BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000617
(1388 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 604 bits (1557), Expect = e-172, Method: Compositional matrix adjust.
Identities = 359/864 (41%), Positives = 499/864 (57%), Gaps = 81/864 (9%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
M + ++ SI+VSGESGAGKT + K MRY A + G S E VE++VL SNP++E+ G
Sbjct: 150 MARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SASEA-NVEEKVLASNPIMESIG 207
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKT RN+NSSRFGK++EI FDK RI GA +RTYLLE+SRV ++ ERNYH FY LCA
Sbjct: 208 NAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCA 267
Query: 121 -APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFR 179
A + +LG+ FHY Q +DG+ DA E + TR+A ++GISD Q IFR
Sbjct: 268 SAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFR 327
Query: 180 VVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE 239
++A ILHLGN++FA ++ DS I + L + +L+ D + + L R + T
Sbjct: 328 ILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCDLMGVDYEEMAHWLCHRKLATAT 384
Query: 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESF 299
E + + ++A+ +RDALAK IY+ LF+WIV+ +N ++ S IGVLDIYGFE+F
Sbjct: 385 ETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETF 444
Query: 300 KCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPG 359
+ NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY +E+I W+ I+F DNQ ++LIE K
Sbjct: 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-M 503
Query: 360 GIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKPKLSRTDFTILHYAGEVTYQANH 418
G++ LLDE C PK + +T++QKL T K F KP+LS F I H+A +V YQ
Sbjct: 504 GVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEG 563
Query: 419 FLDKNKDYVVAEHQALLTAAK----------------------------CSFVAGXXXXX 450
FL+KNKD V E +L ++K S
Sbjct: 564 FLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKA 623
Query: 451 XXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLR 510
+G +F+ L LMETLNAT PHY+RC+KPN+ P F+ +QQLR
Sbjct: 624 RPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLR 683
Query: 511 CGGVLEAIRISCAGYPTRRTFYEFVNRFGILA--PEVLEGNYDDQVACQMILDKKGL--K 566
GVLE IRIS AG+P+R T+ EF +R+ +L +VL D + C+ +L+K L
Sbjct: 684 ACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS---DRKQTCKNVLEKLILDKD 740
Query: 567 GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSF 626
YQ GKTK+F RAGQ+A L+ RA+ L A +IQ+ R ++ RK+++ +R AA+ +Q +
Sbjct: 741 KYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRY 800
Query: 627 LRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRL 686
+RG AR LRR AA+ IQ R YV ++ Y +R + + LQ LR + RN++++
Sbjct: 801 VRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQM 860
Query: 687 RKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAAR------ 740
R +II Q R A +Y + +AI+ QC +R +A+REL+KLK+ AR
Sbjct: 861 MLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYK 920
Query: 741 ------ETGALQ----------EAKNKLEKRVE-ELTWRLQIEK------RLRTDLEEAK 777
E +Q E K+ LEK E+T+ + EK RLR EEAK
Sbjct: 921 KLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAK 980
Query: 778 S---------QEIAKLQEALHAMQ 792
+ +EIAKL++ LH Q
Sbjct: 981 NATNRVLSLQEEIAKLRKELHQTQ 1004
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/598 (46%), Positives = 397/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDIYGFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDIYGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/598 (46%), Positives = 397/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDIYGFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDIYGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + ++ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/608 (45%), Positives = 398/608 (65%), Gaps = 14/608 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSS FGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + + + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 760
Query: 592 VLGNAARK 599
LG+ K
Sbjct: 761 RLGSEQTK 768
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 529 bits (1362), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/602 (46%), Positives = 398/602 (66%), Gaps = 14/602 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 165 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 224
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 225 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 284
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 285 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 344
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 345 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 401 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 459
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 460 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 519
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 520 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 579
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 580 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 639
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 640 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 699
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 700 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 759
Query: 592 VL 593
L
Sbjct: 760 RL 761
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 529 bits (1362), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/602 (46%), Positives = 398/602 (66%), Gaps = 14/602 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 177 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 236
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 237 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 296
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 297 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 356
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 357 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 413 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 471
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 472 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 531
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 532 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 591
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 592 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 651
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 652 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 711
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 712 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 771
Query: 592 VL 593
L
Sbjct: 772 RL 773
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/600 (46%), Positives = 397/600 (66%), Gaps = 14/600 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 177 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 236
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 237 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 296
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 297 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 356
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 357 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 413 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 471
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 472 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 531
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 532 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 591
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 592 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 651
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 652 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 711
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 712 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 771
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/602 (46%), Positives = 398/602 (66%), Gaps = 14/602 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 177 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 236
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 237 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 296
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 297 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 356
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 357 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 413 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 471
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 472 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 531
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 532 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 591
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 592 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 651
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 652 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 711
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 712 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 771
Query: 592 VL 593
L
Sbjct: 772 RL 773
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/600 (46%), Positives = 397/600 (66%), Gaps = 14/600 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 177 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 236
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 237 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 296
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 297 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 356
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 357 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 413 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 471
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 472 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 531
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 532 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 591
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 592 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 651
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 652 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 711
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 712 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 771
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 528 bits (1360), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/598 (46%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDIEGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/598 (46%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 528 bits (1359), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/598 (46%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/598 (46%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 527 bits (1357), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/598 (46%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNN+SRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/598 (46%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + ++ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/602 (46%), Positives = 397/602 (65%), Gaps = 14/602 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 165 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 224
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 225 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 284
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 285 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 344
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 345 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V KIN + Q+ + IGVLDI GFE
Sbjct: 401 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQERKA-YFIGVLDISGFEI 459
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 460 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 519
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 520 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 579
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 580 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 639
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 640 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 699
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARRAE 591
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R +
Sbjct: 700 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQ 759
Query: 592 VL 593
L
Sbjct: 760 RL 761
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 526 bits (1354), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/598 (46%), Positives = 395/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 165 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 224
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 225 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 284
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 285 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 344
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 345 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 401 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 459
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 460 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 519
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 520 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 579
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 580 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 639
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC VLE IRI+ G+P R + +
Sbjct: 640 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGIRITRKGFPNRIIYAD 699
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 700 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 525 bits (1353), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/598 (45%), Positives = 396/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + ++ + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCEERKA-YFIGVLDIEGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + ++ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/598 (46%), Positives = 395/598 (66%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 165 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 224
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 225 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 284
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 285 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 344
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 345 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDI GFE
Sbjct: 401 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDISGFEI 459
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 460 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 519
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 520 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 579
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 580 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 639
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC VLE IRI+ G+P R + +
Sbjct: 640 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGIRITRKGFPNRIIYAD 699
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 700 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/598 (46%), Positives = 394/598 (65%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + + + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSE-RAAYFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ +LAP V D Q A +L + + Y+ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 521 bits (1342), Expect = e-148, Method: Compositional matrix adjust.
