BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000627
(1383 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 290/587 (49%), Gaps = 57/587 (9%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISS 238
P VCL H LC+C + + +L YR+TL EL + + + + +N +R +
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 239 SNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMD 298
+ + ++ +R S+ E+ S ++LQ L L EAE + +
Sbjct: 784 ED---GRKRSLEELRALESEARERRFPNS-ELLQRL------KNCLSEAEACVSRALGLV 833
Query: 299 AVRDMVNKLIEGRRWAEG-IRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEP 357
+ ++ + G + +RD L + N L C +G +
Sbjct: 834 SGQEAGPDRVAGLQMTLAELRDFLGQMNN-------------LPCAMHQIG------DVK 874
Query: 358 GHL-ILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSA 416
G L ++ Y EAR A +S S L+ L R L + + E+++L +++ A
Sbjct: 875 GILEQVEAYQTEAR------EALVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQA 928
Query: 417 KVWRDSVRKCI---SNKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKMIGQAESCR 471
+ W D V++ + + + AI +L S A +D + ++ LL + + E
Sbjct: 929 R-WLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKA 987
Query: 472 ARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGR 531
C EA R T+E ++ E + V++P ++ LK+ + A WIA +++I NG
Sbjct: 988 HLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQSLKEALAKARAWIADVDEIQ---NG- 1042
Query: 532 KDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALKA 577
D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1043 -DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1088
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + ++ L LESEA + + P +++L ++ +
Sbjct: 762 KLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRF--PNSELLQRLKNCL 819
Query: 465 GQAESCRARC----SEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 520
+AE+C +R S G + +++ L EL DF M L A+ I
Sbjct: 820 SEAEACVSRALGLVSGQEAGPDRVAGLQMTLAELRDFLGQMNNLPC-------AMHQIGD 872
Query: 521 LNDILVNINGRK--------DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE 572
+ IL + + Q + L +L+ G L ++V + ++ ++++A +
Sbjct: 873 VKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLD 932
Query: 573 ---KALKACDTKMPLDFIRQ--VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL- 626
+ L + L +R V +V +K +L +L A RWEE+A L
Sbjct: 933 EVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLE 992
Query: 627 -IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPASC 684
K E II +++I V LP++ ++ ++ A++W+ + E+ +
Sbjct: 993 ARQKHPPATLEAIIHEAENIPVHLPNIQSLKEALAKARAWIADVDEIQNGDHYPC----- 1047
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L+ L+ LV+ + L + L+E +LE + W+ AS
Sbjct: 1048 ----LDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKAS 1086
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2 SV=1
Length = 1545
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 288/608 (47%), Gaps = 108/608 (17%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 542 MKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 601
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 602 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHK 661
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 662 EMFIMVQEERRLRKALLEKGITEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 716
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISS 238
P VCL H LC+C + + +L YR+TL EL + + + + +N
Sbjct: 717 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKIRAESFDTWANK------- 769
Query: 239 SNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMD 298
VRV + VE S + L+ L S EA + + E+
Sbjct: 770 -------------VRVALE--VEDGRKRSFEELRALES---------EARERRFPNSEL- 804
Query: 299 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGF--------- 349
+ +R+C+H+AE CV+++LG
Sbjct: 805 ---------------LQRLRNCMHEAEA---------------CVSQVLGLVSGQEARIQ 834
Query: 350 -DPLPCNEPGHLILQ--------NYAEEARSLIQEINA-------ALSA-CSKISELELL 392
PL E L+ Q + E+ + +++++ A AL++ C + + L
Sbjct: 835 TSPLTLTELRVLLEQMSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCPSVGLMRSL 894
Query: 393 YSRASGLPICIVESEKLSQRISSAKVWRDSVRKCI---SNKCPAAIEIDVLYKLESEALD 449
+ L + + E+ +L Q++ A+ W D V+K + + + I +L A
Sbjct: 895 LEKGQQLGVDVPEAHQLQQQVEQAR-WLDDVKKALAPSAQRGSLVIMQGLLVTGTKIASS 953
Query: 450 LKIDVPETDM--LLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELL 507
+D ++ LL + + E C EA R T+E +++E + V++P ++ L
Sbjct: 954 PCVDKARAELQELLTIAERWEEKAHFCLEA-RQKHPPATLEAIIREAENIPVHLPNIQAL 1012
Query: 508 KQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKK 567
K + A WIA +++I NG D + +D+L C++ G L + +++L +E+++
Sbjct: 1013 KDALAKAQAWIADVDEIQ---NG--DHYPCLDDLECLVAVGRDLPVSLEELRQLELQVLT 1067
Query: 568 AHC-REKA 574
AH REKA
Sbjct: 1068 AHSWREKA 1075
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 152/342 (44%), Gaps = 36/342 (10%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + + L LESEA + + P +++L ++ +
Sbjct: 755 KLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRF--PNSELLQRLRNCM 812
Query: 465 GQAESCRARCSEALRGS--------MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF 516
+AE+C ++ + G ++L + +LL+++ M ++E +K+
Sbjct: 813 HEAEACVSQVLGLVSGQEARIQTSPLTLTELRVLLEQMSSLPCAMHQIEDVKEVLEQVEA 872
Query: 517 WIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE---K 573
+ + L ++ + + +L++G L + V + ++ ++++A + K
Sbjct: 873 YQIEAREALASLCPS------VGLMRSLLEKGQQLGVDVPEAHQLQQQVEQARWLDDVKK 926
Query: 574 ALKACDTKMPLDFIRQ--VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL--IHK 629
AL + L ++ VT + +K +L +L A RWEE+A L K
Sbjct: 927 ALAPSAQRGSLVIMQGLLVTGTKIASSPCVDKARAELQELLTIAERWEEKAHFCLEARQK 986
Query: 630 AQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLR 688
E IIR +++I V LP++ +++ ++ A++W+ + E+ +
Sbjct: 987 HPPATLEAIIREAENIPVHLPNIQALKDALAKAQAWIADVDEIQNGDHYPC--------- 1037
Query: 689 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 730
L+ L+ LV+ + L +SL+E +LE + W+ AS +
Sbjct: 1038 LDDLECLVAVGRDLPVSLEELRQLELQVLTAHSWREKASRMF 1079
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 982 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP--TEVDRNHAEAYICPYC 1032
+ + +C C ++ + L+C C D YH+ CL P E+ R + CP C
Sbjct: 315 IDLYVCRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRG---VWRCPKC 364
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/597 (28%), Positives = 280/597 (46%), Gaps = 77/597 (12%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQIS- 237
P VCL H LC+C + + +L YR+TL EL + + + + +N +R +
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 238 ------SSNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFL 291
S L + + R S+L++Q +C L + S +EA
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQQLKNC-LSEAEACVSRALGLVSGQEAGPHR 842
Query: 292 WAGFEMD-----AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNEL 346
AG +M A D +N L ++ L + E
Sbjct: 843 VAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--------------------- 881
Query: 347 LGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVES 406
Y EAR A S S L+ L R L + + E+
Sbjct: 882 -----------------AYQAEAR------EALASLPSSPGLLQSLLERGRQLGVEVPEA 918
Query: 407 EKLSQRISSAKVWRDSVRKCI---SNKCPAAIEIDVLYKLESEALDLKIDVPETDM--LL 461
++L +++ A+ W D V++ + + + A+ +L S A +D + ++ LL
Sbjct: 919 QQLQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELL 977
Query: 462 KMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARL 521
+ + E C EA R T+E +++E + V++P ++ LK+ + A WIA +
Sbjct: 978 TIAERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADV 1036
Query: 522 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALKA 577
++I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1037 DEIQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1088
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 145/342 (42%), Gaps = 39/342 (11%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + ++ L LESEA + + P +++L ++ +
Sbjct: 762 KLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRF--PNSELLQQLKNCL 819
