619 141 IDERAQGKYPVH-----LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHEM-G 213 (257)
T ss_pred CChhhhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-H
Confidence 97653 665554 999999999999999999999999999999999999999999999875 367777776654 5
Q ss_pred hHHhhcCeEEEEcCCeEEEecChhHHH
Q 000615 406 ETYDLFDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 406 ~~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 778899999999999999999988764
No 374
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=319.75 Aligned_cols=201 Identities=24% Similarity=0.366 Sum_probs=167.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 16 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 16 KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 35899999999999999999999999999999999999887 999999999875432 2457999999988876 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccccccCcc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVGDEM 339 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~vg~~~ 339 (1389)
||+||+.+.....+ . ....++.+++.+||+ +..++.+.+
T Consensus 92 tv~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~-- 131 (241)
T PRK14250 92 TVKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRDVKN-- 131 (241)
T ss_pred hHHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCCccc--
Confidence 99999976432110 0 001245578889996 456666655
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++
T Consensus 132 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~-~~~~~~~d~i~~l~~ 207 (241)
T PRK14250 132 ---LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNM-EQAKRIGDYTAFLNK 207 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccH-HHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998764467777776654 478889999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|+++..|+++++.
T Consensus 208 G~i~~~~~~~~~~ 220 (241)
T PRK14250 208 GILVEYAKTYDFF 220 (241)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998764
No 375
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.80 Aligned_cols=204 Identities=22% Similarity=0.337 Sum_probs=167.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------cCceEEEecCCC--
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHD-- 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 254 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999887 999999999875421 235699999996
Q ss_pred CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccc
Q 000615 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 333 (1389)
.++ ..||+||+.|.....+.. .. + ....++.+++.+||. ...++
T Consensus 97 ~~~-~~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~ 141 (280)
T PRK13649 97 QLF-EETVLKDVAFGPQNFGVS----------QE----------E--------------AEALAREKLALVGISESLFEK 141 (280)
T ss_pred hhc-cccHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhhhhC
Confidence 344 479999998754321110 00 0 011245678889997 45677
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+
T Consensus 142 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH~~-~~~~~~~d~ 214 (280)
T PRK13649 142 NPFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTHLM-DDVANYADF 214 (280)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeccH-HHHHHhCCE
Confidence 7765 999999999999999999999999999999999999999999999875 367877777665 477889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
+++|++|++++.|+++++.
T Consensus 215 i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 215 VYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999998874
No 376
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.7e-34 Score=365.38 Aligned_cols=210 Identities=24% Similarity=0.406 Sum_probs=175.5
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++... +++.+|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3689999986432 1246999999999999999999999999999999999976 3 37999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
+. ...+++.++||+|++.++.. |++||+.++. .+.++ ++++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 54 46678899999999998764 9999998852 12333 346777777776543 35667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
| .+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ..+.+|++++|+
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~- 557 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQ- 557 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEe-
Confidence 3 4699999999999999999999999999999999999999999999885 5899999999975 567899999998
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
+|++++.|+.
T Consensus 558 ~G~i~e~G~~ 567 (588)
T PRK11174 558 DGQIVQQGDY 567 (588)
T ss_pred CCeEeecCCH
Confidence 5899999974
No 377
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=314.61 Aligned_cols=210 Identities=22% Similarity=0.347 Sum_probs=173.3
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC-C-c-eEEEEEEEcCccC---Chhh---hh-heeeEeccC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YIEGDIKISGYPK---NQET---FA-RVSGYCEQN 948 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~-g-~~~G~i~i~g~~~---~~~~---~~-~~~gyv~Q~ 948 (1389)
..++++||||++++||++||+|.|||||||+.++|.|... + + ..+|+|.++|.++ +.+. +| +.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 3579999999999999999999999999999999999654 2 3 4568999999864 2222 22 469999999
Q ss_pred CC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000615 949 DI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPS 1026 (1389)
Q Consensus 949 ~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ 1026 (1389)
+. +.|.+||.+-+.-....+.... ..++..+++.++|+.+++.+-....-. -+..|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~--YPhelSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKS--YPHELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhh--CCcccCCcHHHHHHHHHHHhCCCC
Confidence 74 7789999888766554432211 345567788999999999864322211 145899999999999999999999
Q ss_pred CceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1027 IIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1027 illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
+||.||||++||...+++|+++|+++.+ .|.|+|++|||+. -+.+.||++.+|. .|++++.|+..
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE-CcEEEEeCCHH
Confidence 9999999999999999999999999986 5999999999987 4889999999998 59999999963
No 378
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.54 Aligned_cols=206 Identities=20% Similarity=0.307 Sum_probs=166.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCCC-----cCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.+++.. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987410 13899999999875321 24579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++ +||+||+.|+.+..+.. .. + ....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------KK----------D--------------LDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCCcchhhhhc
Confidence 87 89999998864322110 00 0 011245577788873 3456
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|
T Consensus 150 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~~tiiivsH~~-~~~~~~~d 221 (258)
T PRK14268 150 SPALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--DYTIVIVTHNM-QQAARISD 221 (258)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--CCEEEEEECCH-HHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999864 56777776654 57788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 379
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-33 Score=313.46 Aligned_cols=202 Identities=19% Similarity=0.300 Sum_probs=151.9
Q ss_pred CceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCc
Q 000615 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1389)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1389)
|..+-++|++|-++ +.+.++++++|-|.-...+||+||||.||||||++|.|..++ ..|+..-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--
Confidence 44566777776543 345789999999999999999999999999999999998764 35654322
Q ss_pred cCChhhhhheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 932 PKNQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 932 ~~~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.+-++|+..|... +...-|.-|.|.-. + +.+.++ ....|-.+||...++++- ++.|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~--F----Nlpyq~----ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRK--F----NLPYQE----ARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHh--c----CCChHH----HHHHhhhhhhhhccceEe----eeecCC
Confidence 2335788877543 33345666655321 1 222222 456788899988888763 578999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
|||-||++|-.-++.|+||||||||++||..+...+-++|++. ...||+++|+-.+ +.+--+.+.++.+.|.-...
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999886 4679999999763 55666778888776655555
Q ss_pred cCCC
Q 000615 1090 GPLG 1093 (1389)
Q Consensus 1090 g~~~ 1093 (1389)
|...
T Consensus 784 GdFe 787 (807)
T KOG0066|consen 784 GDFE 787 (807)
T ss_pred ccHH
Confidence 6543
No 380
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=328.39 Aligned_cols=211 Identities=20% Similarity=0.308 Sum_probs=168.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 12389999999998632 235679999999998
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
++ .||+||+.|+....+.. .++ . ....++..++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~----------~~~----------~-------------~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIN----------DRK----------I-------------LEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCC----------hHH----------H-------------HHHHHHHHHHHcCCcchhhhhhh
Confidence 85 79999999864321100 000 0 01123456677777655555555
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
+ .+..|||||||||+||||++.+|+||+|||||+|||+.+...+.+.|+++.+ +.|+|++.|++ ..+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~~Tii~iTH~l-~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--KYSIIIVTHSM-AQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCEEEE
Confidence 3 4566999999999999999999999999999999999999999999998865 56777766654 477788999999
Q ss_pred EcCCeEEEecChhHHH
Q 000615 417 LSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1389)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999984
No 381
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=319.43 Aligned_cols=206 Identities=22% Similarity=0.315 Sum_probs=162.9
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1389)
++|+|+|+++++|++++|+|||||||||||++|+|.++ +....+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 59999999999999999999999999999999999864 1001389999999987532 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----cccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~dt 333 (1389)
+ .||+||+.++....+.... .+ ....++..++.+||.+ ..++
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-------------------AY--------------LAERVERSLRHAALWDEVKDRLHE 145 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-------------------HH--------------HHHHHHHHHHHcCCchhhhHHhhC
Confidence 7 5999999886432211000 00 0112445677778753 2344
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 146 ~~~-----~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~tH~~-~~~~~~~d~ 217 (253)
T PRK14242 146 SAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--RYTIIIVTHNM-QQAARVSDV 217 (253)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCeEEEEEecH-HHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999853 56777766654 478899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|++++.|+++++.
T Consensus 218 v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 218 TAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 382
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=322.81 Aligned_cols=205 Identities=20% Similarity=0.278 Sum_probs=170.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1389)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999987 999999999876432 2467999999974 5777
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
.||.||+.++....+.. +.+ ....++.+++.+||.+..++.+.+
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------REE------------------------MIKRVDEALLAVNMLDFKTREPAR-- 140 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998754321110 000 011356778889998878887765
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+.. ++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~~-~~d~i~~l~~ 215 (277)
T PRK13642 141 ---LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EAA-SSDRILVMKA 215 (277)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHH-hCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987655778888776654 454 6999999999
Q ss_pred CeEEEecChhHHH
Q 000615 420 GQIVYQGPRDNVL 432 (1389)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1389)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 383
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=317.27 Aligned_cols=204 Identities=27% Similarity=0.421 Sum_probs=173.5
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCHHH
Q 000615 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRE 264 (1389)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 264 (1389)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999987 8999999998865332 457999999999999999999
Q ss_pred HHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCC
Q 000615 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1389)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLS 344 (1389)
|+.++....+.. . .+ ....+...++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------K----------KE--------------IERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 998753221100 0 00 011245678889998888888866 99
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000615 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1389)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~ 424 (1389)
|||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++++..+.|++++.|++ +++.+++|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~-~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDF-EEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998765577888877765 47888999999999999999
Q ss_pred ecChhHHH
Q 000615 425 QGPRDNVL 432 (1389)
Q Consensus 425 ~G~~~~~~ 432 (1389)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99988764
No 384
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.38 Aligned_cols=221 Identities=22% Similarity=0.293 Sum_probs=176.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.++++|+++.++ ...+|+|+|+++++||++||+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478888876542 235999999999999999999999999999999999975431 1368999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.+... ...++.++|++|++.+++ .|+.||+.+...... ..+..+..+.+.++++.+++.+..+...+ ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87521 234567999999988887 899999987643221 11223334568899999998542211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhCeEEEEecC-
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG- 1083 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~l~l~~g- 1083 (1389)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.||++++|+++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 677889999999853
Q ss_pred ---cEEEEecCC
Q 000615 1084 ---GRVIYAGPL 1092 (1389)
Q Consensus 1084 ---G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999875
No 385
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-34 Score=289.08 Aligned_cols=205 Identities=24% Similarity=0.338 Sum_probs=177.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCCHH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1389)
..+|+|||++|.+|+.++++||||||||||||+++|+.+|. .|+|.+||.+++.. ...-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999997 99999999998753 33458999999999999999
Q ss_pred HHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCC
Q 000615 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1389)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGL 343 (1389)
||++|+.+.+|.+.. .++ ..+.+.+...||++..+..+-+ |
T Consensus 93 dNvafgL~l~Gi~k~-------~R~---------------------------~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QRR---------------------------EIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HHH---------------------------HHHHHHHHHhCcccccccceEe-----e
Confidence 999999998886532 111 2356788899999888888766 9
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc--CCe
Q 000615 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1389)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~--~G~ 421 (1389)
||||||||.|||||..+|+.|+||||+.+||+-+++++.+.|-++.+..++.+++. +|...|..-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lli-TH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLI-THDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEE-eccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999999988776665554 566778889999999998 489
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
|+..-+++-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998877764433
No 386
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-34 Score=313.99 Aligned_cols=195 Identities=23% Similarity=0.346 Sum_probs=163.7
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCHHHHHH
Q 000615 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1389)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1389)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999887 8999999998765432 357999999999999999999998
Q ss_pred HhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhH
Q 000615 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1389)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1389)
++....... .. +....++.+++.+||++..++.+.+ |||||
T Consensus 93 ~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGLKL--------------------TA--------------EDRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred cccccccCc--------------------cH--------------HHHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 753211000 00 0012356688899998888887765 99999
Q ss_pred hhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEec
Q 000615 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQG 426 (1389)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G 426 (1389)
||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQ-PEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999999876556777776655 45788899999999999998764
No 387
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.72 Aligned_cols=214 Identities=21% Similarity=0.271 Sum_probs=173.2
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--ceEEEEEEEcC
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISG 930 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g 930 (1389)
..++++|+++.+ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~--------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQA--------------AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEe--------------ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 357888887654 13599999999999999999999999999999999997653 11579999999
Q ss_pred ccCChhhh-hheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000615 931 YPKNQETF-ARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS---LNDSMVGLPGV 1004 (1389)
Q Consensus 931 ~~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~~g~~~~ 1004 (1389)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..+.. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643323 356999999974 4466899999876443221 111 2256889999999976 23443 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
..|||||||||+|||+|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~-~ 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMS-H 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEE-C
Confidence 579999999999999999999999999999999999999999999998764 899999999976 5667899999997 4
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 899988874
No 388
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=322.68 Aligned_cols=216 Identities=24% Similarity=0.313 Sum_probs=175.7
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1389)
..++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3578889887652 24699999999999999999999999999999999997542 1357999999
Q ss_pred CccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000615 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1389)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1389)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 165 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN-- 165 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC--
Confidence 987532 2346789999999988886 99999987653321 1112233456788999998853 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
+..||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|
T Consensus 166 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 240 (272)
T PRK14236 166 ---AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFM 240 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999975 799999999976 567789999999
Q ss_pred ecCcEEEEecCC
Q 000615 1081 KRGGRVIYAGPL 1092 (1389)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1389)
.+ |+++..|+.