Identities = 275/598 (45%), Positives = 393/598 (65%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + + + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAG--XXXXXXXXXXXXXXXXXIGSRFKLQLQS 473
+L+KNKD + + + + + V + +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFLTVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLEAIRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ LAP V D Q A +L + + ++ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 275/598 (45%), Positives = 392/598 (65%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + + + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ LAP V D Q A +L + + ++ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/598 (45%), Positives = 392/598 (65%), Gaps = 14/598 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 166 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 225
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S ERNYH FY LL
Sbjct: 226 GNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERNYHIFYQLL 285
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD E+ TR+AMDIVG S +EQ +IF
Sbjct: 286 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIF 345
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 346 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + + + IGVLDI GFE
Sbjct: 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA-YFIGVLDISGFEI 460
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQE+Y +E+INW++I+F +D+Q +DLI+ +
Sbjct: 461 FKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDFGLDSQATIDLIDGR 520
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 521 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 580
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAG--XXXXXXXXXXXXXXXXXIGSRFKLQLQS 473
+L+KNKD + + + + + V + +++K QL S
Sbjct: 581 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFLTVAAQYKEQLAS 640
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R + +
Sbjct: 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD 700
Query: 534 FVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDARR 589
FV R+ LAP V D Q A +L + + ++ G TK+F RAGQ+A ++ R
Sbjct: 701 FVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/651 (44%), Positives = 393/651 (60%), Gaps = 43/651 (6%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
M + ++ SI+VSGESGAGKT + K MRY A + G S E VE++VL SNP++E+ G
Sbjct: 150 MARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SASEA-NVEEKVLASNPIMESIG 207
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKT RN+NSSRFGK++EI FDK RI GA +RTYLLE+SRV ++ ERNYH FY LCA
Sbjct: 208 NAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCA 267
Query: 121 -APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFR 179
A + +LG+ FHY Q +DG+ DA E + TR+A ++GISD Q IFR
Sbjct: 268 SAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFR 327
Query: 180 VVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE 239
++A ILHLGN++FA ++ DS I + L + +L+ D + + L R + T
Sbjct: 328 ILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCDLMGVDYEEMAHWLCHRKLATAT 384
Query: 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESF 299
E + + ++A+ +RDALAK IY+ LF+WIV+ +N ++ S IGVLDIYGFE+F
Sbjct: 385 ETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETF 444
Query: 300 KCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPG 359
+ NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY +E+I W+ I+F DNQ ++LIE K
Sbjct: 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-M 503
Query: 360 GIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKPKLSRTDFTILHYAGEVTYQANH 418
G++ LLDE C PK + +T++QKL T K F KP+LS F I H+A +V YQ
Sbjct: 504 GVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEG 563
Query: 419 FLDKNKDYVVAEHQALLTAAK----------------------------CSFVAGXXXXX 450
FL+KNKD V E +L ++K S
Sbjct: 564 FLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKA 623
Query: 451 XXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLR 510
+G +F+ L LMETLNAT PHY+RC+KPN+ P F+ +QQLR
Sbjct: 624 RPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLR 683
Query: 511 CGGVLEAIRISCAGYPTRRTFYEFVNRFGILA--PEVLEGNYDDQVACQMILDKKGL--K 566
GVLE IRIS AG+P+R T+ EF +R+ +L +VL D + C+ +L+K L
Sbjct: 684 ACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS---DRKQTCKNVLEKLILDKD 740
Query: 567 GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLR 617
YQ GKTK+F RAGQ+A L+ RA+ L A +IQ+ R ++ RK+++ +R
Sbjct: 741 KYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMR 791
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/625 (44%), Positives = 377/625 (60%), Gaps = 43/625 (6%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFG 60
M + ++ SI+VSGESGAGKT + K MRY A + G S E VE++VL SNP++E+ G
Sbjct: 150 MARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SASEA-NVEEKVLASNPIMESIG 207
Query: 61 NAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA 120
NAKT RN+NSSRFGK++EI FDK RI GA +RTYLLE+SRV ++ ERNYH FY LCA
Sbjct: 208 NAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCA 267
Query: 121 -APHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFR 179
A + +LG+ FHY Q +DG+ DA E + TR+A ++GISD Q IFR
Sbjct: 268 SAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFR 327
Query: 180 VVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE 239
++A ILHLGN++FA ++ DS I + L + +L+ D + + L R + T
Sbjct: 328 ILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIFCDLMGVDYEEMAHWLCHRKLATAT 384
Query: 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESF 299
E + + ++A+ +RDALAK IY+ LF+WIV+ +N ++ S IGVLDIYGFE+F
Sbjct: 385 ETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETF 444
Query: 300 KCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPG 359
+ NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY +E+I W+ I+F DNQ ++LIE K
Sbjct: 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-M 503
Query: 360 GIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKPKLSRTDFTILHYAGEVTYQANH 418
G++ LLDE C PK + +T++QKL T K F KP+LS F I H+A +V YQ
Sbjct: 504 GVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEG 563
Query: 419 FLDKNKDYVVAEHQALLTAAK----------------------------CSFVAGXXXXX 450
FL+KNKD V E +L ++K S
Sbjct: 564 FLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKA 623
Query: 451 XXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLR 510
+G +F+ L LMETLNAT PHY+RC+KPN+ P F+ +QQLR
Sbjct: 624 RPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLR 683
Query: 511 CGGVLEAIRISCAGYPTRRTFYEFVNRFGILA--PEVLEGNYDDQVACQMILDKKGL--K 566
GVLE IRIS AG+P+R T+ EF +R+ +L +VL D + C+ +L+K L
Sbjct: 684 ACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS---DRKQTCKNVLEKLILDKD 740
Query: 567 GYQIGKTKVFLRAGQMAELDARRAE 591
YQ GKTK+F RAGQ+A L+ RA+
Sbjct: 741 KYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/533 (47%), Positives = 362/533 (67%), Gaps = 12/533 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 165 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 224
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 225 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 284
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 285 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 344
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 345 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V+KIN + Q+ + IGVLDIYGFE
Sbjct: 401 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA-YFIGVLDIYGFEI 459
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 460 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 519
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 520 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 579
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 580 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 639
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYP 526
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P
Sbjct: 640 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/535 (47%), Positives = 361/535 (67%), Gaps = 12/535 (2%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV-EQQVLESNPVLEAF 59
M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+ G V EQQ+L++NP+LEAF
Sbjct: 165 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 224
Query: 60 GNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LL 118
GNAKT RNNNSSRFGKF+EIQF+ G ISGA+I++YLLE+SRV S+ ERNYH FY LL
Sbjct: 225 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 284
Query: 119 CAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIF 178
A E+ L P+SF+YLNQS C ++ GVSD+ E+ TR+AMDIVG S +EQ +IF
Sbjct: 285 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 344
Query: 179 RVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTP 238
+++A ILHLGNI F KG + +V+KD+ + LN + + + LE AL++ ++
Sbjct: 345 KIIAGILHLGNIKFEKGAG-EGAVLKDKTA---LNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 239 EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFES 298
+++ + L+ + +SRDAL K +Y RLF W+V KIN + Q+ + IGVLDI GFE
Sbjct: 401 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQERKA-YFIGVLDISGFEI 459
Query: 299 FKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQDVLDLIE-K 356
FK NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY +E+INW++I+F +D+Q +DLI+ +
Sbjct: 460 FKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGR 519
Query: 357 KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNN-RFSKPKLSRTDFTILHYAGEVTYQ 415
+P GI+ALLDE +FP +T T KL F+K N ++ +P+ S+T+F + HYAG+V Y+
Sbjct: 520 QPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYE 579
Query: 416 ANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXI--GSRFKLQLQS 473
+L+KNKD + + + + + V I +++K QL S
Sbjct: 580 IQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 639
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTR 528
LM TL T PH++RC+ PNN P+ E+ V+ QLRC GVLE IRI+ G+P R
Sbjct: 640 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNR 694
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 371/659 (56%), Gaps = 39/659 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------GRSGVEGRTVEQQVLE 51
M+ + ++ S L++GESGAGKTE TK ++ YLA + EG ++E Q+++
Sbjct: 159 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEG-SLEDQIIQ 217
Query: 52 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 111
+NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERN
Sbjct: 218 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 277
Query: 112 YHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDIVGI 169
YH FY +C+ ++ L +P S + ++NQ C +D + D E+ A DI+G
Sbjct: 278 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGF 336
Query: 170 SDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 229
+ +E++++F+ A+ILH+G + F + + + + A L +A L A
Sbjct: 337 TKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDLLKA 393
Query: 230 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIG 289
L+K + E++T+ + V S ALAK++Y R+F+W+V ++N ++ IG
Sbjct: 394 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIG 453
Query: 290 VLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQ 348
VLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +D Q
Sbjct: 454 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 513
Query: 349 DVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD---- 402
+DLIE KP GI+++L+E CMFPK+ ++F KL Q KN F+KP K +R +
Sbjct: 514 MCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPA 572
Query: 403 -FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXX 461
F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 573 HFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKK 632
Query: 462 XIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGV 514
S F+ L LM+ L +T PH++RC+ PN + +P + + V+ QL+C GV