Query: 465 GQAESCRARCSEALRGS-----------MSLKTVELLLQELGDFTVNMPELELLKQYHSD 513
+AE+C +R + G M+L + L ++ + M ++ +K
Sbjct: 820 SEAEACVSRALGLVSGQEAGPHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQ 879
Query: 514 AIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE- 572
+ A + L ++ L +L+ G L ++V + ++ ++++A +
Sbjct: 880 VEAYQAEAREALASLPSSPGL------LQSLLERGRQLGVEVPEAQQLQRQVEQARWLDE 933
Query: 573 --KALKACDTKMPLDFIRQ--VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL-- 626
+ L + L +R V +V +K +L +L A RWEE+A L
Sbjct: 934 VKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEA 993
Query: 627 IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCS 685
K E IIR +++I V LP++ ++ ++ A++W+ + E+ +
Sbjct: 994 RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC------ 1047
Query: 686 LLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L+ L+ LV+ + L + L+E +LE + W+ AS
Sbjct: 1048 ---LDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKAS 1086
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 278/598 (46%), Gaps = 79/598 (13%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 508 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 567
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 568 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 627
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 628 EMFIMVQEERRLRKALLEKGITEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 682
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQIS- 237
P VCL H LC+C + + +L YR+TL EL + + + + +N +R +
Sbjct: 683 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 742
Query: 238 ------SSNRPTTLTKKVKGVRVTMSQLVEQWLSC------SLKVLQGLFSSDAYGTLLR 285
S L + + R S+L+++ +C + GL S G
Sbjct: 743 EDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRV 802
Query: 286 EAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNE 345
Q A E+ A D +N L ++ L + E
Sbjct: 803 AGLQMTLA--ELRAFLDQMNNLPCAMHQIGDVKGILEQVE-------------------- 840
Query: 346 LLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVE 405
Y EAR A S S L+ L R L + + E
Sbjct: 841 ------------------AYQAEAR------EALASLPSSPGLLQSLLERGRQLGVEVPE 876
Query: 406 SEKLSQRISSAKVWRDSVRKCI---SNKCPAAIEIDVLYKLESEALDLKIDVPETDM--L 460
+++L +++ A+ W D V++ + + + A+ +L S A +D + ++ L
Sbjct: 877 AQQLQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQEL 935
Query: 461 LKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 520
L + + E C EA R T+E ++ E + V++P ++ LK+ + A WIA
Sbjct: 936 LTIAERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIAD 994
Query: 521 LNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALKA 577
+++I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 995 VDEIQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1047
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 144/342 (42%), Gaps = 39/342 (11%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + ++ L LESEA + + P +++L ++ +
Sbjct: 721 KLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRF--PNSELLQRLKNCL 778
Query: 465 GQAESCRARCSEALRGS-----------MSLKTVELLLQELGDFTVNMPELELLKQYHSD 513
+AE+C +R + G M+L + L ++ + M ++ +K
Sbjct: 779 SEAEACVSRALGLVSGQEAGPHRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQ 838
Query: 514 AIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE- 572
+ A + L ++ L +L+ G L ++V + ++ ++++A +
Sbjct: 839 VEAYQAEAREALASLPSSPGL------LQSLLERGRQLGVEVPEAQQLQRQVEQARWLDE 892
Query: 573 --KALKACDTKMPLDFIRQ--VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL-- 626
+ L + L +R V +V +K +L +L A RWEE+A L
Sbjct: 893 VKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEA 952
Query: 627 IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCS 685
K E II +++I V LP++ ++ ++ A++W+ + E+ +
Sbjct: 953 RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC------ 1006
Query: 686 LLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L+ L+ LV+ + L + L+E +LE + W+ AS
Sbjct: 1007 ---LDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKAS 1045
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2 SV=1
Length = 1556
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 277/598 (46%), Gaps = 79/598 (13%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 549 MKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 608
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 609 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHK 668
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 669 EMFIMVQEERRLRKALLEKGITEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 723
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQIS- 237
P VCL H LC+C + + +L YR+TL EL + + + + +N +R +
Sbjct: 724 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEV 783
Query: 238 ------SSNRPTTLTKKVKGVRVTMSQLVEQWLSC------SLKVLQGLFSSDAYGTLLR 285
S L + + R S+L+++ +C + GL S G
Sbjct: 784 EDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRV 843
Query: 286 EAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNE 345
Q A E+ A D +N L ++ L + E
Sbjct: 844 AGLQMTLA--ELRAFLDQMNNLPCAMHQIGDVKGILEQVE-------------------- 881
Query: 346 LLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVE 405
Y EAR A S S L+ L R L + + E
Sbjct: 882 ------------------GYQAEAR------EALASLPSSPGLLQSLLERGQQLGVEVPE 917
Query: 406 SEKLSQRISSAKVWRDSVRKCI---SNKCPAAIEIDVLYKLESEALDLKIDVPETDM--L 460
+++L +++ A+ W D V++ + + + A+ +L S A +D ++ L
Sbjct: 918 AQQLQRQVEQAR-WLDEVKRTLAPAARRGTLAVMRGLLVAGASVAPSPAVDKARAELQEL 976
Query: 461 LKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 520
L + + E C EA R T+E ++ E + V++P ++ LK+ + A WIA
Sbjct: 977 LTIAERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIAD 1035
Query: 521 LNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALKA 577
+++I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1036 VDEIQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1088
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + ++ L LESEA + + P +++L ++ +
Sbjct: 762 KLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRF--PNSELLQRLKNCL 819
Query: 465 GQAESCRARC----SEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 520
+AE+C +R S G + +++ L EL F M L A+ I
Sbjct: 820 SEAEACVSRALGLVSGQEAGPHRVAGLQMTLAELRAFLDQMNNLPC-------AMHQIGD 872
Query: 521 LNDILVNINGRKDQ--------HNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE 572
+ IL + G + + + L +L+ G L ++V + ++ ++++A +
Sbjct: 873 VKGILEQVEGYQAEAREALASLPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLD 932
Query: 573 ---KALKACDTKMPLDFIRQ--VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL- 626
+ L + L +R V +V +K +L +L A RWEE+A L
Sbjct: 933 EVKRTLAPAARRGTLAVMRGLLVAGASVAPSPAVDKARAELQELLTIAERWEEKAHLCLE 992
Query: 627 -IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPASC 684
K E II +++I V LP++ ++ ++ A++W+ + E+ +
Sbjct: 993 ARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC----- 1047
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L+ L+ LV+ + L + L+E +LE + W+ AS
Sbjct: 1048 ----LDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKAS 1086
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 275/599 (45%), Gaps = 84/599 (14%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +E C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVL----MSEEEVFELVPDDER-QCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISS 238
P VCL H LC C +K L YR+ L +L L
Sbjct: 693 NPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLY---------------------- 730
Query: 239 SNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDA----YGTLLREAEQFLWAG 294
GV+V +Q + W+S + L F+ +L +AE +
Sbjct: 731 ------------GVKVR-AQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYP- 776
Query: 295 FEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFD---- 350
E D R + + + E A + L K + P S + +L V EL F
Sbjct: 777 -ENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKL-TVEELKAFVQQLF 834
Query: 351 PLPCNEPGHLILQNYAEEARSLIQEI--------NAALSACSKISELELLYSRASGLPIC 402