T Consensus 241 ~~-G~i~~~g~~ 251 (272)
T PRK14236 241 YM-GKLVEYGDT 251 (272)
T ss_pred EC-CEEEecCCH
Confidence 85 899988874
No 389
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-33 Score=316.63 Aligned_cols=198 Identities=24% Similarity=0.348 Sum_probs=165.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-------CceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999887 9999999998765432 2469999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
++.+||.||+.+.....+.. . . +....++.+++.+||.+..++.++
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGES----------S----------R--------------QSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC----------H----------H--------------HHHHHHHHHHHHcCCHhHhhCChh
Confidence 99999999998753221100 0 0 001235667889999888888877
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|++++
T Consensus 146 ~-----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~ 218 (228)
T PRK10584 146 Q-----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLR 218 (228)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEE
Confidence 6 99999999999999999999999999999999999999999999987655778888877765 55 56999999
Q ss_pred EcCCeEEEe
Q 000615 417 LSEGQIVYQ 425 (1389)
Q Consensus 417 L~~G~iv~~ 425 (1389)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 390
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-34 Score=324.70 Aligned_cols=210 Identities=22% Similarity=0.336 Sum_probs=172.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999887 8999999998754322 35799999998888889
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||.||+.++..... +. . +. .... ....++.+++.+||++..++.+++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 147 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------GR-FGAA--------------DREKVEEAISLVGLKPLAHRLVDS--- 147 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------cC-CCHH--------------HHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987532100 00 0 00 0000 012346688899998878888876
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|
T Consensus 148 --LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~-~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 148 --LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDI-NMAARYCDYLVALRGG 224 (265)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998765467777776654 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999988763
No 391
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.3e-34 Score=314.64 Aligned_cols=194 Identities=29% Similarity=0.430 Sum_probs=160.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCC-CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999887 999999999876432 2357999999974 4667
Q ss_pred CCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcc
Q 000615 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1389)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 339 (1389)
+||+||+.++....+.. .. + ....++.+++.+||++..++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------EE----------E--------------IEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCcHhhhcCCccc--
Confidence 89999998753321100 00 0 011345678899998877887766
Q ss_pred ccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcC
Q 000615 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1389)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~ 419 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++..++|+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~sH~~-~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVTHDL-DLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998764 67777776654 578888999999999
Q ss_pred Ce
Q 000615 420 GQ 421 (1389)
Q Consensus 420 G~ 421 (1389)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 392
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.42 Aligned_cols=216 Identities=23% Similarity=0.293 Sum_probs=173.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCce---EEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---IEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~---~~G~i~i~g 930 (1389)
.+.++|+++.++ ++.+|+|||++|++||++||+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 466777776542 3469999999999999999999999999999999999754321 379999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 2345679999999999999999999987643221 1122333455677777777642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5777899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 899988875
No 393
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.3e-33 Score=358.72 Aligned_cols=207 Identities=24% Similarity=0.357 Sum_probs=170.7
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1389)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+ .|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFN-RS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCccccc-cc
Confidence 5899999999999999999999999999999999999997 9999999999887653 468999999999886 69
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
++|||.++.. +.+.++..+++...+ .+..+ -.|++..||.+|+. ++
T Consensus 425 i~~Ni~~~~~-------------------------~~~d~~i~~al~~~~------l~~~i--~~lp~gldt~i~~~-g~ 470 (588)
T PRK13657 425 IEDNIRVGRP-------------------------DATDEEMRAAAERAQ------AHDFI--ERKPDGYDTVVGER-GR 470 (588)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHH--HhCcccccchhcCC-CC
Confidence 9999987521 001111111111111 11111 23678889999873 56
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
.||||||||++|||||+++|+|++||||||+||+.++..+.+.|++..+ ++|+|+..|++ +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~--~~tvIiitHr~--~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMK--GRTTFIIAHRL--STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEEecH--HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999988753 68888888876 5678899999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
++..|+++++++
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999999864
No 394
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=322.21 Aligned_cols=219 Identities=25% Similarity=0.301 Sum_probs=176.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.+.++|+++.++ .+.+|+|||++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 468888887653 34699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000615 931 YPKNQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1389)
Q Consensus 931 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1389)
.+... ...++.++|++|++.+++ .|++||+.+...... ....++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234677999999998887 899999987643221 12333444556788999998653221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999976 57788999999985 899
Q ss_pred EEecCC
Q 000615 1087 IYAGPL 1092 (1389)
Q Consensus 1087 ~~~g~~ 1092 (1389)
++.|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998875
No 395
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=321.37 Aligned_cols=204 Identities=25% Similarity=0.330 Sum_probs=169.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCC------C---CcCceEEEecCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE------F---VPQRTCAYISQHD 254 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d 254 (1389)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 35999999999999999999999999999999999999887 8999999997631 0 1135799999999
Q ss_pred CCCCCCCHHHHHHHhh-hccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccc
Q 000615 255 LHHGEMTVRETLDFSG-RCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1389)
Q Consensus 255 ~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 333 (1389)
.+++.+||+||+.+.. ...+.. .. + ....++..++.+||++..++
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLS----------KD----------Q--------------ALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhC
Confidence 9999999999997531 111100 00 0 01135667889999887888
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++.|++ .++.+++|+
T Consensus 138 ~~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sh~~-~~~~~~~d~ 210 (242)
T PRK11124 138 FPLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVTHEV-EVARKTASR 210 (242)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCE
Confidence 7765 999999999999999999999999999999999999999999999865 467777776665 477789999
Q ss_pred EEEEcCCeEEEecChhHH
Q 000615 414 IILLSEGQIVYQGPRDNV 431 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~ 431 (1389)
+++|.+|+++++|+++++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 396
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=319.55 Aligned_cols=209 Identities=24% Similarity=0.329 Sum_probs=168.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCCC---cCceEEEecCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFV---PQRTCAYISQHDLHHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 258 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35999999999999999999999999999999999998741 124899999999875432 2457999999998888
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccccc
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADTM 334 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~dt~ 334 (1389)
.+||+||+.++.+...... +..+ ....++..++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVK------------------SKKE--------------LQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccC------------------CHHH--------------HHHHHHHHHHHcCCCcchhhhhcCC
Confidence 9999999988643211000 0000 0112456788888853 35666
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+|
T Consensus 144 ~~~-----LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d~i 215 (250)
T PRK14247 144 AGK-----LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--DMTIVLVTHFP-QQAARISDYV 215 (250)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhcCEE
Confidence 655 999999999999999999999999999999999999999999999853 56777766655 4778899999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000615 415 ILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1389)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999998774
No 397
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.49 Aligned_cols=215 Identities=25% Similarity=0.308 Sum_probs=173.1
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 932 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~- 932 (1389)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 367888876542 24699999999999999999999999999999999997653 47999999986
Q ss_pred ----CCh---hh----hhheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-ccccc
Q 000615 933 ----KNQ---ET----FARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSM 998 (1389)
Q Consensus 933 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 998 (1389)
+.. .. .++.++|++|++. +.+.+|+.||+.+...... .....+....+.++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 432 11 2346999999974 5677899999876432111 1112234456789999999963 44544
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeE
Q 000615 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1077 (1389)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~ 1077 (1389)
+..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999976 466689999
Q ss_pred EEEecCcEEEEecCC
Q 000615 1078 LLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1078 l~l~~gG~~~~~g~~ 1092 (1389)
++|.+ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899998875
No 398
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=324.14 Aligned_cols=210 Identities=22% Similarity=0.349 Sum_probs=173.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 46999999999999999999999999999999999999887 8999999998765332 35699999999998899
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+||+.++..-.. + .. . ... + .....++.+++.+||++..++.+.+
T Consensus 97 tv~~~~~~~~~~~~-~----~~----------~-~~~-~-------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (265)
T PRK10253 97 TVQELVARGRYPHQ-P----LF----------T-RWR-K-------------EDEEAVTKAMQATGITHLADQSVDT--- 143 (265)
T ss_pred cHHHHHHhCccccc-c----cc----------c-CCC-H-------------HHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987521000 0 00 0 000 0 0011346688899998877887766
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|
T Consensus 144 --LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~-~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 144 --LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDL-NQACRYASHLIALREG 220 (265)
T ss_pred --CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764467777776655 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 399
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=354.39 Aligned_cols=219 Identities=26% Similarity=0.329 Sum_probs=180.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSF-------------GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEc-------------CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 36778877654 234699999999999999999999999999999999997653 479999999875
Q ss_pred Chh----hhhheeeEeccCCCCCCCCCHHHHHHHHHHhh----cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLR----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
... ..++.++|++|++.+++.+||+||+.+..... .......++..++++++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 321 12346999999999999999999998753211 0000122334466889999999988777764 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
.|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||++||+++ ++...||++++|.+ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999976 56778999999984 89
Q ss_pred EEEecCCCc
Q 000615 1086 VIYAGPLGH 1094 (1389)
Q Consensus 1086 ~~~~g~~~~ 1094 (1389)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999988654
No 400
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.1e-34 Score=311.82 Aligned_cols=187 Identities=24% Similarity=0.292 Sum_probs=156.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 91 (204)
T PRK13538 14 RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTA 91 (204)
T ss_pred EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcH
Confidence 4699999999999999999999999999999999997653 47999999987532 3355679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
.||+.+....+. . ...+.++++++.++|.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 92 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 160 (204)
T PRK13538 92 LENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQRRVALARLWLTRAPLWILDEPFTAI 160 (204)
T ss_pred HHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999988654321 1 1234588999999998777665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
|+.++..+++.|++++++|+|||++||+++ ++.+.-++++++
T Consensus 161 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 161 DKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 999999999999998877899999999975 344433444443
No 401
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.6e-33 Score=316.71 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=174.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCH
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999886 8999999998765433 3579999999999989999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+.....+.. .. + ....++.+++.++|.+..++.+++
T Consensus 90 ~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP----------KA----------K--------------IKARVEELLELVQLEGLGDRYPNQ----- 130 (237)
T ss_pred HHHHHhHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCCHhHhhCChhh-----
Confidence 99998764322110 00 0 011245678889998777877766
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000615 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~i 422 (1389)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|+|++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~-~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQ-EEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998764467888887766 477899999999999999
Q ss_pred EEecChhHHH
Q 000615 423 VYQGPRDNVL 432 (1389)
Q Consensus 423 v~~G~~~~~~ 432 (1389)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988774
No 402
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.01 Aligned_cols=216 Identities=24% Similarity=0.300 Sum_probs=173.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--------cCceEEEecCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--------PQRTCAYISQHDL 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~d~ 255 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 46999999999999999999999999999999999999875223699999999875321 1356999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
+++.+||+||+.+....... ...+. ... ..+ +....++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~---------~~~~~--~~~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP---------FWRTC--FSW-FTR--------------EQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc---------chhhh--ccc-ccH--------------HHHHHHHHHHHHcCCHHHHhCCc
Confidence 99999999999875321000 00000 000 000 01123567889999988888888
Q ss_pred cCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
++ |||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|+|+
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~-~~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQV-DYALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999999865567777777665 46789999999
Q ss_pred EEcCCeEEEecChhHH
Q 000615 416 LLSEGQIVYQGPRDNV 431 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~ 431 (1389)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 403
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.29 Aligned_cols=207 Identities=22% Similarity=0.257 Sum_probs=170.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCC--CCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL--HHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 258 (1389)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999998753221 246999999974 567
Q ss_pred CCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccccccC
Q 000615 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVGD 337 (1389)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~vg~ 337 (1389)
.+||.|++.+..+.... .... +....++.+++.+||. +..++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LEPE------------------------QREKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccC---------CCHH------------------------HHHHHHHHHHHHcCCChHHHhcCchh
Confidence 88999999875432100 0000 0011356688999994 566776665
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHL-GMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCH-HHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776655 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 404
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-33 Score=312.35 Aligned_cols=201 Identities=23% Similarity=0.300 Sum_probs=170.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++..++ ++.+|+++|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 477888876432 24699999999999999999999999999999999997653 479999999876
Q ss_pred ChhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000615 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1389)
.....++.++|++|++.+++.+|+.||+.+....+. .. ..+.++++++.++|.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543345569999999989898999999988654321 11 2234678899999987777664 479999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
|++||++++.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999986 6888999999886
No 405
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=323.11 Aligned_cols=205 Identities=27% Similarity=0.356 Sum_probs=168.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCC-C
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH-H 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~-~ 257 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.. +
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999987 99999999987421 113579999999753 4
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
...|+.||+.+.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------EA----------E--------------ITRRVDEALTLVDAQHFRHQPIQC 136 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCHhHhcCCchh
Confidence 4568999998753321110 00 0 011245678889998888887766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|++++|
T Consensus 137 -----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~vtH~-~~~~~~~~d~i~~l 209 (271)
T PRK13638 137 -----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIISSHD-IDLIYEISDAVYVL 209 (271)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999875 36777776655 45778899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998764
No 406
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=321.72 Aligned_cols=215 Identities=20% Similarity=0.273 Sum_probs=173.0
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478888876542 2469999999999999999999999999999999999532 1 13479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 2345679999999988875 99999987643221 1112233455788888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999976 5778899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 4 899998874
No 407
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=323.81 Aligned_cols=215 Identities=22% Similarity=0.320 Sum_probs=173.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1389)
.+.++|+++.++ ...+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578888876542 2359999999999999999999999999999999999632 1 02479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 86532 2345679999999988875 999999986533211 11223345678888888874 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5677899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 899988874
No 408
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=318.61 Aligned_cols=219 Identities=21% Similarity=0.276 Sum_probs=172.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.++++|+++.+. ++.+|+|+|++|++|+++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 356777776442 246999999999999999999999999999999999975421 2369999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.+... ...++.++|++|++.+++. |++||+.+....+.. . ..+..++.++++++.+++.+....... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT-T-AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC-C-hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 86532 2346779999999988875 999999887543311 1 122234557778888887532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~ 1085 (1389)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|. +|+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~-~G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL-TGD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe-CCe
Confidence 799999999999999999999999999999999999999999999985 5899999999976 5777889999997 588
Q ss_pred EEEecCC
Q 000615 1086 VIYAGPL 1092 (1389)
Q Consensus 1086 ~~~~g~~ 1092 (1389)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9988875
No 409
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.5e-34 Score=314.44 Aligned_cols=200 Identities=29% Similarity=0.431 Sum_probs=161.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCC--CCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHH--GEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 261 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999887 8999999987642 346799999998653 3489
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+....... .+. . ... .....++.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~--~~~-------------~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFR-------------R-LSK--------------ADKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc--ccc-------------C-CCH--------------HHHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999875321100 000 0 000 0012356688899998878888776
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sH~~-~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVTHDL-GLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999999876 467777776654 4788899999999886
Q ss_pred EEEec
Q 000615 422 IVYQG 426 (1389)
Q Consensus 422 iv~~G 426 (1389)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 410
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.79 Aligned_cols=209 Identities=25% Similarity=0.400 Sum_probs=171.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999886 899999999875432 235699999999888889
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||.||+.++..... ... +..+ . .....++.+++.+||++..++.+++
T Consensus 92 tv~~~i~~~~~~~~-----~~~----------~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (255)
T PRK11231 92 TVRELVAYGRSPWL-----SLW----------GRLS-A--------------EDNARVNQAMEQTRINHLADRRLTD--- 138 (255)
T ss_pred cHHHHHHhccchhh-----hhc----------cCCC-H--------------HHHHHHHHHHHHcCCHHHHcCCccc---
Confidence 99999988531000 000 0000 0 0012346678889998888888776
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|
T Consensus 139 --LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~~tiii~tH~~-~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 139 --LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QGKTVVTVLHDL-NQASRYCDHLVVLANG 214 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEECCH-HHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999999999999875 367777776655 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999988763
No 411
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=319.10 Aligned_cols=215 Identities=25% Similarity=0.290 Sum_probs=173.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 467888876542 346999999999999999999999999999999999964311 1379999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++. ||+||+.|....+.. ....+.++.+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87532 2345679999999988875 999999987544321 122334456788899888753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|.
