BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000621
(1387 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 1719 bits (4452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 856/1402 (61%), Positives = 1084/1402 (77%), Gaps = 31/1402 (2%)
Query: 1 MVGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLME-GELVNKWLKM 59
+V LW+ RL G H +LIP+VVVPSD DEL++RLR+LF HV LME G+ V K
Sbjct: 144 VVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKKVRME 203
Query: 60 KDDKCDEIANVSNRLGSRNSYAVFCELNERKKG-------------EFKNGMHCVLKYL- 105
DDK ++A+ S++ G + + VF E+KK EF N M +L+YL
Sbjct: 204 IDDKSRQVASFSSKRGLK--FEVF----EKKKALEAERDLVVNRLDEFNNAMKSILRYLI 257
Query: 106 -DDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRR 164
D + D +V VF E +DW RI I+REC+RLEDGLPIY YR+ IL++
Sbjct: 258 GQDGYEFDVDDEDDEDVAVFSLEGA--YDWRRIHYLILRECRRLEDGLPIYAYRRQILKK 315
Query: 165 IYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGC 224
I+ EQI+VLIGETG GKSTQLVQFLADSG+AA +SIVCTQPRKIAA++L RVREES GC
Sbjct: 316 IHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSGC 375
Query: 225 YEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDL 284
YE+++V C P+FSS + SKV+YMTD+CLLQH+M DR LS ISC+I+DEAHERSLNTDL
Sbjct: 376 YEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDL 435
Query: 285 LLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGT 344
LLAL++ LL RR DLRLVIMSATADA+QLS+Y +DCGI HV GRNFPV++ Y P T
Sbjct: 436 LLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEEN 495
Query: 345 SAV---ASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQL 401
S V ASY DVV+M E+H TEKEGTILAFLTS+ EVEWACE+F APSA+ALP HG+L
Sbjct: 496 SVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGKL 555
Query: 402 SFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVC 461
SF+EQF VF++YPGRRKVIFATN+AETSLTIPGVK+VIDSGMVKES +EP TGM++L+VC
Sbjct: 556 SFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVC 615
Query: 462 RVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIR 521
+VSQSSA QRAGRAGRTEPGRCYRLYSK+DF++ LNQEPEI RVHLG+A+LR+LALGI
Sbjct: 616 QVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGID 675
Query: 522 DVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILS 581
++ F+F+DAP +AI MAI+NLVQLGA+ NGV ELT+EG LVKLG+EP+LGKLIL
Sbjct: 676 NIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILG 735
Query: 582 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREW 641
CFR R+G+EG+VLAAVMANASSIFCRVG+ D+K+KAD LKVQFC+ NGDLFTLLSVY+EW
Sbjct: 736 CFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEW 795
Query: 642 DSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDK 701
SLPR+ RNKWCWENS+NAKS+RRC+DT+KELE C+E+EL ++ PSYW+WNP++ T++DK
Sbjct: 796 ASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDK 855
Query: 702 WLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSV 761
+LK +IL++LAENVAM++GYDQLGYEVA+T Q VQLHPSCSLL FGQKP+WVVFGELLS+
Sbjct: 856 YLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSI 915
Query: 762 NNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGSILLKKFCGKSNSNVL 821
+QYLVCVTAFDF++L L P P FD S M+ ++L V+ + G S +LK+FCGKSN ++L
Sbjct: 916 VDQYLVCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKSNRSLL 975
Query: 822 SLVSRLRSTFMDERIGIEVNVDQNQILLFASSQDIEEVLGLVSDVLEYEKKWLHNECIEK 881
S+VSR RS DERIGI+V+VDQN+I L+AS D+E+V LV+D LE EKKW+ NEC+EK
Sbjct: 976 SIVSRARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRNECLEK 1035
Query: 882 CLYQGAGVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDDKELLMFLEKNASGSI 941
L+ G G P +ALFG+GA+IKHLE+++RFLTVDV++ +++DD+ELL FLEK G I
Sbjct: 1036 YLFHGRGQIP-IALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKKIDGCI 1094
Query: 942 CSIHKFAVG-QDSDEKDKWGRVTFLTPDTAGKATELNGVEYNGSLLKVVPSRATLGGDNK 1000
CSI+KFA QD DEK+KWGR+TFLTP++A KATE+ ++ GS+LKV PS +T GG K
Sbjct: 1095 CSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTGGGIFK 1154
Query: 1001 MYTFPAVKAKVYWPRRLSKGFAVVKCDATDVEFLVKDFFDLAIGGRYVRCEIGRRSMDAV 1060
M F +V AK+ WPR+ S G +KC + D+ ++ D L IG YV + + S D++
Sbjct: 1155 MPYFSSVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQLSNDSI 1214
Query: 1061 VISGLDKELSEDEILGELRKVTTRRIRDLFLVRGD-AVECPQFDAFEEALLREISRFMPK 1119
+ISGL +LSE E+L L T RR + F+ R +V+CP A EE L + I M
Sbjct: 1215 LISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMSA 1273
Query: 1120 RNSHANCCRVQVFPPEPKDAFMKAFITFDGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQ 1179
+N NC +VQVF P+ + FM+A I FDGRLHLEAAKAL++L G+VLPGC PWQK+KC+
Sbjct: 1274 KNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQKIKCE 1333
Query: 1180 QLFHSSLSCPASVYSVIKEELNSLLATLNRVNGAECVVERNYNGSYRVRISSNATKTVAD 1239
QLF SS+ C AS+Y+ +K +LN LLA R G EC +E +NG+YRV+I++ AT+ VA+
Sbjct: 1334 QLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYATRPVAE 1393
Query: 1240 LRRPVEELMRGRTVNHASLTPTILQHLFTRDGINLRKSLQQETRTFILFDRHTLSVKIFG 1299
+RR +EEL+RG+ +NH TP ++QHL +RDGINL + +QQET T+IL DRH L+V+I G
Sbjct: 1394 MRRELEELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLTVRICG 1453
Query: 1300 APDNIAEAQQKLIQSLLTYHESKQLEIHLRGGVLPPDLMKEVVRRFGPDLQGLKEKVPGA 1359
+ IA+A+Q+L+QSL+ YHESKQLEIHLRG + PDLMKEVV+RFGP+LQG+KEKV G
Sbjct: 1454 TSEKIAKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKEKVHGV 1513
Query: 1360 EFSLNTRRHVISVHGDRELKQK 1381
+ LNTR HVI VHG +E++Q+
Sbjct: 1514 DLKLNTRYHVIQVHGSKEMRQE 1535
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/668 (36%), Positives = 380/668 (56%), Gaps = 49/668 (7%)
Query: 150 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 209
+ LPIY ++++++ ++ Q+LV+IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 513 ESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVA 572
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A+RV EE GC + V F D+ + YMTD LL+ + D +LS+ S
Sbjct: 573 AMSVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSV 631
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
I++DEAHER+++TD+L L+K L+ RR DLRL++ SAT DA + S YF++C I + GR
Sbjct: 632 IMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRT 691
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 387
FPV++ Y Y+ + V ++H TE EG IL FLT + E++ AC+
Sbjct: 692 FPVEILYT------KQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYE 745
Query: 388 -------DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVI 439
+ P + LP + L + Q +F PG+RKV+ ATN+AE SLTI G+ +V+
Sbjct: 746 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVV 805
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLN 498
D G K++ + P G+ L + +SQ+SA QRAGRAGRT PG+CYRLY++S + P
Sbjct: 806 DPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPT 865
Query: 499 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 558
PEI R++LG+ L + A+GI D+ FDF+D P +A+ A+ L LGA+ G+
Sbjct: 866 SIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALD-EEGL-- 922
Query: 559 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 618
LT+ G+ + + +EP L K++L+ E L + A M +IF R +++ +AD
Sbjct: 923 LTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIA-MIQTGNIFYR--PREKQAQAD 979
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
+ +F GD TLL+VY W + + WC+EN + ++SLRR QD K+L + ++
Sbjct: 980 QKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMD 1037
Query: 679 K-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY---DQLGYEVAMTGQH 734
K +L ++ +T+ +++ I + F G Q GY + Q
Sbjct: 1038 KYKLDVVTAG------KNFTK----IRKAITAGF-----FFHGARKDPQEGYRTLVENQP 1082
Query: 735 VQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFDVSMME 792
V +HPS +L F ++P WV++ +L+ +Y+ VT D L L P + D + M
Sbjct: 1083 VYIHPSSAL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMS 1140
Query: 793 RKKLHVRV 800
++K R+
Sbjct: 1141 KRKRQERI 1148
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/651 (37%), Positives = 367/651 (56%), Gaps = 39/651 (5%)
Query: 143 RECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVC 202
R K + LPI+ R+ L+ + Q+LV+IGETG GK+TQ+ Q+LA++G I C
Sbjct: 499 RSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGC 558
Query: 203 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 262
TQPR++AA+S+++RV EE GC V F ++ + +MTD LL+ + D
Sbjct: 559 TQPRRVAAMSVSKRVAEEF-GCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDP 617
Query: 263 DLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGI 322
+LS S II+DEAHER+++TD+L L+K L RR +L+++I SAT +A + SKYF + +
Sbjct: 618 NLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQL 677
Query: 323 SHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 382
+ GR FPVD+RY A Y+ + V ++H +E G IL FLT + E++
Sbjct: 678 FIIPGRTFPVDIRYT------KDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDA 731
Query: 383 ACEKF---------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTI 432
AC+ + P + LP + L + Q +F+ + PG RKV+ ATN+AETSLTI
Sbjct: 732 ACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTI 791
Query: 433 PGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF 492
G+ +VID G K+ F P GM+ L V +SQ++A QR+GRAGRT PG+CYRLY++S F
Sbjct: 792 DGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAF 851
Query: 493 ETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 551
+ L PEI R +LG VL + A+GI D+ FDF+D P + + A+ L LGA+
Sbjct: 852 KNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALD 911
Query: 552 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSD 611
G+ LT G+ + + ++P+L K++++ E L + A M + ++F R
Sbjct: 912 -EEGL--LTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVA-MLSVQNVFYR--PK 965
Query: 612 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 671
+++ AD K +F GD TLL+VY W + + N WC+EN V A+SLRR QD K
Sbjct: 966 EKQALADQKKAKFFQPEGDHLTLLNVYESWKN--SKFSNPWCFENFVQARSLRRAQDVRK 1023
Query: 672 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 731
+L T +++ II + YT+ +++ I S N + + GY+ +
Sbjct: 1024 QLITIMDRYKLDIISAG-----RNYTK----IQKAICSGFFANASKKDPNE--GYKTLVE 1072
Query: 732 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
GQ V +HPS +L F + P WV++ EL+ +Y+ V D L L P
Sbjct: 1073 GQPVYIHPSSTL--FNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAP 1121
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/651 (35%), Positives = 363/651 (55%), Gaps = 40/651 (6%)
Query: 150 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 209
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 563 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 622
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 623 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 681
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
I++DEAHER+++TD+L L+K + +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 682 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 741
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 387
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 742 YPVEILYT------KEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 795
Query: 388 -------DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVI 439
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 796 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 855
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 856 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 915
Query: 500 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 558
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 916 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 972
Query: 559 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 618
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1029
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++ ++
Sbjct: 1030 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMD 1087
Query: 679 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 738
+ ++ + +++ I S N A Q GY + Q V +H
Sbjct: 1088 RHKLDVV---------SCGKSTVRVQKAICSGFFRNAA--KKDPQEGYRTLIDQQVVYIH 1136
Query: 739 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 789
PS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1137 PSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1184
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/651 (35%), Positives = 363/651 (55%), Gaps = 40/651 (6%)
Query: 150 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 209
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 587 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 646
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 647 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 705
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
I++DEAHER+++TD+L L+K + +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 706 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 765
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 387
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 766 YPVEILYT------KEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 819
Query: 388 -------DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVI 439
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 820 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 879
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 880 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 939
Query: 500 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 558
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 940 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 996
Query: 559 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 618
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 997 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1053
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++ ++
Sbjct: 1054 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMD 1111
Query: 679 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 738
+ ++ + +++ I S N A Q GY + Q V +H
Sbjct: 1112 RHKLDVV---------SCGKSTVRVQKAICSGFFRNAA--KKDPQEGYRTLIDQQVVYIH 1160
Query: 739 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 789
PS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1161 PSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1208
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 355/645 (55%), Gaps = 39/645 (6%)
Query: 150 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 209
+ LPI+ +++++ + QILV++GETG GK+TQ+ Q+ ++G+ I CTQPR++A
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVA 597
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A+RV EE GC V F D+ + YMTD LL+ + D DLS S
Sbjct: 598 AMSVAKRVAEEY-GCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSL 656
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
I++DEAHER+++TD+L L+K +R +L+L+I SAT D+ + S+YF + I + GR
Sbjct: 657 IMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRT 716
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 387
FPV++ Y + Y+ V ++H TE G +L FLT + E++ +CE