Sbjct: 633 GKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGV 692
Query: 515 LEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK----GYQ 569
LE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+ Y+
Sbjct: 693 LEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--AGLQMDPAEYR 750
Query: 570 IGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
+G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L R
Sbjct: 751 LGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 809
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 371/659 (56%), Gaps = 39/659 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------GRSGVEGRTVEQQVLE 51
M+ + ++ S L++GESGAGKTE TK ++ YLA + EG ++E Q+++
Sbjct: 158 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEG-SLEDQIIQ 216
Query: 52 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 111
+NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERN
Sbjct: 217 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 276
Query: 112 YHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDIVGI 169
YH FY +C+ ++ L +P S + ++NQ C +D + D E+ A DI+G
Sbjct: 277 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGF 335
Query: 170 SDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 229
+ +E++++F+ A+ILH+G + F + + + + A L +A L A
Sbjct: 336 TKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDLLKA 392
Query: 230 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIG 289
L+K + E++T+ + V S ALAK++Y R+F+W+V ++N ++ IG
Sbjct: 393 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIG 452
Query: 290 VLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQ 348
VLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +D Q
Sbjct: 453 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 512
Query: 349 DVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD---- 402
+DLIE KP GI+++L+E CMFPK+ ++F KL Q KN F+KP K +R +
Sbjct: 513 MCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPA 571
Query: 403 -FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXX 461
F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 572 HFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKK 631
Query: 462 XIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGV 514
S F+ L LM+ L +T PH++RC+ PN + +P + + V+ QL+C GV
Sbjct: 632 GKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGV 691
Query: 515 LEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK----GYQ 569
LE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+ Y+
Sbjct: 692 LEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--AGLQMDPAEYR 749
Query: 570 IGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
+G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L R
Sbjct: 750 LGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 808
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 371/659 (56%), Gaps = 39/659 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------GRSGVEGRTVEQQVLE 51
M+ + ++ S L++GESGAGKTE TK ++ YLA + EG ++E Q+++
Sbjct: 163 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEG-SLEDQIIQ 221
Query: 52 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 111
+NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERN
Sbjct: 222 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 281
Query: 112 YHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDIVGI 169
YH FY +C+ ++ L +P S + ++NQ C +D + D E+ A DI+G
Sbjct: 282 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGF 340
Query: 170 SDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 229
+ +E++++F+ A+ILH+G + F + + + + A L +A L A
Sbjct: 341 TKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDLLKA 397
Query: 230 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIG 289
L+K + E++T+ + V S ALAK++Y R+F+W+V ++N ++ IG
Sbjct: 398 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIG 457
Query: 290 VLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQ 348
VLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +D Q
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 517
Query: 349 DVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD---- 402
+DLIE KP GI+++L+E CMFPK+ ++F KL Q KN F+KP K +R +
Sbjct: 518 MCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPA 576
Query: 403 -FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXX 461
F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 577 HFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKK 636
Query: 462 XIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGV 514
S F+ L LM+ L +T PH++RC+ PN + +P + + V+ QL+C GV
Sbjct: 637 GKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGV 696
Query: 515 LEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK----GYQ 569
LE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+ Y+
Sbjct: 697 LEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--AGLQMDPAEYR 754
Query: 570 IGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
+G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L R
Sbjct: 755 LGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 813
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 371/659 (56%), Gaps = 39/659 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------GRSGVEGRTVEQQVLE 51
M+ + ++ S L++GESGAGKTE TK ++ YLA + EG ++E Q+++
Sbjct: 163 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEG-SLEDQIIQ 221
Query: 52 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 111
+NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERN
Sbjct: 222 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 281
Query: 112 YHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDIVGI 169
YH FY +C+ ++ L +P S + ++NQ C +D + D E+ A DI+G
Sbjct: 282 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGF 340
Query: 170 SDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 229
+ +E++++F+ A+ILH+G + F + + + + A L +A L A
Sbjct: 341 TKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDLLKA 397
Query: 230 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIG 289
L+K + E++T+ + V S ALAK++Y R+F+W+V ++N ++ IG
Sbjct: 398 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIG 457
Query: 290 VLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQ 348
VLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +D Q
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 517
Query: 349 DVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD---- 402
+DLIE KP GI+++L+E CMFPK+ ++F KL Q KN F+KP K +R +
Sbjct: 518 MCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPA 576
Query: 403 -FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXX 461
F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 577 HFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKK 636
Query: 462 XIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGV 514
S F+ L LM+ L +T PH++RC+ PN + +P + + V+ QL+C GV
Sbjct: 637 GKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGV 696
Query: 515 LEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK----GYQ 569
LE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+ Y+
Sbjct: 697 LEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--AGLQMDPAEYR 754
Query: 570 IGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
+G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L R
Sbjct: 755 LGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 813
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/659 (38%), Positives = 371/659 (56%), Gaps = 39/659 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG---------GRSGVEGRTVEQQVLE 51
M+ + ++ S L++GESGAGKTE TK ++ YLA + EG ++E Q+++
Sbjct: 163 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEG-SLEDQIIQ 221
Query: 52 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 111
+NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERN
Sbjct: 222 ANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 281
Query: 112 YHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDIVGI 169
YH FY +C+ ++ L +P S + ++NQ C +D + D E+ A DI+G
Sbjct: 282 YHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGF 340
Query: 170 SDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 229
+ +E++++F+ A+ILH+G + F + + + + A L +A L A
Sbjct: 341 TKEEKQSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDLLKA 397
Query: 230 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIG 289
L+K + E++T+ + V S ALAK++Y R+F+W+V ++N ++ IG
Sbjct: 398 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIG 457
Query: 290 VLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQ 348
VLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +D Q
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 517
Query: 349 DVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD---- 402
+DLIE KP GI+++L+E CMFPK+ ++F KL Q KN F+KP K +R +
Sbjct: 518 MCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPA 576
Query: 403 -FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXX 461
F + HYAG V Y +L+KNKD + ALL A+K VA
Sbjct: 577 HFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKK 636
Query: 462 XIGSRFKL-------QLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGV 514
S F+ L LM+ L +T PH++RC+ PN + +P + + V+ QL+C GV
Sbjct: 637 GKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGV 696
Query: 515 LEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK----GYQ 569
LE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+ Y+
Sbjct: 697 LEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--AGLQMDPAEYR 754
Query: 570 IGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
+G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L R
Sbjct: 755 LGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 813
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/604 (39%), Positives = 341/604 (56%), Gaps = 30/604 (4%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 144 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 199
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 200 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 259
Query: 127 -AKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAIL 185
+ L SP +F YLN+ + + D +++ AM +G+ D+E+ +FRVVA +L
Sbjct: 260 RERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 319
Query: 186 HLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----E 240
HLGNIDF + KS L AELL D L +L RVM+T
Sbjct: 320 HLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGT 379
Query: 241 VITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFK 300
VI L A +RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+
Sbjct: 380 VIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFE 438
Query: 301 CNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGG 360
NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + G
Sbjct: 439 HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVG 498
Query: 361 IIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAG 410
I+ +LDE P+ + + F+ + Q + R S P+ S R D F I H+AG
Sbjct: 499 ILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAG 558
Query: 411 EVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIG 464
V Y+ F++KN D + ++L+ ++ F+ + +G
Sbjct: 559 AVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVG 618
Query: 465 SRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAG 524
++FK QL L++ L +T +IRC+KPN + FE ++ QL+C G++ + + G
Sbjct: 619 NKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 678
Query: 525 YPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQM 582
+P+R +F+E N + P+ L D ++ C+ + GL Y+ G TKVF R G+
Sbjct: 679 FPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKF 737
Query: 583 AELD 586
AE D
Sbjct: 738 AEFD 741