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 689999999976 5667899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 5 899988875
No 412
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=315.67 Aligned_cols=202 Identities=23% Similarity=0.394 Sum_probs=170.5
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc-CceEEEecCCCCCCCCCCHHHHHH
Q 000615 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1389)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1389)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||.||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999887 8999999998765332 357999999999999999999998
Q ss_pred HhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCChhH
Q 000615 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1389)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1389)
+.... ... . .+ .....++.+++.+||++..|+.+.+ |||||
T Consensus 94 ~~~~~-~~~--~------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--L------NA-------------------------AQREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccC--C------CH-------------------------HHHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 000 0 00 0012356688899999888888876 99999
Q ss_pred hhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEEecC
Q 000615 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1389)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~~G~ 427 (1389)
||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSL-EDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998765567888777665 47788999999999999999999
Q ss_pred hhHHHH
Q 000615 428 RDNVLE 433 (1389)
Q Consensus 428 ~~~~~~ 433 (1389)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887753
No 413
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=318.45 Aligned_cols=215 Identities=25% Similarity=0.336 Sum_probs=172.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g 930 (1389)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 367888876542 24699999999999999999999999999999999997531 1 2579999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87531 234567999999988876 7999999876433211 112223456788999999842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999976 5677899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 889888874
No 414
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.5e-33 Score=364.16 Aligned_cols=208 Identities=25% Similarity=0.415 Sum_probs=172.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++++||+.++|+|+||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 470 ~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~-~ 545 (694)
T TIGR01846 470 PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFS-R 545 (694)
T ss_pred ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCCeehh-h
Confidence 35899999999999999999999999999999999999997 8999999999987654 468999999998886 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++.. +.+.++..+++...+ .+..+ -.|++..||.+|+. +
T Consensus 546 ti~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i--~~lp~gl~t~i~~~-g 591 (694)
T TIGR01846 546 SIRDNIALCNP-------------------------GAPFEHVIHAAKLAG------AHDFI--SELPQGYNTEVGEK-G 591 (694)
T ss_pred hHHHHHhcCCC-------------------------CCCHHHHHHHHHHcC------hHHHH--HhCcCccCcEecCC-C
Confidence 99999987421 111112222222211 11122 23678899999874 6
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
+.||||||||++||||++.+|++++||||||+||+.++..+.+.|+++. .++|+|++.|++ +....+|+|++|++|
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~itH~~--~~~~~~d~ii~l~~G 667 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVIIIAHRL--STVRACDRIIVLEKG 667 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEEEeCCh--HHHHhCCEEEEEeCC
Confidence 7799999999999999999999999999999999999999999999874 367888888876 456779999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++++|+++++++
T Consensus 668 ~i~~~g~~~~l~~ 680 (694)
T TIGR01846 668 QIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999999864
No 415
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.5e-33 Score=317.32 Aligned_cols=206 Identities=23% Similarity=0.283 Sum_probs=166.6
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC-CceeEEEECCeeCCCCCc-CceEEEecCCCC--CCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL-RASGKITYCGHELNEFVP-QRTCAYISQHDL--HHGEM 260 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 260 (1389)
++|+|+|+++++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999998710 128999999998754322 257999999974 44567
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc---cccccccC
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI---CADTMVGD 337 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~---~~dt~vg~ 337 (1389)
|+.+++.+.++..+.. . ....++.+++.+||.+ ..++.+++
T Consensus 97 ~~~~~~~~~~~~~~~~---------------------~---------------~~~~~~~~l~~~~l~~~~~~~~~~~~~ 140 (254)
T PRK10418 97 TMHTHARETCLALGKP---------------------A---------------DDATLTAALEAVGLENAARVLKLYPFE 140 (254)
T ss_pred cHHHHHHHHHHHcCCC---------------------h---------------HHHHHHHHHHHcCCCChhhhhhcCCcc
Confidence 9999986643211100 0 0113456788899976 35666655
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|
T Consensus 141 -----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~-~~~~~~~d~v~~l 214 (254)
T PRK10418 141 -----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDM-GVVARLADDVAVM 214 (254)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776654 4677899999999
Q ss_pred cCCeEEEecChhHHH
Q 000615 418 SEGQIVYQGPRDNVL 432 (1389)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1389)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999998764
No 416
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.70 Aligned_cols=209 Identities=21% Similarity=0.339 Sum_probs=167.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCC--C---CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNE--F---VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++.. . ..++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 35999999999999999999999999999999999998762 1238999999998752 1 123579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 332 (1389)
++.+||.||+.++....+... +..+ ....++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 144 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVK------------------SKKE--------------LDERVEWALKKAALWDEVKDRLN 144 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccC------------------CHHH--------------HHHHHHHHHHHcCCccchhhhhc
Confidence 999999999987643211000 0000 0112455677778742 345
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 145 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d 216 (253)
T PRK14267 145 DYPSN-----LSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVTHSP-AQAARVSD 216 (253)
T ss_pred cChhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEECCH-HHHHhhCC
Confidence 55544 999999999999999999999999999999999999999999999864 46777776655 47788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|++++.|+++++.
T Consensus 217 ~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 217 YVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998764
No 417
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=320.59 Aligned_cols=206 Identities=20% Similarity=0.262 Sum_probs=168.8
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--c-eEEEEEEEcCccCCh-----hhhhheeeEeccCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDI 950 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 950 (1389)
++.+|+|+|+++++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 45799999999999999999999999999999999997542 1 247999999987532 234567999999988
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 951 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
++ .+|+.||+.+....+. . ..+..+.++++++.++|.+..+...+ .....||||||||++|||||+.+|++|+|
T Consensus 100 ~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 173 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLLL 173 (261)
T ss_pred cc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 77 5999999988754332 1 12234568899999998643322221 12467999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe-------cCcEEEEecCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-------RGGRVIYAGPL 1092 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~-------~gG~~~~~g~~ 1092 (1389)
||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|. ++|++++.|+.
T Consensus 174 DEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 174 DEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999986 4799999999986 5778899999996 46899999875
No 418
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.9e-33 Score=352.00 Aligned_cols=209 Identities=25% Similarity=0.402 Sum_probs=170.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+++.
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~- 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPG- 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCcccccc-
Confidence 35899999999999999999999999999999999999987 9999999999876543 4689999999998875
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++||+.++... .+.++..+++...+ .+..++ .|++..||.+|+ .+
T Consensus 407 ti~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~------~~~~i~--~l~~gl~t~~~~-~g 452 (544)
T TIGR01842 407 TVAENIARFGEN-------------------------ADPEKIIEAAKLAG------VHELIL--RLPDGYDTVIGP-GG 452 (544)
T ss_pred cHHHHHhccCCC-------------------------CCHHHHHHHHHHhC------hHHHHH--hCccccccccCC-Cc
Confidence 999999753210 00111111211111 122333 356778899986 46
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
+.||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+|++.|++. ..+.+|+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~ith~~~--~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVITHRPS--LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEEeCCHH--HHHhCCEEEEEECC
Confidence 77999999999999999999999999999999999999999999998753 3678888888764 56789999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
++++.|+++++.+
T Consensus 530 ~i~~~g~~~~l~~ 542 (544)
T TIGR01842 530 RIARFGERDEVLA 542 (544)
T ss_pred EEEeeCCHHHHhh
Confidence 9999999988753
No 419
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=317.99 Aligned_cols=207 Identities=19% Similarity=0.320 Sum_probs=164.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 358999999999999999999999999999999999986 3222489999999987531 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 332 (1389)
++. ||+||+.|..+..+... +. + ....++.+++.+||.+ ..+
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~l~ 150 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKN---------KK----------K--------------LQEIVEKSLKDVALWDEVKDRLH 150 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCchhhhhhhh
Confidence 875 99999987643221000 00 0 0112445677778753 234
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|
T Consensus 151 ~~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~d 222 (259)
T PRK14274 151 TQAL-----SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KYTIVIVTHNM-QQAARVSD 222 (259)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEEcCH-HHHHHhCC
Confidence 5554 4999999999999999999999999999999999999999999999864 56777777665 47788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
++++|++|+++.+|+++++.
T Consensus 223 ~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 223 QTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEEECCEEEEECCHHHHh
Confidence 99999999999999998874
No 420
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.6e-33 Score=316.68 Aligned_cols=213 Identities=25% Similarity=0.305 Sum_probs=169.0
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCc--CCCCCceeEEEECCeeCCCCCc----CceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 257 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 555 8999999998765432 23489999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVG 336 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~vg 336 (1389)
+.+|++|++.+........ . .+ .. .+.+ +....++.+++.+||+ ...++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~---------~-~~-----~~-~~~~-----------~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSA---------R-GE-----EP-LDLL-----------DFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcc---------c-cc-----cc-ccHH-----------HHHHHHHHHHHHcCCchhhcccccc
Confidence 9999999998753321100 0 00 00 0000 0112356788899997 45666664
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhh-cCeEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL-FDDII 415 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~-~D~ii 415 (1389)
. .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++... +|+++
T Consensus 143 ~----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~vsH~~-~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 E----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PDRSFLIITHYQ-RLLNYIKPDYVH 216 (243)
T ss_pred c----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCcEEEEEEecH-HHHHhhcCCeEE
Confidence 1 3999999999999999999999999999999999999999999999875 467887777665 466677 79999
Q ss_pred EEcCCeEEEecChhHHH
Q 000615 416 LLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 421
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=327.27 Aligned_cols=214 Identities=17% Similarity=0.196 Sum_probs=169.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-CCceeEEEECCeeCCCCCc-------CceEEEecCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1389)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++. ...+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 56999999999999999999999999999999999998641 1238999999998865432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhccCC-cchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc---
Q 000615 256 --HHGEMTVRETLDFSGRCLGV-GTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--- 329 (1389)
Q Consensus 256 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~--- 329 (1389)
+.+.+||.+++.+....... +.. ..... +....+..+++.+||++
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~----------------~~~~~-------------~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRW----------------WQRFG-------------WRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhccccc----------------cccHH-------------HHHHHHHHHHHHCCCCChHH
Confidence 57889999999753211000 000 00000 00123567899999974
Q ss_pred cccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHh
Q 000615 330 CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYD 409 (1389)
Q Consensus 330 ~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~ 409 (1389)
..++.+.+ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|++.| ....+.+
T Consensus 151 ~~~~~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itH-dl~~v~~ 224 (330)
T PRK15093 151 AMRSFPYE-----LTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISH-DLQMLSQ 224 (330)
T ss_pred HHhCCchh-----CCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEEC-CHHHHHH
Confidence 34555554 99999999999999999999999999999999999999999999998755677666654 5568889
Q ss_pred hcCeEEEEcCCeEEEecChhHHH
Q 000615 410 LFDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 410 ~~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
++|+|++|++|+|++.|+.+++.
T Consensus 225 ~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 225 WADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999998874
No 422
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=322.81 Aligned_cols=214 Identities=24% Similarity=0.315 Sum_probs=172.4
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.++++|+++.+. ++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 578888876542 24699999999999999999999999999999999997531 12479999999
Q ss_pred ccCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+.. ....++.++|++|++.+++. ||.||+.+....+. ... ...+.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 8753 12456789999999888875 99999987654331 112 23456889999999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..|||||||||+||++|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|+++++.
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999976 5667899976543
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
++|+++..|+.
T Consensus 254 ~~G~i~~~g~~ 264 (285)
T PRK14254 254 TGGELVEFDDT 264 (285)
T ss_pred eCCEEEEeCCH
Confidence 35899988874
No 423
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.8e-33 Score=320.16 Aligned_cols=209 Identities=28% Similarity=0.415 Sum_probs=171.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
..+|+|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999887 8999999998765432 34699999998778889
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+||+.++..... .. ... +..+ ....++..++.+||.+..++.+++
T Consensus 91 tv~e~l~~~~~~~~---------~~------~~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SL------WAG-DSPH--------------DAAVVDRALARTELSHLADRDMST--- 137 (256)
T ss_pred CHHHHHHhcchhhh---------hh------ccC-CCHH--------------HHHHHHHHHHHcCcHhhhcCCccc---
Confidence 99999987521000 00 000 0000 011346678889998878888776
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++ .++.+++|+|++|++|
T Consensus 138 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 138 --LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TGVTVVAALHDL-NLAASYCDHVVVLDGG 213 (256)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999875 367777776665 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000615 421 QIVYQGPRDNVL 432 (1389)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1389)
+++..|+.+++.