Sbjct: 717 FPVEILYT------REPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYE 770
Query: 388 -------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVI 439
D P + LP +G L + Q +F P G+RKV+ ATN+AETSLTI G+ +V+
Sbjct: 771 RMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVV 830
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D G VK+ + P +GM+ L V +SQ++A QR+GRAGRT PG+CYRLY++ F L
Sbjct: 831 DPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPT 890
Query: 500 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 558
PEI R +L +L++ A+GI ++ FDF+DAP ++ A+ L L A+ +G
Sbjct: 891 PVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSAL---DGDGL 947
Query: 559 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 618
LT+ G+ + + +EP L KL++ E L + A M N +IF R +++ AD
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVA-MLNVQNIFYR--PKEKQDHAD 1004
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
K +F GD TLL+VY W + WC+EN + +S++R QD K+L ++
Sbjct: 1005 QKKAKFHQPEGDHLTLLAVYNSWKN--HHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMD 1062
Query: 679 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 738
+ +++ +++ I S N A Q GY GQ+V +H
Sbjct: 1063 RHKLLMVSC---------GRDVSRVQKAICSGFFRNAAKRD--PQEGYRTLTDGQNVYIH 1111
Query: 739 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 783
PS + F Q+P WVV+ EL+ +Y+ VTA D L PS
Sbjct: 1112 PSSA--CFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPS 1154
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/654 (35%), Positives = 367/654 (56%), Gaps = 47/654 (7%)
Query: 146 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQ 204
K +GLP++ R+ L + QILVL+GETG GK+TQ+ Q+LA+ G ++ ++ CTQ
Sbjct: 504 KEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQ 563
Query: 205 PRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 264
PR++AA+S+A+RV EE GC + V F +++ YMTD L + + D L
Sbjct: 564 PRRVAAMSVAKRVAEEV-GCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622
Query: 265 SRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISH 324
S+ S II+DEAHER++ TD+L L+K + +R DL+L++ SAT DA + S YFY C I
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFT 682
Query: 325 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 384
+ GR++PV++ Y A Y+ + V ++H +E G IL FLT + E++ +C
Sbjct: 683 IPGRSYPVEIMYT------KQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSC 736
Query: 385 EKF---------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPG 434
E P V LP + L + Q +F+ + PG RKV+ ATN+AETSLTI G
Sbjct: 737 EILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDG 796
Query: 435 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 494
+ +V+D G VK+S F+P GM+ L V +SQ+ A QR+GRAGRT PG+CYRLY++S +
Sbjct: 797 IYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRN 856
Query: 495 RPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLN 553
L PEI R +L +L + A+GI D+ FDF+D P A+ + A++NL L A+ +
Sbjct: 857 EMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALD-D 915
Query: 554 NGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDE 613
G+ LT G+ + +EP+L K++++ E L + A M + +I+ R ++
Sbjct: 916 EGL--LTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIA-MLSVPNIWSR--PREK 970
Query: 614 KIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 673
+ +AD + QF + D TLL+VY W + R N WC+E+ + A+ +RR +D K+L
Sbjct: 971 QQEADRQRAQFANPESDHLTLLNVYTTW-KMNRCSDN-WCYEHYIQARGMRRAEDVRKQL 1028
Query: 674 ETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAE----NVAMFSGYDQLGYEVA 729
+++ ++ +E+IL AL NVA ++ Y+
Sbjct: 1029 IRLMDRYRHPVVSC-------------GRKRELILRALCSGYFTNVAKRDSHEGC-YKTI 1074
Query: 730 MTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 783
+ V +HPS ++FG+ WV++ EL+ + +Y+ V+ + L + P+
Sbjct: 1075 VENAPVYMHPSG--VLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPT 1126
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/647 (35%), Positives = 352/647 (54%), Gaps = 43/647 (6%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSIVCTQPRKIA 209
LP+Y Y+ D+L+ I Q+L+++ ETG GK+TQL QFL ++G + I CTQPR++A
Sbjct: 417 SLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVA 476
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A RV +E V F +A + + Y+TD LL+ F+ + DL+ S
Sbjct: 477 AMSVAARVAKEM-DVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSV 535
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
II+DEAHER+L+TD+L LVKD+ R DL+++I SAT DA + S YF + + +V GR
Sbjct: 536 IIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDA 389
+PVD+ Y P A+Y+ + + ++HTT+ G IL FLT + E+E E
Sbjct: 596 YPVDIYYTP------QPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 390 ---------PSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVI 439
P + P + L + Q +F + PG RKV+ ATN+AETS+TI GV FVI
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVI 709
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLN 498
DSG VK++ + P TGM L S++SA+QRAGRAGR PG+C+RLY++ + +
Sbjct: 710 DSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMV 769
Query: 499 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 558
PEI R +L VL + +LGI ++ FDF+DAP + + ++ L LGA+ N E
Sbjct: 770 TSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGAL---NNRGE 826
Query: 559 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 618
LT+ G+ + + +P L K +++ + E L + +++ ASS+F R D+ ++AD
Sbjct: 827 LTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYR--PKDKIMEAD 884
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
+ F GD TLL ++ EW + + W EN + KSL R +D +L E
Sbjct: 885 KARANFTQPGGDHLTLLHIWNEW--VDTDFSYNWARENFLQYKSLCRARDVRDQLANLCE 942
Query: 679 K-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLG--YEVAMTGQHV 735
+ E+ ++ S +P +K+ I + N A D+ G Y + Q V
Sbjct: 943 RVEIELVTNSSESLDP---------IKKAITAGYFSNAARL---DRSGDSYRTVKSNQTV 990
Query: 736 QLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
+HPS S + +KP +++ EL+ +Y +T + L + P
Sbjct: 991 YIHPSSS--VAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISP 1035
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/645 (35%), Positives = 352/645 (54%), Gaps = 42/645 (6%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIA 209
LP++ +R+++L I Q+L++ GETG GK+TQ+ Q+L + G + I CTQPR++A
Sbjct: 401 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 460
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S
Sbjct: 461 AMSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSV 519
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
++VDEAHER+L+TD+L L+KD+ R +L++++ SAT D + S +F D + + GR
Sbjct: 520 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 579
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD- 388
FPVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 580 FPVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 633
Query: 389 --------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 439
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 634 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVL 693
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 694 DPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE-LEE 752
Query: 500 E--PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVF 557
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N +
Sbjct: 753 TTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLG 809
Query: 558 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 617
ELT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + A
Sbjct: 810 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHA 867
Query: 618 DCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL 677
D +V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE L
Sbjct: 868 DNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLL 925
Query: 678 EKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 737
E+ + + + S +Y + K I + GY Q V +
Sbjct: 926 ER-VEVGLSSC-------QGDYIRVRKAITAGYFYHTARLTRS----GYRTVKQQQTVFI 973
Query: 738 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
HP+ SL F Q+P W+++ EL+ +++ V + L + P
Sbjct: 974 HPNSSL--FEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1016
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/645 (35%), Positives = 352/645 (54%), Gaps = 42/645 (6%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIA 209
LP++ +R+++L I Q+L++ GETG GK+TQ+ Q+L + G + I CTQPR++A
Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 457
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S
Sbjct: 458 AMSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSV 516
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
++VDEAHER+L+TD+L L+KD+ R +L++++ SAT D + S +F D + + GR
Sbjct: 517 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 576
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD- 388
FPVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 577 FPVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 630
Query: 389 --------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 439
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 631 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVL 690
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 691 DPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE-LEE 749
Query: 500 E--PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVF 557
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N +
Sbjct: 750 TTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLG 806
Query: 558 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 617
ELT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + A
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHA 864
Query: 618 DCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL 677
D +V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE L
Sbjct: 865 DNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLL 922
Query: 678 EKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 737
E+ + + + S +Y + K I + GY Q V +
Sbjct: 923 ER-VEVGLSSC-------QGDYIRVRKAITAGYFYHTARLTRS----GYRTVKQQQTVFI 970
Query: 738 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
HP+ SL F Q+P W+++ EL+ +++ V + L + P
Sbjct: 971 HPNSSL--FEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1013
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/644 (34%), Positives = 357/644 (55%), Gaps = 42/644 (6%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
LPI+ +Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 212 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 270
S+A+RV EE G ++ + Y F ++ + YMTD LL+ + + DL S I
Sbjct: 592 SVAKRVSEEMGGNLGEE--VGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAI 649
Query: 271 IVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 330
I+DEAHERSLNTD+L L+++++ RR DL+L++ SAT DA + + +F + I H+ GR F
Sbjct: 650 IMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTF 709
Query: 331 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--- 387
PVD+ + + YV V+ +VH + G IL F+ + ++E ++
Sbjct: 710 PVDILF------SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEH 763
Query: 388 -----DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 441
+AP+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDS
Sbjct: 764 LEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 442 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE- 500
G K F P GM+ L++ +SQ++ANQR+GRAGRT PG+C+RLY++S ++ L
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 501 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 560
PEI R +L VL + +LG++D+ F F+D P + ++ L LGA+ G LT
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LT 940
Query: 561 EEGKFLVKLGIEPRLGK-LILSCFRRRLG-REGLVLAAVMANASSIFCRVGSDDEKIKAD 618
G+ +V+ ++P L K LI+SC +G ++L M + +IF R +E ++D
Sbjct: 941 STGRLMVEFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREE--ESD 995
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
++ +F D T L+VY +W + WC ++ ++AK++R+ ++ +L+ +
Sbjct: 996 QIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMV 1053
Query: 679 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 738
++ + W+ +++ I +A A G + Y TG LH
Sbjct: 1054 QQRMSLASCGTDWD---------IVRKCICAAYFHQAAKLKGIGE--YVNIRTGMPCHLH 1102
Query: 739 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
P+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L P
Sbjct: 1103 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1146
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/645 (35%), Positives = 352/645 (54%), Gaps = 42/645 (6%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIA 209
LP++ +R+++L + QIL++ GETG GK+TQ+ Q+L + G + I CTQPR++A
Sbjct: 402 SLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVA 461
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S
Sbjct: 462 AMSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSV 520
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
++VDEAHER+L+TD+L L+KD+ R +L++++ SAT D + S +F D + + GR
Sbjct: 521 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD- 388
FPVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 581 FPVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 634
Query: 389 --------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 439
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 635 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVL 694
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 695 DPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEE 753
Query: 500 E--PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVF 557
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N +
Sbjct: 754 TTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLG 810
Query: 558 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 617
ELT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + A
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHA 868
Query: 618 DCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL 677
D +V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE L
Sbjct: 869 DNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLL 926
Query: 678 EKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 737
E+ + + + S +Y + K I + GY Q V +
Sbjct: 927 ER-VEVGLSSC-------QGDYIRVRKAITAGYFYHTARLTRS----GYRTVKQQQTVFI 974
Query: 738 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
HP+ SL F ++P W+++ EL+ +++ V + L + P
Sbjct: 975 HPNSSL--FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1017
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 365 bits (938), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 356/644 (55%), Gaps = 42/644 (6%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
LPI+ +Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 212 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 270
S+A+RV EE G ++ + Y F + + YMTD LL+ + + DL S I
