Your job contains 1 sequence.
>000627
MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG
LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKREL
LRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRP
AAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISSSN
RPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAV
RDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHL
ILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWR
DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG
SMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE
LNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIE
REKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEIS
TAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCE
RWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISE
LQNACSTLHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRA
LEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK
CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGL
LQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVD
RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELLSDSEFFCRGIEAKDVL
QEVVDVALECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFA
LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADV
AKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACY
QCDEWYHIDCVKLLSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNS
RKKLRKAEPGLAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRRAAKKRTVLDSLCPFIY
TQQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000627
(1383 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 2114 9.2e-267 3
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 460 3.4e-52 4
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 446 1.9e-50 4
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 447 2.9e-50 4
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 436 1.3e-49 3
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 435 2.8e-49 3
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 443 7.1e-49 3
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 448 9.4e-49 3
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 448 9.7e-49 3
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 448 9.8e-49 3
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 446 2.7e-48 3
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 449 3.5e-48 3
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 449 9.1e-48 3
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 457 9.9e-48 3
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 435 1.7e-47 3
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 424 1.7e-47 4
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 435 2.1e-47 3
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 422 2.2e-47 4
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 427 2.5e-47 3
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 422 2.8e-47 4
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 425 4.4e-47 4
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 425 1.0e-46 3
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 444 1.1e-46 3
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 425 1.7e-45 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 426 3.4e-45 3
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 415 3.7e-45 3
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 422 4.6e-45 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 422 4.6e-45 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 425 6.0e-43 4
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 425 1.6e-42 2
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 471 5.1e-41 2
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 471 5.5e-41 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 466 9.3e-41 2
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 466 9.3e-41 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 463 5.1e-40 2
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 405 5.9e-40 3
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 462 9.8e-40 3
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 462 9.8e-40 3
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 462 1.1e-39 3
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 459 2.2e-39 2
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 435 3.6e-39 2
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 371 8.4e-35 5
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 371 8.4e-35 5
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 332 3.5e-34 4
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 415 9.2e-34 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 329 7.2e-33 3
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 403 1.0e-31 2
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 377 2.1e-29 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 366 4.9e-29 3
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 353 2.5e-28 1
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 310 7.0e-23 2
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 301 2.7e-21 2
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 262 1.4e-18 1
POMBASE|SPAC343.11c - symbol:msc1 "multi-copy suppressor ... 164 2.0e-18 4
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 235 1.2e-15 1
POMBASE|SPBP19A11.06 - symbol:lid2 "Lid2 complex subunit,... 166 3.3e-15 4
CGD|CAL0001611 - symbol:orf19.2476 species:5476 "Candida ... 130 2.8e-12 3
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 199 4.7e-12 1
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 193 9.9e-11 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 194 1.7e-10 3
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 193 2.6e-10 2
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 172 2.0e-09 2
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 183 2.6e-09 2
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 193 2.8e-09 2
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 183 3.3e-09 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 176 5.0e-09 1
UNIPROTKB|F5GYH2 - symbol:KDM4C "Lysine-specific demethyl... 183 5.1e-09 2
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 183 5.3e-09 2
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 186 9.7e-09 2
UNIPROTKB|E7EV17 - symbol:KDM4C "Lysine-specific demethyl... 183 1.1e-08 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 183 1.4e-08 2
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 180 2.0e-08 2
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 183 2.2e-08 2
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 182 3.1e-08 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 169 3.1e-08 1
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 168 4.1e-08 1
SGD|S000004788 - symbol:ECM5 "Non-essential protein of un... 123 4.6e-08 3
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 167 5.1e-08 1
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 160 7.9e-08 1
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 165 8.5e-08 1
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 173 1.0e-07 2
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 164 1.1e-07 1
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 164 1.1e-07 1
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 174 1.5e-07 2
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 175 1.7e-07 2
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 175 1.8e-07 2
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 181 1.9e-07 3
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 174 2.0e-07 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 183 2.0e-07 2
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 175 2.1e-07 2
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 181 2.4e-07 3
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 181 2.4e-07 3
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 174 2.5e-07 2
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 158 4.7e-07 1
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 158 4.7e-07 1
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 161 4.7e-07 1
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 175 1.1e-06 3
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 151 1.4e-06 2
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 175 1.5e-06 3
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 174 1.5e-06 3
WARNING: Descriptions of 37 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 2114 (749.2 bits), Expect = 9.2e-267, Sum P(3) = 9.2e-267
Identities = 423/861 (49%), Positives = 598/861 (69%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR +LPDLFDAQPDLLFQLVTML+P+VL EN VPVY+VLQEPGNFVITFP+S+HAGFNFG
Sbjct: 114 MRKTLPDLFDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFG 173
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDL-DSKVSPYLKRE 119
LNCAEAVNFA ADWLP+GG GA+LY+ Y K +V+SHEELLCVVAK + +++ S +LK+E
Sbjct: 174 LNCAEAVNFATADWLPYGGSGAELYRLYRKPSVISHEELLCVVAKGNCCNNEGSIHLKKE 233
Query: 120 LLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCR 179
LLR+Y+KE+ WRE+LW+ GI++S+PM +C + VG EEDPTCIIC+Q+L+LSA+ C CR
Sbjct: 234 LLRIYSKEKTWREQLWKSGILRSSPMFVPECADSVGIEEDPTCIICQQFLHLSAIVCNCR 293
Query: 180 PAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSS 239
P+ F CLEHW+HLCEC+ KL L YR+TLAEL + V++ +R S +
Sbjct: 294 PSVFACLEHWKHLCECEPTKLRLEYRYTLAELDMMVQEVEKFGGCKTQETKISQRPSSGT 353
Query: 240 NRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDA 299
R L KK +G++V+ ++ ++WL + KVL FSS Y TLL+E+EQFLWAG EMD
Sbjct: 354 KRSIALNKKQEGMQVSQARPADKWLLRASKVLDAAFSSVEYATLLKESEQFLWAGSEMDR 413
Query: 300 VRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGH 359
VRD+ L + + WAE + DCL K E + DS KV L+ ++ELL +P+PC G+
Sbjct: 414 VRDVTKSLNKAKIWAEAVSDCLSKVEGEVN---DDSMKVHLEFIDELLRVNPVPCFNSGY 470
Query: 360 LILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVW 419
L L++YAEEAR L ++I++ALS+ I++LELL+S S PI + + E LS++ISSAK+
Sbjct: 471 LKLKDYAEEARKLSEKIDSALSSSPTITQLELLHSEVSRSPISLKKHEILSKKISSAKML 530
Query: 420 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALR 479
++ +++ P IE+D L+KL SE L+L + +PET+ +L ++ ++ES R + ++ L
Sbjct: 531 AKRAKRYLTDAKPPGIEMDALFKLNSEMLELHVQLPETEGILDLVKKSESARDKSNKVLT 590
Query: 480 GSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVID 539
GS+SL+ VE LL E F++N+PEL +L+QYH D + WI+R ND++V++ KDQ +I
Sbjct: 591 GSLSLENVEELLHEFDSFSINVPELNILRQYHVDTLSWISRFNDVMVDVREGKDQRKLIS 650
Query: 540 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQI 599
+L+ +L++GASL IQV+ LPLVEVELKKA CREKA + LDFI Q+ +EAVIL I
Sbjct: 651 DLSSLLRDGASLGIQVEGLPLVEVELKKASCREKARTVYTARKSLDFIEQLLSEAVILHI 710
Query: 600 EREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEI 659
E E++F+++SG+L+ A WEERA+ IL ++ QM E +D++R S +I VLP+L ++N I
Sbjct: 711 EEEEIFVEISGILSTARCWEERASTILENETQMYELKDLVRMSVNIDAVLPTLQGIENTI 770
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNC 719
S+A++WL+ SE FL++ ++A + CS+L L LKDLV+Q+K L + L+E LE ++ NC
Sbjct: 771 SSAETWLQKSEPFLSATSSMASSPCSMLELPVLKDLVTQAKLLNVQLQEPRILETLLLNC 830
Query: 720 ERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEIS 779
ERWQ LLQ+ LLD I DG ++++ KI LIT ++SA GL+LG +F E+
Sbjct: 831 ERWQCDNHQLLQETEDLLDNAKIDDGTHSNILPKIMDLITRVDSARRSGLALGLNFDELP 890
Query: 780 ELQNACSTLHWCKKALSFLSVSPS---LEDV--ESLMAVA----EGLSTRCFSS--MLWN 828
+L+ A L WC K ++ S SP+ LEDV SL + EG + L
Sbjct: 891 KLRTASLKLGWCCKTITLSSSSPTSELLEDVGKPSLQHIQQHLKEGQTLEILPEEYYLGK 950
Query: 829 SLIH----GVKWLKRALEVIS 845
L+ G++W KRA +V++
Sbjct: 951 RLMELKDTGLEWAKRARKVVT 971
Score = 449 (163.1 bits), Expect = 9.2e-267, Sum P(3) = 9.2e-267
Identities = 91/172 (52%), Positives = 122/172 (70%)
Query: 1151 SKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQK-LMELNRIGSQWADVAKKVVLDSG 1209
S+LLE + KP++ IQ +LKEG + I P+++Y K LMEL G +WA A+KVV DSG
Sbjct: 915 SELLEDVGKPSLQHIQQHLKEGQTLEILPEEYYLGKRLMELKDTGLEWAKRARKVVTDSG 974
Query: 1210 ALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHID 1269
AL+L+ VFELI+EGENLPV+ E+EL+SLRARSML+CIC KPY+ ++M++C QC EWYH
Sbjct: 975 ALALEDVFELISEGENLPVHAEQELQSLRARSMLHCICLKPYNSRSMVSCSQCGEWYHTY 1034
Query: 1270 CVKLLSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSR 1321
C+KL P+ Y+C+AC P AE +TPQ +D R EP+ PS +R
Sbjct: 1035 CLKLHWRPKAYVCSACCPLAE--TTPQ-IDPARAT----EPERPSLNQRRTR 1079
Score = 68 (29.0 bits), Expect = 1.6e-226, Sum P(3) = 1.6e-226
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 927 EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHG--SVSM 984
++++ D W +R +++V T G +L + + I + + ++ + + SM
Sbjct: 950 KRLMELKDTGLEWAKRARKVV-TDSGAL-ALEDVFELISEGENLPVHAEQELQSLRARSM 1007
Query: 985 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C+C + + + CS C + YH CL+ +AY+C C
Sbjct: 1008 LHCICLKPYNSR-SMVSCSQCGEWYHTYCLKL----HWRPKAYVCSAC 1050
Score = 61 (26.5 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 52/291 (17%), Positives = 117/291 (40%)
Query: 688 RLESLKDLVSQSK-FLKISLKEQTELEKVIN-NCERWQNHASSLLQDARCLLD---KDDI 742
++ S K L ++K +L + E++ + N E + H L + +LD K +
Sbjct: 523 KISSAKMLAKRAKRYLTDAKPPGIEMDALFKLNSEMLELHVQ--LPETEGILDLVKKSES 580
Query: 743 GDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISEL-QNACSTLHWCKKALSFLSVS 801
SN +++ L ++E + S + E++ L Q TL W + F V
Sbjct: 581 ARDKSNKVLTGSLSL-ENVEELLHEFDSFSINVPELNILRQYHVDTLSWISR---FNDVM 636
Query: 802 PSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFK-------RCK 854
+ + + + LS+ + G+ ++ +E+ A C+ K R
Sbjct: 637 VDVREGKDQRKLISDLSSLLRDGASLGIQVEGLPLVE--VELKKASCREKARTVYTARKS 694
Query: 855 LSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKE 914
L +E++L+ ++ + E++ + + W+E+ ++ + M +LK+
Sbjct: 695 LDFIEQLLSEAVILHIEEEEIFVEISGILSTARCWEERASTIL------ENETQMYELKD 748
Query: 915 LGEAAA-FDC--PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 962
L + D P L+ + + + E W Q+ + + + +S +L+
Sbjct: 749 LVRMSVNIDAVLPTLQGIENTISSAETWLQKSEPFLSATSSMASSPCSMLE 799
Score = 46 (21.3 bits), Expect = 3.3e-224, Sum P(3) = 3.3e-224
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 788 LHWCKKALSFLSVSPSL--EDVESLMAVAEGLSTRC---FSSMLWNSLIH 832
L W K+A ++ S +L EDV L++ E L S+ S++H
Sbjct: 960 LEWAKRARKVVTDSGALALEDVFELISEGENLPVHAEQELQSLRARSMLH 1009
Score = 45 (20.9 bits), Expect = 6.9e-37, Sum P(3) = 6.9e-37
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 835 KWLKRALEVISAPCKFKRCK--LSDVEEVL-AGCKGINFSFPVVIGELTSAIQKHKLWQE 891
KWL RA +V+ A L + E+ L AG + + ++T ++ K K+W E
Sbjct: 376 KWLLRASKVLDAAFSSVEYATLLKESEQFLWAGSEMDR------VRDVTKSLNKAKIWAE 429
Query: 892 QV 893
V
Sbjct: 430 AV 431
Score = 44 (20.5 bits), Expect = 9.2e-267, Sum P(3) = 9.2e-267
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1349 SGIDNLWWHNRKPFRRAAKKRTVLDSLCPFIYT 1381
+ +++L W RK +R K+ + L P+ +T
Sbjct: 1085 AAVNDLKWKTRKHIKRTTKRSPQVHIL-PWFFT 1116
Score = 42 (19.8 bits), Expect = 6.6e-221, Sum P(2) = 6.6e-221
Identities = 11/61 (18%), Positives = 22/61 (36%)
Query: 785 CSTLHW------CKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLK 838
C LHW C +P ++ + L+ R + ++ ++ +KW
Sbjct: 1035 CLKLHWRPKAYVCSACCPLAETTPQIDPARATEPERPSLNQRRTRMVATDAAVNDLKWKT 1094
Query: 839 R 839
R
Sbjct: 1095 R 1095
Score = 37 (18.1 bits), Expect = 4.7e-36, Sum P(3) = 4.7e-36
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 878 ELTSAIQKHKLWQEQV 893
EL K K W+EQ+
Sbjct: 233 ELLRIYSKEKTWREQL 248
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 460 (167.0 bits), Expect = 3.4e-52, Sum P(4) = 3.4e-52
Identities = 92/217 (42%), Positives = 137/217 (63%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF++QPDLL QLVT++NP++L+E+GVP+Y Q G FVITFPR+YH+GFN G
Sbjct: 502 MKGLAPELFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQG 561
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLC-VVAKSD-LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y+ ++ V SH+E+ C + AK+D L+ +++ +++
Sbjct: 562 FNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCVFSHDEMACNIAAKADSLELELACAVQK 621
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + +E++ RE+ ++ G+ S + P+ E+ C CR YLSA+ C C
Sbjct: 622 DMNAMIQEEKILREKAYKLGMWHSQQVDYDILPD-----EERQCAKCRTTCYLSAITCPC 676
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF 215
P VCL H + LC C R L Y++TLAEL F
Sbjct: 677 SPEQVVCLHHTQDLCSCPARNYTLNYKYTLAELKTFF 713
Score = 158 (60.7 bits), Expect = 3.4e-52, Sum P(4) = 3.4e-52
Identities = 82/343 (23%), Positives = 148/343 (43%)
Query: 407 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM--- 463
+ L+ R S W V K + +++ L L +EA + K+ PETD+L M
Sbjct: 714 QALTARAESYDDWASKVNKILKADQDNKSDLEELRCLLAEA-EKKM-YPETDLLNDMRQV 771
Query: 464 IGQAESCRARCSEALRGSMSLK--------TVELLLQELGDFTVNMPELEL-LKQYHSDA 514
I A+ C + L G + +L ++EL F + +L ++Q A
Sbjct: 772 IQNADRCTIMAQQLLNGKRQTRYRSGGGKSQNQLTVEELRAFINKLYDLPCTIRQ----A 827
Query: 515 IFWIARLNDI----LVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 570
F A LN + + + + L +L EGA L +++ L ++ L++A
Sbjct: 828 PFLKALLNRVEQFQQQSFDMLAEDMAGSSALQGLLDEGAGLDVELPQLAVLRQRLEQARW 887
Query: 571 REKALKACD--TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
E +A D + LD +R++ + V L E+ L +L WEE+A ++L
Sbjct: 888 VEAVQEASDQPADLSLDCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNML 947
Query: 627 IHKAQMC--EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + E I I LPS ++++ +S A+ W+ ++ A P
Sbjct: 948 TARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRAREWIMEADALQAGGRI--PG-- 1003
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L +L +LVS++K + + L+ T LE +I+ + W+ A+
Sbjct: 1004 ----LVTLSELVSRAKGIPVMLEALTRLESLISEVQAWKESAA 1042
Score = 124 (48.7 bits), Expect = 2.8e-49, Sum P(4) = 2.8e-49
Identities = 65/277 (23%), Positives = 123/277 (44%)
Query: 778 ISELQNACSTLHWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHGV 834
+ EL C HW +KA + L+ P S+E +E+ + + + S + L + +
Sbjct: 929 LQELLTVCE--HWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRAR 986
Query: 835 KWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT---SAIQKHKLWQE 891
+W+ A + + A + L + E+++ KGI PV++ LT S I + + W+E
Sbjct: 987 EWIMEA-DALQAGGRIPG--LVTLSELVSRAKGI----PVMLEALTRLESLISEVQAWKE 1039
Query: 892 QVHQFFNLKCAQQSWSLMLQLK-ELGEAAAFDCPELEKVL--SKVD-KVENWKQRCKEIV 947
+ F L+ + S +L + E G + E ++ K D K+++ ++++
Sbjct: 1040 SAAKTFLLRNSSLSLLEVLCPRCETGSQKSKSKKAKEGLVPCKKADVKLDSLFD-VEKVL 1098
Query: 948 GTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGS--------VSMTLCMCCESDSKELEF 999
TS D S + L + Q SL + + S ++ T+C+C + +
Sbjct: 1099 STSK-DTASAMATLSDVHQKELDSLSMLRTSNESKFQSSPSCLAPTVCLCHTVPAGPM-- 1155
Query: 1000 LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1036
L C C+D YH C+ P D + ++CP C+ E
Sbjct: 1156 LQCELCRDAYHSGCV-PGFKDIQIGQPWLCPLCKRSE 1191
Score = 102 (41.0 bits), Expect = 2.2e-46, Sum P(4) = 2.2e-46
Identities = 89/420 (21%), Positives = 170/420 (40%)
Query: 283 LLREAEQFLWAGFEMDAVRDMVNKL-------IEGRRWAEGIRDCLHKAENWSSLPGSDS 335
LL EAE+ ++ E D + DM + I ++ G R +++ S
Sbjct: 750 LLAEAEKKMYP--ETDLLNDMRQVIQNADRCTIMAQQLLNGKRQTRYRSGGGKSQNQLTV 807
Query: 336 EKVRLDCVNELLGFDPLPCN---EPGHLILQNYAEEARSLIQEINAALSACSKISELELL 392
E++R +N+L +D LPC P L N E+ + Q + + S L+ L
Sbjct: 808 EELRA-FINKL--YD-LPCTIRQAPFLKALLNRVEQFQQ--QSFDMLAEDMAGSSALQGL 861
Query: 393 YSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKI 452
+GL + + + L QR+ A+ W ++V++ S++ PA + +D + +L + + L
Sbjct: 862 LDEGAGLDVELPQLAVLRQRLEQAR-WVEAVQEA-SDQ-PADLSLDCMRRLIDQGVGLAP 918
Query: 453 DV-PETDM--LLKMIGQAESCRARCSEAL--RGSMSLKTVELLLQELGDFTVNMPELELL 507
E M L +++ E + L R S++T+E + E+ +P L
Sbjct: 919 HACVERTMARLQELLTVCEHWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQL 978
Query: 508 KQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKK 567
K S A WI D L GR + EL + + + ++ L +E + +
Sbjct: 979 KDCVSRAREWIMEA-DAL-QAGGRIPGLVTLSEL---VSRAKGIPVMLEALTRLESLISE 1033
Query: 568 AHC-REKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL 626
+E A K + + +V ++ K G++ + AD+
Sbjct: 1034 VQAWKESAAKTFLLRNSSLSLLEVLCPRCETGSQKSKSKKAKEGLVPC------KKADVK 1087
Query: 627 IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLK--NSELFLASAFAVAPASC 684
+ + + E ++ S+D + +L +V + + S L+ N F +S +AP C
Sbjct: 1088 LDS--LFDVEKVLSTSKDTASAMATLSDVHQKELDSLSMLRTSNESKFQSSPSCLAPTVC 1145
Score = 69 (29.3 bits), Expect = 3.4e-52, Sum P(4) = 3.4e-52
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 924 PELEKVLSKVDKVENWKQRC-KEIVGTSVGDKNSLLGLLQKIKQSVHRSLYI-YNKPHGS 981
PE++K K++K N K+R KEI DK + +K S SL N
Sbjct: 1368 PEIKKEHEKLEK--NSKRRLEKEITEGQYRDK-----IKKKRTTSPSNSLSDPSNSDDSE 1420
Query: 982 VSMTLCM---CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
++C C + + E+ ++ C +C +H C+ ++ E YIC C
Sbjct: 1421 EDWSVCSAKRCQQPEGNEVNWVQCDGSCNQWFHQVCVG-VSAEQAENEDYICVSC 1474
Score = 64 (27.6 bits), Expect = 2.8e-49, Sum P(4) = 2.8e-49
Identities = 48/234 (20%), Positives = 96/234 (41%)
Query: 517 WIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDL--PLVEVELKKAHCREKA 574
W +++N IL +D + ++EL C+L E DL + +V C A
Sbjct: 726 WASKVNKIL---KADQDNKSDLEELRCLLAEAEKKMYPETDLLNDMRQVIQNADRCTIMA 782
Query: 575 LKACDTKMPLDFIRQVTAEAVILQIEREKLFID--------------LSGVLAAAMRWEE 620
+ + K + L +E + FI+ L +L ++++
Sbjct: 783 QQLLNGKRQTRYRSGGGKSQNQLTVEELRAFINKLYDLPCTIRQAPFLKALLNRVEQFQQ 842
Query: 621 RAADILIHK-AQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAV 679
++ D+L A + ++ + V LP L ++ + A+ W++ + AS
Sbjct: 843 QSFDMLAEDMAGSSALQGLLDEGAGLDVELPQLAVLRQRLEQAR-WVEAVQE--ASD--- 896
Query: 680 APASCSLLRLESLKDLVSQSKFLKI-SLKEQT--ELEKVINNCERWQNHASSLL 730
PA SL + ++ L+ Q L + E+T L++++ CE W+ A ++L
Sbjct: 897 QPADLSL---DCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNML 947
Score = 63 (27.2 bits), Expect = 1.4e-51, Sum P(4) = 1.4e-51
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1247 CRKPY-DEKAMIACY-QCDEWYHIDCVKLLSAP---EIYICAAC 1285
C++P +E + C C++W+H CV + + E YIC +C
Sbjct: 1431 CQQPEGNEVNWVQCDGSCNQWFHQVCVGVSAEQAENEDYICVSC 1474
Score = 57 (25.1 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAPEIYICAACK 1286
C+C M+ C C + YH CV K + + ++C CK
Sbjct: 1145 CLCHT-VPAGPMLQCELCRDAYHSGCVPGFKDIQIGQPWLCPLCK 1188
Score = 54 (24.1 bits), Expect = 1.8e-39, Sum P(4) = 1.8e-39
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 1165 IQNYLKEGLLMNIS-PK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAE 1222
+Q L EG +++ P+ RQ+L + ++W + ++ LSLD + LI +
Sbjct: 858 LQGLLDEGAGLDVELPQLAVLRQRLEQ-----ARWVEAVQEASDQPADLSLDCMRRLIDQ 912
Query: 1223 GENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1255
G L + E R + +L +C ++EKA
Sbjct: 913 GVGLAPHACVERTMARLQELL-TVCEH-WEEKA 943
Score = 52 (23.4 bits), Expect = 3.4e-52, Sum P(4) = 3.4e-52
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 748
L+ + L++ + +++ L E L VI RWQ+ + K I L +
Sbjct: 1195 LDKVLPLLASLQRIRVRLPEGDALRYVIERTVRWQHKVQQVSLPTLHPNGKVRI---LCS 1251
Query: 749 SLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLED-- 806
++ S + Q I SM++ G F L+ + S+ + + + +S LE+
Sbjct: 1252 NINSSMFQFIYSMQARHISG------FTSSQTLEGSNSSFYMLQPCIPLSELSAELEELL 1305
Query: 807 VESLM 811
VE L+
Sbjct: 1306 VEGLL 1310
Score = 49 (22.3 bits), Expect = 1.6e-41, Sum P(4) = 1.6e-41
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEK--ELKSLRARS 1241
+L EL + W + A ++ S++ + I E +++P YL +LK +R+
Sbjct: 928 RLQELLTVCEHWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRA 985
Score = 40 (19.1 bits), Expect = 9.7e-49, Sum P(3) = 9.7e-49
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 1303 TNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIANNSSVFD 1346
++ LE P + + + K +KA+ GL A S+FD
Sbjct: 1050 SSLSLLEVLCPRCETGSQKSKSKKAKEGLVPCKKADVKLDSLFD 1093
Score = 39 (18.8 bits), Expect = 1.8e-39, Sum P(4) = 1.8e-39
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 933 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQK 963
+++VE ++Q+ +++ + ++L GLL +
Sbjct: 834 LNRVEQFQQQSFDMLAEDMAGSSALQGLLDE 864
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 446 (162.1 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 90/216 (41%), Positives = 133/216 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 534 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 593
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 594 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 653
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C C
Sbjct: 654 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCSC 708
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K L YR+TL +LY +
Sbjct: 709 KPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 744
Score = 121 (47.7 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 69/337 (20%), Positives = 142/337 (42%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 748 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 805
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
AE C + + L G + + TVN + + Y + L D+
Sbjct: 806 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 865
Query: 525 LVNINGRKDQHN--VIDE-------LNCILKEGASLRIQVDDLPLVEVELKKAHCREKAL 575
L + + QH+ ++ E L +L +++ L + + L++A E+
Sbjct: 866 LNRVEDFQ-QHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQ 924
Query: 576 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 631
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 925 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 984
Query: 632 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 689
+ ++ ++I LP+ +++ + A+ WL++ E A P L
Sbjct: 985 HSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRV--PV------L 1036
Query: 690 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 726
++L +LV++ + + + L LE ++ + W+ A
Sbjct: 1037 DTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECA 1073
Score = 84 (34.6 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 26/133 (19%), Positives = 59/133 (44%)
Query: 909 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 968
+L LK P +K +K++ + + ++ E T+ + LG + +
Sbjct: 1098 LLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETA--SAMATLGEARLREMEA 1155
Query: 969 HRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNH 1023
+SL + N+ P V + +C+C ++ + + + C C+D +H C+ + +
Sbjct: 1156 LQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPM--IQCELCRDAFHTSCVAVPSISQG- 1212
Query: 1024 AEAYICPYCQYFE 1036
++CP+C+ E
Sbjct: 1213 LRIWLCPHCRRSE 1225
Score = 80 (33.2 bits), Expect = 3.4e-46, Sum P(4) = 3.4e-46
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 693
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 889 ELQDLLDVSFEFDVELPQLAEMRIRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 942
Query: 694 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
DL V + + + K L++++ E W + A SLL+
Sbjct: 943 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 980
Score = 73 (30.8 bits), Expect = 1.9e-50, Sum P(4) = 1.9e-50
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 1211 LSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIACY-QCD 1263
L ++ +EL+ AE +LP Y E+E C +P DE + C C+
Sbjct: 1451 LERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCN 1510
Query: 1264 EWYHIDCVKL---LSAPEIYICAAC 1285
+W+H CV + ++ E YIC C
Sbjct: 1511 QWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 71 (30.1 bits), Expect = 1.7e-46, Sum P(3) = 1.7e-46
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 1166 QNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1225
Q LKE L N K + L +L R ++ + A + G L ++ L ++
Sbjct: 1105 QRKLKEPL-PNGKKKSTKLESLSDLERALTESKETASAMAT-LGEARLREMEAL----QS 1158
Query: 1226 LPVYLEKELKS-LRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYI 1281
L + E +L S L+ + C+C+K MI C C + +H CV + S + I++
Sbjct: 1159 LRLANEGKLLSPLQDVDIKICLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGLRIWL 1217
Query: 1282 CAACK 1286
C C+
Sbjct: 1218 CPHCR 1222
Score = 71 (30.1 bits), Expect = 2.7e-43, Sum P(4) = 2.7e-43
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1229 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGL 1286
Score = 65 (27.9 bits), Expect = 1.2e-44, Sum P(4) = 1.2e-44
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P L++ + AR +Q++ L A ++ L+ L +R +P+ +
Sbjct: 998 EEIPAYLPNGAALKDSVQRARDWLQDVEG-LQAGGRVPVLDTLIELVTRGRSIPVHLNSL 1056
Query: 407 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 440
+L ++ + W++ +V ++ P ++ ++VL
Sbjct: 1057 PRLETLVAEVQAWKECAVNTFLTENSPYSL-LEVL 1090
Score = 63 (27.2 bits), Expect = 2.0e-44, Sum P(4) = 2.0e-44
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 839 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSF 898
Query: 446 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQ---ELGDFTVNM 501
E D+++ + E + L+ E + C + S++L + L+ L ++
Sbjct: 899 E-FDVELPQLAEMRIRLEQARWLEEVQQACLDP--SSLTLDDMRRLIDLGVGLAPYSAVE 955
Query: 502 PELELLKQYHSDAIFWIARLNDILV-----NINGRKDQHNVIDELNCILKEGASLRIQV 555
+ L++ + + W + +L ++N I+E+ L GA+L+ V
Sbjct: 956 KAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSV 1014
Score = 63 (27.2 bits), Expect = 8.5e-39, Sum P(3) = 8.5e-39
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1204
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 919 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 978
Query: 1205 VLDSGALSLDKVFELIAEGENLPVYL 1230
+ SL+ + + E E +P YL
Sbjct: 979 LKARPRHSLNSLATAVKEIEEIPAYL 1004
Score = 62 (26.9 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1152 KLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGAL 1211
KLL T P+ ++Q+ L ++ ++ L + ++W + ++ LD +L
Sbjct: 878 KLLSEET-PSAAELQDLLDVSFEFDVELPQLAEMRI-RLEQ--ARWLEEVQQACLDPSSL 933
Query: 1212 SLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1255
+LD + LI G L Y E R + +L + +D+KA
Sbjct: 934 TLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDKA 975
Score = 58 (25.5 bits), Expect = 6.9e-40, Sum P(4) = 6.9e-40
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 1110 EPLPNGKKKSTKLESLSDLERALTESKETA-SAMATLGEARLREMEA-------LQSLRL 1161
Query: 410 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 467
+ +D ++ C+ K PAA I +L +A + VP L+ I
Sbjct: 1162 ANEGKLLSPLQDVDIKICLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGLR-IWLC 1218
Query: 468 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1219 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
Query: 528 IN 529
N
Sbjct: 1273 GN 1274
Score = 56 (24.8 bits), Expect = 3.2e-44, Sum P(4) = 3.2e-44
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1039
C + + E++++ C +C +H C+ + + E YIC C ++ S
Sbjct: 1492 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRCTVKDAPS 1542
Score = 55 (24.4 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 732
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 837 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 882
Score = 51 (23.0 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 1213 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC--------RKPYDEKAMIACYQC 1262
LD + EL+ G ++PV+L L++L A + C PY ++ C +C
Sbjct: 1036 LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVL-CPRC 1094
Query: 1263 D 1263
D
Sbjct: 1095 D 1095
Score = 45 (20.9 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 716
S W N +L S F+ SC L S + +L+ +++ L++SL E EL + +
Sbjct: 1314 SLPDDW-DNRTSYLHSPFSTG-RSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTL 1370
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(4) = 0.00067
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 420 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 457
R SV+ S CP A ++ +EA+++KI+ ET
Sbjct: 216 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEET 248
Score = 41 (19.5 bits), Expect = 5.5e-46, Sum P(4) = 5.5e-46
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNK-- 977
PE + + +++ NW+ R ++++ + V D+ GLL Q+ + NK
Sbjct: 1247 PEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGS-GLLYSRWQASAGQVSDTNKVS 1305
Query: 978 -PHGSVSMTL 986
P G+ S +L
Sbjct: 1306 QPPGTTSFSL 1315
Score = 38 (18.4 bits), Expect = 7.6e-42, Sum P(4) = 7.6e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 795
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 796 LLRHL-RLVT--QDAEKC 810
Score = 38 (18.4 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 743 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 786
Score = 37 (18.1 bits), Expect = 8.8e-40, Sum P(4) = 8.8e-40
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 638 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 675
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1235 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 447 (162.4 bits), Expect = 2.9e-50, Sum P(4) = 2.9e-50
Identities = 91/216 (42%), Positives = 133/216 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 466 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 525
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 526 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 585
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ CI C+ ++SA++C C
Sbjct: 586 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCSC 640
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K L YR+TL +LY +
Sbjct: 641 KPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 676
Score = 118 (46.6 bits), Expect = 2.9e-50, Sum P(4) = 2.9e-50
Identities = 71/339 (20%), Positives = 147/339 (43%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 680 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 737
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
AE C + + L G + + TVN + + Y + L D+
Sbjct: 738 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 797
Query: 525 LVNINGRKDQHN---VIDELNCI--LKEGASLRIQVD-DLP-LVEVE--LKKAHCREKAL 575
L + + QH+ + +E+ L++ + + D +LP L E+ L++A E+
Sbjct: 798 LNRVEDFQ-QHSQKLLSEEMPSAAELQDLLDVSFEFDVELPQLAEMRTRLEQARWLEEVQ 856
Query: 576 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 631
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 857 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 916
Query: 632 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 689
+ ++ ++I LP+ +++ + A+ WL++ E P L
Sbjct: 917 HSLNSLATAVKEIEEIPAYLPNGVALKDSVQRARDWLQDVEALQVGGRV--PV------L 968
Query: 690 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS 728
++L +LV++ + + + L LE ++ + W+ A++
Sbjct: 969 DTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAAN 1007
Score = 83 (34.3 bits), Expect = 5.1e-46, Sum P(5) = 5.1e-46
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 693
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 821 ELQDLLDVSFEFDVELPQLAEMRTRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 874
Query: 694 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
DL V + + + K L++++ E W + A SLL+
Sbjct: 875 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 912
Score = 80 (33.2 bits), Expect = 2.9e-50, Sum P(4) = 2.9e-50
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 978 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1036
P V + +C+C ++ + + + C C+D +H C+ + + ++CP+C+ E
Sbjct: 1102 PVQDVELKVCLCQKAPAAPM--IQCELCRDAFHTSCVVVPSISQG-PRIWLCPHCRRSE 1157
Score = 77 (32.2 bits), Expect = 5.0e-47, Sum P(3) = 5.0e-47
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 1217 FELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS- 1275
F L EG+ L + ELK C+C+K MI C C + +H CV + S
Sbjct: 1091 FRLANEGKLLSPVQDVELK--------VCLCQKA-PAAPMIQCELCRDAFHTSCVVVPSI 1141
Query: 1276 --APEIYICAACK 1286
P I++C C+
Sbjct: 1142 SQGPRIWLCPHCR 1154
Score = 76 (31.8 bits), Expect = 2.9e-50, Sum P(4) = 2.9e-50
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 1206 LDSGALSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIAC 1259
++S L ++ +EL+ AE +LP Y E+E C +P DE + C
Sbjct: 1378 MNSFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC 1437
Query: 1260 Y-QCDEWYHIDCVKL---LSAPEIYICAAC 1285
C++W+H CV + ++ E YIC C
Sbjct: 1438 DGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1467
Score = 69 (29.3 bits), Expect = 2.5e-43, Sum P(4) = 2.5e-43
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1161 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLRSVQDRVGSGL 1218
Score = 63 (27.2 bits), Expect = 4.4e-42, Sum P(4) = 4.4e-42
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1204
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 851 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 910
Query: 1205 VLDSGALSLDKVFELIAEGENLPVYL 1230
+ SL+ + + E E +P YL
Sbjct: 911 LKARPRHSLNSLATAVKEIEEIPAYL 936
Score = 62 (26.9 bits), Expect = 1.8e-44, Sum P(4) = 1.8e-44
Identities = 17/95 (17%), Positives = 46/95 (48%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P + L++ + AR +Q++ A L ++ L+ L +R +P+ +
Sbjct: 930 EEIPAYLPNGVALKDSVQRARDWLQDVEA-LQVGGRVPVLDTLIELVTRGRSIPVHLNSL 988
Query: 407 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 440
+L ++ + W++ + ++ P ++ ++VL
Sbjct: 989 PRLELLVAEVQAWKECAANTFLTENSPYSL-LEVL 1022
Score = 60 (26.2 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
++W + ++ LD +L+LD + LI G L Y E R + +L + +D+K
Sbjct: 849 ARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 906
Query: 1255 A 1255
A
Sbjct: 907 A 907
Score = 58 (25.5 bits), Expect = 1.9e-43, Sum P(5) = 1.9e-43
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 771 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSF 830
Query: 446 EALDLKIDVPETDMLLKMIGQA---ESCRARCSEALRGSMSLKTVELLLQELG 495
E D +++P+ + + QA E + C + S++L + L+ +LG
Sbjct: 831 E-FD--VELPQLAEMRTRLEQARWLEEVQQACLDP--SSLTLDDMRRLI-DLG 877
Score = 56 (24.8 bits), Expect = 7.8e-45, Sum P(3) = 7.8e-45
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1039
C + + E++++ C +C +H C+ + + E YIC C ++ S
Sbjct: 1424 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRCTVKDAPS 1474
Score = 55 (24.4 bits), Expect = 3.8e-43, Sum P(5) = 3.8e-43
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 732
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 769 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 814
Score = 55 (24.4 bits), Expect = 2.7e-39, Sum P(4) = 2.7e-39
Identities = 45/190 (23%), Positives = 75/190 (39%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 1042 EPLPSGKKKSTKLESLSDLERALSESKETA-SAMATLGEARLREMEA-------LQSFRL 1093
Query: 410 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 467
+ +D ++ C+ K PAA I +L +A + VP + I
Sbjct: 1094 ANEGKLLSPVQDVELKVCLCQKAPAAPMIQC--ELCRDAFHTSCVVVPSISQGPR-IWLC 1150
Query: 468 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1151 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1204
Query: 528 INGRKDQHNV 537
N R Q V
Sbjct: 1205 GNLRSVQDRV 1214
Score = 48 (22.0 bits), Expect = 1.7e-39, Sum P(4) = 1.7e-39
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 1213 LDKVFELIAEGENLPVYL 1230
LD + EL+ G ++PV+L
Sbjct: 968 LDTLIELVTRGRSIPVHL 985
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(5) = 0.00082
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 420 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 457
R SV+ S CP A ++ +EA+++KI+ ET
Sbjct: 148 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEET 180
Score = 41 (19.5 bits), Expect = 3.2e-46, Sum P(4) = 3.2e-46
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGT----SVGDKNSLLGLLQKIKQSVHRSLYIYNK-- 977
PE + + +++ NW+ R ++++ + SV D+ GL Q+ + NK
Sbjct: 1179 PEGDALRYMIERTVNWQHRAQQLLSSGNLRSVQDRVGS-GLWYSRWQASAGQVSETNKVS 1237
Query: 978 -PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYI 1028
P G+ S +L +S + + S + C L + P EV+ EA +
Sbjct: 1238 QPTGTTSFSLPDDWDSRASYVHSPFSSG-RSCIPLHGVSP-EVNELLMEAQL 1287
Score = 39 (18.8 bits), Expect = 5.1e-46, Sum P(5) = 5.1e-46
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 789 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHGVKWLK--RALEV 843
HW KA S L P SL + + + E + + + L +S+ WL+ AL+V
Sbjct: 902 HWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGVALKDSVQRARDWLQDVEALQV 961
Score = 38 (18.4 bits), Expect = 5.6e-42, Sum P(4) = 5.6e-42
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 675 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 718
Score = 38 (18.4 bits), Expect = 2.1e-41, Sum P(5) = 2.1e-41
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 669 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 727
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 728 LLRHL-RLVT--QDAEKC 742
Score = 38 (18.4 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 46/219 (21%), Positives = 89/219 (40%)
Query: 362 LQNY--AEEARSL--IQEINAALSACSKISELELLYS---RASGLPICIVESEKLSQRIS 414
LQ++ A E + L +Q++ + C K ++ R + C+V +SQ
Sbjct: 1088 LQSFRLANEGKLLSPVQDVELKVCLCQKAPAAPMIQCELCRDAFHTSCVVVPS-ISQ--- 1143
Query: 415 SAKVWR-DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRAR 473
++W R+ S K P + +L L+ +++ +PE D L MI + + + R
Sbjct: 1144 GPRIWLCPHCRR--SEKPPLEKILPLLASLQR----IRVRLPEGDALRYMIERTVNWQHR 1197
Query: 474 CSEALRGSMSLKTVE------LLLQELGDFTVNMPELELLKQYHSDAIF-----WIARLN 522
+ L S +L++V+ L + E + Q F W +R +
Sbjct: 1198 AQQLL-SSGNLRSVQDRVGSGLWYSRWQASAGQVSETNKVSQPTGTTSFSLPDDWDSRAS 1256
Query: 523 DILVNIN-GRK--DQHNVIDELNCILKEGASLRIQVDDL 558
+ + GR H V E+N +L E L++ + ++
Sbjct: 1257 YVHSPFSSGRSCIPLHGVSPEVNELLMEAQLLQVSLPEI 1295
Score = 37 (18.1 bits), Expect = 2.7e-39, Sum P(4) = 2.7e-39
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 692 LKDLVSQSKFLKISLKEQTELEKVI 716
+ +L+ +++ L++SL E EL + +
Sbjct: 1278 VNELLMEAQLLQVSLPEIQELYQTL 1302
Score = 37 (18.1 bits), Expect = 2.8e-39, Sum P(5) = 2.8e-39
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 638 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 675
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1167 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1204
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 436 (158.5 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 93/213 (43%), Positives = 132/213 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 542 MKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 601
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 602 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHK 661
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 662 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 716
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P VCL H LC+C + + +L YR+TL EL
Sbjct: 717 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 749
Score = 169 (64.5 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 71/277 (25%), Positives = 130/277 (46%)
Query: 317 IRDCLHKAENW-SSLPGSDS-EKVRLDC----VNELL----GFDPLPCNEPGHLI--LQN 364
+R+C+H+AE S + G S ++ R+ + EL LPC H I ++
Sbjct: 808 LRNCMHEAEACVSQVLGLVSGQEARIQTSPLTLTELRVLLEQMSSLPCAM--HQIEDVKE 865
Query: 365 YAEEARSLIQEINAAL-SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSV 423
E+ + E AL S C + + L + L + + E+ +L Q++ A+ W D V
Sbjct: 866 VLEQVEAYQIEAREALASLCPSVGLMRSLLEKGQQLGVDVPEAHQLQQQVEQAR-WLDDV 924
Query: 424 RKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKMIGQAESCRARCSEAL 478
+K ++ + I +L A +D ++ LL + + E C EA
Sbjct: 925 KKALAPSAQRGSLVIMQGLLVTGTKIASSPCVDKARAELQELLTIAERWEEKAHFCLEA- 983
Query: 479 RGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVI 538
R T+E +++E + V++P ++ LK + A WIA +++I NG D + +
Sbjct: 984 RQKHPPATLEAIIREAENIPVHLPNIQALKDALAKAQAWIADVDEIQ---NG--DHYPCL 1038
Query: 539 DELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKA 574
D+L C++ G L + +++L +E+++ AH REKA
Sbjct: 1039 DDLECLVAVGRDLPVSLEELRQLELQVLTAHSWREKA 1075
Score = 154 (59.3 bits), Expect = 5.0e-48, Sum P(3) = 5.0e-48
Identities = 86/379 (22%), Positives = 164/379 (43%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 724 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKIRAESFDTWANKVRVALEVEDG 779
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS-LKTVE 488
+ L LESEA + + P +++L ++ + +AE+C ++ + G + ++T
Sbjct: 780 RKRSFEELRALESEARERRF--PNSELLQRLRNCMHEAEACVSQVLGLVSGQEARIQTSP 837
Query: 489 LLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV---IDELNCIL 545
L L EL M L D + ++ I R+ ++ + + +L
Sbjct: 838 LTLTELRVLLEQMSSLPCAMHQIEDVKEVLEQVE--AYQIEAREALASLCPSVGLMRSLL 895
Query: 546 KEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQIE 600
++G L + V + ++ ++++A + KAL + L ++ VT +
Sbjct: 896 EKGQQLGVDVPEAHQLQQQVEQARWLDDVKKALAPSAQRGSLVIMQGLLVTGTKIASSPC 955
Query: 601 REKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNE 658
+K +L +L A RWEE+A L K E IIR +++I V LP++ +++
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIREAENIPVHLPNIQALKDA 1015
Query: 659 ISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVIN 717
++ A++W+ + E+ + P C L+ L+ LV+ + L +SL+E +LE +
Sbjct: 1016 LAKAQAWIADVDEIQNGDHY---P--C----LDDLECLVAVGRDLPVSLEELRQLELQVL 1066
Query: 718 NCERWQNHASSL-LQDARC 735
W+ AS + L+ C
Sbjct: 1067 TAHSWREKASRMFLKKNSC 1085
Score = 79 (32.9 bits), Expect = 3.3e-40, Sum P(3) = 3.3e-40
Identities = 50/196 (25%), Positives = 83/196 (42%)
Query: 1055 SDLRMLIELLSDSEFFCRGIE-AKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1113
++LR+L+E +S IE K+VL++V +E + L + S L + L
Sbjct: 841 TELRVLLEQMSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCP--SVGLMRSL---- 894
Query: 1114 NKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLE-GLTKPTIGQIQNYLKEG 1172
L+ + GV D L + + W V K L + ++ +Q L G
Sbjct: 895 ------LEKGQQLGV-DVPEAHQLQQQVEQARWLDDVKKALAPSAQRGSLVIMQGLLVTG 947
Query: 1173 LLMNISP-KDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAEGENLPVYL 1230
+ SP D R +L EL I +W + A L++ E +I E EN+PV+L
Sbjct: 948 TKIASSPCVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIREAENIPVHL 1006
Query: 1231 E--KELKSLRARSMLY 1244
+ LK A++ +
Sbjct: 1007 PNIQALKDALAKAQAW 1022
Score = 73 (30.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 87/440 (19%), Positives = 172/440 (39%)
Query: 649 LPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKE 708
+ SL ++I K L+ E + A + C + L ++ L+ + + L + + E
Sbjct: 850 MSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCPSVGL--MRSLLEKGQQLGVDVPE 907
Query: 709 QTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAAN-C 767
+L++ + RW L D + L SLV L+T + A++ C
Sbjct: 908 AHQLQQQVEQA-RW-------LDDVKKALAPS----AQRGSLVIMQGLLVTGTKIASSPC 955
Query: 768 GLSLGFDFHEISELQNACST-LHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFS-SM 825
+ E+ + H+C +A P+ +E+++ AE + +
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQ--KHPPAT--LEAIIREAENIPVHLPNIQA 1011
Query: 826 LWNSLIHGVKWLKRALEVISA---PCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTS- 881
L ++L W+ E+ + PC L D+E ++A + PV + EL
Sbjct: 1012 LKDALAKAQAWIADVDEIQNGDHYPC------LDDLECLVA----VGRDLPVSLEELRQL 1061
Query: 882 ---AIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE---LEKVL----S 931
+ H W+E+ + F LK ++L+ L A + +EK L S
Sbjct: 1062 ELQVLTAHS-WREKASRMF-LK-KNSCYTLLEVLCPCAHAGSDSSKRRRWIEKELRLYRS 1118
Query: 932 KVD------KVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMT 985
D ++ + IV G++ G+LQ + + + + + S + +
Sbjct: 1119 CTDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSTTASSATS 1178
Query: 986 LCMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFG 1044
+C+C + + + L C C+D +H QC+ P + + P ++E ++ +F
Sbjct: 1179 ICVCGKVPAG-VGTLQCDLCQDWFHGQCVSVPHILSSSRPSPTSSPLLAWWEWDT--KFL 1235
Query: 1045 GSPLRFGGKRSDLRMLIELL 1064
PL +R L ++ LL