LPC +I Q A + ++L+ ++ A + S+L++L S L +
Sbjct: 835 SLPC-----VISQ--ARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVE 887
Query: 403 IVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKID------VPE 456
+ E +L Q + A+ W D VR +S+ P + +DV+ KL + L + E
Sbjct: 888 LPELPRLKQELQQAR-WLDEVRLTLSD--PQQVTLDVMKKLIDSGVGLAPHHAVEKAMAE 944
Query: 457 TDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF 516
LL + + E C +A R S+ ++E ++ E + +P + LK+ A
Sbjct: 945 LQELLTVSERWEEKAKVCLQA-RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKARE 1003
Query: 517 WIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKA 574
W A++ I N + +++L + +G + ++++ LP VE ++ A RE+
Sbjct: 1004 WTAKVEAIQSGSN-----YAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERT 1057
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 157/369 (42%), Gaps = 59/369 (15%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W V + +S N IE+ V+ + +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVMLE---DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESC---------------RARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQY 510
+AE+C ++ S R ++++ ++ +Q+L + + +K
Sbjct: 790 EAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNL 849
Query: 511 HSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH- 569
D + R + ++ D+ +L ++ G+SL +++ +LP ++ EL++A
Sbjct: 850 LDDVEEFHERAQEAMM------DETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 570 CREKALKACDT-KMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
E L D ++ LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 627 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + + E I+ +++I LP++ ++ + A+ W E + +
Sbjct: 964 QARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGS-------- 1015
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERW----------QNHASSLLQDAR 734
+ LE L+ L ++ + + + L+ ++E + W +N + +LLQ
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQ--- 1072
Query: 735 CLLDKDDIG 743
L + DIG
Sbjct: 1073 VLSPRTDIG 1081
Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 982 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKC 340
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 265/588 (45%), Gaps = 75/588 (12%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
MR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G
Sbjct: 518 MRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQG 577
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+ +A LD ++ + +
Sbjct: 578 YNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCK 637
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
EL + +E RE + + G++ M + E V +E C CR +LSA+ C C
Sbjct: 638 ELTLMTEEETRLRESVVQMGVV----MSEEEVFELVPDDER-QCSACRTTCFLSALTCSC 692
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISS 238
P VCL H LC C + L YR+ L +L L
Sbjct: 693 NPERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLY---------------------- 730
Query: 239 SNRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDA----YGTLLREAEQFLWAG 294
GV+V +Q + W++ + L F+ +L +AE +
Sbjct: 731 ------------GVKVR-AQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDRKYP- 776
Query: 295 FEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLD-CVNELLGF---- 349
E D R + + + E + L K + SDS K R V EL F
Sbjct: 777 -ENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHRQ--SSDSGKTRTKLTVEELKAFVQQL 833
Query: 350 DPLPCNEPGHLILQNY---AEEARSLIQEINAALSACSKISELELLYSRASGLPICIVES 406
LPC ++N EE QE A + S+L++L S L + + E
Sbjct: 834 VSLPCVISQTRQVKNLLDDVEEFHERAQE--AMMDETPDSSKLQMLIDMGSSLYVELPEL 891
Query: 407 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKID------VPETDML 460
+L Q + A+ W D VR +S+ P + +DV+ KL + L + E L
Sbjct: 892 PRLKQELQQAR-WLDEVRLTLSD--PQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQEL 948
Query: 461 LKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 520
L + + E C +A R S+ +E ++ E + +P + LK+ A W A+
Sbjct: 949 LTVSERWEEKAKVCLQA-RPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAK 1007
Query: 521 LNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKA 568
+ I N + +++L + +G + +++D LP VE ++ A
Sbjct: 1008 VEAIQSGNN-----YAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 157/369 (42%), Gaps = 59/369 (15%)
Query: 412 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 465
R S W + V + +S N IE+ V+ + +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVMLE---DAEDRKY--PENDLFRKLRDAVK 789
Query: 466 QAESC---------------RARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQY 510
+AE+C ++ S R ++++ ++ +Q+L + + +K
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNL 849
Query: 511 HSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH- 569
D + R + ++ D+ +L ++ G+SL +++ +LP ++ EL++A
Sbjct: 850 LDDVEEFHERAQEAMM------DETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 570 CREKALKACDT-KMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 626
E L D ++ LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 627 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 684
+ + M E+I+ +++I LP++ ++ + A+ W E +
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGN-------- 1015
Query: 685 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERW----------QNHASSLLQDAR 734
+ LE L+ L ++ + + + L ++E + W +N + +LLQ
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQ--- 1072
Query: 735 CLLDKDDIG 743
L + DIG
Sbjct: 1073 VLSPRTDIG 1081
Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 982 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGD-WRCPKC 340
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 231/515 (44%), Gaps = 119/515 (23%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVP+Y Q G FVITFPRSYH+GFN G
Sbjct: 520 MKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQG 579
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DW+P G D Y+Q H+ V SH+E++C +A K+D LD ++ +++
Sbjct: 580 FNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKADCLDVVLASAVQK 639
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEY-VGTEEDPTCIICRQYLYLSAVACR 177
++ + +ER RE++ + G+ + +Y + +++ C+ CR YLSA+ C
Sbjct: 640 DMQLMIKEERELREKVRKMGVAQCELF------QYDLLADDERQCVKCRTTCYLSALTCP 693
Query: 178 CRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL----------------------- 214
CRP VCL H LC C L YR TL +LY +
Sbjct: 694 CRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPMMNAVRQRAEYYDDWASRVTEVME 753
Query: 215 -----------FLTVDRNSSEETSESNNLRRQI--------------------------- 236
F T+ S+E++ N+L RQ+
Sbjct: 754 AKLDKKRNVTVFRTLLEESNEQSFPENDLLRQLRLVTQDAEKCSSVAQQLLNGKRQTRYR 813
Query: 237 -SSSNRPTTLTKKVKGVRVTMSQL-------------------VEQWLSCSLKVLQGLFS 276
+ P LT V+ +R + QL +E + S K+L S
Sbjct: 814 TGKAKSPNQLT--VEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSDEVS 871
Query: 277 SDAYG---TLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGS 333
+DA +LL E QF E+ +R+ +E RW G+ H+AE+ + P
Sbjct: 872 ADAVSEIESLLEEGSQFDVFLPELPLLRER----LEQARWLTGV----HQAEDPVANPCG 923
Query: 334 DSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSA---------CS 384
S + ++ +G P P E LQ + L + A L A CS
Sbjct: 924 LSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENAQALLKARPPESLETLCS 983
Query: 385 KISELELLYSRASGLPICIVESEKLSQRISSAKVW 419
++++E + + LP C++ L ++ AK W
Sbjct: 984 MLTQVEGV---PAYLPNCLL----LQDTVNRAKEW 1011
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 139/345 (40%), Gaps = 39/345 (11%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
+ QR W V + + K + V L E+ + PE D+L L+++ Q
Sbjct: 734 VRQRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQSF--PENDLLRQLRLVTQ 791
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 525
AE C + + L G + + TV + + Y+ A L L
Sbjct: 792 DAEKCSSVAQQLLNGKRQTRYRTGKAKSPNQLTVEEMRSFVRQLYNLPCSLTQAPLLKEL 851
Query: 526 VNINGRKDQH-----------NVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKA 574
+N QH + + E+ +L+EG+ + + +LPL+ L++A