Sbjct: 592 SVAKRVSEEMGGNLGEE--VGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAI 649
Query: 271 IVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 330
I+DEAHERSLNTD+L L+++++ RR DL+L++ SAT DA + + +F + I H+ GR F
Sbjct: 650 IMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTF 709
Query: 331 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--- 387
PVD+ + + YV V+ +VH + G IL F+ + ++E ++
Sbjct: 710 PVDILF------SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEH 763
Query: 388 -----DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 441
+AP+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDS
Sbjct: 764 LEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 442 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE- 500
G K F P GM+ L++ +SQ++ANQR+GRAGRT PG+C+RLY++S ++ L
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 501 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 560
PEI R +L VL + +LG++D+ F F+D P + ++ L LGA+ G LT
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LT 940
Query: 561 EEGKFLVKLGIEPRLGK-LILSCFRRRLG-REGLVLAAVMANASSIFCRVGSDDEKIKAD 618
G+ +V+ ++P L K LI+SC +G ++L M + +IF R +E ++D
Sbjct: 941 STGRLMVEFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREE--ESD 995
Query: 619 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 678
++ +F D + L+VY +W + WC ++ ++AK++R+ ++ +L+ +
Sbjct: 996 QIREKFAVPESDHLSYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMV 1053
Query: 679 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 738
++ + W+ +++ I +A A G + Y TG LH
Sbjct: 1054 QQRMSLASCGTDWD---------IVRKCICAAYFHQAAKLKGIGE--YVNIRTGMPCHLH 1102
Query: 739 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
P+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L P
Sbjct: 1103 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1146
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 363 bits (933), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 230/666 (34%), Positives = 356/666 (53%), Gaps = 51/666 (7%)
Query: 133 DWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS 192
D S ++E ++ LP+Y YR+ ++ + Q+L+++GETG GK+TQ+ Q+L ++
Sbjct: 451 DGSAQAKMTIQEVRK---SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEA 507
Query: 193 GIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDH 252
G + I CTQPR++AA+S+A RV EE GC + V F + + YMTD
Sbjct: 508 GFSKTGKIGCTQPRRVAAMSVAARVAEEV-GCKLGNEVGYSIRFEDCTSQKTVLQYMTDG 566
Query: 253 CLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQ 312
L++ F+ DL+ S +I+DEAHER+L+TD+L L+KD+ R DL+L+I SAT DA +
Sbjct: 567 MLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAER 626
Query: 313 LSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 372
S YF ++ GR + V Y A Y+ V V ++H TE G IL
Sbjct: 627 FSDYFDGAPTFNIPGRKYEVTTHYTQAPEA------DYLDAAVVTVLQIHITEPLGDILV 680
Query: 373 FLTSKMEVEWACEKFDAPSA---------VALPFHGQLSFDEQFCVFK-SYPGRRKVIFA 422
FLT + EV+ A E + + + L D Q +F+ + P RKV+ A
Sbjct: 681 FLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLA 740
Query: 423 TNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGR 482
TN+AETSLTI G+ +VID G K+ F P TGM L + VS++SANQR GRAGR PG+
Sbjct: 741 TNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGK 800
Query: 483 CYRLYSKSDFETR-PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAI 541
C+RL++ F+ N PEI R +LG VL + ++GI D+ FDF+D P A+ + A+
Sbjct: 801 CFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAAL 860
Query: 542 RNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANA 601
L LGA+ N +LT+ G+ + + ++P+L K+I++ + + E L + A+++
Sbjct: 861 EQLYALGAL---NDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVG 917
Query: 602 SSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN--KWCWENSVN 659
++IF R D+ AD + F H GD TL++V+ +W RE +WC+EN +
Sbjct: 918 NTIFYR--PKDKAFAADAARKLFFHPQGDHLTLMNVFNQW----RESGYAVQWCFENFIQ 971
Query: 660 AKSLRRCQDTIKELETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMF 718
+S++R QD +LE LE+ E+ ++ + D +++ I S N A
Sbjct: 972 HRSMKRAQDVRDQLELLLERVEIPLV---------SNVDDTDS-IRKCIASGFFYNSAKL 1021
Query: 719 --SGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 776
SG + Q VQ+HPS L F P WVV+ EL+ +++ +
Sbjct: 1022 EKSGL----FRTTKHNQSVQIHPSSCL--FQSPPKWVVYHELVLTTKEFMRQIVEIQSSW 1075
Query: 777 LSTLCP 782
L + P
Sbjct: 1076 LHEIAP 1081
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 359 bits (921), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 356/648 (54%), Gaps = 47/648 (7%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI-AAEQSIVCTQPRKIA 209
LP+Y +R + + Q+L++ GETG GK+TQL Q+L ++G + I CTQPR++A
Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422
Query: 210 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
A+S+A RV +E GC V F + + YMTD LL+ F+N+ DL+ S
Sbjct: 423 AMSVAARVADEV-GCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSV 481
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 329
+++DEAHER+L+TD+L LVKD+ R DL+L+I SAT DA + S +F D I + GR
Sbjct: 482 MMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRR 541
Query: 330 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEVEWACEKFD 388
FPVD+ Y + A YV + + ++H T+ G IL FLT + E+E E
Sbjct: 542 FPVDIYYT------QAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALM 595
Query: 389 APSA---------VALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFV 438
S + LP + L D Q +F+ P RKV+ ATN+AETS+TI G+ +V
Sbjct: 596 ERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYV 655
Query: 439 IDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYS----KSDFET 494
ID G K++ F+ +G+ L V +S+++ANQRAGRAGRT PG+C+RLY+ K + E
Sbjct: 656 IDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEE 715
Query: 495 RPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 554
+P+ PEI R +LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N
Sbjct: 716 QPI---PEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGAL---N 769
Query: 555 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 614
ELT+ G+ + + +P + K+I++ + E + +AA+++ +++F R + +
Sbjct: 770 HRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKA--QV 827
Query: 615 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELE 674
I AD + F GD TL++VY +W +R WC EN V ++++R +D +L
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQR--WCVENYVQHRTMKRARDVRDQLV 885
Query: 675 TCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQH 734
LE+ + I + + K +++ I + NV S D G+ + +H
Sbjct: 886 GLLER---VEIETKSSTDTIK-------IRKAITAGYFYNV---SKLDNTGHYKTVKHKH 932
Query: 735 VQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
HP + +F + P WVV+ EL+ + +++ ++ + L + P
Sbjct: 933 T-THPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAP 979
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 358 bits (919), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 350/651 (53%), Gaps = 37/651 (5%)
Query: 143 RECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVC 202
+ K+ + LP++ RQ ++ I +++++GETG GK+TQL Q+L + G I C
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGC 491
Query: 203 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 262
TQPR++AA+S+A+RV +E G V F + + YMTD LL+ + D
Sbjct: 492 TQPRRVAAMSVARRVADEM-GVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDG 550
Query: 263 DLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFY-DCG 321
L + S II+DEAHERSLNTD+L L+++++ +R DL+L++ SAT DA + + +F +C
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCP 610
Query: 322 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 381
+ GR FPV++ + + V YV V+ +H +G IL F+ + ++E
Sbjct: 611 TFTIPGRTFPVELFH------ARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIE 664
Query: 382 WACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSYPG-RRKVIFATNVAETSLTI 432
CE +AP LP + QL D Q +F+ PG RK I ATN+AETSLT+
Sbjct: 665 CTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTV 724
Query: 433 PGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF 492
G+ FVID G K + P GM+ L + VSQ+SANQR GRAGRT PG+CYRLY++ F
Sbjct: 725 DGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQF 784
Query: 493 ETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 551
+ L PEI R +L VL + +LG+ D+ F F+DAP + ++ L LGA+
Sbjct: 785 KDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALD 844
Query: 552 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSD 611
N G +LT G+ +V+ ++P L K+++ E L + ++++ + F G +
Sbjct: 845 -NTG--QLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGRE 901
Query: 612 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 671
+E AD K +F D T L+VY +W + + KWC +N ++ K+L++ ++
Sbjct: 902 EE---ADAKKEKFQVPESDHLTFLNVYIQWRT--HKYSAKWCADNYLHVKALKKVREVRA 956
Query: 672 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 731
+L+ ++ +I + W+ +++ I SA N A G + Y T
Sbjct: 957 QLKEIMQDLKLPLISNGSEWD---------IVRKCICSAYFHNAARLKGIGE--YVNVRT 1005
Query: 732 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
G LHP+ +L G P +VV+ EL+ +Y+ CVTA D L+ L P
Sbjct: 1006 GIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGP 1056
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 358 bits (919), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 232/652 (35%), Positives = 358/652 (54%), Gaps = 57/652 (8%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 210
LP++ ++D ++ I Q+++L+GETG GK+TQ+ QF+ D+G+ +V TQPR++AA
Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAA 136
Query: 211 ISLAQRVREES--RGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 268
IS+A+RV EE E I + SSA+ F + Y+TD LL+ M+D L++
Sbjct: 137 ISVAKRVSEEMDFELGEEVGYSIRFEELSSARTF---MKYLTDGMLLRESMSDPTLNKYD 193
Query: 269 CIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 328
II+DEAHER+L+TD+L L+KD+L RR DL+L++MSAT +A + KYF + + V GR
Sbjct: 194 VIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGR 253
Query: 329 NFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD 388
PV++ Y A Y+ VR V ++HT E G IL FLT + E+E C K
Sbjct: 254 LHPVEIFYT------EEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQ 307
Query: 389 -------APSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDS 441
P LP + L +Q +F + RK I +TN+AETSLTI G+ FV+D
Sbjct: 308 RETRERGLPPMKTLPLYSSLPIYQQSKIFDTC-KERKCIVSTNIAETSLTIDGIVFVVDP 366
Query: 442 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ-E 500
G K+ + P + + L V +S++SANQRAGRAGRT PG+C+RLY++ F+ + Q
Sbjct: 367 GFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTH 426
Query: 501 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 560
PEI R +L VL++L LG+ D+ FDF+D P + A+ L LGA+ + G +LT
Sbjct: 427 PEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALD-DEG--QLT 483
Query: 561 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 620
E G + + ++P+L K+++ R E L +AA+++ + C + D +I+AD
Sbjct: 484 EIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPN---CFMRPKDNRIEADSA 540
Query: 621 KVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 680
K F H +GD T+L+VY + E WC++N +N +++++ D+++ +
Sbjct: 541 KKSFDHFDGDHLTMLNVYHSFKK--NGEDPTWCYDNFLNHRAIKQA-DSVRS-------Q 590
Query: 681 LAIIIPSYWL------WNPHKYTEYDKWLKEIILSALAENVAMFSG---YDQLGYEVAMT 731
LA I+ + L N Y E +K+ I + VA Y LG E
Sbjct: 591 LARILTRFKLPLVSGDVNSKFYYEN---IKKCIAAGFFMQVAKCEKKNIYFTLGDE---- 643
Query: 732 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 783
Q V HPS L ++P + ++ E + + Y+ +T FD L L PS
Sbjct: 644 -QSVIFHPSTGL---TRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPS 691
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 355 bits (912), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 364/698 (52%), Gaps = 56/698 (8%)
Query: 127 EDCQRFDWSRIQAFIVRECK-------RLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 179
E+ Q+ + +I F RE ++ LP++ R + L+ QI+V +GETG
Sbjct: 61 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS 120
Query: 180 GKSTQLVQF-LADSGIAAEQS-IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFS 237
GK+TQ+ QF L D E + + CTQPR++AA+S+AQRV EE + V F
Sbjct: 121 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEM-DVKLGEEVGYSIRFE 179
Query: 238 SAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRF 297
+ + + YMTD LL+ M D DLSR SCII+DEAHER+L TD+L+ L+K ++ RR
Sbjct: 180 NKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRP 239
Query: 298 DLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRM 357
DL+++IMSAT DA + +YF D + V GR +PV++ Y P Y+ +R
Sbjct: 240 DLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTP------EFQRDYLDSAIRT 293
Query: 358 VGEVHTTEKEGTILAFLTSKMEVEWACEKFD------------APSAVALPFHGQLSFDE 405
V ++H TE+ G IL FLT + E+E A K P +V P +G L +
Sbjct: 294 VLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSV-YPLYGSLPPHQ 352
Query: 406 QFCVFKSYP----GR--RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLR 459
Q +F+ P GR RKV+ +TN+AETSLTI G+ +V+D G K+ + P + L
Sbjct: 353 QQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLL 412
Query: 460 VCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILAL 518
V +S++SA QRAGRAGRT PG+C+RLY++ F+ + Q PEI R +L VL + L
Sbjct: 413 VSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKL 472
Query: 519 GIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL 578
GI D+ FDF+D P A E +R L +L + + LT G+ + ++P L +
Sbjct: 473 GIDDLVHFDFMDPP---APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVM 529
Query: 579 ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVY 638
++ F + +E L + A M + ++F R D K +AD K F H +GD TLL+VY
Sbjct: 530 LIGSFEFQCSQEILTIVA-MLSVPNVFIRPTKD--KKRADDAKNIFAHPDGDHITLLNVY 586
Query: 639 REWDSLPREER--NKWCWENSVNAKSLRRCQDTIKELETCLEK-ELAIIIPSYWLWNPHK 695
+ S E +KWC ++ +N +SL + +LE + + L + Y K
Sbjct: 587 HAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDY---ESPK 643
Query: 696 YTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVF 755
Y +D K + + SG GY Q V +HPS + G WV++
Sbjct: 644 Y--FDNIRKALASGFFMQVAKKRSGAK--GYITVKDNQDVLIHPST---VLGHDAEWVIY 696
Query: 756 GELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMER 793
E + + Y+ VT+ + L + P+ +D+S ++
Sbjct: 697 NEFVLTSKNYIRTVTSVRPEWLIEIAPA-YYDLSNFQK 733
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 353 bits (906), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 227/664 (34%), Positives = 348/664 (52%), Gaps = 47/664 (7%)
Query: 140 FIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA--AE 197
F + E +R LP+Y R++ L+ + QI+V +GETG GK+TQ+ QF+ +
Sbjct: 66 FKILETRR---ELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTN 122
Query: 198 QSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQH 257
I CTQPR++AA+S+A+RV +E + V F ++ + YMTD LL+
Sbjct: 123 TQIACTQPRRVAAMSVAKRVADEM-DVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLRE 181
Query: 258 FMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYF 317