Sbjct: 1236 -CPLCMRSRRPRLETILALL 1254
Score = 72 (30.4 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 29/146 (19%), Positives = 61/146 (41%)
Query: 297 MDAVRDMVNKLIE-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCN 355
+D R + +L+ RW E CL + P + E + + N +P +
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQKH---PPATLEAIIREAEN-------IPVH 1005
Query: 356 EPGHLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRI 413
P L++ +A++ I +++ + + +LE L + LP+ + E +L ++
Sbjct: 1006 LPNIQALKDALAKAQAWIADVDEIQNGDHYPCLDDLECLVAVGRDLPVSLEELRQLELQV 1065
Query: 414 SSAKVWRDSVRKCI--SNKCPAAIEI 437
+A WR+ + N C +E+
Sbjct: 1066 LTAHSWREKASRMFLKKNSCYTLLEV 1091
Score = 63 (27.2 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQAEES 1292
C+C K + C C +W+H CV S P +I ++ +P S
Sbjct: 1180 CVCGKVPAGVGTLQCDLCQDWFHGQCV---SVP--HILSSSRPSPTSS 1222
Score = 53 (23.7 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 49/215 (22%), Positives = 81/215 (37%)
Query: 320 CLHKAENWSSLPGSDSEKVRL--DCVN-ELLGFDPLPCNEPGHLIL---QNYAEEARSLI 373
C H + S +++RL C + ELLG +PG +I+ + +E ++
Sbjct: 1095 CAHAGSDSSKRRRWIEKELRLYRSCTDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGIL 1154
Query: 374 QEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPA 433
Q + SA K S L + +S IC+ K+ + + + D + +C
Sbjct: 1155 Q-LRRTNSA--KPSPLASSTTASSATSICVCG--KVPAGVGTLQC--DLCQDWFHGQC-- 1205
Query: 434 AIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVELLLQ 492
+ V + L S P + LL + C +R L+T+ LL
Sbjct: 1206 ---VSVPHILSSSRPS-----PTSSPLLAW--WEWDTKFLCPLCMRSRRPRLETILALLV 1255
Query: 493 ELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L V +PE E L+ AI W R L +
Sbjct: 1256 ALQRLPVRLPEGEALQCLTERAIVWQGRARQALAS 1290
Score = 47 (21.6 bits), Expect = 6.9e-37, Sum P(3) = 6.9e-37
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1038 LDDLECLVAVGRDLPVSLE-ELRQL 1061
Score = 47 (21.6 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 399 LPICIVESEKLSQRISSAKVWRDSVRKCISNK 430
LP+ + E E L A VW+ R+ +++K
Sbjct: 1260 LPVRLPEGEALQCLTERAIVWQGRARQALASK 1291
Score = 41 (19.5 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 737
RLE++ L+ + L + L E L+ + WQ A L +D LL
Sbjct: 1246 RLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASKDVTTLL 1297
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 435 (158.2 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 93/213 (43%), Positives = 132/213 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 548 MKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 607
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 608 YNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHK 667
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 668 EMFIMVQEERRLRKTLLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 722
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P + VCL H LC+C + +L YR+TL EL
Sbjct: 723 CPDSLVCLSHINDLCKCSRNRQYLRYRYTLDEL 755
Score = 169 (64.5 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 87/382 (22%), Positives = 170/382 (44%)
Query: 373 IQEINAALSACSKISE-LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKC 431
+ IN L CS+ + L Y+ LP + +KL R S W + V+ + +
Sbjct: 730 LSHIND-LCKCSRNRQYLRYRYT-LDELPAML---QKLKIRAESFDNWANKVQAALEVED 784
Query: 432 PAAIEIDVLYKLESEALDLKIDVPET-DMLLKMIGQAESCRARCSEALRGS--------M 482
+ L LESEA D + E L K + +AE+C ++ + S +
Sbjct: 785 GRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQI 844
Query: 483 SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELN 542
+L ++LLL+++G M +++ +K + + L ++ ++ ++ L
Sbjct: 845 TLTELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTSL-----PYS-LEILQ 898
Query: 543 CILKEGASLRIQVDDLPLVEVELKKAHCREK---ALKACDTKMPLDFIRQ--VTAEAVIL 597
++++G LR++V + +E L++A ++ AL + L +++ V V
Sbjct: 899 SLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMGTKVAS 958
Query: 598 QIEREKLFIDLSGVLAAAMRWEERAADIL--IHKAQMCEFEDIIRASQDIFVVLPSLDEV 655
K +L +L A WEE+A L K E IIR +++I V LP++ +
Sbjct: 959 SPSVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSL 1018
Query: 656 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 714
+ ++ A++W+ + +E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1019 KEALTKAQAWIADVNEIQNGDHY---P--C----LDDLEGLVAVGRDLPVELEELRQLEN 1069
Query: 715 VINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1070 QVLTAHSWKEKASKTFLKKNSC 1091
Score = 139 (54.0 bits), Expect = 3.8e-46, Sum P(3) = 3.8e-46
Identities = 56/234 (23%), Positives = 117/234 (50%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSACSKISE-LELLYSRASGLPICIVESEK 408
LPC H I +++ ++ S E AL++ E L+ L + L + + E+ +
Sbjct: 859 LPCTM--HQIDEVKDVLQQVESYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQ 916
Query: 409 LSQRISSAKVWRDSVRKCI--SNKCPAAIEIDVLYKLESE-ALDLKIDVPETDMLLKMIG 465
L + + A+ W D V++ + S + + + + L + ++ A ++ + L +++
Sbjct: 917 LEELLEQAQ-WLDQVKQALAPSGQRHSLVIMKKLLVMGTKVASSPSVNKARAE-LQELLT 974
Query: 466 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
AE + L+ S S T+E++++E + V +P ++ LK+ + A WIA +N+
Sbjct: 975 IAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNE 1034
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L +++++L +E ++ AH +EKA K
Sbjct: 1035 IQ---NG--DHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASK 1083
Score = 115 (45.5 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 70/298 (23%), Positives = 126/298 (42%)
Query: 407 EKLSQRISSAKVWRDSVRKCISN-----KCPAAIEIDVLYKLESEALDLKIDVPETDMLL 461
++L + ++ A+ V ISN + P I + L L + L + + D +
Sbjct: 812 QRLKKCLTEAEACISQVLGLISNSEDRLQTPQ-ITLTELQLLLKQMGTLPCTMHQIDEVK 870
Query: 462 KMIGQAESCRARCSEALRG-SMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 520
++ Q ES + EAL SL+ ++ L+++ V +PE L++ A W+ +
Sbjct: 871 DVLQQVESYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQ-WLDQ 929
Query: 521 LNDILVNINGRKDQHNVIDELNCI-LKEGASLRIQVDDLPLVEVELKKAHC-REKA---L 575
+ L +G++ ++ +L + K +S + L E+ L A C EKA L
Sbjct: 930 VKQALAP-SGQRHSLVIMKKLLVMGTKVASSPSVNKARAELQEL-LTIAECWEEKAHFCL 987
Query: 576 KACDTKMPLDFIRQVTAEAVILQIEREKLFI----DLSGVLAAAMRWEERAADILIHKAQ 631
KA P T E +I + E +++ L L A W +I
Sbjct: 988 KASQKHSP------ATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHY 1041
Query: 632 MC--EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWL-KNSELFLA--SAFAVAPASC 684
C + E ++ +D+ V L L +++N++ TA SW K S+ FL S + + C
Sbjct: 1042 PCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLC 1099
Score = 73 (30.8 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 98/495 (19%), Positives = 195/495 (39%)
Query: 552 RIQVDDLPLVEVELKK--------AHCREKALKACD-TKMPLDFIRQVTAEAVILQIERE 602
R +D+LP + +LK A+ + AL+ D K + +R + +EA +
Sbjct: 749 RYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNS 808
Query: 603 KLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDI-IRASQDIFVVLPSLDEVQNEIST 661
+L L L A + ++ + + I + Q + + +L ++I
Sbjct: 809 ELLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQITLTELQLLLKQMGTLPCTMHQIDE 868
Query: 662 AKSWLKNSELFLASAFAVAPASCSL-LRLESLKDLVSQSKFLKISLKEQTELEKVINNCE 720
K L+ E + A SL LE L+ L+ + + L++ + E +LE+++ +
Sbjct: 869 VKDVLQQVESY---QIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQ 925
Query: 721 RWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLG-FDFHEIS 779
W + L + G +SLV + L+ + A++ ++ + E+
Sbjct: 926 -WLDQVKQALAPS-----------GQRHSLVIMKKLLVMGTKVASSPSVNKARAELQELL 973
Query: 780 ELQNACST-LHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWL 837
+ H+C KA SP+ +E ++ AE + + L +L W+
Sbjct: 974 TIAECWEEKAHFCLKASQ--KHSPAT--LEVIIREAENIPVYLPNIQSLKEALTKAQAWI 1029
Query: 838 KRALEVISA---PCKFKRCKLSDVEEVLAGCKGINFSFPVVIGEL----TSAIQKHKLWQ 890
E+ + PC L D+E ++A + PV + EL + H W+
Sbjct: 1030 ADVNEIQNGDHYPC------LDDLEGLVA----VGRDLPVELEELRQLENQVLTAHS-WK 1078
Query: 891 EQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS 950
E+ + F LK ++L+ L +A + + + K + + +
Sbjct: 1079 EKASKTF-LK-KNSCYTLLEVLCPCADAGSVSTKR-SRWIEKEMGLYKYDTELLGLSAQD 1135
Query: 951 VGDKNSLLGLL----QKIKQSVHRSLYIYN-KPHG-SVSM-----TLCMCCESDSKELEF 999
+ D S++ +K K+ + +I + KP S SM ++C+C + + +E
Sbjct: 1136 LRDPGSVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNASATSICICGQVCAG-VES 1194
Query: 1000 LICSACKDCYHLQCL 1014
L C C D +H QC+
Sbjct: 1195 LQCDLCHDWFHGQCV 1209
Score = 71 (30.1 bits), Expect = 4.6e-39, Sum P(3) = 4.6e-39
Identities = 45/187 (24%), Positives = 84/187 (44%)
Query: 1055 SDLRMLIELLSDSEFFCRGI-EAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1113
++L++L++ + I E KDVLQ+V +E + LT L L ++
Sbjct: 847 TELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTS--------LPYSLEILQ 898
Query: 1114 NKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGL-TKPTIGQIQNYLKEG 1172
+ + K ++ V +++ L+ L + W +V + L + ++ ++ L G
Sbjct: 899 SLME---KGQQLR-VEVPEAHQ-LEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMG 953
Query: 1173 LLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLE 1231
+ SP + R +L EL I W + A + S S + +I E EN+PVYL
Sbjct: 954 TKVASSPSVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLP 1013
Query: 1232 KELKSLR 1238
++SL+
Sbjct: 1014 N-IQSLK 1019
Score = 63 (27.2 bits), Expect = 3.2e-38, Sum P(3) = 3.2e-38
Identities = 38/188 (20%), Positives = 78/188 (41%)
Query: 256 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRW 313
+ +L+EQ WL +V Q L S +L+ ++ L G ++ A VNK +
Sbjct: 917 LEELLEQAQWLD---QVKQALAPSGQRHSLVI-MKKLLVMGTKV-ASSPSVNKARAELQE 971
Query: 314 AEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLI 373
I +C + ++ L+ + + + +P P L+ +A++ I
Sbjct: 972 LLTIAECWEEKAHFCLKASQKHSPATLEVI--IREAENIPVYLPNIQSLKEALTKAQAWI 1029
Query: 374 QEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCI--SN 429
++N + + +LE L + LP+ + E +L ++ +A W++ K N
Sbjct: 1030 ADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKN 1089
Query: 430 KCPAAIEI 437
C +E+
Sbjct: 1090 SCYTLLEV 1097
Score = 61 (26.5 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1236 SLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV 1271
S+ A + CIC + + C C +W+H CV
Sbjct: 1174 SMNASATSICICGQVCAGVESLQCDLCHDWFHGQCV 1209
Score = 50 (22.7 bits), Expect = 7.1e-37, Sum P(3) = 7.1e-37
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 1185 QKLMELNRIGSQW-ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1237
Q L E W ADV ++ LD + L+A G +LPV LE EL+ L
Sbjct: 1016 QSLKEALTKAQAWIADV-NEIQNGDHYPCLDDLEGLVAVGRDLPVELE-ELRQL 1067
Score = 49 (22.3 bits), Expect = 2.6e-36, Sum P(4) = 2.6e-36
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L +V +PE E L+ AI W R L +
Sbjct: 1250 LETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALAS 1293
Score = 46 (21.3 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 737
RLE++ L+ + L + L E L+ + WQ A L +D LL
Sbjct: 1249 RLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALL 1300
Score = 41 (19.5 bits), Expect = 4.7e-44, Sum P(3) = 4.7e-44
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 641 ASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSK 700
AS+D+ +L L++ + ++ K L S FA C L S KD++ + +
Sbjct: 1292 ASEDVTALLKQLEKSRQQLQDELRHKKPPTL--PSGFAF---DC--LTENSGKDILKEEE 1344
Query: 701 FLKISLKEQTELEKVI---NNCERWQNHASSLL 730
L ++ + EK++ ++C+ + SLL
Sbjct: 1345 ELVLNEERIKSSEKIVPKESSCKGDKELLPSLL 1377
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 443 (161.0 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 90/216 (41%), Positives = 133/216 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 474 MKKLAPELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 533
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 534 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 593
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C C
Sbjct: 594 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSALSCCC 648
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K L YR+TL +LY +
Sbjct: 649 KPGLLVCLHHVQELCSCPPYKYKLRYRYTLDDLYPM 684
Score = 137 (53.3 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 74/341 (21%), Positives = 146/341 (42%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 688 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 745
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHS--DAIFWIARLN 522
AE C + + L G + + TVN EL + + Q H+ + L
Sbjct: 746 DAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVN--ELRQFVTQLHALPCVLSQTPLLK 803
Query: 523 DILVNINGRKDQHNV---------IDELNCILKEGASLRIQVDDLPLVEVELKKAHCREK 573
D+L + + QH+ EL +L +++ L + V L++AH E+
Sbjct: 804 DLLNRVEDFQ-QHSQKLLSEEMPSASELQDLLDVSFEFDVELPQLAEMRVRLEQAHWLEE 862
Query: 574 ALKAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHK 629
+AC D + + LD +R++ V L EK L +L + W+++A +L +
Sbjct: 863 VQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKAR 922
Query: 630 AQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLL 687
+ + +++ ++I LP+ +++ + A+ WL+ E A P
Sbjct: 923 PRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDWLQEVEALQAGGRV--PV----- 975
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS 728
L++L +LV++ + + + L LE ++ W+ A++
Sbjct: 976 -LDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAAN 1015
Score = 102 (41.0 bits), Expect = 3.5e-46, Sum P(4) = 3.5e-46
Identities = 56/268 (20%), Positives = 110/268 (41%)
Query: 789 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 845
HW KA S L P SL + +++ E + + + L +S+ WL+ +E +
Sbjct: 910 HWDDKAKSLLKARPRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDWLQE-VEALQ 968
Query: 846 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS 905
A + L + E++ + I P + L S + + +W+E F K S
Sbjct: 969 AGGRVP--VLDTLVELVTRGRCIPVHLPS-LPRLESLVAEVHVWKECAANTFLTK--NSS 1023
Query: 906 WSLM-----------LQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS---- 950
+SL+ L LK P +K +V+ + + ++ E T+
Sbjct: 1024 YSLLEVLCPRCDIGLLGLKRKQRKLKDPLPSGKKKSPRVESLSDLERTLMESRETASAMA 1083
Query: 951 -VGDKNSL-LGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDC 1008
+G+ + + LQ ++Q+ L P V M +C+C ++ + + + C C+D
Sbjct: 1084 ALGEARAREMEALQSLRQANEEKLL---SPVHDVEMRVCVCQKAPAAPM--VQCELCRDA 1138
Query: 1009 YHLQCLRPTEVDRNHAEAYICPYCQYFE 1036
+H C+ + + ++CP C+ E
Sbjct: 1139 FHTSCVAAPSIPQG-PRVWLCPNCRRSE 1165
Score = 98 (39.6 bits), Expect = 0.00080, Sum P(4) = 0.00080
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 977 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1036
K +V + +C+ C S S E L+C C D YH CL P D + + CP C E
Sbjct: 242 KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 300
Query: 1037 -SESVSQFG 1044
S+ FG
Sbjct: 301 CSKPQEAFG 309
Score = 80 (33.2 bits), Expect = 7.1e-49, Sum P(3) = 7.1e-49
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1231 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYICAACK 1286
EK L + M C+C+K M+ C C + +H CV S P+ +++C C+
Sbjct: 1105 EKLLSPVHDVEMRVCVCQKA-PAAPMVQCELCRDAFHTSCVAAPSIPQGPRVWLCPNCR 1162
Score = 78 (32.5 bits), Expect = 1.1e-42, Sum P(4) = 1.1e-42
Identities = 43/222 (19%), Positives = 94/222 (42%)
Query: 317 IRDCLHKAENWSSLPGSDSEKVRLDCVNELLG----FDPLPCNEPGHLILQNYAEEARSL 372
+++ L +E+W S + +N L + +P + P L++ + AR
Sbjct: 901 LQELLTVSEHWDDKAKSLLKARPRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDW 960
Query: 373 IQEINAALSACSKISELELLY---SRASGLPICIVESEKLSQRISSAKVWRDSVRKCISN 429
+QE+ A L A ++ L+ L +R +P+ + +L ++ VW++
Sbjct: 961 LQEVEA-LQAGGRVPVLDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAANTFLT 1019
Query: 430 KCPAAIEIDVLY-KLESEALDLKIDVPETDMLLKMIGQAESCRARC-SEALRGSMSLKTV 487
K + ++VL + + L LK + L G+ +S R S+ R M +
Sbjct: 1020 KNSSYSLLEVLCPRCDIGLLGLKRKQRKLKDPLPS-GKKKSPRVESLSDLERTLMESRET 1078
Query: 488 ELLLQELGDFTVN-MPELELLKQYHSDAIFWIARLNDILVNI 528
+ LG+ M L+ L+Q + + + ++ ++D+ + +
Sbjct: 1079 ASAMAALGEARAREMEALQSLRQANEEKL--LSPVHDVEMRV 1118
Score = 77 (32.2 bits), Expect = 3.5e-46, Sum P(4) = 3.5e-46
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 693
E +D++ S + V LP L E++ + A WL+ E+ A + P+S +L + L
Sbjct: 829 ELQDLLDVSFEFDVELPQLAEMRVRLEQAH-WLE--EVQQA---CLDPSSLTLDDMRRLI 882
Query: 694 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
DL V + + + K L++++ E W + A SLL+
Sbjct: 883 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 920
Score = 69 (29.3 bits), Expect = 9.8e-42, Sum P(4) = 9.8e-42
Identities = 45/264 (17%), Positives = 113/264 (42%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 779 VNELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSASELQDLLDVSF 838
Query: 446 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL 504
E D+++ + E + L+ E + C + S++L + L+ +LG +
Sbjct: 839 E-FDVELPQLAEMRVRLEQAHWLEEVQQACLDP--SSLTLDDMRRLI-DLGVGLAPYSAV 894
Query: 505 ELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVE 564
E + + +D ++ + +H+ ++ L ++KE + + + ++
Sbjct: 895 EKAMARLQELLTVSEHWDDKAKSLLKARPRHS-LNSLAAVVKEIEEIPAHLPNGAALKDS 953
Query: 565 LKKAH--CRE-KALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEER 621
+++A +E +AL+A LD + ++ + + L L ++A W+E
Sbjct: 954 VQRARDWLQEVEALQAGGRVPVLDTLVELVTRGRCIPVHLPSL-PRLESLVAEVHVWKEC 1012
Query: 622 AADILIHKAQMCEFEDIIRASQDI 645
AA+ + K +++ DI
Sbjct: 1013 AANTFLTKNSSYSLLEVLCPRCDI 1036
Score = 67 (28.6 bits), Expect = 1.1e-42, Sum P(4) = 1.1e-42
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1169 LEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLLSSGHLKSLQDPVGSGL 1226
Score = 60 (26.2 bits), Expect = 3.5e-46, Sum P(4) = 3.5e-46
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1247 CRKPY-DEKAMIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1285
C +P DE + C C W+H CV + + E Y+C C
Sbjct: 1432 CLQPEGDEVDWVQCDGSCSRWFHQVCVGVSPETAEEEDYVCVRC 1475
Score = 60 (26.2 bits), Expect = 2.0e-44, Sum P(4) = 2.0e-44
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
L + L+ V+Q L L + L+ ++N E +Q H+ LL + + ++ D L
Sbjct: 777 LTVNELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEE--MPSASELQDLL 834
Query: 747 SNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNAC 785
S +E + A + L H + E+Q AC
Sbjct: 835 DVSFEFDVE-----LPQLAEMRVRLE-QAHWLEEVQQAC 867
Score = 60 (26.2 bits), Expect = 3.8e-42, Sum P(4) = 3.8e-42
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1204
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 859 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 918
Query: 1205 VLDSGALSLDKVFELIAEGENLPVYL 1230
+ SL+ + ++ E E +P +L
Sbjct: 919 LKARPRHSLNSLAAVVKEIEEIPAHL 944
Score = 59 (25.8 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
+ W + ++ LD +L+LD + LI G L Y E R + +L + +D+K
Sbjct: 857 AHWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 914
Query: 1255 A 1255
A
Sbjct: 915 A 915
Score = 52 (23.4 bits), Expect = 7.7e-45, Sum P(4) = 7.7e-45
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + E++++ C +C +H C+ + + E Y+C C
Sbjct: 1432 CLQPEGDEVDWVQCDGSCSRWFHQVCVGVSP-ETAEEEDYVCVRC 1475
Score = 48 (22.0 bits), Expect = 3.4e-37, Sum P(4) = 3.4e-37
Identities = 38/177 (21%), Positives = 68/177 (38%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
DPLP + +++ ++ R+L++ A SA + + E A + EKL
Sbjct: 1050 DPLPSGKKKSPRVESLSDLERTLMESRETA-SAMAALGEARAREMEALQ-SLRQANEEKL 1107
Query: 410 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 468
+ ++ R C+ K PAA + +L +A + P + +
Sbjct: 1108 LSPVHDVEM-----RVCVCQKAPAAPMVQC--ELCRDAFHTSCVAAPSIPQGPR-VWLCP 1159
Query: 469 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 525
+CR SE L+ + LL L V +PE + L+ + W R +L
Sbjct: 1160 NCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLL 1210
Score = 47 (21.6 bits), Expect = 1.7e-40, Sum P(4) = 1.7e-40
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 1213 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC 1247
LD + EL+ G +PV+L L+SL A ++ C
Sbjct: 976 LDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKEC 1012
Score = 44 (20.5 bits), Expect = 2.7e-40, Sum P(4) = 2.7e-40
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 716
S W N +L S F+ + L + + +L+ +++ L++SL E EL + +
Sbjct: 1254 SLPDDW-DNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTL 1310
Score = 42 (19.8 bits), Expect = 6.8e-37, Sum P(3) = 6.8e-37
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 450 LKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVE------LLLQELGDFTVNMPE 503
+++ +PE D L MI + S + R + L S LK+++ LL +PE
Sbjct: 1182 IRVRLPEGDALRYMIERTVSWQHRARQLL-SSGHLKSLQDPVGSGLLCGRWQATAGQVPE 1240
Query: 504 LELLKQYHSDAIF-----WIARLNDILVNIN-GRK--DQHNVIDELNCILKEGASLRIQV 555
+ Q F W R + + + GR H + E+N +L E L++ +
Sbjct: 1241 TSKMSQPPGPTSFSLPDDWDNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSL 1300
Query: 556 DDLP-LVEVELKKAHCREKA 574
++ L + L K ++A
Sbjct: 1301 PEIQELYQTLLAKPSPAQQA 1320
Score = 40 (19.1 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 420 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 457
R SV+ + CP A ++ +EA+++KI+ ET
Sbjct: 156 RQSVQP--AETCPPARRAK---RMRAEAMNIKIEPEET 188
Score = 40 (19.1 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 531 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 586
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 112 RGHYERILNPYNLFLS-GDSLRCLQKPNLSTDTKDKEYKPHGIPQRQSVQPAETCPPARR 170
Query: 587 IRQVTAEAVILQIEREK 603
+++ AEA+ ++IE E+
Sbjct: 171 AKRMRAEAMNIKIEPEE 187
Score = 38 (18.4 bits), Expect = 3.8e-42, Sum P(4) = 3.8e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 677 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 735
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 736 LLRHL-RLVT--QDAEKC 750
Score = 38 (18.4 bits), Expect = 7.1e-40, Sum P(4) = 7.1e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 683 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 726
Score = 38 (18.4 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 638 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 675
++ + Q I V LP D ++ I SW + L+S
Sbjct: 1175 LLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLLSS 1212
Score = 37 (18.1 bits), Expect = 1.2e-45, Sum P(4) = 1.2e-45
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSL 957
PE + + +++ +W+ R ++++ S G SL
Sbjct: 1187 PEGDALRYMIERTVSWQHRARQLL--SSGHLKSL 1218
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 448 (162.8 bits), Expect = 9.4e-49, Sum P(3) = 9.4e-49
Identities = 92/216 (42%), Positives = 134/216 (62%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN G
Sbjct: 497 MKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQG 556
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ +++
Sbjct: 557 FNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQK 616
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+M RE++ + G+ S + P+ ++ C C+ ++SAV C C
Sbjct: 617 DMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKTTCFMSAVYCPC 671
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 672 KPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 707
Score = 130 (50.8 bits), Expect = 9.4e-49, Sum P(3) = 9.4e-49
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 711 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 768
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 769 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 828
Query: 525 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 576
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 829 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 888
Query: 577 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 631
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 889 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 948
Query: 632 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 949 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1000
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 743
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1001 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1060
Query: 744 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 801
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1061 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1113
Query: 802 PSLEDVESLMAVAEG 816
+E + SL A EG
Sbjct: 1114 KEMEALRSLRAANEG 1128
Score = 102 (41.0 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 977 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 265 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 319
Score = 81 (33.6 bits), Expect = 9.4e-49, Sum P(3) = 9.4e-49
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1185 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1242
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1086 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1141
Query: 1243 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1286
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1142 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1185
Score = 80 (33.2 bits), Expect = 4.0e-45, Sum P(4) = 4.0e-45
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 802 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 859
Query: 446 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 501
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 860 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 918
Query: 502 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 555
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 919 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 977
Query: 556 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 613
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 978 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1027
Query: 614 AAMRWEERAADILI 627
W+E AA+ +
Sbjct: 1028 EVQAWKECAANTFL 1041
Score = 76 (31.8 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 689 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 747
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 739 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 797
Query: 748 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 807
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 798 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 853
Query: 808 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 867
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 854 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 910
Query: 868 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 924
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 911 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 968
Query: 925 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 963
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 969 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1008
Score = 72 (30.4 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1247 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1285
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1458 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1501
Score = 72 (30.4 bits), Expect = 4.0e-45, Sum P(4) = 4.0e-45
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1192 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1249
Score = 65 (27.9 bits), Expect = 4.0e-38, Sum P(3) = 4.0e-38
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1142 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1199
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 938 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 985
Query: 1200 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1249
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 986 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1045
Query: 1250 PYDEKAMIACYQCD 1263
PY ++ C +CD
Sbjct: 1046 PYSLLEVL-CPRCD 1058
Score = 63 (27.2 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 923 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 967
Score = 59 (25.8 bits), Expect = 8.8e-44, Sum P(4) = 8.8e-44
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 611 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 659
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1218 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1276
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 716
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1277 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1333
Score = 58 (25.5 bits), Expect = 7.5e-43, Sum P(4) = 7.5e-43
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 961 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1019
Query: 407 EKLSQRISSAKVWRD 421
+L ++ + W++
Sbjct: 1020 PRLESLVAEVQAWKE 1034
Score = 57 (25.1 bits), Expect = 3.0e-46, Sum P(3) = 3.0e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1458 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1501
Score = 47 (21.6 bits), Expect = 3.0e-36, Sum P(3) = 3.0e-36
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 880 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 937
Query: 1255 A 1255
A
Sbjct: 938 A 938
Score = 45 (20.9 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 979
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1210 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1268
Query: 980 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1028
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1269 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1318
Score = 44 (20.5 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + +K SL+ I++S
Sbjct: 706 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 749
Score = 41 (19.5 bits), Expect = 4.3e-41, Sum P(4) = 4.3e-41
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 317 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 374
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 973 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1027
Query: 375 EINA 378
E+ A
Sbjct: 1028 EVQA 1031
Score = 40 (19.1 bits), Expect = 8.3e-39, Sum P(5) = 8.3e-39
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 474 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 529
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1181 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1237
Score = 40 (19.1 bits), Expect = 8.6e-38, Sum P(4) = 8.6e-38
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 364 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 421
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1224 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1281
Query: 422 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 469
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1282 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1338
Score = 38 (18.4 bits), Expect = 1.3e-38, Sum P(5) = 1.3e-38
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 450 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 484
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1205 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1240
Score = 37 (18.1 bits), Expect = 1.7e-41, Sum P(4) = 1.7e-41
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 664
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1308 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1338
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 448 (162.8 bits), Expect = 9.7e-49, Sum P(3) = 9.7e-49
Identities = 92/216 (42%), Positives = 134/216 (62%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN G
Sbjct: 508 MKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQG 567
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ +++
Sbjct: 568 FNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQK 627
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+M RE++ + G+ S + P+ ++ C C+ ++SAV C C
Sbjct: 628 DMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKTTCFMSAVYCPC 682
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 683 KPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 718
Score = 130 (50.8 bits), Expect = 9.7e-49, Sum P(3) = 9.7e-49
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 722 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 779
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 780 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 839
Query: 525 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 576
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 840 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 899
Query: 577 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 631
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 900 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 959
Query: 632 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 960 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1011
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 743
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1012 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1071
Query: 744 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 801
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1072 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1124
Query: 802 PSLEDVESLMAVAEG 816
+E + SL A EG
Sbjct: 1125 KEMEALRSLRAANEG 1139
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 977 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 276 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 330
Score = 81 (33.6 bits), Expect = 9.7e-49, Sum P(3) = 9.7e-49
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1185 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1242
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1097 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1152
Query: 1243 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1286
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1153 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1196
Score = 80 (33.2 bits), Expect = 4.2e-45, Sum P(4) = 4.2e-45
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 813 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 870
Query: 446 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 501
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 871 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 929
Query: 502 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 555
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 930 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 988
Query: 556 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 613
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 989 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1038
Query: 614 AAMRWEERAADILI 627
W+E AA+ +
Sbjct: 1039 EVQAWKECAANTFL 1052
Score = 76 (31.8 bits), Expect = 3.6e-42, Sum P(3) = 3.6e-42
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 689 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 747
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 750 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 808
Query: 748 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 807
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 809 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 864
Query: 808 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 867
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 865 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 921
Query: 868 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 924
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 922 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 979
Query: 925 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 963
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 980 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1019
Score = 72 (30.4 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1247 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1285
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1469 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1512
Score = 72 (30.4 bits), Expect = 4.2e-45, Sum P(4) = 4.2e-45
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1203 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1260
Score = 65 (27.9 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1142 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1199
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 949 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 996
Query: 1200 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1249
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 997 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1056
Query: 1250 PYDEKAMIACYQCD 1263
PY ++ C +CD
Sbjct: 1057 PYSLLEVL-CPRCD 1069
Score = 63 (27.2 bits), Expect = 1.9e-40, Sum P(4) = 1.9e-40
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 934 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 978
Score = 59 (25.8 bits), Expect = 9.2e-44, Sum P(4) = 9.2e-44
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 611 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 659
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1229 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1287
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 716
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1288 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1344
Score = 58 (25.5 bits), Expect = 7.8e-43, Sum P(4) = 7.8e-43
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 972 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1030
Query: 407 EKLSQRISSAKVWRD 421
+L ++ + W++
Sbjct: 1031 PRLESLVAEVQAWKE 1045
Score = 57 (25.1 bits), Expect = 3.1e-46, Sum P(3) = 3.1e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1469 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1512
Score = 47 (21.6 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 891 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 948
Query: 1255 A 1255
A
Sbjct: 949 A 949
Score = 45 (20.9 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 979
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1221 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1279
Query: 980 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1028
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1280 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1329
Score = 44 (20.5 bits), Expect = 1.9e-40, Sum P(4) = 1.9e-40
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + +K SL+ I++S
Sbjct: 717 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 760
Score = 41 (19.5 bits), Expect = 4.5e-41, Sum P(4) = 4.5e-41
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 317 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 374
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 984 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1038
Query: 375 EINA 378
E+ A
Sbjct: 1039 EVQA 1042
Score = 40 (19.1 bits), Expect = 8.8e-39, Sum P(5) = 8.8e-39
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 474 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 529
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1192 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1248
Score = 40 (19.1 bits), Expect = 9.0e-38, Sum P(4) = 9.0e-38
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 364 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 421
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1235 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1292
Query: 422 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 469
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1293 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1349
Score = 38 (18.4 bits), Expect = 1.4e-38, Sum P(5) = 1.4e-38
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 450 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 484
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1216 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1251
Score = 37 (18.1 bits), Expect = 1.7e-41, Sum P(4) = 1.7e-41
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 664
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1319 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1349
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 448 (162.8 bits), Expect = 9.8e-49, Sum P(3) = 9.8e-49
Identities = 92/216 (42%), Positives = 134/216 (62%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN G
Sbjct: 509 MKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQG 568
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ +++
Sbjct: 569 FNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQK 628
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+M RE++ + G+ S + P+ ++ C C+ ++SAV C C
Sbjct: 629 DMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKTTCFMSAVYCPC 683
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 684 KPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 719
Score = 130 (50.8 bits), Expect = 9.8e-49, Sum P(3) = 9.8e-49
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 723 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 780
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 781 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 840
Query: 525 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 576
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 841 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 900
Query: 577 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 631
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 901 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 960
Query: 632 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 961 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1012
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 743
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1013 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1072
Query: 744 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 801
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1073 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1125
Query: 802 PSLEDVESLMAVAEG 816
+E + SL A EG
Sbjct: 1126 KEMEALRSLRAANEG 1140
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 977 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 277 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 331
Score = 81 (33.6 bits), Expect = 9.8e-49, Sum P(3) = 9.8e-49
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1185 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1242
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1098 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1153
Query: 1243 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1286
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1154 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1197
Score = 80 (33.2 bits), Expect = 4.2e-45, Sum P(4) = 4.2e-45
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 814 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 871
Query: 446 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 501
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 872 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 930
Query: 502 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 555
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 931 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 989
Query: 556 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 613
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 990 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1039
Query: 614 AAMRWEERAADILI 627
W+E AA+ +
Sbjct: 1040 EVQAWKECAANTFL 1053
Score = 76 (31.8 bits), Expect = 3.6e-42, Sum P(3) = 3.6e-42
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 689 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 747
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 751 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 809
Query: 748 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 807
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 810 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 865
Query: 808 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 867
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 866 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 922
Query: 868 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 924
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 923 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 980
Query: 925 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 963
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 981 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1020
Score = 72 (30.4 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1247 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1285
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1470 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1513
Score = 72 (30.4 bits), Expect = 4.2e-45, Sum P(4) = 4.2e-45
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1204 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1261
Score = 65 (27.9 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1142 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1199
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 950 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 997
Query: 1200 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1249
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 998 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1057
Query: 1250 PYDEKAMIACYQCD 1263
PY ++ C +CD
Sbjct: 1058 PYSLLEVL-CPRCD 1070
Score = 63 (27.2 bits), Expect = 1.9e-40, Sum P(4) = 1.9e-40
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 935 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 979
Score = 59 (25.8 bits), Expect = 9.3e-44, Sum P(4) = 9.3e-44
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 611 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 659
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1230 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1288
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 716
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1289 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1345
Score = 58 (25.5 bits), Expect = 7.9e-43, Sum P(4) = 7.9e-43
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 973 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1031
Query: 407 EKLSQRISSAKVWRD 421
+L ++ + W++
Sbjct: 1032 PRLESLVAEVQAWKE 1046
Score = 57 (25.1 bits), Expect = 3.1e-46, Sum P(3) = 3.1e-46
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1470 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1513
Score = 47 (21.6 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 892 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 949
Query: 1255 A 1255
A
Sbjct: 950 A 950
Score = 45 (20.9 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 979
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1222 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1280
Query: 980 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1028
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1281 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1330
Score = 44 (20.5 bits), Expect = 1.9e-40, Sum P(4) = 1.9e-40
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + +K SL+ I++S