T Consensus 214 ~i~~~g~~~~~~ 225 (256)
T TIGR03873 214 RVVAAGPPREVL 225 (256)
T ss_pred CEEEecCHHHhh
Confidence 999999988763
No 424
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=326.79 Aligned_cols=206 Identities=19% Similarity=0.313 Sum_probs=167.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCC----C----CcCceEEEecCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----F----VPQRTCAYISQHDL 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~ 255 (1389)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35999999999999999999999999999999999999887 8999999998742 1 12457999999973
Q ss_pred -CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-ccccc
Q 000615 256 -HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1389)
Q Consensus 256 -~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 333 (1389)
.+...||+||+.|+....+.. .. + ....++.+++.++|+ +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN----------KQ----------E--------------AYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhHhcC
Confidence 233469999998853321100 00 0 011245678889995 56777
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..++|+|++.|++ .++.+++|+
T Consensus 147 ~~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~-~~~~~~~d~ 220 (289)
T PRK13645 147 SPFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNM-DQVLRIADE 220 (289)
T ss_pred Chhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCE
Confidence 7766 9999999999999999999999999999999999999999999998765567777776654 478899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 425
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.63 Aligned_cols=224 Identities=25% Similarity=0.350 Sum_probs=177.2
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1389)
++++|+++.++... ..+ +..++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 56777776543100 000 0013569999999999999999999999999999999999755 35799999998653
Q ss_pred h------hhhhheeeEeccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000615 935 Q------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1389)
Q Consensus 935 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1389)
. ...++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3567899999987643211 1122344455689999999996 455554 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
.||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|. +|
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NG 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CC
Confidence 79999999999999999999999999999999999999999999998765 899999999976 5667899999997 58
Q ss_pred EEEEecCCC
Q 000615 1085 RVIYAGPLG 1093 (1389)
Q Consensus 1085 ~~~~~g~~~ 1093 (1389)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999998864
No 426
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1e-33 Score=307.66 Aligned_cols=178 Identities=25% Similarity=0.325 Sum_probs=150.2
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hhhhheeeEeccCCC-CCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDI-HSP 953 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 953 (1389)
+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 4699999999999999999999999999999999997653 47999999987531 234567999999973 333
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 954 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
..||+||+.+..... ....++..+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865322 1233344556889999999988777763 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1067 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1067 (1389)
|+|||+.++..+.+.|++++++|+|||++||+++
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999864
No 427
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-33 Score=350.41 Aligned_cols=208 Identities=22% Similarity=0.337 Sum_probs=172.6
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChh----hhhheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.+.... ..++.+|||+|++.+++.+
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 93 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPEL 93 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCCC
Confidence 469999999999999999999999999999999999765322479999999875421 1235699999999999999
Q ss_pred CHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000615 956 TVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLN-DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1389)
Q Consensus 956 Tv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1389)
||.||+.+....+... ....++..++++++++.+++.+.. +.. +..|||||||||+||++|+.+|+|||||||
T Consensus 94 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllLDEP 168 (500)
T TIGR02633 94 SVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLILDEP 168 (500)
T ss_pred cHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 9999998764332111 112333445688999999997654 343 347999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
|+|||+.+...+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+..+
T Consensus 169 t~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 169 SSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 9999999999999999999888999999999976 57778999999985 78998887654
No 428
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=317.41 Aligned_cols=206 Identities=20% Similarity=0.290 Sum_probs=164.1
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1389)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2112389999999987431 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----ccccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~dt 333 (1389)
+ .||+||+.++........ .. + ....++.+++.+||. +..++
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------RA----------E--------------MDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCChhhHHHHhc
Confidence 7 899999987643210000 00 0 011245677788874 33455
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 153 ~~~~-----LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~~tiii~sH~~-~~~~~~~d~ 224 (260)
T PRK10744 153 SGYS-----LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--DYTVVIVTHNM-QQAARCSDY 224 (260)
T ss_pred CCCC-----CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCCE
Confidence 5544 999999999999999999999999999999999999999999999853 56777766654 477889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
+++|++|+++..|+.+++.
T Consensus 225 i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 225 TAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 429
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=322.38 Aligned_cols=218 Identities=23% Similarity=0.395 Sum_probs=172.7
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 477888876542 12469999999999999999999999999999999999765 3479999999876
Q ss_pred ChhhhhheeeEeccCCCCC--CCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000615 934 NQETFARVSGYCEQNDIHS--PYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1389)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1389)
.....++.++|++|++.+. ...+++|++.+....... .........+.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234699999997653 234788888653211000 01111223445788999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999976 577889998666 4 8999988
Q ss_pred CCC
Q 000615 1091 PLG 1093 (1389)
Q Consensus 1091 ~~~ 1093 (1389)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 764
No 430
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.3e-34 Score=310.50 Aligned_cols=184 Identities=28% Similarity=0.336 Sum_probs=158.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 4699999999999999999999999999999999997653 47999999987532 3456779999999988889999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
+||+.+.... . .++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999875311 1 234578999999998777665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
|+.++..+++.|+++.++|+|||++||++. +....+++++++
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998877999999999975 677788888776
No 431
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=316.22 Aligned_cols=215 Identities=23% Similarity=0.317 Sum_probs=171.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1389)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 467888876542 2469999999999999999999999999999999999642 11 2479999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1389)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999998887 6999999886543321 112222345677888887642 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 589999999986 5778899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+|+++..|+.
T Consensus 222 -~G~i~~~~~~ 231 (252)
T PRK14255 222 -TGNLIEFADT 231 (252)
T ss_pred -CCEEEEeCCH
Confidence 4899888864
No 432
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1e-33 Score=313.48 Aligned_cols=195 Identities=25% Similarity=0.361 Sum_probs=162.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHHG 258 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 258 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 46999999999999999999999999999999999999887 99999999987421 12467999999999999
Q ss_pred CCCHHHHHHHhhh-ccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 259 EMTVRETLDFSGR-CLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 259 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
.+||+||+.++.. .++.. .. +....++.+++.+||++..++.+.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 135 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------KA------------------------EAEERALELLEKVGLADKADAYPAQ 135 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHhHhhhCccc
Confidence 9999999987532 11000 00 0011345678889998878888766
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|+|++|
T Consensus 136 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sh~-~~~~~~~~d~i~~l 208 (213)
T cd03262 136 -----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMVVVTHE-MGFAREVADRVIFM 208 (213)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999876 46777776655 45788899999999
Q ss_pred cCCeE
Q 000615 418 SEGQI 422 (1389)
Q Consensus 418 ~~G~i 422 (1389)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 433
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.7e-33 Score=316.79 Aligned_cols=197 Identities=26% Similarity=0.368 Sum_probs=167.8
Q ss_pred eeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhhheeeEeccCCCCCCCCCHH
Q 000615 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVY 958 (1389)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1389)
+|+|||+++++||+++|+|+||||||||+++|+|... .+|+|.++|.+... ...++.++|++|++.+++.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 27999999987532 23445689999998888889999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCCceee
Q 000615 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1031 (1389)
Q Consensus 959 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~-------~p~illLD 1031 (1389)
||+.+.... ....++..+.++++++.++|.+..+.. +..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112233345688999999998776665 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999976 57788999999985 899998875
No 434
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=319.83 Aligned_cols=215 Identities=20% Similarity=0.269 Sum_probs=173.3
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 929 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~ 929 (1389)
..+.++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|.... + +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3578888887542 24699999999999999999999999999999999996431 1 247999999
Q ss_pred CccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000615 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1389)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1389)
|.+... ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.+++.++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987531 2346779999999888775 99999987643321 11 122344677888888742 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEE
Q 000615 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1389)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l 1080 (1389)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999986 577889999999
Q ss_pred e--------cCcEEEEecCC
Q 000615 1081 K--------RGGRVIYAGPL 1092 (1389)
Q Consensus 1081 ~--------~gG~~~~~g~~ 1092 (1389)
+ +.|++++.|+.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred ecccccccccCceEEEeCCH
Confidence 7 25899999986
No 435
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.6e-33 Score=355.74 Aligned_cols=209 Identities=25% Similarity=0.404 Sum_probs=171.5
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|+++++|+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 345 ~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 420 (571)
T TIGR02203 345 RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVVLFN-D 420 (571)
T ss_pred CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCccccc-c
Confidence 35899999999999999999999999999999999999997 8999999999876653 467999999998885 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++... +.+.++..+++...+ .+..+ -.|++..||.+|+. +
T Consensus 421 Ti~~Ni~~~~~~------------------------~~~~~~i~~~l~~~~------l~~~i--~~lp~gldt~i~~~-g 467 (571)
T TIGR02203 421 TIANNIAYGRTE------------------------QADRAEIERALAAAY------AQDFV--DKLPLGLDTPIGEN-G 467 (571)
T ss_pred cHHHHHhcCCCC------------------------CCCHHHHHHHHHHcC------hHHHH--HhCcCcccceecCC-C
Confidence 999999875210 011111112211111 11111 23677899999974 6
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
+.||||||||++||||++.+|+|++||||||+||+.++..+.+.|++..+ ++|+|+..|++ +..+.||+|++|++|
T Consensus 468 ~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~--~~tiIiitH~~--~~~~~~D~ii~l~~g 543 (571)
T TIGR02203 468 VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQ--GRTTLVIAHRL--STIEKADRIVVMDDG 543 (571)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhC--CCEEEEEehhh--HHHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999998753 67888888876 678899999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++..|+++++.+
T Consensus 544 ~i~~~g~~~~l~~ 556 (571)
T TIGR02203 544 RIVERGTHNELLA 556 (571)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999864
No 436
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-33 Score=309.77 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=172.8
Q ss_pred cceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC-C-CCCceeEEEECCeeCCCCCc-------CceEEEecCC
Q 000615 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG-K-DLRASGKITYCGHELNEFVP-------QRTCAYISQH 253 (1389)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 253 (1389)
..++++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.... .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 34567999999998755442 2579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccc
Q 000615 254 D--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA 331 (1389)
Q Consensus 254 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~ 331 (1389)
+ .+.|.+||.+.+.-..+...... . ..+....+..+|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~------------------------~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------S------------------------KKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------h------------------------hHHHHHHHHHHHHHcCCCCHH
Confidence 5 67888999998865433211000 0 011223456788999998532
Q ss_pred cccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhc
Q 000615 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1389)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 411 (1389)
. +-+.+...|||||||||.||.||+.+|++|+.||||++||..++.+|++.|+++.++.+.+ ++.++|...-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~a-iilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTA-LILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHhc
Confidence 1 1223445599999999999999999999999999999999999999999999999865555 455566777899999
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000615 412 DDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 412 D~iilL~~G~iv~~G~~~~~~ 432 (1389)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 437
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.9e-33 Score=350.29 Aligned_cols=212 Identities=21% Similarity=0.322 Sum_probs=179.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367888876542 34699999999999999999999999999999999997653 479999999875
Q ss_pred Ch---hhh-hheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQ---ETF-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~---~~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.. ... ++.+||++|++.+++.+||+|++.|.... .++.++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 32 122 24589999999999999999999875311 1233456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999976 56788999999985 899999
Q ss_pred cCCCc
Q 000615 1090 GPLGH 1094 (1389)
Q Consensus 1090 g~~~~ 1094 (1389)
|+..+
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 88653
No 438
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=319.11 Aligned_cols=208 Identities=20% Similarity=0.308 Sum_probs=165.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.+++. ...+|+|+++|+++... ..++.++|++|++.+
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998641 11389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 332 (1389)
++. ||.||+.|+....+... .+ .+ ....++.+++.+||.+ ..+
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~--------~~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 158 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLAR--------SK----------AE--------------LDEIVETSLRKAGLWEEVKDRLH 158 (267)
T ss_pred CCC-cHHHHHHHHHHhccccc--------ch----------HH--------------HHHHHHHHHHHcCCchhhhHHhh
Confidence 874 99999988643221100 00 00 0112456788888864 234
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 159 ~~~~~-----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~tiiivtH~~-~~~~~~~d 230 (267)
T PRK14235 159 EPGTG-----LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NYTIVIVTHSM-QQAARVSQ 230 (267)
T ss_pred CCccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CCeEEEEEcCH-HHHHhhCC
Confidence 55544 999999999999999999999999999999999999999999999864 56777766654 57788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
++++|++|+++.+|+.+++.
T Consensus 231 ~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 231 RTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 439
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.1e-33 Score=309.43 Aligned_cols=199 Identities=22% Similarity=0.287 Sum_probs=166.1
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-cCceEEEecCCCCCCCCCCHHH
Q 000615 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTVRE 264 (1389)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 264 (1389)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999987 999999999875432 2467999999999999999999
Q ss_pred HHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccCCC
Q 000615 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1389)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rGLS 344 (1389)
|+.+...... . ... .....++.+++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~-~-------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-K-------------------LNA--------------EQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccC-C-------------------ccH--------------HHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 9986432100 0 000 0012345678899998888888766 99
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000615 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1389)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~iv~ 424 (1389)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~-~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHL-SDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998765467777766654 57788999999999999998
Q ss_pred ecC
Q 000615 425 QGP 427 (1389)
Q Consensus 425 ~G~ 427 (1389)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 440
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.3e-33 Score=352.80 Aligned_cols=208 Identities=25% Similarity=0.357 Sum_probs=170.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|+ .
T Consensus 328 ~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~ 403 (569)
T PRK10789 328 HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS-D 403 (569)
T ss_pred CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccCCeecc-c
Confidence 35899999999999999999999999999999999999997 9999999999876543 467999999998886 5
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++... .+.++..+++...+. .+ ....|++..||.+|+. +
T Consensus 404 ti~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~l-----~~---~i~~lp~gl~t~~~~~-g 449 (569)
T PRK10789 404 TVANNIALGRPD-------------------------ATQQEIEHVARLASV-----HD---DILRLPQGYDTEVGER-G 449 (569)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHcCC-----HH---HHHhCcCcccceecCC-C
Confidence 999999875211 000111111111110 01 1235788899999873 5
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++. .++|+|++.|++ +..+.+|+|++|++|
T Consensus 450 ~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~itH~~--~~~~~~d~i~~l~~G 525 (569)
T PRK10789 450 VMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIISAHRL--SALTEASEILVMQHG 525 (569)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--hHHHcCCEEEEEeCC
Confidence 6799999999999999999999999999999999999999999999875 368888888876 456789999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++.+|+++++.+
T Consensus 526 ~i~~~g~~~~l~~ 538 (569)
T PRK10789 526 HIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEecCHHHHHH
Confidence 9999999998864
No 441
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=319.60 Aligned_cols=215 Identities=22% Similarity=0.240 Sum_probs=171.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1389)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 478889887542 2359999999999999999999999999999999999653 1 13579999999
Q ss_pred ccCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000615 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1389)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1389)
.+.. ...+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 8753 1234667999999998877 499999988653321 111222344567777777543 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 799999999976 5677899999998
Q ss_pred cCcEEEEecCC
Q 000615 1082 RGGRVIYAGPL 1092 (1389)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1389)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 899988874
No 442
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.2e-33 Score=313.02 Aligned_cols=209 Identities=22% Similarity=0.363 Sum_probs=167.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 477888876542 3469999999999999999999999999999999999754 3479999999865
Q ss_pred Ch---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000615 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSg 1009 (1389)
.. ...++.++|++|++.+++ .|++||+.+....+.. .. ..+.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567999999988877 4999999875433221 11 124578899999995 355554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~ 1088 (1389)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998754 899999999976 34 57999999964333333
Q ss_pred ec
Q 000615 1089 AG 1090 (1389)
Q Consensus 1089 ~g 1090 (1389)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 443
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=349.61 Aligned_cols=207 Identities=26% Similarity=0.335 Sum_probs=173.8
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCCCCCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~ 954 (1389)
++.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35699999999999999999999999999999999997653 47999999987532 2235679999999988899
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
+||+||+.+............++..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|||||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999987532111111123334456889999999987777663 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
+|||+.++..+.+.|+++++.|+|||++||+++ ++.+.||++++|.+ |+++..|+...