M D LSR SCII+DEAHER+L TD+L+ L+K L RR DL++++MSAT DA + KYF
Sbjct: 182 AMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYF 241
Query: 318 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSK 377
+D + V GR +PV++ Y Y+ +R V ++H E G IL FLT +
Sbjct: 242 FDAPLLAVPGRTYPVEIYYT------QEPERDYLEAALRTVLQIHVEEGPGDILVFLTGE 295
Query: 378 MEVEWACEKFD-----------APSAVALPFHGQLSFDEQFCVFKSYPGR------RKVI 420
E+E AC K A P +G L ++Q +F+ P RKV+
Sbjct: 296 EEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVV 355
Query: 421 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 480
+TN+AETSLTI G+ +V+D G K+ + P + L V +S++SA QRAGRAGRT P
Sbjct: 356 ISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRP 415
Query: 481 GRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEM 539
G+C+RLY++ F + Q PEI R +L VL + LGI D+ FD++D P+ + +
Sbjct: 416 GKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMR 475
Query: 540 AIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 599
A+ L L + +NG +LT G+ + ++P L +++ E L L A+++
Sbjct: 476 ALEELNYLNCLD-DNG--DLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLS 532
Query: 600 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 659
++F R S + AD ++ QF H +GD TLL+VY + S E WCW + ++
Sbjct: 533 -VPNVFVRPNS--ARKLADEMRQQFTHPDGDHLTLLNVYHAYKS--GEGTADWCWNHFLS 587
Query: 660 AKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFS 719
++L + K+L +E++ +I + P Y ++ ++S VA S
Sbjct: 588 HRALISADNVRKQLRRTMERQEVELIST-----PFDDKNYYVNIRRALVSGFFMQVAKKS 642
Query: 720 GYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLST 779
+ Y Q V LHPSC L + P WVV+ E + ++ VTA + L
Sbjct: 643 ANGK-NYVTMKDNQVVSLHPSCGLSV---TPEWVVYNEFVLTTKSFIRNVTAIRPEWLIE 698
Query: 780 LCPS 783
L P+
Sbjct: 699 LAPN 702
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 347 bits (891), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 227/690 (32%), Positives = 370/690 (53%), Gaps = 48/690 (6%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
LP+Y R ++++ + Q LV++GETG GK+TQ+ Q+L + G + I CTQPR++AA+
Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542
Query: 212 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 271
S+A+RV EE GC V F D+++ YMTD L + + D ++S+ S I+
Sbjct: 543 SVAKRVAEEV-GCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIM 601
Query: 272 VDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 331
+DEAHER++ TD+L AL+K +R +L++++ SAT ++ + S+YF +C I ++ G+ FP
Sbjct: 602 LDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFP 661
Query: 332 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE-KFDAP 390
V+V Y + Y+ + V ++H E G IL FLT + E++ CE +D
Sbjct: 662 VEVLY------SQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 391 SAVA--------LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 441
+ LP + L + Q +F+ P G RKV+FATN+AETS+TI G+ +V+D
Sbjct: 716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDP 775
Query: 442 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-NQE 500
G K + + G+ L V +SQ+ ANQR GRAGRT PG+CYRLY++S F L N
Sbjct: 776 GFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTV 835
Query: 501 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 560
PEI R +L +L + A+GI D+ FDF+D P + A+ L L ++ + G +LT
Sbjct: 836 PEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLD-DEG--KLT 892
Query: 561 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 620
GK + ++P L + +LS + E +V M + ++F R D +++AD
Sbjct: 893 NLGKEMSLFPMDPTLSRSLLSSVDNQCSDE-IVTIISMLSVQNVFYR--PKDRQLEADSK 949
Query: 621 KVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 680
K +F H GD TLL+VY W E ++C N ++ + L+R +D ++ +
Sbjct: 950 KAKFHHPYGDHLTLLNVYTRWQQANYSE--QYCKTNFLHFRHLKRARD--------VKSQ 999
Query: 681 LAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPS 740
+++I L +++ D +++ +S N A Q+GY+ G V +HPS
Sbjct: 1000 ISMIFKKIGLKLISCHSDPD-LIRKTFVSGFFMNAAKRDS--QVGYKTINGGTEVGIHPS 1056
Query: 741 CSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFDVSMMERKKLHV 798
SL +G++ +V++ ++ + +Y+ VT+ + L + P D RKK
Sbjct: 1057 SSL--YGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKK--A 1112
Query: 799 RVITGFGSILLKKFCGKSNSNVLSLVSRLR 828
++I L KF NS LS + + R
Sbjct: 1113 KIIP-----LHNKFAKDQNSWRLSSIRQSR 1137
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 347 bits (890), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 343/638 (53%), Gaps = 49/638 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
LP + R+ +L I Q+L+++GETG GK+TQL QFL + G I CTQPR++AA+
Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAM 551
Query: 212 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 271
S+A+RV EE G +V F D+ + YMTD LL+ + +L + S II
Sbjct: 552 SVAKRVSEE-MGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVII 610
Query: 272 VDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 331
+DEAHERSLNTD+L+ L+K +L RR D++L++ SAT ++ + S +F + GR +P
Sbjct: 611 MDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYP 670
Query: 332 VDVRYV--PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 387
VD+ + PC+ YV VR V ++H ++ G IL F+T + ++E CE
Sbjct: 671 VDIMFAKAPCS--------DYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIAD 722
Query: 388 ------DAPSAVALPFHGQLSFDEQFCVFKSY-PGRRKVIFATNVAETSLTIPGVKFVID 440
DAP LP + Q+ D Q +F S PG RKV+ ATN+AETSLT+ G+ +V+D
Sbjct: 723 RLNQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVD 782
Query: 441 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYS-----KSDFETR 495
+G K + G++ L+V +SQ++ANQRAGRAGRT PG YRLY+ + FET
Sbjct: 783 TGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFET- 841
Query: 496 PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNG 555
PEI R +L VL + +LG+ ++ FDF+D P + ++ L LGA+ +
Sbjct: 842 ---TLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGAL---DN 895
Query: 556 VFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKI 615
+LT GK + ++P L KLI+ + E + + + M + S+F R E
Sbjct: 896 FGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVS-MLSVPSVFYRPKERAE-- 952
Query: 616 KADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELET 675
++D + +F D LL++Y+ W N WC ++ +++K+L+R +D ++L
Sbjct: 953 ESDAAREKFNVPESDHLMLLNIYQHWQR--NGYSNSWCSKHFLHSKTLKRARDIRQQLVE 1010
Query: 676 CLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHV 735
+ K+ I + S W+ ++ ++ SA A G + Y +G
Sbjct: 1011 IMSKQ-KISLESVSDWD---------IVRRVLCSAYFHQAACAKGIGE--YVHLRSGMPC 1058
Query: 736 QLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFD 773
LH + SL G P +V++ EL+ + +Y+ VT+ D
Sbjct: 1059 HLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVD 1096
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/644 (32%), Positives = 340/644 (52%), Gaps = 39/644 (6%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAA 210
LPI+ + ++I +++V++GETG GKSTQ+ QFL + A E + TQPR++AA
Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAA 154
Query: 211 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 270
++LA+RV E +GC + V F +++ Y+TD LL+ +ND LS+ +
Sbjct: 155 VNLAKRVAAE-QGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTL 213
Query: 271 IVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 330
I+DEAHER+L TD+LL VK ++ +R LR++IMSAT +A + S++F I ++ GR +
Sbjct: 214 ILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQY 273
Query: 331 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--- 387
PV + Y + Y+ +R + ++HT G IL FLT + E+E A E
Sbjct: 274 PVQIHYT------YTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIE-ALEALIKS 326
Query: 388 -------DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVI 439
+ P A P L ++Q VF + RKV+ +TN+AETS+TI G+++VI
Sbjct: 327 YSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVI 386
Query: 440 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 499
D+G+ K F G+ L V +SQS+A QR+GRAGR G+CYR+Y+++DF+ P
Sbjct: 387 DTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKET 446
Query: 500 EPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFEL 559
PEI R+ L AVL + A G DV F ++D PS + + A+ +L +GA+ N + +L
Sbjct: 447 IPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDL 506
Query: 560 TEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADC 619
G + + + P L + +L+ E + + + ++ S DE I+A
Sbjct: 507 ---GYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEA-- 561
Query: 620 LKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLE 678
+++F H GDL T L+ R++ + R +WC +N +N ++L+ D K+L E CL+
Sbjct: 562 -RLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLK 620
Query: 679 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 738
W N + L LS N A+ + Y + Q + +H
Sbjct: 621 DG--------WELNSSPEVNSENLLLS-FLSGYITNTALL--HPDGSYRTIIGNQTISIH 669
Query: 739 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
PS SL FG+K +++ EL+ Y+ V++ + L+ + P
Sbjct: 670 PSSSL--FGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAP 711
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 333 bits (853), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 353/667 (52%), Gaps = 71/667 (10%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD--------SGIAAEQSIVCT 203
LP++ Y++ + + Q + L+GETG GK+TQ+ Q+ + + + CT
Sbjct: 76 LPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACT 135
Query: 204 QPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFD-----SKVIYMTDHCLLQHF 258
QPR++AA+S+A RV EE D V+ S + D + + Y TD LL+
Sbjct: 136 QPRRVAAMSVATRVAEEM------DVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREA 189
Query: 259 MNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFY 318
MN L + +I+DEAHER+L TD+L+ L+K+++ R D+++VIMSAT DA + +YF
Sbjct: 190 MNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFE 249
Query: 319 DCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSK 377
DC + V GR FPV++ + P +A Y+ +R V ++H E+ EG IL FLT +
Sbjct: 250 DCPLLSVPGRTFPVEIFFTP------NAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQ 303
Query: 378 MEVEWACEKF---------DAPSAVALPFHGQLSFDEQFCVFKSYPGR-------RKVIF 421
E+E AC++ DA + +P + L Q +F+ P RK +
Sbjct: 304 EEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVI 363
Query: 422 ATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPG 481
+TN+AETSLTI GV FVID G K+ + P + L VC +S++SA QRAGRAGRT+PG
Sbjct: 364 STNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPG 423
Query: 482 RCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 540
+C+RLY+++ + + +Q PEI R +LG VL++ LG D+ FDF+D P+ + + A
Sbjct: 424 KCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRA 483
Query: 541 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 600
+ L L AI N ELTE G + + ++P+L K++++ E L + A+++
Sbjct: 484 LELLNYLQAI---NDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSV 540
Query: 601 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 660
C V ++ + +AD K +F H +GD TLL+VY + +E +WC++N +N
Sbjct: 541 PQ---CWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ--NQEDPQWCYDNFINY 595
Query: 661 KSLRRCQDTIKELETCLEKELAIIIPSYWL---WNPHKYTEYDKWLKEIILSALAENVAM 717
++++ DT++ +L+ ++ Y L K +Y +++ +++ VA
Sbjct: 596 RTMKTA-DTVR-------TQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAH 647
Query: 718 F--SGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFD 775
SG+ Y Q V LHPS + KP W ++ E + ++ VT +
Sbjct: 648 LERSGH----YVTVKDNQLVNLHPST---VLDHKPEWALYNEFVLTTKNFIRTVTDVRPE 700
Query: 776 SLSTLCP 782
L + P
Sbjct: 701 WLLQIAP 707
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 332 bits (852), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 360/673 (53%), Gaps = 65/673 (9%)
Query: 146 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 202
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 203 TQPRKIAAISLAQRVREESRGCY--EDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 260
TQPR++AA+S+AQRV +E E I + SSA+ + + YMTD LL+ MN
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK---TILKYMTDGMLLREAMN 247
Query: 261 DRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDC 320
D L R II+DEAHER+L TD+L+ ++K+++ +R DL++++MSAT DA + YF +C
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 321 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHT-TEKEGTILAFLTSKME 379
+ + GR PV++ Y P Y+ +R V ++H E+EG +L FLT + E
Sbjct: 308 PLLTIPGRTHPVEIFYTP------EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEE 361
Query: 380 VEWACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFAT 423
++ AC++ D V +P + L +Q +F+ P + RKV+ +T
Sbjct: 362 IDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVST 421
Query: 424 NVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRC 483
N+AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C
Sbjct: 422 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKC 481
Query: 484 YRLYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIR 542
+RLY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+
Sbjct: 482 FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 541
Query: 543 NLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 602
L L A+ N +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 542 LLNYLAAL---NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ 598
Query: 603 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 662
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +S
Sbjct: 599 ---CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRS 653
Query: 663 LRRCQDTIKELETCLEKELAIIIPSYWLWN-PHKYTEY---DKWLKEIILSALAENVAM- 717
L + ++L +++ +N P + T++ D ++ I AL M
Sbjct: 654 LMSADNVRQQLSRIMDR-----------FNLPRRSTDFTSRDYYIN--IRKALVTGYFMQ 700
Query: 718 FSGYDQLG-YEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 776
+ ++ G Y Q VQLHPS + KP WV++ E + Y+ T +
Sbjct: 701 VAHLERTGHYLTVKDNQVVQLHPST---VLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW 757
Query: 777 LSTLCPSPLFDVS 789
L + P +D+S
Sbjct: 758 LVKIAPQ-YYDMS 769
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 332 bits (852), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 360/673 (53%), Gaps = 65/673 (9%)
Query: 146 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 202
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 203 TQPRKIAAISLAQRVREESRGCY--EDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 260
TQPR++AA+S+AQRV +E E I + SSA+ + + YMTD LL+ MN
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK---TILKYMTDGMLLREAMN 247
Query: 261 DRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDC 320
D L R II+DEAHER+L TD+L+ ++K+++ +R DL++++MSAT DA + YF +C
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 321 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHT-TEKEGTILAFLTSKME 379
+ + GR PV++ Y P Y+ +R V ++H E+EG +L FLT + E
Sbjct: 308 PLLTIPGRTHPVEIFYTP------EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEE 361
Query: 380 VEWACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFAT 423
++ AC++ D V +P + L +Q +F+ P + RKV+ +T