Sbjct: 852 LNSIEDFQQHSEKLLSDEVSADAVSEIESLLEEGSQFDVFLPELPLLRERLEQARWLTGV 911
Query: 575 LKACDT-----KMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILI 627
+A D + L+ +R++ V L E++ L +L + EE A +L
Sbjct: 912 HQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENAQALL- 970
Query: 628 HKAQMCEFED----IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSE-LFLASAFAVAPA 682
KA+ E + ++ + + LP+ +Q+ ++ AK WL+ +E L + V
Sbjct: 971 -KARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGGQVPV--- 1026
Query: 683 SCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
SL D+V ++ + + L+ +LE ++ + W+ A+
Sbjct: 1027 ------FSSLSDMVLRAHSIPVRLEPLDQLEVQVSEVQSWKETAA 1065
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 982 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
V + +C+ C + E L+C C D YH CL P D + + CP C
Sbjct: 293 VDLYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGD-WRCPKC 342
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 161/579 (27%), Positives = 270/579 (46%), Gaps = 69/579 (11%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITFPR+YH+GFN G
Sbjct: 509 MKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQG 568
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D LD V+ +++
Sbjct: 569 FNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQK 628
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+M RE++ + G+ S + P +++ C C+ ++SAV C C
Sbjct: 629 DMAIMIDDEKMLREKVQKLGVTDSERVAFELFP-----DDERQCYKCKTTCFMSAVYCPC 683
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISS 238
+P VCL H E LC C T + L YR+TL ELY + N+ + +ES N +
Sbjct: 684 KPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPMM-----NALKMRAESYNE----WA 734
Query: 239 SNRPTTLTKKVKGVR--VTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFE 296
SN L K+ R ++ L+E+ LK F + LR Q +
Sbjct: 735 SNVNEALEAKISNKRSLISFKALIEE---SELKK----FPDNDLLRHLRLVTQ------D 781
Query: 297 MDAVRDMVNKLIEGR---RWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGF---- 349
D + +L+ G+ R+ G C ++ VNEL F
Sbjct: 782 ADKCASVAQQLLNGKRQTRYRSGGGKCPNQL-----------------TVNELRLFVRQL 824
Query: 350 DPLPCNEPGHLILQNYAEEARSLIQEINAALS-ACSKISELELLYSRASGLPICIVESEK 408
LPC +L++ + + Q+ LS +EL+ L + + + + +
Sbjct: 825 YALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAE 884
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM----- 463
L R+ A+ W + V+ + + ++ +D + +L + L + K+
Sbjct: 885 LRVRLEQAR-WLEDVQMASAEQ--NSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLT 941
Query: 464 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ + +AR R SL ++ + ++E+ + +P LK A W+ +
Sbjct: 942 VSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEA 1001
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVE 562
+ + GR V+D L ++ G S+ + +D LP +E
Sbjct: 1002 L--QVGGRVP---VLDTLVELVTRGRSIPVHLDYLPRLE 1035
Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 976 NKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 276 KKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 331
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 171/438 (39%), Gaps = 50/438 (11%)
Query: 409 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 466
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 723 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 780
Query: 467 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 524
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 781 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 840
Query: 525 LVNINGRKDQHNVI--------DELNCILKEGASLRIQVDDLPLVEVELKKAHCRE--KA 574
L + + Q + EL +L + + L + V L++A E +
Sbjct: 841 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 900
Query: 575 LKACDTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 631
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 901 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 960
Query: 632 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 690
+ ++ ++I LPS +++ + A+ WL+ E L+
Sbjct: 961 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRVPV--------LD 1012
Query: 691 SLKDLVSQSKFLKISLKEQTELEKVINNCERW----------QNHASSLLQDARCLLDKD 740
+L +LV++ + + + L LE ++ + W +N SLL+ L +
Sbjct: 1013 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLE---VLCPRC 1069
Query: 741 DIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSV 800
DIG + L K ++L M S G +S+L+ A S A++ L
Sbjct: 1070 DIG---TLGLKRKQKKLKEPMPS----GKKRSTKLESLSDLERALSESKDTASAMATLGE 1122
Query: 801 S--PSLEDVESLMAVAEG 816
+ +E + SL A EG
Sbjct: 1123 ARLKEMEALRSLRAANEG 1140
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 134/217 (61%), Gaps = 7/217 (3%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 534 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 593
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 594 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 653
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P +++ CI C+ ++SA++C C
Sbjct: 654 DMAIMIEDEKALRETVRKLGVIDSERMDFELLP-----DDERQCIKCKTTCFMSAISCSC 708
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF 215
+P VCL H + LC C K +L YR+TL +LY +
Sbjct: 709 KPGLLVCLHHVKELCSCPPYKYNLRYRYTLDDLYPMM 745
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 981 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
+V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 306 AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGD-WRCPKC 356
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 133/217 (61%), Gaps = 7/217 (3%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LF +QPDLL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G
Sbjct: 534 MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG 593
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKR 118
N AEAVNF DWLP G + Y+ H+ V SH+E++C +A K+D LD V+ +++
Sbjct: 594 FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK 653
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ RE + + G+I S M P +++ C+ C+ ++SA++C C
Sbjct: 654 DMAIMIEDEKALRETVRKLGVIDSERMDFELLP-----DDERQCVKCKTTCFMSAISCSC 708
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF 215
+P VCL H + LC C K L YR+TL +LY +
Sbjct: 709 KPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMM 745
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 118/287 (41%), Gaps = 26/287 (9%)
Query: 455 PETDML--LKMIGQ-AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYH 511
P+ D+L L+++ Q AE C + + L G + + TVN + + Y
Sbjct: 792 PDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYA 851
Query: 512 SDAIFWIARLNDILVNINGRKDQHN---------VIDELNCILKEGASLRIQVDDLPLVE 562
+ L L+N QH+ EL +L +++ L +
Sbjct: 852 LPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMR 911
Query: 563 VELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRW 618
+ L++A E+ +AC + + LD +R++ V L EK L +L + W
Sbjct: 912 IRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHW 971
Query: 619 EERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASA 676
+++A +L + + + ++ ++I LP+ +++ + A+ WL++ E A
Sbjct: 972 DDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGG 1031
Query: 677 FAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 723
L++L +LV++ + + + L LE ++ + W+
Sbjct: 1032 RVPV--------LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWK 1070
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 977 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
K +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 302 KATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 356
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 7/213 (3%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 548 MKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 607
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 608 YNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHK 667
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KGI ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 668 EMFIMVQEERRLRKTLLEKGITEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 722