Sbjct: 718 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 761
Score = 41 (19.5 bits), Expect = 4.5e-41, Sum P(4) = 4.5e-41
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 317 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 374
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 985 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1039
Query: 375 EINA 378
E+ A
Sbjct: 1040 EVQA 1043
Score = 40 (19.1 bits), Expect = 8.8e-39, Sum P(5) = 8.8e-39
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 474 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 529
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1193 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1249
Score = 40 (19.1 bits), Expect = 9.0e-38, Sum P(4) = 9.0e-38
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 364 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 421
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1236 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1293
Query: 422 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 469
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1294 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1350
Score = 38 (18.4 bits), Expect = 1.4e-38, Sum P(5) = 1.4e-38
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 450 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 484
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1217 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1252
Score = 37 (18.1 bits), Expect = 1.7e-41, Sum P(4) = 1.7e-41
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 664
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1320 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1350
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 446 (162.1 bits), Expect = 2.7e-48, Sum P(3) = 2.7e-48
Identities = 90/216 (41%), Positives = 133/216 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 376 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 435
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 436 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 495
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C C
Sbjct: 496 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCSC 550
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K L YR+TL +LY +
Sbjct: 551 KPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 586
Score = 121 (47.7 bits), Expect = 2.7e-48, Sum P(3) = 2.7e-48
Identities = 69/337 (20%), Positives = 142/337 (42%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 590 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 647
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
AE C + + L G + + TVN + + Y + L D+
Sbjct: 648 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 707
Query: 525 LVNINGRKDQHN--VIDE-------LNCILKEGASLRIQVDDLPLVEVELKKAHCREKAL 575
L + + QH+ ++ E L +L +++ L + + L++A E+
Sbjct: 708 LNRVEDFQ-QHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQ 766
Query: 576 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 631
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 767 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 826
Query: 632 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 689
+ ++ ++I LP+ +++ + A+ WL++ E A P L
Sbjct: 827 HSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRV--PV------L 878
Query: 690 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 726
++L +LV++ + + + L LE ++ + W+ A
Sbjct: 879 DTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECA 915
Score = 84 (34.6 bits), Expect = 2.7e-48, Sum P(3) = 2.7e-48
Identities = 26/133 (19%), Positives = 59/133 (44%)
Query: 909 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 968
+L LK P +K +K++ + + ++ E T+ + LG + +
Sbjct: 940 LLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETA--SAMATLGEARLREMEA 997
Query: 969 HRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNH 1023
+SL + N+ P V + +C+C ++ + + + C C+D +H C+ + +
Sbjct: 998 LQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPM--IQCELCRDAFHTSCVAVPSISQG- 1054
Query: 1024 AEAYICPYCQYFE 1036
++CP+C+ E
Sbjct: 1055 LRIWLCPHCRRSE 1067
Score = 80 (33.2 bits), Expect = 5.1e-44, Sum P(3) = 5.1e-44
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 693
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 731 ELQDLLDVSFEFDVELPQLAEMRIRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 784
Query: 694 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
DL V + + + K L++++ E W + A SLL+
Sbjct: 785 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 822
Score = 71 (30.1 bits), Expect = 6.1e-47, Sum P(3) = 6.1e-47
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 1166 QNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1225
Q LKE L N K + L +L R ++ + A + G L ++ L ++
Sbjct: 947 QRKLKEPL-PNGKKKSTKLESLSDLERALTESKETASAMAT-LGEARLREMEAL----QS 1000
Query: 1226 LPVYLEKELKS-LRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYI 1281
L + E +L S L+ + C+C+K MI C C + +H CV + S + I++
Sbjct: 1001 LRLANEGKLLSPLQDVDIKICLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGLRIWL 1059
Query: 1282 CAACK 1286
C C+
Sbjct: 1060 CPHCR 1064
Score = 71 (30.1 bits), Expect = 4.2e-41, Sum P(3) = 4.2e-41
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1071 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGL 1128
Score = 65 (27.9 bits), Expect = 1.9e-42, Sum P(3) = 1.9e-42
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P L++ + AR +Q++ L A ++ L+ L +R +P+ +
Sbjct: 840 EEIPAYLPNGAALKDSVQRARDWLQDVEG-LQAGGRVPVLDTLIELVTRGRSIPVHLNSL 898
Query: 407 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 440
+L ++ + W++ +V ++ P ++ ++VL
Sbjct: 899 PRLETLVAEVQAWKECAVNTFLTENSPYSL-LEVL 932
Score = 63 (27.2 bits), Expect = 3.0e-42, Sum P(3) = 3.0e-42
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 681 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSF 740
Query: 446 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQ---ELGDFTVNM 501
E D+++ + E + L+ E + C + S++L + L+ L ++
Sbjct: 741 E-FDVELPQLAEMRIRLEQARWLEEVQQACLDP--SSLTLDDMRRLIDLGVGLAPYSAVE 797
Query: 502 PELELLKQYHSDAIFWIARLNDILV-----NINGRKDQHNVIDELNCILKEGASLRIQV 555
+ L++ + + W + +L ++N I+E+ L GA+L+ V
Sbjct: 798 KAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSV 856
Score = 63 (27.2 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1204
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 761 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 820
Query: 1205 VLDSGALSLDKVFELIAEGENLPVYL 1230
+ SL+ + + E E +P YL
Sbjct: 821 LKARPRHSLNSLATAVKEIEEIPAYL 846
Score = 62 (26.9 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1152 KLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGAL 1211
KLL T P+ ++Q+ L ++ ++ L + ++W + ++ LD +L
Sbjct: 720 KLLSEET-PSAAELQDLLDVSFEFDVELPQLAEMRI-RLEQ--ARWLEEVQQACLDPSSL 775
Query: 1212 SLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1255
+LD + LI G L Y E R + +L + +D+KA
Sbjct: 776 TLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDKA 817
Score = 58 (25.5 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 952 EPLPNGKKKSTKLESLSDLERALTESKETA-SAMATLGEARLREMEA-------LQSLRL 1003
Query: 410 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 467
+ +D ++ C+ K PAA I +L +A + VP L+ I
Sbjct: 1004 ANEGKLLSPLQDVDIKICLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGLR-IWLC 1060
Query: 468 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1061 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1114
Query: 528 IN 529
N
Sbjct: 1115 GN 1116
Score = 55 (24.4 bits), Expect = 2.0e-41, Sum P(3) = 2.0e-41
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 732
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 679 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 724
Score = 51 (23.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 1213 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC--------RKPYDEKAMIACYQC 1262
LD + EL+ G ++PV+L L++L A + C PY ++ C +C
Sbjct: 878 LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVL-CPRC 936
Query: 1263 D 1263
D
Sbjct: 937 D 937
Score = 45 (20.9 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 716
S W N +L S F+ SC L S + +L+ +++ L++SL E EL + +
Sbjct: 1156 SLPDDW-DNRTSYLHSPFSTG-RSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTL 1212
Score = 41 (19.5 bits), Expect = 8.2e-44, Sum P(3) = 8.2e-44
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNK-- 977
PE + + +++ NW+ R ++++ + V D+ GLL Q+ + NK
Sbjct: 1089 PEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGS-GLLYSRWQASAGQVSDTNKVS 1147
Query: 978 -PHGSVSMTL 986
P G+ S +L
Sbjct: 1148 QPPGTTSFSL 1157
Score = 38 (18.4 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 579 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 637
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 638 LLRHL-RLVT--QDAEKC 652
Score = 38 (18.4 bits), Expect = 2.7e-38, Sum P(3) = 2.7e-38
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 585 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 628
Score = 37 (18.1 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 638 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 675
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1077 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1114
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 449 (163.1 bits), Expect = 3.5e-48, Sum P(3) = 3.5e-48
Identities = 91/216 (42%), Positives = 134/216 (62%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 534 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 593
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 594 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 653
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ CI C+ ++SA++C C
Sbjct: 654 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCSC 708
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K +L YR+TL +LY +
Sbjct: 709 KPGLLVCLHHVKELCSCPPYKYNLRYRYTLDDLYPM 744
Score = 129 (50.5 bits), Expect = 3.5e-48, Sum P(3) = 3.5e-48
Identities = 70/337 (20%), Positives = 143/337 (42%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 748 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 805
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
AE C + + L G + + TVN + + Y + L D+
Sbjct: 806 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 865
Query: 525 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 576
L + + Q + +E+ L+E + + D +LP L E + L++A E+ +
Sbjct: 866 LNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEFDVELPQLTEMRIRLEQARWLEEVQQ 925
Query: 577 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 631
AC + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 926 ACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRH 985
Query: 632 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ ++ ++I LP+ +++ + A+ W+++ + A P LE
Sbjct: 986 SLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDWVQDVDALQAGGRV--PV------LE 1037
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
+L +LV++ + + + L LE ++ W+ A+
Sbjct: 1038 TLIELVARGRSIPVHLNSLPRLEMLVAEVHAWKECAA 1074
Score = 93 (37.8 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 68/370 (18%), Positives = 152/370 (41%)
Query: 689 LESLKDLVSQS-KFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 747
L ++D QS K L + EL+++++ + L + R L++ + +
Sbjct: 866 LNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEFDVELPQLTE-MRIRLEQARWLEEVQ 924
Query: 748 NSLVSKIEQLITSMESAANCGLSLG-FDFHE--ISELQNACSTL-HWCKKALSFLSVSP- 802
+ + + M + G+ L + E ++ LQ + HW KA S L P
Sbjct: 925 QACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPR 984
Query: 803 -SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEE 860
SL + + + E + + ++L +S+ W++ ++ + A + L + E
Sbjct: 985 HSLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDWVQD-VDALQAGGRVP--VLETLIE 1041
Query: 861 VLAGCKGINF---SFP---VVIGELTS---AIQKHKLWQEQVHQFFNLKCAQQSWSLMLQ 911
++A + I S P +++ E+ + K L + + + C + L L
Sbjct: 1042 LVARGRSIPVHLNSLPRLEMLVAEVHAWKECAAKTFLPENSTYSLLEVLCPRCDIGL-LG 1100
Query: 912 LKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 971
LK P +K +K++ + + ++ E T+ + LG + + +S
Sbjct: 1101 LKRKQRKLKEPLPSGKKRSTKLESLSDLERALMESKETAAA--MATLGEARLREMEALQS 1158
Query: 972 LYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEA 1026
L N+ P + M +C+C ++ + + + C C+D +H C+ + ++ +
Sbjct: 1159 LRFANEEKLLSPVQDLEMKVCLCQKTPATPM--IQCELCRDAFHTSCVAAPSISQS-SRI 1215
Query: 1027 YICPYCQYFE 1036
++CP+C+ E
Sbjct: 1216 WLCPHCRRSE 1225
Score = 80 (33.2 bits), Expect = 2.6e-46, Sum P(4) = 2.6e-46
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 748
LE + L++ + +++ L E L +I WQ+ A LL L +D +G GL +
Sbjct: 1229 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKLVQDQVGSGLLS 1288
Query: 749 S 749
S
Sbjct: 1289 S 1289
Score = 78 (32.5 bits), Expect = 1.5e-47, Sum P(4) = 1.5e-47
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 1206 LDSGALSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIAC 1259
+DS L ++ ++L+ AE +LP Y E+E C +P DE + C
Sbjct: 1446 MDSFKLERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC 1505
Query: 1260 Y-QCDEWYHIDCVKL---LSAPEIYICAAC 1285
C++W+H CV + ++ E YIC C
Sbjct: 1506 DGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 77 (32.2 bits), Expect = 2.6e-46, Sum P(4) = 2.6e-46
Identities = 34/165 (20%), Positives = 70/165 (42%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P +L++ + AR +Q+++A L A ++ LE L +R +P+ +
Sbjct: 998 EEIPAYLPNGTVLKDSVQRARDWVQDVDA-LQAGGRVPVLETLIELVARGRSIPVHLNSL 1056
Query: 407 EKLSQRISSAKVWRDSVRKCI--SNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMI 464
+L ++ W++ K N + +E+ + + + L LK + L
Sbjct: 1057 PRLEMLVAEVHAWKECAAKTFLPENSTYSLLEV-LCPRCDIGLLGLKRKQRKLKEPLPS- 1114
Query: 465 GQAESCRARC-SEALRGSMSLKTVELLLQELGDFTVNMPELELLK 508
G+ S + S+ R M K + LG+ + E+E L+
Sbjct: 1115 GKKRSTKLESLSDLERALMESKETAAAMATLGE--ARLREMEALQ 1157
Score = 76 (31.8 bits), Expect = 3.5e-48, Sum P(3) = 3.5e-48
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1231 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAPEIYICAACK 1286
EK L ++ M C+C+K MI C C + +H CV + + I++C C+
Sbjct: 1165 EKLLSPVQDLEMKVCLCQKT-PATPMIQCELCRDAFHTSCVAAPSISQSSRIWLCPHCR 1222
Score = 68 (29.0 bits), Expect = 2.2e-45, Sum P(4) = 2.2e-45
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 839 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQQSQKLLSEEMPSAAELQELLDVSF 898
Query: 446 EALDLKIDVPE-TDMLLKMIGQA---ESCRARCSEALRGSMSLKTVELLLQELG 495
E D +++P+ T+M +++ QA E + C ++ S+SL + L+ +LG
Sbjct: 899 E-FD--VELPQLTEMRIRL-EQARWLEEVQQACLDS--SSLSLDDMRRLI-DLG 945
Score = 68 (29.0 bits), Expect = 7.1e-38, Sum P(3) = 7.1e-38
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
++W + ++ LDS +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 917 ARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 974
Query: 1255 A 1255
A
Sbjct: 975 A 975
Score = 61 (26.5 bits), Expect = 3.3e-43, Sum P(4) = 3.3e-43
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
+L EL + W D AK ++ SL + + E E +P YL
Sbjct: 960 RLQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYL 1004
Score = 55 (24.4 bits), Expect = 3.6e-45, Sum P(4) = 3.6e-45
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + E++++ C +C +H C+ + + E YIC C
Sbjct: 1492 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRC 1535
Score = 50 (22.7 bits), Expect = 4.2e-40, Sum P(4) = 4.2e-40
Identities = 41/189 (21%), Positives = 72/189 (38%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
+PLP + L++ ++ R+L++ A +A + + E L A + EKL
Sbjct: 1110 EPLPSGKKRSTKLESLSDLERALMESKETA-AAMATLGEARLREMEALQ-SLRFANEEKL 1167
Query: 410 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 468
+ ++ + C+ K PA I +L +A + P + I
Sbjct: 1168 LSPVQDLEM-----KVCLCQKTPATPMIQC--ELCRDAFHTSCVAAPSISQSSR-IWLCP 1219
Query: 469 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 528
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1220 HCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSG 1273
Query: 529 NGRKDQHNV 537
N + Q V
Sbjct: 1274 NLKLVQDQV 1282
Score = 48 (22.0 bits), Expect = 7.3e-42, Sum P(4) = 7.3e-42
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 1213 LDKVFELIAEGENLPVYL 1230
L+ + EL+A G ++PV+L
Sbjct: 1036 LETLIELVARGRSIPVHL 1053
Score = 47 (21.6 bits), Expect = 6.8e-43, Sum P(4) = 6.8e-43
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 716
S W N +L S F+ + L L + +L+ +++ L++SL E EL + +
Sbjct: 1314 SLPDDW-DNRTSYLHSPFSTGQSCLPLHGLSPEVNELLMEAQLLQVSLPEIQELYQTL 1370
Score = 45 (20.9 bits), Expect = 5.3e-43, Sum P(4) = 5.3e-43
Identities = 31/144 (21%), Positives = 56/144 (38%)
Query: 286 EAEQFLWAGFEMDAVRDMVNKL---IEGRRWAEGIRD-CLHKAENWSSLPGSDSEKVRLD 341
E ++ L FE D + ++ +E RW E ++ CL SSL D ++
Sbjct: 889 ELQELLDVSFEFDVELPQLTEMRIRLEQARWLEEVQQACLDS----SSLSLDDMRRL--- 941
Query: 342 CVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 401
++ +G P E LQ + + + L A + S S L
Sbjct: 942 -IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRHS--------LSSLAT 992
Query: 402 CIVESEKLSQRISSAKVWRDSVRK 425
+ E E++ + + V +DSV++
Sbjct: 993 AVKEMEEIPAYLPNGTVLKDSVQR 1016
Score = 40 (19.1 bits), Expect = 1.5e-47, Sum P(4) = 1.5e-47
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGT 949
PE + + +++ NW+ R ++++ +
Sbjct: 1247 PEGDALRYMIERTVNWQHRAQQLLSS 1272
Score = 38 (18.4 bits), Expect = 4.2e-40, Sum P(4) = 4.2e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 743 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 786
Score = 38 (18.4 bits), Expect = 4.2e-40, Sum P(4) = 4.2e-40
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 795
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 796 LLRHL-RLVT--QDAEKC 810
Score = 37 (18.1 bits), Expect = 7.3e-42, Sum P(4) = 7.3e-42
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSE 670
E +++ +Q + V LP + E+ + T S ++ ++
Sbjct: 1345 EVNELLMEAQLLQVSLPEIQELYQTLLTKPSSVQQAD 1381
Score = 37 (18.1 bits), Expect = 7.3e-42, Sum P(4) = 7.3e-42
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 638 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 675
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1235 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 449 (163.1 bits), Expect = 9.1e-48, Sum P(3) = 9.1e-48
Identities = 91/216 (42%), Positives = 134/216 (62%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 536 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 595
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 596 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 655
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ CI C+ ++SA++C C
Sbjct: 656 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCSC 710
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K +L YR+TL +LY +
Sbjct: 711 KPGLLVCLHHVKELCSCPPYKYNLRYRYTLDDLYPM 746
Score = 132 (51.5 bits), Expect = 9.1e-48, Sum P(3) = 9.1e-48
Identities = 67/345 (19%), Positives = 144/345 (41%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 750 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 807
Query: 467 -AESCRARCSEALRGSMSLK--------TVELLLQELGDFTVNMPELELLKQYHSDAIFW 517
AE C + + L G + +L + EL F + L +
Sbjct: 808 DAEKCASVAQQLLNGKRQTRYRSGGGKSQSQLTVNELRQFVTQLCALPCVLSQTPLLKDL 867
Query: 518 IARLNDILVNINGR-KDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALK 576
+ R+ D ++ EL +L + +++ L + + L++A E+ +
Sbjct: 868 LNRVEDFQQQSQRLLSEERPRASELQQLLDVSFTFDVELPQLAEMRIRLEQARWLEEVQQ 927
Query: 577 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 631
AC + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 928 ACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRH 987
Query: 632 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ ++ ++I LP+ +++ + A+ W+++ + A P LE
Sbjct: 988 SLSSLATAVKEMEEIPAYLPNGTVLKDSVQKARDWVQDVDALQAGGRV--PV------LE 1039
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA 733
+L +LV++ + + + L LE +++ W+ A+ LL+++
Sbjct: 1040 TLIELVARGRSIPVHLNSLPRLEMLVSEVHAWKESAAKTFLLENS 1084
Score = 86 (35.3 bits), Expect = 3.9e-44, Sum P(4) = 3.9e-44
Identities = 51/265 (19%), Positives = 113/265 (42%)
Query: 789 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 845
HW KA S L P SL + + + E + + ++L +S+ W++ ++ +
Sbjct: 972 HWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYLPNGTVLKDSVQKARDWVQD-VDALQ 1030
Query: 846 APCKFKRCKLSDVEEVLAGCKGINF---SFP---VVIGELTS---AIQKHKLWQEQVHQF 896
A + L + E++A + I S P +++ E+ + + K L + +
Sbjct: 1031 AGGRVP--VLETLIELVARGRSIPVHLNSLPRLEMLVSEVHAWKESAAKTFLLENSPYSL 1088
Query: 897 FNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNS 956
+ C + L L LK P +K +K++ + + ++ E T+ +
Sbjct: 1089 LEVLCPRCDIGL-LGLKRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETA--SAMA 1145
Query: 957 LLGLLQKIKQSVHRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHL 1011
LG + + +SL N+ P V +C+C ++ + + + C C+D +H
Sbjct: 1146 TLGEARLREMEALQSLRFANEEKLLSPAQDVETKVCLCQKTPATPM--IQCELCRDAFHT 1203
Query: 1012 QCLRPTEVDRNHAEAYICPYCQYFE 1036
C+ + + ++ + ++CP+C+ E
Sbjct: 1204 SCVAVSSISQS-SRIWLCPHCRRSE 1227
Score = 83 (34.3 bits), Expect = 5.4e-43, Sum P(4) = 5.4e-43
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P +L++ ++AR +Q+++A L A ++ LE L +R +P+ +
Sbjct: 1000 EEIPAYLPNGTVLKDSVQKARDWVQDVDA-LQAGGRVPVLETLIELVARGRSIPVHLNSL 1058
Query: 407 EKLSQRISSAKVWRDSVRK 425
+L +S W++S K
Sbjct: 1059 PRLEMLVSEVHAWKESAAK 1077
Score = 77 (32.2 bits), Expect = 3.3e-43, Sum P(4) = 3.3e-43
Identities = 54/246 (21%), Positives = 98/246 (39%)
Query: 518 IARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP--LVEVELKKAHCREKAL 575
+AR I V++N ++ E++ KE A+ +++ P L+EV + L
Sbjct: 1045 VARGRSIPVHLNSLPRLEMLVSEVHA-WKESAAKTFLLENSPYSLLEVLCPRCDIGLLGL 1103
Query: 576 KACDTKM--PLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADI-LIHKAQM 632
K K+ PL ++ + + L L A A E R ++ + +
Sbjct: 1104 KRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETASAMATLGEARLREMEALQSLRF 1163
Query: 633 CEFEDIIRASQDIF--VVL----PSLDEVQNEI---STAKSWLKNSELFLASAFAVAPAS 683
E ++ +QD+ V L P+ +Q E+ + S + S + +S + P
Sbjct: 1164 ANEEKLLSPAQDVETKVCLCQKTPATPMIQCELCRDAFHTSCVAVSSISQSSRIWLCP-H 1222
Query: 684 CSLLR---LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 740
C LE + L++ + +++ L E L +I WQ+ A LL L +D
Sbjct: 1223 CRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKLVQD 1282
Query: 741 DIGDGL 746
G GL
Sbjct: 1283 QAGSGL 1288
Score = 70 (29.7 bits), Expect = 5.0e-47, Sum P(4) = 5.0e-47
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 1211 LSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIACY-QCD 1263
L ++ ++L+ AE +LP Y E+E C +P DE + C C+
Sbjct: 1453 LERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCN 1512
Query: 1264 EWYHIDCVKL---LSAPEIYICAAC 1285
+W+H CV + ++ E YIC C
Sbjct: 1513 QWFHQVCVGVSPEMAEKEDYICVRC 1537
Score = 69 (29.3 bits), Expect = 9.1e-48, Sum P(3) = 9.1e-48
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 1231 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYICAACK 1286
EK L + C+C+K MI C C + +H CV + S + I++C C+
Sbjct: 1167 EKLLSPAQDVETKVCLCQKT-PATPMIQCELCRDAFHTSCVAVSSISQSSRIWLCPHCR 1224
Score = 68 (29.0 bits), Expect = 7.2e-38, Sum P(3) = 7.2e-38
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
++W + ++ LDS +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 919 ARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 976
Query: 1255 A 1255
A
Sbjct: 977 A 977
Score = 61 (26.5 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
+L EL + W D AK ++ SL + + E E +P YL
Sbjct: 962 RLQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYL 1006
Score = 58 (25.5 bits), Expect = 3.9e-44, Sum P(4) = 3.9e-44
Identities = 22/111 (19%), Positives = 53/111 (47%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL ++ LP + ++ L ++ + ++ ++ +S + P A E+ L + S
Sbjct: 841 VNELRQFVTQLCALPCVLSQTPLLKDLLNRVEDFQQQSQRLLSEERPRASELQQLLDV-S 899
Query: 446 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELG 495
D+++ + E + L+ E + C ++ S+SL + L+ +LG
Sbjct: 900 FTFDVELPQLAEMRIRLEQARWLEEVQQACLDS--SSLSLDDMRRLI-DLG 947
Score = 55 (24.4 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 989 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + E++++ C +C +H C+ + + E YIC C
Sbjct: 1494 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRC 1537
Score = 53 (23.7 bits), Expect = 6.7e-40, Sum P(4) = 6.7e-40
Identities = 43/180 (23%), Positives = 67/180 (37%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
DPLP + L++ ++ R+L + A SA + + E L A + EKL
Sbjct: 1112 DPLPSGKKRSTKLESLSDLERALTESKETA-SAMATLGEARLREMEALQ-SLRFANEEKL 1169
Query: 410 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 469
+S A+ V C+ K PA I +L +A + I
Sbjct: 1170 ---LSPAQDVETKV--CLCQKTPATPMIQC--ELCRDAFHTSCVAVSSISQSSRIWLCPH 1222
Query: 470 CRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 529
CR SE L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1223 CRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGN 1276
Score = 50 (22.7 bits), Expect = 5.4e-43, Sum P(4) = 5.4e-43
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 660 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 716
S + W N +L S F+ + L L + +L+ +++ L++SL E EL + +
Sbjct: 1316 SLPEDW-DNRTSYLHSPFSTGQSCIPLHGLSPEVNELLMEAQLLQVSLPEVQELYQTL 1372
Score = 48 (22.0 bits), Expect = 4.2e-40, Sum P(4) = 4.2e-40
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 1213 LDKVFELIAEGENLPVYL 1230
L+ + EL+A G ++PV+L
Sbjct: 1038 LETLIELVARGRSIPVHL 1055
Score = 43 (20.2 bits), Expect = 2.8e-42, Sum P(4) = 2.8e-42
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 693
E +++ +Q + V LP + E+ + T S + ++ + V P+S L +
Sbjct: 1347 EVNELLMEAQLLQVSLPEVQELYQTLLTKPSSAQQAD----RSSPVRPSSEKNDCLRGKR 1402
Query: 694 DLVSQSKFLKISLKEQTELEKVINNCERW 722
D ++ L+ LK + E E + + ERW
Sbjct: 1403 DAINS---LERKLKRRPEREGLPS--ERW 1426
Score = 43 (20.2 bits), Expect = 1.2e-41, Sum P(4) = 1.2e-41
Identities = 32/144 (22%), Positives = 55/144 (38%)
Query: 286 EAEQFLWAGFEMDAVRDMVNKL---IEGRRWAEGIRD-CLHKAENWSSLPGSDSEKVRLD 341
E +Q L F D + ++ +E RW E ++ CL SSL D ++
Sbjct: 891 ELQQLLDVSFTFDVELPQLAEMRIRLEQARWLEEVQQACLDS----SSLSLDDMRRL--- 943
Query: 342 CVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 401
++ +G P E LQ + + + L A + S S L
Sbjct: 944 -IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRHS--------LSSLAT 994
Query: 402 CIVESEKLSQRISSAKVWRDSVRK 425
+ E E++ + + V +DSV+K
Sbjct: 995 AVKEMEEIPAYLPNGTVLKDSVQK 1018
Score = 40 (19.1 bits), Expect = 5.0e-47, Sum P(4) = 5.0e-47
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGT 949
PE + + +++ NW+ R ++++ +
Sbjct: 1249 PEGDALRYMIERTVNWQHRAQQLLSS 1274
Score = 38 (18.4 bits), Expect = 4.6e-42, Sum P(4) = 4.6e-42
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 739 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 797
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 798 LLRHL-RLVT--QDAEKC 812
Score = 38 (18.4 bits), Expect = 2.2e-39, Sum P(4) = 2.2e-39
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 745 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 788
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 457 (165.9 bits), Expect = 9.9e-48, Sum P(3) = 9.9e-48
Identities = 98/223 (43%), Positives = 137/223 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVP+Y Q G FVITFPRSYH+GFN G
Sbjct: 539 MKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQG 598
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DW+P G D Y+Q H+ V SH+E++C +A K+D LD ++ +++
Sbjct: 599 FNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKADCLDVVLASAVQK 658
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCP--EY-VGTEEDPTCIICRQYLYLSAVA 175
++ + +ER RE++ RK MG +C +Y + +++ C+ CR YLSA+
Sbjct: 659 DMQLMIKEERELREKV-RK-------MGVAQCELFQYDLLADDERQCVKCRTTCYLSALT 710
Query: 176 CRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
C CRP VCL H LC C L YR TL +LY + V
Sbjct: 711 CPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPMMNAV 753
Score = 113 (44.8 bits), Expect = 9.9e-48, Sum P(3) = 9.9e-48
Identities = 74/346 (21%), Positives = 146/346 (42%)
Query: 411 QRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ-A 467
QR W V + + K + V L E+ + PE D+L L+++ Q A
Sbjct: 755 QRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQSF--PENDLLRQLRLVTQDA 812
Query: 468 ESCRARCSEALRGSMSLK--------TVELLLQELGDFT---VNMP----ELELLKQYHS 512
E C + + L G + +L ++E+ F N+P + LLK+
Sbjct: 813 EKCSSVAQQLLNGKRQTRYRTGKAKSPNQLTVEEMRSFVRQLYNLPCSLTQAPLLKEL-L 871
Query: 513 DAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE 572
++I + ++ L++ D + E+ +L+EG+ + + +LPL+ L++A
Sbjct: 872 NSIEDFQQHSEKLLSDEVSAD---AVSEIESLLEEGSQFDVFLPELPLLRERLEQARWLT 928
Query: 573 KALKACDTK-----MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADI 625
+A D + L+ +R++ V L E++ L +L + EE A +
Sbjct: 929 GVHQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENAQAL 988
Query: 626 LIHKAQMCE-FEDI---IRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 681
L KA+ E E + + + + LP+ +Q+ ++ AK WL+ +E P
Sbjct: 989 L--KARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGG--QVP 1044
Query: 682 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
SL D+V ++ + + L+ +LE ++ + W+ A+
Sbjct: 1045 V------FSSLSDMVLRAHSIPVRLEPLDQLEVQVSEVQSWKETAA 1084
Score = 87 (35.7 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 95/445 (21%), Positives = 176/445 (39%)
Query: 240 NRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYG---TLLREAEQFLWAGFE 296
N P +LT+ + S +E + S K+L S+DA +LL E QF E
Sbjct: 856 NLPCSLTQAPLLKELLNS--IEDFQQHSEKLLSDEVSADAVSEIESLLEEGSQFDVFLPE 913
Query: 297 MDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLP-GSDSEKVRLDCVNELLGFDPLPCN 355
+ +R+ +E RW G+ H+AE+ + P G E +R ++ +G P P
Sbjct: 914 LPLLRER----LEQARWLTGV----HQAEDPVANPCGLSLESMRR-LIDRGVGLTPHPSI 964
Query: 356 EPGHLILQNYAEEARSLIQEINAALSACSKISELELLYS---RASGLPICIVESEKLSQR 412
E LQ + L + A L A S LE L S + G+P + L
Sbjct: 965 ERMMARLQELLTVSEELEENAQALLKARPPES-LETLCSMLTQVEGVPAYLPNCLLLQDT 1023
Query: 413 ISSAKVWRDSVRKC-ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCR 471
++ AK W + + P + + L + ++ ++++ P D L + + +S +
Sbjct: 1024 VNRAKEWLQEAESLQVGGQVPVFSSLSDMV-LRAHSIPVRLE-P-LDQLEVQVSEVQSWK 1080
Query: 472 ARCSEA-LRGSMSLKTVELLLQ--ELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 528
++ L S +E+L E+G ++ ++ +K D + + V +
Sbjct: 1081 ETAAKTFLIKSSPFTLLEVLCPRWEMGS-SLKKKKMRKMK---GDCV---SSGKKKFVKL 1133
Query: 529 NGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELK---KAHCREKALKACDTKMPLD 585
+ D + + K+ AS + ++ L E+E +A K L D
Sbjct: 1134 DSMSDVERALSDS----KDSASAMFTLAEVRLKELESLCSLRASNESKLLPTADCASLKV 1189
Query: 586 FIRQVTAEAVILQIE--REKLF-IDLSGVLAAAMRWEERAADILIH--KAQMCEFEDIIR 640
+ Q A +LQ E R+ + + G + + E + + K + + ++
Sbjct: 1190 CVCQKPAMGAMLQCELCRDAFHSVCVRGP-SDPLDPEAWLCPLCLRSTKPPLDKIRSLLS 1248
Query: 641 ASQDIFVVLPSLDEVQNEISTAKSW 665
+ Q I V LP D ++ I + SW
Sbjct: 1249 SLQRIRVRLPEGDALRYMIERSVSW 1273
Score = 85 (35.0 bits), Expect = 8.2e-47, Sum P(4) = 8.2e-47
Identities = 63/265 (23%), Positives = 109/265 (41%)
Query: 792 KKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVK-WLKRA--LEVISA 846
+ A + L P SLE + S++ EG+ + +L ++ K WL+ A L+V
Sbjct: 983 ENAQALLKARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGGQ 1042
Query: 847 PCKFKRCKLSDVEEVLAGCKGINFSFPV---VIGELTSAIQKHKLWQEQVHQFFNLK--- 900
F LSD+ VL S PV + +L + + + W+E + F +K
Sbjct: 1043 VPVFS--SLSDM--VLRA-----HSIPVRLEPLDQLEVQVSEVQSWKETAAKTFLIKSSP 1093
Query: 901 -------CAQQSWSLMLQLKELGEAAAFDCPEL-EKVLSKVDKVENWKQRCKEIVGTSVG 952
C + L+ K++ + DC +K K+D + + +R S
Sbjct: 1094 FTLLEVLCPRWEMGSSLKKKKMRKMKG-DCVSSGKKKFVKLDSMSD-VERALSDSKDSAS 1151
Query: 953 DKNSLLGLLQKIKQSVHRSLYIYNK----PHGS-VSMTLCMCCESDSKELEFLICSACKD 1007
+L + K +S+ SL N+ P S+ +C+C + + L C C+D
Sbjct: 1152 AMFTLAEVRLKELESLC-SLRASNESKLLPTADCASLKVCVCQKPAMGAM--LQCELCRD 1208
Query: 1008 CYHLQCLRPTEVDRNHAEAYICPYC 1032
+H C+R D EA++CP C
Sbjct: 1209 AFHSVCVRGPS-DPLDPEAWLCPLC 1232
Score = 79 (32.9 bits), Expect = 9.9e-48, Sum P(3) = 9.9e-48
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1232 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---EIYICAAC 1285
K L + S+ C+C+KP AM+ C C + +H CV+ S P E ++C C
Sbjct: 1177 KLLPTADCASLKVCVCQKPA-MGAMLQCELCRDAFHSVCVRGPSDPLDPEAWLCPLC 1232
Score = 79 (32.9 bits), Expect = 4.0e-47, Sum P(4) = 4.0e-47
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 1247 CRKPYDEKA-MIACYQCDEWYHIDCVKL---LSAPEIYICAAC 1285
C +P E+ + C C+ W+H+ CV + L+A E Y+C +C
Sbjct: 1471 CLQPEGEEVDWVQCDCCNRWFHMICVGVSAELAAEEDYMCVSC 1513
Score = 71 (30.1 bits), Expect = 2.7e-46, Sum P(4) = 2.7e-46
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 984 MTLC---MCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
MTLC C + + +E++++ C C +H+ C+ + E Y+C C
Sbjct: 1463 MTLCPAESCLQPEGEEVDWVQCDCCNRWFHMICVG-VSAELAAEEDYMCVSC 1513
Score = 67 (28.6 bits), Expect = 8.2e-47, Sum P(4) = 8.2e-47
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 732
L +E ++ V Q L SL + L++++N+ E +Q H+ LL D
Sbjct: 842 LTVEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSD 887
Score = 53 (23.7 bits), Expect = 2.3e-45, Sum P(4) = 2.3e-45
Identities = 16/82 (19%), Positives = 38/82 (46%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ E+ + LP + ++ L + ++S + ++ K +S++ A ++ LE
Sbjct: 844 VEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSDEVSADAVSEIESLLE- 902
Query: 446 EALDLKIDVPETDMLLKMIGQA 467
E + +PE +L + + QA
Sbjct: 903 EGSQFDVFLPELPLLRERLEQA 924
Score = 52 (23.4 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 748
L+ ++ L+S + +++ L E L +I WQ ++ D+ L G G S
Sbjct: 1240 LDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI-DSYGLSSTSQDGRGASP 1298
Query: 749 S 749
S
Sbjct: 1299 S 1299
Score = 50 (22.7 bits), Expect = 9.6e-42, Sum P(4) = 9.6e-42
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 474 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 525
C LR + L + LL L V +PE + L+ ++ W R+ +++
Sbjct: 1229 CPLCLRSTKPPLDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI 1281
Score = 46 (21.3 bits), Expect = 9.5e-41, Sum P(3) = 9.5e-41
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 437 IDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEAL 478
+D + L S +++ +PE D L MI ++ S + R E +
Sbjct: 1240 LDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI 1281
Score = 45 (20.9 bits), Expect = 1.1e-42, Sum P(4) = 1.1e-42
Identities = 15/89 (16%), Positives = 39/89 (43%)
Query: 1146 WRVRVSKLLEGLTKP---TIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVA 1201
W V + + + P ++ ++ + G+ + P + +L EL + + + A
Sbjct: 926 WLTGVHQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENA 985
Query: 1202 KKVVLDSGALSLDKVFELIAEGENLPVYL 1230
+ ++ SL+ + ++ + E +P YL
Sbjct: 986 QALLKARPPESLETLCSMLTQVEGVPAYL 1014
Score = 45 (20.9 bits), Expect = 5.8e-41, Sum P(5) = 5.8e-41
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 729
LE+L +++Q + + L L+ +N + W A SL
Sbjct: 997 LETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESL 1037
Score = 44 (20.5 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 440 LYKLESEALDLKIDVPETDMLLKMI 464
L +L E L L++ +PET L +++
Sbjct: 1350 LEELMVEGLVLQVSLPETQQLYRLL 1374
Score = 43 (20.2 bits), Expect = 5.1e-41, Sum P(4) = 5.1e-41
Identities = 27/142 (19%), Positives = 61/142 (42%)
Query: 580 TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDII 639
TK PLD IR + + +++ + L ++ ++ W+ R +++ +D
Sbjct: 1236 TKPPLDKIRSLLSSLQRIRVRLPEGDA-LRYMIERSVSWQRRVREVIDSYGLSSTSQDGR 1294
Query: 640 RAS--QDIFVVLPSLDEVQ--NEISTAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKD 694
AS Q+++ ++Q S + W + + + F L L L++
Sbjct: 1295 GASPSQNLYRSTGHSRKLQLCGSPSRCQDWAVSGQE--QTVFYTEQRCIPLQGLSPELEE 1352
Query: 695 LVSQSKFLKISLKEQTELEKVI 716
L+ + L++SL E +L +++
Sbjct: 1353 LMVEGLVLQVSLPETQQLYRLL 1374
Score = 42 (19.8 bits), Expect = 4.0e-47, Sum P(4) = 4.0e-47
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 971
PE + + +++ +W++R +E++ + S G Q+++RS
Sbjct: 1258 PEGDALRYMIERSVSWQRRVREVIDSYGLSSTSQDGRGASPSQNLYRS 1305
Score = 40 (19.1 bits), Expect = 7.0e-40, Sum P(4) = 7.0e-40
Identities = 8/48 (16%), Positives = 22/48 (45%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 971
P + V + + ++W R E++ + K ++ +++S +S
Sbjct: 748 PMMNAVRQRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQS 795
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 435 (158.2 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 92/213 (43%), Positives = 132/213 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 498 MKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 557
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 558 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHK 617
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KG+ ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 618 EMFIMVQEERRLRKALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 672
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P VCL H LC+C + + +L YR+TL EL
Sbjct: 673 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 705
Score = 149 (57.5 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 82/383 (21%), Positives = 159/383 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 680 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 735
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGS-------- 481
+ L LESEA + + P +++L ++ + + E+C A+ + G
Sbjct: 736 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 793
Query: 482 MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDEL 541
++L + +LL+++G M ++ +K + A + L + L
Sbjct: 794 LTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGL------L 847
Query: 542 NCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLD--FIRQ---VTAEAVI 596
+L+ G L ++V + ++ ++++A ++ +A I Q V +
Sbjct: 848 RSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIA 907
Query: 597 LQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDE 654
+K +L +L A RWEE+A L K E IIR +++I V LP++
Sbjct: 908 SSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQA 967
Query: 655 VQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 713
++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 968 LKEALTKAQAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLE 1018
Query: 714 KVINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1019 LQVLTAHSWREKASKTFLKKNSC 1041
Score = 147 (56.8 bits), Expect = 3.5e-47, Sum P(4) = 3.5e-47
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I +++ E+ + E AL+ S L L R L + + E+ +
Sbjct: 809 LPCAM--HQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQ 866
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L Q++ A+ W D V++ ++ ++ I +L A +D ++ LL +
Sbjct: 867 LQQQVEQAQ-WLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTI 925
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 926 AERWEEKAHFCLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDE 984
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 985 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1033
Score = 71 (30.1 bits), Expect = 2.5e-39, Sum P(4) = 2.5e-39
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 256 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTL-LREAEQFLWAGF----EMDAVRDMVNKLI 308
+ Q VEQ WL +V Q L S G+L + + + A +D R + +L+
Sbjct: 867 LQQQVEQAQWLD---EVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELL 923
Query: 309 E-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAE 367
RW E CL + P + E + + N +P + P L+
Sbjct: 924 TIAERWEEKAHFCLEARQKH---PPATLEAIIRETEN-------IPVHLPNIQALKEALT 973
Query: 368 EARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK 425
+A++ I +++ + + +LE L + LP+ + E +L ++ +A WR+ K
Sbjct: 974 KAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1033
Query: 426 CI--SNKCPAAIEI 437
N C +E+
Sbjct: 1034 TFLKKNSCYTLLEV 1047
Score = 63 (27.2 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1236 SLRARSML-YCICRKPYDEKAMIACYQCDEWYHIDCVK---LLSAPE 1278
SL A S C+C + ++ C C +W+H CV LL++P+
Sbjct: 1124 SLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1170
Score = 61 (26.5 bits), Expect = 2.0e-39, Sum P(4) = 2.0e-39
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1165 IQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAE 1222
+Q L G + SP D R +L EL I +W + A L++ E +I E
Sbjct: 896 MQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIRE 954
Query: 1223 GENLPVYL 1230
EN+PV+L
Sbjct: 955 TENIPVHL 962
Score = 58 (25.5 bits), Expect = 2.1e-47, Sum P(4) = 2.1e-47
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 946 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1005
IV G++ G+LQ + + + + S ++C+C + + + L C C
Sbjct: 1093 IVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAG-VGVLQCDLC 1151
Query: 1006 KDCYHLQCL 1014
+D +H QC+
Sbjct: 1152 QDWFHGQCV 1160
Score = 58 (25.5 bits), Expect = 2.0e-39, Sum P(4) = 2.0e-39
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 876 IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDK 935
IG++ +++ + +Q + + L S L+ L E G+ + PE ++ +V++
Sbjct: 816 IGDVKDVLEQVEAYQAEAREA--LATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQ 873
Query: 936 VENWKQRCKEIVGTSVGDKNSLL---GLL 961
+ W K+ + S + SL+ GLL
Sbjct: 874 AQ-WLDEVKQALAPSA-HRGSLVIMQGLL 900
Score = 52 (23.4 bits), Expect = 2.1e-47, Sum P(4) = 2.1e-47
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 1153 LLEG-LTKPTIGQIQNYLKEGLLMNISPKDHYR-QKLMELNRIGSQWADVAKKVVLDSGA 1210
++EG L + T+ + N+ LL P D R + L+EL + Q + + A
Sbjct: 1346 MMEGDLLEVTLDE--NHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSR------A 1397
Query: 1211 LSLDKVFELIAEGENLPVYLEKELKSLRARS--MLYCICRKP--YDEKA 1255
L + + + +G N+ +++EL+S RARS ++ + R+ Y EKA
Sbjct: 1398 LERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKA 1446
Score = 51 (23.0 bits), Expect = 2.9e-37, Sum P(4) = 2.9e-37
Identities = 46/212 (21%), Positives = 79/212 (37%)
Query: 761 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLMA----V 813
+ S G LG + E +LQ W K+AL+ + SL ++ L+ +
Sbjct: 847 LRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKI 906
Query: 814 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 873
A S + L L +W ++A + A K L E ++ + I P
Sbjct: 907 ASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATL---EAIIRETENIPVHLP 963
Query: 874 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 930
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 964 N-IQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1018
Query: 931 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 962
+V +W+++ + T + KNS LL+
Sbjct: 1019 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1046
Score = 48 (22.0 bits), Expect = 2.7e-38, Sum P(4) = 2.7e-38
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNC 543
L+T+ LL L V +PE E L+ AI W R L + +++
Sbjct: 1201 LETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALAS-----------EDVTA 1249
Query: 544 ILKEGASLRIQVDDLPLVE 562
+L++ A LR Q+ P E
Sbjct: 1250 LLRQLAELRQQLQAKPRPE 1268
Score = 48 (22.0 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 994 LDDLEGLVAVGRDLPVGLE-ELRQL 1017
Score = 48 (22.0 bits), Expect = 2.0e-35, Sum P(4) = 2.0e-35
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 399 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 435
LP+ + E E L A W+D RK ++++ A+
Sbjct: 1214 LPVRLPEGEALQCLTERAIGWQDRARKALASEDVTAL 1250
Score = 45 (20.9 bits), Expect = 7.7e-46, Sum P(4) = 7.7e-46
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 737
RLE++ L+ + L + L E L+ + WQ+ A L +D LL
Sbjct: 1200 RLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALL 1251
Score = 43 (20.2 bits), Expect = 2.0e-35, Sum P(4) = 2.0e-35
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 342 CVNELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASG 398
C ELLG +PG +I+ + +E ++Q + SA K S L +S
Sbjct: 1074 CDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLAPSLMASSP 1130
Query: 399 LPICI 403
IC+
Sbjct: 1131 TSICV 1135
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 424 (154.3 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 97/248 (39%), Positives = 136/248 (54%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ + P+LF +QPDLL QLVT++NP++L+ N VPV+ Q G FVITFPR+YHAGFN G
Sbjct: 672 MKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQG 731
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNFAPADWL G + Y + V SH+EL+C +A + L ++
Sbjct: 732 YNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYI 791
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ R+ L G+ ++ R+ E V +E C C +LSAVAC C
Sbjct: 792 DMAEMVDTEKKLRKSLLEWGVTRAE----RRAFELVNDDERH-CQECNTTCFLSAVACEC 846
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISS 238
VCL H+ LC C K L+YR+TL E+ L L + R I
Sbjct: 847 NDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEM-PLMLQKLKVKAHSFERWLSRCRDIVD 905
Query: 239 SNRPTTLT 246
++ PT++T
Sbjct: 906 AHTPTSVT 913
Score = 150 (57.9 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 75/351 (21%), Positives = 153/351 (43%)
Query: 407 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 466
+KL + S + W R + P ++ + L +L EA K P + +L+ +
Sbjct: 884 QKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKF--PSS-LLIDRLNA 940
Query: 467 AESCRARCSEALR--GSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWI---ARL 521
A +C ++ G ++T QE + + M ELEL Q + I A +
Sbjct: 941 AAVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV 1000
Query: 522 NDILVN----INGRKDQHNVI------DELNCILKEGASLRIQVDDLPLVEVELK--KAH 569
++LV + + Q + EL ++ EG+SLRI++ L L++ LK K +
Sbjct: 1001 RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLLQKRLKQCKWY 1060
Query: 570 CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFID-----LSGVLAAAMRWEERAAD 624
R + L+ +K+ ++ + A ++ ++D L + A WE +AA
Sbjct: 1061 KRSQGLRETSSKLTYQDVKNLLHIAAA-DLDPTDPYVDKEMRKLQQIGADIEAWESQAAK 1119
Query: 625 I---LIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 681
L + ++ E E ++++ DI +PS +++ + A+ WL+ E +
Sbjct: 1120 YFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTY- 1178
Query: 682 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ-NHASSLLQ 731
C +L+ ++ + + I L+E + ++ +N+ +W+ N A + L+
Sbjct: 1179 --C-----HTLEAMIERGLNIPIQLEELSRMQGHLNSAHQWKDNTACAFLK 1222
Score = 99 (39.9 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 61/229 (26%), Positives = 100/229 (43%)
Query: 360 LIL-QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKV 418
L+L + + E + S +Q +L + + SELE L + S L I + + + L +R+ K
Sbjct: 1004 LVLGKQFVERSESQLQ---LSLESLEE-SELETLINEGSSLRIELQQLDLLQKRLKQCKW 1059
Query: 419 WRDS--VRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDM---LLKMIG---QA-ES 469
++ S +R+ S+K DV L A DL P D L+ IG +A ES
Sbjct: 1060 YKRSQGLRET-SSKLTYQ---DVKNLLHIAAADLDPTDPYVDKEMRKLQQIGADIEAWES 1115
Query: 470 CRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 529
A+ L L +E L+ D +P LLK A W+ + + N N
Sbjct: 1116 QAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQN-N 1174
Query: 530 GRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKAC 578
H L +++ G ++ IQ+++L ++ L AH + K AC
Sbjct: 1175 HVTYCHT----LEAMIERGLNIPIQLEELSRMQGHLNSAH-QWKDNTAC 1218