Sbjct: 362 IDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVST 421
Query: 424 NVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRC 483
N+AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C
Sbjct: 422 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKC 481
Query: 484 YRLYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIR 542
+RLY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+
Sbjct: 482 FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 541
Query: 543 NLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 602
L L A+ N +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 542 LLNYLAAL---NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ 598
Query: 603 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 662
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +S
Sbjct: 599 ---CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRS 653
Query: 663 LRRCQDTIKELETCLEKELAIIIPSYWLWN-PHKYTEY---DKWLKEIILSALAENVAM- 717
L + ++L +++ +N P + T++ D ++ I AL M
Sbjct: 654 LMSADNVRQQLSRIMDR-----------FNLPRRSTDFTSRDYYIN--IRKALVTGYFMQ 700
Query: 718 FSGYDQLG-YEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 776
+ ++ G Y Q VQLHPS + KP WV++ E + Y+ T +
Sbjct: 701 VAHLERTGHYLTVKDNQVVQLHPST---VLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW 757
Query: 777 LSTLCPSPLFDVS 789
L + P +D+S
Sbjct: 758 LVKIAPQ-YYDMS 769
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 332 bits (851), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 360/673 (53%), Gaps = 65/673 (9%)
Query: 146 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 202
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 203 TQPRKIAAISLAQRVREESRGCY--EDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 260
TQPR++AA+S+AQRV +E E I + SSA+ + + YMTD LL+ MN
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK---TILKYMTDGMLLREAMN 247
Query: 261 DRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDC 320
D L R II+DEAHER+L TD+L+ ++K+++ +R DL++++MSAT DA + YF +C
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 321 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHT-TEKEGTILAFLTSKME 379
+ + GR PV++ Y P Y+ +R V ++H E+EG +L FLT + E
Sbjct: 308 PLLTIPGRTHPVEIFYTP------EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEE 361
Query: 380 VEWACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFAT 423
++ AC++ D V +P + L +Q +F+ P + RKV+ +T
Sbjct: 362 IDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVST 421
Query: 424 NVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRC 483
N+AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C
Sbjct: 422 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKC 481
Query: 484 YRLYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIR 542
+RLY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+
Sbjct: 482 FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 541
Query: 543 NLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 602
L L A+ N +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 542 LLNYLAAL---NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ 598
Query: 603 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 662
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +S
Sbjct: 599 ---CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRS 653
Query: 663 LRRCQDTIKELETCLEKELAIIIPSYWLWN-PHKYTEY---DKWLKEIILSALAENVAM- 717
L + ++L +++ +N P + T++ D ++ I AL M
Sbjct: 654 LMSADNVRQQLSRIMDR-----------FNLPRRSTDFTSRDYYIN--IRKALVTGYFMQ 700
Query: 718 FSGYDQLG-YEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 776
+ ++ G Y Q VQLHPS + KP WV++ E + Y+ T +
Sbjct: 701 VAHLERTGHYLTVKDNQVVQLHPST---VLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW 757
Query: 777 LSTLCPSPLFDVS 789
L + P +D+S
Sbjct: 758 LVKIAPQ-YYDMS 769
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 227/656 (34%), Positives = 341/656 (51%), Gaps = 52/656 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 210
LP++ R IL I Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 211 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 270
+++A RV EE + C +++ ++TD L++ M D L++ S I
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVI 173
Query: 271 IVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYD----------C 320
++DEAHER+L TD+ + L+K + +R DLRL++ SAT DA + +F C
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTC 233
Query: 321 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEV 380
I V GR FPVD+ Y+ S V Y+ V V ++H TE +G +LAFLT + EV
Sbjct: 234 VILTVEGRTFPVDIFYL------QSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEV 287
Query: 381 EWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAET 428
E + A+A LP + L EQ VF+ RKVI ATNVAET
Sbjct: 288 ETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAET 347
Query: 429 SLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYS 488
S+TI G+ +VID G VK + P T + L V VSQ+SANQRAGR GR+ G+CYRLY+
Sbjct: 348 SITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYT 407
Query: 489 KSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLG 548
+ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A+ L LG
Sbjct: 408 EEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALG 467
Query: 549 AIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCR 607
+ + LTE G + + + P K++L +E L +AA+M +IF
Sbjct: 468 GLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM-QIQNIF-- 521
Query: 608 VGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQ 667
V ++K A + +F GD T+L++Y + + + +KWC E+ +N K L R
Sbjct: 522 VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF--IKHNKDSKWCQEHFLNYKGLVRAA 579
Query: 668 DTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLK-EIILSALAENVAMFSGYDQLGY 726
++L+ L K P K +E D L I+S N A F + Y
Sbjct: 580 TVREQLKKLLVK----------FQVPRKSSEGDPDLVLRCIVSGFFANAARF--HSTGAY 627
Query: 727 EVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
+ +HP+ S+L + P WV++ E++ + Y+ VTA + L L P
Sbjct: 628 RTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAP 682
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 227/656 (34%), Positives = 342/656 (52%), Gaps = 52/656 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 210
LP++ R IL I Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 211 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 270
+++A RV EE + C +++ ++TD L++ M D L++ S I
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVI 173
Query: 271 IVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYD----------C 320
++DEAHER+L TD+ + L+K + +R DLRL++ SAT DA + +F C
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTC 233
Query: 321 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEV 380
I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + EV
Sbjct: 234 VILTVGGRTFPVDIFYL------QSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEV 287
Query: 381 EWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAET 428
E + A+A LP + L EQ VF+ RKVI ATNVAET
Sbjct: 288 ETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAET 347
Query: 429 SLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYS 488
S+TI G+ +VID G VK + P T + L V VSQ+SANQRAGR GR+ G+CYRLY+
Sbjct: 348 SITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYT 407
Query: 489 KSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLG 548
+ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A+ L LG
Sbjct: 408 EEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALG 467
Query: 549 AIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCR 607
+ + LTE G + + + P K++L +E L +AA+M +IF
Sbjct: 468 GLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM-QIQNIF-- 521
Query: 608 VGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQ 667
V ++K +A + +F GD T+L+VY + + + ++WC E+ +N K L R
Sbjct: 522 VVPPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQEHFLNYKGLVRAA 579
Query: 668 DTIKELETCLEKELAIIIPSYWLWNPHKYTEYDK-WLKEIILSALAENVAMFSGYDQLGY 726
++L+ L K P K +E D + I+S N A F + Y
Sbjct: 580 TVREQLKKLLVK----------FQVPKKSSEGDPDPVLRCIVSGFFANAARF--HSTGAY 627
Query: 727 EVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
+ +HP+ S+L + P WV++ E++ + Y+ VTA + L L P
Sbjct: 628 RTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAP 682
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 330 bits (845), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 337/652 (51%), Gaps = 49/652 (7%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAA 210
LPI+ R +L ++ VLIGETG GK+TQ+ Q+L + GI+ + I TQPR++AA
Sbjct: 64 SLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 123
Query: 211 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
ISLA RV +E R E ++ Y F D+++ ++TD LL+ ++D L + SC
Sbjct: 124 ISLATRVSDEKRT--ELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSC 181
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRR-----FDLRLVIMSATADAHQLSKYFYDCGISH 324
+I+DEAHER+++TD+L +VK RR L++++MSAT D S+YF + +
Sbjct: 182 VILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLY 241
Query: 325 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEW- 382
+ GR P+ + Y Y+ + V ++H IL FLT + E+E
Sbjct: 242 LEGRQHPIQIFYT------KQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAM 295
Query: 383 --ACEKF------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIP 433
C PS + LP + L + +Q VF+ P G RKVI +TN+AETS+TI
Sbjct: 296 SKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITIT 355
Query: 434 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 493
G+K+V+D+GMVK + P +G+ VL V RVS++ A QR GRAGR + G CYRLY++ +FE
Sbjct: 356 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 415
Query: 494 TRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLN 553
PEI R +L +L++LA+ + +V FDF+ PS IE AI L LGA++
Sbjct: 416 KFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHK 475
Query: 554 NGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDE 613
+ LT G+ + +EPR K IL + E L + ++++ S ++ DE
Sbjct: 476 DDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDE 535
Query: 614 KIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 673
++ +F GD TLL++YR + ++ WC EN VN+K++ + +L
Sbjct: 536 ---VQSVRKKFISSEGDHITLLNIYRTFKNI--GGNKDWCKENFVNSKNMLLVAEVRAQL 590
Query: 674 -ETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQL--GYEVAM 730
E CL+ + I+ + E + +A ++ M + Q Y
Sbjct: 591 REICLKMSMPIM--------------SSRGDMESVRRCMAHSLFMNTAELQTDGTYATTD 636
Query: 731 TGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 782
T Q V +HPS ++F KP VV+ LL N Y+ + D + L P
Sbjct: 637 THQPVAIHPSS--VLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAP 686
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 328 bits (840), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 348/657 (52%), Gaps = 54/657 (8%)
Query: 144 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE--QSIV 201
+ K ++ LP++ R +L I Q++V+IGETG GK+TQL Q+L + G A + +SIV
Sbjct: 342 DIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIV 401
Query: 202 CTQPRKIAAISLAQRVREESRGCY--EDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFM 259
TQPR++AAIS+A+RV E + E I + + ++ +K+ ++TD LL+ +
Sbjct: 402 VTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSEC--TKLKFVTDGILLRETL 459
Query: 260 NDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYD 319
D L + SC+I+DEAHERSLNTD+LL K LL RR DL+L+I SAT +A + S +F +
Sbjct: 460 LDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGN 519
Query: 320 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTE--KEGTILAFLTSK 377
+ GR FPV Y ++ V YV V ++H G IL F+T +
Sbjct: 520 APQFTIPGRTFPVQTIYT------SNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQ 573
Query: 378 MEVE-----------------WACEKFDAPSAVA-LPFHGQLSFDEQFCVFKSYPG-RRK 418
++E + F+ + + LP + L D QF +F+ G +RK
Sbjct: 574 EDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRK 633
Query: 419 VIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRT 478
+I ATN+AETSLTI G+++VID G K + P G++ L + +S+++A+QR+GRAGRT
Sbjct: 634 IIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRT 693
Query: 479 EPGRCYRLYSKSDF-ETRPLNQEPEIHRVHLGIAVLRILALGIRD-VQGFDFIDAPSAKA 536
PG YRLY++ F E L PEI R +L +L + +L + D + F FID P +
Sbjct: 694 APGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQT 753
Query: 537 IEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAA 596
++ L +GAI + +LT G + K ++P L K++L R E L + +
Sbjct: 754 FLSSLYELWFIGAIDTSG---QLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVS 810
Query: 597 VMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWEN 656
M + +F R + + +AD + +F D TLL+V+ +W + + WC ++
Sbjct: 811 -MLSVPQVFYR--PKERQKEADIARNKFFIAKSDHLTLLNVFEQWRA--NNFSSHWCNKH 865
Query: 657 SVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVA 716
V KSL R +D +L T L+ + +I S W+ +K+ I S A A
Sbjct: 866 FVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWD---------IIKKCICSGFAHQAA 916
Query: 717 MFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFD 773
+G Y TG VQLHP+ +L G P +VV+ ELL + +Y+ CVT+ D
Sbjct: 917 KITGLR--NYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVD 971
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 216/639 (33%), Positives = 337/639 (52%), Gaps = 40/639 (6%)
Query: 141 IVRECKRLE----DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA 196
++RE R E D LP+ +QDIL I Q++++ GETG GK+TQL + + G
Sbjct: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121
Query: 197 EQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLL 255
+ I TQPR++AA ++A R+ EE + E I Y FS ++ V MTD LL
Sbjct: 122 KGLIGHTQPRRLAARTVANRIAEELKT--EPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179
Query: 256 QHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSK 315
DR L + II+DEAHERSLN D LL +K+LL RR DL+++I SAT D + S+
Sbjct: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239
Query: 316 YFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLT 375
+F + I V GR +PV+VRY P + + V E+ + E G IL F++
Sbjct: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMS 298
Query: 376 SKMEVEW---ACEKFDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTI 432
+ E+ A K + LP + +LS EQ VF+S+ GRR ++ ATNVAETSLT+
Sbjct: 299 GEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRR-IVLATNVAETSLTV 357
Query: 433 PGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF 492
PG+K+VID G + S + T + L + +SQ+SANQR GR GR G C RLYS+ DF
Sbjct: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417
Query: 493 ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 552
+RP +PEI R +L +L++ ALG+ D+ F F++AP + I+ +R L +LGAI
Sbjct: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477
Query: 553 NN--GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGS 610
+ ++LT G+ L +L ++PRL +++L + RE +++ + ++ R
Sbjct: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP---RERP 534