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
P + VCL H LC+C + +L YR+TL EL
Sbjct: 723 CPDSLVCLSHINDLCKCSRNRQYLRYRYTLDEL 755
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 156/349 (44%), Gaps = 37/349 (10%)
Query: 407 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM--- 463
+KL R S W + V+ + + + L LESEA D + P +++L ++
Sbjct: 760 QKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRF--PNSELLQRLKKC 817
Query: 464 IGQAESCRARCSEALRGS--------MSLKTVELLLQELGDFTVNMPELELLKQYHSDAI 515
+ +AE+C ++ + S ++L ++LLL+++G M +++ +K
Sbjct: 818 LTEAEACISQVLGLISNSEDRLQTPQITLTELQLLLKQMGTLPCTMHQIDEVKDVLQQVE 877
Query: 516 FWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREK-- 573
+ + L ++ ++ L ++++G LR++V + +E L++A ++
Sbjct: 878 SYQIETREALTSLP------YSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVK 931
Query: 574 -ALKACDTKMPLDFIRQ--VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL--IH 628
AL + L +++ V V K +L +L A WEE+A L
Sbjct: 932 QALAPSGQRHSLVIMKKLLVMGTKVASSPSVNKARAELQELLTIAECWEEKAHFCLKASQ 991
Query: 629 KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLL 687
K E IIR +++I V LP++ ++ ++ A++W+ + +E+ +
Sbjct: 992 KHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHYPC-------- 1043
Query: 688 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQDARC 735
L+ L+ LV+ + L + L+E +LE + W+ AS + L+ C
Sbjct: 1044 -LDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSC 1091
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 63/247 (25%)
Query: 386 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 445
++EL+LL + LP + + +++ + + ++ R+ +++ P ++EI L L
Sbjct: 846 LTELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTS-LPYSLEI--LQSLME 902
Query: 446 EALDLKIDVPETDMLLKMIGQAE------------------------------------- 468
+ L+++VPE L +++ QA+
Sbjct: 903 KGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMGTKVASSPSV 962
Query: 469 -SCRARCSEAL--------RGSMSLK--------TVELLLQELGDFTVNMPELELLKQYH 511
RA E L + LK T+E++++E + V +P ++ LK+
Sbjct: 963 NKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSLKEAL 1022
Query: 512 SDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC- 570
+ A WIA +N+I NG D + +D+L ++ G L +++++L +E ++ AH
Sbjct: 1023 TKAQAWIADVNEIQ---NG--DHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSW 1077
Query: 571 REKALKA 577
+EKA K
Sbjct: 1078 KEKASKT 1084
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 986 LCMCCESDSKELEFLICSACKDCYHLQCLRP--TEVDRNHAEAYICPYCQYFESESVSQF 1043
+C C + +FL+C C D YH+ CL P +EV + + CP C E +S +
Sbjct: 325 VCRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKG---VWRCPKCILAECKSPPEA 381
Query: 1044 GG 1045
G
Sbjct: 382 FG 383
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 139/235 (59%), Gaps = 7/235 (2%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 539 MKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 598
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 599 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHK 658
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KG+ ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 659 EMFIMVQEERRLRKALLEKGVTEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 713
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLR 233
P VCL H LC+C + + +L YR+TL EL + + + + +N +R
Sbjct: 714 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVR 768
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 148/345 (42%), Gaps = 48/345 (13%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + + L LESEA + + P +++L ++ +
Sbjct: 752 KLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRF--PNSELLQRLKNCL 809
Query: 465 GQAESCRARCSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E+C A+ + G ++ + T +L L EL M L A+ I + D
Sbjct: 810 SEVEACIAQVLGLVSGQVARMDTPQLTLTELRVLLEQMGSLPC-------AMHQIGDVKD 862
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 583
+L + +D+ + L + LR ++ + VE+ +AH ++ ++
Sbjct: 863 VLEQVEAYQDEAR--EALATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQAQW--- 917
Query: 584 LDFIRQVTAEA------VILQ------------IEREKLFIDLSGVLAAAMRWEERAADI 625
LD ++Q A + VI+Q +K +L +L A RWEE+A
Sbjct: 918 LDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAHFC 977
Query: 626 L--IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPA 682
L K E IIR +++I V LP++ ++ ++ A++W+ + E+ +
Sbjct: 978 LEARQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDEIQNGDHYPC--- 1034
Query: 683 SCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L+ L+ LV+ + L + L+E +LE + W+ AS
Sbjct: 1035 ------LDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKAS 1073
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 474 CSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKD 533
C EA R T+E +++E + V++P ++ LK+ + A WIA +++I NG D
Sbjct: 977 CLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDEIQ---NG--D 1030
Query: 534 QHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALKA 577
+ +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1031 HYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1075
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 139/235 (59%), Gaps = 7/235 (2%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+LFD+QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G
Sbjct: 539 MKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQG 598
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNF ADWLP G + Y++ + V SHEEL+C +A LD ++ + +
Sbjct: 599 YNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHK 658
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
E+ + +ER R+ L KG+ ++ R+ E + +E CI C+ +LSA+AC
Sbjct: 659 EMFIMVQEERRLRKALLEKGVTEAE----REAFELLPDDER-QCIKCKTTCFLSALACYD 713
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLR 233
P VCL H LC+C + + +L YR+TL EL + + + + +N +R
Sbjct: 714 CPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVR 768
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 48/345 (13%)
Query: 408 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 464
KL R S W + VR + + + L LESEA + + P +++L ++ +
Sbjct: 752 KLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRF--PNSELLQRLKNCL 809
Query: 465 GQAESCRARCSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 523
+ E+C A+ + G ++ + T +L L EL M L A+ I + D
Sbjct: 810 SEVEACIAQVLGLVSGQVARMDTPQLTLTELRVLLEQMGSLPC-------AMHQIGDVKD 862
Query: 524 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 583
+L + Q + L + LR ++ + VE+ +AH ++ ++
Sbjct: 863 VLEQVEAY--QAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQAQW--- 917
Query: 584 LDFIRQVTAEA------VILQ------------IEREKLFIDLSGVLAAAMRWEERAADI 625
LD ++Q A + VI+Q +K +L +L A RWEE+A
Sbjct: 918 LDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAHFC 977
Query: 626 L--IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKN-SELFLASAFAVAPA 682
L K E IIR +++I V LP++ ++ ++ A++W+ + E+ +
Sbjct: 978 LEARQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDEIQNGDHYPC--- 1034
Query: 683 SCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
L+ L+ LV+ + L + L+E +LE + W+ AS
Sbjct: 1035 ------LDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKAS 1073
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 474 CSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKD 533
C EA R T+E +++E + V++P ++ LK+ + A WIA +++I NG D
Sbjct: 977 CLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDEIQ---NG--D 1030
Query: 534 QHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALKA 577
+ +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1031 HYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1075
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 124/213 (58%), Gaps = 7/213 (3%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ + P+LF +QPDLL QLVT++NP++L+ N VPV+ Q G FVITFPR+YHAGFN G
Sbjct: 672 MKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQG 731
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKR 118