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 999999999999999999888999999999976 57778999999985 89999988654
No 444
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-33 Score=321.91 Aligned_cols=211 Identities=22% Similarity=0.303 Sum_probs=172.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3678888876531 12359999999999999999999999999999999999764 369999999875
Q ss_pred Ch---hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000615 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGL------PGV 1004 (1389)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~------~~~ 1004 (1389)
.. ..+++.++||+|++.+++. |++||+.... ... ++.++++++.++|.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 32 3456789999999998874 9999995321 111 23467888999998766554321 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ ....||++++|. +|
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~-~G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIE-EN 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEec-CC
Confidence 5699999999999999999999999999999999999999999999875 4899999999975 345699999997 48
Q ss_pred EEEEecCCC
Q 000615 1085 RVIYAGPLG 1093 (1389)
Q Consensus 1085 ~~~~~g~~~ 1093 (1389)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 999999864
No 445
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=348.89 Aligned_cols=216 Identities=29% Similarity=0.353 Sum_probs=178.2
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 367778776542 34699999999999999999999999999999999997653 479999999875
Q ss_pred Ch----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000615 934 NQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1389)
Q Consensus 934 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1389)
.. ...++.+||++|++.+++.+||.||+.+....+........+..+.++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 224567999999999999999999998853211111112334456788999999998766665 357999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEe
Q 000615 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1389)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~ 1089 (1389)
||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|.+ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999985 788776
Q ss_pred cC
Q 000615 1090 GP 1091 (1389)
Q Consensus 1090 g~ 1091 (1389)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 446
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=9.6e-34 Score=318.92 Aligned_cols=196 Identities=23% Similarity=0.400 Sum_probs=154.4
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---hhhhhheeeEeccCCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.. ...+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 4599999999999999999999999999999999997653 4799999998653 2345677999999987764 69
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELV--ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1389)
|.||+.+... ........ ...++.++.+ ++....+.. +..|||||||||+|||+|+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976421 11111100 1122333333 333322332 46899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||||+|||+.++..+.+.|++++ +|+|||+++|+++ ++ +.+|++++|.+ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 56999999985 899998874
No 447
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=314.32 Aligned_cols=208 Identities=19% Similarity=0.282 Sum_probs=165.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---cCceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1389)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++....+|+|.++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 46999999999999999999999999999999999997531123899999999886542 2457999999998887 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccccccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADTMVG 336 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~dt~vg 336 (1389)
||+||+.++...++... +... ....++.+++.+||.. ..+..+
T Consensus 94 tv~eni~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~~- 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIK------------------NKDE--------------EEALVVDCLQKVGLFEEVKDKLKQNA- 140 (246)
T ss_pred cHHHHhhhHHhhcCccc------------------ChHH--------------HHHHHHHHHHHcCCChhhhHHhcCCc-
Confidence 99999988643221000 0000 0112456788888853 233433
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|++++.|++ .++.+++|+|++
T Consensus 141 ----~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d~i~~ 213 (246)
T PRK14269 141 ----LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--NLSMIMVTHNM-QQGKRVADYTAF 213 (246)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecCH-HHHHhhCcEEEE
Confidence 45999999999999999999999999999999999999999999999854 66777766654 578889999999
Q ss_pred EcCCeEEEecChhHHH
Q 000615 417 LSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1389)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 214 FHLGELIEFGESKEFF 229 (246)
T ss_pred EECCEEEEECCHHHHH
Confidence 9999999999988764
No 448
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6e-33 Score=315.37 Aligned_cols=220 Identities=24% Similarity=0.303 Sum_probs=173.3
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 367888876542 2469999999999999999999999999999999999621113579999999875
Q ss_pred Ch---hhhhh-eeeEeccCCCCCCCCCHHHHHHHHHHhhcC----CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000615 934 NQ---ETFAR-VSGYCEQNDIHSPYVTVYESLLYSAWLRLS----SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1389)
Q Consensus 934 ~~---~~~~~-~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1389)
.. ...++ .++|++|++.+++.+|+.|++.+....... .+....+..+.+.++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 42 12222 478999999999999999998775432110 1111223345678899999996 35555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hCeEEEEecC
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRG 1083 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~l~l~~g 1083 (1389)
..|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~-~ 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQ-N 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEe-C
Confidence 259999999999999999999999999999999999999999999999877999999999975 34444 79999997 5
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999875
No 449
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.4e-34 Score=359.94 Aligned_cols=211 Identities=28% Similarity=0.449 Sum_probs=176.9
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|++|.++. ++.+|+|+|++++|||.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 45899999987642 35699999999999999999999999999999999997663 47999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-------LNDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~~g~~ 1002 (1389)
+. ...+|+.++||+|++.++. -||+||+.++. .+.+++ .++++++..++.+ -.|+.+|.
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge- 461 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDE----EIEEALKLANAHEFIANLPDGYDTIVGE- 461 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHH----HHHHHHHHhChHHHHHhCcccccceecC-
Confidence 54 4678899999999999988 89999999863 122332 3455555544333 35778874
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
+...||||||||++||||++++|+||+||||||+||+.++..|++.++++. +++|+++++|+++ ....+|++++|++
T Consensus 462 ~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 462 RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999887 5789999999985 4566999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 889999985
No 450
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.9e-32 Score=349.47 Aligned_cols=212 Identities=27% Similarity=0.425 Sum_probs=175.7
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++++|++|.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 46899999987641 124599999999999999999999999999999999997653 47999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
+. ...+++.++||+|++.+++ .|++||+.+.. .+.+. +.+.++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 64 3567888999999988876 59999997642 12222 335667777776543 35555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. .++|+|++||+++ ....+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 45799999999999999999999999999999999999999999999985 5899999999975 4567999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 451
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-34 Score=305.23 Aligned_cols=197 Identities=27% Similarity=0.429 Sum_probs=171.2
Q ss_pred eeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------cCceEEEecCCCCCCCCC
Q 000615 188 KDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 188 ~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~l 260 (1389)
=++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|.+|||+|+..+||++
T Consensus 15 l~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~ 91 (352)
T COG4148 15 LDANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHY 91 (352)
T ss_pred EEEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccce
Confidence 3677777775799999999999999999999999998 999999998764322 258899999999999999
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
||+-||.|+..... ....|.+...||++|..++....
T Consensus 92 tVrgNL~YG~~~~~----------------------------------------~~~fd~iv~lLGI~hLL~R~P~~--- 128 (352)
T COG4148 92 TVRGNLRYGMWKSM----------------------------------------RAQFDQLVALLGIEHLLDRYPGT--- 128 (352)
T ss_pred EEecchhhhhcccc----------------------------------------hHhHHHHHHHhCcHHHHhhCCCc---
Confidence 99999999743210 01246788899999999999887
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
|||||||||+|||||++.|++|+||||.+.||-....+++-+|++++++.+.-++. +.|-..|+.+++|+|++|++|
T Consensus 129 --LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlY-VSHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 129 --LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILY-VSHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred --cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEE-EecCHHHHHhhhheEEEecCC
Confidence 99999999999999999999999999999999999999999999999876655554 455667999999999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
++...|+.+++..
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999999853
No 452
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=317.74 Aligned_cols=218 Identities=20% Similarity=0.267 Sum_probs=172.1
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g 930 (1389)
.+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 467888876542 24699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000615 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1389)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1389)
.+.. ....++.++|++|++.+++ .||.||+.+....+. .. ...++.+.++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8652 2334667999999988887 499999987653321 11 1233456777888887431111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec---
Q 000615 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR--- 1082 (1389)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~--- 1082 (1389)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 68889999999972
Q ss_pred -----CcEEEEecCC
Q 000615 1083 -----GGRVIYAGPL 1092 (1389)
Q Consensus 1083 -----gG~~~~~g~~ 1092 (1389)
.|++++.|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 5899998875
No 453
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=314.92 Aligned_cols=207 Identities=18% Similarity=0.319 Sum_probs=165.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCCC-----cCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 256 (1389)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998641 124899999999875321 24569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++ +||+||+.|.....+... .. + ....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKD---------KK----------E--------------LDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCc---------HH----------H--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 87 899999988643221100 00 0 011244567777774 2345
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++.+ +.|+|++.|++ .++.+++|
T Consensus 143 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~tiiivsH~~-~~~~~~~d 214 (251)
T PRK14270 143 KSALK-----LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EYTIVIVTHNM-QQASRVSD 214 (251)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCeEEEEEcCH-HHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999865 46777776654 57889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998874
No 454
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=316.60 Aligned_cols=208 Identities=22% Similarity=0.333 Sum_probs=166.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 359999999999999999999999999999999999986411 1389999999987421 124579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++.+||+||+.++....+... .. + ....++.+++.+||. +..+
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVRN---------KK----------D--------------LDELVEKSLRGANLWNEVKDRLD 143 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCCC---------HH----------H--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 999999999987643211000 00 0 011345667788874 3445
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tviivsH~~-~~~~~~~d 215 (258)
T PRK14241 144 KPGGG-----LSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DYTIVIVTHNM-QQAARVSD 215 (258)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEecCH-HHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999864 46777766654 57889999
Q ss_pred eEEEEc------CCeEEEecChhHHH
Q 000615 413 DIILLS------EGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~------~G~iv~~G~~~~~~ 432 (1389)
+|++|+ +|++++.|+++++.
T Consensus 216 ~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 216 QTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEEecccCCCCceEEecCCHHHHH
Confidence 999997 79999999998874
No 455
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.5e-33 Score=351.36 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=168.9
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1389)
++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+++ .|
T Consensus 349 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~t 424 (585)
T TIGR01192 349 QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQDAGLFN-RS 424 (585)
T ss_pred ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccCCccCc-cc
Confidence 5899999999999999999999999999999999999997 9999999999876543 468999999998886 69
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
++||+.++... .+.++..+++...+. .+. ...+++..||.+|+ .+.
T Consensus 425 i~~Ni~~~~~~-------------------------~~~~~~~~a~~~~~~-----~~~---i~~l~~g~~t~~~~-~~~ 470 (585)
T TIGR01192 425 IRENIRLGREG-------------------------ATDEEVYEAAKAAAA-----HDF---ILKRSNGYDTLVGE-RGN 470 (585)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhCc-----HHH---HHhccccccchhcC-CCC
Confidence 99999875211 001111112111110 111 22366778899986 366
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++.|++ +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~--~~tvI~isH~~--~~~~~~d~i~~l~~G~ 546 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRK--NRTTFIIAHRL--STVRNADLVLFLDQGR 546 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhC--CCEEEEEEcCh--HHHHcCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998743 68888888876 4557799999999999
Q ss_pred EEEecChhHHHH
Q 000615 422 IVYQGPRDNVLE 433 (1389)
Q Consensus 422 iv~~G~~~~~~~ 433 (1389)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (585)
T TIGR01192 547 LIEKGSFQELIQ 558 (585)
T ss_pred EEEECCHHHHHH
Confidence 999999998864
No 456
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=314.46 Aligned_cols=208 Identities=21% Similarity=0.292 Sum_probs=166.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 459999999999999999999999999999999999985 3212389999999987532 124679999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 332 (1389)
++.+||+||+.++.+..+... . .+ ....++..++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------R----------SE--------------ADEIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------H----------HH--------------HHHHHHHHHHHcCCchhhhHHhh
Confidence 999999999987533211000 0 00 0112456777888753 234
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~~tiiivsH~~-~~~~~~~d 215 (252)
T PRK14256 144 SNAME-----LSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--KYTIIIVTHNM-QQAARVSD 215 (252)
T ss_pred CCcCc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCcEEEEECCH-HHHHhhCC
Confidence 44544 999999999999999999999999999999999999999999999975 46777776654 47889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 457
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=318.24 Aligned_cols=206 Identities=18% Similarity=0.281 Sum_probs=162.2
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 359999999999999999999999999999999999986310 1389999999987421 123569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++ .||+||+.+++...+... +. ...++.+++.+++. +..|
T Consensus 106 ~~-~tv~enl~~~~~~~~~~~---------------------~~--------------~~~~~~~l~~~~l~~~l~~~~~ 149 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYTG---------------------DM--------------DELVERSLRKAAVWDECKDKLN 149 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCcH---------------------HH--------------HHHHHHHHHHhCCcchhhhhhC
Confidence 87 599999988654321100 00 01123455666653 3345
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+.+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.++||
T Consensus 150 ~~~~~-----LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~d 221 (269)
T PRK14259 150 ESGYS-----LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--NFTIVIVTHNM-QQAVRVSD 221 (269)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999854 56777666654 58889999
Q ss_pred eEEEEcC-----------CeEEEecChhHHHH
Q 000615 413 DIILLSE-----------GQIVYQGPRDNVLE 433 (1389)
Q Consensus 413 ~iilL~~-----------G~iv~~G~~~~~~~ 433 (1389)
++++|++ |++++.|+++++.+
T Consensus 222 ~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 222 MTAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEEEeccccccccccccceEEEeCCHHHHHh
Confidence 9999996 67899999988753
No 458
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=314.91 Aligned_cols=207 Identities=20% Similarity=0.285 Sum_probs=165.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35999999999999999999999999999999999998641 12389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccc----cc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC----AD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~----~d 332 (1389)
++ .||+||+.++.+..+.. ...+ ....++.+++.+||.++ .+
T Consensus 113 ~~-~tv~eni~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 113 FA-KSIYENITFALERAGVK-------------------DKKV--------------LDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCC-------------------CHHH--------------HHHHHHHHHHHcCCCchhhhhhc
Confidence 87 69999998864321100 0000 01124556778888543 34
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
..+ +.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.++||
T Consensus 159 ~~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d 230 (267)
T PRK14237 159 KSA-----LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--NYTIIIVTHNM-QQAARASD 230 (267)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEecCH-HHHHHhcC
Confidence 444 45999999999999999999999999999999999999999999999853 56777776655 47889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
++++|++|++++.|+.+++.
T Consensus 231 ~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 231 YTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999998874
No 459
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=6.5e-33 Score=315.99 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=167.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCee-----CCCCCc-------CceEEEec
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHE-----LNEFVP-------QRTCAYIS 251 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~ 251 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999887 8999999987 654322 24699999
Q ss_pred CCCC--CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc
Q 000615 252 QHDL--HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI 329 (1389)
Q Consensus 252 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~ 329 (1389)
|++. +++.+|+.||+.+.....+.. ..++ ....++.+++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGAR-------------------HYGD--------------IRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccC-------------------cHHH--------------HHHHHHHHHHHcCCCh
Confidence 9973 567789999997632110000 0000 0113456788999974
Q ss_pred -cccccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHH
Q 000615 330 -CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETY 408 (1389)
Q Consensus 330 -~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 408 (1389)
..++.+++ |||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.