Query: 611 DDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREER-------NKWCWENSVNAKSL 663
D++ +D +F + D +++ W+ L +++ + C + +N +
Sbjct: 535 MDKQQASDEKHRRFHDKESDFLAFVNL---WNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591
Query: 664 RRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQ 723
R QD +L + KEL I + S P +Y E + +L+ L ++ M D+
Sbjct: 592 REWQDIYTQLRQVV-KELGIPVNS----EPAEYRE----IHIALLTGLLSHIGMKDA-DK 641
Query: 724 LGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVN 762
Y A + + P L F + P WV+ EL+ +
Sbjct: 642 QEYTGARNAR-FSIFPGSGL--FKKPPKWVMVAELVETS 677
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 325 bits (834), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 217/641 (33%), Positives = 337/641 (52%), Gaps = 51/641 (7%)
Query: 151 GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAA 210
LPI+ R +L ++ VLIGETG GK+TQ+ Q+L + GI+ + I TQPR++AA
Sbjct: 73 SLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 132
Query: 211 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
ISLA RV +E R E ++ Y F D+++ ++TD LL+ ++D L + SC
Sbjct: 133 ISLATRVSDEKRT--ELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSC 190
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRR-----FDLRLVIMSATADAHQLSKYFYDCGISH 324
+I+DEAHER+++TD+L +VK RR L++++MSAT D S+YF + +
Sbjct: 191 VILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLY 250
Query: 325 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEW- 382
+ GR P+ V Y Y+ + V ++H IL FLT + E+E
Sbjct: 251 LEGRQHPIQVFYT------KQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAM 304
Query: 383 --ACEKF------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIP 433
C P+ + LP + L + +Q VF+ P G RKVI +TN+AETS+TI
Sbjct: 305 SKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITIT 364
Query: 434 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 493
G+K+V+D+GMVK + P +G+ VL V RVS++ A QR GRAGR + G CYRLY++ +FE
Sbjct: 365 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 424
Query: 494 TRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLN 553
PEI R +L +L++LA+ + +V FDF+ PS I+ AI L LGA++
Sbjct: 425 KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHK 484
Query: 554 NGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDE 613
+ LT G+ + +EP+ K IL + E L + ++++ S+ S E
Sbjct: 485 DDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLS-VDSVLHNPPSRRE 543
Query: 614 KIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 673
+++ ++ +F GD TLL++YR + +L WC EN VN+K++ + +L
Sbjct: 544 EVQG--VRKKFISSEGDHMTLLNIYRTFKNL--GGNKDWCKENFVNSKNMTLVAEVRAQL 599
Query: 674 -ETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQL--GYEVAM 730
+ CL+ + I + E + LA ++ M + Q Y
Sbjct: 600 RDICLKMSMPI--------------ASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTD 645
Query: 731 TGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYL--VCV 769
T Q V +HPS ++F KP VV+ ELL N Y+ +CV
Sbjct: 646 THQPVAIHPSS--VLFHCKPACVVYTELLYTNKCYMRDLCV 684
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 320 bits (819), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 205/671 (30%), Positives = 343/671 (51%), Gaps = 63/671 (9%)
Query: 129 CQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF 188
Q + + ++E ++L LP++ Y+ ++L+ I Q+L+++GETG GK+TQL Q+
Sbjct: 203 AQALETEEKRILTIQEARKL---LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQY 259
Query: 189 LADSGIA--AEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKV 246
L + G + I TQPR++AA S+A RV +E +V+ F+ K
Sbjct: 260 LVEDGFTDQGKLQIAITQPRRVAATSVAARVADEM-------NVVLGKEVGYQIRFEDKT 312
Query: 247 I-------YMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDL 299
YMTD LL+ F+ D LS+ SCI++DEAHER+L TD+L+ L+KD+L +R L
Sbjct: 313 TPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTL 372
Query: 300 RLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVG 359
+L+I SAT +A + S++F +C I +V GR +PVD+ Y A+Y+ + +
Sbjct: 373 KLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYT------LQPEANYIHAAITTIF 426
Query: 360 EVHTTEK-EGTILAFLTSKMEVEWACEKFD---------APSAVALPFHGQLSFDEQFCV 409
++HTT+ G IL FLT + E+E K + + P + L ++Q +
Sbjct: 427 QIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKI 486
Query: 410 FKSYPGR-RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSA 468
F+ P RKV+ ATN+AETSLTI G+++VID G VKE+ + P TGM L S++S
Sbjct: 487 FQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASV 546
Query: 469 NQRAGRAGRTEPGRCYRLYSK-SDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 527
+QRAGRAGR PG+C+R+++K S L +PEI R +L VL +L+LG+ D+ F
Sbjct: 547 DQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFP 606
Query: 528 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRR- 586
+D PS + ++ NL LGA+ N +T GK + + EP K++ +
Sbjct: 607 LMDKPSIPTLRKSLENLYILGAL---NSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQ 663
Query: 587 ---LGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDS 643
+ E L + +++ S+F +G K D D L ++ +W +
Sbjct: 664 CQGVLEECLTIVSMLHETPSLF--IGQ-----KRDAAASVLSEVESDHILYLEIFNQWRN 716
Query: 644 LPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEY-DKW 702
+ WC ++ + K++ R ++ +L C EK + Y +
Sbjct: 717 --SKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINAR 774
Query: 703 LKEIILSALAENVAMF--SGYDQLGYEVAMTGQHVQLHPSCSLLIF----GQKPT-WVVF 755
+ +S N+ +GY +G G +V +HP+ L + Q+P+ +V++
Sbjct: 775 ITRCFISGFPMNIVQLGPTGYQTMGRSSG--GLNVSVHPTSILFVNHKEKAQRPSKYVLY 832
Query: 756 GELLSVNNQYL 766
+L+ + +++
Sbjct: 833 QQLMLTSKEFI 843
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 314 bits (804), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 337/648 (52%), Gaps = 59/648 (9%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS------IVCTQP 205
LP+++ + D L + Q L+L+GETG GK+TQ+ QF+ D+ +A + CTQP
Sbjct: 65 LPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQP 124
Query: 206 RKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 264
R++AA+S+++RV +E ++ + Y F + + Y+TD LL+ M D L
Sbjct: 125 RRVAAMSVSRRVADEMDVSIGEE--VGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLL 182
Query: 265 SRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISH 324
R II+DEAHER+L TD+L L+K++L R DL+LV+MSAT +A + +YF +
Sbjct: 183 ERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 325 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 384
V GR PV++ Y Y+ +R V ++H E G IL FLT + E+E AC
Sbjct: 243 VPGRLHPVEIFYT------QEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC 296
Query: 385 EKFD----------APSAVALPFHGQLSFDEQFCVF--------KSYPGRRKVIFATNVA 426
K + P V +P + L Q +F + P RK++ +TN+A
Sbjct: 297 RKINKEVSNLGDQVGPVKV-VPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIA 355
Query: 427 ETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRL 486
ETSLTI G+ +VID G K+ + P + L V +S++SA+QR+GRAGRT PG+C+RL
Sbjct: 356 ETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRL 415
Query: 487 YSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLV 545
Y++ F Q PEI R +L VL + LGI D+ FDF+D P+ + + A+ L
Sbjct: 416 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLN 475
Query: 546 QLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIF 605
LGA+ + G LT+ G+ + + ++P++ K+++ E L ++A+++ +
Sbjct: 476 YLGALD-DEG--NLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN--- 529
Query: 606 CRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRR 665
C V + + AD K +F H +GD TLL+VY + E WC+EN VN ++++
Sbjct: 530 CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPNWCFENFVNNRAMKS 587
Query: 666 CQDTIKELETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMF--SGYD 722
+ ++L + + L + + +Y +++ +L+ VA +G+
Sbjct: 588 ADNVRQQLVRIMSRFNLKMCSTDF------NSRDYYVNIRKAMLAGYFMQVAHLERTGH- 640
Query: 723 QLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVT 770
Y Q V LHPS L KP WV++ E + ++ VT
Sbjct: 641 ---YLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTTRNFIRTVT 682
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 303 bits (776), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 322/639 (50%), Gaps = 64/639 (10%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 210
LPI+ R IL + ++++GETGCGKSTQ+ QFL ++G AA+ + IV TQPR++A
Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136
Query: 211 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 270
++LA RV EE + C V F D+KV +MTD LL+ + D LS+ S I
Sbjct: 137 VTLATRVAEE-KDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSII 195
Query: 271 IVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFY----------DC 320
++DEAHERS NTD+LL L++ ++ R DLR+++ SAT DA +F
Sbjct: 196 MIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTA 255
Query: 321 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEV 380
GI V GR PV V + ++V Y V V +H E G IL FLT + EV
Sbjct: 256 GIISVEGRTHPVAVHHT------KTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 381 EWACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLT 431
E CEK + +P +G L EQ F S P G RKV+ ATN+AE S+T
Sbjct: 310 EDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASIT 369
Query: 432 IPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSD 491
IPG+ +VID+G VK G+ L VS++SA QRAGRAGR PG+CYRLY +S+
Sbjct: 370 IPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESE 429
Query: 492 FETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 551
FE PEI R + +L++ ALG+++V F ++ P + A+ + L LGAI
Sbjct: 430 FERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAID 489
Query: 552 LNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGS 610
+ +LT G + + + P K +L E + + A+M +F +
Sbjct: 490 ETS---QLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMM-QIQDVF--ITP 543
Query: 611 DDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTI 670
++ +AD ++ +F GD T+L+V+ ++ R + KWC ++ VN + L R +
Sbjct: 544 YRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSK--KWCSDHFVNYRGLMRADNVR 601
Query: 671 KELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENV--AMFSGYDQLGYEV 728
+L L++ + S L N +EN+ + +G+ +
Sbjct: 602 SQLVRLLKRFEIEKVSSRGLIN------------------CSENIRQCLVTGFFSQAAQY 643
Query: 729 AMTGQHV--------QLHPSCSLLIFGQKPTWVVFGELL 759
TG+++ ++ S++ P WV+F E++
Sbjct: 644 HYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM 682
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 300 bits (768), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 333/628 (53%), Gaps = 40/628 (6%)
Query: 150 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 209
+ LP+ + +I + I Q++V+ GETG GK+TQL + + G I TQPR+IA
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIA 140
Query: 210 AISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 268
A S+A R+ EE E ++ Y F+ ++++ MTD LL NDR L++ S
Sbjct: 141 ARSVAARIAEELET--ELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYS 198
Query: 269 CIIVDEAHERSLNTDLLLALVKDLLCRRF-DLRLVIMSATADAHQLSKYFYDCGISHVVG 327
C+I+DEAHERSLN D +L +K LL RR DL+L+I SAT D + SK+F + I V G
Sbjct: 199 CLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSG 258
Query: 328 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE---WAC 384
R +PV+VRY P + ++ V E+ E G IL F+ + E+ A
Sbjct: 259 RTYPVEVRYRPVVEEDDQ---DQLQGILNAVDELQA-EGRGDILIFMNGEREIRDTAEAL 314
Query: 385 EKFDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMV 444
+K + LP +LS EQ +F G +++ ATNVAETSLT+P +K+VID G
Sbjct: 315 QKQNLKHTEILPLFARLSAQEQNKIFHP-SGLNRIVLATNVAETSLTVPSIKYVIDPGTA 373
Query: 445 KESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIH 504
+ S + T + L + +SQ+SANQR GR GR G C RLYS+ DF +RP +PEI
Sbjct: 374 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPEFTDPEIL 433
Query: 505 RVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGA---IKLNNGVFE-LT 560
R +L +L++ ALG+ D++ F F+DAP + I+ ++ L +LGA ++ +G LT
Sbjct: 434 RTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRLLT 493
Query: 561 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 620
G+ L +L ++PRL K+ILS E +++ + ++ R +++ +D
Sbjct: 494 RVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDP---RERPQEKQQASDEK 550
Query: 621 KVQFCHRNGDLFTLLSVYREWDSLPRE-ERNKW---CWENSVNAKSLRRCQDTIKELETC 676
+F + D L+++R +E +N++ C ++ +N +R QD ++
Sbjct: 551 HRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREWQDIYHQIRLT 610
Query: 677 LEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQ--LGYEVAMTGQH 734
+ +E+++ I S + EY + + +LS L ++ + Q LG A H
Sbjct: 611 V-REMSLPINS-------EKAEYQQ-IHTALLSGLLSHIGLKEAEKQQYLGARNA----H 657
Query: 735 VQLHPSCSLLIFGQKPTWVVFGELLSVN 762
+ P+ ++F ++P WV+ EL+ +
Sbjct: 658 FAIFPNS--VLFKKQPKWVMAAELVETS 683
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 296 bits (757), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 303/577 (52%), Gaps = 33/577 (5%)
Query: 121 VDVFRFEDCQRFDWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 179
V FR D+ + QAF + + +R LPI Y IL+ + Q++V+ G+TGC
Sbjct: 132 VSEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGC 191
Query: 180 GKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSS 238
GKSTQ+ Q+L +G + + CTQPR+IA ISLA+RV ES Y S + Y F S
Sbjct: 192 GKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGFESLSQY--GSQVGYQIRFES 246
Query: 239 AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFD 298
+ +K++++T LL+ + L + +IVDE HER L+ D LL +++ LL +R D
Sbjct: 247 TRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPD 306
Query: 299 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD----- 353
L++++MSAT + S YF + V GR FP+ V Y P T++ + +
Sbjct: 307 LKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLR 366
Query: 354 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFC 408
V+ + + E+ G +L FL+ E+ + A ++ V LP H LS +Q
Sbjct: 367 VLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQAYASLTQRWVVLPLHSALSVSDQDK 426
Query: 409 VFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 467
VF P G RK I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+S
Sbjct: 427 VFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 486
Query: 468 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 527
A QR GRAGRT PG CYRLY++SD++ PEI RV L VL++ ++ + D + F
Sbjct: 487 AEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFP 546
Query: 528 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 587
FI+ P ++E AI L + GA+ + LT G L +L ++ +GK+++ L
Sbjct: 547 FIEPPPPASVETAILYLQEQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFSL 603
Query: 588 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQ--FCHRNGDLFTLLSVYREWDSLP 645
L +AA + + S F R + DC + GD FTL +V+ W +
Sbjct: 604 AEPVLTIAAAL-SVQSPFTRSAQSN----LDCATARRPLESDQGDPFTLFNVFNAWVQV- 657
Query: 646 REERN----KWCWENSVNAKSLRRCQDTIKELETCLE 678
+ ER+ KWC V L + ++ + LE
Sbjct: 658 KSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 694