Score = 90 (36.7 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
Identities = 71/324 (21%), Positives = 131/324 (40%)
Query: 637 DIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELF-LASAFAVAPASC-------SLLR 688
DI+ A V L L E+ E T K +S L +A AV C + +
Sbjct: 902 DIVDAHTPTSVTLQELQELCKEAETKK--FPSSLLIDRLNAAAVEAEKCVTVIQQLGINK 959
Query: 689 LESLKDLVSQSKFLKISLKE-QTELEKVINNCERWQNHAS--SLLQDARCLLDKDDIGDG 745
+ + D ++ K++++E + ++++ N C AS LL + +++ +
Sbjct: 960 VRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERSE--SQ 1017
Query: 746 LSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSL- 804
L SL S +E+ + +E+ N G SL + ++ LQ W K++ S L
Sbjct: 1018 LQLSLES-LEE--SELETLINEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLT 1074
Query: 805 -EDVESLMAVAEG-LSTRCFSSMLWNSLIHGVKWLKRALEVI-SAPCK-FKRC----KLS 856
+DV++L+ +A L + + + ++ + +E S K F+R +L
Sbjct: 1075 YQDVKNLLHIAAADLDP---TDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHELG 1131
Query: 857 DVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELG 916
++E+ L IN P G L A++K + W V Q +L + E G
Sbjct: 1132 EIEQFLKSASDINGQVPSH-GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMI-ERG 1189
Query: 917 EAAAFDCPELEKVLSKVDKVENWK 940
EL ++ ++ WK
Sbjct: 1190 LNIPIQLEELSRMQGHLNSAHQWK 1213
Score = 88 (36.0 bits), Expect = 2.4e-40, Sum P(4) = 2.4e-40
Identities = 59/273 (21%), Positives = 112/273 (41%)
Query: 386 ISELELLYSRASGLPICIV-ESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLE 444
+ ELEL L CI+ E + + + K + + + + +E L L
Sbjct: 977 MEELELFVQEIDNL-CCIIDEGASVRELLVLGKQFVERSESQLQLSLES-LEESELETLI 1034
Query: 445 SEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVE----LLLQELGDFTVN 500
+E L+I++ + D+L K + Q + + S+ LR + S T + LL D
Sbjct: 1035 NEGSSLRIELQQLDLLQKRLKQCKWYKR--SQGLRETSSKLTYQDVKNLLHIAAADLDPT 1092
Query: 501 MP----ELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVD 556
P E+ L+Q +D W ++ + QH + E+ LK + + QV
Sbjct: 1093 DPYVDKEMRKLQQIGADIEAWESQAAKYFRRLT---QQHE-LGEIEQFLKSASDINGQVP 1148
Query: 557 DLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVI-----LQIEREKLFIDLSGV 611
L++ L+KA +A++ + + T EA+I + I+ E+L + G
Sbjct: 1149 SHGLLKDALRKAREWLRAVEQLQQNNHVTYCH--TLEAMIERGLNIPIQLEELS-RMQGH 1205
Query: 612 LAAAMRWEERAADILIHKAQMCEFEDIIRASQD 644
L +A +W++ A + K +++ D
Sbjct: 1206 LNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSD 1238
Score = 77 (32.2 bits), Expect = 9.2e-47, Sum P(4) = 9.2e-47
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 1221 AEGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA 1276
AE + L E +++ M ++C+C+ + M C C +W+H DCV SA
Sbjct: 1270 AEEQELLDMRELRRQNMNKNPMRDMFCLCKSEF-RNLMFNCQLCRDWFHEDCVPPPSA 1326
Score = 74 (31.1 bits), Expect = 3.1e-39, Sum P(5) = 3.1e-39
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 357 PGHLILQNYAEEARSLIQEINAALSACSKIS---ELELLYSRASGLPICIVESEKLSQRI 413
P H +L++ +AR ++ + L + ++ LE + R +PI + E ++ +
Sbjct: 1148 PSHGLLKDALRKAREWLRAVEQ-LQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHL 1206
Query: 414 SSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDV-PE-TDMLLKMIGQAE 468
+SA W+D+ K ++VL S+A+++ D+ P D LK AE
Sbjct: 1207 NSAHQWKDNTACAFLKKGTFYTLLEVLMP-RSDAINIDSDLKPRFQDDFLKEKNPAE 1262
Score = 67 (28.6 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL----LSAPEIYICAAC 1285
C KP + + C C+EW+H+ CV L + + YIC C
Sbjct: 1761 CHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 65 (27.9 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 1146 WRVRVSKLLEGLTKP-TIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKV 1204
W + +K LT+ +G+I+ +LK +N H L + R +W +++
Sbjct: 1113 WESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH--GLLKDALRKAREWLRAVEQL 1170
Query: 1205 VLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1238
++ + +I G N+P+ LE EL ++
Sbjct: 1171 QQNNHVTYCHTLEAMIERGLNIPIQLE-ELSRMQ 1203
Score = 60 (26.2 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLRP 1016
C+C +S+ + L F C C+D +H C+ P
Sbjct: 1296 CLC-KSEFRNLMFN-CQLCRDWFHEDCVPP 1323
Score = 55 (24.4 bits), Expect = 2.8e-44, Sum P(4) = 2.8e-44
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 989 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + +E++++ C C + +H+ C+ + YIC C
Sbjct: 1761 CHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 54 (24.1 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 653 DEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL------ESLKDLVSQSKFLKISL 706
DE + + + N E +A A + + LL+L E+L DL+ + L++SL
Sbjct: 1460 DEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDSEIENLLDLMMEGDLLEVSL 1519
Query: 707 KEQTELEKVI 716
E EL +++
Sbjct: 1520 DETQELWRIL 1529
Score = 52 (23.4 bits), Expect = 2.2e-41, Sum P(4) = 2.2e-41
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 730
RLE++ L+ Q + L I L E L + WQ+ A L
Sbjct: 1358 RLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL 1400
Score = 51 (23.0 bits), Expect = 7.2e-36, Sum P(5) = 7.2e-36
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 399 LPICIVESEKLSQRISSAKVWRDSVRKCISN 429
LPI + E E L A W+D RK +S+
Sbjct: 1372 LPIRLPEDEALRCLAERAMNWQDRARKALSS 1402
Score = 48 (22.0 bits), Expect = 3.1e-39, Sum P(5) = 3.1e-39
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 474 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 525
C +R L+T+ LL +L + +PE E L+ A+ W R L
Sbjct: 1348 CPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL 1400
Score = 43 (20.2 bits), Expect = 9.2e-47, Sum P(4) = 9.2e-47
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 1283 AACKPQAEESSTPQNVDGGRTNAEF------LEPKTPSPKHTNSRKK 1323
A+ P A+ + + +GG TN+ TP+P T+ ++K
Sbjct: 1643 ASTTPGADADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRK 1689
Score = 43 (20.2 bits), Expect = 3.0e-35, Sum P(3) = 3.0e-35
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 236 ISSSNRPT---TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSD 278
ISS +P +LTK+ G + + + C L++++ FS+D
Sbjct: 1431 ISSPRKPRRRGSLTKEASGSTESDADDDDDEDECRLRIVEDNFSND 1476
Score = 41 (19.5 bits), Expect = 1.6e-45, Sum P(4) = 1.6e-45
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 908 LMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGT 949
L++QL++L PE E + ++ NW+ R ++ + +
Sbjct: 1365 LLVQLQQL----PIRLPEDEALRCLAERAMNWQDRARKALSS 1402
Score = 38 (18.4 bits), Expect = 7.2e-36, Sum P(5) = 7.2e-36
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 260 VEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGI-R 318
+E W S + K + L G E EQFL + + I G+ + G+ +
Sbjct: 1110 IEAWESQAAKYFRRLTQQHELG----EIEQFLKSASD-----------INGQVPSHGLLK 1154
Query: 319 DCLHKAENW 327
D L KA W
Sbjct: 1155 DALRKAREW 1163
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 435 (158.2 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 92/213 (43%), Positives = 132/213 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 539 MKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 598
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 599 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHK 658
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KG+ ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 659 EMFIMVQEERRLRKALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 713
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P VCL H LC+C + + +L YR+TL EL
Sbjct: 714 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 746
Score = 149 (57.5 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 82/383 (21%), Positives = 159/383 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 721 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 776
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGS-------- 481
+ L LESEA + + P +++L ++ + + E+C A+ + G
Sbjct: 777 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 834
Query: 482 MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDEL 541
++L + +LL+++G M ++ +K + A + L + L
Sbjct: 835 LTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGL------L 888
Query: 542 NCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLD--FIRQ---VTAEAVI 596
+L+ G L ++V + ++ ++++A ++ +A I Q V +
Sbjct: 889 RSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIA 948
Query: 597 LQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDE 654
+K +L +L A RWEE+A L K E IIR +++I V LP++
Sbjct: 949 SSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQA 1008
Query: 655 VQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 713
++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1009 LKEALTKAQAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLE 1059
Query: 714 KVINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1060 LQVLTAHSWREKASKTFLKKNSC 1082
Score = 147 (56.8 bits), Expect = 4.5e-47, Sum P(4) = 4.5e-47
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I +++ E+ + E AL+ S L L R L + + E+ +
Sbjct: 850 LPCAM--HQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQ 907
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L Q++ A+ W D V++ ++ ++ I +L A +D ++ LL +
Sbjct: 908 LQQQVEQAQ-WLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTI 966
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 967 AERWEEKAHFCLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDE 1025
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1026 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1074
Score = 71 (30.1 bits), Expect = 3.2e-39, Sum P(4) = 3.2e-39
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 256 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTL-LREAEQFLWAGF----EMDAVRDMVNKLI 308
+ Q VEQ WL +V Q L S G+L + + + A +D R + +L+
Sbjct: 908 LQQQVEQAQWLD---EVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELL 964
Query: 309 E-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAE 367
RW E CL + P + E + + N +P + P L+
Sbjct: 965 TIAERWEEKAHFCLEARQKH---PPATLEAIIRETEN-------IPVHLPNIQALKEALT 1014
Query: 368 EARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK 425
+A++ I +++ + + +LE L + LP+ + E +L ++ +A WR+ K
Sbjct: 1015 KAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1074
Query: 426 CI--SNKCPAAIEI 437
N C +E+
Sbjct: 1075 TFLKKNSCYTLLEV 1088
Score = 63 (27.2 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1236 SLRARSML-YCICRKPYDEKAMIACYQCDEWYHIDCVK---LLSAPE 1278
SL A S C+C + ++ C C +W+H CV LL++P+
Sbjct: 1165 SLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1211
Score = 61 (26.5 bits), Expect = 2.6e-39, Sum P(4) = 2.6e-39
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1165 IQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAE 1222
+Q L G + SP D R +L EL I +W + A L++ E +I E
Sbjct: 937 MQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIRE 995
Query: 1223 GENLPVYL 1230
EN+PV+L
Sbjct: 996 TENIPVHL 1003
Score = 58 (25.5 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 946 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1005
IV G++ G+LQ + + + + S ++C+C + + + L C C
Sbjct: 1134 IVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAG-VGVLQCDLC 1192
Query: 1006 KDCYHLQCL 1014
+D +H QC+
Sbjct: 1193 QDWFHGQCV 1201
Score = 58 (25.5 bits), Expect = 2.6e-39, Sum P(4) = 2.6e-39
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 876 IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDK 935
IG++ +++ + +Q + + L S L+ L E G+ + PE ++ +V++
Sbjct: 857 IGDVKDVLEQVEAYQAEAREA--LATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQ 914
Query: 936 VENWKQRCKEIVGTSVGDKNSLL---GLL 961
+ W K+ + S + SL+ GLL
Sbjct: 915 AQ-WLDEVKQALAPSA-HRGSLVIMQGLL 941
Score = 52 (23.4 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 1153 LLEG-LTKPTIGQIQNYLKEGLLMNISPKDHYR-QKLMELNRIGSQWADVAKKVVLDSGA 1210
++EG L + T+ + N+ LL P D R + L+EL + Q + + A
Sbjct: 1387 MMEGDLLEVTLDE--NHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSR------A 1438
Query: 1211 LSLDKVFELIAEGENLPVYLEKELKSLRARS--MLYCICRKP--YDEKA 1255
L + + + +G N+ +++EL+S RARS ++ + R+ Y EKA
Sbjct: 1439 LERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKA 1487
Score = 51 (23.0 bits), Expect = 3.7e-37, Sum P(4) = 3.7e-37
Identities = 46/212 (21%), Positives = 79/212 (37%)
Query: 761 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLMA----V 813
+ S G LG + E +LQ W K+AL+ + SL ++ L+ +
Sbjct: 888 LRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKI 947
Query: 814 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 873
A S + L L +W ++A + A K L E ++ + I P
Sbjct: 948 ASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATL---EAIIRETENIPVHLP 1004
Query: 874 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 930
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1005 N-IQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1059
Query: 931 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 962
+V +W+++ + T + KNS LL+
Sbjct: 1060 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1087
Score = 48 (22.0 bits), Expect = 3.5e-38, Sum P(4) = 3.5e-38
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNC 543
L+T+ LL L V +PE E L+ AI W R L + +++
Sbjct: 1242 LETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALAS-----------EDVTA 1290
Query: 544 ILKEGASLRIQVDDLPLVE 562
+L++ A LR Q+ P E
Sbjct: 1291 LLRQLAELRQQLQAKPRPE 1309
Score = 48 (22.0 bits), Expect = 5.6e-38, Sum P(4) = 5.6e-38
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1035 LDDLEGLVAVGRDLPVGLE-ELRQL 1058
Score = 48 (22.0 bits), Expect = 2.7e-35, Sum P(4) = 2.7e-35
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 399 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 435
LP+ + E E L A W+D RK ++++ A+
Sbjct: 1255 LPVRLPEGEALQCLTERAIGWQDRARKALASEDVTAL 1291
Score = 45 (20.9 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 737
RLE++ L+ + L + L E L+ + WQ+ A L +D LL
Sbjct: 1241 RLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALL 1292
Score = 43 (20.2 bits), Expect = 2.7e-35, Sum P(4) = 2.7e-35
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 342 CVNELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASG 398
C ELLG +PG +I+ + +E ++Q + SA K S L +S
Sbjct: 1115 CDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLAPSLMASSP 1171
Query: 399 LPICI 403
IC+
Sbjct: 1172 TSICV 1176
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 422 (153.6 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 93/220 (42%), Positives = 129/220 (58%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C + L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 148 (57.2 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 96/409 (23%), Positives = 181/409 (44%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 516
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 517 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 570
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 571 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 627 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD--- 738
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLS 1075
Query: 739 -KDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHE-ISELQNA 784
+ DIG G + K++++I E + L D E + E ++A
Sbjct: 1076 PRTDIGVYGSGKNRRKKVKEIIEK-EKEKDLDLEPLSDLEEGLEETRDA 1123
Score = 78 (32.5 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1292
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDS 1666
Score = 77 (32.2 bits), Expect = 3.6e-47, Sum P(3) = 3.6e-47
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNGCVPL 1191
Score = 77 (32.2 bits), Expect = 4.9e-40, Sum P(4) = 4.9e-40
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 66 (28.3 bits), Expect = 6.6e-39, Sum P(4) = 6.6e-39
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 4.7e-34, Sum P(3) = 4.7e-34
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1314 SPKHT 1318
S HT
Sbjct: 1067 S--HT 1069
Score = 56 (24.8 bits), Expect = 4.8e-37, Sum P(4) = 4.8e-37
Identities = 79/385 (20%), Positives = 146/385 (37%)
Query: 362 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 416
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ W + + C+ + P + L + +EA ++ +P L + + +A A+
Sbjct: 953 ERWEEKAKVCLQAR-PRHSMAN-LENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEA 1010
Query: 477 ALRGS--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 534
GS L+ +E L + V + L ++ + A W R + N
Sbjct: 1011 IQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTL 1070
Query: 535 HNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA 592
V+ I G + R +V ++ +E E +K E D + L+ R
Sbjct: 1071 LQVLSPRTDIGVYGSGKNRRKKVKEI--IEKEKEKDLDLEPL---SDLEEGLEETRDAAM 1125
Query: 593 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL 652
+ + ERE+ I+ L AA + D I + + C I R + F++ L
Sbjct: 1126 VVAVFK-EREQKEIEAMHSLRAANLAKMTIVD-RIEEVKFC----ICRKTASGFMLQCEL 1179
Query: 653 --DEVQN---EISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKIS 705
D N + + S K S + P R LE++ L+ + L +
Sbjct: 1180 CKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLPVR 1239
Query: 706 LKEQTELEKVINNCERWQNHASSLL 730
L E L+ + WQ+ A L
Sbjct: 1240 LPEGEALQCLTERAMSWQDRARQAL 1264
Score = 50 (22.7 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1032
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLC 1215
Score = 47 (21.6 bits), Expect = 9.4e-37, Sum P(3) = 9.4e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 1.5e-46, Sum P(4) = 1.5e-46
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 907 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 42 (19.8 bits), Expect = 2.0e-36, Sum P(4) = 2.0e-36
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 880
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 881 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 928
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 4.0e-36, Sum P(4) = 4.0e-36
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 922 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 970
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 39 (18.8 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 47/245 (19%), Positives = 97/245 (39%)
Query: 778 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 833
++ELQ + W +KA L P S+ ++E+++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 834 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 893
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1057
Query: 894 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGD 953
+ F LK S +L+ L + + + + KV ++ K++ K++ + D
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRR--KKVKEIIE-KEKEKDLDLEPLSD 1112
Query: 954 KNSLLGLLQKIKQSV----HRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1008
L + V R H + L D +E++F IC
Sbjct: 1113 LEEGLEETRDAAMVVAVFKEREQKEIEAMHSLRAANLAKMTIVDRIEEVKFCICRKTASG 1172
Query: 1009 YHLQC 1013
+ LQC
Sbjct: 1173 FMLQC 1177
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 427 (155.4 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 93/213 (43%), Positives = 129/213 (60%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF+ QPDLL QLVT++NP++L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 583 MKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 642
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y+Q + V S EEL C +A LD ++ R
Sbjct: 643 YNFAEAVNFCTADWLPTGRSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLNLAAATHR 702
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L +GI ++ R+ E + +++ C C+ +LSA+AC
Sbjct: 703 EMFIIVQEERKLRKSLLERGIKEAE----REAFELL-PDDERQCDKCKTTCFLSALACSN 757
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P VCL H + LC C + KL+L YR+TL EL
Sbjct: 758 CPERLVCLYHAQDLCSCPSEKLYLRYRYTLDEL 790
Score = 158 (60.7 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 89/367 (24%), Positives = 153/367 (41%)
Query: 379 ALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEID 438
A CS SE L R + L + +L R S W + V++ + I+I
Sbjct: 768 AQDLCSCPSEKLYLRYRYT-LDELLAMLHRLKVRAESFDSWANRVKEALEQDEGNKIDIK 826
Query: 439 VLYKLESEALDLKIDVPETDMLLKMIG-QAESCRARCSEALRGSMSLKTVELLLQELGDF 497
L L+ EA D K E L + E C + +E L S S + L+ L D
Sbjct: 827 DLEVLKEEAADKKFPNNELLQRLNTVFVDIEKCESCSTELLSNSQSSRMTLKELKTLVDT 886
Query: 498 TVNMP-------ELELLKQYHSDAIFWIARLNDILVNINGRKDQHN---VIDELNCILKE 547
N+P E++L+ Q + + +R ++ + Q + V E+ +L+E
Sbjct: 887 MQNLPCVIKQQDEVQLILQKIEE---FDSRAQVLVDSTKSEWKQDSPLPVATEIQALLEE 943
Query: 548 GASLRIQVDDLPLVEVELKKAHCR---EKALKACDTKMPLDFIRQVTAEA--VILQIERE 602
GASL + L+ L++ + L +++ L +R + V + E
Sbjct: 944 GASLPVIAPACELLSGLLEQGRWLGEVRRTLGPEGSEVTLTVLRNLMESGCNVPQSVSVE 1003
Query: 603 KLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEIS 660
+L +L A RWEE+A L K + E I+ +Q I V LP++ +Q +S
Sbjct: 1004 TAMAELQELLTIAERWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLS 1063
Query: 661 TAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCE 720
A++W+ + E P C L+ L+ LV+ + L + ++E +LE + +
Sbjct: 1064 RARAWVTDLEEIQNGEHY--P--C----LDDLEGLVAIGRDLPVKMEELKQLELQVASAH 1115
Query: 721 RWQNHAS 727
W+ AS
Sbjct: 1116 SWREKAS 1122
Score = 83 (34.3 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 317 IRDCLHKAENW---SSLPGSDSEKVRLDCVNELLGFDPL-PCNEPGHLILQNYAEEARSL 372
+++ L AE W + + D +K L + ++ L P P L LQ AR+
Sbjct: 1009 LQELLTIAERWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARAW 1068
Query: 373 I---QEI-NAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
+ +EI N C + +LE L + LP+ + E ++L +++SA WR+ K
Sbjct: 1069 VTDLEEIQNGEHYPC--LDDLEGLVAIGRDLPVKMEELKQLELQVASAHSWREKASKTFL 1126
Query: 429 NKCPAAIEIDVLYKL--ESEALDLKIDVPETDMLLKMIG 465
K ++VL +S+ ++ V E D + ++G
Sbjct: 1127 KKNSQHSLLEVLCPCVEKSKKMEDNSMVTEADSDVNVLG 1165
Score = 82 (33.9 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 70/334 (20%), Positives = 136/334 (40%)
Query: 313 WAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYA--EEAR 370
WA +++ L + E + + D E ++ + ++ P NE + + E+
Sbjct: 807 WANRVKEALEQDEG-NKIDIKDLEVLKEEAADK-----KFPNNELLQRLNTVFVDIEKCE 860
Query: 371 SLIQEI-NAALSACSKISELELLYSRASGLPICIV----ESEKLSQRI----SSAKVWRD 421
S E+ + + S+ + EL+ L LP C++ E + + Q+I S A+V D
Sbjct: 861 SCSTELLSNSQSSRMTLKELKTLVDTMQNLP-CVIKQQDEVQLILQKIEEFDSRAQVLVD 919
Query: 422 SVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESC-RARCSEALRG 480
S + P + ++ LE E L + P ++L ++ Q R + G
Sbjct: 920 STKSEWKQDSPLPVATEIQALLE-EGASLPVIAPACELLSGLLEQGRWLGEVRRTLGPEG 978
Query: 481 SMSLKTVELLLQELGDFTVNMPELELLKQYHSDA--IFWIARLNDILVNINGRKDQHNVI 538
S TV L E G N+P+ ++ ++ + IA + I Q + +
Sbjct: 979 SEVTLTVLRNLMESG---CNVPQSVSVETAMAELQELLTIAERWEEKAQICLEDRQKHHL 1035
Query: 539 DELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDT--KMP-LDFIRQVTAEAV 595
L I+ E + +Q+ ++ ++ L +A L+ P LD + + A
Sbjct: 1036 STLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGR 1095
Query: 596 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHK 629
L ++ E+L L +A+A W E+A+ + K
Sbjct: 1096 DLPVKMEELK-QLELQVASAHSWREKASKTFLKK 1128
Score = 75 (31.5 bits), Expect = 4.5e-36, Sum P(3) = 4.5e-36
Identities = 52/227 (22%), Positives = 101/227 (44%)
Query: 1056 DLRMLIELLSDSEFFCRGIEAKDVLQEV-VDVALECKTCLTDIVK-FESCYLD-KDLHVI 1112
DL +L E +D +F E L V VD+ +C++C T+++ +S + K+L +
Sbjct: 827 DLEVLKEEAADKKF--PNNELLQRLNTVFVDIE-KCESCSTELLSNSQSSRMTLKELKTL 883
Query: 1113 SN---KLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYL 1169
+ L +K ++ + Q D + A+ L S+ + P +IQ L
Sbjct: 884 VDTMQNLPCVIKQQDEVQLI-LQKIEEFD-SRAQVLVDSTKSEWKQDSPLPVATEIQALL 941
Query: 1170 KEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGA-LSLDKVFELIAEGENLP 1227
+EG L I+P L+E R W ++ + G+ ++L + L+ G N+P
Sbjct: 942 EEGASLPVIAPACELLSGLLEQGR----WLGEVRRTLGPEGSEVTLTVLRNLMESGCNVP 997
Query: 1228 VYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLL 1274
+ E + +L I + ++EKA I C + + +H+ ++ +
Sbjct: 998 QSVSVETAMAELQELL-TIAER-WEEKAQI-CLEDRQKHHLSTLEAI 1041
Score = 74 (31.1 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 60/292 (20%), Positives = 121/292 (41%)
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGD 744
S + L+ LK LV + L +K+Q E++ ++ E + + A L+ + K D
Sbjct: 873 SRMTLKELKTLVDTMQNLPCVIKQQDEVQLILQKIEEFDSRAQVLVDSTKSEW-KQDSPL 931
Query: 745 GLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSL 804
++ + + +E+ + A C L G + L TL ++ L+V +L
Sbjct: 932 PVATEIQALLEEGASLPVIAPACELLSGL-LEQGRWLGEVRRTLGPEGSEVT-LTVLRNL 989
Query: 805 EDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCK--LSDVEEVL 862
+ES V + +S + L L +W ++A ++ C R K LS +E ++
Sbjct: 990 --MESGCNVPQSVSVETAMAELQELLTIAERWEEKA-QI----CLEDRQKHHLSTLEAIV 1042
Query: 863 AGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAA 919
+ I P ++ L + + + + W + + N C L+ +G
Sbjct: 1043 NEAQLIPVQLPNILS-LQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVA----IGRDL 1097
Query: 920 AFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 971
EL+++ +V +W+++ + T + KNS LL+ + V +S
Sbjct: 1098 PVKMEELKQLELQVASAHSWREKASK---TFL-KKNSQHSLLEVLCPCVEKS 1145
Score = 63 (27.2 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 399 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIE-IDVLYKLESEALDLKIDVPET 457
LP+ + E E L A W+ ++ + P E +D L ++E E + +K + PE
Sbjct: 1332 LPVRLPEGEALQCLTERAINWQGRAKQALDT--PEVQEALDRLQQVEDEMVSIKEEEPEE 1389
Query: 458 DMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 517
K G A + EA G + L E G+ + E + S
Sbjct: 1390 KK--KWNGDAVIVLSDSEEAEDGVIDLT-------EDGN-SPKKNERNAVNGTQSGCENG 1439
Query: 518 IARLNDILVNINGRKDQHNVIDELNC-ILKEGASLRIQVDDLPL----VEVELKKAHCRE 572
I R + + G + +++ L +++ S+R Q+++L L +EV L + H
Sbjct: 1440 IGRKSSAH-EVTGVESLLSLVPSLKGPVVELNTSVRAQLEELQLEGDLLEVTLDQTHAIY 1498
Query: 573 KALKACDTKMPLDFIRQVTAEAVILQIER 601
+ L+A ++ P D +R T + LQ +R
Sbjct: 1499 RILQA-SSQPPQDTLR--TLIQIELQEQR 1524
Score = 62 (26.9 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1241 SMLYCICRKPYDEKAMIACYQCDEWYHIDCV 1271
S CIC P + C+ C +W+H CV
Sbjct: 1251 SQTVCICGGP-PRPLLHRCHLCKDWFHGGCV 1280
Score = 57 (25.1 bits), Expect = 2.5e-36, Sum P(4) = 2.5e-36
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 1141 LARNLWRVRVSKLL--EGLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQW 1197
L + W V + L EG ++ T+ ++N ++ G + S + +L EL I +W
Sbjct: 961 LEQGRWLGEVRRTLGPEG-SEVTLTVLRNLMESGCNVPQSVSVETAMAELQELLTIAERW 1019
Query: 1198 ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRA 1239
+ A+ + D L + ++ E + +PV L L SL+A
Sbjct: 1020 EEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNIL-SLQA 1060
Score = 53 (23.7 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 24/78 (30%), Positives = 33/78 (42%)
Query: 473 RCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL--VNING 530
RC + R L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1310 RCQRSRRPR--LETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAKQALDTPEVQE 1367
Query: 531 RKDQ-HNVIDELNCILKE 547
D+ V DE+ I +E
Sbjct: 1368 ALDRLQQVEDEMVSIKEE 1385
Score = 51 (23.0 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 20/101 (19%), Positives = 41/101 (40%)
Query: 871 SFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS---WSLMLQLKELGEAAAFDCPELE 927
SFP ++ + + K W + +F +C + +L L + PE E
Sbjct: 1281 SFPPLLATSDTHLTKPLCWWDWNTRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGE 1340
Query: 928 KVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 968
+ ++ NW+ R K+ + T + L LQ+++ +
Sbjct: 1341 ALQCLTERAINWQGRAKQALDTP--EVQEALDRLQQVEDEM 1379
Score = 51 (23.0 bits), Expect = 1.1e-35, Sum P(4) = 1.1e-35
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNIS-PKDHYRQKLMELNRIGSQWADVAKKV 1204
W + LE K + ++ + E L+ + P Q + R W +++
Sbjct: 1019 WEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARA---WVTDLEEI 1075
Query: 1205 VLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV +E ELK L
Sbjct: 1076 QNGEHYPCLDDLEGLVAIGRDLPVKME-ELKQL 1107
Score = 47 (21.6 bits), Expect = 9.3e-46, Sum P(3) = 9.3e-46
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 983 SMTLCMCCESDSKELEFLICSACKDCYHLQCL 1014
S T+C+C L C CKD +H C+
Sbjct: 1251 SQTVCICGGPPRPLLHR--CHLCKDWFHGGCV 1280
Score = 45 (20.9 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 920 AFDCPELEKVLSKVDKVENWKQRCKE 945
A D PE+++ L ++ +VE+ KE
Sbjct: 1359 ALDTPEVQEALDRLQQVEDEMVSIKE 1384
Score = 43 (20.2 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 730
RLE++ L+ + L + L E L+ + WQ A L
Sbjct: 1318 RLETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAKQAL 1360
Score = 43 (20.2 bits), Expect = 2.5e-36, Sum P(4) = 2.5e-36
Identities = 23/100 (23%), Positives = 42/100 (42%)
Query: 901 CAQQSWSLMLQLK-ELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLG 959
C+ S L L+ + L E A L ++ + + ++W R KE + G+K +
Sbjct: 772 CSCPSEKLYLRYRYTLDELLAM----LHRLKVRAESFDSWANRVKEALEQDEGNKIDIKD 827
Query: 960 LLQKIKQSVHRSLYIYNKPHGSVSMTLCMC--CESDSKEL 997
L + +K+ + N+ ++ CES S EL
Sbjct: 828 L-EVLKEEAADKKFPNNELLQRLNTVFVDIEKCESCSTEL 866
Score = 42 (19.8 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 12/59 (20%), Positives = 28/59 (47%)
Query: 358 GHLILQNYAEEARSLI---QEINAALSACSKISELELLYSRASGLPICIVESEKLSQRI 413
G +++Y + R + +E+ ++AC + +L L + + I + E KL + +
Sbjct: 660 GRSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKLRKSL 718
Score = 37 (18.1 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1356 WHNR--KPFRRAAKKRTVLDSLCPFI 1379
W + K F + + ++L+ LCP +
Sbjct: 1117 WREKASKTFLKKNSQHSLLEVLCPCV 1142
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 422 (153.6 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 93/220 (42%), Positives = 129/220 (58%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C + L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 144 (55.7 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 89/382 (23%), Positives = 171/382 (44%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 516
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 517 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 570
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 571 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 627 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + M E+I+ +++I LP++ ++ + A+ W E A+ +
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGN- 1015
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD--- 738
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLS 1075
Query: 739 -KDDIGD-GLSNSLVSKIEQLI 758
+ DIG G + K++++I
Sbjct: 1076 PRTDIGVYGSGKNRRKKVKEII 1097
Score = 78 (32.5 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1292
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSAEMAENEDYICINCAKKQGPDS 1666
Score = 78 (32.5 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 76 (31.8 bits), Expect = 3.0e-40, Sum P(4) = 3.0e-40
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 359 HLILQNYAEEARSLIQEINAALSA--CSKISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 64 (27.6 bits), Expect = 5.2e-39, Sum P(4) = 5.2e-39
Identities = 46/271 (16%), Positives = 124/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ + L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 59 (25.8 bits), Expect = 4.8e-37, Sum P(4) = 4.8e-37
Identities = 50/220 (22%), Positives = 93/220 (42%)
Query: 1054 RSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTC--LTDIV--KFESCYLDKDL 1109
+ DL L +L D+E R D+ +++ D E +TC + ++ K + D
Sbjct: 757 KKDLIELRVMLEDAED--RKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHRQSSDS 814
Query: 1110 HVISNKLTIT-LKA--REAAGV-----FDRQSNSALDFALARNLWRVRVSKLLEGLTKPT 1161
KLT+ LKA ++ + RQ + LD + R + + T P
Sbjct: 815 GKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDV---EEFHERAQEAMMDET-PD 870
Query: 1162 IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIA 1221
++Q + G + + + R K EL + ++W D + + D ++LD + +LI
Sbjct: 871 SSKLQMLIDMGSSLYVELPELPRLK-QELQQ--ARWLDEVRLTLSDPQQVTLDVMKKLID 927
Query: 1222 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ 1261
G L + E K++ L + + ++EKA + C Q
Sbjct: 928 SGVGLAPHHAVE-KAMAELQELLTVSER-WEEKAKV-CLQ 964
Score = 58 (25.5 bits), Expect = 3.7e-34, Sum P(3) = 3.7e-34
Identities = 33/136 (24%), Positives = 56/136 (41%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYC 1245
+L EL + +W + AK + S+ + ++ E +N+P +L L SL+
Sbjct: 944 ELQELLTVSERWEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA----- 997
Query: 1246 ICRKPYDEKAMIACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGR 1302
+K + A + Q Y +++ ++ LSA I + PQ E R
Sbjct: 998 -LQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRER 1056
Query: 1303 TNAEFLEPKTPSPKHT 1318
T FL+ K S HT
Sbjct: 1057 TGRTFLK-KNSS--HT 1069
Score = 56 (24.8 bits), Expect = 9.7e-37, Sum P(4) = 9.7e-37
Identities = 84/387 (21%), Positives = 152/387 (39%)
Query: 362 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 416
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRHSMAN-LENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 477 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 532
A++ + +E L + L +P L+ L Q S A W R + N
Sbjct: 1010 AIQSGNNYAYLEQL-ESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 533 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 590
V+ I G + R +V ++ +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEI--IEKEKEKDLDLEPL---SDLEEGLEESRD- 1122
Query: 591 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 650
TA V + ERE+ I+ L AA A ++ + + +F I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAA----NLAKMTIVERIEEVKF-CICRKTASGFMLQC 1177
Query: 651 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 703
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 704 ISLKEQTELEKVINNCERWQNHASSLL 730
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDKARQAL 1264
Score = 53 (23.7 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1032
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLC 1215
Score = 48 (22.0 bits), Expect = 7.4e-37, Sum P(3) = 7.4e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDKARQALA 1265
Score = 42 (19.8 bits), Expect = 9.7e-37, Sum P(4) = 9.7e-37
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 880
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 881 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 928
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 878
Score = 39 (18.8 bits), Expect = 7.9e-46, Sum P(4) = 7.9e-46
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 907 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
SL++ L++L PE E + ++ +W+ + ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDKARQALATD--ELSSALAKLSVLSQ 1281
Score = 39 (18.8 bits), Expect = 4.8e-37, Sum P(4) = 4.8e-37
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 922 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 970
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 38 (18.4 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 995 KELEFLICSACKDCYHLQC 1013
+E++F IC + LQC
Sbjct: 1159 EEVKFCICRKTASGFMLQC 1177
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 425 (154.7 bits), Expect = 4.4e-47, Sum P(4) = 4.4e-47
Identities = 94/220 (42%), Positives = 130/220 (59%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C +K L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 139 (54.0 bits), Expect = 4.4e-47, Sum P(4) = 4.4e-47
Identities = 88/380 (23%), Positives = 171/380 (45%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 520
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 521 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 572
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 905
Query: 573 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 628
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 906 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 965
Query: 629 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 686
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 1017
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----K 739
LE L+ L ++ + + + L+ ++E + W+ + L+ + LL +
Sbjct: 1018 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPR 1077
Query: 740 DDIGD-GLSNSLVSKIEQLI 758
DIG G + K+++LI
Sbjct: 1078 TDIGVYGSGKNRRKKVKELI 1097
Score = 78 (32.5 bits), Expect = 4.4e-47, Sum P(4) = 4.4e-47
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1295
C++P +K + C CDEW+H CV + ++ E YIC C K Q S P
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPVSPGP 1669
Score = 78 (32.5 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 78 (32.5 bits), Expect = 8.9e-41, Sum P(4) = 8.9e-41
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 990
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 1050
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 6.0e-40, Sum P(4) = 6.0e-40
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 992
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 1051
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 70 (29.7 bits), Expect = 8.2e-39, Sum P(4) = 8.2e-39
Identities = 87/387 (22%), Positives = 151/387 (39%)
Query: 362 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 416
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 477 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 532
A++ + +E L + L +P LE L Q S A W R + N
Sbjct: 1010 AIQSGSNYAYLEQL-ESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 533 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 590
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD- 1122
Query: 591 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 650
TA V + ERE+ I+ L AA + D I + + C I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQC 1177
Query: 651 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 703
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 704 ISLKEQTELEKVINNCERWQNHASSLL 730
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDRARQAL 1264
Score = 62 (26.9 bits), Expect = 6.4e-36, Sum P(2) = 6.4e-36
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 897
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1314 SPKHT 1318
S HT
Sbjct: 1067 S--HT 1069
Score = 53 (23.7 bits), Expect = 4.4e-47, Sum P(4) = 4.4e-47
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1032
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 47 (21.6 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 6.0e-46, Sum P(4) = 6.0e-46
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 907 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 41 (19.5 bits), Expect = 1.9e-36, Sum P(3) = 1.9e-36
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 778 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 833
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 834 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 893
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLEA-LPQVESQVAAARAWRERT 1057
Query: 894 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 951
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1115
Query: 952 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1008
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1116 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1172
Query: 1009 YHLQC 1013
+ LQC
Sbjct: 1173 FMLQC 1177
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 425 (154.7 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 94/220 (42%), Positives = 130/220 (59%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C +K L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 139 (54.0 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 88/380 (23%), Positives = 171/380 (45%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 520
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 521 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 572
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 905
Query: 573 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 628
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 906 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 965
Query: 629 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 686
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 1017
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----K 739
LE L+ L ++ + + + L+ ++E + W+ + L+ + LL +
Sbjct: 1018 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPR 1077
Query: 740 DDIGD-GLSNSLVSKIEQLI 758
DIG G + K+++LI
Sbjct: 1078 TDIGVYGSGKNRRKKVKELI 1097
Score = 78 (32.5 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 78 (32.5 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 990
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 1050
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 992
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 1051
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 70 (29.7 bits), Expect = 8.6e-36, Sum P(3) = 8.6e-36
Identities = 87/387 (22%), Positives = 151/387 (39%)
Query: 362 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 416
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 477 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 532
A++ + +E L + L +P LE L Q S A W R + N
Sbjct: 1010 AIQSGSNYAYLEQL-ESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 533 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 590
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD- 1122
Query: 591 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 650
TA V + ERE+ I+ L AA + D I + + C I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQC 1177
Query: 651 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 703
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 704 ISLKEQTELEKVINNCERWQNHASSLL 730
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDRARQAL 1264
Score = 62 (26.9 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 897
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1314 SPKHT 1318
S HT
Sbjct: 1067 S--HT 1069
Score = 53 (23.7 bits), Expect = 4.1e-44, Sum P(3) = 4.1e-44
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1032
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 47 (21.6 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 5.7e-43, Sum P(3) = 5.7e-43
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 907 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 41 (19.5 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 778 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 833
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 834 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 893
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLEA-LPQVESQVAAARAWRERT 1057
Query: 894 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 951
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1115
Query: 952 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1008
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1116 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1172
Query: 1009 YHLQC 1013
+ LQC
Sbjct: 1173 FMLQC 1177
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 444 (161.4 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 90/216 (41%), Positives = 133/216 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 533 MKRLAPELFVSQPDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQG 592
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 593 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQK 652
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P+ ++ C+ C+ ++SA++C C
Sbjct: 653 DMAIMIEDEKALRETVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCSC 707
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
+P VCL H + LC C K L YR+TL +LY +
Sbjct: 708 KPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPM 743
Score = 114 (45.2 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 40/195 (20%), Positives = 88/195 (45%)
Query: 540 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVIL 597
EL +L +++ L + L++AH E+ +AC + + LD +R++ V L
Sbjct: 888 ELQDLLDVSFEFDVELPQLAEMRTRLEQAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGL 947
Query: 598 QIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLD 653
EK L +L + W+++A +L + + + +++ ++I LPS
Sbjct: 948 APYSAVEKAMARLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGA 1007
Query: 654 EVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 713
+++ + A+ WL++ E P L++L +LV++ + + + L LE
Sbjct: 1008 ALKDSVQRARDWLQDVEALQVGGRV--PV------LDTLIELVTRGRSIPVHLSSLPRLE 1059
Query: 714 KVINNCERWQNHASS 728
++ W+ A++
Sbjct: 1060 SLVAEVHVWKECAAN 1074
Score = 98 (39.6 bits), Expect = 0.00075, Sum P(5) = 0.00075
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 977 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1036
K +V + +C+ C S S E L+C C D YH CL P D + + CP C E
Sbjct: 301 KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 359
Query: 1037 -SESVSQFG 1044
S+ FG
Sbjct: 360 CSKPQEAFG 368
Score = 87 (35.7 bits), Expect = 2.9e-44, Sum P(3) = 2.9e-44
Identities = 54/267 (20%), Positives = 107/267 (40%)
Query: 789 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 845
HW KA S L P SL + +++ E + S + L +S+ WL+ +E +
Sbjct: 969 HWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSVQRARDWLQD-VEALQ 1027
Query: 846 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS 905
+ L + E++ + I + L S + + +W+E F + S
Sbjct: 1028 VGGRVP--VLDTLIELVTRGRSIPVHLSS-LPRLESLVAEVHVWKECAANTFLTE--NSS 1082
Query: 906 WSLM-----------LQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDK 954
+SL+ L LK P K +V+ + + ++ E T+
Sbjct: 1083 FSLLEVLCPRCDVGLLGLKRKQRKLKEPLPSGRKKSPRVESLSDLERALMESRETA--SA 1140
Query: 955 NSLLGLLQKIKQSVHRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCY 1009
+ LG + + +SL + N+ P V M +C+C ++ + + + C C+D +
Sbjct: 1141 MATLGEARLREMEALQSLRLANEGKLLSPVQDVDMKVCLCQKAPAAPM--IQCELCRDAF 1198
Query: 1010 HLQCLRPTEVDRNHAEAYICPYCQYFE 1036
H C+ + + ++CP+C+ E
Sbjct: 1199 HTSCVAVPSISQG-PRIWLCPHCRRSE 1224
Score = 82 (33.9 bits), Expect = 2.9e-44, Sum P(3) = 2.9e-44
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 634 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 693
E +D++ S + V LP L E++ + A WL+ E+ A + P+S SL + L
Sbjct: 888 ELQDLLDVSFEFDVELPQLAEMRTRLEQAH-WLE--EVQQA---CLDPSSLSLDDMRRLI 941
Query: 694 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
DL V + + + K L++++ E W + A SLL+
Sbjct: 942 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKARSLLK 979
Score = 78 (32.5 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1232 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS---APEIYICAACK 1286
K L ++ M C+C+K MI C C + +H CV + S P I++C C+
Sbjct: 1165 KLLSPVQDVDMKVCLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGPRIWLCPHCR 1221
Score = 78 (32.5 bits), Expect = 6.5e-43, Sum P(3) = 6.5e-43
Identities = 52/239 (21%), Positives = 100/239 (41%)
Query: 343 VNELLGFDP----LPCNEPGHLILQNYAEEARSLIQEINAALSA-CSKISELELLYSRAS 397
VNEL F LPC +L++ Q LS +EL+ L +
Sbjct: 838 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSF 897
Query: 398 GLPICIVESEKLSQRISSAKVWRDSVRK-CISNKCPAAIEIDVLYKLESEALDLK-IDVP 455
+ + + ++ R+ A W + V++ C+ P+++ +D + +L + L
Sbjct: 898 EFDVELPQLAEMRTRLEQAH-WLEEVQQACLD---PSSLSLDDMRRLIDLGVGLAPYSAV 953
Query: 456 ETDM--LLKMIGQAESC--RARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYH 511
E M L +++ +E +AR R SL ++ +++E+ + +P LK
Sbjct: 954 EKAMARLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSV 1013