N AEAVNFAPADWL G + Y + V SH+EL+C +A + L ++
Sbjct: 732 YNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYI 791
Query: 119 ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRC 178
++ + E+ R+ L G+ ++ R+ E V +E C C +LSAVAC C
Sbjct: 792 DMAEMVDTEKKLRKSLLEWGVTRAE----RRAFELVNDDER-HCQECNTTCFLSAVACEC 846
Query: 179 RPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 211
VCL H+ LC C K L+YR+TL E+
Sbjct: 847 NDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEM 879
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 148/346 (42%), Gaps = 37/346 (10%)
Query: 407 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 466
+KL + S + W R + P ++ + L +L EA K + +L+ +
Sbjct: 884 QKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKF---PSSLLIDRLNA 940
Query: 467 AESCRARCSEALR--GSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWI---ARL 521
A +C ++ G ++T QE + + M ELEL Q + I A +
Sbjct: 941 AAVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV 1000
Query: 522 NDILV----------NINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELK--KAH 569
++LV + + EL ++ EG+SLRI++ L L++ LK K +
Sbjct: 1001 RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLLQKRLKQCKWY 1060
Query: 570 CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFID-----LSGVLAAAMRWEERAAD 624
R + L+ +K+ ++ + A ++ ++D L + A WE +AA
Sbjct: 1061 KRSQGLRETSSKLTYQDVKNLLHIAAA-DLDPTDPYVDKEMRKLQQIGADIEAWESQAAK 1119
Query: 625 I---LIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 681
L + ++ E E ++++ DI +PS +++ + A+ WL+ E +
Sbjct: 1120 YFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNH---- 1175
Query: 682 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 727
+ +L+ ++ + + I L+E + ++ +N+ +W+++ +
Sbjct: 1176 ----VTYCHTLEAMIERGLNIPIQLEELSRMQGHLNSAHQWKDNTA 1217
Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 986 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1032
+C C E L+C C D YH CL P E ++CP C
Sbjct: 450 ICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGE-WLCPRC 495
>sp|Q8GUI6|JMJ14_ARATH Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana
GN=JMJ14 PE=1 SV=1
Length = 954
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 127/230 (55%), Gaps = 18/230 (7%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ LPDLF+ QPDLL QLVT L+P +L E GVPVY +Q G F++TFP++YH+GFN G
Sbjct: 344 MKKRLPDLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCG 403
Query: 61 LNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKS--------DLDSKV 112
NCAEAVN AP DWL HG + Y + + + LSH++LL A L K
Sbjct: 404 FNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKK 463
Query: 113 SPYLKR--------ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCII 164
+P + R LL K+R+ E + + RK + + C +
Sbjct: 464 TPVIARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSL--RKMEGDFDNKRERECFL 521
Query: 165 CRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 214
C L++SA +C+C P F CL H + LC C+++ ++L RHTL EL+ L
Sbjct: 522 CFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDELWAL 571
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans
GN=rbr-2 PE=1 SV=2
Length = 1477
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 115/214 (53%), Gaps = 11/214 (5%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAGFN GLN AE
Sbjct: 554 PGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLNFAE 613
Query: 66 AVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSPYLKRELLRV 123
AVNFAP DWL G + Y + V SH+ELL V A L +S EL+R+
Sbjct: 614 AVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEELIRI 673
Query: 124 YTKERMWRERLWRKGII--KSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPA 181
Y K++M RE L R G+ + + K P +E +C C+ L++ A+ C +
Sbjct: 674 YEKQKMLRELLARLGVSNRQMQQVMFEKIP-----DEQRSCRFCKTTLFMCALVCN-KHK 727
Query: 182 AFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 214
C+EH +HLC C T+ YR L +L ++
Sbjct: 728 KMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae
GN=rbr-2 PE=3 SV=2
Length = 1482
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 116/219 (52%), Gaps = 19/219 (8%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
P L Q DL + T NPS+L GVP+YSV Q G FVITFPR+YHAG+N GLN AE
Sbjct: 557 PGLTGRQRDLFHHMTTAANPSLLRSLGVPIYSVHQNAGEFVITFPRAYHAGYNEGLNFAE 616
Query: 66 AVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKS----DLDSKVSPYLKRELL 121
AVNFAP DWL G Y + V SH+ELL + ++ L + ++ Y EL
Sbjct: 617 AVNFAPIDWLAKGRECVQSYSNVRRYLVFSHDELLFKMIEAMDRLGLSTTLAAY--DELK 674
Query: 122 RVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDP----TCIICRQYLYLSAVACR 177
RV K++ R+ + + G+ P + E V E+ P +C C+ L++ A+ C
Sbjct: 675 RVIEKQKRLRQFIAQLGV-------PARNVEQVAFEKIPDEQRSCRFCKTTLFMCALICN 727
Query: 178 CRPAAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDLF 215
+ C+EH +HLC+ C + YR+ + L LF
Sbjct: 728 -KHKRMTCVEHHDHLCKTCTPKDYKYQYRYEIDNLTHLF 765
>sp|Q9US53|JMJ2_SCHPO Jumonji/ARID domain-containing protein 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=jmj2 PE=4 SV=1
Length = 715
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 107/202 (52%), Gaps = 28/202 (13%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
PDL Q DLL+QL TM+NP L + GV VY + Q P FVITFP+S+HAG N G N E
Sbjct: 508 PDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINE 567
Query: 66 AVNFAPADWLPHGGF--GADLYQQYHKAAVLSHEELLCVVAK--------SDLDSKVSPY 115
AVNFAP DWL +G G YQ K VLSH+ L+ +A S+L V
Sbjct: 568 AVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLATNPASEISVSELRPWVHEA 627
Query: 116 LKREL-LRVYTKERM-WRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSA 173
+KREL +R+ + R +E L+R E + E+ C C+ + Y S
Sbjct: 628 VKRELGIRIMIRGRYDLKEILYR---------------ELMEDAENWQCQHCKAFSYFSQ 672
Query: 174 VACRCRPAAFVCLEHWEHLCEC 195
VAC C+ VC H E+LC+C
Sbjct: 673 VACSCKSIT-VCPLHIEYLCKC 693
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 6 PDLFDAQPDLLFQLVTMLNP--SVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNC 63
PDLF QPDLL QLVT+++P ++G+PVY +Q+P ++ITFP+ YHAGFN G N
Sbjct: 467 PDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNF 526
Query: 64 AEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVV 103
EAVNF WLP+G Y+ KA V +L+ V
Sbjct: 527 NEAVNFTIDFWLPYGFGAITDYKLTQKACVFDMFDLMINV 566
>sp|B2RXH2|KDM4E_HUMAN Lysine-specific demethylase 4E OS=Homo sapiens GN=KDM4E PE=1 SV=1
Length = 506
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 2 RSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGL 61
R PD+ L V +++P+VL ENG+P + QE G F++TFP YHAGFN G
Sbjct: 225 RELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGF 284
Query: 62 NCAEAVNFAPADWLPHG 78
NCAEA+NFA W+ +G
Sbjct: 285 NCAEAINFATPRWIDYG 301
>sp|Q3U2K5|KDM4D_MOUSE Lysine-specific demethylase 4D OS=Mus musculus GN=Kdm4d PE=2 SV=2
Length = 510
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W
Sbjct: 238 FLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 297
Query: 75 LPHG 78
+ +G
Sbjct: 298 IDYG 301
>sp|A1A5Q5|KDM4D_RAT Lysine-specific demethylase 4D OS=Rattus norvegicus GN=Kdm4d PE=2
SV=1
Length = 510
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W
Sbjct: 238 FLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 297
Query: 75 LPHG 78
+ +G
Sbjct: 298 IDYG 301
>sp|Q6B0I6|KDM4D_HUMAN Lysine-specific demethylase 4D OS=Homo sapiens GN=KDM4D PE=1 SV=3
Length = 523
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L V +++P+VL ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W
Sbjct: 241 FLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 300
Query: 75 LPHG 78
+ +G
Sbjct: 301 IDYG 304
>sp|Q6BDA0|ELF6_ARATH Probable lysine-specific demethylase ELF6 OS=Arabidopsis thaliana
GN=ELF6 PE=1 SV=1
Length = 1340
Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 16 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 75
L + T+++P ++V +G+P ++Q PG FV+TFPRSYH GF+ G NC EA NF WL
Sbjct: 358 LGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWL 417