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 293 bits (749), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 301/574 (52%), Gaps = 27/574 (4%)
Query: 121 VDVFRFEDCQRFDWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 179
V FR D+ + QAF + + +R LPI Y IL+ + Q++V+ G+TGC
Sbjct: 130 VAEFRRALLHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGC 189
Query: 180 GKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSS 238
GKSTQ+ Q+L +G + + CTQPR+IA ISLA+RV ES Y S + Y F S
Sbjct: 190 GKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGFESLSQY--GSQVGYQIRFES 244
Query: 239 AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFD 298
+ +K++++T LL+ + L + +IVDE HER L+ D LL +++ LL R D
Sbjct: 245 TRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPD 304
Query: 299 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD----- 353
L++++MSAT + S YF + + V GR FP+ V Y P T++ + +
Sbjct: 305 LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR 364
Query: 354 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFC 408
V+ + + E+ G +L FL+ E+ E ++ V LP H LS +Q
Sbjct: 365 VLESIDHKYPPEERGDLLVFLSGMAEISAVLEAAQTYASHTQRWVVLPLHSALSVADQDK 424
Query: 409 VFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 467
VF + PG RK I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+S
Sbjct: 425 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 484
Query: 468 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 527
A QR GRAGRT PG C+RLY++SD++ PEI RV L VL++ ++ + D + F
Sbjct: 485 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP 544
Query: 528 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 587
FI+ P ++E AI L GA+ + LT G L +L ++ +GK+++ L
Sbjct: 545 FIEPPPPASLETAILYLRDQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFSL 601
Query: 588 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE 647
L +AA + + S F R + A ++ GD FTL +V+ W + E
Sbjct: 602 VEPVLTIAAAL-SVQSPFTRSAQSSPECAAARRPLE--SDQGDPFTLFNVFNAWVQVKSE 658
Query: 648 -ERN--KWCWENSVNAKSLRRCQDTIKELETCLE 678
RN KWC + L + ++ + LE
Sbjct: 659 RSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLE 692
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 335/662 (50%), Gaps = 48/662 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
PI R+ I++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAI
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 212 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 271
S+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II
Sbjct: 113 SVAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 272 VDEAHERSLNTDLLLALVKDLL-----CRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 326
+DEAHER+L TD+L L+K L R+ L++V+MSAT + +LS +F +C I +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 327 GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE- 385
GR +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 386 ----------KFDAPSA-----VALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETS 429
+D + LP +G ++ D+Q +F PG RK + +TN++ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 430 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 489
LTI G+++V+D G VK+ P G+++L V +S+S A QR+GRAGRT G+C+R+YSK
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 490 SDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQL 547
DF + P + PEI R L VL + L I DV F ++D P+ + I A++ L Q
Sbjct: 412 -DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 548 GAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLA-AVMANASSIFC 606
AI + V L G +V+ + P L ++ L E L+L A M + ++F
Sbjct: 471 DAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCEDLLLPIAAMLSVENVFI 525
Query: 607 RVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPREERNKWCWENSVNAKSL 663
R + + +A+ + + G D TL ++ + S WC ++ ++ + L
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS--SGAPASWCQKHWIHWRCL 583
Query: 664 ---RRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 720
R + ++EL L+++ P P + L+ + + +NVA S
Sbjct: 584 FSAFRVEAQLRELIRKLKQQSD--FPKETFEGPKH-----EVLRRCLCAGYFKNVARRS- 635
Query: 721 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 780
+ + G V +HPS +L K W++F E+L Y V ++ + L
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 781 CP 782
P
Sbjct: 696 LP 697
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 208/662 (31%), Positives = 335/662 (50%), Gaps = 48/662 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
PI R+ I++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAI
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 212 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 271
S+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II
Sbjct: 113 SVAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 272 VDEAHERSLNTDLLLALVKDLL-----CRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 326
+DEAHER+L TD+L L+K L R+ L++V+MSAT + +LS +F +C I +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 327 GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE- 385
GR +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 386 ----------KFDAPSA-----VALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETS 429
+D + LP +G ++ D+Q +F PG RK + +TN++ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 430 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 489
LTI G+++V+D G VK+ P G+++L V +S+S A QR+GRAGRT G+C+R+YSK
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 490 SDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQL 547
DF + P + PEI R L VL + L I DV F ++D P+ + I A++ L Q
Sbjct: 412 -DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 548 GAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLA-AVMANASSIFC 606
AI + V L G +V+ + P L ++ L E L+L A M + ++F
Sbjct: 471 DAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCEDLLLPIAAMLSVENVFI 525
Query: 607 RVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPREERNKWCWENSVNAKSL 663
R + + +A+ + + G D TL ++ + S WC ++ ++ + L
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS--SGAPASWCQKHWIHWRCL 583
Query: 664 ---RRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 720
R + ++EL L+++ P P + L+ + + +NVA S
Sbjct: 584 FSAFRVEAQLRELIRKLKQQSD--FPRETFEGPKH-----EVLRRCLCAGYFKNVARRS- 635
Query: 721 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 780
+ + G V +HPS +L K W+VF E+L Y V ++ + L
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIVFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 781 CP 782
P
Sbjct: 696 LP 697
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 211/680 (31%), Positives = 346/680 (50%), Gaps = 52/680 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAI
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 212 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 271
S+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II
Sbjct: 113 SVAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 272 VDEAHERSLNTDLLLALVKDLL-----CRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 326
+DEAHER+L TD+L L+K L R+ L++V+MSAT + +LS +F +C I +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 327 GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE- 385
GR +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 386 ----------KFDAPSA-----VALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETS 429
+D + LP +G ++ D+Q +F PG RK + +TN++ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 430 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 489
LTI G+++V+D G VK+ P G+++L V +S+S A QR+GRAGRT G+C+R+YSK
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 490 SDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQL 547
DF + P + PEI R L VL + L I DV F ++D P+ + I A++ L Q
Sbjct: 412 -DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 548 GAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLA-AVMANASSIFC 606
AI + V L G +V+ + P L ++ L E L+L A M + ++F
Sbjct: 471 DAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIRA--ASLDCEDLLLPIAAMLSVENVFI 525
Query: 607 RVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPREERNKWCWENSVNAKSL 663
R + + +A+ + + G D TL ++ + S WC ++ ++ + L
Sbjct: 526 RPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKS--SGAPASWCQKHWIHWRCL 583
Query: 664 ---RRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 720
R + ++EL L+++ P P + L+ + + +NVA S
Sbjct: 584 FSAFRVEAQLRELIRKLKQQSD--FPRETFEGPKH-----EVLRRCLCAGYFKNVARRS- 635
Query: 721 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQY--LVCVTAFDF--DS 776
+ + G V +HPS +L K W++F E+L Y +VC +++ D
Sbjct: 636 VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 695
Query: 777 LSTLCPSPLFDVSMMERKKL 796
L L D+S + R+++
Sbjct: 696 LPKLHELNAHDLSSVARREM 715
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 290 bits (741), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 345/679 (50%), Gaps = 50/679 (7%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 211
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAI
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 212 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 271
S+AQRV EE + C V F ++ + YMTD CLL+H + D +LS+ S II
Sbjct: 113 SVAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 272 VDEAHERSLNTDLLLALVKDLL-----CRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 326
+DEAHER+L TD+L L+K L R+ L++V+MSAT + +LS +F +C I +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 327 GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE- 385
GR +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 386 ----------KFDAPSA-----VALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETS 429
+D + LP +G ++ D+Q +F PG RK + +TN++ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 430 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 489
LTI G+++V+D G VK+ P G+++L V +S+S A QR+GRAGRT G+C+R+YSK
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 490 SDF-ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLG 548
+ + P + PEI R L VL + L I DV F ++D P+ + I A++ L Q
Sbjct: 412 EFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 549 AIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLA-AVMANASSIFCR 607
AI + V L G +V+ + P L ++ L E L+L A M + ++F R
Sbjct: 472 AIDRSGHVTRL---GLSMVEFPLPPHLTCAVIRA--ASLDCEDLLLPIAAMLSVENVFIR 526
Query: 608 VGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPREERNKWCWENSVNAKSL- 663
+ + +A+ + + G D TL ++ + S WC ++ ++ + L
Sbjct: 527 PVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS--SGAPASWCQKHWIHWRCLF 584
Query: 664 --RRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY 721
R + ++EL L+++ P P + L+ + + +NVA S
Sbjct: 585 SAFRVEAQLRELIRKLKQQSD--FPRETFEGPKH-----EVLRRCLCAGYFKNVARRS-V 636
Query: 722 DQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQY--LVCVTAFDF--DSL 777
+ + G V +HPS +L K W++F E+L Y +VC +++ D L
Sbjct: 637 GRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLL 696
Query: 778 STLCPSPLFDVSMMERKKL 796
L D+S + R+++
Sbjct: 697 PKLHELNAHDLSSVARREM 715
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 273 bits (699), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 207/644 (32%), Positives = 322/644 (50%), Gaps = 68/644 (10%)
Query: 152 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 210
LPI YR +L + QI +++G TGCGK+TQ+ QFL ++G A++ I+ CTQPR++ A
Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84
Query: 211 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 269
S+++RV E S+ Y F +K+ YMTD LL D L R S
Sbjct: 85 KSVSERVSLELNS--PPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSI 142
Query: 270 IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYD---CGISHVV 326
+I+DE HER+L+TDLLL ++K +L +R D RLV+ SA+ DA++LS++F C +S +
Sbjct: 143 VILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMS-IE 201
Query: 327 GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 386
G+ FPV+ ++ T +YV + V +++T G IL FL+ + E+E+ +K
Sbjct: 202 GKLFPVETLFLQKPTE------NYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKK 255
Query: 387 F---------DAPSAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTIPGVK 436
D + V LP H L+ DEQ VF Y G RKVIF+TN+AETS+TI G+
Sbjct: 256 IEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIV 315
Query: 437 FVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRP 496
+V+DSG K+ + P T + L +S+SSA QR+GRAGRT G+ +RLY++ +
Sbjct: 316 YVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMK 375
Query: 497 LNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGV 556
E +I + VL + LG++++ F F P + A+ +L LG
Sbjct: 376 EEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGV------- 428
Query: 557 FELTEEGKFLVKLGIE-------PRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVG 609
L E G LGI+ + K +L+ + E L +A+++ A +F
Sbjct: 429 --LDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILT-AGEVFYNPT 485
Query: 610 SDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDT 669
S K A F GD+ T L+V+ + + ++ +WC +N +N ++LR+ D
Sbjct: 486 S-SSKNDAFVAHSSFFANEGDIITALNVFESF--VGNKKDLQWCRKNYLNYQTLRQALDI 542
Query: 670 IKELETCLEK---ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG---YDQ 723
L L K A +PS ++ K LK +L NVA Y
Sbjct: 543 RTHLVRFLNKFSIPTAQRLPS---------SDCSKILK-CLLDGFVRNVAHLQNDGSYKT 592
Query: 724 LGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLV 767
+G G+ V L S ++ +K W+++ + Q V
Sbjct: 593 IG------GKQVWLDSSS--VLHEKKTPWIMYSSAVESETQIFV 628
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 273 bits (698), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 331/660 (50%), Gaps = 48/660 (7%)
Query: 147 RLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ--SIVCTQ 204
++ + LP+Y ++++I+ I + VLIGETG GKSTQ+ QF+ + ++ SI TQ
Sbjct: 76 KMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQ 135
Query: 205 PRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 264
PR++AAI+LA RV +E GC + V F + +++ Y+TD LL+ M + DL
Sbjct: 136 PRRVAAINLATRVAQE-HGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDL 194
Query: 265 SRISCIIVDEAHERSLNTDLLLALVKDLL-CRRFDLRLVIMSATADAHQLSKYFYDCGIS 323
S I++DEAHER++ TDL+L +K L+ R DLR+++MSAT A + S++F + I
Sbjct: 195 REYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPIL 254
Query: 324 HVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE-- 381
V GR F V Y+ T V V+R +++ E+ G IL FL + E++
Sbjct: 255 FVEGRKFDVKQYYLKAPTD------DIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKA 308
Query: 382 ---------WACEKFDAPSAVALPFHGQLSFDEQFCVFKSYPG-RRKVIFATNVAETSLT 431
+ ++ P V P + L +Q VF G +RKV+F+TN+AETS+T
Sbjct: 309 VTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVT 368
Query: 432 IPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSD 491
I GVKFV+DSG+ K + G+ L +SQ+SA QR+GRAGR G+ +RLY +SD
Sbjct: 369 ISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESD 428