Query: 512 SDAIFWIARLNDI-LVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH 569
A W L D+ + + GR V+D L ++ G S+ + + LP +E + + H
Sbjct: 1014 QRARDW---LQDVEALQVGGRVP---VLDTLIELVTRGRSIPVHLSSLPRLESLVAEVH 1066
Score = 67 (28.6 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 746
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1228 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRARQLLSSGNLKPVQDRVGSGL 1285
Score = 64 (27.6 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 32/164 (19%), Positives = 68/164 (41%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 406
+ +P P L++ + AR +Q++ A L ++ L+ L +R +P+ +
Sbjct: 997 EEIPAYLPSGAALKDSVQRARDWLQDVEA-LQVGGRVPVLDTLIELVTRGRSIPVHLSSL 1055
Query: 407 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLY-KLESEALDLKIDVPETDMLLKMIG 465
+L ++ VW++ + + ++VL + + L LK + L G
Sbjct: 1056 PRLESLVAEVHVWKECAANTFLTENSSFSLLEVLCPRCDVGLLGLKRKQRKLKEPLPS-G 1114
Query: 466 QAESCRARC-SEALRGSMSLKTVELLLQELGDFTVNMPELELLK 508
+ +S R S+ R M + + LG+ + E+E L+
Sbjct: 1115 RKKSPRVESLSDLERALMESRETASAMATLGE--ARLREMEALQ 1156
Score = 62 (26.9 bits), Expect = 3.0e-41, Sum P(3) = 3.0e-41
Identities = 52/241 (21%), Positives = 101/241 (41%)
Query: 729 LLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFH--EISELQNACS 786
LL+D LL++ + S L+S E++ ++ E +S FD +++E++
Sbjct: 860 LLKD---LLNRVEDFQQHSQKLLS--EEMPSAAELQDLLDVSFEFDVELPQLAEMRTRLE 914
Query: 787 TLHWCKKAL-SFLSVSP-SLEDVESLMAVAEGLS--TRCFSSM--LWNSLIHGVKWLKRA 840
HW ++ + L S SL+D+ L+ + GL+ + +M L L W +A
Sbjct: 915 QAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKA 974
Query: 841 LEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK 900
++ A R L+ + V+ + I P L ++Q+ + W + V + +
Sbjct: 975 RSLLKAR---PRHSLNSLATVVKEMEEIPAYLPSGAA-LKDSVQRARDWLQDV-EALQVG 1029
Query: 901 CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGL 960
+++L G + L ++ S V +V WK+ C + SLL +
Sbjct: 1030 GRVPVLDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKE-CAANTFLTENSSFSLLEV 1088
Query: 961 L 961
L
Sbjct: 1089 L 1089
Score = 62 (26.9 bits), Expect = 5.9e-39, Sum P(3) = 5.9e-39
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 1195 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1254
+ W + ++ LD +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 916 AHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 973
Query: 1255 A 1255
A
Sbjct: 974 A 974
Score = 61 (26.5 bits), Expect = 4.0e-42, Sum P(4) = 4.0e-42
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
+L EL + W D A+ ++ SL+ + ++ E E +P YL
Sbjct: 959 RLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYL 1003
Score = 56 (24.8 bits), Expect = 4.0e-42, Sum P(4) = 4.0e-42
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD----ARCLLDKDDI 742
L + L+ V+Q L L + L+ ++N E +Q H+ LL + A L D D+
Sbjct: 836 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDV 895
Query: 743 GDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNAC 785
L ++ ++ T +E A H + E+Q AC
Sbjct: 896 SFEFDVEL-PQLAEMRTRLEQA-----------HWLEEVQQAC 926
Score = 53 (23.7 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1213 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC 1247
LD + EL+ G ++PV+L L+SL A ++ C
Sbjct: 1035 LDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKEC 1071
Score = 53 (23.7 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 44/195 (22%), Positives = 74/195 (37%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
+PLP +++ ++ R+L++ A SA + + E L A + + KL
Sbjct: 1109 EPLPSGRKKSPRVESLSDLERALMESRETA-SAMATLGEARLREMEALQ-SLRLANEGKL 1166
Query: 410 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 468
+ ++ C+ K PAA I +L +A + VP + I
Sbjct: 1167 LSPVQDV-----DMKVCLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGPR-IWLCP 1218
Query: 469 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 528
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1219 HCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRARQLLSSG 1272
Query: 529 NGRKDQHNVIDELNC 543
N + Q V L C
Sbjct: 1273 NLKPVQDRVGSGLLC 1287
Score = 44 (20.5 bits), Expect = 0.00075, Sum P(5) = 0.00075
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 420 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET-DMLLKMIGQAESCRA-RCSEA 477
R SV+ S CP A ++ +EA+++KI+ ET + + + C A +C
Sbjct: 215 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEETAEARTHNLRRRMGCPAPKCENE 269
Query: 478 --LRGSMSLKTVE 488
L+ S+ + +E
Sbjct: 270 KDLKSSIKQEALE 282
Score = 41 (19.5 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGT 949
PE + + +++ NW+ R ++++ +
Sbjct: 1246 PEGDALRYMIERTVNWQHRARQLLSS 1271
Score = 38 (18.4 bits), Expect = 2.9e-40, Sum P(4) = 2.9e-40
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 967
P + + + + W E + + K SL+ I++S
Sbjct: 742 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 785
Score = 38 (18.4 bits), Expect = 2.9e-40, Sum P(4) = 2.9e-40
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 736 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 794
Query: 750 LVSKIEQLITSMESAANC 767
L+ + +L+T + A C
Sbjct: 795 LLRHL-RLVT--QDAEKC 809
Score = 37 (18.1 bits), Expect = 0.00075, Sum P(5) = 0.00075
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 1063 LLSDSEFFCRGIEAKDVLQEVV 1084
+ S E CR DVL VV
Sbjct: 625 VFSHDEMICRMASKADVLDVVV 646
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 425 (154.7 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 94/220 (42%), Positives = 130/220 (59%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 137 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 196
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 197 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 256
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 257 ELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 311
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C +K L YR+ L +L L V
Sbjct: 312 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 351
Score = 136 (52.9 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 78/337 (23%), Positives = 153/337 (45%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 354 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 408
Query: 466 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 520
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 409 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 464
Query: 521 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 572
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 465 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 524
Query: 573 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 628
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 525 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 584
Query: 629 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 686
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 585 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 636
Query: 687 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 723
LE L+ L ++ + + + L+ ++E + W+
Sbjct: 637 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWR 673
Score = 86 (35.3 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 54/240 (22%), Positives = 106/240 (44%)
Query: 517 WIARLNDIL-VNINGRKDQHNVIDELNCILKEGASLRIQVDDL-PLVEVELKKAH-C--- 570
W++R+ + L N N +KD + EL +L++ + +DL + +K+A C
Sbjct: 361 WVSRVTEALSANFNHKKD----LIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASV 416
Query: 571 -------REKALKACD-----TKMPLD----FIRQV-TAEAVILQIEREKLFIDLSGVLA 613
++K ++ D TK+ ++ F++Q+ + VI Q + K +D
Sbjct: 417 AQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLD------ 470
Query: 614 AAMRWEERAADILIHKA-QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELF 672
+ ERA + ++ + + + +I ++V LP L ++ E+ A+ WL L
Sbjct: 471 DVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQAR-WLDEVRLT 529
Query: 673 LASAFAVAPASCSLLRLESLKDL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
L+ P +L ++ L D V + + K EL++++ ERW+ A LQ
Sbjct: 530 LSD-----PQQVTLDVMKKLIDSGVGLAPHHAVE-KAMAELQELLTVSERWEEKAKVCLQ 583
Score = 78 (32.5 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 560 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 609
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 610 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 669
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 670 RAWRERTGRTFLKKNSSHTLLQVL 693
Score = 70 (29.7 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 442 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 501
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 502 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 553
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 554 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 611
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 612 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 670
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 671 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 701
Score = 62 (26.9 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 458 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 516
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 517 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 573
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 574 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 626
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 627 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 685
Query: 1314 SPKHT 1318
S HT
Sbjct: 686 S--HT 688
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 426 (155.0 bits), Expect = 3.4e-45, Sum P(3) = 3.4e-45
Identities = 94/220 (42%), Positives = 129/220 (58%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLLTEEETRLRESVMQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C +K L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 124 (48.7 bits), Expect = 3.4e-45, Sum P(3) = 3.4e-45
Identities = 91/414 (21%), Positives = 176/414 (42%)
Query: 412 RISSAKVWRDSVRKCIS----NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
R S W V + +S +K IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKGDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAV 789
Query: 465 GQAESCRARCSEALRGSMSLKT--------VELLLQELGDFTVNMPELE-LLKQYHSDAI 515
+AE+C + L + +L ++EL F + L ++ Q
Sbjct: 790 KEAETCASVAQLLLSKKQKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQ--- 846
Query: 516 FWIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAH 569
+ L D + + R Q ++DE L ++ G+SL +++ +L ++ EL++A
Sbjct: 847 --VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQAR 903
Query: 570 CREKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADI 625
++ L D + + LD ++++ V L EK +L +L + RWEE+A
Sbjct: 904 WLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVC 963
Query: 626 LIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPAS 683
L + + + E I+ ++ I LP++ ++ + A+ W E A+ S
Sbjct: 964 LQARPRHSVASLESIVNEAKSIPAFLPNVLSLKEALQKAREWTTKVE-------AIQSGS 1016
Query: 684 CSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD-- 738
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1017 -NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVL 1075
Query: 739 --KDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHE-ISELQNACSTL 788
+ DIG G + K+++LI E + L D E + E ++A + +
Sbjct: 1076 SPRTDIGIYGSGKNRRKKVKELIEK-EKEKDLDLEPLSDLEEGLEETRDAATVV 1128
Score = 84 (34.6 bits), Expect = 4.1e-45, Sum P(4) = 4.1e-45
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1295
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S P
Sbjct: 1618 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAESEDYICTNCAKKQGPDSPGP 1672
Score = 78 (32.5 bits), Expect = 3.4e-45, Sum P(3) = 3.4e-45
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +CICRK M+ C C +W+H CV L
Sbjct: 1158 RIEDVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1192
Score = 77 (32.2 bits), Expect = 2.9e-40, Sum P(4) = 2.9e-40
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 942 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKS---IPAFLPN 991
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 992 VLSLKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1051
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1052 RAWRERTGRTFLKKNSSHTLLQVL 1075
Score = 67 (28.6 bits), Expect = 3.2e-39, Sum P(4) = 3.2e-39
Identities = 47/269 (17%), Positives = 121/269 (44%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 824 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 883
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 884 S---LYVELPELARLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 935
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H+V L I+ E S+ + ++
Sbjct: 936 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKSIPAFLPNVL 993
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 994 SLKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1052
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDI 645
W ER + K ++ DI
Sbjct: 1053 AWRERTGRTFLKKNSSHTLLQVLSPRTDI 1081
Score = 56 (24.8 bits), Expect = 9.7e-39, Sum P(3) = 9.7e-39
Identities = 56/283 (19%), Positives = 115/283 (40%)
Query: 778 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 833
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 943 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKSIPAFLPNVLSLKEALQKA 1002
Query: 834 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 893
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1003 REWTTK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1058
Query: 894 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 951
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1059 GRTF-LK-KNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1116
Query: 952 G-----DKNSLLGLL----QKIKQSVHRSLYIYNKPHGSV-----SMTLCMCCESDSKEL 997
G D +++ + QK +++H SL N S+ + C+C ++ S +
Sbjct: 1117 GLEETRDAATVVAVFKEREQKELEAMH-SLRAANLAKMSMVDRIEDVKFCICRKTASGFM 1175
Query: 998 EFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1032
L C CKD +H C+ P + + ++CP C
Sbjct: 1176 --LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1216
Score = 56 (24.8 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 78/385 (20%), Positives = 143/385 (37%)
Query: 362 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 416
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 895 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 953
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ W + + C+ + P + L + +EA + +P L + + +A +
Sbjct: 954 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKSIPAFLPNVLSLKEALQKAREWTTKVEA 1011
Query: 477 ALRGS--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 534
GS L+ +E L + V + L ++ + A W R + N
Sbjct: 1012 IQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTL 1071
Query: 535 HNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA 592
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1072 LQVLSPRTDIGIYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRDAAT 1126
Query: 593 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL 652
+ + ERE+ ++ L AA + D I + C I R + F++ L
Sbjct: 1127 VVAVFK-EREQKELEAMHSLRAANLAKMSMVD-RIEDVKFC----ICRKTASGFMLQCEL 1180
Query: 653 --DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKIS 705
D N + + S K S + P R LE++ L+ + L +
Sbjct: 1181 CKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVR 1240
Query: 706 LKEQTELEKVINNCERWQNHASSLL 730
L E L+ + WQ+ A L
Sbjct: 1241 LPEGEALQCLTERAMSWQDRARQAL 1265
Score = 55 (24.4 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 34/162 (20%), Positives = 68/162 (41%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ A + K L D+ +F + D S+KL + + + V + + L
Sbjct: 840 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELARLKQE 898
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 899 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 955
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1238
W + AK + S+ + ++ E +++P +L L SL+
Sbjct: 956 WEEKAKVCLQARPRHSVASLESIVNEAKSIPAFLPNVL-SLK 996
Score = 47 (21.6 bits), Expect = 8.3e-38, Sum P(3) = 8.3e-38
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1228 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1266
Score = 43 (20.2 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 880
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVSRVTEALSANFNHKKGDLIELRVMLEDAEDRKYPENDLFRKLR 786
Query: 881 SAIQKHKLWQEQVHQFFNLKCA-QQS-----WSLMLQLKELGEAAA--FDCP----ELEK 928
A+++ + + K +QS L ++EL F P + +
Sbjct: 787 DAVKEAETCASVAQLLLSKKQKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 846
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + D + L L+
Sbjct: 847 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 879
Score = 42 (19.8 bits), Expect = 4.1e-45, Sum P(4) = 4.1e-45
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 907 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1229 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1282
Score = 41 (19.5 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 1187 LMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLE 1231
L E + +W + + S L+++ L A+G +PV L+
Sbjct: 995 LKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLD 1039
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 415 (151.1 bits), Expect = 3.7e-45, Sum P(3) = 3.7e-45
Identities = 91/220 (41%), Positives = 128/220 (58%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 521 MKELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 580
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 581 YNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCK 640
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 641 EMTLMIEEETRLRETVVQMGVL----MSEEEVFELV-PDDERQCTACRTTCFLSALTCSC 695
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C + L YR+ L +L L V
Sbjct: 696 NPERLVCLYHPSDLCPCPMQNKCLRYRYPLEDLPSLLYGV 735
Score = 135 (52.6 bits), Expect = 3.7e-45, Sum P(3) = 3.7e-45
Identities = 78/340 (22%), Positives = 144/340 (42%)
Query: 251 GVRVTMSQLVEQWLSCSLKVLQGLFS--SDAYG--TLLREAEQFLWAGFEMDAVRDMVNK 306
GV+V +Q + W+S + L + D +L +AE + E D R + +
Sbjct: 734 GVKVR-AQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYP--ENDLFRKLRDA 790
Query: 307 LIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDC-VNELLGFD----PLPCNEPGHLI 361
+ E A + L K + S DS + R + EL F LPC
Sbjct: 791 VKEAETCASVAQLLLSKKQKHSR-QSQDSGRTRTKLTMEELKAFVHQLFSLPCVISQARQ 849
Query: 362 LQNYAEEARSLIQEINAAL-SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWR 420
++N ++ + A+ S+L+ L SGL + + E +L Q + A+ W
Sbjct: 850 VKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSGLYVELPELPRLKQELQQAR-WL 908
Query: 421 DSVRKCISNKCPAAIEIDVLYKLESEALDLK----ID--VPETDMLLKMIGQAESCRARC 474
D VR + + P + +DV+ KL + L ++ + E LL + + E C
Sbjct: 909 DEVRSTLLD--PQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVC 966
Query: 475 SEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 534
+A R S+ +E ++ E + +P + LK+ A W A++ I NG +
Sbjct: 967 LQA-RPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEAIQ---NG--NN 1020
Query: 535 HNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REK 573
+ +++L + +G + +++D LP +E ++ A RE+
Sbjct: 1021 YAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRER 1060
Score = 119 (46.9 bits), Expect = 4.3e-43, Sum P(4) = 4.3e-43
Identities = 74/365 (20%), Positives = 155/365 (42%)
Query: 436 EIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELG 495
E D+ KL + + +LL Q S +++ S R ++++ ++ + +L
Sbjct: 780 ENDLFRKLRDAVKEAETCASVAQLLLSK-KQKHSRQSQDSGRTRTKLTMEELKAFVHQLF 838
Query: 496 DFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQV 555
+ + +K D + R + ++ D+ +L ++ G+ L +++
Sbjct: 839 SLPCVISQARQVKNLLDDVEEFHERAQEAMM------DEVPDSSKLQELIDMGSGLYVEL 892
Query: 556 DDLPLVEVELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGV 611
+LP ++ EL++A ++ ++ LD ++++ V L EK +L +
Sbjct: 893 PELPRLKQELQQARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQEL 952
Query: 612 LAAAMRWEERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNS 669
L + RWEE+A L + + M E I+ +++I LP++ ++ + A+ W
Sbjct: 953 LTVSERWEEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKV 1012
Query: 670 ELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ------ 723
E A+ + + LE L++L ++ + + + L +LE + W+
Sbjct: 1013 E-------AIQNGN-NYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRT 1064
Query: 724 ----NHASSLLQDARCLLDKDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHEI 778
N + SLLQ L + DIG G S + + ++L ME L D +
Sbjct: 1065 FLKKNSSYSLLQ---VLSPRTDIGVYGSSKNRRKRAKEL---MEKEKEKDL----DLESL 1114
Query: 779 SELQN 783
SEL++
Sbjct: 1115 SELED 1119
Score = 78 (32.5 bits), Expect = 3.7e-45, Sum P(3) = 3.7e-45
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +C+CRK M+ C C +W+H CV L
Sbjct: 1161 RIEEVKFCVCRKTASG-FMLQCELCKDWFHSSCVPL 1195
Score = 77 (32.2 bits), Expect = 9.5e-45, Sum P(4) = 9.5e-45
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1295
C++P +K + C CDEW+H CV + ++ E YIC C K + S+P
Sbjct: 1619 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKTMQGPSSP 1673
Score = 75 (31.5 bits), Expect = 1.5e-38, Sum P(4) = 1.5e-38
Identities = 44/201 (21%), Positives = 83/201 (41%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL S + E + VNE +P P
Sbjct: 945 AMAELQELLTVSERWEEKAKVCLQARPRQSMMA---LEGI----VNEAKN---IPAYLPN 994
Query: 359 HLILQNYAEEARSLIQEINAALSA--CSKISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ + AR ++ A + + + +LE L ++ +P+ + +L ++++A
Sbjct: 995 VLALKEALQRARDWTAKVEAIQNGNNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAA 1054
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ WR+ + K + Y L L++ P TD + + G +++ R R E
Sbjct: 1055 RAWRERTGRTFLKKNSS-------YSL------LQVLSPRTD--IGVYGSSKNRRKRAKE 1099
Query: 477 ALRGSMSLKTVEL-LLQELGD 496
+ K ++L L EL D
Sbjct: 1100 LMEKEKE-KDLDLESLSELED 1119
Score = 60 (26.2 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 30/157 (19%), Positives = 63/157 (40%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVF-DRQSNSALDFAL 1141
V+ A + K L D+ +F + + + + + +G++ + L L
Sbjct: 843 VISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSGLYVELPELPRLKQEL 902
Query: 1142 ARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQW 1197
+ W V L + T+ ++ + G+ ++P H +K M EL + +W
Sbjct: 903 QQARWLDEVRSTLLDPQRVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSERW 959
Query: 1198 ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKEL 1234
+ AK + S+ + ++ E +N+P YL L
Sbjct: 960 EEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVL 996
Score = 60 (26.2 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 70/371 (18%), Positives = 145/371 (39%)
Query: 692 LKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA-SSLLQDARCLLD--KDDIGDGLSN 748
L++L+ L + L E L++ + RW + S+LL R LD K I G+
Sbjct: 878 LQELIDMGSGLYVELPELPRLKQELQQA-RWLDEVRSTLLDPQRVTLDVMKKLIDSGVGL 936
Query: 749 SLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSP--SLED 806
+ +E+ + ++ +SE W +KA L P S+
Sbjct: 937 APHHAVEKAMAELQELLT-----------VSE--------RWEEKAKVCLQARPRQSMMA 977
Query: 807 VESLMAVAEGLSTRCFSSM-LWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGC 865
+E ++ A+ + + + L +L W + +E I + L +E + A
Sbjct: 978 LEGIVNEAKNIPAYLPNVLALKEALQRARDWTAK-VEAIQNGNNY--AYLEQLENLSAKG 1034
Query: 866 KGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE 925
+ I + +L S + + W+E+ + F LK S+SL+ L + + +
Sbjct: 1035 RPIPVRLDA-LPQLESQVAAARAWRERTGRTF-LK-KNSSYSLLQVLSPRTDIGVYGSSK 1091
Query: 926 LEKVLSKVDKVENWKQRCKEIVGTS--------VGDKNSLLGLLQKIKQSVHRSLYIYNK 977
+ +K + +E K++ ++ S D +++ + ++ +Q +++
Sbjct: 1092 NRRKRAK-ELMEKEKEKDLDLESLSELEDGLEEARDTAAVVAIFKEREQKEIEAMHTLRA 1150
Query: 978 PH-GSVSMT-------LCMCCESDSKELEFLICSACKDCYHLQC--LRPTEVDRNHAE-- 1025
+ ++M C+C ++ S + L C CKD +H C L T + +
Sbjct: 1151 ANLAKMTMVDRIEEVKFCVCRKTASGFM--LQCELCKDWFHSSCVPLPKTSSQKKGSSWQ 1208
Query: 1026 ----AYICPYC 1032
++CP C
Sbjct: 1209 AKEVKFLCPLC 1219
Score = 60 (26.2 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 80/384 (20%), Positives = 146/384 (38%)
Query: 362 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 416
L+ ++AR L E+ + L +++ ++ L GL P VE +L + ++ +
Sbjct: 898 LKQELQQARWL-DEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 956
Query: 417 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 476
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 957 ERWEEKAKVCLQAR-PRQ-SMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKV-E 1013
Query: 477 ALRGSMSLKTVELL--LQELG-DFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKD 533
A++ + +E L L G V + L L+ + A W R + N
Sbjct: 1014 AIQNGNNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYS 1073
Query: 534 QHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAE 593
V+ I G+S + L+E E +K E + D L+ R A
Sbjct: 1074 LLQVLSPRTDIGVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDG---LEEARDTAAV 1130
Query: 594 AVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL- 652
I + ERE+ I+ L AA + D I + + C + R + F++ L
Sbjct: 1131 VAIFK-EREQKEIEAMHTLRAANLAKMTMVD-RIEEVKFC----VCRKTASGFMLQCELC 1184
Query: 653 -DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKISL 706
D + + S K S + P R LE++ L+ + L + L
Sbjct: 1185 KDWFHSSCVPLPKTSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRL 1244
Query: 707 KEQTELEKVINNCERWQNHASSLL 730
E L+ + WQ+ A L
Sbjct: 1245 PEGEALQCLTERAMSWQDRARQAL 1268
Score = 48 (22.0 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFK------RCKLSDVEEVLAGCKGI--NFSF 872
SL++GVK W+ R E +SA K R L D E+ +
Sbjct: 730 SLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLFRKLRD 789
Query: 873 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSL-MLQLKE-LGEAAAFDC--PELEK 928
V E +++ + L ++Q H + + L M +LK + + + C + +
Sbjct: 790 AVKEAETCASVAQLLLSKKQKHSRQSQDSGRTRTKLTMEELKAFVHQLFSLPCVISQARQ 849
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + V D + L L+
Sbjct: 850 VKNLLDDVEEFHERAQEAMMDEVPDSSKLQELI 882
Score = 47 (21.6 bits), Expect = 6.9e-36, Sum P(3) = 6.9e-36
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1231 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1269
Score = 46 (21.3 bits), Expect = 9.5e-45, Sum P(4) = 9.5e-45
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 880 TSAIQKHKLWQEQVHQFFNLKCAQQS-------WSLMLQLKELGEAAAFDCPELEKVLSK 932
TS+ +K WQ + +F C + SL++ L++L PE E +
Sbjct: 1198 TSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKL----PVRLPEGEALQCL 1253
Query: 933 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
++ +W+ R ++ + T + +S L L + Q
Sbjct: 1254 TERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1285
Score = 43 (20.2 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 893 VHQFFNLKC----AQQSWSLMLQLKELGEAA--AF--DCPELEKVLSKVD 934
VHQ F+L C A+Q +L+ ++E E A A + P+ K+ +D
Sbjct: 834 VHQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELID 883
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 422 (153.6 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 93/220 (42%), Positives = 129/220 (58%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C + L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 146 (56.5 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 81/339 (23%), Positives = 153/339 (45%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 516
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 517 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 570
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 571 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 627 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 723
+ LE L+ L ++ + + + L ++E + W+
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWR 1054
Score = 83 (34.3 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 586 FIRQ-VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA-QMCEFEDIIRASQ 643
F++Q V+ VI Q + K +D + ERA + ++ + + + +I
Sbjct: 829 FVQQLVSLPCVISQTRQVKNLLD------DVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 644 DIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL-VSQSKFL 702
++V LP L ++ E+ A+ WL L L+ P +L ++ L D V +
Sbjct: 883 SLYVELPELPRLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMKKLIDSGVGLAPHH 936
Query: 703 KISLKEQTELEKVINNCERWQNHASSLLQ 731
+ K EL++++ ERW+ A LQ
Sbjct: 937 AVE-KAMAELQELLTVSERWEEKAKVCLQ 964
Score = 77 (32.2 bits), Expect = 8.0e-38, Sum P(2) = 8.0e-38
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 66 (28.3 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1314 SPKHT 1318
S HT
Sbjct: 1067 S--HT 1069
Score = 42 (19.8 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 880
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 881 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 928
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 922 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 970
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 422 (153.6 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 93/220 (42%), Positives = 129/220 (58%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C + L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 146 (56.5 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 81/339 (23%), Positives = 153/339 (45%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 516
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 517 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 570
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 571 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 627 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 723
+ LE L+ L ++ + + + L ++E + W+
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWR 1054
Score = 83 (34.3 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 586 FIRQ-VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA-QMCEFEDIIRASQ 643
F++Q V+ VI Q + K +D + ERA + ++ + + + +I
Sbjct: 829 FVQQLVSLPCVISQTRQVKNLLD------DVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 644 DIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL-VSQSKFL 702
++V LP L ++ E+ A+ WL L L+ P +L ++ L D V +
Sbjct: 883 SLYVELPELPRLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMKKLIDSGVGLAPHH 936
Query: 703 KISLKEQTELEKVINNCERWQNHASSLLQ 731
+ K EL++++ ERW+ A LQ
Sbjct: 937 AVE-KAMAELQELLTVSERWEEKAKVCLQ 964
Score = 77 (32.2 bits), Expect = 8.0e-38, Sum P(2) = 8.0e-38
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 66 (28.3 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDIFV 647
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1314 SPKHT 1318
S HT
Sbjct: 1067 S--HT 1069
Score = 42 (19.8 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 880
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 881 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 928
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 922 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 970
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 425 (154.7 bits), Expect = 6.0e-43, Sum P(4) = 6.0e-43
Identities = 93/220 (42%), Positives = 130/220 (59%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP++L+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C +K L YR+ L +L L V
Sbjct: 693 NPERLVCLYHPNDLCPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 100 (40.3 bits), Expect = 6.0e-43, Sum P(4) = 6.0e-43
Identities = 84/378 (22%), Positives = 159/378 (42%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 520
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 521 LNDILVNING--RKDQHNVIDEL--NCILKEGASLRIQVDDLPLVEVELKKAHCR---EK 573
+ ++L ++ + Q ++DE + L+ + + VD + + R E
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMALVVDXXXXSPTKARSQQARWLDEV 905
Query: 574 ALKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKA 630
L D + + LD ++++ V L EK +L +L + RWEE+A L +
Sbjct: 906 RLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARP 965
Query: 631 Q--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLR 688
+ + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RHSVASLESIVNEAKNIPAFLPNILSLKEALQKAREWTAKVE-------AIQSGS-NYAY 1017
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----KDD 741
LE L+ L ++ + + + L ++E + W+ + L+ + LL + D
Sbjct: 1018 LEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTD 1077
Query: 742 IGD-GLSNSLVSKIEQLI 758
IG G + K+++LI
Sbjct: 1078 IGIYGSGKNRRKKVKELI 1095
Score = 78 (32.5 bits), Expect = 6.0e-43, Sum P(4) = 6.0e-43
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1247 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1292
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1613 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDS 1664
Score = 78 (32.5 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1238 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1273
R + +CICRK M+ C C +W+H CV L
Sbjct: 1155 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1189
Score = 77 (32.2 bits), Expect = 1.4e-40, Sum P(4) = 1.4e-40
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 358
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 939 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 988
Query: 359 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 416
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 989 ILSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1048
Query: 417 KVWRDSVRKCISNKCPAAIEIDVL 440
+ WR+ + K + + VL
Sbjct: 1049 RAWRERTGRTFLKKNSSHTLLQVL 1072
Score = 65 (27.9 bits), Expect = 2.7e-38, Sum P(4) = 2.7e-38
Identities = 83/381 (21%), Positives = 147/381 (38%)
Query: 366 AEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSAKVWR 420
+++AR L E+ LS +++ ++ L GL P VE +L + ++ ++ W
Sbjct: 896 SQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWE 954
Query: 421 DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG 480
+ + C+ + P + L + +EA ++ +P L + + +A A+ G
Sbjct: 955 EKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNILSLKEALQKAREWTAKVEAIQSG 1012
Query: 481 S--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVI 538
S L+ +E L + V + L ++ + A W R + N V+
Sbjct: 1013 SNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVL 1072
Query: 539 DELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVI 596
I G + R +V +L +E E +K E D + L+ R TA V
Sbjct: 1073 SPRTDIGIYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD-TAMVVA 1126
Query: 597 LQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL--DE 654
+ ERE+ I+ L AA + D I + + C I R + F++ L D
Sbjct: 1127 VFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQCELCKDW 1181
Query: 655 VQNE-ISTAKSWL-KNSELFLASAFAVAPASCSLLR---LESLKDLVSQSKFLKISLKEQ 709
N + KS K + A C R LE++ L+ + L + L E
Sbjct: 1182 FHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEG 1241
Query: 710 TELEKVINNCERWQNHASSLL 730
L+ + WQ+ A L
Sbjct: 1242 EALQCLTERAMSWQDRARQAL 1262
Score = 65 (27.9 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 55/245 (22%), Positives = 96/245 (39%)
Query: 1083 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1140
V+ A + K L D+ +F + D S+KL + + + A V D S
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI---DMALVVDXXXXSPTKAR 895
Query: 1141 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1196
+ W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 896 SQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 952
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1256
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 953 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNIL-SLKEA------LQKAREWTAK 1005
Query: 1257 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1313
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1006 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1064
Query: 1314 SPKHT 1318
S HT
Sbjct: 1065 S--HT 1067
Score = 53 (23.7 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 45/269 (16%), Positives = 119/269 (44%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQML----- 877
Query: 446 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 503
+D+ + V D +A S +AR + +R ++S + V L ++++L D V +
Sbjct: 878 --IDMALVV---DXXXXSPTKARSQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 932
Query: 504 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 559
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 933 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNIL 990
Query: 560 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 616
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 991 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1049
Query: 617 RWEERAADILIHKAQMCEFEDIIRASQDI 645
W ER + K ++ DI
Sbjct: 1050 AWRERTGRTFLKKNSSHTLLQVLSPRTDI 1078
Score = 52 (23.4 bits), Expect = 6.0e-43, Sum P(4) = 6.0e-43
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1032
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1162 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLC 1213
Score = 47 (21.6 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 389 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 428
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1225 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1263
Score = 42 (19.8 bits), Expect = 6.5e-42, Sum P(4) = 6.5e-42
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 907 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 966
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1226 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1279
Score = 40 (19.1 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 778 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 833
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 940 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNILSLKEALQKA 999
Query: 834 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 893
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1000 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1055
Query: 894 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 951
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1056 GRTF-LK-KNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1113
Query: 952 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1008
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1114 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1170
Query: 1009 YHLQC 1013
+ LQC
Sbjct: 1171 FMLQC 1175
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 425 (154.7 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 94/220 (42%), Positives = 130/220 (59%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 135 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 194
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 195 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 254
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +++ C CR +LSA+ C C
Sbjct: 255 ELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSC 309
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 218
P VCL H LC C +K L YR+ L +L L V
Sbjct: 310 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 349
Score = 82 (33.9 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 60/236 (25%), Positives = 107/236 (45%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W V + +S N IE+ V+ LE +A D K PE D+ ++ +
Sbjct: 352 RAQSYDTWVSRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRQLRDAVK 406
Query: 466 QAESCRARCSEAL------RGSM-SLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 516
+AE+C + L R S S +T +L ++EL F + L ++ Q
Sbjct: 407 EAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ---- 462
Query: 517 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 570
+ L D + + R Q ++DE L ++ G+SL +++ +L ++ EL++A
Sbjct: 463 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQARW 520
Query: 571 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERA 622
++ L D + + LD ++++ V L EK +L +L + RWEE+A
Sbjct: 521 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKA 576
Score = 81 (33.6 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 50/222 (22%), Positives = 96/222 (43%)
Query: 518 IARLNDILVNINGRK-DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALK 576
+ L +L + RK ++++ +L +KE A V L L + K+ H +
Sbjct: 377 LIELRVMLEDAEDRKYPENDLFRQLRDAVKE-AETCASVAQLLLSK---KQKHRQSPDSG 432
Query: 577 ACDTKMPLD----FIRQV-TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA- 630
TK+ ++ F++Q+ + VI Q + K +D + ERA + ++ +
Sbjct: 433 RTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLD------DVEEFHERAQEAMMDETP 486
Query: 631 QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ + +I ++V LP L ++ E+ A+ WL L L+ P +L ++
Sbjct: 487 DSSKLQMLIDMGSSLYVELPELARLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMK 540
Query: 691 SLKDL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 731
L D V + + K EL++++ ERW+ A LQ
Sbjct: 541 KLIDSGVGLAPHHAVE-KAMAELQELLTVSERWEEKAKVCLQ 581
Score = 57 (25.1 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 51/221 (23%), Positives = 91/221 (41%)
Query: 1054 RSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTCLTD----IVKFESCYLDKDL 1109
+ DL L +L D+E R D+ +++ D E +TC + + K + D
Sbjct: 374 KKDLIELRVMLEDAED--RKYPENDLFRQLRDAVKEAETCASVAQLLLSKKQKHRQSPDS 431
Query: 1110 HVISNKLTIT-LKAREAAGVFD--------RQSNSALDFALARNLWRVRVSKLLEGLTKP 1160
KLT+ LKA +F RQ + LD + R + + T P
Sbjct: 432 GRTRTKLTVEELKAF-VQQLFSLPCVISQARQVKNLLDDV---EEFHERAQEAMMDET-P 486
Query: 1161 TIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELI 1220
++Q + G + + + R K EL + ++W D + + D ++LD + +LI
Sbjct: 487 DSSKLQMLIDMGSSLYVELPELARLK-QELQQ--ARWLDEVRLTLSDPQQVTLDVMKKLI 543
Query: 1221 AEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ 1261
G L + E K++ L + + ++EKA + C Q
Sbjct: 544 DSGVGLAPHHAVE-KAMAELQELLTVSER-WEEKAKV-CLQ 581
Score = 56 (24.8 bits), Expect = 8.7e-40, Sum P(2) = 8.7e-40
Identities = 14/82 (17%), Positives = 40/82 (48%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 440 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 499
Query: 446 EALDLKIDVPETDMLLKMIGQA 467
L +++PE L + + QA
Sbjct: 500 S---LYVELPELARLKQELQQA 518
Score = 39 (18.8 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 922 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 970
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 341 DLPSLLYGVKVRAQSYDTWVSRVTEALSASFNHKKDLIELRVMLEDAEDR 390
Score = 39 (18.8 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 829 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 880
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 344 SLLYGVKVRAQSYDTWVSRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRQLR 402
Query: 881 SAIQKHKLWQEQVHQFFNLKCA-QQS-----WSLMLQLKELGEAAA--FDCP----ELEK 928
A+++ + + K +QS L ++EL F P + +
Sbjct: 403 DAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 462
Query: 929 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 961
V + +D VE + +R +E + D + L L+
Sbjct: 463 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 495
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 471 (170.9 bits), Expect = 5.1e-41, Sum P(2) = 5.1e-41
Identities = 172/614 (28%), Positives = 277/614 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPH 841
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 842 RVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEGYQAEAREALASLPSSPGLL 901
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L + LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 902 QSLLERGQQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPAARRGTLAVMRGLLV 955
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 956 AGASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIP 1013
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1014 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 510 YHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH 569
A W + + + +K+ + E+ C + S I+ E+ L K+
Sbjct: 1074 QVLTAHSWREKASKTFL----KKNSCYTLLEVLCPCADAGSDSIKRSRWMEKELGLYKSD 1129
Query: 570 CREKALKACDTKMP 583
L A D + P
Sbjct: 1130 TELLGLSAQDLRDP 1143
Score = 147 (56.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 86/387 (22%), Positives = 163/387 (42%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNING-RKDQHNVIDEL--- 541
+++ L EL F M L A+ I + IL + G + + + L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPC-------AMHQIGDVKGILEQVEGYQAEAREALASLPSS 897
Query: 542 ----NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTA 592
+L+ G L ++V + ++ ++++A + + L + L +R V
Sbjct: 898 PGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAG 957
Query: 593 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLP 650
+V +K +L +L A RWEE+A L K E II +++I V LP
Sbjct: 958 ASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLP 1017
Query: 651 SLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ 709
++ ++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEEL 1068
Query: 710 TELEKVINNCERWQNHAS-SLLQDARC 735
+LE + W+ AS + L+ C
Sbjct: 1069 RQLELQVLTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 5.1e-41, Sum P(2) = 5.1e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 6.5e-41, Sum P(2) = 6.5e-41
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 946 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1005
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAG-VGALQCDLC 1205
Query: 1006 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1064
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 46 (21.3 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 471 (170.9 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 172/614 (28%), Positives = 277/614 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPH 841
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 842 RVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEGYQAEAREALASLPSSPGLL 901
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L + LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 902 QSLLERGQQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPAARRGTLAVMRGLLV 955
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 956 AGASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIP 1013
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1014 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 510 YHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH 569
A W + + + +K+ + E+ C + S I+ E+ L K+
Sbjct: 1074 QVLTAHSWREKASKTFL----KKNSCYTLLEVLCPCADAGSDSIKRSRWMEKELGLYKSD 1129
Query: 570 CREKALKACDTKMP 583
L A D + P
Sbjct: 1130 TELLGLSAQDLRDP 1143
Score = 147 (56.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 86/387 (22%), Positives = 163/387 (42%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNING-RKDQHNVIDEL--- 541
+++ L EL F M L A+ I + IL + G + + + L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPC-------AMHQIGDVKGILEQVEGYQAEAREALASLPSS 897
Query: 542 ----NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTA 592
+L+ G L ++V + ++ ++++A + + L + L +R V
Sbjct: 898 PGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAG 957
Query: 593 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLP 650
+V +K +L +L A RWEE+A L K E II +++I V LP