Query: 76 PHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELL------RVYTKERM 129
A + +LSH++LL ++ S + + R LL R+ ++R
Sbjct: 418 NVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSR-----VPRSLLPGGRSSRLRDRQRE 472
Query: 130 WRERLWRKGIIK 141
RE L ++ ++
Sbjct: 473 EREFLVKRAFVE 484
>sp|Q9H3R0|KDM4C_HUMAN Lysine-specific demethylase 4C OS=Homo sapiens GN=KDM4C PE=1 SV=2
Length = 1056
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 75 LPHG 78
+ +G
Sbjct: 299 IDYG 302
>sp|Q8VCD7|KDM4C_MOUSE Lysine-specific demethylase 4C OS=Mus musculus GN=Kdm4c PE=1 SV=1
Length = 1054
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 75 LPHG 78
+ +G
Sbjct: 299 IDYG 302
>sp|Q8BW72|KDM4A_MOUSE Lysine-specific demethylase 4A OS=Mus musculus GN=Kdm4a PE=1 SV=3
Length = 1064
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 75 LPHG 78
+ +G
Sbjct: 297 IEYG 300
>sp|Q5RD88|KDM4A_PONAB Lysine-specific demethylase 4A OS=Pongo abelii GN=KDM4A PE=2 SV=1
Length = 1064
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 75 LPHG 78
+ +G
Sbjct: 297 IEYG 300
>sp|O75164|KDM4A_HUMAN Lysine-specific demethylase 4A OS=Homo sapiens GN=KDM4A PE=1 SV=2
Length = 1064
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++P +L + G+P V QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 75 LPHG 78
+ +G
Sbjct: 297 IEYG 300
>sp|Q91VY5|KDM4B_MOUSE Lysine-specific demethylase 4B OS=Mus musculus GN=Kdm4b PE=1 SV=1
Length = 1086
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 75 LPHG 78
+ +G
Sbjct: 298 IDYG 301
>sp|O94953|KDM4B_HUMAN Lysine-specific demethylase 4B OS=Homo sapiens GN=KDM4B PE=1 SV=4
Length = 1096
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L +T+++P +L + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 75 LPHG 78
+ +G
Sbjct: 298 IDYG 301
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 53/312 (16%)
Query: 19 LVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
L +++PS L+ENG ++ P F++ P SYH GF+ G + E+VNFA +W+ G
Sbjct: 507 LPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDG 566
Query: 79 GFGADL--YQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWRERLWR 136
+ + + + +S+E ++ + S +P E L ++ + E +
Sbjct: 567 LLNSSISVLKSMRIPSSVSYEAVIISMVLSK-----NPCFSSEWLIKCFEDMIANESASK 621
Query: 137 KGIIKSTP-MGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCEC 195
I+K P + K V E C C+Q +LS + C P F+CL
Sbjct: 622 NEIMKLVPNIQALKLESSVPLE--IRCSNCKQPCFLSFMQCH-EPKKFICLGDCVKEVSL 678
Query: 196 KTRKLHLLYR---HTLAELYDLFLTVDRNSSEETSESNNLRRQISSSNRPTTLTKKVKGV 252
L YR H L+ L + F+++ R E T N LR +S+S +P
Sbjct: 679 NATSWMLFYRWDVHELSNLAERFVSLIRGPEEWT---NRLRSVLSTSPKP---------- 725
Query: 253 RVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRR 312
LKVL+ +LL +AE+ + E +RD V
Sbjct: 726 --------------QLKVLK---------SLLVDAEKAMLTTPETVNLRDFVQN---ANS 759
Query: 313 WAEGIRDCLHKA 324
W + + +CL A
Sbjct: 760 WIDSVNECLKVA 771
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 1231 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK 1286
E L + + ++C CR P + MI C C EWYH C+K+ L E + C C
Sbjct: 1085 EGRLTIRKKKGCIFCFCRLP-ESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICD 1143
Query: 1287 -----PQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIANN 1341
P+ +++ + + L + PK T + +K+ Q+M A+A+N
Sbjct: 1144 YRVEIPRLSNRPKLEDLQSLYKDVKLLPFQ---PKETETLRKVVDLASKFRQEMQALAHN 1200
Score = 33.9 bits (76), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 55/336 (16%)
Query: 362 LQNYAEEARSLIQ-------EINAALSACSK--ISELELLYSRASGLPICIVESEKLSQR 412
L N AE SLI+ + + LS K + L+ L A + E+ L
Sbjct: 694 LSNLAERFVSLIRGPEEWTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDF 753
Query: 413 ISSAKVWRDSVRKCIS--------NKCPAAIEID-------------VLYKLESEALDLK 451
+ +A W DSV +C+ +K P + VL+K+ + +
Sbjct: 754 VQNANSWIDSVNECLKVASLKRKKDKKPPLFKAHDHWNNTSNLKDSAVLFKVLQTSRSMA 813
Query: 452 IDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYH 511
E + + + R R + G + T + LL E +PEL ++++Y
Sbjct: 814 FTCQEIENMKQKAFDLLEFRNRLINSFSGPLDKNTCQRLLTEAELLGFTIPELGIIQKYL 873
Query: 512 SDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCR 571
W+ D+ + + + ++ L + G S I D+ ++ + K
Sbjct: 874 IQ-FEWL----DMFYSFETTRTTDSDLERL---ITYGVSAGIPEDNDYMIFAKAMKGRAE 925
Query: 572 EKALKACDT----KMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILI 627
+ DT + D + + EA+ L + +E LF + G+L A +I
Sbjct: 926 IWENQVYDTLSKSNISYDKLSLLRDEAMNLCVNKE-LFSKVVGIL-------NNAEEIKN 977
Query: 628 HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAK 663
A +CE R+ + F + PS+DEV+ +++A+
Sbjct: 978 KIATLCE-----RSQEKDFALRPSIDEVKEALASAE 1008
>sp|Q9V6L0|KDM4B_DROME Probable lysine-specific demethylase 4B OS=Drosophila melanogaster
GN=Kdm4B PE=3 SV=3
Length = 590
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 16 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 75
L +T+++P +L ++ VPV + QE G +ITFP YHAGFN G NCAE+ NFA W+
Sbjct: 236 LRHKMTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWI 295
Query: 76 PHG 78
+G
Sbjct: 296 EYG 298
>sp|Q9STM3|REF6_ARATH Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6
PE=1 SV=1
Length = 1360
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 16 LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 75
L + T+++P V V+ G+P ++Q PG FV+TFP +YH+GF+ G N EA N A +WL
Sbjct: 299 LGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWL 358
Query: 76 PHGGFGADLYQQYHKAAVLSHEELL---CVVAKSDLDSKVSPYLKRELLRVYTKERMWRE 132
A + ++SH +LL + S + + ++P K R+ K R E
Sbjct: 359 RMAKDAAIRRAAINYPPMVSHLQLLYDFVLALGSRVPTSINP--KPRSSRLKDKARSEGE 416
Query: 133 RLWRKGIIKS 142
RL +K +++
Sbjct: 417 RLTKKLFVQN 426
>sp|P39956|RPH1_YEAST DNA damage-responsive transcriptional repressor RPH1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RPH1 PE=1 SV=1
Length = 796
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 1 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 60
M+ P+ P+ L + + +P +L ENG+ ++ G F+IT+P YHAGFN+G
Sbjct: 270 MQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYG 329
Query: 61 LNCAEAVNFAPADWLPHG 78
N AE+VNFA +WLP G
Sbjct: 330 YNLAESVNFALEEWLPIG 347
>sp|Q9U297|KDM4_CAEEL Lysine-specific demethylase 4 OS=Caenorhabditis elegans GN=jmjd-2
PE=3 SV=2
Length = 922
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 15 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 74
L ++ P +L + G+P +++Q P F+ITFPR YH GFN G N AE+ NFA W
Sbjct: 317 FLRHKTYLVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRW 376
Query: 75 LPHG 78
+ +G
Sbjct: 377 IDYG 380
>sp|Q9V333|KDM4A_DROME Probable lysine-specific demethylase 4A OS=Drosophila melanogaster
GN=Kdm4A PE=1 SV=1
Length = 495
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 20 VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 78
+TM++P VL ++ +P + QE G +ITFP YHAGFN G N AE+ NFA W+ +G
Sbjct: 249 MTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYG 307
>sp|Q62315|JARD2_MOUSE Protein Jumonji OS=Mus musculus GN=Jarid2 PE=1 SV=1
Length = 1234
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 10 DAQPDL-LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVN 68
+ P L + + M++P VL + G+ V+ +Q+ G FV+ FP S+ + G N +E V+
Sbjct: 969 NGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVH 1028
Query: 69 FAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR---ELLRVYT 125
FA W G A ++ H A S E+LL +A+++ + P L L +
Sbjct: 1029 FATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRD 1088
Query: 126 KERMWRERLWRKGIIKSTPMG--------------PRKCPEYVGTEEDPTCIICRQYLYL 171
E R L+ G+ S G PRK + +E C IC+ YL
Sbjct: 1089 TELRQRRLLFEAGLHSSARYGSHDGNSTVADGKKKPRKWLQLETSER--RCQICQHLCYL 1146
Query: 172 SAVACRCRPAAFVCLE----HWEHLCECKTRKLHLLYRHTLAELYDL 214
S V F CLE H E C R L L+YR+ ++ L
Sbjct: 1147 SMVVQENENVVF-CLECALRHVEKQKSC--RGLKLMYRYDEEQIISL 1190
>sp|Q92833|JARD2_HUMAN Protein Jumonji OS=Homo sapiens GN=JARID2 PE=1 SV=2
Length = 1246
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 10 DAQPDL-LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVN 68