Query: 492 FETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 551
+ P EPEI R + VL + G+ D+ + + + P +AI M ++ L +LGA+
Sbjct: 429 YVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALD 488
Query: 552 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSD 611
++T+ G+ + L ++P L +++ +G V+ V + S
Sbjct: 489 TRG---KITKRGQQMALLPLQPHLSSVLIKA--SEVGCLSQVIDIVSCLSVENLLLNPSP 543
Query: 612 DEKIKADCLKVQFCH---RNGDLFTLLSVY--------REWDSLPREERNKWCWENSVNA 660
+E+ + + ++ C+ R GDL L ++ + D+ ERN WC ++
Sbjct: 544 EERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDA--SSERNDWCKGLCISI 601
Query: 661 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEII---LSALAENVAM 717
+ + +L ++ + I S K E + + +I+ L+ +N A+
Sbjct: 602 RGFKNVIRVRDQLRVYCKRLFSSI--SEEDEESKKIGEDGELISKILKCFLTGFIKNTAI 659
Query: 718 FSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSL 777
G Y TG+ + +HPS S+L + +++ E + Y V+ + L
Sbjct: 660 --GMPDRSYRTVSTGEPISIHPS-SMLFMNKSCPGIMYTEYVFTTKGYARNVSRIELSWL 716
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 251/452 (55%), Gaps = 32/452 (7%)
Query: 246 VIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMS 305
+ YMTD LL+ M D L R I++DEAHER++ TD+L+ L+K++ +R DL+LV+MS
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 306 ATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTE 365
AT DA + YF + + V GR PV++ Y P Y+ +R V ++H E
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTP------EPERDYLEAAIRTVVQIHMCE 114
Query: 366 K-EGTILAFLTSKMEVEWACEKF---------DAPSAVALPFHGQLSFDEQFCVFKSYPG 415
+ EG +L FLT + E+E AC++ + +P + L Q +F+ P
Sbjct: 115 EVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPP 174
Query: 416 R-------RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSA 468
RKV+ +TN+AETSLTI GV FVID G K+ + P + L V +S++SA
Sbjct: 175 NKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASA 234
Query: 469 NQRAGRAGRTEPGRCYRLYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFD 527
QR GRAGRT PG+C+RLY++ +++ N PEI R +LG VL++ LGI D+ FD
Sbjct: 235 QQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFD 294
Query: 528 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 587
F+D P+ + + A+ L LGA+ ++G +LT G + + ++P+L K++++
Sbjct: 295 FMDPPAPETLMRALELLNYLGALD-DSG--DLTRLGSMMAEFPLDPQLAKMVIASTDYSC 351
Query: 588 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE 647
E L + A+++ C + ++ K AD K++F H +GD TLL+VY +
Sbjct: 352 SNEILSVTAMLSVPQ---CFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQ--NN 406
Query: 648 ERNKWCWENSVNAKSLRRCQDTIKELETCLEK 679
E +WC++N + +SL+ ++L +++
Sbjct: 407 EDPQWCYDNFIQYRSLKSADSVRQQLARIMDR 438
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 211/745 (28%), Positives = 345/745 (46%), Gaps = 96/745 (12%)
Query: 2 VGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMKD 61
+G+W ++ G + VV D E+ ++ L K E E W +D
Sbjct: 62 IGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKESEAQISWFAPED 121
Query: 62 DKCDEIANVSNRLGSRNSYAVFCELNERKKGEFKNGMHCVLK--YLD-DPQNVAKKESYD 118
+ N S N ++ E+K + M + Y+D D + + ++ D
Sbjct: 122 HGYGTEVSTKNTPCSENK----LDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPD 177
Query: 119 ANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETG 178
+D ED Q+ + E + + LP Y +++++ I Q+ V+ GETG
Sbjct: 178 GTLDQKLLEDLQK----KKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETG 233
Query: 179 CGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVR-EESRGCYEDDSVICY 233
CGK+TQ+ QF+ D+ G + IVCTQPR+I+AIS+A+RV E + C +S
Sbjct: 234 CGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQ 293
Query: 234 PSFSS-AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDL 292
S ++Y T +LQ +D LS +S I++DE HER+L +D+L+ +VKDL
Sbjct: 294 IRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDL 353
Query: 293 LCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPV----------DVRYVPCA-- 340
L R DL++++MSAT +A + S+YF +C + H+ G FPV +RYVP
Sbjct: 354 LNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKE 413
Query: 341 -----------------------------------------TAGTSAVASYVSD------ 353
+A T V + D
Sbjct: 414 HRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLN 473
Query: 354 -VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQ 406
+V ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 474 LIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQ 533
Query: 407 FCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQ 465
VFK + PG RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS+
Sbjct: 534 TQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 593
Query: 466 SSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQG 525
++A QR GRAGR +PG CY LY+ Q PEI R L L+I L + +
Sbjct: 594 ANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY 653
Query: 526 F--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCF 583
F +D PS +A+ ++IR+L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 654 FLSRLMDPPSNEAVLLSIRHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGA 710
Query: 584 RRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWD 642
L +AA ++ +G EKI AD + + D T+++ + W+
Sbjct: 711 LFCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKDTRSDHLTVVNAFEGWE 767
Query: 643 SLPR---EERNKWCWENSVNAKSLR 664
R +CWE +++ +L+
Sbjct: 768 EARRRGFRYEKDYCWEYFLSSNTLQ 792
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 250 bits (638), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 190/641 (29%), Positives = 312/641 (48%), Gaps = 90/641 (14%)
Query: 104 YLD-DPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDIL 162
Y+D D + + ++ + ++D ED QR + + E +R LP Y +++++
Sbjct: 155 YIDRDSEYLLQENEPNLSLDQHLLEDLQR---KKTDPRYI-EMQRFRKKLPSYGMQKELV 210
Query: 163 RRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRV- 217
I Q+ V+ GETGCGK+TQ+ QF+ D+ G + IVCTQPR+I+AIS+A+RV
Sbjct: 211 NLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVA 270
Query: 218 REESRGCYEDDSVICYPSFSS-AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAH 276
E + C +S S ++Y T +LQ +D LS +S I++DE H
Sbjct: 271 TERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIH 330
Query: 277 ERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPV---- 332
ER+L +D+L+ ++KDLL R DL++++MSAT +A + S+YF +C + H+ G FPV
Sbjct: 331 ERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYL 390
Query: 333 ------DVRYVPCA-------------------------------------------TAG 343
+RYVP +A
Sbjct: 391 LEDIIEKIRYVPDQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELRTRYSAS 450
Query: 344 TSAVASYVSD-------VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAP 390
T V + D + ++ + E++G IL FL ++ ++ + F +
Sbjct: 451 TVDVLQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSD 510
Query: 391 SAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYF 449
+ +P H + Q VF K+ PG RK++ ATN+AETS+TI V +VID G +KE++F
Sbjct: 511 KFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 570
Query: 450 EPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLG 509
+ ++ + VS+++A QR GRAGR +PG CY LY+ Q PEI R L
Sbjct: 571 DTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLE 630
Query: 510 IAVLRILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 567
L+I L + + F +D PS +A+ ++I++L++L A+ ELT G L
Sbjct: 631 ELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQE---ELTPLGVHLA 687
Query: 568 KLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHR 627
+L +EP +GK+IL L +AA ++ +G EKI AD + +
Sbjct: 688 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKE 744
Query: 628 N-GDLFTLLSVYREWDSLPR---EERNKWCWENSVNAKSLR 664
D T+++ + W+ R +CWE +++ +L+
Sbjct: 745 TRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQ 785
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 202/682 (29%), Positives = 331/682 (48%), Gaps = 90/682 (13%)
Query: 133 DWS-RIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD 191
+WS R+++ + R + LP + R+ I+ I Q++V+ GETG GKSTQ+VQF+ D
Sbjct: 557 NWSERVKSPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILD 616
Query: 192 ----SGIAAEQSIVCTQPRKIAAISLAQRV---REESRGCYEDDSVICYPSFSSAQHFDS 244
SG Q++VCTQPR+I+AISLA+RV R+ + G SV S S +
Sbjct: 617 HYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEF 676
Query: 245 KVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIM 304
+ + QH + LS +SC++VDE HERS+ D+LL L+K ++ R +L++++M
Sbjct: 677 CTTGLLLRRIQQHGLGF--LSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILM 734
Query: 305 SATADAHQLSKYFYDCGISHVVGRNFPVDVRY----------------VPCATAGTSAVA 348
SAT ++ YF + G H+ GR FP+ Y VP +
Sbjct: 735 SATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEID 794
Query: 349 SYVSDVVRMVGEVHTT--EKEGTILAFLTSKMEVEWACEKF---DAPSAVALPFHGQLSF 403
++ + R+V + G+IL FL + + D LP H L+
Sbjct: 795 YHL--ISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNT 852
Query: 404 DEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRV 463
EQ FK+Y +RK+I ATN+AETS+TI V VIDSG VK+ ++ + +
Sbjct: 853 SEQRRCFKTY-TKRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWA 911
Query: 464 SQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIR- 521
S+++ QR GRAGR + G CY+LY++ E L Q PE+ R L L ++ L R
Sbjct: 912 SRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRF 971
Query: 522 ----------DVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKL 569
++ F ID P+ +++A++ L+Q+GA+ ++ +LT G++LV L
Sbjct: 972 SSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSE---DLTGLGEYLVSL 1028
Query: 570 GIEPRLGKLILSCFRRRLG--REGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHR 627
I+ +LGKL++ F G L + A+++ S DDE A ++ +
Sbjct: 1029 PIDLKLGKLLV--FGSIFGYLEPALTITAILSTKSPFL----GDDE---AREIRSKQSQG 1079
Query: 628 NGDLFTLLSVYREW----DSLPREERNKWCWENSVNAKSL---RRCQDTIKELETCLEKE 680
GD+ VY W ++ ++ +WC E ++ +L R+ ++ + E LE
Sbjct: 1080 WGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELT 1139
Query: 681 LAIIIPSYWLWNPHKYTEYDKWLKEIILSALAEN-----------VAMFSGYDQLGYEVA 729
+ ++ ++ TE L +I +AL+ N VA FSG ++ E
Sbjct: 1140 TKKLTGNFDWYS----TENLTVLSTLIAAALSPNVVKCVYPDKKFVASFSGSLEMEQEAR 1195
Query: 730 MT------GQHVQLHPSCSLLI 745
+T Q + +HPS ++ +
Sbjct: 1196 LTKFYDQNNQRLFIHPSSTMFV 1217
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/560 (29%), Positives = 280/560 (50%), Gaps = 61/560 (10%)
Query: 136 RIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---- 191
RI++ + + + + LP + ++ I+ I +++++ GETG GKSTQ+VQF+ D
Sbjct: 588 RIKSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQK 647
Query: 192 -SGIAAEQSIVCTQPRKIAAISLAQRVREES-RGCYEDDSVICYPSFSSAQHFDSKVIYM 249
G + IVCTQPR+I+AI LA+RV +E C E+ + + +++ +M
Sbjct: 648 EKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVI--RGVNKTKASTRIKFM 705
Query: 250 TDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATAD 309
T L++ N R + + +++DE HERS++TDL++ L+K+LL R +++V+MSAT +
Sbjct: 706 TTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVN 765
Query: 310 AHQLSKYFYDCGISHVVGRNFPV----------------------------------DVR 335
K+F H+ GR FP+ D +
Sbjct: 766 VDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQ 825
Query: 336 YV-PCATAG--TSAVASY--VSDVVRMVGE-VHTTEKEGTILAFLTSKMEVEWACE---- 385
Y+ P A + TS +Y + VV V + + G+I+ FL E+ C
Sbjct: 826 YLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLAN 885
Query: 386 KFDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVK 445
K + + LP H L+ ++Q VFK Y G+RKV+ +TN+AETS+TI ID+G K
Sbjct: 886 KSNEADFMVLPLHSALTPEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAK 945
Query: 446 ESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIH 504
++ P L +S++ QR GRAGR G Y+L+SK+ +E ++ PEI
Sbjct: 946 SMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIK 1005
Query: 505 RVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEE 562
R+ L L + A+GI+DV+ F +DAP A++ A R L +G + ++ LT+
Sbjct: 1006 RIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDK--SLTQL 1063
Query: 563 GKFLVKLGI-EPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLK 621
G+F+ + + + + GKL++ ++L +++ F + EKIK K
Sbjct: 1064 GQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCK 1123
Query: 622 VQFCHRNGDLFTLLSVYREW 641
+ GDLF +L + R++
Sbjct: 1124 YE---SRGDLFAVLEIVRDY 1140
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 279/608 (45%), Gaps = 109/608 (17%)
Query: 150 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQP 205
+ LP+ + ++I+ ++ ++++ G TGCGK+TQ+ Q++ D I AA+ +IV TQP
Sbjct: 388 ESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQP 447
Query: 206 RKIAAISLAQRV-----REESRGCYED---DSVICYPSFSSAQHFDSKVIYMTDHCLLQH 257
R+I+A+S+A+RV E + C +SV+ P S +++ T LL+
Sbjct: 448 RRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHAS--------MLFCTVGVLLRK 499
Query: 258 FMNDRDLSRISCIIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYF 317
+ + IS +IVDE HER +NTD LL +++D++ ++R+++MSAT D +YF
Sbjct: 500 L--ESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYF 557
Query: 318 YDCGISHVVGRNFPVDVRYVPCATAGTSAVAS---------------------------- 349
++C I V GR FPV Y+ T +
Sbjct: 558 FNCPIIEVFGRTFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDEEGGDDEETNCNLVCGDD 617
Query: 350 YVSDVVRMVGE-----------------VHTTEKEGTILAFLTSKMEVEWACEK------ 386
Y + R + + + T G +L FL + +A +K
Sbjct: 618 YGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPG-WNLIYAMQKHLEMNP 676
Query: 387 -FDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMV 444
F + S LP H Q+ DEQ VF P G KVI +TN+AETS+TI V +VIDS
Sbjct: 677 HFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQ 736
Query: 445 KESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEI- 503
K F M S+++ QR GRAGR PG C+ L SK+ F+ + PEI
Sbjct: 737 KVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIF 796
Query: 504 ----HRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFEL 559
H V L I +LR+ +G + I+ P A+ A L +L A+ N+ EL
Sbjct: 797 RTPLHEVALSIKLLRLGGIGHFLSKA---IEPPPLDAVIEAEHTLRELDALDSND---EL 850
Query: 560 TEEGKFLVKLGIEPRLGK-LILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 618
T G+ L KL IEPRLGK +I+ C + + S+ C E ++
Sbjct: 851 TPLGRILAKLPIEPRLGKMMIIGCI--------FYVGDALCTISAATCF----PEPFISE 898
Query: 619 CLKVQFCHRN------GDLFTLLSVYREWDSL---PREERNKWCWENSVNAKSLRRCQDT 669
++ + HRN D LLSV++ WD + ++C +N +LR +
Sbjct: 899 GRRLGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEA 958
Query: 670 IKELETCL 677
+L+ L
Sbjct: 959 KVQLKDIL 966
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,739,697
Number of Sequences: 539616
Number of extensions: 21484387
Number of successful extensions: 53620
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 52822
Number of HSP's gapped (non-prelim): 304
length of query: 1387
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1257
effective length of database: 121,419,379
effective search space: 152624159403
effective search space used: 152624159403
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)