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/604 (39%), Positives = 341/604 (56%), Gaps = 30/604 (4%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 143 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 198
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 199 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 258
Query: 127 -AKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAIL 185
+ L SP +F YLN+ + + D +++ AM +G+ D+E+ +FRVVA +L
Sbjct: 259 RERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 318
Query: 186 HLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----E 240
HLGNIDF + KS L AELL D L +L RVM+T
Sbjct: 319 HLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGT 378
Query: 241 VITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFK 300
VI L A +RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+
Sbjct: 379 VIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFE 437
Query: 301 CNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGG 360
NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + G
Sbjct: 438 HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVG 497
Query: 361 IIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAG 410
I+ +LDE P+ + + F+ + Q + R S P+ S R D F I H+AG
Sbjct: 498 ILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAG 557
Query: 411 EVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIG 464
V Y+ F++KN D + ++L+ ++ F+ + +G
Sbjct: 558 AVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVG 617
Query: 465 SRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAG 524
++FK QL L++ L +T +IRC+KPN + FE ++ QL+C G++ + + G
Sbjct: 618 NKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 677
Query: 525 YPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQM 582
+P+R +F+E N + P+ L D ++ C+ + GL Y+ G TKVF R G+
Sbjct: 678 FPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKF 736
Query: 583 AELD 586
AE D
Sbjct: 737 AEFD 740
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/663 (37%), Positives = 370/663 (55%), Gaps = 44/663 (6%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT------------VEQQ 48
M+ + ++ S L++GESGAGKTE TK ++ YLA + V+ +T +E Q
Sbjct: 163 MVTDRENQSCLITGESGAGKTENTKKVIMYLAKVA--CAVKKKTSEEEEADQKKGSLEDQ 220
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
++++NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV
Sbjct: 221 IIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSA 280
Query: 109 ERNYHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDI 166
ERNYH FY +C+ ++ + L +P S + ++NQ C +D + D E+ A DI
Sbjct: 281 ERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDI 339
Query: 167 VGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSL 226
+G + +E+ ++F+ A+ILH+G + F + + + + A L +A L
Sbjct: 340 LGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDL 396
Query: 227 EDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKS 286
AL+K + E++T+ + + S AL+K++Y R+F+W+V+++N ++
Sbjct: 397 LKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTKAKRNY 456
Query: 287 IIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-I 345
IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +
Sbjct: 457 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGM 516
Query: 346 DNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD- 402
D Q +DLIE KP GI+++L+E CMFPK+ ++F Q KN F+KP K +R +
Sbjct: 517 DLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQ 575
Query: 403 ----FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA--------GXXXXX 450
F + HYAG V Y +LDKNKD + +LL +K VA
Sbjct: 576 GHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEPAGGAG 635
Query: 451 XXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLR 510
I + + L LM+ L +T PH++RC+ PN + +P + + V+ QL+
Sbjct: 636 GKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQ 695
Query: 511 CGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK--- 566
C GVLE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+
Sbjct: 696 CNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--TGLQMDP 753
Query: 567 -GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQS 625
Y++G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L
Sbjct: 754 SEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSV 813
Query: 626 FLR 628
R
Sbjct: 814 IQR 816
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/604 (39%), Positives = 340/604 (56%), Gaps = 30/604 (4%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ + +++E+NP+LEAFGNAKTVR
Sbjct: 143 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYDRIVEANPLLEAFGNAKTVR 198
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 199 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 258
Query: 127 -AKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAIL 185
+ L SP +F YLN+ + + D +++ AM +G+ D+E+ +FRVVA +L
Sbjct: 259 RERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 318
Query: 186 HLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE-----E 240
HLGNIDF + KS L AELL D L +L RVM+T
Sbjct: 319 HLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGT 378
Query: 241 VITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFK 300
VI L A +RDALAKT+YS LFD +V ++N + S IGVLDI GFE F+
Sbjct: 379 VIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFE 437
Query: 301 CNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGG 360
NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + G
Sbjct: 438 HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVG 497
Query: 361 IIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS--------RTD--FTILHYAG 410
I+ +LDE P+ + + F+ + Q + R S P+ S R D F I H+AG
Sbjct: 498 ILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAG 557
Query: 411 EVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV------AGXXXXXXXXXXXXXXXXXIG 464
V Y+ F++KN D + ++L+ ++ F+ + +G
Sbjct: 558 AVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVG 617
Query: 465 SRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAG 524
++FK QL L++ L +T +IRC+KPN + FE ++ QL+C G++ + + G
Sbjct: 618 NKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 677
Query: 525 YPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQM 582
+P+R +F+E N + P+ L D ++ C+ + GL Y+ G TKVF R G+
Sbjct: 678 FPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKF 736
Query: 583 AELD 586
AE D
Sbjct: 737 AEFD 740
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/660 (37%), Positives = 364/660 (55%), Gaps = 39/660 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR---------SGVEGRTVEQQVLE 51
M+ + ++ S L++GESGAGKTE+TK ++ Y A + + +E Q++E
Sbjct: 163 MVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEEPVPNLRASNLEDQIIE 222
Query: 52 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 111
+NPVLEAFGNAKTVRNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERN
Sbjct: 223 ANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERN 282
Query: 112 YHCFYLLCAAPHEDIAKYKLGSPKS--FHYLNQSNCYELDGVSDAHEYLATRRAMDIVGI 169
YH FY +C+ ++ + L +P S + ++NQ C +D + D E+ A DI+G
Sbjct: 283 YHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGF 341
Query: 170 SDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 229
+ +E+ ++F+ A+ILH+G + F + + + + A L +A L A
Sbjct: 342 TKEEKTSMFKCTASILHMGEMKFKQRPREEQA---ESDGTAEAEKVAFLCGINAGDLLKA 398
Query: 230 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIG 289
L+K + E++T+ + + S AL+K++Y R+F+W+V+++N ++ IG
Sbjct: 399 LLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTKAKRNYYIG 458
Query: 290 VLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQ 348
VLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F +D Q
Sbjct: 459 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQ 518
Query: 349 DVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKP-KLSRTD---- 402
+DLIE KP GI+++L+E CMFPK+ ++F Q KN F+KP K +R +
Sbjct: 519 MCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQGHA 577
Query: 403 -FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVA--------GXXXXXXXX 453
F + HYAG V Y +LDKNKD + +LL +K VA
Sbjct: 578 HFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEPAGGAGGKK 637
Query: 454 XXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGG 513
I + + L LM L T PH++RC+ PN P + + V+ QL+C G
Sbjct: 638 KKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPGLVDAELVLHQLQCNG 697
Query: 514 VLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLK----GY 568
VLE IRI G+P+R + EF R+ ILAP + +G D + + IL GL+ Y
Sbjct: 698 VLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL--TGLQMDPSEY 755
Query: 569 QIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLR 628
++G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L R
Sbjct: 756 RLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQR 815
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 347/588 (59%), Gaps = 23/588 (3%)
Query: 10 ILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNN 69
+++SGESGAGKTE +K +M++L ++ G + + +L+SNP+LEAFGNAKT+RN+N
Sbjct: 97 VIISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDN 156
Query: 70 SSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LLCAAPHEDIAK 128
SSRFGK++E+QF+ G G I YLLE+SRV + ER++H FY +L + +
Sbjct: 157 SSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDE 216
Query: 129 YKLG-SPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHL 187
L + ++ YL +S C+++ + D+ E+ +AM+ +G+ + +Q +I+R++AAILH+
Sbjct: 217 LGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHI 276
Query: 188 GNIDFAKGKEIDSSV----IKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE---- 239
GNI FA+ E + + D KS L A L+ D QSL AL R + T
Sbjct: 277 GNITFAEAAEQRTGTTTVKVSDTKS---LAAAASCLKTDQQSLSIALCYRSISTGVGKRC 333
Query: 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESF 299
EVI+ +D A SRDALAK +Y RLF+W+V KIN I + +IG+LDIYGFE F
Sbjct: 334 EVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEKGPVIGILDIYGFEVF 393
Query: 300 KCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPG 359
+ NSFEQ INF NEKLQQ F + K EQEEY RE I W IE+ +N+ + +LIEKKP
Sbjct: 394 QNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPI 453
Query: 360 GIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSR------TDFTILHYAGEVT 413
G+I+LLDEAC+ KST +TF +C+ F KN +S+ T F + HYAG+VT
Sbjct: 454 GLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVT 513
Query: 414 YQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQS 473
Y FLDKNKD + + + + ++ V G GS+F+ + +
Sbjct: 514 YDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTRPEDSKKRPETA-GSQFRNAMNA 572
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
L+ TL A +PHY+RC+K N+ + + + V Q+R G+LE +R+ AG+ R +
Sbjct: 573 LITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTR 632
Query: 534 FVNRFGILAPEVLEG-NYDDQVACQMILDKKGLKGYQI--GKTKVFLR 578
F NR+ +L + N + A ++IL + + +I GKTKVF+R
Sbjct: 633 FYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIR 680
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/658 (38%), Positives = 362/658 (55%), Gaps = 45/658 (6%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR-------------SGVEGRTVEQ 47
M+ + ++ S+L++GESGAGKTE TK +++Y A + + T+E
Sbjct: 163 MLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDKKEEEKKKDEKKGTLED 222
Query: 48 QVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISD 107
Q+++ NPVLEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV
Sbjct: 223 QIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETYLLEKSRVTYQQS 282
Query: 108 PERNYHCFY-LLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMD 165
ERNYH FY LL A E+I K + P + ++NQ +DG+ D E T A D
Sbjct: 283 AERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTL-TVDGIDDEEEMGLTDTAFD 341
Query: 166 IVGISDQEQEAIFRVVAAILHLGNIDFA-KGKEIDS-SVIKDEKSRFHLNMTA-ELLRCD 222