+ P L + + M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+
Sbjct: 971 NGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVH 1030
Query: 69 FAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR---ELLRVYT 125
FA W G A ++ H A S E+LL +A+++ + P L L +
Sbjct: 1031 FATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRD 1090
Query: 126 KERMWRERLWRKGIIKSTPMG--------------PRKCPEYVGTEEDPTCIICRQYLYL 171
E R +L+ G+ S G PRK + +E C IC+ YL
Sbjct: 1091 TELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSER--RCQICQHLCYL 1148
Query: 172 SAVACRCRPAAFVCLE----HWEHLCECKTRKLHLLYRHTLAELYDL 214
S V F CLE H E C R L L+YR+ ++ L
Sbjct: 1149 SMVVQENENVVF-CLECALRHVEKQKSC--RGLKLMYRYDEEQIISL 1192
>sp|Q9UT79|MSC1_SCHPO Multicopy suppressor of chk1 protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=msc1 PE=4 SV=1
Length = 1588
Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 52/306 (16%)
Query: 6 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 65
P +P+ L + +L S+L+ NG+ V + +Q FVIT P +Y+ + G + +E
Sbjct: 565 PSFIQEKPETLIKSKILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSE 624
Query: 66 AVNFAPADWLP--HGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKV-SPYLKRELLR 122
+V FA +W+ H ++Y+ H +A S + +L +A + LD V S Y L
Sbjct: 625 SVPFATKEWIQDMHAENSFNMYKNLHISAPFSLDHIL--LANATLDKTVHSAY----WLM 678
Query: 123 VYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPT---CIICRQYLYLSAVACRCR 179
K+R+ RE R K P+ ++ T + + C C+ + YL+++ +
Sbjct: 679 TCLKDRVDRELTLRNEFRKRHPLL-----TWIPTPLESSVMACAFCKTFAYLASIEEK-N 732
Query: 180 PAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISSS 239
CL H + L +L R+ L + V + + + N + + S
Sbjct: 733 GTKTACLSHKDECFPNTDSDLTVLVRYDDNALLAAYSKVVERAHKADTWLENYKEALGSD 792
Query: 240 N-RPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMD 298
N RP SLKVL+ TLL EAE E+
Sbjct: 793 NSRP------------------------SLKVLK---------TLLNEAETICCPLQEVS 819
Query: 299 AVRDMV 304
VR++V
Sbjct: 820 LVRNLV 825
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 1158 TKPTIGQIQNYLKEGLLMNISPKDH-YRQKLMELNRIGSQWADVAKKVVLDSGA------ 1210
++PTI + + L E + P+++ QKL+ +W K++ + A
Sbjct: 1075 SRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTY---EWVRRGKRLFGKANAPLEIFN 1131
Query: 1211 -----LSLDKVFELIAEGENLPVYLEKELKSLRARS---MLYCICRKPYDEKAMIACYQC 1262
+ ++ EG + P ++ E + YC CR+P + MI C C
Sbjct: 1132 QHLEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSDPSDFHYCFCRQP-EAGMMIECELC 1190
Query: 1263 DEWYHIDCVKL----LSAPEIYICAACKPQAE 1290
EWYH C+K+ L A E +IC C + E
Sbjct: 1191 HEWYHAKCMKMSKKKLRADEKFICPICDYRVE 1222
Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 1245 CICRKPYD-EKAMIACYQCDEWYHIDCVKL----LSAPEIYICAAC 1285
C+CR+P+ + C+ C EW+H +CV L +S Y C C
Sbjct: 1457 CLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDC 1502
>sp|Q5F363|JARD2_CHICK Protein Jumonji OS=Gallus gallus GN=JARID2 PE=2 SV=1
Length = 1233
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 10 DAQPDL-LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVN 68
+ P L + + M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+
Sbjct: 960 NGTPGLEMLESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVH 1019
Query: 69 FAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYL---KRELLRVYT 125
FA W G A ++ A S E+LL +A ++ + P L L +
Sbjct: 1020 FATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRD 1079
Query: 126 KERMWRERLWRKGIIKSTPMG--------------PRKCPEYVGTEEDPTCIICRQYLYL 171
E R +L+ G+ S G PRK + +E C IC+ YL
Sbjct: 1080 TELRQRRQLYEAGLHSSARYGSHDSSSTAMDGKKKPRKWLQLETSER--RCQICQHLCYL 1137
Query: 172 SAVACRCRPAAFVCLE----HWEHLCECKTRKLHLLYRHTLAELYDL 214
S V F CLE H E C R L ++YR+ ++ L
Sbjct: 1138 SMVVQENENVVF-CLECALRHVEKQKSC--RGLKMMYRYDEEQIISL 1181
>sp|Q1LVC2|JARD2_DANRE Protein Jumonji OS=Danio rerio GN=jarid2b PE=3 SV=2
Length = 1319
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 10 DAQPDL-LFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVN 68
+ P L + + M++P VL G+ V+ +Q+ G FV+ FP ++ + G + +E V+
Sbjct: 1041 NGTPGLEMLEKNVMISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVH 1100
Query: 69 FAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLD-------SKVSPYLKRELL 121
FA W+ G A + A S E+LL +A ++ S +S LK +L
Sbjct: 1101 FATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLLK-DLR 1159
Query: 122 RVYTKERMWRERLWRKGIIKS----------TPMGPRKCP-EYVGTE-EDPTCIICRQYL 169
+ K+ R+ L+ G++ S +P RK P +++ E + C +C+
Sbjct: 1160 NIEMKQ---RQELYEAGLLSSARYCTHDHNQSPADTRKKPRKWLALESSERRCQMCQHLC 1216
Query: 170 YLSAVACRCRPAAFVCLEHWEHLCECKT--RKLHLLYRHTLAELYDLFLTV 218
YLS V F CLE H E R L ++YR+ ++ L V
Sbjct: 1217 YLSMVVQENENVVF-CLECALHYVEKHKNCRGLKMMYRYDEEQINSLVNQV 1266
>sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4
Length = 2256
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 1243 LYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--------PEIYICAAC 1285
LYCICR+P++ + MI C +C+EW+H DCV + A E YIC C
Sbjct: 266 LYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 316
>sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5
Length = 2240
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 1241 SMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--------PEIYICAAC 1285
+ LYCICR+P++ + MI C +C+EW+H DCV + A E YIC C
Sbjct: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
K + + LYCIC+ PYDE K I C +C WYH CV +L + + Y+C C+
Sbjct: 2860 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 2916
>sp|Q03214|ECM5_YEAST Protein ECM5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ECM5 PE=1 SV=1
Length = 1411
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 1234 LKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE----IYICAACKP 1287
L+S R YC CR+ + AM+ C C EWYH+DC+ L P+ +++C+ C P
Sbjct: 1230 LESCSKRQTKYCFCRRVEEGTAMVECEICKEWYHVDCISNGELVPPDDPNVLFVCSICTP 1289
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 11 AQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 70
+Q D +F+ P+ ++ NG+ +Y QE G+++ FP+++ G ++ FA
Sbjct: 626 SQSDFIFE------PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFA 679
Query: 71 PADWL 75
P+ WL
Sbjct: 680 PSSWL 684
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 1235 KSLRARSMLYCICRKPYDEKAM-IACYQCDEWYHIDCVKLLSAP----EIYICAACK 1286
K R LYC CR+PYDE I C +C +W+H CV +L + + Y+C C+
Sbjct: 2488 KRARETQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQ 2544
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 1235 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLSAPEI----YICAACK 1286
K R + LYCICR PYD+ K + C C W+H DCV + +IC CK
Sbjct: 2432 KLTRKKEKLYCICRTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSEFICIDCK 2488
>sp|Q5RHD1|KDM7A_DANRE Lysine-specific demethylase 7A OS=Danio rerio GN=jhdm1da PE=2 SV=2
Length = 875
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 1239 ARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLL----SAPEIYICAACKP 1287
A + LYC+CR+PYD + MI C C +W+H CV+++ + ++Y C C+P
Sbjct: 2 AAAPLYCVCRQPYDVNRFMIECDICKDWFHGSCVQVVEHHAADIDVYHCPNCEP 55
>sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subunit 3 OS=Xenopus laevis
GN=taf3 PE=2 SV=1
Length = 845
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 1247 CRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---EIYICAACK 1286
C KP D MI C QCD+WYH CV + +AP E + C C+
Sbjct: 787 CNKPDDGSPMIGCDQCDDWYHWPCVGINAAPPEDEQWFCTKCE 829
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,977,766
Number of Sequences: 539616
Number of extensions: 20341897
Number of successful extensions: 54565
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 53890
Number of HSP's gapped (non-prelim): 705
length of query: 1383
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1253
effective length of database: 121,419,379
effective search space: 152138481887
effective search space used: 152138481887
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)