Sbjct: 958 ASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLP 1017
Query: 651 SLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ 709
++ ++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEEL 1068
Query: 710 TELEKVINNCERWQNHAS-SLLQDARC 735
+LE + W+ AS + L+ C
Sbjct: 1069 RQLELQVLTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 7.0e-41, Sum P(2) = 7.0e-41
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 946 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1005
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAG-VGALQCDLC 1205
Query: 1006 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1064
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 46 (21.3 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 466 (169.1 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
Identities = 161/548 (29%), Positives = 252/548 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 548 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 607
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 608 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 667
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 668 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 722
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 723 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 782
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L++Q +C L + S A G + +EA
Sbjct: 783 EDGRKRSLEELRALESEARERRFPNSELLQQLKNC-LSEAEACVSR-ALGLVSGQEAGPH 840
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 841 RVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLL 900
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 901 QSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLV 954
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 955 AGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIREAENIP 1012
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1013 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1072
Query: 510 YHSDAIFW 517
A W
Sbjct: 1073 QVLTAHSW 1080
Score = 155 (59.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 60/234 (25%), Positives = 116/234 (49%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 862 LPCAM--HQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 919
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 920 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 978
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 979 AERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDE 1037
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1038 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1086
Score = 147 (56.8 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 84/382 (21%), Positives = 161/382 (42%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 730 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 785
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 786 RKRSLEELRALESEARERRF--PNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA 843
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 542
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 844 GLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--AYQAEAREALASLPSSPGLLQ 901
Query: 543 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 597
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 902 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 961
Query: 598 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 655
+K +L +L A RWEE+A L K E IIR +++I V LP++ +
Sbjct: 962 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL 1021
Query: 656 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 714
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1022 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1072
Query: 715 VINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1073 QVLTAHSWREKASKTFLKKNSC 1094
Score = 65 (27.9 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1187 CVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSP 1222
Score = 50 (22.7 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1254 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1297
Score = 46 (21.3 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1253 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1306
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 466 (169.1 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
Identities = 161/548 (29%), Positives = 252/548 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L++Q +C L + S A G + +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQQLKNC-LSEAEACVSR-ALGLVSGQEAGPH 841
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 842 RVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLL 901
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 902 QSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLV 955
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 956 AGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIREAENIP 1013
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1014 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 510 YHSDAIFW 517
A W
Sbjct: 1074 QVLTAHSW 1081
Score = 155 (59.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 60/234 (25%), Positives = 116/234 (49%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 920
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 147 (56.8 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 84/382 (21%), Positives = 161/382 (42%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 542
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 845 GLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--AYQAEAREALASLPSSPGLLQ 902
Query: 543 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 597
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 903 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 962
Query: 598 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 655
+K +L +L A RWEE+A L K E IIR +++I V LP++ +
Sbjct: 963 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL 1022
Query: 656 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 714
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1023 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 715 VINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1074 QVLTAHSWREKASKTFLKKNSC 1095
Score = 65 (27.9 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 50 (22.7 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 46 (21.3 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 463 (168.0 bits), Expect = 5.1e-40, Sum P(2) = 5.1e-40
Identities = 160/545 (29%), Positives = 252/545 (46%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPH 841
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCL-----HKAENWSSLPGSDSEKVRL 340
AG +M A D +N L ++ L ++AE +L S L
Sbjct: 842 RMAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLL 901
Query: 341 DCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRA 396
+ E G L P LQ E+A+ L E+ L+ ++ L LL + A
Sbjct: 902 QSLLER-G-QQLGVEVPEAQQLQRQVEQAQWL-DEVKRTLAPSARRGTLAVMRGLLVAGA 958
Query: 397 SGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDV 454
S P V+ + L + ++ A+ W + C+ + L + EA ++ + +
Sbjct: 959 SVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHL 1016
Query: 455 PETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHS 512
P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1017 PNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVL 1076
Query: 513 DAIFW 517
A W
Sbjct: 1077 TAHSW 1081
Score = 151 (58.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSLLERGQQLGVEVPEAQQ 920
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAQ-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 142 (55.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 82/380 (21%), Positives = 157/380 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRMA 844
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI-NGRKDQHNVIDELNCI 544
+++ L EL F M L D + ++ + L +
Sbjct: 845 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSL 904
Query: 545 LKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQI 599
L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 905 LERGQQLGVEVPEAQQLQRQVEQAQWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSP 964
Query: 600 EREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQN 657
+K +L +L A RWEE+A L K E II +++I V LP++ ++
Sbjct: 965 AVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKE 1024
Query: 658 EISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVI 716
++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE +
Sbjct: 1025 ALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLELQV 1075
Query: 717 NNCERWQNHAS-SLLQDARC 735
W+ AS + L+ C
Sbjct: 1076 LTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 8.7e-40, Sum P(3) = 8.7e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 5.1e-40, Sum P(2) = 5.1e-40
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 946 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1005
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSTKPSPLASSTTASSATSICVCGQVPAG-VGALQCDLC 1205
Query: 1006 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1064
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTPSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 50 (22.7 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 8.7e-40, Sum P(3) = 8.7e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 46 (21.3 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 405 (147.6 bits), Expect = 5.9e-40, Sum P(3) = 5.9e-40
Identities = 88/213 (41%), Positives = 126/213 (59%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 508 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 567
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 568 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 627
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KG+ ++ G + P+ V CI C +SA C
Sbjct: 628 EMFIMVQEERRLRKALLEKGLSEAKRQGLKTEPKDVRL-----CINCVTTEMMSANPCFV 682
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
+P F+ + H LC+C + + +L R+TL EL
Sbjct: 683 KPFVFILISHXNGLCKCSSSRQYLRSRYTLDEL 715
Score = 103 (41.3 bits), Expect = 5.9e-40, Sum P(3) = 5.9e-40
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 372 LIQEINAALSACSKISELELLYSRAS--GLPICIVESEKLSQRISSAKVWRDSVRKCISN 429
LI N L CS S + L SR + LP + KL R S W VR +
Sbjct: 689 LISHXNG-LCKCS--SSRQYLRSRYTLDELPAML---HKLKVRAESFDTWATKVRVALEV 742
Query: 430 KCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS--- 483
+ ++ L LESEA + + P +++L ++ + +AE+C +R + G +
Sbjct: 743 EDGRKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPD 800
Query: 484 -LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN-GRKDQHNVIDEL 541
+ V++ L EL DF M L D + ++ Q + L
Sbjct: 801 RVAGVQMTLAELQDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLL 860
Query: 542 NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVI 596
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 861 QSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASVA 920
Query: 597 LQIEREKLFIDLSGVLAAAMRWEERA 622
+K +L +L A RWEE+A
Sbjct: 921 PSPAVDKAQAELQELLTIAERWEEKA 946
Score = 77 (32.2 bits), Expect = 3.0e-37, Sum P(3) = 3.0e-37
Identities = 27/127 (21%), Positives = 58/127 (45%)
Query: 607 DLSGVLAAAMRWEERAADILIHKAQMCEF-EDIIRASQDIFVVLPSLDEVQNEISTAKSW 665
D+ G+L ++ A + L+ + + ++ Q + V +P ++Q ++ A+ W
Sbjct: 831 DVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-W 889
Query: 666 LKNSELFLASAFAVAPASCSLLR-LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQN 724
L + LA + + +++R L V+ S + K Q EL++++ ERW+
Sbjct: 890 LDEVKRTLAPS--ARRGTLAIMRGLLVAGASVAPSPAVD---KAQAELQELLTIAERWEE 944
Query: 725 HASSLLQ 731
A L+
Sbjct: 945 KAHLCLE 951
Score = 68 (29.0 bits), Expect = 5.9e-40, Sum P(3) = 5.9e-40
Identities = 25/122 (20%), Positives = 56/122 (45%)
Query: 944 KEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1003
++IV G++ G+LQ + + + + + S + ++C+C + + + L C
Sbjct: 1084 RQIVAFKEGEQKEKEGILQLRRTNSAKPSPLASLTTNSSTASICVCGQVPAG-VGALQCD 1142
Query: 1004 ACKDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIE 1062
C+D +H +C+ P + + P ++E ++ +F PL +R L ++
Sbjct: 1143 LCQDWFHGRCVTVPRLLSSQRSSLTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILA 1199
Query: 1063 LL 1064
LL
Sbjct: 1200 LL 1201
Score = 65 (27.9 bits), Expect = 5.3e-36, Sum P(3) = 5.3e-36
Identities = 34/132 (25%), Positives = 55/132 (41%)
Query: 362 LQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESEK--LSQRISS 415
LQ E+AR L E+ L+ ++ L LL + AS P V+ + L + ++
Sbjct: 880 LQRQVEQARWL-DEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 416 AKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCS 475
A+ W + C+ + PA +LY + +LK M ++G CR C
Sbjct: 939 AERWEEKAHLCLEARSPALSLPAILY-FQILMENLK------KMAWVVLGIPPLCRYICI 991
Query: 476 EALRGSMSLKTV 487
RG + L V
Sbjct: 992 HRSRGRLILVCV 1003
Score = 56 (24.8 bits), Expect = 4.6e-35, Sum P(3) = 4.6e-35
Identities = 39/186 (20%), Positives = 75/186 (40%)
Query: 790 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 843
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 732 WATKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 791
Query: 844 ISA----PCKFK--RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFF 897
+S P + + L+++++ L + + IG++ +++ + +Q + +
Sbjct: 792 VSGQEAGPDRVAGVQMTLAELQDFLGQMNNLPCAMHQ-IGDVKGILEQVEAYQTEAREA- 849
Query: 898 NLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDKN 955
L S L+ L E G+ + PE +++ +V++ W K + S G
Sbjct: 850 -LVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLA 907
Query: 956 SLLGLL 961
+ GLL
Sbjct: 908 IMRGLL 913
Score = 55 (24.4 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSA 1276
C+C + + C C +W+H CV +LLS+
Sbjct: 1127 CVCGQVPAGVGALQCDLCQDWFHGRCVTVPRLLSS 1161
Score = 54 (24.1 bits), Expect = 1.5e-34, Sum P(3) = 1.5e-34
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L V +PE E L+ AI W R +L +
Sbjct: 1194 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLAS 1237
Score = 50 (22.7 bits), Expect = 4.4e-38, Sum P(3) = 4.4e-38
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVS 983
PE E + ++ +W+ R ++++ + + +LLG L +++Q + +KP S++
Sbjct: 1212 PEGEALQCLTERAISWQGRARQVLASE--EVTALLGRLAELRQRLQAE----SKPEESLA 1265
Score = 49 (22.3 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 652 LDEVQNEISTAKSWLKNSELFLASAFAVAPASCS--LLRLESLKDLVSQSKFLKISLKEQ 709
L ++N +S A++ + + L L S P + + L L+D + Q L ++ +
Sbjct: 771 LQRLKNCLSEAEACVSRA-LGLVSGQEAGPDRVAGVQMTLAELQDFLGQMNNLPCAMHQI 829
Query: 710 TELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQL 757
+++ ++ E +Q +AR L GL SL+ + +QL
Sbjct: 830 GDVKGILEQVEAYQT-------EAREALVSQPSSPGLLQSLLERGQQL 870
Score = 44 (20.5 bits), Expect = 1.9e-37, Sum P(3) = 1.9e-37
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A +L ++ LL +
Sbjct: 1193 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGR 1246
Score = 41 (19.5 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 761 MESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDVESLMAVAEGL 817
++S G LG + E +LQ W + L+ PS +A+ GL
Sbjct: 860 LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLA--PSAR--RGTLAIMRGL 912
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 462 (167.7 bits), Expect = 9.8e-40, Sum P(3) = 9.8e-40
Identities = 160/548 (29%), Positives = 252/548 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 508 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 567
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 568 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 627
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 628 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 682
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 683 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 742
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 743 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPH 800
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 801 RVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGLL 860
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 861 QSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLV 914
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 915 AGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIP 972
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 973 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 510 YHSDAIFW 517
A W
Sbjct: 1033 QVLTAHSW 1040
Score = 154 (59.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 822 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 879
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 880 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 939 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 997
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 998 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1046
Score = 143 (55.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 690 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 745
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 746 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 803
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 542
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 804 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 861
Query: 543 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 597
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 862 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 921
Query: 598 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 655
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 922 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 981
Query: 656 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 714
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 982 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 715 VINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1033 QVLTAHSWREKASKTFLKKNSC 1054
Score = 62 (26.9 bits), Expect = 9.8e-40, Sum P(3) = 9.8e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1147 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1182
Score = 50 (22.7 bits), Expect = 8.6e-39, Sum P(2) = 8.6e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1214 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1257
Score = 48 (22.0 bits), Expect = 9.8e-40, Sum P(3) = 9.8e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1007 LDDLEGLVAVGRDLPVGLE-ELRQL 1030
Score = 46 (21.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1213 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1266
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 462 (167.7 bits), Expect = 9.8e-40, Sum P(3) = 9.8e-40
Identities = 160/548 (29%), Positives = 252/548 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 508 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 567
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 568 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 627
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 628 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 682
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 683 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 742
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 743 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPH 800
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 801 RVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGLL 860
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 861 QSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLV 914
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 915 AGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIP 972
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 973 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 510 YHSDAIFW 517
A W
Sbjct: 1033 QVLTAHSW 1040
Score = 154 (59.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 822 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 879
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 880 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 939 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 997
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 998 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1046
Score = 143 (55.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 690 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 745
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 746 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 803
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 542
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 804 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 861
Query: 543 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 597
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 862 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 921
Query: 598 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 655
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 922 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 981
Query: 656 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 714
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 982 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 715 VINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1033 QVLTAHSWREKASKTFLKKNSC 1054
Score = 62 (26.9 bits), Expect = 9.8e-40, Sum P(3) = 9.8e-40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1147 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1182
Score = 49 (22.3 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 525
L+T+ LL L V +PE E L+ AI W R L
Sbjct: 1214 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQAL 1255
Score = 48 (22.0 bits), Expect = 9.8e-40, Sum P(3) = 9.8e-40
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1007 LDDLEGLVAVGRDLPVGLE-ELRQL 1030
Score = 46 (21.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1213 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAFEDVTALLGR 1266
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 462 (167.7 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 160/548 (29%), Positives = 252/548 (45%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPH 841
Query: 291 LWAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEK 337
AG +M A D +N L ++ L + E + +SLP S
Sbjct: 842 RVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGLL 901
Query: 338 VRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLY 393
L LG + + LQ E+AR L E+ L+ ++ L LL
Sbjct: 902 QSLLERGRQLGVEVPEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLV 955
Query: 394 SRASGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK 451
+ AS P V+ + L + ++ A+ W + C+ + L + EA ++
Sbjct: 956 AGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIP 1013
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQ 509
+ +P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1014 VHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 510 YHSDAIFW 517
A W
Sbjct: 1074 QVLTAHSW 1081
Score = 154 (59.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 352 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 408
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 920
Query: 409 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 463
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 576
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 143 (55.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 542
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 902
Query: 543 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 597
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 903 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 962
Query: 598 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 655
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 963 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 1022
Query: 656 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 714
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1023 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 715 VINNCERWQNHAS-SLLQDARC 735
+ W+ AS + L+ C
Sbjct: 1074 QVLTAHSWREKASKTFLKKNSC 1095
Score = 62 (26.9 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1277
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 50 (22.7 bits), Expect = 9.4e-39, Sum P(2) = 9.4e-39
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 527
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 46 (21.3 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 459 (166.6 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 160/545 (29%), Positives = 252/545 (46%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQI 236
P VCL H LC+C + + +L YR+TL EL + L V + ++
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 237 SSSNRPT-----TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQF 290
+ + L + + R S+L+++ +C L + S A G + +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPD 841
Query: 291 LWAGFEMDA--VRDMV---NKLIEGRRWAEGIRDCLHKAENWSS-----LPGSDSEKVRL 340
AG +M +RD + N L ++ L + E + + L S L
Sbjct: 842 RVAGLQMTLAELRDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLL 901
Query: 341 DCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRA 396
+ E G L P LQ E+AR L E+ L+ ++ L LL + A
Sbjct: 902 QSLLER-G-QQLGVEVPEAQQLQRQVEQARWL-DEVKRTLAPSARRGTLAIMRGLLVAGA 958
Query: 397 SGLPICIVESEK--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDV 454
S P V+ + L + ++ A+ W + C+ + L + EA ++ + +
Sbjct: 959 SVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHL 1016
Query: 455 PETDMLLKMIGQAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHS 512
P L + + +A + A E G L +E L+ D V + EL L+
Sbjct: 1017 PNIQSLKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVL 1076
Query: 513 DAIFW 517
A W
Sbjct: 1077 TAHSW 1081
Score = 157 (60.3 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 343 VNELLG-FDPLPCNEPGHLI--LQNYAEEARSLIQEINAAL-SACSKISELELLYSRASG 398
+ + LG + LPC H I ++ E+ + E AL S S L+ L R
Sbjct: 853 LRDFLGQMNNLPCAM--HQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQ 910
Query: 399 LPICIVESEKLSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVP 455
L + + E+++L +++ A+ W D V++ ++ + AI +L S A +D
Sbjct: 911 LGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKA 969
Query: 456 ETDM--LLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSD 513
+ ++ LL + + E C EA R T+E ++ E + V++P ++ LK+ +
Sbjct: 970 QAELQELLTIAERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQSLKEALAK 1028
Query: 514 AIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-RE 572
A WIA +++I NG D + +D+L ++ G L + +++L +E+++ AH RE
Sbjct: 1029 ARAWIADVDEIQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWRE 1083
Query: 573 KALK 576
KA K
Sbjct: 1084 KASK 1087
Score = 157 (60.3 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 84/380 (22%), Positives = 159/380 (41%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 485
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPDRVA 844
Query: 486 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN-GRKDQHNVIDELNCI 544
+++ L EL DF M L D + ++ Q + L +
Sbjct: 845 GLQMTLAELRDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSL 904
Query: 545 LKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQI 599
L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 905 LERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSP 964
Query: 600 EREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQN 657
+K +L +L A RWEE+A L K E II +++I V LP++ ++
Sbjct: 965 AVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQSLKE 1024
Query: 658 EISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVI 716
++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE +
Sbjct: 1025 ALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLELQV 1075
Query: 717 NNCERWQNHAS-SLLQDARC 735
W+ AS + L+ C
Sbjct: 1076 LTAHSWREKASKTFLKKNSC 1095
Score = 59 (25.8 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 946 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1005
IV G++ G+LQ + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLALLTTASSTASICVCGQVPAG-VGALQCDLC 1205
Query: 1006 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1064
+D +H +C+ P + + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 55 (24.4 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1245 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSA 1276
C+C + + C C +W+H CV +LLS+
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVTVPRLLSS 1222
Score = 50 (22.7 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 924 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVS 983
PE E + ++ +W+ R ++++ + + +LLG L +++Q + +KP S++
Sbjct: 1273 PEGEALQCLTERAISWQGRARQVLASE--EVTALLGRLAELRQRLQAE----SKPEESLA 1326
Score = 48 (22.0 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1213 LDKVFELIAEGENLPVYLEKELKSL 1237
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 44 (20.5 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 739
RLE++ L+ + L + L E L+ + WQ A +L ++ LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGR 1307
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 435 (158.2 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 92/213 (43%), Positives = 132/213 (61%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 539 MKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 598
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 599 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHK 658
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KG+ ++ R+ E + +++ CI C+ +LSA+AC
Sbjct: 659 EMFIMVQEERRLRKALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALACYD 713
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P VCL H LC+C + + +L YR+TL EL
Sbjct: 714 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDEL 746
Score = 72 (30.4 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 373 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 432
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 721 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 776
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS-LKTVE 488
+ L LESEA + + P +++L ++ + + E+C A+ + G ++ + T +
Sbjct: 777 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 834
Query: 489 LLLQEL 494
L L EL
Sbjct: 835 LTLTEL 840
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 371 (135.7 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 86/217 (39%), Positives = 117/217 (53%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
++ P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAGFN G
Sbjct: 549 LKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSPYLKR 118
LN AEAVNFAP DWL G + Y + V SH+ELL V A L +S
Sbjct: 609 LNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHE 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL+R+Y K++M RE L R G+ S + E + +E +C C+ L++ A+ C
Sbjct: 669 ELIRIYEKQKMLRELLARLGV--SNRQMQQVMFEKI-PDEQRSCRFCKTTLFMCALVCN- 724
Query: 179 RPAAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 214
+ C+EH +HLC C T+ YR L +L ++
Sbjct: 725 KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
Score = 81 (33.6 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1231 EKELKSLRARSMLYCICRKPY-DEKAMIACYQ-CDEWYHIDCV----KLLSAPEIYICAA 1284
E E KS +AR+ C KPY D + C C W+H+ C+ + ++ Y C++
Sbjct: 1408 ESEFKSCQARA-----CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSS 1462
Query: 1285 CKPQAEESSTPQNVD 1299
C A+ ++ + D
Sbjct: 1463 CLDHADSPTSSVSTD 1477
Score = 76 (31.8 bits), Expect = 2.5e-33, Sum P(4) = 2.5e-33
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1212 SLDKVFELIAEGENLPVYLEKELKSLR-ARSMLYCIC---RKPYDEKAMIACYQCDEWYH 1267
SLD++ + + + + +++K AR + C C K D ++ + C CD +H
Sbjct: 1172 SLDQIVHHQSSLREMQMRIFEKVKQANSARGLEACSCLGFNKSDDSESTLTCIMCDSEFH 1231
Query: 1268 IDCVK----LLSAPE-IYICAAC----KPQAEESSTPQN 1297
+ C + L PE ++C C +P ++ +T N
Sbjct: 1232 VRCCEWSPFLEKLPEGCFLCVRCLRGQRPVIDDVTTALN 1270
Score = 75 (31.5 bits), Expect = 2.5e-33, Sum P(4) = 2.5e-33
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 852 RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCA---QQSWS 907
RC+ +D G + + + LT I K + W EQV + N K A +Q +S
Sbjct: 844 RCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRAKDAIYREQEYS 903
Query: 908 LMLQLKELGEAAAFDCPELEKV--LSKVDKVENWKQRCKEI 946
K + E +D +LE++ L KV ++++W R +++
Sbjct: 904 KEEIEKIIEEGDEYDI-KLEEIDELRKVIQMKDWSDRARKV 943
Score = 73 (30.8 bits), Expect = 4.0e-33, Sum P(4) = 4.0e-33
Identities = 51/316 (16%), Positives = 132/316 (41%)
Query: 405 ESEKLSQRISSAKVWR--DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLK 462
ES+++ + K+ R + + NK P + D ++KL + K + + + LL
Sbjct: 778 ESDEMLEEEGKPKLERIEEFIDSAKQNKYP---QTDQVHKLITIRHTAKSAIEKANQLLF 834
Query: 463 MIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHSDAIFWIARL 521
+ + + RC A + + V L++++ N+ + + L+++ W R
Sbjct: 835 KKVRTRT-KTRCQRADTRT-DTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRA 892
Query: 522 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTK 581
D + ++Q +E+ I++EG I+++++ + ++ ++A K K
Sbjct: 893 KDAIY-----REQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDRARKVTTWK 947
Query: 582 MPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRA 641
D + + E + + L + + + + + ++ QM + +
Sbjct: 948 ATPDMEKDIDFEYKLRYASSDILSL----IRDSPRNPTDGTSKLVFELQQMLRDANTLEV 1003
Query: 642 SQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKF 701
+ F P+LD++Q S +S L+ ++ F + ++ + +K ++ +
Sbjct: 1004 IANNFCENPALDQLQ---SIWQS-LRETDWFYEKYINMV--RYEIIHVAKIKSMIDAAIP 1057
Query: 702 LKISLKEQTELEKVIN 717
+ +T+L+K++N
Sbjct: 1058 VLSEFDLKTQLQKIVN 1073
Score = 62 (26.9 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 618 WEERAADILIH--KAQMCEFEDII-RASQDIFVVLPSLDEVQNEIS---TAKSWL-KNSE 670
W+E + ++L K ++ E+ I A Q+ + P D+V I+ TAKS + K ++
Sbjct: 775 WKEESDEMLEEEGKPKLERIEEFIDSAKQNKY---PQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 671 LFLASAFAVAPASC----SLLRLESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNH 725
L C + E ++ L+ Q + + +L + LEK + E W+N
Sbjct: 832 LLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNR 891
Query: 726 ASSLL 730
A +
Sbjct: 892 AKDAI 896
Score = 62 (26.9 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 690 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ-DARCLLDKDDIGDGLSN 748
E ++ ++ + I L+E EL KVI + W + A + A ++KD +
Sbjct: 905 EEIEKIIEEGDEYDIKLEEIDELRKVIQ-MKDWSDRARKVTTWKATPDMEKDIDFEYKLR 963
Query: 749 SLVSKIEQLITSMESAANCGLS-LGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 807
S I LI G S L F+ ++ L++A +TL A +F +P+L+ +
Sbjct: 964 YASSDILSLIRDSPRNPTDGTSKLVFELQQM--LRDA-NTLEVI--ANNFCE-NPALDQL 1017
Query: 808 ESL-MAVAE-GLSTRCFSSMLWNSLIHGVK---WLKRALEVISA-PCKFKRCKLSDVEEV 861
+S+ ++ E + +M+ +IH K + A+ V+S K + K+ +VE
Sbjct: 1018 QSIWQSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQKIVNVEIT 1077
Query: 862 LAGCKGINFSFPV---VIGE-----LTSAIQKHKLWQEQVHQFFNLKCAQQS-WSLMLQL 912
L+ I+ +F + G + I + +++ F A + + ++ +
Sbjct: 1078 LSKAAEISKAFETSKCLNGSEEHLGILDMISTMNAFTQRIAILFKPNNAYHNLFEILSER 1137
Query: 913 KELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSLLGLLQKIKQSVHRS 971
+L A L V + W Q + E + V ++SL + +I + V ++
Sbjct: 1138 DDLTPLAEGQTIPLYFQGGAVHPSDEWHQMKEFESLDQIVHHQSSLREMQMRIFEKVKQA 1197
Query: 972 LYIYNKPHGSVSMTLCMCC---ESDSKELEFLICSACKDCYHLQCLRPTE-VDRNHAEAY 1027
N G + C C +SD E L C C +H++C + +++ +
Sbjct: 1198 ----NSARG---LEACSCLGFNKSDDSE-STLTCIMCDSEFHVRCCEWSPFLEKLPEGCF 1249
Query: 1028 ICPYC 1032
+C C
Sbjct: 1250 LCVRC 1254
Score = 61 (26.5 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 989 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + +++C A CK+ +H+ CL T + N Y C C
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSC 1463
Score = 57 (25.1 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGS-----QWADV 1200
W +V ++ K I + Q Y KE + I D Y KL E++ + W+D
Sbjct: 881 WMEQV-EMWRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDR 939
Query: 1201 AKKVVLDSGALSLDK 1215
A+KV ++K
Sbjct: 940 ARKVTTWKATPDMEK 954
Score = 50 (22.7 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1238
W + AK + S +++ ++I EG+ + LE E+ LR
Sbjct: 888 WRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLE-EIDELR 928
Score = 50 (22.7 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 881 SAIQK-HKLWQEQVHQFFNLKCAQQSWSLMLQ-LKELGEAA-AFDCPELEKVLSKVDK-- 935
SAI+K ++L ++V +C + + ++ L E A DC L ++ K++K
Sbjct: 824 SAIEKANQLLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDC-NLTVIIDKLEKWM 882
Query: 936 --VENWKQRCKEIV 947
VE W+ R K+ +
Sbjct: 883 EQVEMWRNRAKDAI 896
Score = 45 (20.9 bits), Expect = 3.0e-30, Sum P(4) = 3.0e-30
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 1144 NLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKK 1203
N W+ ++LE KP + +I+ ++ + N P+ KL+ + + A +
Sbjct: 773 NGWKEESDEMLEEEGKPKLERIEEFI-DSAKQNKYPQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1204 VV 1205
++
Sbjct: 832 LL 833
Score = 44 (20.5 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1063 LLSDSEFFCRGIEAKDVLQEVVDVALECKTCL 1094
++ DSEF R E L+++ + C CL
Sbjct: 1224 IMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCL 1255
Score = 39 (18.8 bits), Expect = 2.5e-33, Sum P(4) = 2.5e-33
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1311 KTPSPKHTNSRKKLRKAE 1328
K PS H + KK RK +
Sbjct: 1379 KRPSVSHKETSKKSRKRQ 1396
Score = 38 (18.4 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 1220 IAEGENLPVYLE 1231
+AEG+ +P+Y +
Sbjct: 1143 LAEGQTIPLYFQ 1154
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 371 (135.7 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 86/217 (39%), Positives = 117/217 (53%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
++ P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAGFN G
Sbjct: 549 LKKIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSPYLKR 118
LN AEAVNFAP DWL G + Y + V SH+ELL V A L +S
Sbjct: 609 LNFAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHE 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL+R+Y K++M RE L R G+ S + E + +E +C C+ L++ A+ C
Sbjct: 669 ELIRIYEKQKMLRELLARLGV--SNRQMQQVMFEKI-PDEQRSCRFCKTTLFMCALVCN- 724
Query: 179 RPAAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 214
+ C+EH +HLC C T+ YR L +L ++
Sbjct: 725 KHKKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
Score = 81 (33.6 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1231 EKELKSLRARSMLYCICRKPY-DEKAMIACYQ-CDEWYHIDCV----KLLSAPEIYICAA 1284
E E KS +AR+ C KPY D + C C W+H+ C+ + ++ Y C++
Sbjct: 1408 ESEFKSCQARA-----CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSS 1462
Query: 1285 CKPQAEESSTPQNVD 1299
C A+ ++ + D
Sbjct: 1463 CLDHADSPTSSVSTD 1477
Score = 76 (31.8 bits), Expect = 2.5e-33, Sum P(4) = 2.5e-33
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1212 SLDKVFELIAEGENLPVYLEKELKSLR-ARSMLYCIC---RKPYDEKAMIACYQCDEWYH 1267
SLD++ + + + + +++K AR + C C K D ++ + C CD +H
Sbjct: 1172 SLDQIVHHQSSLREMQMRIFEKVKQANSARGLEACSCLGFNKSDDSESTLTCIMCDSEFH 1231
Query: 1268 IDCVK----LLSAPE-IYICAAC----KPQAEESSTPQN 1297
+ C + L PE ++C C +P ++ +T N
Sbjct: 1232 VRCCEWSPFLEKLPEGCFLCVRCLRGQRPVIDDVTTALN 1270
Score = 75 (31.5 bits), Expect = 2.5e-33, Sum P(4) = 2.5e-33
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 852 RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCA---QQSWS 907
RC+ +D G + + + LT I K + W EQV + N K A +Q +S
Sbjct: 844 RCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRAKDAIYREQEYS 903
Query: 908 LMLQLKELGEAAAFDCPELEKV--LSKVDKVENWKQRCKEI 946
K + E +D +LE++ L KV ++++W R +++
Sbjct: 904 KEEIEKIIEEGDEYDI-KLEEIDELRKVIQMKDWSDRARKV 943
Score = 73 (30.8 bits), Expect = 4.0e-33, Sum P(4) = 4.0e-33
Identities = 51/316 (16%), Positives = 132/316 (41%)
Query: 405 ESEKLSQRISSAKVWR--DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLK 462
ES+++ + K+ R + + NK P + D ++KL + K + + + LL
Sbjct: 778 ESDEMLEEEGKPKLERIEEFIDSAKQNKYP---QTDQVHKLITIRHTAKSAIEKANQLLF 834
Query: 463 MIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHSDAIFWIARL 521
+ + + RC A + + V L++++ N+ + + L+++ W R
Sbjct: 835 KKVRTRT-KTRCQRADTRT-DTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRA 892
Query: 522 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTK 581
D + ++Q +E+ I++EG I+++++ + ++ ++A K K
Sbjct: 893 KDAIY-----REQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDRARKVTTWK 947
Query: 582 MPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRA 641
D + + E + + L + + + + + ++ QM + +
Sbjct: 948 ATPDMEKDIDFEYKLRYASSDILSL----IRDSPRNPTDGTSKLVFELQQMLRDANTLEV 1003
Query: 642 SQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKF 701
+ F P+LD++Q S +S L+ ++ F + ++ + +K ++ +
Sbjct: 1004 IANNFCENPALDQLQ---SIWQS-LRETDWFYEKYINMV--RYEIIHVAKIKSMIDAAIP 1057
Query: 702 LKISLKEQTELEKVIN 717
+ +T+L+K++N
Sbjct: 1058 VLSEFDLKTQLQKIVN 1073
Score = 62 (26.9 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 618 WEERAADILIH--KAQMCEFEDII-RASQDIFVVLPSLDEVQNEIS---TAKSWL-KNSE 670
W+E + ++L K ++ E+ I A Q+ + P D+V I+ TAKS + K ++
Sbjct: 775 WKEESDEMLEEEGKPKLERIEEFIDSAKQNKY---PQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 671 LFLASAFAVAPASC----SLLRLESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNH 725
L C + E ++ L+ Q + + +L + LEK + E W+N
Sbjct: 832 LLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNR 891
Query: 726 ASSLL 730
A +
Sbjct: 892 AKDAI 896
Score = 62 (26.9 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 690 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ-DARCLLDKDDIGDGLSN 748
E ++ ++ + I L+E EL KVI + W + A + A ++KD +
Sbjct: 905 EEIEKIIEEGDEYDIKLEEIDELRKVIQ-MKDWSDRARKVTTWKATPDMEKDIDFEYKLR 963
Query: 749 SLVSKIEQLITSMESAANCGLS-LGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 807
S I LI G S L F+ ++ L++A +TL A +F +P+L+ +
Sbjct: 964 YASSDILSLIRDSPRNPTDGTSKLVFELQQM--LRDA-NTLEVI--ANNFCE-NPALDQL 1017
Query: 808 ESL-MAVAE-GLSTRCFSSMLWNSLIHGVK---WLKRALEVISA-PCKFKRCKLSDVEEV 861
+S+ ++ E + +M+ +IH K + A+ V+S K + K+ +VE
Sbjct: 1018 QSIWQSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQKIVNVEIT 1077
Query: 862 LAGCKGINFSFPV---VIGE-----LTSAIQKHKLWQEQVHQFFNLKCAQQS-WSLMLQL 912
L+ I+ +F + G + I + +++ F A + + ++ +
Sbjct: 1078 LSKAAEISKAFETSKCLNGSEEHLGILDMISTMNAFTQRIAILFKPNNAYHNLFEILSER 1137
Query: 913 KELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSLLGLLQKIKQSVHRS 971
+L A L V + W Q + E + V ++SL + +I + V ++
Sbjct: 1138 DDLTPLAEGQTIPLYFQGGAVHPSDEWHQMKEFESLDQIVHHQSSLREMQMRIFEKVKQA 1197
Query: 972 LYIYNKPHGSVSMTLCMCC---ESDSKELEFLICSACKDCYHLQCLRPTE-VDRNHAEAY 1027
N G + C C +SD E L C C +H++C + +++ +
Sbjct: 1198 ----NSARG---LEACSCLGFNKSDDSE-STLTCIMCDSEFHVRCCEWSPFLEKLPEGCF 1249
Query: 1028 ICPYC 1032
+C C
Sbjct: 1250 LCVRC 1254
Score = 61 (26.5 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 989 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C + + +++C A CK+ +H+ CL T + N Y C C
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSC 1463
Score = 57 (25.1 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGS-----QWADV 1200
W +V ++ K I + Q Y KE + I D Y KL E++ + W+D
Sbjct: 881 WMEQV-EMWRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDR 939
Query: 1201 AKKVVLDSGALSLDK 1215
A+KV ++K
Sbjct: 940 ARKVTTWKATPDMEK 954
Score = 50 (22.7 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1197 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1238
W + AK + S +++ ++I EG+ + LE E+ LR
Sbjct: 888 WRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLE-EIDELR 928
Score = 50 (22.7 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 881 SAIQK-HKLWQEQVHQFFNLKCAQQSWSLMLQ-LKELGEAA-AFDCPELEKVLSKVDK-- 935
SAI+K ++L ++V +C + + ++ L E A DC L ++ K++K
Sbjct: 824 SAIEKANQLLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDC-NLTVIIDKLEKWM 882
Query: 936 --VENWKQRCKEIV 947
VE W+ R K+ +
Sbjct: 883 EQVEMWRNRAKDAI 896
Score = 45 (20.9 bits), Expect = 3.0e-30, Sum P(4) = 3.0e-30
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 1144 NLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKK 1203
N W+ ++LE KP + +I+ ++ + N P+ KL+ + + A +
Sbjct: 773 NGWKEESDEMLEEEGKPKLERIEEFI-DSAKQNKYPQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1204 VV 1205
++
Sbjct: 832 LL 833
Score = 44 (20.5 bits), Expect = 8.4e-35, Sum P(5) = 8.4e-35
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1063 LLSDSEFFCRGIEAKDVLQEVVDVALECKTCL 1094
++ DSEF R E L+++ + C CL
Sbjct: 1224 IMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCL 1255
Score = 39 (18.8 bits), Expect = 2.5e-33, Sum P(4) = 2.5e-33
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1311 KTPSPKHTNSRKKLRKAE 1328
K PS H + KK RK +
Sbjct: 1379 KRPSVSHKETSKKSRKRQ 1396
Score = 38 (18.4 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 1220 IAEGENLPVYLE 1231
+AEG+ +P+Y +
Sbjct: 1143 LAEGQTIPLYFQ 1154
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 332 (121.9 bits), Expect = 3.5e-34, Sum P(4) = 3.5e-34
Identities = 82/210 (39%), Positives = 112/210 (53%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR ++P+LF QPDLLFQLVT+L P L + GV VY++ Q G FVITFP++YHAGFN G
Sbjct: 683 MREAIPELFATQPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAGFNHG 742
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCV----VAKSDLDSKVSPYL 116
N EAVNFAP+DW P G G + QQ+ + SH+ELL +A L + + +L
Sbjct: 743 FNFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQTAKWL 802
Query: 117 KRELLRVYTKERMWRERLWRK------------GIIKSTPMGPRKCPEYVGTEEDPTCII 164
L R++++E R+ K G S+ + K + EE+ C
Sbjct: 803 APALERIHSRELAQRQAFVTKHKDLAQHSCAITGGEDSSCLLSFKVEDEDVPEEEYQCGY 862
Query: 165 CRQYLYLSAVACRCRPAAFVCLEH-WEHLC 193
C+ Y YLS C + +CL H H C
Sbjct: 863 CKVYTYLSRFKC-LKSGQVLCLLHAGHHAC 891
Score = 109 (43.4 bits), Expect = 5.1e-31, Sum P(5) = 5.1e-31
Identities = 76/360 (21%), Positives = 153/360 (42%)
Query: 618 WEERAADILIHKA--QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLA- 674
WEE+ IL +A + +++ + I LPSL ++ + W++++ + A
Sbjct: 933 WEEKYDKILSEEATPSLKSLRNLLNEGEKIPFNLPSLAMLKTFVERCNRWVEDAANYTAR 992
Query: 675 ---------SAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNH 725
++ + S ++ +++ S S K+ TE E++ +C
Sbjct: 993 KQQNRRKTDKSWRASIGKASDIQEPKDREVRSVSHMYKL----MTEAEQLGFDCPE---- 1044
Query: 726 ASSLLQDARCL-LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNA 784
S L + A + + +++ L +S S Q I ++E G S D E+ +L +
Sbjct: 1045 ISQLQERAEAIKVFQENAQRVLEHSSTST--QSIDTVEELLEEGHSFNVDIPEVEKLSHV 1102
Query: 785 CSTLHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSML--WNSLIH-GVKWLKRAL 841
L W +KA SL +V+ L+ L R ++ + +N ++ G +W ++A
Sbjct: 1103 LDQLKWSQKARQKRGTFISLNEVKELIEEGNRLGIRSYNDHMVHYNDQLNAGEQWERKAQ 1162
Query: 842 EVISAPCKFKRCKLSDVEEVLAGCKGINFSFPV---VIGELTSAIQKHKLWQEQVHQFFN 898
E+I+A +L E L+ +N + PV + E+ + K + Q+ Q N
Sbjct: 1163 EIINADA-IHYAQL----EALSQQATVN-ALPVSQATLAEVDRILFKQREALGQI-QDLN 1215
Query: 899 LKCAQ----------QSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVG 948
+C + +M +++EL + PELEK + + E+W ++ K++ G