T Consensus 143 ~~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~-~~~~ 216 (258)
T PRK11701 143 ARIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDL-AVAR 216 (258)
T ss_pred hHHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHHH
Confidence 56777765 9999999999999999999999999999999999999999999998765467777766654 5777
Q ss_pred hhcCeEEEEcCCeEEEecChhHHH
Q 000615 409 DLFDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 409 ~~~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
+.+|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 899999999999999999988764
No 460
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6e-33 Score=315.54 Aligned_cols=214 Identities=26% Similarity=0.310 Sum_probs=170.4
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc--
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP-- 932 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~-- 932 (1389)
++++|+++.++ .+.+|+|||++|++|++++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEeccccc
Confidence 57777776442 24589999999999999999999999999999999997653 47999999875
Q ss_pred ---CCh---hh----hhheeeEeccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccc
Q 000615 933 ---KNQ---ET----FARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMV 999 (1389)
Q Consensus 933 ---~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~ 999 (1389)
... .. .++.++|++|++. +.+.+|+.|++.+..... .. ....+..+.++++++.+++. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 321 11 2346899999975 445679999987543211 11 11123345688999999996 355554
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEE
Q 000615 1000 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1078 (1389)
Q Consensus 1000 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l 1078 (1389)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4579999999999999999999999999999999999999999999998754 899999999976 5667899999
Q ss_pred EEecCcEEEEecCC
Q 000615 1079 LLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1389)
+|.+ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 899988874
No 461
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=314.75 Aligned_cols=215 Identities=23% Similarity=0.332 Sum_probs=173.0
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--Cce--EEEEEEEcC
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GGY--IEGDIKISG 930 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g~--~~G~i~i~g 930 (1389)
+.++|+++.+ +++.+|+||||++.+||+++|+|+||||||||+++|+|... .|. +.|++.++|
T Consensus 11 i~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYI-------------NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEec-------------CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 6777776543 34569999999999999999999999999999999999644 232 236676766
Q ss_pred ccCC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 000615 931 YPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPG 1003 (1389)
Q Consensus 931 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~ 1003 (1389)
.+.. ....++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 150 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP----- 150 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----
Confidence 6542 23356779999999999999999999988643221 1122344456889999999864 23332
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|. +
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~-~ 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLY-N 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEE-C
Confidence 457999999999999999999999999999999999999999999999864 699999999976 5668899999998 4
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|+++..|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 899888875
No 462
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=314.69 Aligned_cols=206 Identities=19% Similarity=0.259 Sum_probs=164.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCc---CCCCCceeEEEECCeeCCCCC-----cCceEEEecCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL---GKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~---~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~ 255 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.. ++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 45999999999999999999999999999999999973 331 13899999999875421 2357999999988
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccc----c
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC----A 331 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~----~ 331 (1389)
+++ .||+||+.++.+..+... .+ .....++.+++.+||.+. .
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~--------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKD--------------------NA-------------FIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCc--------------------HH-------------HHHHHHHHHHHHcCCCcchhhhh
Confidence 886 699999987643221100 00 001134567888888643 3
Q ss_pred cccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhc
Q 000615 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1389)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 411 (1389)
+..++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++
T Consensus 141 ~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~ 212 (250)
T PRK14245 141 KESAF-----ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--DYTIVIVTHNM-QQAARVS 212 (250)
T ss_pred hCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHhhC
Confidence 44444 4999999999999999999999999999999999999999999999853 56777766655 4788999
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000615 412 DDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 412 D~iilL~~G~iv~~G~~~~~~ 432 (1389)
|+|++|++|+++++|+++++.
T Consensus 213 d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 213 DKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred CEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999874
No 463
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-33 Score=359.55 Aligned_cols=210 Identities=24% Similarity=0.351 Sum_probs=177.8
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46899999987641 13599999999999999999999999999999999998664 47999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1389)
++ ...+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 45678899999999999886 9999998752 122 23478888888876543 4555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
..+||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|||+++|+++ ....+|++++|+
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~- 548 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLH- 548 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEE-
Confidence 357999999999999999999999999999999999999999999999864 799999999974 567899999998
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
+|+++..|+.
T Consensus 549 ~G~i~~~G~~ 558 (592)
T PRK10790 549 RGQAVEQGTH 558 (592)
T ss_pred CCEEEEEcCH
Confidence 5899999985
No 464
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-34 Score=284.09 Aligned_cols=208 Identities=22% Similarity=0.321 Sum_probs=175.3
Q ss_pred cccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC-------------Ch---hhh
Q 000615 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK-------------NQ---ETF 938 (1389)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~-------------~~---~~~ 938 (1389)
+.++...+|++||+..+.|+++.|+|.|||||||+|++|.-..+ +..|.|.+||..+ +. ..+
T Consensus 14 K~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~ 91 (256)
T COG4598 14 KRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRL 91 (256)
T ss_pred hhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHH
Confidence 34567889999999999999999999999999999999987655 3479999998642 11 124
Q ss_pred hheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHH
Q 000615 939 ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIA 1018 (1389)
Q Consensus 939 ~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia 1018 (1389)
|...|+|+|+..++..+||.||+.-.-.-- ...++.+..++.+..|..+|+.+.+|.. +..|||||+||++||
T Consensus 92 Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~Y-----P~~LSGGQQQR~aIA 164 (256)
T COG4598 92 RTRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAY-----PAHLSGGQQQRVAIA 164 (256)
T ss_pred HHHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcC-----ccccCchHHHHHHHH
Confidence 456899999999999999999997543211 1345566677889999999999988876 347999999999999
Q ss_pred HHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCC
Q 000615 1019 VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1389)
Q Consensus 1019 ~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~ 1093 (1389)
|||+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||.+.. .-+...+++.|. .|.+.+.||+.
T Consensus 165 RaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh-~G~iEE~G~P~ 237 (256)
T COG4598 165 RALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLH-QGKIEEEGPPE 237 (256)
T ss_pred HHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEee-cceecccCChH
Confidence 99999999999999999999999999999999999999999999998653 445567888887 48999999973
No 465
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-33 Score=313.99 Aligned_cols=218 Identities=22% Similarity=0.313 Sum_probs=172.9
Q ss_pred EEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCC--C-ceEEEEEEEcCc
Q 000615 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISGY 931 (1389)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g~ 931 (1389)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.
T Consensus 4 l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 56777765442 3469999999999999999999999999999999999642 1 124799999998
Q ss_pred cCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000615 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1389)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1389)
++.. ...++.++|++|++.+++. |+.||+.+...... ....+...+.+.++++.+++.+....... ..+..
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~ 146 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSALG 146 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCccc
Confidence 7532 2346779999999988875 99999987643221 11223345668889999988542211111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 000615 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1389)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~ 1086 (1389)
||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|.+ |++
T Consensus 147 LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i 223 (250)
T PRK14266 147 LSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEI 223 (250)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeE
Confidence 999999999999999999999999999999999999999999999864 899999999986 67788899999974 899
Q ss_pred EEecCC
Q 000615 1087 IYAGPL 1092 (1389)
Q Consensus 1087 ~~~g~~ 1092 (1389)
++.|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14266 224 IESGLT 229 (250)
T ss_pred EEeCCH
Confidence 998874
No 466
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-33 Score=307.95 Aligned_cols=192 Identities=29% Similarity=0.421 Sum_probs=160.9
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------cCceEEEecCCCCCCCCCC
Q 000615 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 261 (1389)
|+|+++++ ++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999887 999999998874311 2357999999999998999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
|+||+.+...... ..+ ....++..++.+||++..++.+++
T Consensus 92 ~~~~l~~~~~~~~------------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (214)
T cd03297 92 VRENLAFGLKRKR------------NRE------------------------DRISVDELLDLLGLDHLLNRYPAQ---- 131 (214)
T ss_pred HHHHHHHHHhhCC------------HHH------------------------HHHHHHHHHHHcCCHhHhhcCccc----
Confidence 9999987532100 000 011245678899998777777766
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|+
T Consensus 132 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 132 -LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDL-SEAEYLADRIVVMEDGR 209 (214)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCH-HHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999765467777766654 57788999999999999
Q ss_pred EEEec
Q 000615 422 IVYQG 426 (1389)
Q Consensus 422 iv~~G 426 (1389)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 467
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=313.59 Aligned_cols=207 Identities=18% Similarity=0.285 Sum_probs=162.3
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCCC-----cCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|..+ +....+|+|.++|+++.... .++.++|++|++.+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 113 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNP 113 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCcc
Confidence 359999999999999999999999999999999999864 11113899999999875321 24579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++. ||+||+.++....+... ... ....++..++.+++. +..+
T Consensus 114 ~~~-tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 159 (268)
T PRK14248 114 FPK-SIYNNITHALKYAGERR-------------------KSV--------------LDEIVEESLTKAALWDEVKDRLH 159 (268)
T ss_pred Ccc-cHHHHHHHHHHhcCCCc-------------------HHH--------------HHHHHHHHHHHcCCCcchHHHHh
Confidence 875 99999987532211000 000 001234456666764 2345
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ ||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|
T Consensus 160 ~~~~~-----LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d 231 (268)
T PRK14248 160 SSALS-----LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--EYSIIIVTHNM-QQALRVSD 231 (268)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEEeCH-HHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999864 46777776664 47889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|++++.|+.+++.
T Consensus 232 ~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 232 RTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 468
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=313.31 Aligned_cols=195 Identities=20% Similarity=0.290 Sum_probs=164.6
Q ss_pred ccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCH
Q 000615 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
..+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 346799999999999999999999999999999999997653 4799999984 3567777777788999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
.||+.+..... ....++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|+||+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 122344445678889999998777665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
|+.++..+.+.|+++.+.|+|||+++|++. ++.+.+|++++|. +|++++.|+..+
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 229 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELDD 229 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHHH
Confidence 999999999999998777999999999975 5677899999997 589998887543
No 469
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=313.26 Aligned_cols=207 Identities=21% Similarity=0.294 Sum_probs=163.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 359999999999999999999999999999999999853 4222389999999987432 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 332 (1389)
++ +||+||+.++....+... ... ....++.+++.+|+.. ..+
T Consensus 98 ~~-~tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKGIKD-------------------KQV--------------LDEAVEKSLKGASIWDEVKDRLH 143 (252)
T ss_pred Cc-CcHHHHHHHHHHHcCCCc-------------------HHH--------------HHHHHHHHHHHcCCchhHHHHHh
Confidence 87 899999987643221100 000 0112345667777643 234
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
..+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+.+|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d 215 (252)
T PRK14239 144 DSALG-----LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--DYTMLLVTRSM-QQASRISD 215 (252)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--CCeEEEEECCH-HHHHHhCC
Confidence 44444 999999999999999999999999999999999999999999999864 46777766654 47889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 216 RTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 470
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=6.2e-33 Score=352.45 Aligned_cols=208 Identities=24% Similarity=0.378 Sum_probs=169.8
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++..+ ++.++||+|++.+|+ .
T Consensus 353 ~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~-~ 428 (576)
T TIGR02204 353 QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQDPVLFA-A 428 (576)
T ss_pred CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEccCCcccc-c
Confidence 46999999999999999999999999999999999999987 8999999999877654 467999999998885 6
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 340 (1389)
|++|||.++... .+.++..+++...+ ....++ .+++..||.+|+. +
T Consensus 429 Ti~~Ni~~~~~~-------------------------~~~~~~~~~l~~~~------l~~~i~--~l~~gl~t~i~~~-g 474 (576)
T TIGR02204 429 SVMENIRYGRPD-------------------------ATDEEVEAAARAAH------AHEFIS--ALPEGYDTYLGER-G 474 (576)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHcC------cHHHHH--hCCCCCCceeCCC-C
Confidence 999999875211 00111112211111 111222 3567789999873 5
Q ss_pred cCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCC
Q 000615 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1389)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G 420 (1389)
+.||||||||+++|||++++|++++||||||+||+.++..+.+.|+++.+ ++|+|+..|++ +....+|+|++|++|
T Consensus 475 ~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~--~~t~IiitH~~--~~~~~~d~vi~l~~g 550 (576)
T TIGR02204 475 VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMK--GRTTLIIAHRL--ATVLKADRIVVMDQG 550 (576)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECC
Confidence 66999999999999999999999999999999999999999999998753 67888888876 566889999999999
Q ss_pred eEEEecChhHHHH
Q 000615 421 QIVYQGPRDNVLE 433 (1389)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1389)
+++..|+++++.+
T Consensus 551 ~~~~~g~~~~l~~ 563 (576)
T TIGR02204 551 RIVAQGTHAELIA 563 (576)
T ss_pred EEEeeecHHHHHH
Confidence 9999999998754
No 471
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.1e-33 Score=301.12 Aligned_cols=171 Identities=40% Similarity=0.725 Sum_probs=151.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCc--CCCCCceeEEEECCeeCCCCCcCceEEEecCCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999999 776 8999999998765334567999999999999999
Q ss_pred HHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCcccc
Q 000615 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1389)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~r 341 (1389)
++||+.+..+ +.