++G +D+E+ ++++ ILHLG + + +G++ ++ + EK F L + A +LL+C
Sbjct: 342 VLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEKVAFLLGVNAGDLLKC- 400
Query: 223 AQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
L+K + E +T+ + S ALAK++Y R+F+W+V ++N ++
Sbjct: 401 -------LLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWLVRRVNQTLDTKA 453
Query: 283 DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYI 342
+ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQEEY +E I W +I
Sbjct: 454 KRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIVWEFI 513
Query: 343 EF-IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKPK--- 397
+F +D Q ++LIE KP GI+++L+E CMFPK++ +F KL KN F KPK
Sbjct: 514 DFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYDNHLGKNPMFGKPKPPK 572
Query: 398 --LSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG-------XXX 448
+ F + HYAG V+Y +LDKNKD + LL +K V
Sbjct: 573 AGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIVKMLFTPPRILTP 632
Query: 449 XXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQ 508
I S K L LM+ L +T PH++RC+ PN + P + + V+ Q
Sbjct: 633 GGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPNELKTPGLIDAALVLHQ 692
Query: 509 LRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNY-DDQVACQMILDKKGLKG 567
LRC GVLE IRI G+P R + EF R+ ILAP + + D +V L L
Sbjct: 693 LRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADGKVVTDKALSALQLDP 752
Query: 568 --YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVIL 623
Y++G TKVF +AG + L+ R E L Q R Y+ RK + L++ + L
Sbjct: 753 NEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKAYKKLQDQRIGL 810
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 346/588 (58%), Gaps = 23/588 (3%)
Query: 10 ILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNN 69
+++SGESGAGKTE +K +M++L ++ G + + +L+SNP+LEAFGNAKT+RN+N
Sbjct: 97 VIISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDN 156
Query: 70 SSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFY-LLCAAPHEDIAK 128
SSRFGK++E+QF+ G G I YLLE+SRV + ER++H FY +L + +
Sbjct: 157 SSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDE 216
Query: 129 YKLG-SPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHL 187
L + ++ YL +S C+++ + D+ E+ +AM+ +G+ + +Q +I+R++AAILH+
Sbjct: 217 LGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHI 276
Query: 188 GNIDFAKGKEIDSSV----IKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPE---- 239
GNI FA+ E + + D KS L A L+ D QSL AL R + T
Sbjct: 277 GNITFAEAAEQRTGTTTVKVSDTKS---LAAAASCLKTDQQSLSIALCYRSISTGVGKRC 333
Query: 240 EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESF 299
VI+ +D A SRDALAK +Y RLF+W+V KIN I + +IG+LDIYGFE F
Sbjct: 334 SVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEKGPVIGILDIYGFEVF 393
Query: 300 KCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPG 359
+ NSFEQ INF NEKLQQ F + K EQEEY RE I W IE+ +N+ + +LIEKKP
Sbjct: 394 QNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPI 453
Query: 360 GIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSR------TDFTILHYAGEVT 413
G+I+LLDEAC+ KST +TF +C+ F KN +S+ T F + HYAG+VT
Sbjct: 454 GLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVT 513
Query: 414 YQANHFLDKNKDYVVAEHQALLTAAKCSFVAGXXXXXXXXXXXXXXXXXIGSRFKLQLQS 473
Y FLDKNKD + + + + ++ V G GS+F+ + +
Sbjct: 514 YDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTRPEDSKKRPETA-GSQFRNAMNA 572
Query: 474 LMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYE 533
L+ TL A +PHY+RC+K N+ + + + V Q+R G+LE +R+ AG+ R +
Sbjct: 573 LITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTR 632
Query: 534 FVNRFGILAPEVLEG-NYDDQVACQMILDKKGLKGYQI--GKTKVFLR 578
F NR+ +L + N + A ++IL + + +I GKTKVF+R
Sbjct: 633 FYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIR 680
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/658 (37%), Positives = 361/658 (54%), Gaps = 54/658 (8%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT------------VEQQ 48
M+ + + SIL +GESGAGKTE TK +++YLA + + T +E+Q
Sbjct: 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQ 222
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + +
Sbjct: 223 LLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKD 282
Query: 109 ERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIV 167
ER +H FY L A E + L ++ +L+ + + D + T AM I+
Sbjct: 283 ERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQETLEAMTIM 341
Query: 168 GISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLE 227
G +++EQ +I RVV+++L LGNI F K + D + + D TA C +
Sbjct: 342 GFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------TAAQKVCHLMGIN 393
Query: 228 DALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
R ++TP +V+ + A + +ALAK + RLF WI+ ++N ++ +
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 283 -DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSY 341
S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 342 IEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 398
I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q + +F K K
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 399 --SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG----------- 445
+T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 446 -------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+G +K QL LM TL T P+++RC+ PN+ +
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 557
+ V++QLRC GVLE IRI G+P R F EF R+ ILA + +G D + AC
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 558 MILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 613
+++ L Y+IG++K+F R G +A L+ R + + Q Q R Y+ARK F
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAF 811
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 269/774 (34%), Positives = 408/774 (52%), Gaps = 89/774 (11%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT------------VEQQ 48
M+ + + SIL +GESGAGKTE TK +++YLA + + T +E+Q
Sbjct: 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQ 222
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + +
Sbjct: 223 LLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKD 282
Query: 109 ERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIV 167
ER +H FY L A E + L ++ +L+ + + D + T AM I+
Sbjct: 283 ERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQETLEAMTIM 341
Query: 168 GISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLE 227
G +++EQ +I RVV+++L LGNI F K + D + + D TA C +
Sbjct: 342 GFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------TAAQKVCHLMGIN 393
Query: 228 DALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
R ++TP +V+ + A + +ALAK + RLF WI+ ++N ++ +
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 283 -DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSY 341
S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 342 IEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 398
I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q + +F K K
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 399 --SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG----------- 445
+T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 446 -------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+G +K QL LM TL T P+++RC+ PN+ +
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 557
+ V++QLRC GVLE IRI G+P R F EF R+ ILA + +G D + AC
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 558 MILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF-- 613
+++ L Y+IG++K+F R G +A L+ R + + Q Q R Y+ARK F
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAFAK 813
Query: 614 ---------ILLRNAAVILQSFLRGEMARKLYEQLR---------REAAALK-----IQT 650
++ RN A L+ LR +L+ +++ +E A++K ++
Sbjct: 814 RQQQLTAMKVIQRNCAAYLK--LRNWQWWRLFTKVKPLLQSAEREKEMASMKEEFTRLKE 871
Query: 651 NFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQ 704
A+R L + +++ + +N+ +L+ + + +A A+ RC Q
Sbjct: 872 ALEKSEARRKELEEKMVSLLQE--------KNDLQLQVQAEQDNLADAEERCDQ 917
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 269/774 (34%), Positives = 408/774 (52%), Gaps = 89/774 (11%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT------------VEQQ 48
M+ + + SIL +GESGAGKTE TK +++YLA + + T +E+Q
Sbjct: 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQ 222
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + +
Sbjct: 223 LLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKD 282
Query: 109 ERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIV 167
ER +H FY L A E + L ++ +L+ + + D + T AM I+
Sbjct: 283 ERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQETLEAMTIM 341
Query: 168 GISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLE 227
G +++EQ +I RVV+++L LGNI F K + D + + D TA C +
Sbjct: 342 GFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------TAAQKVCHLMGIN 393
Query: 228 DALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
R ++TP +V+ + A + +ALAK + RLF WI+ ++N ++ +
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 283 -DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSY 341
S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 342 IEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 398
I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q + +F K K
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 399 --SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG----------- 445
+T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 446 -------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+G +K QL LM TL T P+++RC+ PN+ +
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 557
+ V++QLRC GVLE IRI G+P R F EF R+ ILA + +G D + AC
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 558 MILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF-- 613
+++ L Y+IG++K+F R G +A L+ R + + Q Q R Y+ARK F
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAFAK 813
Query: 614 ---------ILLRNAAVILQSFLRGEMARKLYEQLR---------REAAALK-----IQT 650
++ RN A L+ LR +L+ +++ +E A++K ++
Sbjct: 814 RQQQLTAMKVIQRNCAAYLK--LRNWQWWRLFTKVKPLLQSAEREKEMASMKEEFTRLKE 871
Query: 651 NFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQ 704
A+R L + +++ + +N+ +L+ + + +A A+ RC Q
Sbjct: 872 ALEKSEARRKELEEKMVSLLQE--------KNDLQLQVQAEQDNLADAEERCDQ 917
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/630 (38%), Positives = 343/630 (54%), Gaps = 56/630 (8%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 143 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 198
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 199 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 258
Query: 127 -AKYKLGSPKSFHYLN--------------------------QSNCYELDGVSDAHEYLA 159
+ L SP +F YLN ++ + G+ D +++
Sbjct: 259 RERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSLKDPGLDDHGDFIR 318
Query: 160 TRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELL 219
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AELL
Sbjct: 319 MCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELL 378
Query: 220 RCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKI 274
D L +L RVM+T VI L A +RDALAKT+YS LFD +V ++
Sbjct: 379 GLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRV 438
Query: 275 NISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTR 334
N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y +
Sbjct: 439 NQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQK 497
Query: 335 EEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFS 394
E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R S
Sbjct: 498 EGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLS 557
Query: 395 KPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV- 443
P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 558 IPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIR 617