Sbjct: 1216 ARCRNADHRKRPMYAEVCEIMKKVEEL-QHKPNGTPELEK---EQRRHEDWMRKGKKLFG 1271
Score = 103 (41.3 bits), Expect = 3.5e-34, Sum P(4) = 3.5e-34
Identities = 37/119 (31%), Positives = 53/119 (44%)
Query: 406 SEKLSQRISSAKVWRDSVRKCISNKCPAAIEI-DV--LYKLESEALDLKIDVPETDMLLK 462
+ K R + K WR S+ K + P E+ V +YKL +EA L D PE L +
Sbjct: 991 ARKQQNRRKTDKSWRASIGKASDIQEPKDREVRSVSHMYKLMTEAEQLGFDCPEISQLQE 1050
Query: 463 MIGQAESCRARCSEALRGS----MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 517
+ + L S S+ TVE LL+E F V++PE+E L D + W
Sbjct: 1051 RAEAIKVFQENAQRVLEHSSTSTQSIDTVEELLEEGHSFNVDIPEVEKLSHV-LDQLKW 1108
Score = 95 (38.5 bits), Expect = 1.3e-29, Sum P(5) = 1.3e-29
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
+S + L + A L E +L +R + KV++++ ++ + + + ID + +L
Sbjct: 1025 VSHMYKLMTEAEQLGFDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSIDTVEELLE 1084
Query: 446 EALDLKIDVPETDMLLKMIGQAE-SCRARCSEALRGS-MSLKTVELLLQE 493
E +D+PE + L ++ Q + S +AR RG+ +SL V+ L++E
Sbjct: 1085 EGHSFNVDIPEVEKLSHVLDQLKWSQKARQK---RGTFISLNEVKELIEE 1131
Score = 92 (37.4 bits), Expect = 3.5e-34, Sum P(4) = 3.5e-34
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1243 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK---PQAEESSTP 1295
++CICR+ + MI C C EWYH C+K+ + + Y C C P ++S P
Sbjct: 1332 VFCICRRT-EAGMMIECELCHEWYHGKCLKVARGKIREDDKYTCPICDWRVPIPRDASRP 1390
Query: 1296 QNVD 1299
D
Sbjct: 1391 NLED 1394
Score = 73 (30.8 bits), Expect = 7.7e-28, Sum P(6) = 7.7e-28
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
IG+A + +R S+ + L+ E + PE+ L++ ++AI
Sbjct: 1008 IGKASDIQEPKDREVR---SVSHMYKLMTEAEQLGFDCPEISQLQE-RAEAIKVFQENAQ 1063
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 583
++ + Q ID + +L+EG S + + ++ + L + +KA + T +
Sbjct: 1064 RVLEHSSTSTQS--IDTVEELLEEGHSFNVDIPEVEKLSHVLDQLKWSQKARQKRGTFIS 1121
Query: 584 LDFIRQVTAEAVILQIER-EKLFIDLSGVLAAAMRWEERAADIL----IHKAQM 632
L+ ++++ E L I + + L A +WE +A +I+ IH AQ+
Sbjct: 1122 LNEVKELIEEGNRLGIRSYNDHMVHYNDQLNAGEQWERKAQEIINADAIHYAQL 1175
Score = 71 (30.1 bits), Expect = 5.1e-31, Sum P(5) = 5.1e-31
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1034
C+C +++ + + C C + YH +CL+ + Y CP C +
Sbjct: 1334 CICRRTEAGMM--IECELCHEWYHGKCLKVARGKIREDDKYTCPICDW 1379
Score = 65 (27.9 bits), Expect = 6.8e-31, Sum P(4) = 6.8e-31
Identities = 34/128 (26%), Positives = 65/128 (50%)
Query: 1106 DKDLHVISNKLTITLKAREAAGVFDRQSNSAL-DFALARNLWRVRVSKLLEGLTKPT--I 1162
D+++ +S+ + +A E G FD S L + A A +++ ++LE + T I
Sbjct: 1019 DREVRSVSHMYKLMTEA-EQLG-FDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSI 1076
Query: 1163 GQIQNYLKEGLLMNISPKDHYRQKLME-LNRIGSQWADVAKKVVLDSGA-LSLDKVFELI 1220
++ L+EG N+ + +KL L+++ +W+ A++ G +SL++V ELI
Sbjct: 1077 DTVEELLEEGHSFNVDIPEV--EKLSHVLDQL--KWSQKARQ---KRGTFISLNEVKELI 1129
Query: 1221 AEGENLPV 1228
EG L +
Sbjct: 1130 EEGNRLGI 1137
Score = 65 (27.9 bits), Expect = 1.5e-26, Sum P(5) = 1.5e-26
Identities = 64/301 (21%), Positives = 125/301 (41%)
Query: 283 LLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDC 342
L+ EAEQ GF+ + + + AE I+ A+ L S + +D
Sbjct: 1031 LMTEAEQL---GFDCPEISQLQER-------AEAIKVFQENAQR--VLEHSSTSTQSIDT 1078
Query: 343 VNELL----GFD-PLPCNEP-GHLILQ-NYAEEARSLIQEINAALSACSKISELELLYSR 395
V ELL F+ +P E H++ Q ++++AR Q+ +S ++E++ L
Sbjct: 1079 VEELLEEGHSFNVDIPEVEKLSHVLDQLKWSQKAR---QKRGTFIS----LNEVKELIEE 1131
Query: 396 ASGLPICIVESEKL--SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES-EALDL-K 451
+ L I + + ++++ + W ++ I+ +++ L + + AL + +
Sbjct: 1132 GNRLGIRSYNDHMVHYNDQLNAGEQWERKAQEIINADAIHYAQLEALSQQATVNALPVSQ 1191
Query: 452 IDVPETDMLL----KMIGQAESCRARCSEA--LRGSMSLKTVELL--LQELGDFTVNMPE 503
+ E D +L + +GQ + ARC A + M + E++ ++EL PE
Sbjct: 1192 ATLAEVDRILFKQREALGQIQDLNARCRNADHRKRPMYAEVCEIMKKVEELQHKPNGTPE 1251
Query: 504 LELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEV 563
LE ++ H D W+ + + N H + L +L+ + D P V
Sbjct: 1252 LEKEQRRHED---WMRKGKKLFGKTNA--PLHILKSHLEYVLERNSDCFDIGHDKPRVPA 1306
Query: 564 E 564
E
Sbjct: 1307 E 1307
Score = 59 (25.8 bits), Expect = 4.8e-27, Sum P(6) = 4.8e-27
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 904 QSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSL 957
+S S M +L E FDCPE+ ++ + + ++ +++ + ++ S S+
Sbjct: 1023 RSVSHMYKLMTEAEQLGFDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSI 1076
Score = 54 (24.1 bits), Expect = 6.8e-31, Sum P(4) = 6.8e-31
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 483 SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQH 535
SLK++ LL E N+P L +LK + W+ + N RK Q+
Sbjct: 948 SLKSLRNLLNEGEKIPFNLPSLAMLKTFVERCNRWV----EDAANYTARKQQN 996
Score = 52 (23.4 bits), Expect = 5.2e-29, Sum P(3) = 5.2e-29
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1123 REAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYLKEG 1172
R+A + D A W + K+L P++ ++N L EG
Sbjct: 910 RKAEDIIAATYKKVADKASVPEAWEEKYDKILSEEATPSLKSLRNLLNEG 959
Score = 51 (23.0 bits), Expect = 6.6e-29, Sum P(3) = 6.6e-29
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 1185 QKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
+K+ + + W + K++ + SL + L+ EGE +P L
Sbjct: 921 KKVADKASVPEAWEEKYDKILSEEATPSLKSLRNLLNEGEKIPFNL 966
Score = 49 (22.3 bits), Expect = 3.5e-28, Sum P(5) = 3.5e-28
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 681 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNH 725
P S LE L + L +E+ L+++I+N + ++NH
Sbjct: 1384 PRDASRPNLEDLLSWYDEIPGLPFQPEEEGVLKQIIDNAQDFRNH 1428
Score = 49 (22.3 bits), Expect = 2.6e-22, Sum P(4) = 2.6e-22
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDV----LY 441
+ +L Y GLP E L Q I +A+ +R+ + +N A E++ L
Sbjct: 1392 LEDLLSWYDEIPGLPFQPEEEGVLKQIIDNAQDFRNHIGPYCNNPMATASEVETQRFYLR 1451
Query: 442 KLE 444
KLE
Sbjct: 1452 KLE 1454
Score = 48 (22.0 bits), Expect = 3.5e-34, Sum P(4) = 3.5e-34
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 1161 TIGQIQNYLKEGLLMNI-SPKDHYRQKLMELNRIGSQWADVAKKVV 1205
++ +++ ++EG + I S DH +LN G QW A++++
Sbjct: 1121 SLNEVKELIEEGNRLGIRSYNDHMVHYNDQLNA-GEQWERKAQEII 1165
Score = 48 (22.0 bits), Expect = 7.7e-28, Sum P(6) = 7.7e-28
Identities = 18/87 (20%), Positives = 37/87 (42%)
Query: 391 LLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDL 450
+LY +A I +K++ + S + W + K +S + +++ L L +E +
Sbjct: 907 ILYRKAED--IIAATYKKVADKASVPEAWEEKYDKILSEEATPSLKS--LRNLLNEGEKI 962
Query: 451 KIDVPETDMLLKMIGQAESCRARCSEA 477
++P ML + E C +A
Sbjct: 963 PFNLPSLAMLKTFV---ERCNRWVEDA 986
Score = 40 (19.1 bits), Expect = 5.1e-31, Sum P(5) = 5.1e-31
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 1287 PQAEESSTPQNVDGGRTNAEFLEPKTP--SPK--HTN-SRKKLRKAEP 1329
P + + STP G T+ P P SP H L +A+P
Sbjct: 1575 PSSSQPSTPGLPMAGSTHGHASRPSEPGQSPSLVHRQPGESPLNRADP 1622
Score = 38 (18.4 bits), Expect = 5.1e-31, Sum P(5) = 5.1e-31
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 1042 QFGGSPLRFGGKRS 1055
Q GS RFGG RS
Sbjct: 1557 QTPGSAHRFGGDRS 1570
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 415 (151.1 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 88/229 (38%), Positives = 131/229 (57%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ LPDLF+ QPDLL QLVT L+P +L E GVPVY +Q G F++TFP++YH+GFN G
Sbjct: 344 MKKRLPDLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCG 403
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKS--------DLDSKV 112
NCAEAVN AP DWL HG + Y + + + LSH++LL A L K
Sbjct: 404 FNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKK 463
Query: 113 SPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGP-------RKCPEYVGTEEDPTCIIC 165
+P + R RV +++ + + + ++ ++ + RK + + C +C
Sbjct: 464 TPVIAR-WKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERECFLC 522
Query: 166 RQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
L++SA +C+C P F CL H + LC C+++ ++L RHTL EL+ L
Sbjct: 523 FYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDELWAL 571
Score = 43 (20.2 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 1033 QYFESESVSQFGGSPLRFGGK 1053
+Y+ ++V FG P++ G K
Sbjct: 871 EYWNQKAVKLFGAEPIKEGEK 891
Score = 42 (19.8 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 25/116 (21%), Positives = 54/116 (46%)
Query: 1099 KFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLT 1158
K + C KD + +N+L+++++ + + ++ + A+ ++ RV K L L
Sbjct: 713 KVDGCLGGKDQNAATNRLSLSVELLSSGSLVVKKLWCSKQ-AIYPKGFKSRV-KFLSVLD 770
Query: 1159 KPTIGQIQNYLKE----GLL---MNISPKDHYRQKLMELNRIGSQWADVAKKVVLD 1207
PT + NY+ E GLL +S +D+ + ++ W V +++ L+
Sbjct: 771 -PT--NLTNYISEVLDAGLLGPLFRVSVEDYPTENFSNVSA-EKCWQMVTQRLKLE 822
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 329 (120.9 bits), Expect = 7.2e-33, Sum P(3) = 7.2e-33
Identities = 78/209 (37%), Positives = 110/209 (52%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR ++P+LF+ QPDLLFQLVT++ P L + GV VY++ Q G FVITFP++YHAGFN G
Sbjct: 677 MRQAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGFNHG 736
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKREL 120
N EAVNFAP DW P G G + Q + + SH+ELL A D + +L L
Sbjct: 737 FNFNEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKWLAPAL 796
Query: 121 LRVYTKERMWRERLWRK---------GIIK--STPMGPRKCPEYVGT----EEDPTCIIC 165
R ++E R ++ ++ S P G + + EED C C
Sbjct: 797 QRTCSRELAERASFAKRHQEATPHNCALLTDDSAPTGECQLGFLIEDKDLPEEDYQCHYC 856
Query: 166 RQYLYLSAVACRCRPAAFVCLEHWE-HLC 193
+ Y++L+ C + +CL H + H C
Sbjct: 857 KAYIFLTQFKCH-KSGKTLCLVHLDAHDC 884
Score = 98 (39.6 bits), Expect = 7.2e-33, Sum P(3) = 7.2e-33
Identities = 49/198 (24%), Positives = 85/198 (42%)
Query: 317 IRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSL--IQ 374
++ + K + S +P + +K LD +L DP P + H +L + L +Q
Sbjct: 909 LKSMVLKVQERSRIPEAWGQK--LD---NILEDDPKPQLKVLHNLLNEGEKIPYHLPGLQ 963
Query: 375 EINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC--ISNKCP 432
E+ A + C K E Y + K R + K WR + K + +
Sbjct: 964 ELAAFVQRCDKWVEEATNYI-----------TRKQQNRRKNEKAWRKTTSKASQLEERDR 1012
Query: 433 AAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG--SMSLKTVELL 490
++ +Y L +EA L D P+ L + + E R S AL + S++ VE L
Sbjct: 1013 EVRRVENIYALLAEADKLSFDCPQMAALEEKTREIEKFRLDVSAALANPHTRSIQEVEEL 1072
Query: 491 LQELGDFTVNMPELELLK 508
++ +F V++PE+E L+
Sbjct: 1073 VENSRNFNVDLPEVEDLE 1090
Score = 86 (35.3 bits), Expect = 7.2e-33, Sum P(3) = 7.2e-33
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1239 ARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP----EIYICAAC 1285
A+ ++CICR + MI C C EWYH C+K+ + Y C C
Sbjct: 1318 AKRDVFCICRHS-EAGMMIECEICGEWYHGKCLKIARGKVKECDKYTCPIC 1367
Score = 74 (31.1 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1034
C+C S++ + + C C + YH +CL+ + Y CP C +
Sbjct: 1324 CICRHSEAGMM--IECEICGEWYHGKCLKIARGKVKECDKYTCPICDW 1369
Score = 71 (30.1 bits), Expect = 4.5e-30, Sum P(3) = 4.5e-30
Identities = 67/381 (17%), Positives = 153/381 (40%)
Query: 618 WEERAADILIH--KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 675
W ++ +IL K Q+ +++ + I LP L E+ + W++ + ++
Sbjct: 926 WGQKLDNILEDDPKPQLKVLHNLLNEGEKIPYHLPGLQELAAFVQRCDKWVEEATNYITR 985
Query: 676 AFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ-----TELEKVINNCERWQNHASSLL 730
+ R + K + + ++ E E +K+ +C + + L
Sbjct: 986 KQQNRRKNEKAWRKTTSKASQLEERDREVRRVENIYALLAEADKLSFDCPQM-----AAL 1040
Query: 731 QDARCLLDKD--DIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTL 788
++ ++K D+ L+N I+++ +E++ N + D E+ +L++ +
Sbjct: 1041 EEKTREIEKFRLDVSAALANPHTRSIQEVEELVENSRNFNV----DLPEVEDLEHIVRQM 1096
Query: 789 HWCKKALSFLSVSPSLEDVESLMAVAE--GLSTRCFSSMLWNSLI-HGVKWLKRALEVIS 845
W + A +L+D + L+ E GLS + L HG W +A E++S
Sbjct: 1097 KWNEDAGRRRGQYLTLKDCQELILAGEQLGLSEANEHLAHFKDLCRHGEAWEAKAKELMS 1156
Query: 846 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK----- 900
+ +E + A + S P + + + + K + Q+++ +
Sbjct: 1157 V----EAVHYQQLEALSAQANRVPVS-PETLAAVDAILTKQREAQKRIQSLYERSKDPDY 1211
Query: 901 ----CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNS 956
++ LM L+EL +LE+ + + E+W ++ K++ G + N+
Sbjct: 1212 KKRPLYKEVRELMESLEELNSRPT-GAIDLER---EQKRHEDWMRKGKKLFGKA----NA 1263
Query: 957 LLGLLQKIKQSVH-RSLYIYN 976
L +L+ + V R+ Y ++
Sbjct: 1264 PLHILKSHMEYVEKRNFYCFD 1284
Score = 59 (25.8 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 1186 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1230
K+ E +RI W ++ D L + L+ EGE +P +L
Sbjct: 915 KVQERSRIPEAWGQKLDNILEDDPKPQLKVLHNLLNEGEKIPYHL 959
Score = 52 (23.4 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 381 SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVL 440
+A K+ +L+ S LP E + L + I+ A +R+ +++ + C E+ L
Sbjct: 1377 AARPKLEDLQEWQSEIPSLPFQPDEEQILERIINQATAFREFLQRYTNTACTTTEEVPTL 1436
Query: 441 --YKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLK 485
Y + E ++ + ET++ + I + + L S+S +
Sbjct: 1437 VFYLRKIEGAEVLLAY-ETNLFRQEIHKWQPVAPEPPPILEQSLSTR 1482
Score = 48 (22.0 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 31/147 (21%), Positives = 63/147 (42%)
Query: 385 KISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLE 444
++ + L + A L + L ++ + +R V ++N P I + +L
Sbjct: 1016 RVENIYALLAEADKLSFDCPQMAALEEKTREIEKFRLDVSAALAN--PHTRSIQEVEELV 1073
Query: 445 SEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGS-MSLKTV-ELLL--QELGDFTVN 500
+ + +D+PE + L ++ Q + + RG ++LK EL+L ++LG N
Sbjct: 1074 ENSRNFNVDLPEVEDLEHIVRQMKWNED--AGRRRGQYLTLKDCQELILAGEQLGLSEAN 1131
Query: 501 MPELELLKQY--HSDAIFWIARLNDIL 525
L K H +A W A+ +++
Sbjct: 1132 -EHLAHFKDLCRHGEA--WEAKAKELM 1155
Score = 46 (21.3 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEG 1172
W ++ +LE KP + + N L EG
Sbjct: 926 WGQKLDNILEDDPKPQLKVLHNLLNEG 952
Score = 43 (20.2 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 681 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVIN 717
P + +LE L++ S+ L E+ LE++IN
Sbjct: 1374 PRDAARPKLEDLQEWQSEIPSLPFQPDEEQILERIIN 1410
Score = 40 (19.1 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 417 KVWRDSVRKCISNKCP------------AAIEIDVLYKLESEALDLKIDVPETDMLLKMI 464
K+ R V++C CP A +++ L + +SE L E +L ++I
Sbjct: 1350 KIARGKVKECDKYTCPICDWRQKIPRDAARPKLEDLQEWQSEIPSLPFQPDEEQILERII 1409
Query: 465 GQAESCR 471
QA + R
Sbjct: 1410 NQATAFR 1416
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 403 (146.9 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 96/235 (40%), Positives = 131/235 (55%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR LPDLF+ QPDLL +LVT L+PS L GVPV+ +Q G FV+TFPR+YHAGFN G
Sbjct: 442 MRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSG 501
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLC----VVAKSD--------- 107
NCAEAVN AP DWLPHG +LY Q + +SH++LL V K+D
Sbjct: 502 FNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLLRKN 561
Query: 108 -LDS-KVSPYLKRE-LLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCII 164
+D+ + + ++ +L K R+ ER R+ + S+ + + + T E CI
Sbjct: 562 TVDNLRWKAFSAKDGILAKTLKARIDMERTRREFLCNSS-LALKMHSNFDATNERECCI- 619
Query: 165 CRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVD 219
C L+LSA CRC P + CL H + LC C + L+R+ + EL L V+
Sbjct: 620 CFFDLHLSAAGCRCSPEKYSCLTHVKELCSCPWVTKYFLFRYDIDELNVLVEAVE 674
Score = 40 (19.1 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 319 DCLHKAENWSSLPGSDSEKVRLD 341
D L N SLP +D + +R D
Sbjct: 868 DSLRDTRNTISLPTNDQKTMRRD 890
Score = 39 (18.8 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 21/89 (23%), Positives = 37/89 (41%)
Query: 407 EKLSQRISSAKVW-RDSVRKCISNKCPAA-IEIDVLYKLESEALDLKIDVPETDMLLKMI 464
E + ++SS W R + +S + +EID K+ + + D+ LK+
Sbjct: 671 EAVEGKLSSVYRWARQDLGLALSTDVSGSKMEIDEEGKVHKDPTPQTTALSGKDLQLKVT 730
Query: 465 GQAESCRARCSEALRGSMSLKTVELLLQE 493
+ S+ L + L V LLL+E
Sbjct: 731 SK------EVSKELEKTSKLSHVNLLLKE 753
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 377 (137.8 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 87/232 (37%), Positives = 120/232 (51%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR LPDLF+ QPDLL LVT +PS+L + GV Y V+Q G +V+TFPR+YHAGFN G
Sbjct: 342 MRKHLPDLFEEQPDLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCG 401
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKREL 120
NCAEAVN AP DWL HG +LY + + LSH++LL A + K L
Sbjct: 402 FNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAV--KALWELSASE 459
Query: 121 LRVYTKERMWRERLWRKGIIKS-------------TPMGP-----RKCPEYVGTEEDPTC 162
+ T W+ + G + + T +G +K + + + C
Sbjct: 460 GKENTTNLRWKSFCGKNGTLTNAIQARLQMEEGRITALGRDSSSLKKMEKDFDSNCEREC 519
Query: 163 IICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
C L+LSA C+C P + CL+H + LC C + +L R+T+ EL L
Sbjct: 520 FSCFYDLHLSASGCKCSPEEYACLKHADDLCSCDVKDGFILLRYTMDELSSL 571
Score = 38 (18.4 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 941 QRCKEIVGTSVGDKNSLLGL 960
Q+C E+V V D ++ LGL
Sbjct: 727 QQCWEMVMRRVKDTSTSLGL 746
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 366 (133.9 bits), Expect = 4.9e-29, Sum P(3) = 4.9e-29
Identities = 69/179 (38%), Positives = 111/179 (62%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M++ +P+LF+ QP+LL+ L+TM++P V VP+Y LQ PG +VITFP++YHAGF+ G
Sbjct: 798 MKNLVPELFEKQPNLLYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSHG 857
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKREL 120
AEAVNFAP DW+P G + YQ+ H+++V SH++LL +A S +S +L +E
Sbjct: 858 FTIAEAVNFAPPDWIPFGSSSIERYQETHRSSVFSHDQLLYTIANRSPSSDLSVWLSKEF 917
Query: 121 LRVYTKERMWRERLWRKG---IIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 176
++ +KE R +L ++ II+ + +K + + E C +C+ +LS + C
Sbjct: 918 QKIKSKENSLRNQLLKRNPTLIIEKS----QKSTQEILNNEPLQCFVCKYDCFLSFIQC 972
Score = 60 (26.2 bits), Expect = 4.9e-29, Sum P(3) = 4.9e-29
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 185 CLEHWEHLCECKTRKL 200
CL H+E LC+C +KL
Sbjct: 1037 CLSHFEDLCDCNKKKL 1052
Score = 42 (19.8 bits), Expect = 4.9e-29, Sum P(3) = 4.9e-29
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 921 FDCPELEKVLSKVDKVENWKQR 942
F +L+K +S V+K+++ Q+
Sbjct: 1056 FSIEDLDKTISSVNKIQHQHQQ 1077
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 353 (129.3 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 84/228 (36%), Positives = 120/228 (52%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR LPDLFD QPDLL +LVT +P++L GVPVY +Q G +V+TFPR+YH+GFN G
Sbjct: 342 MRKHLPDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCG 401
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKREL 120
NCAEAVN AP DWL HG ++Y Q + LSH+++L A + S +S + +
Sbjct: 402 FNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAVKS-LSAHGEDNT 460
Query: 121 LRVYTKERMWRERLWRKGIIKSTPMGPRKCP------EYVGTEED------PTCIICRQY 168
R K ++ + K I M ++ V ++D CI C
Sbjct: 461 KRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKMDKDFDSNCERECISCFSD 520
Query: 169 LYLSAVACR-CRPAA-FVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
L+LSA C+ C + C +H +C C+ + + R+T+ EL L
Sbjct: 521 LHLSATGCKNCSSLEEYGCTKH--DICSCEGKDRFIFLRYTIDELSSL 566
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 310 (114.2 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 81/192 (42%), Positives = 104/192 (54%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
PDL Q DLL+QL TM+NP L + GV VY + Q P FVITFP+S+HAG N G N E
Sbjct: 508 PDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINE 567
Query: 66 AVNFAPADWLPHGGF--GADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRV 123
AVNFAP DWL +G G YQ K VLSH+ L+ +A + S++S EL R
Sbjct: 568 AVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLATNPA-SEISV---SEL-RP 622
Query: 124 YTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAF 183
+ E + RE R I + E + E+ C C+ + Y S VAC C+
Sbjct: 623 WVHEAVKRELGIRIMIRGRYDLKEILYRELMEDAENWQCQHCKAFSYFSQVACSCKSIT- 681
Query: 184 VCLEHWEHLCEC 195
VC H E+LC+C
Sbjct: 682 VCPLHIEYLCKC 693
Score = 43 (20.2 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 431 CPAAIEIDVLYKLESEALDLKIDVPETDMLL 461
CP IE L ++ L LK+D E LL
Sbjct: 683 CPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 301 (111.0 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 75/228 (32%), Positives = 111/228 (48%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+S + ++ QP V M++P L G+PV +Q PG +VI FP SY++ F+ G
Sbjct: 369 MKSFILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCG 428
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKREL 120
NC E NFAP DWLPHG + Q+ K +++S+++LL A+ + L ++
Sbjct: 429 FNCLEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKN 488
Query: 121 LRVYTKERMWRERLWRKG----IIKSTPMGPRKCPEY-VGTEE----DPT--------CI 163
YT+ W + G IIKS + E+ + + E D + C
Sbjct: 489 TACYTR---WNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECC 545
Query: 164 ICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
+C LYLSAV C C + CL H LC C + LYR+T+ EL
Sbjct: 546 VCLGDLYLSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDEL 593
Score = 37 (18.1 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 1246 ICRKPYDEKAMIACYQCDE 1264
+C P D K+ + Y DE
Sbjct: 574 LCACPCDRKSFLYRYTMDE 592
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 262 (97.3 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 68/170 (40%), Positives = 91/170 (53%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR S PDLF QPDLL QLVT+++PS LVE+G+P Q FVIT+P YHAGFN G
Sbjct: 404 MRDSAPDLFKRQPDLLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVYHAGFNCG 463
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL-CVVAKSDLDSKVSPYLKRE 119
N EAVNFA +WL G + Y+ K V +H ELL ++++ + VS L +
Sbjct: 464 FNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAKHDVSLDLVKR 523
Query: 120 LLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYL 169
L + + E L + KST K P +ED C C+ ++
Sbjct: 524 SLWSFERYVSRLEELLAQLKDKSTV--EYK-PSVDNNDEDDLCDSCKTHI 570
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 164 (62.8 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 53/204 (25%), Positives = 92/204 (45%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
P +P+ L + +L S+L+ NG+ V + +Q FVIT P +Y+ + G + +E
Sbjct: 565 PSFIQEKPETLIKSKILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSE 624
Query: 66 AVNFAPADWLP--HGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKV-SPYLKRELLR 122
+V FA +W+ H ++Y+ H +A S + +L +A + LD V S Y L
Sbjct: 625 SVPFATKEWIQDMHAENSFNMYKNLHISAPFSLDHIL--LANATLDKTVHSAYW----LM 678
Query: 123 VYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAA 182
K+R+ RE R K P+ P + + C C+ + YL+++ +
Sbjct: 679 TCLKDRVDRELTLRNEFRKRHPL-LTWIPTPLESSV-MACAFCKTFAYLASIEEK-NGTK 735
Query: 183 FVCLEHWEHLCECKTRKLHLLYRH 206
CL H + L +L R+
Sbjct: 736 TACLSHKDECFPNTDSDLTVLVRY 759
Score = 118 (46.6 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 42/150 (28%), Positives = 67/150 (44%)
Query: 1158 TKPTIGQIQNYLKEGLLMNISPKDH-YRQKLM----ELNRIGSQWADVAKKVVLDSGALS 1212
++PTI + + L E + P+++ QKL+ E R G + A L+
Sbjct: 1075 SRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTYEWVRRGKRLFGKAN-APLEIFNQH 1133
Query: 1213 LDKVFE-----LIAEGENLPVYLEKELKSLRARS---MLYCICRKPYDEKAMIACYQCDE 1264
L+ V + ++ EG + P ++ E + YC CR+P + MI C C E
Sbjct: 1134 LEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSDPSDFHYCFCRQP-EAGMMIECELCHE 1192
Query: 1265 WYHIDCVKL----LSAPEIYICAACKPQAE 1290
WYH C+K+ L A E +IC C + E
Sbjct: 1193 WYHAKCMKMSKKKLRADEKFICPICDYRVE 1222
Score = 94 (38.1 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 1245 CICRKPYD-EKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACKPQAEESSTPQNVD 1299
C+CR+P+ + C+ C EW+H +CV L +S Y C C + E P N
Sbjct: 1457 CLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDCCSK-EGKLYPWNTR 1515
Query: 1300 GGRTNAEFL-EPKTPSPKH--TNSRKKLRKAEPGLAQ--KMLAIANNSSVFDCSSGIDNL 1354
T + +L + +PS T + L KA A +L ++N S F S +D +
Sbjct: 1516 PRSTPSVWLSQAYSPSVLQGTTENVAFLNKAFSASANLFDVLPVSNTPSHF---SKMDYV 1572
Query: 1355 WWHNRKP 1361
+RKP
Sbjct: 1573 L-EDRKP 1578
Score = 85 (35.0 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 49/227 (21%), Positives = 97/227 (42%)
Query: 340 LDCVNELLGFDPLPCNEPGHLILQNYAEEARSL---IQEI----NAALSACSKISELELL 392
L+ E LG D + P +L+ EA ++ +QE+ N +A + + ++
Sbjct: 782 LENYKEALGSDN---SRPSLKVLKTLLNEAETICCPLQEVSLVRNLVKTAQQWLDKFAII 838
Query: 393 YSRASGLPICIVESEKLS-QRISSAKVWRDSVRKCISNKCPAAI-EIDVLYKLESEALDL 450
+ + S +V+ EK +R S+ +S + + + + I E D+L L EA
Sbjct: 839 FKKKS-----MVKKEKRKPKRGSATHSHLESPSEEVEDLNSSNINEADLLINLVEEAEQF 893
Query: 451 KIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQY 510
D PE + + + R + + S+S + +++E + PEL KQY
Sbjct: 894 TFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEEGESLQLKTPELLYFKQY 953
Query: 511 HSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDD 557
+ WI N I + + D + ++EL +++ G + + D+
Sbjct: 954 -MEKTEWIDSFNQI----SQKTD--STMEELVELIERGEKIGLTSDN 993
Score = 82 (33.9 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1034
C C + ++ + + C C + YH +C++ ++ E +ICP C Y
Sbjct: 1174 CFCRQPEAGMM--IECELCHEWYHAKCMKMSKKKLRADEKFICPICDY 1219
Score = 76 (31.8 bits), Expect = 1.6e-17, Sum P(4) = 1.6e-17
Identities = 46/208 (22%), Positives = 83/208 (39%)
Query: 322 HKAENW----SSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEIN 377
HKA+ W GSD+ + L + LL C P LQ SL++ N
Sbjct: 776 HKADTWLENYKEALGSDNSRPSLKVLKTLLNEAETICC-P----LQEV-----SLVR--N 823
Query: 378 AALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI-E 436
+A + + +++ + S + + ++ +R S+ +S + + + + I E
Sbjct: 824 LVKTAQQWLDKFAIIFKKKS----MVKKEKRKPKRGSATHSHLESPSEEVEDLNSSNINE 879
Query: 437 IDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGD 496
D+L L EA D PE + + + R + + S+S + +++E
Sbjct: 880 ADLLINLVEEAEQFTFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEEGES 939
Query: 497 FTVNMPELELLKQYHSDAIFWIARLNDI 524
+ PEL KQY + WI N I
Sbjct: 940 LQLKTPELLYFKQY-MEKTEWIDSFNQI 966
Score = 74 (31.1 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 67/346 (19%), Positives = 144/346 (41%)
Query: 648 VLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLK 707
+L + +V A +WL+N + L S + P+ L+ LK L+++++ + L+
Sbjct: 764 LLAAYSKVVERAHKADTWLENYKEALGSDNS-RPS------LKVLKTLLNEAETICCPLQ 816
Query: 708 EQTELEKVINNCERWQNHASSLLQDARCLLD---KDDIGDGLSNSLVS---KIEQLITSM 761
E + + ++ ++W + + + + + K G + L S ++E L +S
Sbjct: 817 EVSLVRNLVKTAQQWLDKFAIIFKKKSMVKKEKRKPKRGSATHSHLESPSEEVEDLNSSN 876
Query: 762 ESAANCGLSL-------GFDFHEIS-ELQNACSTLHWCKKALSFLSVSPSLEDVESLMAV 813
+ A+ ++L FDF E++ + A S + +KA + S S E+ +++
Sbjct: 877 INEADLLINLVEEAEQFTFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEE 936
Query: 814 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCK-GINFSF 872
E L + + + + +W+ + IS +L VE + G K G+
Sbjct: 937 GESLQLKTPELLYFKQYMEKTEWID-SFNQISQKTDSTMEEL--VELIERGEKIGLTSDN 993
Query: 873 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSK 932
+ L +K + W +QV + + S S + QLK + + LE++
Sbjct: 994 ENMATALLLK-EKSENWMKQVEGLLSQETL--STSKLFQLKSEANSICINRGLLEQLNEV 1050
Query: 933 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKP 978
+ K EN+ + ++ + +++ K + S + NKP
Sbjct: 1051 LQKSENFHTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKP 1096
Score = 71 (30.1 bits), Expect = 8.5e-17, Sum P(5) = 8.5e-17
Identities = 57/309 (18%), Positives = 127/309 (41%)
Query: 490 LLQELGDFTVNMPELEL-LKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEG 548
L++E FT + PE+ + ++ S IF N K++ +E I++EG
Sbjct: 886 LVEEAEQFTFDFPEMAVAFEKAESLKIF--------REKANAMKERSLSYEECLAIVEEG 937
Query: 549 ASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQVT-AEAVILQIEREKL 604
SL+++ +L + ++K + + + D+ M + + + E + L + E +
Sbjct: 938 ESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTME-ELVELIERGEKIGLTSDNENM 996
Query: 605 FIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKS 664
L + + W ++ +L + +++ + + L E NE+ KS
Sbjct: 997 ATALL-LKEKSENWMKQVEGLLSQETLSTSKLFQLKSEANSICINRGLLEQLNEV-LQKS 1054
Query: 665 WLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQN 724
+++L + A P S +E K ++++S+ L +E T +K++ W
Sbjct: 1055 ENFHTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTYEWVR 1114
Query: 725 HASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITS--MESAANCGLSLGFDFHEISELQ 782
L A L+ + N + +EQ T+ ++ ++ +G +++ I+
Sbjct: 1115 RGKRLFGKANAPLE-------IFNQHLEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSD 1167
Query: 783 NACSTLHWC 791
S H+C
Sbjct: 1168 P--SDFHYC 1174
Score = 58 (25.5 bits), Expect = 3.3e-11, Sum P(4) = 3.3e-11
Identities = 29/123 (23%), Positives = 49/123 (39%)
Query: 912 LKELGEAAAFD--CPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVH 969
+K L +AA P +L + E + EI SV D S LG L
Sbjct: 1392 MKSLAQAAISPNPMPSAHDLLPTSNPAELFTNISPEIKELSV-DSTSTLGGLN------- 1443
Query: 970 RSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYIC 1029
S ++ + + SV +C+C + + + C C + +H +C+ + + Y C
Sbjct: 1444 -SSHLVSDQNASV---ICLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYAC 1499
Query: 1030 PYC 1032
P C
Sbjct: 1500 PDC 1502
Score = 46 (21.3 bits), Expect = 8.4e-15, Sum P(4) = 8.4e-15
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 686 LLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 740
L+ L+ + D + F I ++ L++V+ E ++N S + D L +KD
Sbjct: 1232 LIELQKMVDDIPTLPFQPIEIEL---LKRVVKQAEEFKNKMQSEVCDPTQLSEKD 1283
Score = 43 (20.2 bits), Expect = 8.5e-17, Sum P(5) = 8.5e-17
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 282 TLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGI-----RDCLHKAENWSSLPGSDSE 336
TLL EAE E+ VR++V ++W + + + K E GS +
Sbjct: 803 TLLNEAETICCPLQEVSLVRNLVKT---AQQWLDKFAIIFKKKSMVKKEKRKPKRGSATH 859
Query: 337 KVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRA 396
E+ + NE LI N EEA + A K L++ +A
Sbjct: 860 SHLESPSEEVEDLNSSNINEADLLI--NLVEEAEQFTFDFPEMAVAFEKAESLKIFREKA 917
Query: 397 SGL 399
+ +
Sbjct: 918 NAM 920
Score = 41 (19.5 bits), Expect = 5.3e-14, Sum P(4) = 5.3e-14
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 638 IIRASQDIFVVLPSLDEVQNEISTAKSWL 666
++ ++ I L + V+N + TA+ WL
Sbjct: 804 LLNEAETICCPLQEVSLVRNLVKTAQQWL 832
Score = 40 (19.1 bits), Expect = 3.3e-14, Sum P(4) = 3.3e-14
Identities = 12/69 (17%), Positives = 29/69 (42%)
Query: 1158 TKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVF 1217
T T+ ++ ++ G + ++ + + L W + + L LS K+F
Sbjct: 970 TDSTMEELVELIERGEKIGLTSDNENMATALLLKEKSENWMKQVEGL-LSQETLSTSKLF 1028
Query: 1218 ELIAEGENL 1226
+L +E ++
Sbjct: 1029 QLKSEANSI 1037
Score = 40 (19.1 bits), Expect = 6.7e-14, Sum P(4) = 6.7e-14
Identities = 22/123 (17%), Positives = 52/123 (42%)
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 409
+ L P L + Y E+ + + S + EL L R + + ++E +
Sbjct: 938 ESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTMEELVELIERGEKIGLTS-DNENM 996
Query: 410 SQRI---SSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 466
+ + ++ W V +S + + L++L+SEA + I+ + L +++ +
Sbjct: 997 ATALLLKEKSENWMKQVEGLLSQE---TLSTSKLFQLKSEANSICINRGLLEQLNEVLQK 1053
Query: 467 AES 469
+E+
Sbjct: 1054 SEN 1056
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 235 (87.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 62/169 (36%), Positives = 93/169 (55%)
Query: 6 PDLFDAQPDLLFQLVTMLNP--SVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNC 63
PDLF QPDLL QLVT+++P ++G+PVY +Q+P ++ITFP+ YHAGFN G N
Sbjct: 467 PDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNF 526
Query: 64 AEAVNFAPADWLPHGGFGADL-YQQYHKAAVLSHEELLC-VVAKSDLDSKV--SPYLKR- 118
EAVNF WLP+G FGA Y+ KA V +L+ V+ K + D+ + ++++
Sbjct: 527 NEAVNFTIDFWLPYG-FGAITDYKLTQKACVFDMFDLMINVLDKYNKDTLLFNDAFVRQC 585
Query: 119 -ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICR 166
L V+ + R R + + ++T + P E D C C+
Sbjct: 586 YSSLIVFYNTELKRIRKIQAIVPRTTLLEVHTDPNDEDEEYDIFCSQCK 634
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 166 (63.5 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 61/228 (26%), Positives = 97/228 (42%)
Query: 19 LVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
L +++PS L+ENG ++ P F++ P SYH GF+ G + E+VNFA +W+ G
Sbjct: 507 LPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDG 566
Query: 79 GFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWRERLWRKG 138
+ + + S V+ L SK +P E L ++ + E +
Sbjct: 567 LLNSSI-SVLKSMRIPSSVSYEAVIISMVL-SK-NPCFSSEWLIKCFEDMIANESASKNE 623
Query: 139 IIKSTP-MGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKT 197
I+K P + K V E C C+Q +LS + C P F+CL
Sbjct: 624 IMKLVPNIQALKLESSVPLEI--RCSNCKQPCFLSFMQCH-EPKKFICLGDCVKEVSLNA 680
Query: 198 RKLHLLYR---HTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRP 242
L YR H L+ L + F+++ R LR +S+S +P
Sbjct: 681 TSWMLFYRWDVHELSNLAERFVSLIRGPEEWTNR---LRSVLSTSPKP 725
Score = 117 (46.2 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 1231 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK 1286
E L + + ++C CR P + MI C C EWYH C+K+ L E + C C
Sbjct: 1085 EGRLTIRKKKGCIFCFCRLP-ESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICD 1143
Query: 1287 PQAEE---SSTPQNVDGGRTNAEFLEPKT-P-SPKHTNSRKKLRKAEPGLAQKMLAIANN 1341
+ E S+ P+ D + + + K P PK T + +K+ Q+M A+A+N
Sbjct: 1144 YRVEIPRLSNRPKLED---LQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHN 1200
Score = 83 (34.3 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 987 CMCCESDSKELEFLI-CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGG 1045
C+ C E +I C C + YH +CL+ ++ E + CP C Y + +
Sbjct: 1096 CIFCFCRLPESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDY--RVEIPRLSN 1153
Query: 1046 SPLRFGGKRSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVA 1087
P K DL+ L + D + + + L++VVD+A
Sbjct: 1154 RP-----KLEDLQSLYK---DVKLLPFQPKETETLRKVVDLA 1187
Score = 72 (30.4 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 20/89 (22%), Positives = 37/89 (41%)
Query: 948 GTSVGDKN----SLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1003
GT++ D N S + L++ K + + + + S C+C E S F+ C+
Sbjct: 1317 GTNISDANNKNESHVSLMKNWKLGSPAFVTLVKEKNSS-----CLCGEEFSPRDSFIDCT 1371
Query: 1004 ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
C+ +H C+ + + CP C
Sbjct: 1372 ICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
Score = 69 (29.3 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 24/98 (24%), Positives = 40/98 (40%)
Query: 1245 CICRKPYDEK-AMIACYQCDEWYHIDCVKLLS--APEI--YICAACKPQA---------- 1289
C+C + + + + I C C+ +H DCV L + A + + C C Q+
Sbjct: 1355 CLCGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPICMEQSGGIYPWQLRP 1414
Query: 1290 EESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKA 1327
P ++ G E +PK S +T + K KA
Sbjct: 1415 RNGMHPDHISGFSKEVE-TDPKLGSSGYTLNNSKFDKA 1451
Score = 66 (28.3 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 77/379 (20%), Positives = 148/379 (39%)
Query: 618 WEERAADILIH--KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLK--NSELFL 673
W R +L K Q+ + ++ ++ + P +++ + A SW+ N L +
Sbjct: 711 WTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKV 770
Query: 674 ASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA 733
AS L + + S K + K + C+ +N + Q A
Sbjct: 771 ASLKRKKDKKPPLFKAHDHWNNTSNLKDSAVLFKVLQTSRSMAFTCQEIEN----MKQKA 826
Query: 734 RCLLD-KDDIGDGLSNSL-VSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWC 791
LL+ ++ + + S L + ++L+T E LGF E+ +Q W
Sbjct: 827 FDLLEFRNRLINSFSGPLDKNTCQRLLTEAEL-------LGFTIPELGIIQKYLIQFEWL 879
Query: 792 KKALSFLSVSPSLEDVESLMA--VAEGLSTRCFSSMLWNSLIHGVK--WLKRALEVISAP 847
SF + + D+E L+ V+ G+ M++ + G W + + +S
Sbjct: 880 DMFYSFETTRTTDSDLERLITYGVSAGIPEDN-DYMIFAKAMKGRAEIWENQVYDTLSKS 938
Query: 848 CKFKRCKLSDV-EEVLAGCKGINFSFPVVIGELTSAIQ-KHKLWQEQVHQFFNLKCAQQS 905
KLS + +E + C F V+G L +A + K+K+ + ++
Sbjct: 939 -NISYDKLSLLRDEAMNLCVNKEL-FSKVVGILNNAEEIKNKI------ATLCERSQEKD 990
Query: 906 WSLMLQLKELGEA--AAFDCPELEK---VLSKV-DKVENWKQRCKEIVGTSVGDKNSLLG 959
++L + E+ EA +A P L + L K+ D V W +R K + G + L
Sbjct: 991 FALRPSIDEVKEALASAEKLPILSESTVTLQKMYDVVLEWIRRGKRLFGKANAPLEILGQ 1050
Query: 960 LLQKIKQSVHRSLYIYNKP 978
L +++ SL + ++P
Sbjct: 1051 HLDYVEKRNSASLSLNDRP 1069
Score = 57 (25.1 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 540 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDT----KMPLDFIRQVTAEAV 595
+L ++ G S I D+ ++ + K + DT + D + + EA+
Sbjct: 894 DLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAM 953
Query: 596 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEV 655
L + +E LF + G+L A EE I A +CE R+ + F + PS+DEV
Sbjct: 954 NLCVNKE-LFSKVVGILNNA---EEIKNKI----ATLCE-----RSQEKDFALRPSIDEV 1000
Query: 656 QNEISTAK 663
+ +++A+
Sbjct: 1001 KEALASAE 1008
Score = 56 (24.8 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 42/210 (20%), Positives = 84/210 (40%)
Query: 439 VLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFT 498
VL+K+ + + E + + + R R + G + T + LL E
Sbjct: 801 VLFKVLQTSRSMAFTCQEIENMKQKAFDLLEFRNRLINSFSGPLDKNTCQRLLTEAELLG 860
Query: 499 VNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDL 558
+PEL ++++Y W+ D+ + + + ++ L + G S I D+
Sbjct: 861 FTIPELGIIQKYLIQ-FEWL----DMFYSFETTRTTDSDLERL---ITYGVSAGIPEDND 912
Query: 559 PLVEVELKKAHCREKALKACDT----KMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAA 614
++ + K + DT + D + + EA+ L + +E LF + G+L
Sbjct: 913 YMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAMNLCVNKE-LFSKVVGILNN 971
Query: 615 AMRWEERAADILIHKAQMCEFEDIIRASQD 644
A + + A L ++Q +F +R S D
Sbjct: 972 AEEIKNKIAT-LCERSQEKDFA--LRPSID 998
Score = 52 (23.4 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 362 LQNYAEEARSLIQ-------EINAALSACSK--ISELELLYSRASGLPICIVESEKLSQR 412
L N AE SLI+ + + LS K + L+ L A + E+ L
Sbjct: 694 LSNLAERFVSLIRGPEEWTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDF 753
Query: 413 ISSAKVWRDSVRKC--ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESC 470
+ +A W DSV +C +++ + L+K + ++ ++ +L K++ + S
Sbjct: 754 VQNANSWIDSVNECLKVASLKRKKDKKPPLFKAHDHWNNTS-NLKDSAVLFKVLQTSRSM 812
Query: 471 RARCSEALRGSMSLKTVELL 490
C E +M K +LL
Sbjct: 813 AFTCQEI--ENMKQKAFDLL 830
Score = 51 (23.0 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 729
+LE L+ L K L KE L KV++ +++ +L
Sbjct: 1156 KLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQAL 1197
Score = 50 (22.7 bits), Expect = 4.6e-14, Sum P(5) = 4.6e-14
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 484 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL--VNINGRKDQ 534
LK ++ LL + + PE L+ + +A WI +N+ L ++ +KD+
Sbjct: 727 LKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKVASLKRKKDK 779
Score = 50 (22.7 bits), Expect = 8.3e-13, Sum P(4) = 8.3e-13
Identities = 45/208 (21%), Positives = 85/208 (40%)
Query: 424 RKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS 483
R + N ++ + +L +EA L +PE ++ K + Q E + +
Sbjct: 833 RNRLINSFSGPLDKNTCQRLLTEAELLGFTIPELGIIQKYLIQFEWL-----DMFYSFET 887
Query: 484 LKTVELLLQELGDFTVN--MPE----LELLKQYHSDAIFWIARLNDILVNINGRKDQHNV 537
+T + L+ L + V+ +PE + K A W ++ D L N D+ ++
Sbjct: 888 TRTTDSDLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSL 947
Query: 538 I-DE-LN-CILKEGASLRIQVDDLPLVEVELKKAH-CREKALKACDTKMPLDFIRQVTAE 593
+ DE +N C+ KE S + + + E++ K A C K + +D +++ A
Sbjct: 948 LRDEAMNLCVNKELFSKVVGILN-NAEEIKNKIATLCERSQEKDFALRPSIDEVKEALAS 1006
Query: 594 AVILQIEREKLFIDLSGVLAAAMRWEER 621
A L I E + L + + W R
Sbjct: 1007 AEKLPILSEST-VTLQKMYDVVLEWIRR 1033
Score = 50 (22.7 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 380 LSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNK---CPAAIE 436
LS K+ +L+ LY LP E+E L + + A +R ++ N A +
Sbjct: 1151 LSNRPKLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHNPFGLTMAEVP 1210
Query: 437 IDVLYKLESEALDLKIDVPETDM 459
+ Y + E ++ + V ET++
Sbjct: 1211 LARFYLRKMEGAEILL-VDETNL 1232
Score = 45 (20.9 bits), Expect = 6.5e-09, Sum P(5) = 6.5e-09
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1212 SLDKVFELIAEGENLPVYLE 1231
S+D+V E +A E LP+ E
Sbjct: 996 SIDEVKEALASAEKLPILSE 1015
Score = 40 (19.1 bits), Expect = 6.5e-09, Sum P(5) = 6.5e-09
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 1154 LEGLTKPTIGQIQNYL 1169
L G T P +G IQ YL
Sbjct: 858 LLGFTIPELGIIQKYL 873
Score = 39 (18.8 bits), Expect = 6.2e-10, Sum P(5) = 6.2e-10
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 1146 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKD-HYRQKLMEL 1190
+RV + +L +P + +Q+ K+ L+ PK+ +K+++L
Sbjct: 1144 YRVEIPRLSN---RPKLEDLQSLYKDVKLLPFQPKETETLRKVVDL 1186
Score = 37 (18.1 bits), Expect = 9.6e-10, Sum P(5) = 9.6e-10
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 798 LSVSPSLEDVESL 810
LS P LED++SL
Sbjct: 1151 LSNRPKLEDLQSL 1163
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 130 (50.8 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 1244 YCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI--YICAAC 1285
YC+CR+ Y+ M+ C +C+EWYH+ CVK +S P+ YIC C
Sbjct: 1384 YCVCRE-YEYGTMVECDKCNEWYHVQCVKDVSNPDADKYICPTC 1426
Score = 114 (45.2 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 75
M+ P +L G+ + +QEPG +I FP+++ + +FG N +E VN A WL
Sbjct: 752 MITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWL 805
Score = 97 (39.2 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 48/199 (24%), Positives = 83/199 (41%)
Query: 987 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SESVSQFGG 1045
C+C E + + + C C + YH+QC++ +V A+ YICP C S + +QF
Sbjct: 1385 CVCREYEYGTM--VECDKCNEWYHVQCVK--DVSNPDADKYICPTCLVISMSSNYNQFLQ 1440
Query: 1046 SPLRFGGKRSDLRMLIELLSDSEFF-CRGIEAKDVLQEVVDVALECKTCLTDIVKFESCY 1104
+ G +L+ E+ + E + I ++++++D + L D +
Sbjct: 1441 DQITLG----ELK---EIYAHGELLNAQSINEMIIMKDLIDELTKHHIGLQD--QIARVV 1491
Query: 1105 LDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPT--I 1162
L D+ + L L+ GV N D L NL R K+LE K + I
Sbjct: 1492 LQSDITTKLDCLRFILRKLYGNGVL---LNDIWDHVL--NLIR-EYEKILEDAKKLSSEI 1545
Query: 1163 GQIQNYLKEGLLMNISPKD 1181
I+N + ++ KD
Sbjct: 1546 KPIENVPTTDNVEQVTQKD 1564
Score = 74 (31.1 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 73/380 (19%), Positives = 152/380 (40%)
Query: 623 ADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVA 680
+DIL+ +K + + E I + V +D Q + K ++N F+ ++ A
Sbjct: 979 SDILLKTYKGILSDGEKIYSSIVSSAVKQQDID--QEKFKKFKDQVENLRSFIDNSNAFV 1036
Query: 681 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 740
+LL ++ + + + + + T+L K++++ + S + Q L K+
Sbjct: 1037 EKCQNLLSIKHQQRIRNGNDVFREKFYSYTDLLKLVDSIPQLNFMCSEIEQ---ILEFKN 1093
Query: 741 DIG--DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKK-ALSF 797
+I D S L+SK + I + + G S G D ++ + L W + +L
Sbjct: 1094 EIENFDKASRLLLSKKNKSIQEFDDLISLGESFGLDIPSLNFIIRIRDRLKWLRTYSLIE 1153
Query: 798 LSVSP--SLEDVESLMAVA----EGLSTRCFSSMLWNSLIHGVKWLKRALE-VISAPCKF 850
V P +V S++ + +G+S + + + A + +S K+
Sbjct: 1154 KGVDPYGDKNEVFSIVDLRKFLDQGISVLSTDDLPMIKEVEAILNASNAFDHEVSKFLKY 1213
Query: 851 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQ--EQVHQFFNLKCAQQSWSL 908
+ D+ + G FS + + + ++ KL + + QF L+ A
Sbjct: 1214 NYVQELDLNRL--GDIAKRFSTEKLFISMNNYLELSKLHINIKLIEQFKELESASYPELK 1271
Query: 909 MLQLKELGEAAAFDCPELEKVLSKVDK-VEN-WKQRCKEIVGTSVGDKNSLLGLLQKIK- 965
L L F+ L K L+ V+ +++ W + C V T++ + + L K+
Sbjct: 1272 QLHNSVLESGLKFESEVLSKKLASVESWIDSSWNKLCTTKVITTLNKRIDVDHLNSKLTI 1331
Query: 966 --QSVHRSLYIYNKPHGSVS 983
+ V + L++ K S+S
Sbjct: 1332 NAKLVEKLLHLLYKSEFSLS 1351
Score = 58 (25.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 362 LQNYAEEAR-----SLIQEINAALSACSKISELELLYSRA--SGLPICIVESEKLSQRIS 414
+ NY E ++ LI++ SA EL+ L++ SGL ESE LS++++
Sbjct: 1240 MNNYLELSKLHINIKLIEQFKELESA--SYPELKQLHNSVLESGLKF---ESEVLSKKLA 1294
Query: 415 SAKVWRDSV-RKCISNKCPAAIE--IDVLYKLESEALDLKIDVPETDMLLKMIGQAE 468
S + W DS K + K + IDV + L S+ L I+ + LL ++ ++E
Sbjct: 1295 SVESWIDSSWNKLCTTKVITTLNKRIDVDH-LNSK---LTINAKLVEKLLHLLYKSE 1347
Score = 40 (19.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 164 ICRQYLYLSAVAC-RC 178
+CR+Y Y + V C +C
Sbjct: 1386 VCREYEYGTMVECDKC 1401
Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 695 LVSQSKFLKISLKEQTELEKVI 716
++S KF++ +EQ E + I
Sbjct: 913 IISMQKFIQCQQQEQEEQQNSI 934
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 199 (75.1 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 2 RSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGL 61
R PD+ L V +++P+VL ENG+P + QE G F++TFP YHAGFN G
Sbjct: 225 RELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGF 284
Query: 62 NCAEAVNFAPADWLPHG 78
NCAEA+NFA W+ +G
Sbjct: 285 NCAEAINFATPRWIDYG 301
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 193 (73.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 243 VALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 43 (20.2 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 266 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLI 308
CS + FS DA+ +L+ LW + AV D ++
Sbjct: 307 CSCGEARVSFSMDAFVRILQPERYELWKRGQDQAVVDHTETMV 349
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 194 (73.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 246 VALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 304
Score = 44 (20.5 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1302 RTNAEFLEPKTPSPKHTNSRKKL---RKAEPGLAQ 1333
R + +EP+ P+ + +++K++ R+A GL Q
Sbjct: 342 RAVVDHMEPRVPASQELSTQKEVQLPRRAALGLRQ 376
Score = 40 (19.1 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 266 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRD 302
CS + FS DA+ +L+ LW + AV D
Sbjct: 310 CSCGEARVTFSMDAFVRILQPERYDLWKRGQDRAVVD 346
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 193 (73.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 243 VALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 266 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRD 302
CS + FS DA+ +L+ +W + AV D
Sbjct: 307 CSCGEARVSFSMDAFVRILQPERYEMWKRGQDQAVVD 343
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 172 (65.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 16 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 75
L + T+++P V V+ G+P ++Q PG FV+TFP +YH+GF+ G N EA N A +WL
Sbjct: 299 LGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWL 358
Query: 76 PHGGFGADLYQQYHKAAVLSHEELLC--VVAK-SDLDSKVSPYLKRELLRVYTKERMWRE 132
A + ++SH +LL V+A S + + ++P K R+ K R E
Sbjct: 359 RMAKDAAIRRAAINYPPMVSHLQLLYDFVLALGSRVPTSINP--KPRSSRLKDKARSEGE 416
Query: 133 RLWRKGIIKS 142
RL +K +++
Sbjct: 417 RLTKKLFVQN 426
Score = 64 (27.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 693 KDLVSQSKFLKIS--LKEQTEL-EKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNS 749
+DL S S + +S LK+ + EK + CER +NH +S +D + L D +++
Sbjct: 478 EDLSSDSVVVDLSNGLKDTVSVKEKFTSLCERSRNHLASTEKDTQETLS--DAERRKNDA 535
Query: 750 LVSKIEQLITSMESAANCGLSLGFDFHEISELQNACS 786
V+ +Q + S CG+ L FD I + + A +
Sbjct: 536 AVALSDQRLFS---CVTCGV-LSFDCVAIVQPKEAAA 568
Score = 41 (19.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 367 EEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC 426
++ARS + + L + I ELL S G P+ ++ S IS R
Sbjct: 409 DKARSEGERLTKKLFVQNIIHNNELLSSLGKGSPVALLPQS--SSDISVCSDLRIGSHLI 466
Query: 427 ISNKCPAAIEIDVLYKLESEALDLKIDVPET 457
+ + P ++ + L +S +DL + +T
Sbjct: 467 TNQENPIQLKCEDLSS-DSVVVDLSNGLKDT 496
Score = 38 (18.4 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 233 RRQISSSNRPTTLTKKVKGVRVTMSQLVEQWLS 265
+RQ S+ + TK V+ R T + ++++ S
Sbjct: 1135 KRQTRSTAKRIAKTKTVQSSRDTKGRFLQEFAS 1167
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 183 (69.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 49 (22.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 552 RIQVDDLPLVEVELKKAHCREKALK 576