T Consensus 99 ~~~~i~~~~~-----------------------------------------------------~~--------------- 110 (194)
T cd03213 99 VRETLMFAAK-----------------------------------------------------LR--------------- 110 (194)
T ss_pred HHHHHHHHHH-----------------------------------------------------hc---------------
Confidence 9999976310 00
Q ss_pred CCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEcCCe
Q 000615 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1389)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~~G~ 421 (1389)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.|+|++.|++..++.+.+|++++|++|+
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~v~~l~~G~ 189 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADT-GRTIICSIHQPSSEIFELFDKLLLLSQGR 189 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCchHHHHHhcCEEEEEeCCE
Confidence 39999999999999999999999999999999999999999999998653 78888888887667888999999999999
Q ss_pred EEEec
Q 000615 422 IVYQG 426 (1389)
Q Consensus 422 iv~~G 426 (1389)
+++.|
T Consensus 190 i~~~~ 194 (194)
T cd03213 190 VIYFG 194 (194)
T ss_pred EEecC
Confidence 98765
No 472
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-33 Score=316.54 Aligned_cols=195 Identities=26% Similarity=0.351 Sum_probs=156.3
Q ss_pred eeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---hhhhhheeeEeccCCCCCCCCCH
Q 000615 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ....++.++|++|++.+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 59999999999999999999999999999999999765 34799999997643 2345667999999988876 699
Q ss_pred HHHHHHHHHhhcCCCCcHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 958 YESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELV--ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
+||+.+.... ....... ..+++.++.+ ++.+..+.. +..||||||||++||++|+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999875321 1111111 1234455554 444444433 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||||+|||+.++..+.+.|+++. +|.|||++||+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999986 45 45999999985 788888764
No 473
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.7e-33 Score=311.63 Aligned_cols=195 Identities=26% Similarity=0.415 Sum_probs=159.0
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhhhheeeEeccCCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
+.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 459999999999999999999999999999999999754 247999999986532 234567999999998776 69
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g------~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
|.|++.+... ... .+.+.++++.+++.+..+.... ...+..||||||||++||++|+.+|++|+|
T Consensus 94 v~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999976421 111 1235678888888776665421 112458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEec
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g 1090 (1389)
||||+|||+.++..+.+.|++++++ +|||++||+++ ..+.+|++++|.+ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998764 89999999976 3478999999985 7877653
No 474
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-33 Score=317.03 Aligned_cols=213 Identities=27% Similarity=0.367 Sum_probs=170.9
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC-----CCceeEEEECCeeCCCCCc---CceEEEecCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-----LRASGKITYCGHELNEFVP---QRTCAYISQHDL 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 255 (1389)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|+++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 46999999999999999999999999999999999998774 1137999999998764332 346899999987
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 335 (1389)
.++.+||+||+.++...... . .+... . +....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~-------------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--R-------------AGALT-H--------------RDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--c-------------cccCC-H--------------HHHHHHHHHHHHcCcHhhhcCCc
Confidence 66679999999875321000 0 00000 0 00123566888999987777777
Q ss_pred cCccccCCChhHhhHHHHHHHHh---------cCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcch
Q 000615 336 GDEMRRGISGGQKKRVTTGEMLV---------GTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPE 406 (1389)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~---------~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~ 406 (1389)
++ |||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .+
T Consensus 144 ~~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~-~~ 217 (272)
T PRK13547 144 TT-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDP-NL 217 (272)
T ss_pred cc-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HH
Confidence 66 9999999999999999 599999999999999999999999999998765467877777665 47
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 000615 407 TYDLFDDIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 407 ~~~~~D~iilL~~G~iv~~G~~~~~~ 432 (1389)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 78899999999999999999988763
No 475
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.5e-32 Score=305.57 Aligned_cols=196 Identities=26% Similarity=0.401 Sum_probs=165.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHH 257 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999887 9999999998764332 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccC
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 337 (1389)
+.+|+.||+.++...... ...+ +....++.+++.+||.+..++.+.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 141 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN---------LSYQ------------------------EARERARAMLEAVGLGDHLDYYPHN 141 (220)
T ss_pred CCCCHHHHHHHHHHhccC---------CCHH------------------------HHHHHHHHHHHHcCChhhhhcChhh
Confidence 889999999886432110 0000 0011356688999998888877765
Q ss_pred ccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEE
Q 000615 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1389)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL 417 (1389)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++.|++. ..+.+|+|++|
T Consensus 142 -----lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l 214 (220)
T TIGR02982 142 -----LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHM 214 (220)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEE
Confidence 99999999999999999999999999999999999999999999987655788888888763 56899999999
Q ss_pred cCCeE
Q 000615 418 SEGQI 422 (1389)
Q Consensus 418 ~~G~i 422 (1389)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 476
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.6e-33 Score=308.36 Aligned_cols=185 Identities=29% Similarity=0.378 Sum_probs=156.1
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
+.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+......++.++|++|++.+++.+||.|
T Consensus 15 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~~ 92 (207)
T PRK13539 15 RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVAE 92 (207)
T ss_pred eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHHH
Confidence 469999999999999999999999999999999999755 347999999986532225667899999998888999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
|+.+....+. .. .+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 160 (207)
T PRK13539 93 NLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPTAALDA 160 (207)
T ss_pred HHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 9987553321 11 134789999999987666553 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
.+...+.+.|++++++|+|||++||++. ++ .. |+++.+.
T Consensus 161 ~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~~ 199 (207)
T PRK13539 161 AAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDLG 199 (207)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEeec
Confidence 9999999999998878999999999975 33 44 8887774
No 477
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=358.07 Aligned_cols=213 Identities=23% Similarity=0.329 Sum_probs=177.5
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 36999999987641 124699999999999999999999999999999999997663 47999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1389)
.+ ...+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 64 3567888999999999886 59999997742 11122 2346777887776543 36666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|||++||+++ ..+.||++++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4799999999974 6788999999985
Q ss_pred CcEEEEecCC
Q 000615 1083 GGRVIYAGPL 1092 (1389)
Q Consensus 1083 gG~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 478
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-33 Score=313.54 Aligned_cols=212 Identities=17% Similarity=0.292 Sum_probs=165.1
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCCC-----cCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|..+ +....+|+|+++|+++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999975 21123899999998875321 24579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCccccccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 336 (1389)
++. ||+||+.++....+.... . .+ ....++.+++.+||.+...+.+.
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~--------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN--------K----------KK--------------LDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC--------H----------HH--------------HHHHHHHHHHHcCCCchhhhHhh
Confidence 875 999999875322111000 0 00 01124567888888653222111
Q ss_pred CccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEE
Q 000615 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1389)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iil 416 (1389)
...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+|++
T Consensus 145 -~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiiisH~~-~~~~~~~d~i~~ 220 (251)
T PRK14244 145 -DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--NFTIIVVTHSM-KQAKKVSDRVAF 220 (251)
T ss_pred -cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHhhcCEEEE
Confidence 12345999999999999999999999999999999999999999999999853 67777777665 477889999999
Q ss_pred EcCCeEEEecChhHHH
Q 000615 417 LSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1389)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 479
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.1e-32 Score=312.51 Aligned_cols=207 Identities=26% Similarity=0.302 Sum_probs=161.7
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh---hhh-hheeeEeccCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETF-ARVSGYCEQNDIHSPYV 955 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~-~~~~gyv~Q~~~~~~~l 955 (1389)
+.+|+|+|++|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+... ... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (248)
T PRK09580 14 KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPGV 93 (248)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccch
Confidence 46999999999999999999999999999999999973111357999999987532 122 34699999999888888
Q ss_pred CHHHHHHHHHH-hhc--C-CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 956 TVYESLLYSAW-LRL--S-SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 956 Tv~E~l~f~~~-lr~--~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
|+.+++.+... ++. . .........+.++++++.+++. +..+..+ ...|||||||||+|||+|+.+|+||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~illL 169 (248)
T PRK09580 94 SNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPELCIL 169 (248)
T ss_pred hHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 87776643211 110 0 0111223345678899999984 3444432 126999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hCeEEEEecCcEEEEecCC
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~l~l~~gG~~~~~g~~ 1092 (1389)
||||+|||+.++..+.+.|+++++.|+|||++||+++ .+... +|++++|. +|++++.|+.
T Consensus 170 DEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 170 DESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEE-CCeEEEeCCH
Confidence 9999999999999999999999877899999999976 34444 79999997 5899998874
No 480
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.9e-33 Score=316.63 Aligned_cols=196 Identities=29% Similarity=0.404 Sum_probs=153.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---hhhhhheeeEeccCCCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
+.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.. ....++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 459999999999999999999999999999999999765 34799999997653 2234567999999988776 69
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS-------MVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1389)
|+|++.+....+ ..+ .+++.++..++.+..+. ... ..+..|||||||||+||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999997743211 111 12233333333222111 111 1246899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC
Q 000615 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~ 1092 (1389)
|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999976 34 58999999985 789988874
No 481
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.9e-33 Score=355.09 Aligned_cols=212 Identities=26% Similarity=0.417 Sum_probs=177.9
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1389)
..++|+|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46899999987631 123599999999999999999999999999999999997653 47999999987
Q ss_pred CC---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000615 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN------DSMVGLPG 1003 (1389)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~~g~~~ 1003 (1389)
.. ...+++.++||+|++.+++ -|++||+.++. + +. .++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 54 3567788999999998876 59999998753 1 22 234478899999987653 4455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
...||||||||++|||+|+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999986 5899999999986 4567999999985
Q ss_pred cEEEEecCC
Q 000615 1084 GRVIYAGPL 1092 (1389)
Q Consensus 1084 G~~~~~g~~ 1092 (1389)
|++++.|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999874
No 482
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-33 Score=298.06 Aligned_cols=156 Identities=29% Similarity=0.443 Sum_probs=140.9
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCCH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1389)
..+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 3599999999999999999999999999999999997653 47999999987542 2345679999999998888999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000615 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1389)
Q Consensus 958 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1389)
.||+. ||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
|+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|.+
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~ 170 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNN 170 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeC
Confidence 999999999999999877899999999976 56678999999985
No 483
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-33 Score=314.38 Aligned_cols=211 Identities=25% Similarity=0.393 Sum_probs=163.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 356777776442 123599999999999999999999999999999999997653 479999999765
Q ss_pred C---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000615 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMV-G-----LPGV 1004 (1389)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~ 1004 (1389)
. ...+++.++|++|++.+++. |++||+.+... .... ..+++.++.+++.+..+... | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 3 23456679999999887775 99999976521 1111 12344455555543332211 0 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 000615 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1389)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG 1084 (1389)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.+|++++|.+ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999976 34 56999999985 8
Q ss_pred EEEEecCC
Q 000615 1085 RVIYAGPL 1092 (1389)
Q Consensus 1085 ~~~~~g~~ 1092 (1389)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887763
No 484
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.8e-33 Score=317.02 Aligned_cols=207 Identities=25% Similarity=0.328 Sum_probs=169.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc------CceEEEecCCC--C
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHD--L 255 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 255 (1389)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|.++|+++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 56999999999999999999999999999999999999886 9999999998765432 45799999997 3
Q ss_pred CCCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc-cccccc
Q 000615 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1389)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 334 (1389)
+.+..|+.|++.+...... ..... +....++.+++.+||+ +..++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~---------~~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL---------SLDKA------------------------ERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc---------cCCHH------------------------HHHHHHHHHHHHcCCChhHhhCC
Confidence 5677899999976421000 00000 0112356788899996 466776
Q ss_pred ccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeE
Q 000615 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1389)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1389)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 149 ~~~-----LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~-~~i~~~~d~i 222 (268)
T PRK10419 149 PPQ-----LSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDL-RLVERFCQRV 222 (268)
T ss_pred Ccc-----CChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCH-HHHHHhCCEE
Confidence 665 9999999999999999999999999999999999999999999998765567777776654 4777899999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000615 415 ILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 415 ilL~~G~iv~~G~~~~~~ 432 (1389)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999988864
No 485
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=311.64 Aligned_cols=206 Identities=20% Similarity=0.336 Sum_probs=163.4
Q ss_pred eEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCC--CCCceeEEEECCeeCCCC-----CcCceEEEecCCCCCC
Q 000615 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK--DLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1389)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1389)
++|+|+|++|++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998753 212489999999987531 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----ccccc
Q 000615 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1389)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~dt 333 (1389)
+ +||+||+.++....+.... .+ ....++..++.+++. +..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-------------------KK--------------LDEIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-------------------HH--------------HHHHHHHHHHHcCCchhhHHHHhc
Confidence 7 8999999886432211000 00 011234456666664 23455
Q ss_pred cccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCe
Q 000615 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1389)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1389)
.+++ |||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|+. .++.+++|+
T Consensus 143 ~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d~ 214 (250)
T PRK14240 143 SALG-----LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DYTIVIVTHNM-QQASRISDK 214 (250)
T ss_pred CCCC-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEEeCH-HHHHhhCCE
Confidence 5544 999999999999999999999999999999999999999999999853 56777776654 578889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000615 414 IILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 414 iilL~~G~iv~~G~~~~~~ 432 (1389)
|++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 486
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.1e-32 Score=312.00 Aligned_cols=201 Identities=27% Similarity=0.412 Sum_probs=167.4
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCCCH
Q 000615 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTV 262 (1389)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 262 (1389)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999874 3 7999999998765432 2468999999888888999
Q ss_pred HHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcccccccccCccccC
Q 000615 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1389)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~rG 342 (1389)
+||+.+.... ... . .+ ....++.+++.+||++..++.+++
T Consensus 87 ~~nl~~~~~~-~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (248)
T PRK03695 87 FQYLTLHQPD-KTR----------T----------EA--------------VASALNEVAEALGLDDKLGRSVNQ----- 126 (248)
T ss_pred HHHHHhcCcc-CCC----------c----------HH--------------HHHHHHHHHHHcCCHhHhcCCccc-----
Confidence 9999875221 000 0 00 012356688899998878887766
Q ss_pred CChhHhhHHHHHHHHhc-------CCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEE
Q 000615 343 ISGGQKKRVTTGEMLVG-------TANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1389)
Q Consensus 343 LSGGqkqRvsia~al~~-------~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ii 415 (1389)
|||||||||+||+||+. +|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+. .++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~tvi~~sH~~-~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-QGIAVVMSSHDL-NHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCH-HHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999999875 367777776654 47889999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000615 416 LLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999988763
No 487
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=329.65 Aligned_cols=193 Identities=21% Similarity=0.301 Sum_probs=161.8
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCChhhhhheeeEeccCCCCCCCCCHHH
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1389)
+.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P--~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMP--NKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 4699999999999999999999999999999999997653 479999999641 1223345567789999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000615 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1389)
Q Consensus 960 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1389)
++.+..... ....++..+.++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||+
T Consensus 105 nL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 998754332 1223444456788999999988777763 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|.+ |++++.|+..+
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~e 229 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIKE 229 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHHH
Confidence 9999999999998877999999999986 57788999999984 89999987643
No 488
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=311.60 Aligned_cols=207 Identities=22% Similarity=0.360 Sum_probs=164.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 12389999999987532 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCcc----ccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 332 (1389)
++ +||+||+.++....+... ... ....++..++.+|+.+ ..+
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKS-------------------KHK--------------LDRIVEESLKKAALWDEVKSELN 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc-------------------HHH--------------HHHHHHHHHHHcCCCchhHHHHh
Confidence 87 899999988643211100 000 0112345667777753 244
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
..++ .||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|++++.|++ .++.+++|
T Consensus 142 ~~~~-----~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tili~sH~~-~~~~~~~d 213 (250)
T PRK14262 142 KPGT-----RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--NYTIVIVTHNI-GQAIRIAD 213 (250)
T ss_pred CChh-----hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--CcEEEEEeCCH-HHHHHhCC
Confidence 4444 4999999999999999999999999999999999999999999999864 56777776654 46888999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|+++..|+.+++.