Query: 444 -----AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 618 ELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSH 677
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQM 558
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 678 HFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKA 736
Query: 559 ILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 737 LFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/658 (37%), Positives = 361/658 (54%), Gaps = 54/658 (8%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT------------VEQQ 48
M+ + + SIL +GESGAGKTE TK +++YLA + + T +E+Q
Sbjct: 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQ 222
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + +
Sbjct: 223 LLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKD 282
Query: 109 ERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIV 167
ER +H FY L A E + L ++ +L+ + + D + T AM I+
Sbjct: 283 ERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQETLEAMTIM 341
Query: 168 GISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLE 227
G +++EQ +I RVV+++L LGNI F K + D + + D TA C +
Sbjct: 342 GFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------TAAQKVCHLMGIN 393
Query: 228 DALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
R ++TP +V+ + A + +ALAK + RLF WI+ ++N ++ +
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 283 -DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSY 341
S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 342 IEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 398
I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q + +F K K
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 399 --SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG----------- 445
+T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 446 -------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+G +K QL LM TL T P+++RC+ PN+ +
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 557
+ V++QLRC GVLE IRI G+P R F EF R+ ILA + +G D + AC
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 558 MILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 613
+++ L Y+IG++K+F R G +A L+ R + + Q Q R Y+ARK F
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAF 811
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/658 (37%), Positives = 361/658 (54%), Gaps = 54/658 (8%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT------------VEQQ 48
M+ + + SIL +GESGAGKTE TK +++YLA + + T +E+Q
Sbjct: 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQ 222
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + +
Sbjct: 223 LLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKD 282
Query: 109 ERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIV 167
ER +H FY L A E + L ++ +L+ + + D + T AM I+
Sbjct: 283 ERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQETLEAMTIM 341
Query: 168 GISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLE 227
G +++EQ +I RVV+++L LGNI F K + D + + D TA C +
Sbjct: 342 GFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------TAAQKVCHLMGIN 393
Query: 228 DALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
R ++TP +V+ + A + +ALAK + RLF WI+ ++N ++ +
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 283 -DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSY 341
S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 342 IEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 398
I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q + +F K K
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 399 --SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG----------- 445
+T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 446 -------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+G +K QL LM TL T P+++RC+ PN+ +
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 557
+ V++QLRC GVLE IRI G+P R F EF R+ ILA + +G D + AC
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 558 MILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 613
+++ L Y+IG++K+F R G +A L+ R + + Q Q R Y+ARK F
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAF 811
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 343/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 144 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 199
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 200 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 259
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 260 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 318
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 319 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 378
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 379 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 438
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 439 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 497
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 498 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 557
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 558 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 617
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 618 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 677
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 678 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 736
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 737 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 343/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 143 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 198
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 199 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 258
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 259 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 317
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 318 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 377
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 378 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 437
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 438 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 496
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 497 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 556
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 557 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 616
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 617 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 676
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 677 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 735
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 736 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 343/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 153 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 208
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 209 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 268
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 269 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 327
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 328 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 387
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 388 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 447
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 448 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 506
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 507 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 566
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 567 SIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 626
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 627 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 686
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 687 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 745
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 746 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 343/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 140 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 195
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 196 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 255
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 256 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 314
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 315 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 374
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 375 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 434
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 435 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 493
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 494 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 553
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 554 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 613
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 614 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 673
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 674 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 732
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 733 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 343/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 153 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDRIVEANPLLEAFGNAKTVR 208
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 209 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 268
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 269 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 327
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 328 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 387
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 388 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 447
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 448 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 506
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 507 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 566
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 567 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 626
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 627 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 686
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 687 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 745
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 746 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 342/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ + +++E+NP+LEAFGNAKTVR
Sbjct: 143 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYDRIVEANPLLEAFGNAKTVR 198
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 199 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 258
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 259 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 317
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 318 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 377
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 378 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 437
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 438 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 496
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 497 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 556