+I VD +PL ++LK CR + K
Sbjct: 793 QIDVDRIPLQRLKLKCIFCRHRVKK 817
Score = 41 (19.5 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 546 KEGASLRIQVDDLPLVEVELKKAHCREKALKA 577
KE RIQVD L + +L C ++ A
Sbjct: 430 KEALDTRIQVDQSLLNDTKLSGKGCISSSVTA 461
Score = 38 (18.4 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 649 LPSLDEVQNEISTAKSWLK 667
LP + + E+ +SW K
Sbjct: 595 LPEVLSIDEEVEETESWAK 613
Score = 37 (18.1 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1240 RSMLYCI-CRKPYDEKAMIACYQCDEW-----YHIDC 1270
R L CI CR +K AC QC +H+ C
Sbjct: 803 RLKLKCIFCRHRV-KKVSGACIQCSYGRCPASFHVTC 838
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 193 (73.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/127 (37%), Positives = 72/127 (56%)
Query: 16 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 75
L + T+++P ++V +G+P ++Q PG FV+TFPRSYH GF+ G NC EA NF WL
Sbjct: 358 LGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWL 417
Query: 76 PHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMW-RERL 134
A + +LSH++LL ++ S + S+V P R LL R+ R+R
Sbjct: 418 NVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFV-SRV-P---RSLLPGGRSSRLRDRQRE 472
Query: 135 WRKGIIK 141
R+ ++K
Sbjct: 473 EREFLVK 479
Score = 41 (19.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 1302 RTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIAN 1340
+T++ ++ P+ +HT ++L ++ GL K L I +
Sbjct: 640 KTSSRYIRPRIFCLEHTIELQRLLQSRGGL--KFLVICH 676
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 183 (69.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 48 (22.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 552 RIQVDDLPLVEVELKKAHCREK 573
+I VD +PL ++LK CR++
Sbjct: 792 QIDVDRIPLQRLKLKCIFCRQR 813
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 652 LDEVQNEISTAKSWLKNSELFLASAFAVAPASCS-LLRLES--LKDLVSQSKFLKISLKE 708
+DE+Q E TA + S L AS + P S + ES LK L +S + SL E
Sbjct: 459 IDEIQPENDTANAVTSPSTLKKASD--LIPFSHGHITGKESRLLKILQLESPKIPSSLAE 516
Query: 709 QTE-LEKVINNCERWQNHASSL 729
L + N E + HAS+L
Sbjct: 517 SNRVLTEGEENDE--EGHASNL 536
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 162 CIICRQYLYLSAVAC------RCRPAAF 183
CI CRQ + + AC RC PA+F
Sbjct: 807 CIFCRQRVKRVSGACIQCSYGRC-PASF 833
Score = 38 (18.4 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 649 LPSLDEVQNEISTAKSWLK 667
LP + + E+ +SW K
Sbjct: 594 LPEVLSIDEEVEETESWAK 612
Score = 37 (18.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 1312 TPSPKH-TNSRKKLRKAEPGL 1331
TP K RKKLRKA L
Sbjct: 353 TPEVKTWLQRRKKLRKAPKSL 373
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 546 KEGASLRIQVDDLPLVEVELKKAHC 570
KE + RIQVD + +L C
Sbjct: 429 KEASDTRIQVDQSLTNDTKLSGKSC 453
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 176 (67.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGG 79
+T+++PS+L + +P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 323 MTLISPSILKKYSIPFDRITQEEGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGK 382
Query: 80 FGA 82
A
Sbjct: 383 MAA 385
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 183 (69.5 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 63 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 121
Score = 40 (19.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 649 LPSLDEVQNEISTAKSWLK 667
LP + ++ E+ +SW K
Sbjct: 416 LPEVLSIEEEVEETESWAK 434
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 183 (69.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 46 (21.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 13/52 (25%), Positives = 19/52 (36%)
Query: 1282 CAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQ 1333
CA P + G T+ E PK P PK S + ++ L +
Sbjct: 477 CATVPPSNPRADYASMSSGHVTSEESDPPKLPWPKSPESYSSVAESTSALTE 528
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1262 CDEWYHIDCVKLLSA--PEIYICAACK 1286
C + H C+ ++ +IY+CA CK
Sbjct: 723 CCQRLHEKCMCFVNEFICKIYVCAPCK 749
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 186 (70.5 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PS+L + G+P V QE G F+ITFP SYHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG 300
Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 991 ESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
E D + + C C+ C H C + D+ E ++C C
Sbjct: 724 EEDGTSV-LITCRNCQVCVHASCYGVSP-DKA-TEDWMCSRC 762
Score = 40 (19.1 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 546 KEGASLRIQVDDLPLVEVELKK 567
++G+ L ++ DD+ +E EL K
Sbjct: 988 EDGSQLMVKRDDVYTLEEELPK 1009
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 553 IQVDDLPLVEVELKKAHC--REKALKAC 578
+ V +PL LK C R K + C
Sbjct: 812 VDVSKIPLQRFRLKCIFCKKRRKRIAGC 839
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1263 DEWYHIDC-VKLLSAPEIYI 1281
D+W H+ C V +L A + I
Sbjct: 787 DKWVHVMCAVGVLEAKFVNI 806
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 183 (69.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 63 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 121
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 649 LPSLDEVQNEISTAKSWLK 667
LP + ++ E+ +SW K
Sbjct: 342 LPEVLSIEEEVEETESWAK 360
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 552 RIQVDDLPLVEVELKKAHCREK 573
+I V +PL ++LK CR +
Sbjct: 540 QIDVGRIPLQRLKLKCIFCRHR 561
Score = 37 (18.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 918 AAAFDCPELEKVLSKVDKVENW 939
A + + PE+ + +V++ E+W
Sbjct: 337 AESNELPEVLSIEEEVEETESW 358
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 183 (69.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 649 LPSLDEVQNEISTAKSWLK 667
LP + ++ E+ +SW K
Sbjct: 594 LPEVPSIEEEVEETESWAK 612
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 552 RIQVDDLPLVEVELKKAHCREKALK 576
+I V +PL ++LK CR + K
Sbjct: 792 QIDVGRIPLQRLKLKCIFCRHRVKK 816
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 655 VQNEISTAKSW 665
++ E TAKSW
Sbjct: 558 IEGETKTAKSW 568
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 922 DCPELEKVLSKVDKVENW 939
+ PE+ + +V++ E+W
Sbjct: 593 ELPEVPSIEEEVEETESW 610
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1240 RSMLYCI-CRKPYDEKAMIACYQCDEW-----YHIDC 1270
R L CI CR +K AC QC +H+ C
Sbjct: 802 RLKLKCIFCRHRV-KKVSGACIQCSYGRCPASFHVTC 837
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 180 (68.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PS+L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 44 (20.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 561 VEVELKKAHCREKALKACDTKMPLDFIRQVTA-EAVILQIEREKLFIDLSGVLAA-AMRW 618
+++E+KK+ R L T+ PL ++Q T+ + E+ D + + +++W
Sbjct: 608 MKMEIKKS--RRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDPEALKSLLSLQW 665
Query: 619 EERA 622
+ RA
Sbjct: 666 KNRA 669
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 183 (69.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 244 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 649 LPSLDEVQNEISTAKSWLK 667
LP + ++ E+ +SW K
Sbjct: 597 LPEVLSIEEEVEETESWAK 615
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 552 RIQVDDLPLVEVELKKAHCREK 573
+I V +PL ++LK CR +
Sbjct: 795 QIDVGRIPLQRLKLKCIFCRHR 816
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 182 (69.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PS+L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 188 MTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWIDYG 246
Score = 39 (18.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 553 IQVDDLPLVEVELKKAHCREKALKACD 579
++ D L+ + + AH K K C+
Sbjct: 791 VRPTDCLLITITITHAHTPNKRTKTCE 817
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 169 (64.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 60/210 (28%), Positives = 97/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL GV V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 978 MISPEVLCREGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1037
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1038 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1097
Query: 139 IIKST-----------PMGPRKCPEYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ S P G +K +++ E + C +C+ YLS V F CL
Sbjct: 1098 LHSSARYGSHDGGSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1156
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1157 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1186
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 168 (64.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 59/210 (28%), Positives = 97/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 996 MISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1055
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1056 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1115
Query: 139 IIKST-----------PMGPRKCPEYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ S P G +K +++ E + C +C+ YLS V F CL
Sbjct: 1116 LHSSARYGSHDGSSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1174
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1175 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1204
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 123 (48.4 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 1234 LKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL--LSAPE----IYICAACKP 1287
L+S R YC CR+ + AM+ C C EWYH+DC+ L P+ +++C+ C P
Sbjct: 1230 LESCSKRQTKYCFCRRVEEGTAMVECEICKEWYHVDCISNGELVPPDDPNVLFVCSICTP 1289
Score = 107 (42.7 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 11 AQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 70
+Q D +F+ P+ ++ NG+ +Y QE G+++ FP+++ G ++ FA
Sbjct: 626 SQSDFIFE------PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFA 679
Query: 71 PADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLK---RELLRVYTKE 127
P+ WL F ++ + K L ++ ++ + L+S +P L+ R+L+ Y E
Sbjct: 680 PSSWLR---FSSEAAKWTSKMGFLPGLDVNQLLINALLNSN-NPVLRKKCRDLISNYVVE 735
Score = 44 (20.5 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 693 KDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVS 752
+D+ + K+ LK Q ++KV ++ SL LLD ++ + +S S
Sbjct: 1059 EDIDKLGEVRKLILKYQDMMQKVRVFLKKDPPSKISLSDLEDVLLDIEEYRLPIQSSFFS 1118
Query: 753 KIEQLITSMESA 764
+++ +I +E+A
Sbjct: 1119 ELDYVIREIENA 1130
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 167 (63.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 61/210 (29%), Positives = 97/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G N +E V+FA W G
Sbjct: 982 MISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFET 1041
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ H A S E+LL +A+++ + P L LL + E R L+ G
Sbjct: 1042 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAG 1101
Query: 139 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ S G +K P +++ E + C IC+ YLS V F CL
Sbjct: 1102 LHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1160
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1161 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1190
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 160 (61.4 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+TM++P VL ++ +P + QE G +ITFP YHAGFN G N AE+ NFA W+ +G
Sbjct: 249 MTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYG 307
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 165 (63.1 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 60/210 (28%), Positives = 98/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 984 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1043
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1044 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1103
Query: 139 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ S G +K P +++ E + C IC+ YLS V F CL
Sbjct: 1104 LHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1162
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1163 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1192
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 173 (66.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L ++ VPV + QE G +ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 240 MTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYG 298
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 477 ALRGSMSLKTVELLLQELGDFTVNMPELELLKQ 509
+L+ +LKT + LL+ + D T + E E K+
Sbjct: 430 SLQSPANLKTKQELLEYIDDGTEDDDEEEDFKR 462
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 164 (62.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/210 (28%), Positives = 98/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 987 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1046
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1047 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1106
Query: 139 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ S G +K P +++ E + C +C+ YLS V F CL
Sbjct: 1107 LHSSARYGSHDSNGAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1165
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1166 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1195
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 164 (62.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/210 (28%), Positives = 98/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 997 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1056
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ H A S E+LL +A+++ + P L LL + E R +L+ G
Sbjct: 1057 AKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAG 1116
Query: 139 IIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ S G +K P +++ E + C +C+ YLS V F CL
Sbjct: 1117 LHSSARYGSHDSNGAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVF-CL 1175
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L L+YR+ ++ L
Sbjct: 1176 ECALRHVEKQKSCRGLKLMYRYDEEQIISL 1205
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 174 (66.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+ P+ L + + +P +L ENG+ ++ G F+IT+P YHAGFN+G
Sbjct: 270 MQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYG 329
Query: 61 LNCAEAVNFAPADWLPHG 78
N AE+VNFA +WLP G
Sbjct: 330 YNLAESVNFALEEWLPIG 347
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1288 QAEESSTPQNVDGGRTN-----AEFLEPKTPSPK---HTNSRKKLRKAEP 1329
Q STP V T+ ++ + KTP P+ H + + L+K P
Sbjct: 604 QQHSFSTPSTVSNLSTSVLGPLSDTNDIKTPHPERPNHKTANRILKKESP 653
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 175 (66.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 40 (19.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1030 PYCQYFESES---VSQFG-GSPLRFGGK-RSDLRMLI 1061
PYCQ ++E ++ G G P K R R LI
Sbjct: 692 PYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLI 728
Score = 37 (18.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 91 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERM 129
A + L V+ + +D P + +L VY ++RM
Sbjct: 821 AIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRM 859
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 175 (66.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 40 (19.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1030 PYCQYFESES---VSQFG-GSPLRFGGK-RSDLRMLI 1061
PYCQ ++E ++ G G P K R R LI
Sbjct: 726 PYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLI 762
Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 91 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERM 129
A + L V+ + +D P + +L VY ++RM
Sbjct: 855 AIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRM 893
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 181 (68.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
P+ F + L +T+++PSVL + +P + QE G F+ITFP YHAGFN G NCAE
Sbjct: 230 PNSFKSCEAFLRHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAE 289
Query: 66 AVNFAPADWLPHG 78
+ NFA W+ +G
Sbjct: 290 STNFASIRWIDYG 302
Score = 47 (21.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 415 SAKVWRDSVRKCISNKCPAAIEIDVLYKLES-EALDLKIDVPETD 458
+AK WR +RK + P+A++ E E + D PET+
Sbjct: 1002 TAKSWRHPLRKPTARAVPSAVKQQAASDDEVIEECASEEDEPETE 1046
Score = 43 (20.2 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 651 SLDEVQNEISTA---KSWLKNSELFLASAFAVAPASCS--LLRLES--LKDLVSQSKFLK 703
SLD ST +SWL+ S AP SCS L ++S +K +S+
Sbjct: 342 SLDHTLPTPSTTPELQSWLQRRRRKTPSTSLHAPRSCSKRLKTVDSAPVKGSGRRSRSAA 401
Query: 704 ISLKEQTELEK 714
++ K + E E+
Sbjct: 402 LTAKNKEEEEE 412
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 1243 LYCICRKPYDEKAMI--ACYQCDEWYHIDCVKLLSAP 1277
+YC R A I +C +C +H+ C P
Sbjct: 1241 IYCRNRIKRLSGACIQCSCGRCPTSFHVTCAHAAGVP 1277
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 987 CMCCESDSKELEFLI----CSACKDCYHLQC 1013
C+ C + K L C C +H+ C
Sbjct: 1240 CIYCRNRIKRLSGACIQCSCGRCPTSFHVTC 1270
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 411 QRISSAKVWRDSVRKCISNKCP 432
++ S V D VR C CP
Sbjct: 678 EKSHSPPVITDEVRGCSERVCP 699
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 174 (66.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1263 DEWYHIDC-VKLLSA 1276
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 183 (69.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PS+L + G+P V QE G F++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 245 MTLISPSILRKYGIPFEKVTQEAGQFIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYG 303
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 1286 KPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKA 1327
K +AE + ++ + T+ + + SPK +K+LR +
Sbjct: 416 KAEAEVEKSVRDEEPSSTSEQI---SSSSPKQNTGQKRLRSS 454
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 630 AQMCEF-EDIIRASQDIFV 647
A +C +D+++ S D+FV
Sbjct: 306 ATLCSCRKDMVKISMDVFV 324
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 639 IRASQDIFVVLPSLDEVQNEIS 660
+ + Q+ ++ +D+VQ+E S
Sbjct: 1053 VSSEQETSIISAQVDDVQSEYS 1074
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 175 (66.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 39 (18.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 91 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWR 131
A + L V+ ++ +D P + +L +Y ++RM R
Sbjct: 809 AIAVPEVRFLNVIERNPVDVSAIPEQRWKLKCIYCRKRMKR 849
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 181 (68.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PS+L + G+P + QE G F++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 239 MTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYG 297
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1283 AACKPQAEESSTPQNVDGGRTNAEF-LEPKTPSP 1315
A CKPQ P+ D + + P TP+P
Sbjct: 534 ALCKPQTPSPEKPRE-DLHIPDISLDVRPNTPTP 566
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 629 KAQMCEF-EDIIRASQDIFV 647
+A +C +D+++ S D+FV
Sbjct: 299 QAILCSCRKDMVKISMDVFV 318
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 181 (68.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++PS+L + G+P + QE G F++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 239 MTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYG 297
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1283 AACKPQAEESSTPQNVDGGRTNAEF-LEPKTPSP 1315
A CKPQ P+ D + + P TP+P
Sbjct: 534 ALCKPQTPSPEKPRE-DLHIPDISLDVRPNTPTP 566
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 629 KAQMCEF-EDIIRASQDIFV 647
+A +C +D+++ S D+FV
Sbjct: 299 QAILCSCRKDMVKISMDVFV 318
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 174 (66.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1263 DEWYHIDC-VKLLSA 1276
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA 733
RL D+ F + +K++ + ++VIN+ R +++ S L A
Sbjct: 1017 RLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYR-EDYIESALYRA 1061
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1029 CPYCQYFESESVSQFGGSPLRFGGKRSDL 1057
C C F++ +FGG G SDL
Sbjct: 668 CAVCMIFQTYHQVEFGGFNQNCGNA-SDL 695
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 158 (60.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 960 MISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKT 1019
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ A S E+LL +A ++ + P L LL + E R +L+ G
Sbjct: 1020 AKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDTELRQRRQLYEAG 1079
Query: 139 I----------IKSTPMGPRKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ ST M +K P +++ E + C IC+ YLS V F CL
Sbjct: 1080 LHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1138
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L ++YR+ ++ L
Sbjct: 1139 ECALRHVEKQKSCRGLKMMYRYDEEQIISL 1168
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 158 (60.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W G
Sbjct: 973 MISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKT 1032
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERLWRKG 138
A ++ A S E+LL +A ++ + P L LL + E R +L+ G
Sbjct: 1033 AKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDTELRQRRQLYEAG 1092
Query: 139 I----------IKSTPMGPRKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAAFVCL 186
+ ST M +K P +++ E + C IC+ YLS V F CL
Sbjct: 1093 LHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVF-CL 1151
Query: 187 E-HWEHLCECKT-RKLHLLYRHTLAELYDL 214
E H+ + K+ R L ++YR+ ++ L
Sbjct: 1152 ECALRHVEKQKSCRGLKMMYRYDEEQIISL 1181
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 161 (61.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 53/206 (25%), Positives = 96/206 (46%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M+ P +L + GV + + Q+PG F++ FPR+Y + G +E+V FA WL
Sbjct: 2134 MVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLD---LA 2190
Query: 82 ADLYQQYHKA---AVLSHEELLCVVAKSD-LDSKVSPYLKRELLRVYTKERMWRERLWRK 137
D ++ H++ A+ S E+LL + ++S+ + L V KE RE+L
Sbjct: 2191 KDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAA 2250
Query: 138 GIIKSTPMGPRKCPEYVGTEEDP------TCIICRQYLYLSAVACRCRPAAFVCLEH-WE 190
G+ + + K + ++ P C +CR LY+S V R CL+H +
Sbjct: 2251 GVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQHALK 2308
Query: 191 HLCE--CKTRKLHLLYRHTLAELYDL 214
+L + ++ L+Y + + ++ L
Sbjct: 2309 NLNNGNIQAKQCKLIYAYNVDDIQQL 2334
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 175 (66.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1240 RSMLYCI-CRKPYDEKAMIACYQCD-EW----YHIDC 1270
R L C+ CRK +K AC QC E +H+ C
Sbjct: 867 RWKLKCVYCRKRM-KKVSGACIQCSCEHCSTSFHVTC 902
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1256 MIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQA 1289
+IAC +C H C + PE+ + C+ C A
Sbjct: 777 LIACAKCCLQVHASCYGI--RPELVNEGWTCSRCTAHA 812
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 636 EDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL 695
+D+++ S D+FV + L + E+ W + +L + S L S
Sbjct: 311 KDMVKISMDVFVRI--LQPERYEL-----WKQGKDLTVLDHTRPTALSSPELSTWSASRA 363
Query: 696 VSQSKFLK--ISLKEQTELEK 714
++K L+ ISLKE +K
Sbjct: 364 SLKAKLLRRQISLKENRHWKK 384
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 21/85 (24%), Positives = 30/85 (35%)
Query: 1231 EKELKSLRARSMLYCICRK-PYDEKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQA 1289
E E K MLY + R P K ++C Q E + A P
Sbjct: 550 EPEAKPRPVIPMLYVVPRPGPTGNKGRVSCQQASEHF----------------AQKGPTW 593
Query: 1290 EESSTPQNVDGGRTNAEFLEPKTPS 1314
+E +TP + G + E + PS
Sbjct: 594 KEQATPMELTGPEEESGASEGQNPS 618
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 151 (58.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 22 MLNPSVLVEN-GVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+++PS+L G+ V ++ G FVIT+P YH+G+N G NCAE+VNFA WL +G
Sbjct: 445 LVSPSLLKSQYGITVNKMVHYEGEFVITYPYGYHSGYNLGYNCAESVNFATEKWLDYG 502
Score = 58 (25.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 523 DILVNINGRKDQHN---VIDELNCILKEGASLRI--QVDDLPLVEVELKKAHCRE 572
D+L +G+ H + E IL++G+ + +D +P + LK +CRE
Sbjct: 604 DLLPTEDGKSHAHRRCALYTEETSILRDGSGKEVVCDIDKIPKARMGLKCLYCRE 658
Score = 46 (21.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 1297 NVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGL--AQKMLA 1337
++DG ++ L P P+ T++R + RK + + A++M A
Sbjct: 541 DLDGYEAASDLLTPPRSVPEKTSNRGRKRKHDGDMNKAKRMRA 583
Score = 41 (19.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 1000 LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFG 1044
L C C + + L PTE ++HA C Y E S+ + G
Sbjct: 591 LPCLLCPNDLDYEDLLPTEDGKSHAHRR-CAL--YTEETSILRDG 632
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 175 (66.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 243 MTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1240 RSMLYCI-CRKPYDEKAMIACYQCD-EW----YHIDC 1270
R L C+ CRK +K AC QC E +H+ C
Sbjct: 884 RWKLKCVYCRKRM-KKVSGACIQCSCEHCSTSFHVTC 919
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1256 MIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQA 1289
+IAC +C H C + PE+ + C+ C A
Sbjct: 794 LIACAKCCLQVHASCYGI--RPELVNEGWTCSRCTAHA 829
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 636 EDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL 695
+D+++ S D+FV + L + E+ W + +L + S L S
Sbjct: 311 KDMVKISMDVFVRI--LQPERYEL-----WKQGKDLTVLDHTRPTALSSPELSTWSASRA 363
Query: 696 VSQSKFLK--ISLKEQTELEK 714
++K L+ ISLKE K
Sbjct: 364 SLKAKLLRRQISLKENRHWRK 384
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 174 (66.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1263 DEWYHIDC-VKLLSA 1276
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1029 CPYCQYFESESVSQFGGSPLRFGGKRSDL 1057
C C F++ +FGG G SDL
Sbjct: 668 CAVCMIFQTYHQVEFGGFNQNCGNA-SDL 695
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 174 (66.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 151 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 209
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1263 DEWYHIDC-VKLLSA 1276
D W H+ C V +L A
Sbjct: 698 DRWVHVSCAVAILEA 712
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1029 CPYCQYFESESVSQFGG 1045
C C F++ +FGG
Sbjct: 575 CAVCMIFQTYHQVEFGG 591
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 153 (58.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 58/214 (27%), Positives = 97/214 (45%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL G+ V+ +Q+ G FV+ FP ++ + G + +E V+FA W+ G
Sbjct: 1054 MISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEA 1113
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLD-------SKVSPYLKRELLRVYTKERMWRERL 134
A + A S E+LL +A ++ S +S LK +L + K+R + L
Sbjct: 1114 AKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLLK-DLRNIEMKQR---QEL 1169
Query: 135 WRKGIIKS----------TPMGPRKCP-EYVGTEE-DPTCIICRQYLYLSAVACRCRPAA 182
+ G++ S +P RK P +++ E + C +C+ YLS V
Sbjct: 1170 YEAGLLSSARYCTHDHNQSPADTRKKPRKWLALESSERRCQMCQHLCYLSMVVQENENVV 1229
Query: 183 FVCLEHWEHLCEC--KTRKLHLLYRHTLAELYDL 214
F CLE H E R L ++YR+ ++ L
Sbjct: 1230 F-CLECALHYVEKHKNCRGLKMMYRYDEEQINSL 1262
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 174 (66.3 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1263 DEWYHIDC-VKLLSA 1276
D W H+ C V +L A
Sbjct: 793 DRWVHVSCAVAILEA 807
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1029 CPYCQYFESESVSQFGG 1045
C C F++ +FGG
Sbjct: 670 CAVCMIFQTYHQVEFGG 686
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 160 (61.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
++ P +L + G+P +++Q P F+ITFPR YH GFN G N AE+ NFA W+ +G
Sbjct: 324 LVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRWIDYG 380
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 1018 EVDRNHA---EAYICPYCQYFE 1036
E + NHA E C CQYF+
Sbjct: 523 EREFNHARRAEWPHCAVCQYFQ 544
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 145 (56.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 62/242 (25%), Positives = 102/242 (42%)
Query: 22 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 81
M++P VL GV VY +Q G F++ FP ++ A G + +E ++FA W+ G
Sbjct: 921 MISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQWMKLGYEA 980
Query: 82 ADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLR-VYTKERMWRERLWRKGII 140
A ++ S E+LL + + D+K L R + E R L+ G+
Sbjct: 981 AKDLKRRRIEEPFSTEKLLYQITTCERDNKQLMTAVSSLFRDLRDAEIRQRRELFEAGLR 1040
Query: 141 KSTPMG-----P---RKCPEYVGTEE--DPTCIICRQYLYLSAVACRCRPAAFVCLE-HW 189
S G P RK TE+ D C +C+ YLS V F CLE
Sbjct: 1041 LSARYGTNCESPTERRKQQRSRFTEDTADRRCQVCQHLCYLSMVVHESDNVVF-CLECAL 1099
Query: 190 EHLCECKT-RKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRPTTLTKK 248
++ + ++ R L +++R++ +L L V+R +R + S P + +
Sbjct: 1100 RYIQKRRSPRGLKMMFRYSEEQLNSL---VNRVCGRTLDKAGVKQRSVGPSKTPAKRSPR 1156
Query: 249 VK 250
K
Sbjct: 1157 NK 1158
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 174 (66.3 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 242 MTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1263 DEWYHIDC-VKLLSA 1276
D W H+ C V +L A
Sbjct: 793 DRWVHVSCAVAILEA 807
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1029 CPYCQYFESESVSQFGG 1045
C C F++ +FGG
Sbjct: 670 CAVCMIFQTYHQVEFGG 686
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 792 KKALSFLSVSPSLEDVESLMAVAEGLSTR 820
KK+ S L S S + + S +E LS R
Sbjct: 508 KKSSSSLGSSSSRDSISSDSETSEPLSCR 536
>UNIPROTKB|J3QQQ8 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
Ensembl:ENST00000581258 Uniprot:J3QQQ8
Length = 420
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 1222 EGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAP 1277
E + + VY+ + K + S LYCICR PYDE I C +C WYH CV +L S
Sbjct: 229 EAKKMDVYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEA 288
Query: 1278 EI---YICAACKPQAEESST 1294
E+ Y+C C+ E++ T
Sbjct: 289 ELIDEYVCPQCQ-STEDAMT 307
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQA 1289
K + + LYCIC+ PYDE K I C C WYH +CV K ++YIC CK +A
Sbjct: 186 KETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCK-RA 244
Query: 1290 EESSTPQ 1296
+E S+ +
Sbjct: 245 QEGSSEE 251
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 150 (57.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 7 DLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEA 66
D F + L M++P+ L ++G+ V + G F+IT+P YHAGFN+ N AE+
Sbjct: 263 DEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAES 322
Query: 67 VNFAPADWLPHG 78
VNFA DW G
Sbjct: 323 VNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 555 VDDLPLVEVELKKAHCREKALKAC 578
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 150 (57.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 7 DLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEA 66
D F + L M++P+ L ++G+ V + G F+IT+P YHAGFN+ N AE+
Sbjct: 263 DEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAES 322
Query: 67 VNFAPADWLPHG 78
VNFA DW G
Sbjct: 323 VNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 555 VDDLPLVEVELKKAHCREKALKAC 578
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 150 (57.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 7 DLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEA 66
D F + L M++P+ L ++G+ V + G F+IT+P YHAGFN+ N AE+
Sbjct: 263 DEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAES 322
Query: 67 VNFAPADWLPHG 78
VNFA DW G
Sbjct: 323 VNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 555 VDDLPLVEVELKKAHCREKALKAC 578
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 150 (57.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 7 DLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEA 66
D F + L M++P+ L ++G+ V + G F+IT+P YHAGFN+ N AE+
Sbjct: 263 DEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAES 322
Query: 67 VNFAPADWLPHG 78
VNFA DW G
Sbjct: 323 VNFALDDWFEFG 334
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 555 VDDLPLVEVELKKAHCREKALKAC 578
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>DICTYBASE|DDB_G0270880 [details] [associations]
symbol:gflC "PHD zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
dictyBase:DDB_G0270880 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG243978 RefSeq:XP_001134472.1
ProteinModelPortal:Q1ZXQ2 EnsemblProtists:DDB0231781 GeneID:8616983
KEGG:ddi:DDB_G0270880 InParanoid:Q1ZXQ2 OMA:HECEDEA Uniprot:Q1ZXQ2
Length = 1720
Score = 142 (55.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 1240 RSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLS--APEI--YICAACKPQAEE 1291
+ LYC+C+K YD+ K MIAC +CDEWYH DCV + A I Y+CA C + E+
Sbjct: 1125 KDRLYCVCQKKYDKTKFMIACDRCDEWYHGDCVYISEKDAKRIKSYVCANCIKKKEK 1181
>UNIPROTKB|E9PE19 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
IPI:IPI00384109 PRIDE:E9PE19 Ensembl:ENST00000342579
UCSC:uc002jgh.3 ArrayExpress:E9PE19 Bgee:E9PE19 Uniprot:E9PE19
Length = 650
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 1222 EGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAP 1277
E + + VY+ + K + S LYCICR PYDE I C +C WYH CV +L S
Sbjct: 449 EAKKMDVYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEA 508
Query: 1278 EI---YICAACKPQAEESST 1294
E+ Y+C C+ E++ T
Sbjct: 509 ELIDEYVCPQCQ-STEDAMT 527
Score = 135 (52.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQA 1289
K + + LYCIC+ PYDE K I C C WYH +CV K ++YIC CK +A
Sbjct: 406 KETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCK-RA 464
Query: 1290 EESSTPQ 1296
+E S+ +
Sbjct: 465 QEGSSEE 471
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 129 (50.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2530 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2588
Query: 1290 EESST 1294
E++ T
Sbjct: 2589 EDAMT 2593
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2578 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2636
Query: 1290 EESST 1294
E++ T
Sbjct: 2637 EDAMT 2641
Score = 67 (28.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 254 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 295
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2656 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2714
Query: 1290 EESST 1294
E++ T
Sbjct: 2715 EDAMT 2719
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2667 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2725
Query: 1290 EESST 1294
E++ T
Sbjct: 2726 EDAMT 2730
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 195 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 236
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2860 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2918
Query: 1290 EESST 1294
E++ T
Sbjct: 2919 EDAMT 2923
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
>UNIPROTKB|F1NGH4 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00530000063844
EMBL:AADN02019222 EMBL:AADN02019223 IPI:IPI00599739
Ensembl:ENSGALT00000009067 ArrayExpress:F1NGH4 Uniprot:F1NGH4
Length = 660
Score = 130 (50.8 bits), Expect = 0.00021, P = 0.00021
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 1222 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---- 1277
E E LP K + + LYCICR+P++ + MI C +C+EW+H DCV + A
Sbjct: 343 EPEELPK--SKPESEIYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLL 400
Query: 1278 ----EIYICAAC---KPQAEE-SSTPQN-VDGGRTNAEFLE 1309
E YIC C + Q E S T Q G+ N + E
Sbjct: 401 ERNGEDYICPNCTILQGQDESISETDQQEAKAGQVNVDGTE 441
>TAIR|locus:2120252 [details] [associations]
symbol:SHL1 "short life" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006833 "water transport" evidence=RCA] [GO:0006972
"hyperosmotic response" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009266 "response to temperature
stimulus" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR001025
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00439
GO:GO:0005634 EMBL:CP002687 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0009791 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AF277453 EMBL:AY050934
EMBL:AY079396 IPI:IPI00526215 RefSeq:NP_568053.1 UniGene:At.47993
UniGene:At.70103 ProteinModelPortal:Q9FEN9 SMR:Q9FEN9 IntAct:Q9FEN9
STRING:Q9FEN9 PRIDE:Q9FEN9 EnsemblPlants:AT4G39100.1 GeneID:830065
KEGG:ath:AT4G39100 TAIR:At4g39100 InParanoid:Q9FEN9 OMA:YDVQSAD
PhylomeDB:Q9FEN9 ProtClustDB:CLSN2689831 Genevestigator:Q9FEN9
Uniprot:Q9FEN9
Length = 228
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 1240 RSMLYCICRKPYD-EKAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQAEE--- 1291
R ++C C PY+ + M+ C +C EW+H C+ + P+ + C C PQ +
Sbjct: 137 RVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHN 196
Query: 1292 -SSTPQNVDGGRTNAEFLEPKTPSPKHT 1318
+ST N D LE KHT
Sbjct: 197 SNSTSNNRDAKVNGKRSLEVTKSKNKHT 224
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 125 (49.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2708 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2766
Query: 1290 EESST 1294
E++ T
Sbjct: 2767 EDAMT 2771
Score = 67 (28.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 125 (49.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2766 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2824
Query: 1290 EESST 1294
E++ T
Sbjct: 2825 EDAMT 2829
Score = 67 (28.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
>FB|FBgn0030120 [details] [associations]
symbol:CG17440 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG243978
GeneTree:ENSGT00530000063643 InterPro:IPR022056 Pfam:PF12269
EMBL:AY089443 RefSeq:NP_572555.1 UniGene:Dm.5009 SMR:Q8T3Y1
IntAct:Q8T3Y1 MINT:MINT-278662 EnsemblMetazoa:FBtr0071328
GeneID:31879 KEGG:dme:Dmel_CG17440 UCSC:CG17440-RA
FlyBase:FBgn0030120 InParanoid:Q8T3Y1 GenomeRNAi:31879
NextBio:775769 Uniprot:Q8T3Y1
Length = 366
Score = 127 (49.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 1207 DSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWY 1266
D+ + +++ IA +LP K L+ + YCICR + MI C C+EWY
Sbjct: 3 DNDKKTEEEIRREIAREFDLPERKSKIATILKQKDREYCICRSSDCSRFMIGCDGCEEWY 62
Query: 1267 HIDCVKLLS--APEI--YICAACKPQAEESST 1294
H DC+++ A I Y C CK + E T
Sbjct: 63 HGDCIEITEKDAEHIKNYYCRRCKKENPELQT 94
Score = 43 (20.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1289 AEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEP 1329
++++ P R N+ EPK P T + K KA P
Sbjct: 137 SQQAPPPTTAAAKRKNSSAQEPKESQP--TQAGTKRDKAAP 175
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 125 (49.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1289
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2827 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2885
Query: 1290 EESST 1294
E++ T
Sbjct: 2886 EDAMT 2890
Score = 67 (28.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
>UNIPROTKB|H0YI82 [details] [associations]
symbol:ASH1L "Histone-lysine N-methyltransferase ASH1L"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL139410 EMBL:AL353807
HGNC:HGNC:19088 ChiTaRS:ASH1L Ensembl:ENST00000492987
Uniprot:H0YI82
Length = 154
Score = 109 (43.4 bits), Expect = 0.00046, P = 0.00046
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 1213 LDKVF-ELIAEGENLPVYL-EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDC 1270
+D++ E +E ++ + EKE + ++ CIC DE MI C +C W H DC
Sbjct: 40 IDEIVGETASEADSSETSVSEKENGHEKDDDVIRCICGLYKDEGLMIQCDKCMVWQHCDC 99
Query: 1271 VKLLSAPEIYICAACKPQ 1288
+ + S E Y+C C P+
Sbjct: 100 MGVNSDVEHYLCEQCDPR 117
>UNIPROTKB|E2RCA1 [details] [associations]
symbol:DIDO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00530000063844
EMBL:AAEX03014133 Ensembl:ENSCAFT00000038284 Uniprot:E2RCA1
Length = 559
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 1207 DSGALSLD-KVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEW 1265
D G L+ K + I G+ V +K + LYCICR+P++ + MI C +C+EW
Sbjct: 231 DGGDRELEGKAAQGIEGGDPGDVGRQKPECEAYEPNALYCICRQPHNNRFMICCDRCEEW 290
Query: 1266 YHIDCVKLLSAP--------EIYICAACKP-QAEESSTPQNVD 1299
+H DCV + A E YIC C Q ++ + ++ +
Sbjct: 291 FHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETNSESTE 333
>RGD|1311173 [details] [associations]
symbol:Dido1 "death inducer-obliterator 1" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1311173 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063844 IPI:IPI00949673
Ensembl:ENSRNOT00000066451 UCSC:RGD:1311173 ArrayExpress:D4A6I1
Uniprot:D4A6I1
Length = 616
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 1243 LYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP--------EIYICAAC---KPQAEE 1291
LYCICR+P++ + MI C +C+EW+H DCV + A E YIC C + Q E
Sbjct: 266 LYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDET 325
Query: 1292 SST 1294
SS+
Sbjct: 326 SSS 328
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 127 (49.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1204 VVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDE-KAMIACYQC 1262
V + S D+ +L A + K + + LYCIC+ PYDE K I C +C
Sbjct: 2572 VPISSQKRKRDEERDLSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRC 2631
Query: 1263 DEWYHIDCVKLLSAP----EIYICAACKPQAEESST 1294
WYH CV +L + + Y+C C+ E++ T
Sbjct: 2632 QNWYHGRCVGILQSEADLIDEYVCPQCQ-STEDAMT 2666
Score = 67 (28.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 253 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 294
Score = 47 (21.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1082 EVVDVA--LECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAR-EAAGVFDRQSNSALD 1138
++++V+ +TC VK S LD L + T+ K R E + N +
Sbjct: 1019 DIINVSEGFHLRTCYKRKVK--SSKLDGLLERRIKQFTLEEKQRLERMKLEASAKNGGIQ 1076
Query: 1139 -FALARNLWRVRVSKLLEGLTKPTIGQIQNYLKE 1171
+ +NL +++ K+ EG T Q Q Y+ +
Sbjct: 1077 SLSSQKNLDELQMKKVKEGSQSVTSSQNQTYVSD 1110
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 127 (49.8 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1204 VVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDE-KAMIACYQC 1262
V + S D+ +L A + K + + LYCIC+ PYDE K I C +C
Sbjct: 2585 VPISSQKRKRDEERDLSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRC 2644
Query: 1263 DEWYHIDCVKLLSAP----EIYICAACKPQAEESST 1294
WYH CV +L + + Y+C C+ E++ T
Sbjct: 2645 QNWYHGRCVGILQSEADLIDEYVCPQCQ-STEDAMT 2679
Score = 67 (28.6 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 990 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1029
C K + L C C YHL+C++P EV + + +C
Sbjct: 253 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 294
Score = 47 (21.6 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1082 EVVDVA--LECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAR-EAAGVFDRQSNSALD 1138
++++V+ +TC VK S LD L + T+ K R E + N +
Sbjct: 889 DIINVSEGFHLRTCYKRKVK--SSKLDGLLERRIKQFTLEEKQRLERMKLEASAKNGGIQ 946
Query: 1139 -FALARNLWRVRVSKLLEGLTKPTIGQIQNYLKE 1171
+ +NL +++ K+ EG T Q Q Y+ +
Sbjct: 947 SLSSQKNLDELQMKKVKEGSQSVTSSQNQTYVSD 980
>UNIPROTKB|B0QZZ2 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
IPI:IPI00879803 SMR:B0QZZ2 Ensembl:ENST00000437224
HOGENOM:HOG000197780 HOVERGEN:HBG097304 Uniprot:B0QZZ2
Length = 115
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1243 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|B0QZZ3 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
HOGENOM:HOG000197780 HOVERGEN:HBG097304 IPI:IPI00744123 SMR:B0QZZ3
Ensembl:ENST00000425862 Uniprot:B0QZZ3
Length = 126
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1243 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|B0QZZ4 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
IPI:IPI00879292 SMR:B0QZZ4 Ensembl:ENST00000433120
Ensembl:ENST00000445025 Uniprot:B0QZZ4
Length = 97
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1243 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|Q5JPR8 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
HOGENOM:HOG000197780 HOVERGEN:HBG097304 IPI:IPI00645913 SMR:Q5JPR8
Ensembl:ENST00000415025 Uniprot:Q5JPR8
Length = 114
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1243 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|K7GQN1 [details] [associations]
symbol:PHF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00550000074396 EMBL:FP015844
Ensembl:ENSSSCT00000034159 Uniprot:K7GQN1
Length = 97
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1243 LYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
+YC+CR PYD + MI C C +W+H CV + ++Y C C+
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54
>UNIPROTKB|F1NFF0 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.472.30 InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:AADN02019222 EMBL:AADN02019223
IPI:IPI00821338 Ensembl:ENSGALT00000039659 ArrayExpress:F1NFF0
Uniprot:F1NFF0
Length = 2253
Score = 130 (50.8 bits), Expect = 0.00092, P = 0.00092
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 1222 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---- 1277
E E LP K + + LYCICR+P++ + MI C +C+EW+H DCV + A
Sbjct: 271 EPEELPK--SKPESEIYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLL 328
Query: 1278 ----EIYICAAC---KPQAEE-SSTPQN-VDGGRTNAEFLE 1309
E YIC C + Q E S T Q G+ N + E
Sbjct: 329 ERNGEDYICPNCTILQGQDESISETDQQEAKAGQVNVDGTE 369
>UNIPROTKB|F1NGH5 [details] [associations]
symbol:Gga.41084 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
GO:GO:0005634 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.472.30 InterPro:IPR012921 Pfam:PF07744
SUPFAM:SSF46942 OMA:PNRMCAD GeneTree:ENSGT00530000063844
EMBL:AADN02019222 EMBL:AADN02019223 IPI:IPI00577866
Ensembl:ENSGALT00000009066 ArrayExpress:F1NGH5 Uniprot:F1NGH5
Length = 2287
Score = 130 (50.8 bits), Expect = 0.00093, P = 0.00093
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 1222 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---- 1277
E E LP K + + LYCICR+P++ + MI C +C+EW+H DCV + A
Sbjct: 271 EPEELPK--SKPESEIYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLL 328
Query: 1278 ----EIYICAAC---KPQAEE-SSTPQN-VDGGRTNAEFLE 1309
E YIC C + Q E S T Q G+ N + E
Sbjct: 329 ERNGEDYICPNCTILQGQDESISETDQQEAKAGQVNVDGTE 369
>FB|FBgn0030121 [details] [associations]
symbol:Cfp1 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0048188 "Set1C/COMPASS complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
InterPro:IPR001965 InterPro:IPR002857 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02008 PROSITE:PS50016 PROSITE:PS51058
SMART:SM00249 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
EMBL:AE014298 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0048188 GO:GO:0051568
eggNOG:NOG246725 GeneTree:ENSGT00530000063643 KO:K14960 OMA:YESQASF
InterPro:IPR022056 Pfam:PF12269 HSSP:Q80TJ7 RefSeq:NP_572556.1
ProteinModelPortal:Q9W352 SMR:Q9W352 IntAct:Q9W352 MINT:MINT-343493
STRING:Q9W352 PaxDb:Q9W352 PRIDE:Q9W352 EnsemblMetazoa:FBtr0071327
GeneID:31880 KEGG:dme:Dmel_CG17446 UCSC:CG17446-RA
FlyBase:FBgn0030121 InParanoid:Q9W352 OrthoDB:EOG43BK42
PhylomeDB:Q9W352 GenomeRNAi:31880 NextBio:775774 Bgee:Q9W352
Uniprot:Q9W352
Length = 663
Score = 124 (48.7 bits), Expect = 0.00095, P = 0.00095
Identities = 29/79 (36%), Positives = 36/79 (45%)
Query: 1220 IAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS--AP 1277
IA +LP K L+ YCICR + MI C C+EWYH DC+ + A
Sbjct: 38 IAREFDLPERKSKIATILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAK 97
Query: 1278 EI--YICAACKPQAEESST 1294
I Y C CK + E T
Sbjct: 98 HIKQYYCRRCKKENPELQT 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1383 1372 0.00088 124 3 11 22 0.37 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 137
No. of states in DFA: 638 (68 KB)
Total size of DFA: 656 KB (2285 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 125.09u 0.10s 125.19t Elapsed: 00:00:07
Total cpu time: 125.18u 0.10s 125.28t Elapsed: 00:00:07
Start: Mon May 20 16:38:32 2013 End: Mon May 20 16:38:39 2013
WARNINGS ISSUED: 1