T Consensus 214 ~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 214 YIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEEECCEEEEecCHHHHH
Confidence 99999999999999998874
No 489
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-33 Score=328.05 Aligned_cols=212 Identities=25% Similarity=0.381 Sum_probs=178.6
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1389)
.++++|++++++.+ ..++|+|+|+++++||.+||+|+||||||||+..|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999887532 3469999999999999999999999999999999999665 3489999999875
Q ss_pred C---hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000615 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS-------MVGLPG 1003 (1389)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~~g~~~ 1003 (1389)
. ...+++.++.++|...++. -|+++||.++. .+.+ ++.++++++.+||+++... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 3 3446778999999877654 59999998752 2333 3448899999999886544 3554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 000615 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1389)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~g 1083 (1389)
...||||||||++|||+|++|.++++|||||.|||+.++++|++.|.+.++ |+|+|++||+.. -.+.||+|++|+ +
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~-~ 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLD-N 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEE-C
Confidence 467999999999999999999999999999999999999999999998774 999999999975 568899999998 5
Q ss_pred cEEEEecCCC
Q 000615 1084 GRVIYAGPLG 1093 (1389)
Q Consensus 1084 G~~~~~g~~~ 1093 (1389)
|++++.|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 8999999754
No 490
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=313.44 Aligned_cols=216 Identities=22% Similarity=0.280 Sum_probs=173.2
Q ss_pred ceEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000615 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 929 (1389)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~ 929 (1389)
..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3578888876542 24699999999999999999999999999999999997542 2 258999999
Q ss_pred CccCC-------hhhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccc
Q 000615 930 GYPKN-------QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSM 998 (1389)
Q Consensus 930 g~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 998 (1389)
|.+.. ...+++.++|++|++.+++. ||+||+.+...... .. .....++.++++++.+++.+ ..+..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~~-~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-VK-RRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-CC-hHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87542 12346679999999988886 99999987643221 11 11222455788888888742 22332
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEE
Q 000615 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1389)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l 1078 (1389)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999875 699999999976 5778899999
Q ss_pred EEecCcEEEEecCC
Q 000615 1079 LLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1389)
+|. +|+++..|+.
T Consensus 232 ~l~-~G~i~~~g~~ 244 (265)
T PRK14252 232 YMY-MGELIEFGAT 244 (265)
T ss_pred EEE-CCEEEEeCCH
Confidence 997 5899988874
No 491
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.3e-33 Score=311.28 Aligned_cols=206 Identities=24% Similarity=0.399 Sum_probs=161.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCc---CceEEEecCCCCCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-R 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-c
Confidence 45899999999999999999999999999999999999887 8999999988754322 457999999987764 7
Q ss_pred CHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHh--CCcccccccccCc
Q 000615 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL--GLDICADTMVGDE 338 (1389)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~l--gL~~~~dt~vg~~ 338 (1389)
||+||+.+... ... .+... +... ....+..++.+ |++...+..+++
T Consensus 91 tv~~nl~~~~~--~~~--~~~~~---------------------~~~~------~~~~~~~l~~l~~~~~~~~~~~~~~- 138 (237)
T cd03252 91 SIRDNIALADP--GMS--MERVI---------------------EAAK------LAGAHDFISELPEGYDTIVGEQGAG- 138 (237)
T ss_pred hHHHHhhccCC--CCC--HHHHH---------------------HHHH------HcCcHHHHHhCcccccchhhcCCCc-
Confidence 99999987432 100 00000 0000 00112344444 455444555544
Q ss_pred cccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcCeEEEEc
Q 000615 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1389)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~iilL~ 418 (1389)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++ ..+|++++|+
T Consensus 139 ----LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~-~~~d~v~~l~ 210 (237)
T cd03252 139 ----LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--GRTVIIIAHRLS-TV-KNADRIIVME 210 (237)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEeCCHH-HH-HhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999863 678888877764 45 5699999999
Q ss_pred CCeEEEecChhHHHH
Q 000615 419 EGQIVYQGPRDNVLE 433 (1389)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1389)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999988753
No 492
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=311.45 Aligned_cols=208 Identities=23% Similarity=0.319 Sum_probs=164.6
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987531 1379999999987532 124579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCC----ccccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL----DICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL----~~~~d 332 (1389)
++.+|+.||+.++....+... ..+. ...++..++.+++ .+..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-------------------~~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-------------------RDHL--------------MEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-------------------HHHH--------------HHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987543211000 0000 0112334444544 23446
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d 215 (252)
T PRK14272 144 TPATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--VTTIIIVTHNM-HQAARVSD 215 (252)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999864 56777766654 47888999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 493
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-34 Score=289.85 Aligned_cols=209 Identities=25% Similarity=0.393 Sum_probs=180.2
Q ss_pred ccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---hhhhhheeeEeccCCCCC
Q 000615 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHS 952 (1389)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~ 952 (1389)
.++.+.+|++||..|++|.+++|+|||||||||||.++++... ..+|+|.++|.+.. ...+++.++.+-|+....
T Consensus 10 ~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~ 87 (252)
T COG4604 10 SYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHIN 87 (252)
T ss_pred hhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhh
Confidence 4567789999999999999999999999999999999998654 34799999998753 356778888899998888
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000615 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1389)
Q Consensus 953 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1389)
..+||+|-+.|+..-..... ..++.+..++++++.++|+++.|+.. ..||||||||.-||..++.+.+.++|||
T Consensus 88 ~rlTV~dLv~FGRfPYSqGR-lt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDE 161 (252)
T COG4604 88 SRLTVRDLVGFGRFPYSQGR-LTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDE 161 (252)
T ss_pred heeEHHHHhhcCCCcccCCC-CchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecC
Confidence 89999999999753322222 23455677999999999999999984 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCCCc
Q 000615 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1389)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~~~ 1094 (1389)
|.++||-..+..+|+.||+++++ |+|||++.||.+. .....|+++.|++ |+++..|++.+
T Consensus 162 PLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 162 PLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred cccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 99999999999999999999876 9999999999774 4446799999985 89999999754
No 494
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=320.71 Aligned_cols=207 Identities=18% Similarity=0.316 Sum_probs=162.4
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
.++|+|+|++|++|++++|+||||||||||+++|+|..+ |....+|+|.++|.++... ..++.++|++|++.+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 131 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNP 131 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCCC
Confidence 359999999999999999999999999999999999854 2001389999999987532 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++. ||+||+.++....+... ... ....++..++.+|+. +..+
T Consensus 132 ~~~-tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~l~~~~~ 177 (286)
T PRK14275 132 FPK-SIFDNIAYGPRLHGIND-------------------KKQ--------------LEEIVEKSLRKAALWDEVSDRLD 177 (286)
T ss_pred Ccc-CHHHHHHhHHHhcCCCc-------------------HHH--------------HHHHHHHHHHHhCCccchhhHhh
Confidence 874 99999988643211100 000 011234456667763 3345
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 178 ~~~~~-----LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~tvIivsH~~-~~~~~~~d 249 (286)
T PRK14275 178 KNALG-----LSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--SYTIMIVTHNM-QQASRVSD 249 (286)
T ss_pred CChhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCC
Confidence 55544 999999999999999999999999999999999999999999999864 46777666554 57788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
++++|++|+++..|+.+++.
T Consensus 250 ~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 250 YTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988874
No 495
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.7e-33 Score=327.51 Aligned_cols=218 Identities=27% Similarity=0.393 Sum_probs=185.8
Q ss_pred ccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh----hhhhheeeEeccCCCC
Q 000615 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIH 951 (1389)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~ 951 (1389)
.++..++|+||||++++||++||+|.||||||||+|+|+|-.. +.+|+|.++|.+... +.....|+.|.|+..+
T Consensus 17 ~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L 94 (500)
T COG1129 17 SFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVHQELSL 94 (500)
T ss_pred EcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEeechhc
Confidence 3456789999999999999999999999999999999999765 358999999987532 3345679999999999
Q ss_pred CCCCCHHHHHHHHHHhhc-CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000615 952 SPYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1389)
Q Consensus 952 ~~~lTv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1389)
.|++||.||+.++...+. ..-++.+...+...++|+.+++....++.+ .+||+||||.|.|||||..+++||+|
T Consensus 95 ~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~~~arllIl 169 (500)
T COG1129 95 VPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALSFDARVLIL 169 (500)
T ss_pred cCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999988765543 233556677778899999999864466665 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEecCC-Cc-chhHHHHH
Q 000615 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL-GH-ESHKLIEY 1102 (1389)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~~gG~~~~~g~~-~~-~~~~~~~~ 1102 (1389)
|||||.|+......+.+.++++.++|.+||++||.++ |+++.||++.+|. +|+++...+. .+ ..+++++.
T Consensus 170 DEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlR-DG~~v~~~~~~~~~~~~~lv~~ 241 (500)
T COG1129 170 DEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLR-DGRVVGTRPTAAETSEDELVRL 241 (500)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEe-CCEEeeecccccCCCHHHHHHH
Confidence 9999999999999999999999999999999999997 8999999999997 5899988883 43 33445444
No 496
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=320.38 Aligned_cols=221 Identities=24% Similarity=0.329 Sum_probs=172.9
Q ss_pred eEEEeccceeeeccccccccccccccceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000615 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1389)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1389)
.+.++|+++.++ .+.+|+++|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 578888876542 24699999999999999999999999999999999997531 13579999999
Q ss_pred ccCCh-----hhhhheeeEeccCCCCCCCCCHHHHHHHHHHhhcCC---------CCc-HHHHHHHHHHHHHHcCCcccc
Q 000615 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS---------DVD-TKKRKMFVDEVMELVELKSLN 995 (1389)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 995 (1389)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999988877 59999999864322100 011 122345688899999884322
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhC
Q 000615 996 DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1075 (1389)
Q Consensus 996 ~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 1075 (1389)
+.... ..+..||||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12468999999999999999999999999999999999999999999999976 589999999986 5677899
Q ss_pred eEE-EEecCcEEEEecCC
Q 000615 1076 ELL-LLKRGGRVIYAGPL 1092 (1389)
Q Consensus 1076 ~~l-~l~~gG~~~~~g~~ 1092 (1389)
+++ +|. +|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 555 5899999875
No 497
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=4.8e-33 Score=304.32 Aligned_cols=184 Identities=24% Similarity=0.305 Sum_probs=154.2
Q ss_pred cceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh--hhhhheeeEeccCCCCCCCCC
Q 000615 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1389)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1389)
++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 3569999999999999999999999999999999999765 347999999986432 234567999999988888899
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000615 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1389)
Q Consensus 957 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1389)
+.||+.+....+. . + .+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 157 (198)
T TIGR01189 90 ALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTA 157 (198)
T ss_pred HHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987643321 1 1 235788999999988776654 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEE
Q 000615 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1079 (1389)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~ 1079 (1389)
||+.++..+++.|++++++|.|||+++|++. + ..+++++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~--~~~~~~~~ 197 (198)
T TIGR01189 158 LDKAGVALLAGLLRAHLARGGIVLLTTHQDL-G--LVEARELR 197 (198)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-c--ccceEEee
Confidence 9999999999999998778999999999874 2 23466553
No 498
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-33 Score=298.38 Aligned_cols=158 Identities=30% Similarity=0.418 Sum_probs=141.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hhhhheeeEeccCCCCCCC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1389)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 469999999999999999999999999999999999765 347999999987532 3456789999999988888
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000615 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1389)
Q Consensus 955 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1389)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999987542 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhCeEEEEec
Q 000615 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1389)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~l~l~~ 1082 (1389)
+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~ 176 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRD 176 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC
Confidence 999999999999999999877 899999999976 56668999999985
No 499
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.3e-32 Score=306.93 Aligned_cols=191 Identities=24% Similarity=0.300 Sum_probs=156.5
Q ss_pred ceeeecceeEEeCCeEEEEeccCCCchHHHHhhhcCCCCCceEEEEEEEc--Cc--cCC---hhh---h-hheeeEeccC
Q 000615 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--GY--PKN---QET---F-ARVSGYCEQN 948 (1389)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~--g~--~~~---~~~---~-~~~~gyv~Q~ 948 (1389)
+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++ |. +.. ... . ++.++|++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 4699999999999999999999999999999999997553 46999998 42 321 111 2 3468999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 000615 949 DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSI 1027 (1389)
Q Consensus 949 ~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~i 1027 (1389)
+.+++.+||.|++.+..... ........+.+.++++.+++.+ ..+.. +..||||||||++||++|+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP-----PATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999998764322 1222334456788999999975 33443 457999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 000615 1028 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1389)
Q Consensus 1028 llLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~l~l~ 1081 (1389)
|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999877999999999964 3556899988763
No 500
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=308.82 Aligned_cols=207 Identities=19% Similarity=0.281 Sum_probs=161.7
Q ss_pred ceEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CcCceEEEecCCCCC
Q 000615 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1389)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 256 (1389)
+++|+|+|+++++|++++|+||||||||||+++|+|..+ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 359999999999999999999999999999999999865 3212389999999987431 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCcchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHhCCc----cccc
Q 000615 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1389)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 332 (1389)
++ .||+||+.+.....+.... ... ...+...++.+++. +..+
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-------------------~~~--------------~~~~~~~l~~~~l~~~i~~~~~ 143 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-------------------AVL--------------DEAVETSLKQAAIWDEVKDHLH 143 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-------------------HHH--------------HHHHHHHHHHcCCccchhhHHh
Confidence 87 7999999876432211000 000 00123345555553 3345
Q ss_pred ccccCccccCCChhHhhHHHHHHHHhcCCcEeEEecCCCCCChHHHHHHHHHHHHHHHhCCCeEEEEEecCcchHHhhcC
Q 000615 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1389)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1389)
..+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+.+|
T Consensus 144 ~~~~~-----LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vsH~~-~~~~~~~d 215 (252)
T PRK14255 144 ESALS-----LSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--QYTIILVTHSM-HQASRISD 215 (252)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--CCEEEEEECCH-HHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999865 46777766654 57888999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000615 413 DIILLSEGQIVYQGPRDNVL 432 (1389)
Q Consensus 413 ~iilL~~G~iv~~G~~~~~~ 432 (1389)
+|++|++|+++..|+..++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 216 KTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
Done!