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 557 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 616
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 617 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 676
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 677 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 735
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 736 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 343/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL S G+ ++ +++E+NP+LEAFGNAKTVR
Sbjct: 144 SQSIIVSGESGAGKTENTKFVLRYLT----ESYGTGQDIDDRIVEANPLLEAFGNAKTVR 199
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 200 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 259
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 260 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 318
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 319 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 378
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 379 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 438
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 439 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 497
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 498 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 557
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 558 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 617
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 618 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 677
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 678 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 736
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 737 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 342/631 (54%), Gaps = 58/631 (9%)
Query: 7 SNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVR 66
S SI+VSGESGAGKTE TK ++RYL G G+ + +++E+NP+LEAFGNAKTVR
Sbjct: 141 SQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYDRIVEANPLLEAFGNAKTVR 196
Query: 67 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 126
NNNSSRFGKFVEI F++ + G + YLLE+SR+C ERNYH FY LCA EDI
Sbjct: 197 NNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDI 256
Query: 127 -AKYKLGSPKSFHYLNQSNCYEL--------------------------DGVSDAH-EYL 158
+ L SP +F YLN+ C D + D H +++
Sbjct: 257 RERLHLSSPDNFRYLNRG-CTRYFANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFI 315
Query: 159 ATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAEL 218
AM +G+ D+E+ +FRVVA +LHLGNIDF + KS L AEL
Sbjct: 316 RMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAEL 375
Query: 219 LRCDAQSLEDALIKRVMVTPE-----EVITRTLDPVNAVASRDALAKTIYSRLFDWIVEK 273
L D L +L RVM+T VI L A +RDALAKT+YS LFD +V +
Sbjct: 376 LGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNR 435
Query: 274 INISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 333
+N + S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y
Sbjct: 436 VNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQ 494
Query: 334 REEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRF 393
+E + + + ++DNQD +DLIE + GI+ +LDE P+ + + F+ + Q + R
Sbjct: 495 KEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRL 554
Query: 394 SKPKLS--------RTD--FTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFV 443
S P+ S R D F I H+AG V Y+ F++KN D + ++L+ ++ F+
Sbjct: 555 SIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFI 614
Query: 444 ------AGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKP 497
+ +G++FK QL L++ L +T +IRC+KPN +
Sbjct: 615 RELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTS 674
Query: 498 SIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQ 557
FE ++ QL+C G++ + + G+P+R +F+E N + P+ L D ++ C+
Sbjct: 675 HHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCK 733
Query: 558 MILDKKGLK--GYQIGKTKVFLRAGQMAELD 586
+ GL Y+ G TKVF R G+ AE D
Sbjct: 734 ALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 764
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/649 (37%), Positives = 360/649 (55%), Gaps = 47/649 (7%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLES 52
M+ + ++ SIL++GESGAGKT TK +++Y A + +SG T+E Q++ +
Sbjct: 163 MLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISA 222
Query: 53 NPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNY 112
NP+LEAFGNAKTVRN+NSSRFGKF+ I F G+++ A I TYLLE+SRV ER+Y
Sbjct: 223 NPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSY 282
Query: 113 HCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGIS 170
H FY + + ++ L +P +HY++Q + + D E +AT A+DI+G S
Sbjct: 283 HIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSIDDQEELMATDSAIDILGFS 341
Query: 171 DQEQEAIFRVVAAILHLGNIDFAKGK-----EIDSSVIKDEKSRFHLNMTAELLRCDAQS 225
E+ AI+++ A++H GN+ F + + E D + + D+ + +AELL+
Sbjct: 342 ADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLNSAELLK----- 396
Query: 226 LEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSK 285
AL + E +T+ S ALAK +Y ++F W+V +IN + +
Sbjct: 397 ---ALCYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQ 453
Query: 286 SIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF- 344
IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEEY +E I W +I+F
Sbjct: 454 YFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFG 513
Query: 345 IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC-QTFAKNNRFSKPKLSR--- 400
+D ++LIEK P GI ++L+E CMFPK+T +F KL Q K+N F KPK ++
Sbjct: 514 MDLAACIELIEK-PMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKA 572
Query: 401 -TDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ-------ALLTAAKCSFVAGXXX 448
F+++HYAG V Y + +L+KNKD V+ +Q ALL A A
Sbjct: 573 EAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGG-EAEGGG 631
Query: 449 XXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQ 508
+ + F+ L LM L +T PH++RC+ PN P E+ V+ Q
Sbjct: 632 GKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQ 691
Query: 509 LRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL-APEVLEGNY-DDQVACQMILDKKGLK 566
LRC GVLE IRI G+P+R + +F R+ +L A + EG + D + A + +L +
Sbjct: 692 LRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGSIDVD 751
Query: 567 G--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 613
Y+ G TKVF +AG + L+ R + L + Q + R ++ R E+
Sbjct: 752 HTQYRFGHTKVFFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLMRVEY 800
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 247/628 (39%), Positives = 357/628 (56%), Gaps = 50/628 (7%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG----GR--SGVEGRTVEQQVLESNP 54
M+ + + SIL +GESGAGKTE TK +++YLA++ GR GV G +E+Q+L++NP
Sbjct: 140 MLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGRKEPGVPGE-LERQLLQANP 198
Query: 55 VLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHC 114
+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + + E ++H
Sbjct: 199 ILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHI 258
Query: 115 FYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQ 174
FY L E + L P S HY +N + + T ++ ++G S +E
Sbjct: 259 FYQLLGGAGEQLKADLLLEPCS-HYRFLTNGPSSSPGQERELFQETLESLRVLGFSHEEI 317
Query: 175 EAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRV 234
++ R+V+A+L GNI + + D + + D N A+ L C L R
Sbjct: 318 ISMLRMVSAVLQFGNIALKRERNTDQATMPD-------NTAAQKL-CRLLGLGVTDFSRA 369
Query: 235 MVTPEEVITRTLDPVNAVASR-------DALAKTIYSRLFDWIVEKINISIGQDP-DSKS 286
++TP + R D V ++ +ALAK Y RLF W+V ++N ++ + P S
Sbjct: 370 LLTPRIKVGR--DYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGAS 427
Query: 287 IIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-I 345
+G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++++F +
Sbjct: 428 FLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGL 487
Query: 346 DNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSR--T 401
D Q +DLIE+ P G++ALLDE C FPK+T ++F +K+ Q + +F +P+ R
Sbjct: 488 DLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQA 547
Query: 402 DFTILHYAGEVTYQANHFLDKNKDYV---VAE--HQAL--LTAAKCSFVAGXXXXXXXXX 454
DF++LHYAG+V Y+AN +L KN D + VA HQ+ LTA V G
Sbjct: 548 DFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSS 607
Query: 455 ---------XXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNV 505
+G +K L LM TL+ T P ++RC+ PN+ + E V
Sbjct: 608 LGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLV 667
Query: 506 IQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQMILDKKG 564
+ QLRC GVLE IRI G+P R F EF R+ IL P + +G D + AC+ ++
Sbjct: 668 LDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALE 727
Query: 565 LKG--YQIGKTKVFLRAGQMAELDARRA 590
L Y++G++K+F RAG +A+L+ RA
Sbjct: 728 LDPNLYRVGQSKIFFRAGVLAQLEEERA 755
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/634 (38%), Positives = 352/634 (55%), Gaps = 54/634 (8%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR-------SGVEGRT-----VEQQ 48
M+ + + SIL +GESGAGKTE TK +++YLA + S +G + +E+Q
Sbjct: 163 MLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQ 222
Query: 49 VLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDP 108
+L++NP+LEAFGNAKTV+N+NSSRFGKF+ I FD G I GA I TYLLE+SR + +
Sbjct: 223 LLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKD 282
Query: 109 ERNYHCFYLLCAAPHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIV 167
ER +H FY L A E + L ++ +L+ + + D + T AM I+
Sbjct: 283 ERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQETLEAMTIM 341
Query: 168 GISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLE 227
G +++EQ +I RVV+++L LGNI F K + D + + D TA C +
Sbjct: 342 GFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--------TAAQKVCHLMGIN 393
Query: 228 DALIKRVMVTP-----EEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDP 282
R ++TP +V+ + A + +ALAK + RLF WI+ ++N ++ +
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 283 -DSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSY 341
S +G+LDI GFE F+ NSFEQ CIN+TNEKLQQ FN +F +EQEEY RE I W++
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 342 IEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKL 398
I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q + +F K K
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 399 --SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAG----------- 445
+T+F ILHYAG+VTY A+ +L KN D + +LL + FVA
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 446 -------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPS 498
+G +K QL LM TL T P+++RC+ PN+ +
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 499 IFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNYDDQVACQ 557
+ V++QLRC GVLE IRI G+P R F EF R+ ILA + +G D + AC
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 558 MILDKKGLKG--YQIGKTKVFLRAGQMAELDARR 589
+++ L Y+IG++K+F R G +A L+ R
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/623 (37%), Positives = 353/623 (56%), Gaps = 36/623 (5%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRY---LAYLGGRSGVE---GR-TVEQQVLESN 53
M+ + ++ SIL++GESGAGKT TK +++Y +A +G RS + G+ T+E Q++++N
Sbjct: 165 MLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQAN 224
Query: 54 PVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYH 113
P LEAFGNAKTVRN+NSSRFGKF+ I F G+++ A I TYLLE+SRV ER+YH
Sbjct: 225 PALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYH 284
Query: 114 CFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISD 171
FY + + ++ L +P + +++Q + + DA E +AT A D++G +
Sbjct: 285 IFYQILSNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAEELMATDNAFDVLGFTS 343
Query: 172 QEQEAIFRVVAAILHLGNIDFA-KGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDAL 230
+E+ +++++ AI+H GN+ F K +E + E++ + +A L+ ++ L L
Sbjct: 344 EEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEA----DKSAYLMGLNSADLLKGL 399
Query: 231 IKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGV 290
+ E +T+ + + + ALAK +Y R+F+W+V +IN ++ + IGV
Sbjct: 400 CHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGV 459
Query: 291 LDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF-IDNQD 349
LDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEEY +E I W++I+F +D Q
Sbjct: 460 LDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQA 519
Query: 350 VLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQT-FAKNNRFSKPK----LSRTDFT 404
+DLIE KP GI+++L+E CMFPK+T TF KL K+ F KP+ F+
Sbjct: 520 CIDLIE-KPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFS 578
Query: 405 ILHYAGEVTYQANHFLDKNKD----YVVAEHQ----ALLTAAKCSFVAGXX--XXXXXXX 454
++HYAG V Y +L KNKD VV +Q LL+ ++
Sbjct: 579 LIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEKGKGKA 638
Query: 455 XXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGV 514
+ + + L LM L +T PH++RC+ PN P + +N V+ QLRC GV
Sbjct: 639 KKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGV 698
Query: 515 LEAIRISCAGYPTRRTFYEFVNRFGILAPEVL-EGNY-DDQVACQMILDKKGLKG--YQI 570
LE IRI G+P R + +F R+ IL P + EG + D + + +L + Y+
Sbjct: 699 LEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKF 758
Query: 571 GKTKVFLRAGQMAELDARRAEVL 593
G TKVF +AG + L+ R E L
Sbjct: 759 GHTKVFFKAGLLGLLEEMRDERL 781
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/649 (35%), Positives = 342/649 (52%), Gaps = 47/649 (7%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLES 52
M+ + ++ SIL++GESGAGKT T +++Y A + +SG T+E Q++ +
Sbjct: 166 MLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISA 225
Query: 53 NPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNY 112
NP+LEAFGNA TVRN+NSSRFG F+ I F G+++ A I TYLLE SRV ER+Y
Sbjct: 226 NPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSY 285
Query: 113 HCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGIS 170
H FY + + ++ L +P +HY+++ + + D E +AT A+DI+G S
Sbjct: 286 HIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELMATDSAIDILGFS 344
Query: 171 DQEQEAIFRVVAAILHLGNIDFAKGK-----EIDSSVIKDEKSRFHLNMTAELLRCDAQS 225
E AI+ + A++H GN+ F + + E D + + D + +AELL+ A
Sbjct: 345 ADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLK--ALC 402
Query: 226 LEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSK 285
+ VT E ++ + V A LA +Y +F W+V +IN + +
Sbjct: 403 YPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLWMVIRINQQLDTKQPRQ 456
Query: 286 SIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF- 344
IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQEEY E I W +I+F
Sbjct: 457 YFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFG 516
Query: 345 IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC-QTFAKNNRFSKPKLSR--- 400
+D ++LIE P GI ++L+E CMFPK+T +F L + K+N F KPK ++
Sbjct: 517 MDLAACIELIEX-PMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKA 575
Query: 401 -TDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ-------ALLTAAKCSFVAGXXX 448
F+++HYAG V Y + +L+ N D V+ +Q ALL A A
Sbjct: 576 EAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGG-EAEGGG 634
Query: 449 XXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQ 508
+ + F+ L LM L +T PH++RC+ PN P E+ V+ Q
Sbjct: 635 GKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQ 694
Query: 509 LRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL-APEVLEGNY-DDQVACQMILDKKGLK 566
LRC GVLE IRI G+P+R + +F R+ +L A + EG + D + A + +L +
Sbjct: 695 LRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVD 754
Query: 567 G--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 613
Y G T VF AG + L+ R + L Q + R ++ R E+
Sbjct: 755 HTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRVEY 803
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/649 (35%), Positives = 342/649 (52%), Gaps = 47/649 (7%)
Query: 1 MINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLES 52
M+ + ++ SIL++GESGAGKT T +++Y A + +SG T+E Q++ +
Sbjct: 163 MLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISA 222
Query: 53 NPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNY 112
NP+LEAFGNA TVRN+NSSRFG F+ I F G+++ A I TYLLE SRV ER+Y
Sbjct: 223 NPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSY 282
Query: 113 HCFYLLCAAPHEDIAKYKL--GSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGIS 170
H FY + + ++ L +P +HY+++ + + D E +AT A+DI+G S
Sbjct: 283 HIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELMATDSAIDILGFS 341
Query: 171 DQEQEAIFRVVAAILHLGNIDFAKGK-----EIDSSVIKDEKSRFHLNMTAELLRCDAQS 225
E AI+ + A++H GN+ F + + E D + + D + +AELL+ A
Sbjct: 342 ADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLK--ALC 399
Query: 226 LEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSK 285
+ VT E ++ + V A LA +Y +F W+V +IN + +
Sbjct: 400 YPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLWMVIRINQQLDTKQPRQ 453
Query: 286 SIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEF- 344
IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQEEY E I W +I+F
Sbjct: 454 YFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFG 513
Query: 345 IDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLC-QTFAKNNRFSKPKLSR--- 400
+D ++LIE P GI ++L+E CMFPK+T +F L + K+N F KPK ++
Sbjct: 514 MDLAACIELIEX-PMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKA 572
Query: 401 -TDFTILHYAGEVTYQANHFLDKNKD----YVVAEHQ-------ALLTAAKCSFVAGXXX 448
F+++HYAG V Y + +L+ N D V+ +Q ALL A A
Sbjct: 573 EAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGG-EAEGGG 631
Query: 449 XXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQ 508
+ + F+ L LM L +T PH++RC+ PN P E+ V+ Q
Sbjct: 632 GKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQ 691
Query: 509 LRCGGVLEAIRISCAGYPTRRTFYEFVNRFGIL-APEVLEGNY-DDQVACQMILDKKGLK 566
LRC GVLE IRI G+P+R + +F R+ +L A + EG + D + A + +L +
Sbjct: 692 LRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVD 751
Query: 567 G--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEF 613
Y G T VF AG + L+ R + L Q + R ++ R E+
Sbjct: 752 HTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRVEY 800
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 38.5 bits (88), Expect = 0.029, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 590 AEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAA 645
A+ L A +IQ+ R ++ RK ++ ++ AA+ +Q ++RG AR + LRR AA
Sbjct: 1 ADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
Score = 34.7 bits (78), Expect = 0.39, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 643 AAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAA 693
AA ++IQ R ++ ++ YL ++ +A+ +Q +R AR + +RTKAA
Sbjct: 6 AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 1183 IVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGL 1242
I+ N+ M++ ++ + + V T + ++++ FN L+++R S+ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 1243 AELEQWC--HDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLK--EITNDLCPVLSIQ 1298
LE+WC H T+ G+ + L+H+ Q L Q K T++ +I +C L+
Sbjct: 267 TRLEEWCKTHGLTD---GT--ECLQHLIQTAKLL---QVRKYTIEDIDILRGICYSLTPA 318
Query: 1299 QLYRISTMY 1307
QL ++ + Y
Sbjct: 319 QLQKLISQY 327
>pdb|2CH7|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of A Bacterial
Chemoreceptor From Thermotoga Maritima
Length = 309
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 831 EKINSLTAEVENLKGLLQS-------QTQTADEAKQAFTVSEAKNG-ELTKKLKDAEKRV 882
EK+NS+ VE + +LQ+ QT DE A T AKN E+T +K+ R+
Sbjct: 219 EKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEITTAMT-ENAKNAEEITNSVKEVNARL 277
Query: 883 DELQDSVQRLAEKVSNLESENQVLRQ 908
E+ S + + +V + Q+L++
Sbjct: 278 QEISASTEEVTSRVQTIRENVQMLKE 303
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 242 ITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFE 297
+ R LD A +A +T L W ++ N+ I + + + I LD++GFE
Sbjct: 200 VGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFE 255
>pdb|1KCF|A Chain A, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
pdb|1KCF|B Chain B, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
Length = 258
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 227 EDALIKRVMVTPEEVITRTL-------DPVNAVASRDALAKTIYSRLFDWIVEKINISIG 279
+D L++R++ +P +R L + AS++ +K I + +W VE + G
Sbjct: 24 KDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQNEDSKVI---IHNWSVENLTEKNG 80
Query: 280 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEY 332
LDI E F+ +S I N L + FN HV ME++ Y
Sbjct: 81 -----------LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRY 121
>pdb|3DZD|A Chain A, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
pdb|3DZD|B Chain B, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
Length = 368
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 10 ILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAK 63
+L++GESG GK +++ RY G + ++ Q++ ES E FG+ K
Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAES----ELFGHEK 204
>pdb|2YO3|A Chain A, Salmonella Enterica Sada 1185-1386 Fused To Gcn4 Adaptors
(Sadak14)
pdb|2YO3|B Chain B, Salmonella Enterica Sada 1185-1386 Fused To Gcn4 Adaptors
(Sadak14)
pdb|2YO3|C Chain C, Salmonella Enterica Sada 1185-1386 Fused To Gcn4 Adaptors
(Sadak14)
Length = 268
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 830 TEKINSLTAEVENLKGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQDSV 889
T +I +++A V + + +Q + + E +A T ++ K GE+ K+K E ++ +++D +
Sbjct: 182 TTRIGNVSAAVNDTDAVNYAQLKRSVE--EANTYTDQKMGEMNSKIKGVENKMKQIEDKI 239
Query: 890 QRLAEKVSNLESE 902
+ + K+ ++E+E
Sbjct: 240 EEILSKIYHIENE 252
>pdb|3EAF|A Chain A, Crystal Structure Of Abc Transporter, Substrate Binding
Protein Aeropyrum Pernix
Length = 391
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 121 APHEDIAK-YKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFR 179
P D+ K Y LG+ +F Y N+ Y DGV Y+ A + + +E FR
Sbjct: 15 GPTSDVGKGYSLGAELAFKYFNEKGIYTKDGVRVNINYIKRDYAYNPTTAEEYYRE--FR 72
Query: 180 ---VVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELL 219
V AI+ G D K + V D+ + + +A+LL
Sbjct: 73 DRYGVIAIIGWGTADTEK---LSDQVDTDKITYISASYSAKLL 112
>pdb|3BBN|E Chain E, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 308
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 555 ACQMILDKKGLKGYQIGKTKVFLRAGQMAELDARR 589
A ++ DKKG G +GK K + A Q A +DARR
Sbjct: 176 AIVVVGDKKGQVGVGVGKAKEVVSAVQKAAVDARR 210
>pdb|2CH7|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of A Bacterial
Chemoreceptor From Thermotoga Maritima
Length = 309
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 831 EKINSLTAEVENLKGLLQS-------QTQTADEAKQAFTVSEAKNGE-LTKKLKDAEKRV 882
EK+NS+ VE + +LQ+ Q DE A T AKN E +T +K+ R+
Sbjct: 219 EKLNSIVGAVERINEMLQNIAAAIEEQNAAVDEITTAMT-ENAKNAEEITNSVKEVNARL 277
Query: 883 DELQDSVQRLAEKVSNLESENQVLRQ 908
E+ S + + +V + Q+L++
Sbjct: 278 QEISASTEEVTSRVQTIRENVQMLKE 303
>pdb|4F4C|A Chain A, The Crystal Structure Of The Multi-Drug Transporter
Length = 1321
Score = 30.0 bits (66), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 2 INEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLE 51
+N G++ +++ G SG GK+ +L+RY L G+ ++G V LE
Sbjct: 441 VNAGQTVALV--GSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLE 488
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,177,060
Number of Sequences: 62578
Number of extensions: 1348959
Number of successful extensions: 4435
Number of sequences better than 100.0: 96
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3764
Number of HSP's gapped (non-prelim): 175
length of query: 1388
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1277
effective length of database: 8,027,179
effective search space: 10250707583
effective search space used: 10250707583
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)